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<tr> <th>  </th> <th> ID </th> <th> GB_ACC </th> <th> SPOT_ID </th> <th> Species.Scientific.Name </th> <th> Annotation.Date </th> <th> Sequence.Type </th> <th> Sequence.Source </th> <th> Target.Description </th> <th> Representative.Public.ID </th> <th> Gene.Title </th> <th> Gene.Symbol </th> <th> ENTREZ_GENE_ID </th> <th> RefSeq.Transcript.ID </th> <th> Gene.Ontology.Biological.Process </th> <th> Gene.Ontology.Cellular.Component </th> <th> Gene.Ontology.Molecular.Function </th> <th> logFC </th> <th> AveExpr </th> <th> t </th> <th> P.Value </th> <th> adj.P.Val </th> <th> B </th>  </tr>
  <tr> <td> 206211_at </td> <td> 206211_at </td> <td> NM_000450 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000450.1 /DEF=Homo sapiens selectin E (endothelial adhesion molecule 1) (SELE), mRNA.  /FEA=mRNA /GEN=SELE /PROD=selectin E precursor /DB_XREF=gi:4506870 /UG=Hs.89546 selectin E (endothelial adhesion molecule 1) /FL=gb:M30640.1 gb:NM_000450.1 gb:M24736.1 </td> <td> NM_000450 </td> <td> selectin E </td> <td> SELE </td> <td> 6401 </td> <td> NM_000450 </td> <td> 0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0002523 // leukocyte migration involved in inflammatory response // traceable author statement /// 0002687 // positive regulation of leukocyte migration // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from mutant phenotype /// 0007159 // leukocyte cell-cell adhesion // inferred from direct assay /// 0007202 // activation of phospholipase C activity // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0030029 // actin filament-based process // inferred from direct assay /// 0032496 // response to lipopolysaccharide // traceable author statement /// 0034097 // response to cytokine // inferred from electronic annotation /// 0034612 // response to tumor necrosis factor // traceable author statement /// 0050727 // regulation of inflammatory response // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0050901 // leukocyte tethering or rolling // inferred from mutant phenotype /// 0070555 // response to interleukin-1 // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0033691 // sialic acid binding // inferred from direct assay /// 0043274 // phospholipase binding // inferred from direct assay /// 0070492 // oligosaccharide binding // inferred from direct assay </td> <td> -2894.10 </td> <td> 1511.50 </td> <td> -50.05 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 215223_s_at </td> <td> 215223_s_at </td> <td> W46388 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W46388 /FEA=EST /DB_XREF=gi:1331076 /DB_XREF=est:zc32c08.s1 /CLONE=IMAGE:324014 /UG=Hs.318885 superoxide dismutase 2, mitochondrial </td> <td> W46388 </td> <td> uncharacterized LOC100129518 /// superoxide dismutase 2, mitochondrial </td> <td> LOC100129518 /// SOD2 </td> <td> 6648 /// 100129518 </td> <td> NM_000636 /// NM_001024465 /// NM_001024466 /// NR_037166 </td> <td> 0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0000303 // response to superoxide // inferred from mutant phenotype /// 0001306 // age-dependent response to oxidative stress // inferred from electronic annotation /// 0001315 // age-dependent response to reactive oxygen species // inferred from mutant phenotype /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0003032 // detection of oxygen // inferred from electronic annotation /// 0003069 // vasodilation by acetylcholine involved in regulation of systemic arterial blood pressure // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006801 // superoxide metabolic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0008631 // intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from electronic annotation /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010042 // response to manganese ion // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010269 // response to selenium ion // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0019430 // removal of superoxide radicals // inferred from mutant phenotype /// 0022904 // respiratory electron transport chain // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032364 // oxygen homeostasis // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0034021 // response to silicon dioxide // inferred from electronic annotation /// 0042311 // vasodilation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0042743 // hydrogen peroxide metabolic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0048773 // erythrophore differentiation // inferred from electronic annotation /// 0050665 // hydrogen peroxide biosynthetic process // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from physical interaction /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071361 // cellular response to ethanol // inferred from electronic annotation /// 1902176 // negative regulation of intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0042645 // mitochondrial nucleoid // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0004784 // superoxide dismutase activity // inferred from direct assay /// 0004784 // superoxide dismutase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019825 // oxygen binding // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0030145 // manganese ion binding // traceable author statement /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -1308.25 </td> <td> 697.10 </td> <td> -36.38 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 212689_s_at </td> <td> 212689_s_at </td> <td> AA524505 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA524505 /FEA=EST /DB_XREF=gi:2265433 /DB_XREF=est:ng43g12.s1 /CLONE=IMAGE:937606 /UG=Hs.321707 KIAA0742 protein </td> <td> AA524505 </td> <td> lysine (K)-specific demethylase 3A </td> <td> KDM3A </td> <td> 55818 </td> <td> NM_001146688 /// NM_018433 /// XM_006712051 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007290 // spermatid nucleus elongation // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0033169 // histone H3-K9 demethylation // inferred from direct assay /// 0036123 // histone H3-K9 dimethylation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046293 // formaldehyde biosynthetic process // inferred from direct assay /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0001047 // core promoter binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from mutant phenotype /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from direct assay /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -600.35 </td> <td> 388.28 </td> <td> -32.94 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 209545_s_at </td> <td> 209545_s_at </td> <td> AF064824 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF064824.1 /DEF=Homo sapiens CARD-containing ICE associated kinase mRNA, complete cds.  /FEA=mRNA /PROD=CARD-containing ICE associated kinase /DB_XREF=gi:3290171 /UG=Hs.103755 receptor-interacting serine-threonine kinase 2 /FL=gb:BC004553.1 gb:AF027706.1 gb:AF064824.1 gb:AF078530.1 gb:NM_003821.1 </td> <td> AF064824 </td> <td> receptor-interacting serine-threonine kinase 2 </td> <td> RIPK2 </td> <td> 8767 </td> <td> NM_003821 /// XM_005251092 </td> <td> 0000187 // activation of MAPK activity // traceable author statement /// 0001961 // positive regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002250 // adaptive immune response // inferred from sequence or structural similarity /// 0002376 // immune system process // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // inferred from sequence or structural similarity /// 0007254 // JNK cascade // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from mutant phenotype /// 0031398 // positive regulation of protein ubiquitination // non-traceable author statement /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032722 // positive regulation of chemokine production // inferred from electronic annotation /// 0032727 // positive regulation of interferon-alpha production // non-traceable author statement /// 0032728 // positive regulation of interferon-beta production // non-traceable author statement /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032735 // positive regulation of interleukin-12 production // non-traceable author statement /// 0032743 // positive regulation of interleukin-2 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0033091 // positive regulation of immature T cell proliferation // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034134 // toll-like receptor 2 signaling pathway // inferred from direct assay /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0045087 // innate immune response // inferred from direct assay /// 0045087 // innate immune response // inferred from sequence or structural similarity /// 0045087 // innate immune response // traceable author statement /// 0045627 // positive regulation of T-helper 1 cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070427 // nucleotide-binding oligomerization domain containing 1 signaling pathway // inferred from electronic annotation /// 0070431 // nucleotide-binding oligomerization domain containing 2 signaling pathway // inferred from direct assay /// 0070555 // response to interleukin-1 // inferred from electronic annotation /// 0070671 // response to interleukin-12 // inferred from electronic annotation /// 0070673 // response to interleukin-18 // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071223 // cellular response to lipoteichoic acid // inferred from electronic annotation /// 0071224 // cellular response to peptidoglycan // inferred from electronic annotation /// 0071225 // cellular response to muramyl dipeptide // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from direct assay /// 0031982 // vesicle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030274 // LIM domain binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0050700 // CARD domain binding // inferred from direct assay /// 0050700 // CARD domain binding // inferred from physical interaction </td> <td> -682.78 </td> <td> 467.89 </td> <td> -29.65 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201998_at </td> <td> 201998_at </td> <td> AI743792 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI743792 /FEA=EST /DB_XREF=gi:5112080 /DB_XREF=est:wg53h11.x1 /CLONE=IMAGE:2368869 /UG=Hs.2554 sialyltransferase 1 (beta-galactoside alpha-2,6-sialytransferase) /FL=gb:NM_003032.1 </td> <td> AI743792 </td> <td> ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 </td> <td> ST6GAL1 </td> <td> 6480 </td> <td> NM_003032 /// NM_173216 /// NM_173217 /// XM_005247717 /// XM_005247719 /// XM_005247720 /// XM_006713734 </td> <td> 0006054 // N-acetylneuraminate metabolic process // inferred from direct assay /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0016266 // O-glycan processing // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // inferred from direct assay /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0097503 // sialylation // inferred from direct assay </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030173 // integral component of Golgi membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003835 // beta-galactoside alpha-2,6-sialyltransferase activity // inferred from direct assay /// 0008373 // sialyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> -1167.93 </td> <td> 772.64 </td> <td> -28.71 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 211506_s_at </td> <td> 211506_s_at </td> <td> AF043337 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF043337.1 /DEF=Homo sapiens interleukin 8 C-terminal variant (IL8) mRNA, complete cds.  /FEA=mRNA /GEN=IL8 /PROD=interleukin 8 C-terminal variant /DB_XREF=gi:12641914 /UG=Hs.624 interleukin 8 /FL=gb:AF043337.1 </td> <td> AF043337 </td> <td> chemokine (C-X-C motif) ligand 8 </td> <td> CXCL8 </td> <td> 3576 </td> <td> NM_000584 </td> <td> 0001525 // angiogenesis // traceable author statement /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from genetic interaction /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031623 // receptor internalization // inferred from direct assay /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042119 // neutrophil activation // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from expression pattern /// 0045091 // regulation of single stranded viral RNA replication via double stranded DNA intermediate // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from expression pattern /// 0050930 // induction of positive chemotaxis // inferred from genetic interaction /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0090023 // positive regulation of neutrophil chemotaxis // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0005153 // interleukin-8 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // traceable author statement </td> <td> -2875.30 </td> <td> 1518.22 </td> <td> -28.64 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 200768_s_at </td> <td> 200768_s_at </td> <td> BC001686 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001686.1 /DEF=Homo sapiens, methionine adenosyltransferase II, alpha, clone MGC:2907, mRNA, complete cds.  /FEA=mRNA /PROD=methionine adenosyltransferase II, alpha /DB_XREF=gi:12804546 /UG=Hs.77502 methionine adenosyltransferase II, alpha /FL=gb:BC001686.1 gb:BC001854.1 gb:NM_005911.1 </td> <td> BC001686 </td> <td> methionine adenosyltransferase II, alpha </td> <td> MAT2A </td> <td> 4144 </td> <td> NM_005911 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from direct assay /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0032259 // methylation // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0048269 // methionine adenosyltransferase complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004478 // methionine adenosyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 639.15 </td> <td> 415.73 </td> <td> 27.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 210592_s_at </td> <td> 210592_s_at </td> <td> M55580 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M55580.1 /DEF=Human spermidinespermine N1-acetyltransferase mRNA, complete cds. /FEA=mRNA /GEN=spermidinespermine N1-acetyltransferase /PROD=spermidinespermine N1-acetyltransferase /DB_XREF=gi:338335 /UG=Hs.28491 spermidinespermine N1-acetyltransferase /FL=gb:M55580.1 </td> <td> M55580 </td> <td> spermidine/spermine N1-acetyltransferase 1 </td> <td> SAT1 </td> <td> 6303 </td> <td> NM_002970 /// NR_027783 </td> <td> 0001525 // angiogenesis // inferred from expression pattern /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // traceable author statement /// 0006598 // polyamine catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009447 // putrescine catabolic process // inferred from electronic annotation /// 0032918 // spermidine acetylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004145 // diamine N-acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019809 // spermidine binding // inferred from electronic annotation </td> <td> -1205.95 </td> <td> 1152.20 </td> <td> -26.78 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202638_s_at </td> <td> 202638_s_at </td> <td> NM_000201 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000201.1 /DEF=Homo sapiens intercellular adhesion molecule 1 (CD54), human rhinovirus receptor (ICAM1), mRNA.  /FEA=mRNA /GEN=ICAM1 /PROD=intercellular adhesion molecule 1 precursor /DB_XREF=gi:4557877 /UG=Hs.168383 intercellular adhesion molecule 1 (CD54), human rhinovirus receptor /FL=gb:M24283.1 gb:J03132.1 gb:NM_000201.1 </td> <td> NM_000201 </td> <td> intercellular adhesion molecule 1 </td> <td> ICAM1 </td> <td> 3383 </td> <td> NM_000201 </td> <td> 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001910 // regulation of leukocyte mediated cytotoxicity // traceable author statement /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0002291 // T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell // inferred from mutant phenotype /// 0002457 // T cell antigen processing and presentation // inferred from electronic annotation /// 0002693 // positive regulation of cellular extravasation // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from direct assay /// 0007157 // heterophilic cell-cell adhesion // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from mutant phenotype /// 0007569 // cell aging // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0010477 // response to sulfur dioxide // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0022614 // membrane to membrane docking // inferred from expression pattern /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0031669 // cellular response to nutrient levels // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033627 // cell adhesion mediated by integrin // inferred from electronic annotation /// 0034698 // response to gonadotropin // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043200 // response to amino acid // inferred from electronic annotation /// 0044406 // adhesion of symbiont to host // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0046813 // receptor-mediated virion attachment to host cell // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // inferred from expression pattern /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0061028 // establishment of endothelial barrier // inferred from genetic interaction /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071312 // cellular response to alkaloid // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071347 // cellular response to interleukin-1 // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from direct assay </td> <td> 0001772 // immunological synapse // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005178 // integrin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> -2124.85 </td> <td> 1127.62 </td> <td> -26.26 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 217678_at </td> <td> 217678_at </td> <td> AA488687 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA488687 /FEA=EST /DB_XREF=gi:2216118 /DB_XREF=est:ab38f03.s1 /CLONE=IMAGE:843101 /UG=Hs.284235 ESTs </td> <td> AA488687 </td> <td> solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 </td> <td> SLC7A11 </td> <td> 23657 </td> <td> NM_014331 /// XM_005262875 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009636 // response to toxic substance // inferred from direct assay /// 0015813 // L-glutamate transport // traceable author statement /// 0035094 // response to nicotine // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation /// 0070527 // platelet aggregation // inferred from electronic annotation </td> <td> 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015327 // cystine:glutamate antiporter activity // traceable author statement </td> <td> -473.10 </td> <td> 596.20 </td> <td> -25.08 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202887_s_at </td> <td> 202887_s_at </td> <td> NM_019058 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019058.1 /DEF=Homo sapiens hypothetical protein (FLJ20500), mRNA. /FEA=mRNA /GEN=FLJ20500 /PROD=hypothetical protein /DB_XREF=gi:9506686 /UG=Hs.111244 hypothetical protein /FL=gb:AL136668.1 gb:NM_019058.1 </td> <td> NM_019058 </td> <td> DNA-damage-inducible transcript 4 </td> <td> DDIT4 </td> <td> 54541 </td> <td> NM_019058 </td> <td> 0001666 // response to hypoxia // inferred from direct assay /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from sequence or structural similarity /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0010801 // negative regulation of peptidyl-threonine phosphorylation // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0032007 // negative regulation of TOR signaling // inferred from mutant phenotype /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from sequence or structural similarity /// 0043241 // protein complex disassembly // inferred from electronic annotation /// 0045820 // negative regulation of glycolytic process // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 1901216 // positive regulation of neuron death // inferred from sequence or structural similarity /// 1902532 // negative regulation of intracellular signal transduction // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation </td> <td> 0071889 // 14-3-3 protein binding // inferred from electronic annotation </td> <td> -2003.15 </td> <td> 1191.75 </td> <td> -25.03 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 212037_at </td> <td> 212037_at </td> <td> BF508848 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF508848 /FEA=EST /DB_XREF=gi:11592146 /DB_XREF=est:UI-H-BI4-aor-e-06-0-UI.s1 /CLONE=IMAGE:3085907 /UG=Hs.44499 pinin, desmosome associated protein </td> <td> BF508848 </td> <td> pinin, desmosome associated protein </td> <td> PNN </td> <td> 5411 </td> <td> NM_002687 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005198 // structural molecule activity // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 244.80 </td> <td> 153.38 </td> <td> 24.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201976_s_at </td> <td> 201976_s_at </td> <td> NM_012334 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012334.1 /DEF=Homo sapiens myosin X (MYO10), mRNA. /FEA=mRNA /GEN=MYO10 /PROD=myosin X /DB_XREF=gi:11037056 /UG=Hs.61638 myosin X /FL=gb:NM_012334.1 gb:AF234532.1 gb:AF247457.2 </td> <td> NM_012334 </td> <td> myosin X </td> <td> MYO10 </td> <td> 4651 </td> <td> NM_012334 /// XM_005248306 /// XM_005248307 /// XM_006714475 </td> <td> 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from sequence or structural similarity /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0022409 // positive regulation of cell-cell adhesion // inferred from electronic annotation /// 0030705 // cytoskeleton-dependent intracellular transport // inferred from sequence or structural similarity /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051489 // regulation of filopodium assembly // inferred from mutant phenotype </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0032433 // filopodium tip // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0030507 // spectrin binding // inferred from direct assay /// 0030898 // actin-dependent ATPase activity // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from sequence or structural similarity /// 0060002 // plus-end directed microfilament motor activity // inferred from sequence or structural similarity </td> <td> -447.05 </td> <td> 698.17 </td> <td> -24.27 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 203973_s_at </td> <td> 203973_s_at </td> <td> NM_005195 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005195.1 /DEF=Homo sapiens CCAATenhancer binding protein (CEBP), delta (CEBPD), mRNA.  /FEA=mRNA /GEN=CEBPD /PROD=CCAATenhancer binding protein (CEBP), delta /DB_XREF=gi:4885130 /UG=Hs.76722 CCAATenhancer binding protein (CEBP), delta /FL=gb:M83667.1 gb:NM_005195.1 </td> <td> NM_005195 </td> <td> CCAAT/enhancer binding protein (C/EBP), delta </td> <td> CEBPD </td> <td> 1052 </td> <td> NM_005195 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -440.60 </td> <td> 241.75 </td> <td> -23.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 209921_at </td> <td> 209921_at </td> <td> AB040875 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB040875.1 /DEF=Homo sapiens hxCT mRNA for cystineglutamate exchanger, complete cds.  /FEA=mRNA /GEN=hxCT /PROD=cystineglutamate exchanger /DB_XREF=gi:13516845 /UG=Hs.6682 solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 /FL=gb:AB040875.1 </td> <td> AB040875 </td> <td> solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 </td> <td> SLC7A11 </td> <td> 23657 </td> <td> NM_014331 /// XM_005262875 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009636 // response to toxic substance // inferred from direct assay /// 0015813 // L-glutamate transport // traceable author statement /// 0035094 // response to nicotine // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation /// 0070527 // platelet aggregation // inferred from electronic annotation </td> <td> 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015327 // cystine:glutamate antiporter activity // traceable author statement </td> <td> -1101.10 </td> <td> 1067.58 </td> <td> -23.43 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 209239_at </td> <td> 209239_at </td> <td> M55643 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M55643.1 /DEF=Human factor KBF1 mRNA, complete cds. /FEA=mRNA /GEN=NF-kappa-B /PROD=factor KBF1 /DB_XREF=gi:189179 /UG=Hs.83428 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 (p105) /FL=gb:NM_003998.1 gb:M58603.1 gb:M55643.1 </td> <td> M55643 </td> <td> nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 </td> <td> NFKB1 </td> <td> 4790 </td> <td> NM_001165412 /// NM_003998 /// XM_005263029 /// XM_006714229 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001818 // negative regulation of cytokine production // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred by curator /// 0010884 // positive regulation of lipid storage // inferred by curator /// 0010956 // negative regulation of calcidiol 1-monooxygenase activity // inferred from direct assay /// 0010957 // negative regulation of vitamin D biosynthetic process // inferred by curator /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0032269 // negative regulation of cellular protein metabolic process // inferred by curator /// 0032375 // negative regulation of cholesterol transport // inferred by curator /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0045083 // negative regulation of interleukin-12 biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071316 // cellular response to nicotine // inferred from mutant phenotype /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071354 // cellular response to interleukin-6 // inferred from mutant phenotype /// 0071375 // cellular response to peptide hormone stimulus // inferred from mutant phenotype /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 1900127 // positive regulation of hyaluronan biosynthetic process // inferred from direct assay /// 2000630 // positive regulation of miRNA metabolic process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0033256 // I-kappaB/NF-kappaB complex // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000975 // regulatory region DNA binding // inferred from direct assay /// 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from direct assay /// 0001071 // nucleic acid binding transcription factor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay </td> <td> -403.93 </td> <td> 401.51 </td> <td> -23.40 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 207850_at </td> <td> 207850_at </td> <td> NM_002090 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002090.1 /DEF=Homo sapiens GRO3 oncogene (GRO3), mRNA. /FEA=mRNA /GEN=GRO3 /PROD=GRO3 oncogene /DB_XREF=gi:4504156 /UG=Hs.89690 GRO3 oncogene /FL=gb:M36821.1 gb:NM_002090.1 </td> <td> NM_002090 </td> <td> chemokine (C-X-C motif) ligand 3 </td> <td> CXCL3 </td> <td> 2921 </td> <td> NM_002090 </td> <td> 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0030593 // neutrophil chemotaxis // inferred from sequence or structural similarity /// 0060326 // cell chemotaxis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from sequence or structural similarity </td> <td> -1797.10 </td> <td> 907.27 </td> <td> -23.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201642_at </td> <td> 201642_at </td> <td> NM_005534 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005534.1 /DEF=Homo sapiens interferon gamma receptor 2 (interferon gamma transducer 1) (IFNGR2), mRNA.  /FEA=mRNA /GEN=IFNGR2 /PROD=interferon gamma receptor 2 (interferon gammatransducer 1) /DB_XREF=gi:5031782 /UG=Hs.177559 interferon gamma receptor 2 (interferon gamma transducer 1) /FL=gb:BC003624.1 gb:U05875.1 gb:U05877.1 gb:NM_005534.1 </td> <td> NM_005534 </td> <td> interferon gamma receptor 2 (interferon gamma transducer 1) </td> <td> IFNGR2 </td> <td> 3460 </td> <td> NM_005534 /// XM_005260969 </td> <td> 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004906 // interferon-gamma receptor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -781.87 </td> <td> 744.26 </td> <td> -23.03 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 207196_s_at </td> <td> 207196_s_at </td> <td> NM_006058 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006058.1 /DEF=Homo sapiens Nef-associated factor 1 (NAF1), mRNA. /FEA=mRNA /GEN=NAF1 /PROD=Nef-associated factor 1 /DB_XREF=gi:5174608 /UG=Hs.109281 Nef-associated factor 1 /FL=gb:NM_006058.1 </td> <td> NM_006058 </td> <td> TNFAIP3 interacting protein 1 </td> <td> TNIP1 </td> <td> 10318 </td> <td> NM_001252385 /// NM_001252386 /// NM_001252390 /// NM_001252391 /// NM_001252392 /// NM_001252393 /// NM_001258454 /// NM_001258455 /// NM_001258456 /// NM_006058 /// XM_005268355 /// XM_006714751 /// XM_006714752 </td> <td> 0002755 // MyD88-dependent toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0006412 // translation // traceable author statement /// 0006952 // defense response // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from mutant phenotype /// 0009101 // glycoprotein biosynthetic process // inferred from direct assay /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0050729 // positive regulation of inflammatory response // inferred from sequence or structural similarity /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0085032 // modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade // inferred from direct assay </td> <td> 0005622 // intracellular // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0051019 // mitogen-activated protein kinase binding // inferred from direct assay </td> <td> -772.35 </td> <td> 529.98 </td> <td> -22.82 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 207426_s_at </td> <td> 207426_s_at </td> <td> NM_003326 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003326.1 /DEF=Homo sapiens tumor necrosis factor (ligand) superfamily, member 4 (tax-transcriptionally activated glycoprotein 1, 34kD) (TNFSF4), mRNA.  /FEA=mRNA /GEN=TNFSF4 /PROD=tumor necrosis factor (ligand) superfamily,member 4 (tax-transcriptionally activated glycoprotein 1,34kD) /DB_XREF=gi:4507602 /UG=Hs.181097 tumor necrosis factor (ligand) superfamily, member 4 (tax-transcriptionally activated glycoprotein 1, 34kD) /FL=gb:NM_003326.1 </td> <td> NM_003326 </td> <td> tumor necrosis factor (ligand) superfamily, member 4 </td> <td> TNFSF4 </td> <td> 7292 </td> <td> NM_003326 /// XM_005245475 </td> <td> 0001816 // cytokine production // inferred from electronic annotation /// 0002215 // defense response to nematode // inferred from sequence or structural similarity /// 0002526 // acute inflammatory response // inferred from sequence or structural similarity /// 0002726 // positive regulation of T cell cytokine production // inferred from sequence or structural similarity /// 0002819 // regulation of adaptive immune response // inferred from sequence or structural similarity /// 0002830 // positive regulation of type 2 immune response // inferred from sequence or structural similarity /// 0002891 // positive regulation of immunoglobulin mediated immune response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0009615 // response to virus // inferred from sequence or structural similarity /// 0032689 // negative regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032700 // negative regulation of interleukin-17 production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032733 // positive regulation of interleukin-10 production // inferred from sequence or structural similarity /// 0032735 // positive regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032736 // positive regulation of interleukin-13 production // inferred from sequence or structural similarity /// 0032743 // positive regulation of interleukin-2 production // inferred from electronic annotation /// 0032753 // positive regulation of interleukin-4 production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0035708 // interleukin-4-dependent isotype switching to IgE isotypes // inferred from electronic annotation /// 0035709 // memory T cell activation // inferred from sequence or structural similarity /// 0035712 // T-helper 2 cell activation // inferred from sequence or structural similarity /// 0035713 // response to nitrogen dioxide // inferred from sequence or structural similarity /// 0035714 // cellular response to nitrogen dioxide // inferred from electronic annotation /// 0035783 // CD4-positive, alpha-beta T cell costimulation // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from electronic annotation /// 0042221 // response to chemical // inferred from electronic annotation /// 0043372 // positive regulation of CD4-positive, alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0043382 // positive regulation of memory T cell differentiation // inferred from sequence or structural similarity /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0045590 // negative regulation of regulatory T cell differentiation // inferred from sequence or structural similarity /// 0045626 // negative regulation of T-helper 1 cell differentiation // inferred from sequence or structural similarity /// 0045630 // positive regulation of T-helper 2 cell differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from sequence or structural similarity /// 0050710 // negative regulation of cytokine secretion // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from sequence or structural similarity /// 0050729 // positive regulation of inflammatory response // inferred from direct assay /// 0050871 // positive regulation of B cell activation // inferred from sequence or structural similarity /// 0051024 // positive regulation of immunoglobulin secretion // inferred from sequence or structural similarity /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071380 // cellular response to prostaglandin E stimulus // inferred from direct assay /// 0071954 // chemokine (C-C motif) ligand 11 production // inferred from sequence or structural similarity /// 1900281 // positive regulation of CD4-positive, alpha-beta T cell costimulation // inferred from sequence or structural similarity /// 2000525 // positive regulation of T cell costimulation // inferred from electronic annotation /// 2000568 // positive regulation of memory T cell activation // inferred from electronic annotation /// 2000570 // positive regulation of T-helper 2 cell activation // inferred from electronic annotation /// 2000572 // positive regulation of interleukin-4-dependent isotype switching to IgE isotypes // inferred from sequence or structural similarity </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0032813 // tumor necrosis factor receptor superfamily binding // inferred from sequence or structural similarity </td> <td> 352.92 </td> <td> 482.56 </td> <td> 22.77 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202859_x_at </td> <td> 202859_x_at </td> <td> NM_000584 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000584.1 /DEF=Homo sapiens interleukin 8 (IL8), mRNA. /FEA=mRNA /GEN=IL8 /PROD=interleukin 8 /DB_XREF=gi:10834977 /UG=Hs.624 interleukin 8 /FL=gb:NM_000584.1 gb:M17017.1 gb:M26383.1 </td> <td> NM_000584 </td> <td> chemokine (C-X-C motif) ligand 8 </td> <td> CXCL8 </td> <td> 3576 </td> <td> NM_000584 </td> <td> 0001525 // angiogenesis // traceable author statement /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from genetic interaction /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031623 // receptor internalization // inferred from direct assay /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042119 // neutrophil activation // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from expression pattern /// 0045091 // regulation of single stranded viral RNA replication via double stranded DNA intermediate // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from expression pattern /// 0050930 // induction of positive chemotaxis // inferred from genetic interaction /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0090023 // positive regulation of neutrophil chemotaxis // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0005153 // interleukin-8 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // traceable author statement </td> <td> -3476.58 </td> <td> 2196.44 </td> <td> -22.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201848_s_at </td> <td> 201848_s_at </td> <td> U15174 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U15174.1 /DEF=Homo sapiens BCL2adenovirus E1B 19kD-interacting protein 3 (BNIP3) mRNA, complete cds.  /FEA=mRNA /GEN=BNIP3 /PROD=BCL2adenovirus E1B 19kD-interacting protein 3 /DB_XREF=gi:558845 /UG=Hs.79428 BCL2adenovirus E1B 19kD-interacting protein 3 /FL=gb:AF002697.1 gb:U15174.1 gb:NM_004052.2 </td> <td> U15174 </td> <td> BCL2/adenovirus E1B 19kDa interacting protein 3 </td> <td> BNIP3 </td> <td> 664 </td> <td> NM_004052 </td> <td> 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0006309 // apoptotic DNA fragmentation // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006915 // apoptotic process // inferred from physical interaction /// 0008219 // cell death // inferred from sequence or structural similarity /// 0008626 // granzyme-mediated apoptotic signaling pathway // inferred from direct assay /// 0010508 // positive regulation of autophagy // traceable author statement /// 0010637 // negative regulation of mitochondrial fusion // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043068 // positive regulation of programmed cell death // inferred from direct assay /// 0043243 // positive regulation of protein complex disassembly // inferred from direct assay /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from direct assay /// 0045837 // negative regulation of membrane potential // inferred from direct assay /// 0046902 // regulation of mitochondrial membrane permeability // inferred from direct assay /// 0048102 // autophagic cell death // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from direct assay /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071279 // cellular response to cobalt ion // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from mutant phenotype /// 0072593 // reactive oxygen species metabolic process // inferred from direct assay /// 0090141 // positive regulation of mitochondrial fission // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0097193 // intrinsic apoptotic signaling pathway // inferred from electronic annotation /// 0097345 // mitochondrial outer membrane permeabilization // inferred from direct assay /// 1990144 // intrinsic apoptotic signaling pathway in response to hypoxia // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005635 // nuclear envelope // inferred from direct assay /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0031307 // integral component of mitochondrial outer membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from mutant phenotype </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0051020 // GTPase binding // inferred from physical interaction </td> <td> -443.10 </td> <td> 346.12 </td> <td> -21.51 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202912_at </td> <td> 202912_at </td> <td> NM_001124 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001124.1 /DEF=Homo sapiens adrenomedullin (ADM), mRNA. /FEA=mRNA /GEN=ADM /PROD=adrenomedullin /DB_XREF=gi:4501944 /UG=Hs.394 adrenomedullin /FL=gb:NM_001124.1 gb:D14874.1 </td> <td> NM_001124 </td> <td> adrenomedullin </td> <td> ADM </td> <td> 133 </td> <td> NM_001124 </td> <td> 0001570 // vasculogenesis // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002031 // G-protein coupled receptor internalization // inferred from direct assay /// 0006171 // cAMP biosynthetic process // inferred from direct assay /// 0006701 // progesterone biosynthetic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010460 // positive regulation of heart rate // inferred from electronic annotation /// 0019933 // cAMP-mediated signaling // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031102 // neuron projection regeneration // inferred from electronic annotation /// 0031623 // receptor internalization // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043116 // negative regulation of vascular permeability // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045906 // negative regulation of vasoconstriction // inferred from direct assay /// 0045909 // positive regulation of vasodilation // inferred from electronic annotation /// 0046879 // hormone secretion // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0060670 // branching involved in labyrinthine layer morphogenesis // inferred from electronic annotation /// 0060712 // spongiotrophoblast layer development // inferred from electronic annotation /// 0097084 // vascular smooth muscle cell development // inferred from electronic annotation /// 2001214 // positive regulation of vasculogenesis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031700 // adrenomedullin receptor binding // inferred from electronic annotation </td> <td> -562.98 </td> <td> 560.49 </td> <td> -21.17 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 209774_x_at </td> <td> 209774_x_at </td> <td> M57731 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M57731.1 /DEF=Human gro-beta mRNA, complete cds. /FEA=mRNA /GEN=gro-beta /PROD=cytokine gro-beta /DB_XREF=gi:183626 /UG=Hs.75765 GRO2 oncogene /FL=gb:M57731.1 gb:M36820.1 gb:NM_002089.1 </td> <td> M57731 </td> <td> chemokine (C-X-C motif) ligand 2 </td> <td> CXCL2 </td> <td> 2920 </td> <td> NM_002089 </td> <td> 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0060326 // cell chemotaxis // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inferred from electronic annotation </td> <td> -1943.52 </td> <td> 1025.91 </td> <td> -20.62 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202238_s_at </td> <td> 202238_s_at </td> <td> NM_006169 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006169.1 /DEF=Homo sapiens nicotinamide N-methyltransferase (NNMT), mRNA. /FEA=mRNA /GEN=NNMT /PROD=nicotinamide N-methyltransferase /DB_XREF=gi:5453789 /UG=Hs.76669 nicotinamide N-methyltransferase /FL=gb:BC000234.1 gb:U08021.1 gb:NM_006169.1 </td> <td> NM_006169 </td> <td> uncharacterized LOC101928916 /// nicotinamide N-methyltransferase </td> <td> LOC101928916 /// NNMT </td> <td> 4837 /// 101928916 </td> <td> NM_006169 /// XR_246479 /// XR_247717 /// XR_252975 </td> <td> 0006805 // xenobiotic metabolic process // traceable author statement /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032259 // methylation // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0008112 // nicotinamide N-methyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -560.67 </td> <td> 709.84 </td> <td> -20.56 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 208296_x_at </td> <td> 208296_x_at </td> <td> NM_014350 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014350.1 /DEF=Homo sapiens TNF-induced protein (GG2-1), mRNA. /FEA=mRNA /GEN=GG2-1 /PROD=TNF-induced protein /DB_XREF=gi:7657123 /UG=Hs.17839 TNF-induced protein /FL=gb:AF099936.1 gb:NM_014350.1 </td> <td> NM_014350 </td> <td> tumor necrosis factor, alpha-induced protein 8 </td> <td> TNFAIP8 </td> <td> 25816 </td> <td> NM_001077654 /// NM_001286813 /// NM_001286814 /// NM_001286815 /// NM_001286817 /// NM_014350 /// XM_006714584 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay </td> <td> 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from mutant phenotype </td> <td> -189.50 </td> <td> 138.25 </td> <td> -20.31 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 205476_at </td> <td> 205476_at </td> <td> NM_004591 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004591.1 /DEF=Homo sapiens small inducible cytokine subfamily A (Cys-Cys), member 20 (SCYA20), mRNA.  /FEA=mRNA /GEN=SCYA20 /PROD=small inducible cytokine subfamily A (Cys-Cys),member 20 /DB_XREF=gi:4759075 /UG=Hs.75498 small inducible cytokine subfamily A (Cys-Cys), member 20 /FL=gb:U64197.1 gb:U77035.1 gb:D86955.1 gb:NM_004591.1 </td> <td> NM_004591 </td> <td> chemokine (C-C motif) ligand 20 </td> <td> CCL20 </td> <td> 6364 </td> <td> NM_001130046 /// NM_004591 </td> <td> 0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0042466 // chemokinesis // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0060326 // cell chemotaxis // traceable author statement /// 2000406 // positive regulation of T cell migration // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inferred from electronic annotation </td> <td> -1614.83 </td> <td> 811.34 </td> <td> -19.97 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 216598_s_at </td> <td> 216598_s_at </td> <td> S69738 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:S69738.1 /DEF=MCP-1=monocyte chemotactic protein human, aortic endothelial cells, mRNA, 661 nt.  /FEA=mRNA /GEN=MCP-1 /PROD=MCP-1 /DB_XREF=gi:545464 /UG=Hs.303649 small inducible cytokine A2 (monocyte chemotactic protein 1, homologous to mouse Sig-je) </td> <td> S69738 </td> <td> chemokine (C-C motif) ligand 2 </td> <td> CCL2 </td> <td> 6347 </td> <td> NM_002982 </td> <td> 0000165 // MAPK cascade // inferred from mutant phenotype /// 0001525 // angiogenesis // traceable author statement /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002548 // monocyte chemotaxis // inferred from direct assay /// 0006468 // protein phosphorylation // traceable author statement /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007010 // cytoskeleton organization // inferred from direct assay /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0007259 // JAK-STAT cascade // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from direct assay /// 0009408 // response to heat // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from expression pattern /// 0009887 // organ morphogenesis // traceable author statement /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010574 // regulation of vascular endothelial growth factor production // inferred from electronic annotation /// 0010759 // positive regulation of macrophage chemotaxis // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0019079 // viral genome replication // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019725 // cellular homeostasis // traceable author statement /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0033552 // response to vitamin B3 // inferred from electronic annotation /// 0034351 // negative regulation of glial cell apoptotic process // inferred from direct assay /// 0035684 // helper T cell extravasation // inferred from sequence or structural similarity /// 0042493 // response to drug // inferred from electronic annotation /// 0043200 // response to amino acid // inferred from electronic annotation /// 0043491 // protein kinase B signaling // inferred from mutant phenotype /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0043615 // astrocyte cell migration // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from expression pattern /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048246 // macrophage chemotaxis // inferred from direct assay /// 0048247 // lymphocyte chemotaxis // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from electronic annotation /// 0050870 // positive regulation of T cell activation // inferred from sequence or structural similarity /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051770 // positive regulation of nitric-oxide synthase biosynthetic process // inferred from sequence or structural similarity /// 0060137 // maternal process involved in parturition // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from sequence or structural similarity /// 0071346 // cellular response to interferon-gamma // inferred from expression pattern /// 0071346 // cellular response to interferon-gamma // inferred from sequence or structural similarity /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071347 // cellular response to interleukin-1 // inferred from sequence or structural similarity /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from sequence or structural similarity /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay /// 0090265 // positive regulation of immune complex clearance by monocytes and macrophages // inferred from electronic annotation /// 0090280 // positive regulation of calcium ion import // inferred from direct assay /// 2000427 // positive regulation of apoptotic cell clearance // inferred from sequence or structural similarity /// 2000502 // negative regulation of natural killer cell chemotaxis // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0001664 // G-protein coupled receptor binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0031727 // CCR2 chemokine receptor binding // inferred from sequence or structural similarity /// 0031727 // CCR2 chemokine receptor binding // traceable author statement </td> <td> -3430.97 </td> <td> 2033.41 </td> <td> -19.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 211628_x_at </td> <td> 211628_x_at </td> <td> J04755 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:J04755.1 /DEF=Human ferritin H processed pseudogene, complete cds. /FEA=mRNA /GEN=FTHP1 /DB_XREF=gi:182512 /FL=gb:J04755.1 </td> <td> J04755 </td> <td> ferritin, heavy polypeptide 1 pseudogene 5 </td> <td> FTH1P5 </td> <td> 2509 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -1794.85 </td> <td> 3127.97 </td> <td> -19.77 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 218880_at </td> <td> 218880_at </td> <td> N36408 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N36408 /FEA=EST /DB_XREF=gi:1157550 /DB_XREF=est:yy33f03.s1 /CLONE=IMAGE:273053 /UG=Hs.325364 hypothetical protein FLJ23306 /FL=gb:NM_024530.1 </td> <td> N36408 </td> <td> FOS-like antigen 2 </td> <td> FOSL2 </td> <td> 2355 </td> <td> NM_005253 /// XM_005264231 /// XM_006711976 /// XM_006711977 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0008219 // cell death // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -284.22 </td> <td> 219.21 </td> <td> -19.71 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201761_at </td> <td> 201761_at </td> <td> NM_006636 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006636.2 /DEF=Homo sapiens methylene tetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase (MTHFD2), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=MTHFD2 /PROD=methylene tetrahydrofolate dehydrogenase (NAD+dependent), methenyltetrahydrofolate cyclohydrolase,precursor /DB_XREF=gi:13699869 /UG=Hs.154672 methylene tetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase /FL=gb:NM_006636.2 </td> <td> NM_006636 </td> <td> methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase </td> <td> MTHFD2 </td> <td> 10797 </td> <td> NM_001040409 /// NM_006636 /// NR_027405 /// XM_006711924 </td> <td> 0006730 // one-carbon metabolic process // not recorded /// 0008152 // metabolic process // inferred from electronic annotation /// 0009396 // folic acid-containing compound biosynthetic process // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation /// 0046653 // tetrahydrofolate metabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005739 // mitochondrion // not recorded /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005829 // cytosol // not recorded </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004329 // formate-tetrahydrofolate ligase activity // not recorded /// 0004477 // methenyltetrahydrofolate cyclohydrolase activity // not recorded /// 0004477 // methenyltetrahydrofolate cyclohydrolase activity // inferred from sequence or structural similarity /// 0004487 // methylenetetrahydrofolate dehydrogenase (NAD+) activity // inferred from direct assay /// 0004488 // methylenetetrahydrofolate dehydrogenase (NADP+) activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from direct assay </td> <td> -530.62 </td> <td> 562.61 </td> <td> -19.67 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201195_s_at </td> <td> 201195_s_at </td> <td> AB018009 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB018009.1 /DEF=Homo sapiens mRNA for L-type amino acid transporter 1, complete cds.  /FEA=mRNA /GEN=hLAT1 /PROD=L-type amino acid transporter 1 /DB_XREF=gi:5926731 /UG=Hs.184601 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 /FL=gb:AF077866.1 gb:AB018542.1 gb:AF104032.1 gb:NM_003486.1 gb:AB017908.1 gb:AB018009.1 </td> <td> AB018009 </td> <td> solute carrier family 7 (amino acid transporter light chain, L system), member 5 </td> <td> SLC7A5 </td> <td> 8140 </td> <td> NM_003486 /// XM_006721286 /// XM_006721287 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015804 // neutral amino acid transport // inferred from sequence or structural similarity /// 0015807 // L-amino acid transport // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 1902475 // L-alpha-amino acid transmembrane transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0015171 // amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0015175 // neutral amino acid transmembrane transporter activity // traceable author statement /// 0015179 // L-amino acid transmembrane transporter activity // inferred from electronic annotation /// 0042605 // peptide antigen binding // inferred from sequence or structural similarity </td> <td> -323.35 </td> <td> 317.75 </td> <td> -19.62 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 200799_at </td> <td> 200799_at </td> <td> NM_005345 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005345.3 /DEF=Homo sapiens heat shock 70kD protein 1A (HSPA1A), mRNA. /FEA=mRNA /GEN=HSPA1A /PROD=heat shock 70kD protein 1A /DB_XREF=gi:5579469 /UG=Hs.8997 heat shock 70kD protein 1A /FL=gb:BC002453.1 gb:NM_005345.3 </td> <td> NM_005345 </td> <td> heat shock 70kDa protein 1A /// heat shock 70kDa protein 1B </td> <td> HSPA1A /// HSPA1B </td> <td> 3303 /// 3304 </td> <td> NM_005345 /// NM_005346 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006402 // mRNA catabolic process // inferred from direct assay /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010941 // regulation of cell death // inferred from mutant phenotype /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0034605 // cellular response to heat // inferred from direct assay /// 0042026 // protein refolding // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0045648 // positive regulation of erythrocyte differentiation // inferred from mutant phenotype /// 0060548 // negative regulation of cell death // inferred from mutant phenotype /// 0070370 // cellular heat acclimation // inferred from mutant phenotype /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005814 // centriole // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008180 // COP9 signalosome // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001618 // virus receptor activity // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016887 // ATPase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042623 // ATPase activity, coupled // inferred from direct assay /// 0044183 // protein binding involved in protein folding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051082 // unfolded protein binding // traceable author statement </td> <td> 414.57 </td> <td> 321.54 </td> <td> 19.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 208687_x_at </td> <td> 208687_x_at </td> <td> AF352832 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF352832.1 /DEF=Homo sapiens constitutive heat shock protein 70 (HSC70) mRNA, complete cds.  /FEA=mRNA /GEN=HSC70 /PROD=constitutive heat shock protein 70 /DB_XREF=gi:13273303 /UG=Hs.180414 heat shock 70kD protein 8 /FL=gb:AF352832.1 gb:NM_006597.1 </td> <td> AF352832 </td> <td> heat shock 70kDa protein 8 /// small nucleolar RNA, C/D box 14C /// small nucleolar RNA, C/D box 14D </td> <td> HSPA8 /// SNORD14C /// SNORD14D </td> <td> 3312 /// 85389 /// 85390 </td> <td> NM_006597 /// NM_153201 /// NR_001453 /// NR_001454 /// XM_006718831 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006457 // protein folding // non-traceable author statement /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042026 // protein refolding // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 1902904 // negative regulation of fibril organization // inferred from direct assay </td> <td> 0000974 // Prp19 complex // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0061202 // clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016887 // ATPase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0023026 // MHC class II protein complex binding // inferred from direct assay /// 0031072 // heat shock protein binding // inferred from physical interaction /// 0042623 // ATPase activity, coupled // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from direct assay </td> <td> 1440.70 </td> <td> 1466.35 </td> <td> 19.06 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 203323_at </td> <td> 203323_at </td> <td> BF197655 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF197655 /FEA=EST /DB_XREF=gi:11086950 /DB_XREF=est:7m95b04.x1 /CLONE=IMAGE:3562710 /UG=Hs.139851 caveolin 2 /FL=gb:BC005256.1 gb:AF035752.1 gb:NM_001233.1 </td> <td> BF197655 </td> <td> caveolin 2 </td> <td> CAV2 </td> <td> 858 </td> <td> NM_001206747 /// NM_001206748 /// NM_001233 /// NM_198212 </td> <td> 0001937 // negative regulation of endothelial cell proliferation // inferred from sequence or structural similarity /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0006906 // vesicle fusion // inferred from direct assay /// 0007005 // mitochondrion organization // inferred from sequence or structural similarity /// 0007029 // endoplasmic reticulum organization // inferred from sequence or structural similarity /// 0007088 // regulation of mitosis // inferred from expression pattern /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016050 // vesicle organization // inferred from direct assay /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0048278 // vesicle docking // inferred from direct assay /// 0048741 // skeletal muscle fiber development // inferred from sequence or structural similarity /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0060161 // positive regulation of dopamine receptor signaling pathway // inferred from mutant phenotype /// 0070836 // caveola assembly // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0002080 // acrosomal membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005811 // lipid particle // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005901 // caveola // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030133 // transport vesicle // inferred from direct assay /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000149 // SNARE binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019905 // syntaxin binding // inferred from electronic annotation /// 0031748 // D1 dopamine receptor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0051219 // phosphoprotein binding // inferred from electronic annotation </td> <td> 306.00 </td> <td> 374.97 </td> <td> 18.63 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202014_at </td> <td> 202014_at </td> <td> NM_014330 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014330.2 /DEF=Homo sapiens growth arrest and DNA-damage-inducible 34 (GADD34), mRNA.  /FEA=mRNA /GEN=GADD34 /PROD=growth arrest and DNA-damage-inducible 34 /DB_XREF=gi:9790902 /UG=Hs.76556 growth arrest and DNA-damage-inducible 34 /FL=gb:BC003067.1 gb:U83981.1 gb:NM_014330.2 </td> <td> NM_014330 </td> <td> protein phosphatase 1, regulatory subunit 15A </td> <td> PPP1R15A </td> <td> 23645 </td> <td> NM_014330 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> -294.35 </td> <td> 269.12 </td> <td> -18.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 207528_s_at </td> <td> 207528_s_at </td> <td> NM_014331 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014331.1 /DEF=Homo sapiens solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 (SLC7A11), mRNA.  /FEA=mRNA /GEN=SLC7A11 /PROD=solute carrier family 7, (cationic amino acidtransporter, y+ system) member 11 /DB_XREF=gi:7657682 /UG=Hs.6682 solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 /FL=gb:AF200708.1 gb:AB026891.1 gb:NM_014331.1 </td> <td> NM_014331 </td> <td> solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 </td> <td> SLC7A11 </td> <td> 23657 </td> <td> NM_014331 /// XM_005262875 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009636 // response to toxic substance // inferred from direct assay /// 0015813 // L-glutamate transport // traceable author statement /// 0035094 // response to nicotine // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation /// 0070527 // platelet aggregation // inferred from electronic annotation </td> <td> 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015327 // cystine:glutamate antiporter activity // traceable author statement </td> <td> -685.12 </td> <td> 476.69 </td> <td> -18.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 207526_s_at </td> <td> 207526_s_at </td> <td> NM_003856 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003856.1 /DEF=Homo sapiens interleukin 1 receptor-like 1 (IL1RL1), mRNA. /FEA=mRNA /GEN=IL1RL1 /PROD=interleukin 1 receptor-like 1 /DB_XREF=gi:4507244 /UG=Hs.66 interleukin 1 receptor-like 1 /FL=gb:NM_003856.1 </td> <td> NM_003856 </td> <td> interleukin 1 receptor-like 1 </td> <td> IL1RL1 </td> <td> 9173 </td> <td> NM_001282408 /// NM_003856 /// NM_016232 /// NM_173459 /// NR_104167 /// XM_006712839 </td> <td> 0002826 // negative regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032689 // negative regulation of interferon-gamma production // inferred from electronic annotation /// 0032754 // positive regulation of interleukin-5 production // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement /// 0038172 // interleukin-33-mediated signaling pathway // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from electronic annotation /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0090197 // positive regulation of chemokine secretion // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0002113 // interleukin-33 binding // inferred from electronic annotation /// 0002114 // interleukin-33 receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // traceable author statement /// 0004908 // interleukin-1 receptor activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -783.77 </td> <td> 944.49 </td> <td> -18.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 206336_at </td> <td> 206336_at </td> <td> NM_002993 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002993.1 /DEF=Homo sapiens small inducible cytokine subfamily B (Cys-X-Cys), member 6 (granulocyte chemotactic protein 2) (SCYB6), mRNA.  /FEA=mRNA /GEN=SCYB6 /PROD=small inducible cytokine subfamily B(Cys-X-Cys), member 6 (granulocyte chemotactic protein 2) /DB_XREF=gi:4506850 /UG=Hs.164021 small inducible cytokine subfamily B (Cys-X-Cys), member 6 (granulocyte chemotactic protein 2) /FL=gb:U81234.1 gb:NM_002993.1 </td> <td> NM_002993 </td> <td> chemokine (C-X-C motif) ligand 6 </td> <td> CXCL6 </td> <td> 6372 </td> <td> NM_002993 </td> <td> 0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0060326 // cell chemotaxis // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation </td> <td> -531.40 </td> <td> 288.77 </td> <td> -18.17 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 210118_s_at </td> <td> 210118_s_at </td> <td> M15329 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M15329.1 /DEF=Human interleukin 1-alpha (IL1A) mRNA, complete cds. /FEA=mRNA /GEN=IL1A /PROD=interleukin 1-alpha /DB_XREF=gi:186277 /UG=Hs.1722 interleukin 1, alpha /FL=gb:M15329.1 </td> <td> M15329 </td> <td> interleukin 1, alpha </td> <td> IL1A </td> <td> 3552 </td> <td> NM_000575 </td> <td> 0001660 // fever generation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0019221 // cytokine-mediated signaling pathway // inferred from mutant phenotype /// 0034605 // cellular response to heat // inferred from direct assay /// 0035234 // ectopic germ cell programmed cell death // inferred from electronic annotation /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045840 // positive regulation of mitosis // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from direct assay /// 0050715 // positive regulation of cytokine secretion // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from mutant phenotype /// 0005829 // cytosol // inferred from direct assay </td> <td> 0005125 // cytokine activity // inferred from mutant phenotype /// 0005149 // interleukin-1 receptor binding // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> -279.80 </td> <td> 175.45 </td> <td> -18.13 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 212971_at </td> <td> 212971_at </td> <td> AI769685 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI769685 /FEA=EST /DB_XREF=gi:5236194 /DB_XREF=est:wj25f08.x1 /CLONE=IMAGE:2403879 /UG=Hs.159604 cysteinyl-tRNA synthetase </td> <td> AI769685 </td> <td> cysteinyl-tRNA synthetase </td> <td> CARS </td> <td> 833 </td> <td> NM_001014437 /// NM_001014438 /// NM_001194997 /// NM_001751 /// NM_139273 /// NR_036542 /// XM_006718340 /// XM_006718341 /// XM_006725129 /// XM_006725130 /// XR_428857 /// XR_430701 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006423 // cysteinyl-tRNA aminoacylation // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement </td> <td> 0000049 // tRNA binding // inferred from direct assay /// 0000049 // tRNA binding // inferred from mutant phenotype /// 0000049 // tRNA binding // non-traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004817 // cysteine-tRNA ligase activity // inferred from direct assay /// 0004817 // cysteine-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -911.60 </td> <td> 827.88 </td> <td> -18.05 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202081_at </td> <td> 202081_at </td> <td> NM_004907 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004907.1 /DEF=Homo sapiens immediate early protein (ETR101), mRNA. /FEA=mRNA /GEN=ETR101 /PROD=immediate early protein /DB_XREF=gi:4758313 /UG=Hs.737 immediate early protein /FL=gb:BC003625.1 gb:M62831.1 gb:NM_004907.1 </td> <td> NM_004907 </td> <td> immediate early response 2 </td> <td> IER2 </td> <td> 9592 </td> <td> NM_004907 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td>  </td> <td> 598.05 </td> <td> 854.18 </td> <td> 17.91 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 203574_at </td> <td> 203574_at </td> <td> NM_005384 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005384.1 /DEF=Homo sapiens nuclear factor, interleukin 3 regulated (NFIL3), mRNA. /FEA=mRNA /GEN=NFIL3 /PROD=nuclear factor, interleukin 3 regulated /DB_XREF=gi:4885516 /UG=Hs.79334 nuclear factor, interleukin 3 regulated /FL=gb:U26173.1 gb:NM_005384.1 </td> <td> NM_005384 </td> <td> nuclear factor, interleukin 3 regulated </td> <td> NFIL3 </td> <td> 4783 </td> <td> NM_001289999 /// NM_001290000 /// NM_005384 /// XM_005251999 /// XM_005252000 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -162.45 </td> <td> 131.60 </td> <td> -17.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 200020_at </td> <td> 200020_at </td> <td> NM_007375 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007375.1 /DEF=Homo sapiens TAR DNA binding protein (TARDBP), mRNA. /FEA=mRNA /GEN=TARDBP /PROD=TAR DNA binding protein /DB_XREF=gi:6678270 /UG=Hs.193989 TAR DNA binding protein /FL=gb:AL050265.1 gb:NM_007375.1 gb:U23731.1 </td> <td> NM_007375 </td> <td> TAR DNA binding protein </td> <td> TARDBP </td> <td> 23435 </td> <td> NM_007375 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0043922 // negative regulation by host of viral transcription // inferred from direct assay /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 446.05 </td> <td> 350.10 </td> <td> 17.63 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 215485_s_at </td> <td> 215485_s_at </td> <td> AA284705 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA284705 /FEA=EST /DB_XREF=gi:1927264 /DB_XREF=est:zt20g08.r1 /CLONE=IMAGE:713726 /UG=Hs.168383 intercellular adhesion molecule 1 (CD54), human rhinovirus receptor </td> <td> AA284705 </td> <td> intercellular adhesion molecule 1 </td> <td> ICAM1 </td> <td> 3383 </td> <td> NM_000201 </td> <td> 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001910 // regulation of leukocyte mediated cytotoxicity // traceable author statement /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0002291 // T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell // inferred from mutant phenotype /// 0002457 // T cell antigen processing and presentation // inferred from electronic annotation /// 0002693 // positive regulation of cellular extravasation // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from direct assay /// 0007157 // heterophilic cell-cell adhesion // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from mutant phenotype /// 0007569 // cell aging // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0010477 // response to sulfur dioxide // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0022614 // membrane to membrane docking // inferred from expression pattern /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0031669 // cellular response to nutrient levels // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033627 // cell adhesion mediated by integrin // inferred from electronic annotation /// 0034698 // response to gonadotropin // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043200 // response to amino acid // inferred from electronic annotation /// 0044406 // adhesion of symbiont to host // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0046813 // receptor-mediated virion attachment to host cell // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // inferred from expression pattern /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0061028 // establishment of endothelial barrier // inferred from genetic interaction /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071312 // cellular response to alkaloid // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071347 // cellular response to interleukin-1 // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from direct assay </td> <td> 0001772 // immunological synapse // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005178 // integrin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> -405.10 </td> <td> 240.93 </td> <td> -17.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 221497_x_at </td> <td> 221497_x_at </td> <td> BC005369 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005369.1 /DEF=Homo sapiens, chromosome 1 open reading frame 12, clone MGC:12484, mRNA, complete cds.  /FEA=mRNA /PROD=chromosome 1 open reading frame 12 /DB_XREF=gi:13529208 /UG=Hs.6523 chromosome 1 open reading frame 12 /FL=gb:AF229245.1 gb:AF277176.1 gb:NM_022051.1 gb:BC005369.1 </td> <td> BC005369 </td> <td> egl-9 family hypoxia-inducible factor 1 </td> <td> EGLN1 </td> <td> 54583 </td> <td> NM_022051 /// XM_005273166 /// XM_005273167 /// XM_006711782 </td> <td> 0001666 // response to hypoxia // inferred from direct assay /// 0018401 // peptidyl-proline hydroxylation to 4-hydroxy-L-proline // inferred from direct assay /// 0019511 // peptidyl-proline hydroxylation // inferred from electronic annotation /// 0030821 // negative regulation of cAMP catabolic process // inferred from sequence or structural similarity /// 0032364 // oxygen homeostasis // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045765 // regulation of angiogenesis // inferred from sequence or structural similarity /// 0051344 // negative regulation of cyclic-nucleotide phosphodiesterase activity // inferred from sequence or structural similarity /// 0055008 // cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060347 // heart trabecula formation // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060711 // labyrinthine layer development // inferred from electronic annotation /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0071456 // cellular response to hypoxia // traceable author statement /// 0071731 // response to nitric oxide // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0031543 // peptidyl-proline dioxygenase activity // traceable author statement /// 0031545 // peptidyl-proline 4-dioxygenase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -288.80 </td> <td> 242.57 </td> <td> -17.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 211671_s_at </td> <td> 211671_s_at </td> <td> U01351 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U01351.1 /DEF=Human glucocorticoid receptor alpha-2 mRNA, complete cds. /FEA=mRNA /PROD=glucocorticoid receptor alpha-2 /DB_XREF=gi:458656 /FL=gb:U01351.1 </td> <td> U01351 </td> <td> nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) </td> <td> NR3C1 </td> <td> 2908 </td> <td> NM_000176 /// NM_001018074 /// NM_001018075 /// NM_001018076 /// NM_001018077 /// NM_001020825 /// NM_001024094 /// NM_001204258 /// NM_001204259 /// NM_001204260 /// NM_001204261 /// NM_001204262 /// NM_001204263 /// NM_001204264 /// NM_001204265 /// XM_005268419 /// XM_005268420 /// XM_005268421 /// XM_005268422 /// XM_005268423 </td> <td> 0006111 // regulation of gluconeogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008211 // glucocorticoid metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0031946 // regulation of glucocorticoid biosynthetic process // inferred from electronic annotation /// 0042921 // glucocorticoid receptor signaling pathway // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043402 // glucocorticoid mediated signaling pathway // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004883 // glucocorticoid receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -187.20 </td> <td> 151.00 </td> <td> -17.14 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 217927_at </td> <td> 217927_at </td> <td> NM_014041 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014041.1 /DEF=Homo sapiens HSPC033 protein (HSPC033), mRNA. /FEA=mRNA /GEN=HSPC033 /PROD=HSPC033 protein /DB_XREF=gi:7661745 /UG=Hs.11125 HSPC033 protein /FL=gb:BC000884.1 gb:AF092138.1 gb:NM_014041.1 </td> <td> NM_014041 </td> <td> signal peptidase complex subunit 1 homolog (S. cerevisiae) </td> <td> SPCS1 </td> <td> 28972 </td> <td> NM_014041 </td> <td> 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005787 // signal peptidase complex // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from electronic annotation </td> <td> 324.98 </td> <td> 582.64 </td> <td> 17.13 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 221985_at </td> <td> 221985_at </td> <td> AW006750 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW006750 /FEA=EST /DB_XREF=gi:5855528 /DB_XREF=est:wr28h09.x1 /CLONE=IMAGE:2489057 /UG=Hs.246875 hypothetical protein FLJ20059 </td> <td> AW006750 </td> <td> kelch-like family member 24 </td> <td> KLHL24 </td> <td> 54800 </td> <td> NM_017644 /// XM_005247552 /// XM_005247553 /// XM_005247554 /// XM_005247555 /// XM_005247556 /// XM_006713674 /// XR_241499 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -173.48 </td> <td> 130.76 </td> <td> -17.12 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 219492_at </td> <td> 219492_at </td> <td> NM_012110 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012110.1 /DEF=Homo sapiens cystein-rich hydrophobic domain 2 (CHIC2), mRNA. /FEA=mRNA /GEN=CHIC2 /PROD=cystein-rich hydrophobic domain 2 /DB_XREF=gi:6912275 /UG=Hs.119488 cystein-rich hydrophobic domain 2 /FL=gb:AF159423.1 gb:NM_012110.1 </td> <td> NM_012110 </td> <td> cysteine-rich hydrophobic domain 2 </td> <td> CHIC2 </td> <td> 26511 </td> <td> NM_012110 /// XM_005265738 /// XM_006714037 </td> <td>  </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005798 // Golgi-associated vesicle // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -335.13 </td> <td> 459.89 </td> <td> -17.06 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 200920_s_at </td> <td> 200920_s_at </td> <td> AL535380 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL535380 /FEA=EST /DB_XREF=gi:12798873 /DB_XREF=est:AL535380 /CLONE=CS0DF009YN13 (5 prime) /UG=Hs.77054 B-cell translocation gene 1, anti-proliferative /FL=gb:NM_001731.1 </td> <td> AL535380 </td> <td> B-cell translocation gene 1, anti-proliferative </td> <td> BTG1 </td> <td> 694 </td> <td> NM_001731 </td> <td> 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016477 // cell migration // non-traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0045603 // positive regulation of endothelial cell differentiation // inferred from mutant phenotype /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0045663 // positive regulation of myoblast differentiation // non-traceable author statement /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 2000271 // positive regulation of fibroblast apoptotic process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from mutant phenotype </td> <td> 0003712 // transcription cofactor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019900 // kinase binding // non-traceable author statement </td> <td> -346.05 </td> <td> 333.65 </td> <td> -17.06 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202672_s_at </td> <td> 202672_s_at </td> <td> NM_001674 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001674.1 /DEF=Homo sapiens activating transcription factor 3 (ATF3), mRNA. /FEA=mRNA /GEN=ATF3 /PROD=activating transcription factor 3 long isoform /DB_XREF=gi:4502262 /UG=Hs.460 activating transcription factor 3 /FL=gb:L19871.1 gb:NM_001674.1 </td> <td> NM_001674 </td> <td> activating transcription factor 3 </td> <td> ATF3 </td> <td> 467 </td> <td> NM_001030287 /// NM_001040619 /// NM_001206484 /// NM_001206485 /// NM_001206486 /// NM_001206488 /// NM_001674 /// NM_004024 /// XM_005273146 </td> <td> 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0001228 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred by curator /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -424.30 </td> <td> 274.43 </td> <td> -16.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 204470_at </td> <td> 204470_at </td> <td> NM_001511 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001511.1 /DEF=Homo sapiens GRO1 oncogene (melanoma growth stimulating activity, alpha) (GRO1), mRNA.  /FEA=mRNA /GEN=GRO1 /PROD=GRO1 oncogene (melanoma growth stimulatingactivity, alpha) /DB_XREF=gi:4504152 /UG=Hs.789 GRO1 oncogene (melanoma growth stimulating activity, alpha) /FL=gb:NM_001511.1 </td> <td> NM_001511 </td> <td> chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) </td> <td> CXCL1 </td> <td> 2919 </td> <td> NM_001511 /// NR_046035 </td> <td> 0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0060326 // cell chemotaxis // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation </td> <td> -2968.80 </td> <td> 1606.85 </td> <td> -16.79 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201278_at </td> <td> 201278_at </td> <td> N21202 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N21202 /FEA=EST /DB_XREF=gi:1126372 /DB_XREF=est:yx41e12.s1 /CLONE=IMAGE:264334 /UG=Hs.81988 disabled (Drosophila) homolog 2 (mitogen-responsive phosphoprotein) /FL=gb:U39050.1 gb:U53446.1 gb:BC003064.1 gb:NM_001343.1 </td> <td> N21202 </td> <td> Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) /// uncharacterized LOC101926921 </td> <td> DAB2 /// LOC101926921 </td> <td> 1601 /// 101926921 </td> <td> NM_001244871 /// NM_001343 /// XR_241759 /// XR_249766 /// XR_251775 </td> <td> 0000904 // cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001921 // positive regulation of receptor recycling // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0006907 // pinocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007588 // excretion // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030099 // myeloid cell differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0032091 // negative regulation of protein binding // inferred from mutant phenotype /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0032968 // positive regulation of transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from direct assay /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 0061024 // membrane organization // traceable author statement /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from electronic annotation /// 2000096 // positive regulation of Wnt signaling pathway, planar cell polarity pathway // inferred from mutant phenotype /// 2000370 // positive regulation of clathrin-mediated endocytosis // inferred from mutant phenotype /// 2000643 // positive regulation of early endosome to late endosome transport // inferred from mutant phenotype /// 2001046 // positive regulation of integrin-mediated signaling pathway // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030132 // clathrin coat of coated pit // inferred from electronic annotation /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070022 // transforming growth factor beta receptor homodimeric complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0030276 // clathrin binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0035612 // AP-2 adaptor complex binding // inferred from electronic annotation /// 0035615 // clathrin adaptor activity // inferred from mutant phenotype /// 0038024 // cargo receptor activity // inferred from mutant phenotype /// 0046332 // SMAD binding // inferred from direct assay </td> <td> 323.55 </td> <td> 382.57 </td> <td> 16.77 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 212501_at </td> <td> 212501_at </td> <td> AL564683 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL564683 /FEA=EST /DB_XREF=gi:12915335 /DB_XREF=est:AL564683 /CLONE=CS0DM007YK12 (3 prime) /UG=Hs.99029 CCAATenhancer binding protein (CEBP), beta /FL=gb:NM_005194.1 </td> <td> AL564683 </td> <td> CCAAT/enhancer binding protein (C/EBP), beta </td> <td> CEBPB </td> <td> 1051 </td> <td> NM_001285878 /// NM_001285879 /// NM_005194 </td> <td> 0001892 // embryonic placenta development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006953 // acute-phase response // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045408 // regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0060644 // mammary gland epithelial cell differentiation // inferred from electronic annotation /// 0060850 // regulation of transcription involved in cell fate commitment // inferred from sequence or structural similarity /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation </td> <td> 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0035259 // glucocorticoid receptor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -339.03 </td> <td> 264.59 </td> <td> -16.27 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202023_at </td> <td> 202023_at </td> <td> NM_004428 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004428.1 /DEF=Homo sapiens ephrin-A1 (EFNA1), mRNA. /FEA=mRNA /GEN=EFNA1 /PROD=ephrin A1 precursor /DB_XREF=gi:4758245 /UG=Hs.1624 ephrin-A1 /FL=gb:M57730.1 gb:NM_004428.1 </td> <td> NM_004428 </td> <td> ephrin-A1 </td> <td> EFNA1 </td> <td> 1942 </td> <td> NM_004428 /// NM_182685 /// XM_005244940 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001525 // angiogenesis // not recorded /// 0003180 // aortic valve morphogenesis // inferred from sequence or structural similarity /// 0003183 // mitral valve morphogenesis // inferred from sequence or structural similarity /// 0003199 // endocardial cushion to mesenchymal transition involved in heart valve formation // inferred from sequence or structural similarity /// 0007267 // cell-cell signaling // traceable author statement /// 0007411 // axon guidance // not recorded /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0014028 // notochord formation // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0061002 // negative regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0046658 // anchored component of plasma membrane // not recorded /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from physical interaction </td> <td> -318.00 </td> <td> 258.32 </td> <td> -16.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 209098_s_at </td> <td> 209098_s_at </td> <td> U61276 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U61276.1 /DEF=Human transmembrane protein Jagged 1 (HJ1) mRNA, complete cds. /FEA=mRNA /GEN=HJ1 /PROD=transmembrane protein Jagged 1 /DB_XREF=gi:1438936 /UG=Hs.91143 jagged 1 (Alagille syndrome) /FL=gb:U61276.1 gb:U73936.1 gb:AF003837.1 gb:AF028593.1 gb:NM_000214.1 </td> <td> U61276 </td> <td> jagged 1 </td> <td> JAG1 </td> <td> 182 </td> <td> NM_000214 </td> <td> 0001525 // angiogenesis // non-traceable author statement /// 0001709 // cell fate determination // non-traceable author statement /// 0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0002456 // T cell mediated immunity // inferred from mutant phenotype /// 0003184 // pulmonary valve morphogenesis // inferred from mutant phenotype /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0007154 // cell communication // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0030097 // hemopoiesis // non-traceable author statement /// 0030216 // keratinocyte differentiation // non-traceable author statement /// 0030334 // regulation of cell migration // non-traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0035909 // aorta morphogenesis // inferred from sequence or structural similarity /// 0042127 // regulation of cell proliferation // non-traceable author statement /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0045445 // myoblast differentiation // non-traceable author statement /// 0045446 // endothelial cell differentiation // non-traceable author statement /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045639 // positive regulation of myeloid cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048839 // inner ear development // inferred from electronic annotation /// 0060411 // cardiac septum morphogenesis // inferred from sequence or structural similarity /// 0061156 // pulmonary artery morphogenesis // inferred from mutant phenotype /// 0061309 // cardiac neural crest cell development involved in outflow tract morphogenesis // inferred from sequence or structural similarity /// 0061314 // Notch signaling involved in heart development // inferred by curator /// 0061314 // Notch signaling involved in heart development // inferred from mutant phenotype /// 0061444 // endocardial cushion cell development // inferred from sequence or structural similarity /// 0072017 // distal tubule development // inferred from electronic annotation /// 0072070 // loop of Henle development // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation </td> <td> 0005112 // Notch binding // non-traceable author statement /// 0005198 // structural molecule activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // non-traceable author statement </td> <td> -270.92 </td> <td> 201.56 </td> <td> -15.88 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201502_s_at </td> <td> 201502_s_at </td> <td> AI078167 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI078167 /FEA=EST /DB_XREF=gi:3412575 /DB_XREF=est:oz30d08.x1 /CLONE=IMAGE:1676847 /UG=Hs.81328 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha /FL=gb:NM_020529.1 gb:BC002601.1 gb:BC004983.1 gb:M69043.1 </td> <td> AI078167 </td> <td> nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha </td> <td> NFKBIA </td> <td> 4792 </td> <td> NM_020529 </td> <td> 0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0007253 // cytoplasmic sequestering of NF-kappaB // inferred from mutant phenotype /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from mutant phenotype /// 0010875 // positive regulation of cholesterol efflux // inferred from mutant phenotype /// 0010888 // negative regulation of lipid storage // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032270 // positive regulation of cellular protein metabolic process // inferred from mutant phenotype /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042345 // regulation of NF-kappaB import into nucleus // non-traceable author statement /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // non-traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045638 // negative regulation of myeloid cell differentiation // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0070417 // cellular response to cold // non-traceable author statement /// 0070427 // nucleotide-binding oligomerization domain containing 1 signaling pathway // inferred from electronic annotation /// 0070431 // nucleotide-binding oligomerization domain containing 2 signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0033256 // I-kappaB/NF-kappaB complex // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0008139 // nuclear localization sequence binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from direct assay /// 0051059 // NF-kappaB binding // inferred from physical interaction </td> <td> -1216.00 </td> <td> 790.77 </td> <td> -15.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 208835_s_at </td> <td> 208835_s_at </td> <td> AW089673 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW089673 /FEA=EST /DB_XREF=gi:6047017 /DB_XREF=est:xd21h11.x1 /CLONE=IMAGE:2594469 /UG=Hs.3688 cisplatin resistance-associated overexpressed protein /FL=gb:AB034205.1 </td> <td> AW089673 </td> <td> LUC7-like 3 (S. cerevisiae) </td> <td> LUC7L3 </td> <td> 51747 </td> <td> NM_006107 /// NM_016424 /// XM_005257448 /// XM_005257449 /// XM_005257450 /// XM_005257451 /// XM_005257452 /// XM_005257454 /// XM_005257455 /// XM_006721943 /// XR_243663 </td> <td> 0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005685 // U1 snRNP // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 140.45 </td> <td> 137.43 </td> <td> 15.79 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201280_s_at </td> <td> 201280_s_at </td> <td> NM_001343 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001343.1 /DEF=Homo sapiens disabled (Drosophila) homolog 2 (mitogen-responsive phosphoprotein) (DAB2), mRNA.  /FEA=mRNA /GEN=DAB2 /PROD=disabled (Drosophila) homolog 2 /DB_XREF=gi:4503250 /UG=Hs.81988 disabled (Drosophila) homolog 2 (mitogen-responsive phosphoprotein) /FL=gb:U39050.1 gb:U53446.1 gb:BC003064.1 gb:NM_001343.1 </td> <td> NM_001343 </td> <td> Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) /// uncharacterized LOC101926921 </td> <td> DAB2 /// LOC101926921 </td> <td> 1601 /// 101926921 </td> <td> NM_001244871 /// NM_001343 /// XR_241759 /// XR_249766 /// XR_251775 </td> <td> 0000904 // cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001921 // positive regulation of receptor recycling // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0006907 // pinocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007588 // excretion // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030099 // myeloid cell differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0032091 // negative regulation of protein binding // inferred from mutant phenotype /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0032968 // positive regulation of transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from direct assay /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 0061024 // membrane organization // traceable author statement /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from electronic annotation /// 2000096 // positive regulation of Wnt signaling pathway, planar cell polarity pathway // inferred from mutant phenotype /// 2000370 // positive regulation of clathrin-mediated endocytosis // inferred from mutant phenotype /// 2000643 // positive regulation of early endosome to late endosome transport // inferred from mutant phenotype /// 2001046 // positive regulation of integrin-mediated signaling pathway // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030132 // clathrin coat of coated pit // inferred from electronic annotation /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070022 // transforming growth factor beta receptor homodimeric complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0030276 // clathrin binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0035612 // AP-2 adaptor complex binding // inferred from electronic annotation /// 0035615 // clathrin adaptor activity // inferred from mutant phenotype /// 0038024 // cargo receptor activity // inferred from mutant phenotype /// 0046332 // SMAD binding // inferred from direct assay </td> <td> 399.48 </td> <td> 431.16 </td> <td> 15.74 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 212361_s_at </td> <td> 212361_s_at </td> <td> AW190070 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW190070 /FEA=EST /DB_XREF=gi:6464550 /DB_XREF=est:xl11f11.x1 /CLONE=IMAGE:2675949 /UG=Hs.1526 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 </td> <td> AW190070 </td> <td> ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 </td> <td> ATP2A2 </td> <td> 488 </td> <td> NM_001135765 /// NM_001681 /// NM_170665 /// XM_005253888 /// XR_243009 </td> <td> 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // traceable author statement /// 0006984 // ER-nucleus signaling pathway // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0010460 // positive regulation of heart rate // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0045822 // negative regulation of heart contraction // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055119 // relaxation of cardiac muscle // traceable author statement /// 0070296 // sarcoplasmic reticulum calcium ion transport // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement /// 0086036 // regulation of cardiac muscle cell membrane potential // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0031095 // platelet dense tubular network membrane // traceable author statement /// 0033017 // sarcoplasmic reticulum membrane // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019829 // cation-transporting ATPase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0086039 // calcium-transporting ATPase activity involved in regulation of cardiac muscle cell membrane potential // traceable author statement </td> <td> 237.93 </td> <td> 240.94 </td> <td> 15.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201783_s_at </td> <td> 201783_s_at </td> <td> NM_021975 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021975.1 /DEF=Homo sapiens v-rel avian reticuloendotheliosis viral oncogene homolog A (nuclear factor of kappa light polypeptide gene enhancer in B-cells 3 (p65)) (RELA), mRNA.  /FEA=mRNA /GEN=RELA /PROD=v-rel avian reticuloendotheliosis viral oncogenehomolog A (nuclear factor of kappa light polypeptide geneenhancer in B-cells 3 (p65)) /DB_XREF=gi:11496238 /UG=Hs.75569 v-rel avian reticuloendotheliosis viral oncogene homolog A (nuclear factor of kappa light polypeptide gene enhancer in B-cells 3 (p65)) /FL=gb:NM_021975.1 gb:L19067.1 </td> <td> NM_021975 </td> <td> v-rel avian reticuloendotheliosis viral oncogene homolog A </td> <td> RELA </td> <td> 5970 </td> <td> NM_001145138 /// NM_001243984 /// NM_001243985 /// NM_021975 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001889 // liver development // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006117 // acetaldehyde metabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006952 // defense response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from direct assay /// 0006968 // cellular defense response // non-traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from direct assay /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010224 // response to UV-B // inferred from direct assay /// 0014040 // positive regulation of Schwann cell differentiation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0033590 // response to cobalamin // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043200 // response to amino acid // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0045084 // positive regulation of interleukin-12 biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050727 // regulation of inflammatory response // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051607 // defense response to virus // non-traceable author statement /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0070431 // nucleotide-binding oligomerization domain containing 2 signaling pathway // inferred from direct assay /// 0070555 // response to interleukin-1 // inferred from genetic interaction /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071316 // cellular response to nicotine // inferred from mutant phenotype /// 0071347 // cellular response to interleukin-1 // inferred from direct assay /// 0071354 // cellular response to interleukin-6 // inferred from mutant phenotype /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071375 // cellular response to peptide hormone stimulus // inferred from mutant phenotype /// 2000630 // positive regulation of miRNA metabolic process // inferred from mutant phenotype /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001205 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0042301 // phosphate ion binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from physical interaction /// 0070491 // repressing transcription factor binding // inferred from physical interaction /// 0071532 // ankyrin repeat binding // inferred from electronic annotation </td> <td> -235.30 </td> <td> 468.60 </td> <td> -15.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 213194_at </td> <td> 213194_at </td> <td> BF059159 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF059159 /FEA=EST /DB_XREF=gi:10813055 /DB_XREF=est:7k66g04.x1 /CLONE=IMAGE:3480391 /UG=Hs.301198 roundabout (axon guidance receptor, Drosophila) homolog 1 /FL=gb:AF040990.1 gb:NM_002941.1 </td> <td> BF059159 </td> <td> roundabout, axon guidance receptor, homolog 1 (Drosophila) </td> <td> ROBO1 </td> <td> 6091 </td> <td> NM_001145845 /// NM_002941 /// NM_133631 /// XM_006713276 /// XM_006713277 /// XM_006713278 </td> <td> 0002042 // cell migration involved in sprouting angiogenesis // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007156 // homophilic cell adhesion // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016199 // axon midline choice point recognition // inferred from sequence or structural similarity /// 0021836 // chemorepulsion involved in postnatal olfactory bulb interneuron migration // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033600 // negative regulation of mammary gland epithelial cell proliferation // inferred from mutant phenotype /// 0035385 // Roundabout signaling pathway // inferred from mutant phenotype /// 0050772 // positive regulation of axonogenesis // inferred from direct assay /// 0050925 // negative regulation of negative chemotaxis // inferred from direct assay /// 0060763 // mammary duct terminal end bud growth // inferred from electronic annotation /// 0070100 // negative regulation of chemokine-mediated signaling pathway // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030673 // axolemma // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008046 // axon guidance receptor activity // traceable author statement /// 0030275 // LRR domain binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -227.40 </td> <td> 231.15 </td> <td> -15.40 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201084_s_at </td> <td> 201084_s_at </td> <td> NM_014739 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014739.1 /DEF=Homo sapiens KIAA0164 gene product (KIAA0164), mRNA. /FEA=mRNA /GEN=KIAA0164 /PROD=KIAA0164 gene product /DB_XREF=gi:7661957 /UG=Hs.80338 KIAA0164 gene product /FL=gb:D79986.1 gb:NM_014739.1 </td> <td> NM_014739 </td> <td> BCL2-associated transcription factor 1 </td> <td> BCLAF1 </td> <td> 9774 </td> <td> NM_001077440 /// NM_001077441 /// NM_014739 /// XM_005267236 /// XM_005267237 /// XM_005267238 /// XM_005267239 /// XR_245558 /// XR_245559 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043620 // regulation of DNA-templated transcription in response to stress // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // traceable author statement /// 2000144 // positive regulation of DNA-templated transcription, initiation // inferred from mutant phenotype /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 335.30 </td> <td> 497.77 </td> <td> 15.30 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 204053_x_at </td> <td> 204053_x_at </td> <td> U96180 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U96180.1 /DEF=Human protein tyrosine phosphatase (TEP1) mRNA, complete cds. /FEA=mRNA /GEN=TEP1 /PROD=protein tyrosine phosphatase /DB_XREF=gi:2039369 /UG=Hs.10712 phosphatase and tensin homolog (mutated in multiple advanced cancers 1) /FL=gb:U92436.1 gb:U93051.1 gb:U96180.1 gb:NM_000314.1 </td> <td> U96180 </td> <td> phosphatase and tensin homolog </td> <td> PTEN </td> <td> 5728 </td> <td> NM_000314 /// XM_006717926 /// XM_006717927 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0002902 // regulation of B cell apoptotic process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006915 // apoptotic process // inferred from sequence or structural similarity /// 0007092 // activation of mitotic anaphase-promoting complex activity // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007270 // neuron-neuron synaptic transmission // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0007613 // memory // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009749 // response to glucose // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0014067 // negative regulation of phosphatidylinositol 3-kinase signaling // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from sequence or structural similarity /// 0021542 // dentate gyrus development // inferred from sequence or structural similarity /// 0021955 // central nervous system neuron axonogenesis // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031642 // negative regulation of myelination // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0031658 // negative regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle // inferred from direct assay /// 0032286 // central nervous system myelin maintenance // inferred from sequence or structural similarity /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032535 // regulation of cellular component size // inferred from sequence or structural similarity /// 0033032 // regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033198 // response to ATP // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from sequence or structural similarity /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042711 // maternal behavior // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043491 // protein kinase B signaling // inferred from sequence or structural similarity /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045475 // locomotor rhythm // inferred from sequence or structural similarity /// 0045792 // negative regulation of cell size // inferred from sequence or structural similarity /// 0046621 // negative regulation of organ growth // inferred from sequence or structural similarity /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from direct assay /// 0046856 // phosphatidylinositol dephosphorylation // inferred from direct assay /// 0046856 // phosphatidylinositol dephosphorylation // inferred from mutant phenotype /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048738 // cardiac muscle tissue development // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0048854 // brain morphogenesis // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050765 // negative regulation of phagocytosis // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051895 // negative regulation of focal adhesion assembly // inferred from mutant phenotype /// 0051898 // negative regulation of protein kinase B signaling // inferred from mutant phenotype /// 0060024 // rhythmic synaptic transmission // inferred from sequence or structural similarity /// 0060070 // canonical Wnt signaling pathway // inferred from direct assay /// 0060074 // synapse maturation // inferred from sequence or structural similarity /// 0060134 // prepulse inhibition // inferred from sequence or structural similarity /// 0060179 // male mating behavior // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0060292 // long term synaptic depression // inferred from electronic annotation /// 0060736 // prostate gland growth // inferred from electronic annotation /// 0060997 // dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061002 // negative regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0090071 // negative regulation of ribosome biogenesis // inferred from electronic annotation /// 0090344 // negative regulation of cell aging // inferred from electronic annotation /// 0090394 // negative regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 0097105 // presynaptic membrane assembly // inferred from sequence or structural similarity /// 0097107 // postsynaptic density assembly // inferred from sequence or structural similarity /// 2000060 // positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 2000808 // negative regulation of synaptic vesicle clustering // inferred from sequence or structural similarity /// 2001235 // positive regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0009898 // cytoplasmic side of plasma membrane // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0035749 // myelin sheath adaxonal region // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from direct assay /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from sequence or structural similarity /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004438 // phosphatidylinositol-3-phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0005161 // platelet-derived growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0010997 // anaphase-promoting complex binding // inferred from physical interaction /// 0016314 // phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity // inferred from direct assay /// 0016314 // phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0051717 // inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity // inferred from direct assay /// 0051717 // inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity // traceable author statement /// 0051800 // phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity // inferred from direct assay /// 0051800 // phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity // traceable author statement </td> <td> -146.88 </td> <td> 185.06 </td> <td> -15.21 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 213233_s_at </td> <td> 213233_s_at </td> <td> AA460694 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA460694 /FEA=EST /DB_XREF=gi:2185814 /DB_XREF=est:zx69c04.s1 /CLONE=IMAGE:796710 /UG=Hs.106283 hypothetical protein FLJ10262 </td> <td> AA460694 </td> <td> kelch-like family member 9 </td> <td> KLHL9 </td> <td> 55958 </td> <td> NM_001040713 /// NM_018847 </td> <td> 0000910 // cytokinesis // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0030496 // midbody // inferred from direct assay /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 138.82 </td> <td> 197.51 </td> <td> 15.08 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 204203_at </td> <td> 204203_at </td> <td> NM_001806 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001806.1 /DEF=Homo sapiens CCAATenhancer binding protein (CEBP), gamma (CEBPG), mRNA.  /FEA=mRNA /GEN=CEBPG /PROD=CCAATenhancer binding protein gamma /DB_XREF=gi:4502768 /UG=Hs.2227 CCAATenhancer binding protein (CEBP), gamma /FL=gb:NM_001806.1 gb:U20240.1 </td> <td> NM_001806 </td> <td> CCAAT/enhancer binding protein (C/EBP), gamma </td> <td> CEBPG </td> <td> 1054 </td> <td> NM_001252296 /// NM_001806 </td> <td> 0001889 // liver development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006955 // immune response // inferred from sequence or structural similarity /// 0016071 // mRNA metabolic process // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from sequence or structural similarity /// 0042267 // natural killer cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0043353 // enucleate erythrocyte differentiation // inferred from sequence or structural similarity /// 0043388 // positive regulation of DNA binding // traceable author statement /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0045078 // positive regulation of interferon-gamma biosynthetic process // inferred from sequence or structural similarity /// 0045739 // positive regulation of DNA repair // inferred from expression pattern /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay </td> <td> -133.80 </td> <td> 127.83 </td> <td> -15.06 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202644_s_at </td> <td> 202644_s_at </td> <td> NM_006290 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006290.1 /DEF=Homo sapiens tumor necrosis factor, alpha-induced protein 3 (TNFAIP3), mRNA.  /FEA=mRNA /GEN=TNFAIP3 /PROD=tumor necrosis factor, alpha-induced protein 3 /DB_XREF=gi:5454131 /UG=Hs.211600 tumor necrosis factor, alpha-induced protein 3 /FL=gb:M59465.1 gb:NM_006290.1 </td> <td> NM_006290 </td> <td> tumor necrosis factor, alpha-induced protein 3 </td> <td> TNFAIP3 </td> <td> 7128 </td> <td> NM_001270507 /// NM_001270508 /// NM_006290 /// XM_005267119 /// XM_006715555 </td> <td> 0001922 // B-1 B cell homeostasis // inferred from sequence or structural similarity /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0002634 // regulation of germinal center formation // inferred from sequence or structural similarity /// 0002677 // negative regulation of chronic inflammatory response // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0032691 // negative regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032720 // negative regulation of tumor necrosis factor production // inferred from sequence or structural similarity /// 0034136 // negative regulation of toll-like receptor 2 signaling pathway // non-traceable author statement /// 0034140 // negative regulation of toll-like receptor 3 signaling pathway // inferred from direct assay /// 0034144 // negative regulation of toll-like receptor 4 signaling pathway // non-traceable author statement /// 0034148 // negative regulation of toll-like receptor 5 signaling pathway // inferred from electronic annotation /// 0035871 // protein K11-linked deubiquitination // inferred from direct assay /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0045736 // negative regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0045779 // negative regulation of bone resorption // non-traceable author statement /// 0045824 // negative regulation of innate immune response // inferred from sequence or structural similarity /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050691 // regulation of defense response to virus by host // non-traceable author statement /// 0050728 // negative regulation of inflammatory response // inferred from sequence or structural similarity /// 0050869 // negative regulation of B cell activation // inferred from sequence or structural similarity /// 0051259 // protein oligomerization // non-traceable author statement /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0061043 // regulation of vascular wound healing // non-traceable author statement /// 0070301 // cellular response to hydrogen peroxide // inferred from sequence or structural similarity /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070429 // negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway // inferred from electronic annotation /// 0070433 // negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway // inferred from electronic annotation /// 0070536 // protein K63-linked deubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0072573 // tolerance induction to lipopolysaccharide // inferred from mutant phenotype /// 0090291 // negative regulation of osteoclast proliferation // non-traceable author statement /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 2000347 // positive regulation of hepatocyte proliferation // inferred from electronic annotation /// 2000349 // negative regulation of CD40 signaling pathway // inferred from mutant phenotype /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0043130 // ubiquitin binding // inferred from physical interaction /// 0043621 // protein self-association // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -575.07 </td> <td> 338.96 </td> <td> -15.05 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 203910_at </td> <td> 203910_at </td> <td> NM_004815 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004815.1 /DEF=Homo sapiens PTPL1-associated RhoGAP 1 (PARG1), mRNA. /FEA=mRNA /GEN=PARG1 /PROD=PTPL1-associated RhoGAP 1 /DB_XREF=gi:4758881 /UG=Hs.70983 PTPL1-associated RhoGAP 1 /FL=gb:U90920.1 gb:NM_004815.1 </td> <td> NM_004815 </td> <td> Rho GTPase activating protein 29 </td> <td> ARHGAP29 </td> <td> 9411 </td> <td> NM_004815 /// XM_006711048 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 305.78 </td> <td> 989.66 </td> <td> 15.00 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 212295_s_at </td> <td> 212295_s_at </td> <td> AA148507 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA148507 /FEA=EST /DB_XREF=gi:1721551 /DB_XREF=est:zl06c05.s1 /CLONE=IMAGE:491528 /UG=Hs.14846 Homo sapiens mRNA; cDNA DKFZp564D016 (from clone DKFZp564D016) </td> <td> AA148507 </td> <td> solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 </td> <td> SLC7A1 </td> <td> 6541 </td> <td> NM_003045 /// XM_005266507 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0015809 // arginine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015181 // arginine transmembrane transporter activity // inferred from electronic annotation </td> <td> -593.13 </td> <td> 886.34 </td> <td> -14.75 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 212912_at </td> <td> 212912_at </td> <td> AI992251 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI992251 /FEA=EST /DB_XREF=gi:5839156 /DB_XREF=est:ws41d12.x1 /CLONE=IMAGE:2499767 /UG=Hs.184581 ESTs </td> <td> AI992251 </td> <td> ribosomal protein S6 kinase, 90kDa, polypeptide 2 </td> <td> RPS6KA2 </td> <td> 6196 </td> <td> NM_001006932 /// NM_021135 /// XM_005267092 /// XM_006715549 </td> <td> 0001556 // oocyte maturation // inferred from electronic annotation /// 0002035 // brain renin-angiotensin system // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045835 // negative regulation of meiosis // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060047 // heart contraction // inferred from electronic annotation /// 0070613 // regulation of protein processing // inferred from electronic annotation /// 0071322 // cellular response to carbohydrate stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004711 // ribosomal protein S6 kinase activity // inferred from electronic annotation /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -194.95 </td> <td> 377.15 </td> <td> -14.73 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 200898_s_at </td> <td> 200898_s_at </td> <td> AK002091 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK002091.1 /DEF=Homo sapiens cDNA FLJ11229 fis, clone PLACE1008356, highly similar to Homo sapiens mRNA for KIAA0679 protein.  /FEA=mRNA /DB_XREF=gi:7023763 /UG=Hs.5734 meningioma expressed antigen 5 (hyaluronidase) /FL=gb:AF036144.2 gb:NM_012215.1 </td> <td> AK002091 </td> <td> meningioma expressed antigen 5 (hyaluronidase) </td> <td> MGEA5 </td> <td> 10724 </td> <td> NM_001142434 /// NM_012215 /// XR_246060 </td> <td> 0006044 // N-acetylglucosamine metabolic process // inferred from electronic annotation /// 0006516 // glycoprotein catabolic process // traceable author statement /// 0006612 // protein targeting to membrane // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from electronic annotation /// 0010616 // negative regulation of cardiac muscle adaptation // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0031343 // positive regulation of cell killing // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0043243 // positive regulation of protein complex disassembly // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from electronic annotation /// 0046060 // dATP metabolic process // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from electronic annotation /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051901 // positive regulation of mitochondrial depolarization // inferred from electronic annotation /// 0051928 // positive regulation of calcium ion transport // inferred from electronic annotation /// 0060051 // negative regulation of protein glycosylation // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation /// 0070265 // necrotic cell death // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004415 // hyalurononglucosaminidase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation </td> <td> -270.60 </td> <td> 247.15 </td> <td> -14.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 209852_x_at </td> <td> 209852_x_at </td> <td> BC001423 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001423.1 /DEF=Homo sapiens, Similar to proteaseome (prosome, macropain) 28 subunit, 3, clone MGC:1394, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to proteaseome (prosome, macropain) 28subunit, 3 /DB_XREF=gi:12655138 /UG=Hs.152978 proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) /FL=gb:BC001423.1 gb:BC002684.1 </td> <td> BC001423 </td> <td> proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) </td> <td> PSME3 </td> <td> 10197 </td> <td> NM_001267045 /// NM_005789 /// NM_176863 /// NR_049772 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010950 // positive regulation of endopeptidase activity // inferred from direct assay /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0061136 // regulation of proteasomal protein catabolic process // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008537 // proteasome activator complex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0002039 // p53 binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0061133 // endopeptidase activator activity // inferred from direct assay /// 0097371 // MDM2/MDM4 family protein binding // inferred from direct assay </td> <td> 160.12 </td> <td> 291.26 </td> <td> 14.51 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 219270_at </td> <td> 219270_at </td> <td> NM_024111 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024111.1 /DEF=Homo sapiens hypothetical protein MGC4504 (MGC4504), mRNA. /FEA=mRNA /GEN=MGC4504 /PROD=hypothetical protein MGC4504 /DB_XREF=gi:13129125 /UG=Hs.155569 hypothetical protein MGC4504 /FL=gb:BC001847.1 gb:NM_024111.1 </td> <td> NM_024111 </td> <td> ChaC, cation transport regulator homolog 1 (E. coli) </td> <td> CHAC1 </td> <td> 79094 </td> <td> NM_001142776 /// NM_024111 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0010955 // negative regulation of protein processing // inferred from mutant phenotype /// 0022008 // neurogenesis // inferred from sequence or structural similarity /// 0045746 // negative regulation of Notch signaling pathway // inferred from mutant phenotype /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from direct assay </td> <td> 0005112 // Notch binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction </td> <td> -154.25 </td> <td> 93.20 </td> <td> -14.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 212266_s_at </td> <td> 212266_s_at </td> <td> AW084582 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW084582 /FEA=EST /DB_XREF=gi:6039734 /DB_XREF=est:wz26h03.x1 /CLONE=IMAGE:2559221 /UG=Hs.166975 splicing factor, arginineserine-rich 5 </td> <td> AW084582 </td> <td> serine/arginine-rich splicing factor 5 </td> <td> SRSF5 </td> <td> 6430 </td> <td> NM_001039465 /// NM_006925 /// XM_005267998 /// XM_005267999 /// XM_005268000 /// XM_005268001 /// XR_429326 /// XR_429327 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0009611 // response to wounding // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050733 // RS domain binding // inferred from electronic annotation </td> <td> 275.52 </td> <td> 250.34 </td> <td> 14.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 204404_at </td> <td> 204404_at </td> <td> NM_001046 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001046.1 /DEF=Homo sapiens solute carrier family 12 (sodiumpotassiumchloride transporters), member 2 (SLC12A2), mRNA.  /FEA=mRNA /GEN=SLC12A2 /PROD=solute carrier family 12(sodiumpotassiumchloride transporters), member 2 /DB_XREF=gi:4506974 /UG=Hs.110736 solute carrier family 12 (sodiumpotassiumchloride transporters), member 2 /FL=gb:NM_001046.1 gb:U30246.1 </td> <td> NM_001046 </td> <td> solute carrier family 12 (sodium/potassium/chloride transporter), member 2 </td> <td> SLC12A2 </td> <td> 6558 </td> <td> NM_001046 /// NM_001256461 /// NR_046207 </td> <td> 0006810 // transport // traceable author statement /// 0006811 // ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0006972 // hyperosmotic response // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0015696 // ammonium transport // inferred from direct assay /// 0030321 // transepithelial chloride transport // inferred from direct assay /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0045795 // positive regulation of cell volume // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060763 // mammary duct terminal end bud growth // inferred from electronic annotation /// 0070634 // transepithelial ammonium transport // inferred from direct assay /// 0072488 // ammonium transmembrane transport // inferred from direct assay /// 1902476 // chloride transmembrane transport // inferred from electronic annotation /// 1902476 // chloride transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008511 // sodium:potassium:chloride symporter activity // inferred from electronic annotation /// 0008519 // ammonium transmembrane transporter activity // inferred from direct assay /// 0015293 // symporter activity // inferred from electronic annotation /// 0015377 // cation:chloride symporter activity // inferred from electronic annotation </td> <td> -523.23 </td> <td> 406.49 </td> <td> -14.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 203313_s_at </td> <td> 203313_s_at </td> <td> NM_003244 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003244.1 /DEF=Homo sapiens TG-interacting factor (TALE family homeobox) (TGIF), mRNA.  /FEA=mRNA /GEN=TGIF /PROD=TG-interacting factor (TALE family homeobox) /DB_XREF=gi:4507472 /UG=Hs.90077 TG-interacting factor (TALE family homeobox) /FL=gb:BC000814.1 gb:NM_003244.1 gb:AF179900.1 </td> <td> NM_003244 </td> <td> TGFB-induced factor homeobox 1 </td> <td> TGIF1 </td> <td> 7050 </td> <td> NM_001278682 /// NM_001278684 /// NM_001278686 /// NM_003244 /// NM_170695 /// NM_173207 /// NM_173208 /// NM_173209 /// NM_173210 /// NM_173211 /// NM_174886 /// XM_005258135 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010470 // regulation of gastrulation // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0038092 // nodal signaling pathway // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0070410 // co-SMAD binding // inferred from electronic annotation </td> <td> -206.25 </td> <td> 262.98 </td> <td> -14.17 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 217947_at </td> <td> 217947_at </td> <td> NM_017801 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017801.1 /DEF=Homo sapiens hypothetical protein FLJ20396 (FLJ20396), mRNA. /FEA=mRNA /GEN=FLJ20396 /PROD=hypothetical protein FLJ20396 /DB_XREF=gi:8923369 /UG=Hs.283685 hypothetical protein FLJ20396 /FL=gb:BC002797.1 gb:NM_017801.1 </td> <td> NM_017801 </td> <td> CKLF-like MARVEL transmembrane domain containing 6 </td> <td> CMTM6 </td> <td> 54918 </td> <td> NM_017801 </td> <td> 0006935 // chemotaxis // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005125 // cytokine activity // inferred from electronic annotation </td> <td> 149.05 </td> <td> 502.12 </td> <td> 13.97 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 200797_s_at </td> <td> 200797_s_at </td> <td> AI275690 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI275690 /FEA=EST /DB_XREF=gi:3897964 /DB_XREF=est:qw03a03.x1 /CLONE=IMAGE:1989964 /UG=Hs.86386 myeloid cell leukemia sequence 1 (BCL2-related) /FL=gb:NM_021960.1 gb:AF118124.1 </td> <td> AI275690 </td> <td> myeloid cell leukemia 1 </td> <td> MCL1 </td> <td> 4170 </td> <td> NM_001197320 /// NM_021960 /// NM_182763 </td> <td> 0001709 // cell fate determination // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // not recorded /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0019725 // cellular homeostasis // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0071806 // protein transmembrane transport // traceable author statement /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype /// 0097194 // execution phase of apoptosis // inferred from direct assay /// 1900118 // negative regulation of execution phase of apoptosis // traceable author statement /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype /// 2001020 // regulation of response to DNA damage stimulus // inferred from mutant phenotype /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // not recorded </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // not recorded /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0097136 // Bcl-2 family protein complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015266 // protein channel activity // traceable author statement /// 0042803 // protein homodimerization activity // not recorded /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0051434 // BH3 domain binding // inferred from physical interaction </td> <td> 517.40 </td> <td> 492.02 </td> <td> 13.93 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 209265_s_at </td> <td> 209265_s_at </td> <td> BC001650 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001650.1 /DEF=Homo sapiens, Similar to putative methyltransferase, clone MGC:2708, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to putative methyltransferase /DB_XREF=gi:12804482 /UG=Hs.268149 putative methyltransferase /FL=gb:BC003031.1 gb:BC001650.1 gb:NM_019852.1 </td> <td> BC001650 </td> <td> methyltransferase like 3 </td> <td> METTL3 </td> <td> 56339 </td> <td> NM_019852 /// XM_006720206 </td> <td> 0001510 // RNA methylation // inferred from mutant phenotype /// 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from sequence or structural similarity /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0019827 // stem cell maintenance // inferred from sequence or structural similarity /// 0032259 // methylation // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0061157 // mRNA destabilization // inferred from sequence or structural similarity /// 0080009 // mRNA methylation // inferred from direct assay /// 0080009 // mRNA methylation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from direct assay /// 0036396 // MIS complex // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016422 // mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity // inferred from direct assay /// 0016422 // mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 109.60 </td> <td> 96.92 </td> <td> 13.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 203156_at </td> <td> 203156_at </td> <td> NM_016248 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016248.1 /DEF=Homo sapiens A-kinase anchoring protein 220 (LOC51707), mRNA. /FEA=mRNA /GEN=LOC51707 /PROD=A-kinase anchoring protein 220 /DB_XREF=gi:7706456 /UG=Hs.232076 A kinase (PRKA) anchor protein 11 /FL=gb:AF176555.1 gb:NM_016248.1 </td> <td> NM_016248 </td> <td> A kinase (PRKA) anchor protein 11 </td> <td> AKAP11 </td> <td> 11215 </td> <td> NM_016248 /// NM_144490 /// XM_005266247 /// XM_005266248 /// XM_005266249 /// XM_005266250 </td> <td> 0035556 // intracellular signal transduction // traceable author statement </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0008157 // protein phosphatase 1 binding // traceable author statement /// 0051018 // protein kinase A binding // traceable author statement </td> <td> 193.70 </td> <td> 186.65 </td> <td> 13.87 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 213671_s_at </td> <td> 213671_s_at </td> <td> AA621558 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA621558 /FEA=EST /DB_XREF=gi:2525497 /DB_XREF=est:af53a09.s1 /CLONE=IMAGE:1035352 /UG=Hs.279946 methionine-tRNA synthetase </td> <td> AA621558 </td> <td> methionyl-tRNA synthetase /// microRNA 6758 </td> <td> MARS /// MIR6758 </td> <td> 4141 /// 102465454 </td> <td> NM_004990 /// NR_106816 /// XM_006719398 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006431 // methionyl-tRNA aminoacylation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004825 // methionine-tRNA ligase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -195.55 </td> <td> 261.77 </td> <td> -13.80 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 219210_s_at </td> <td> 219210_s_at </td> <td> NM_016530 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016530.1 /DEF=Homo sapiens RAB-8b protein (LOC51762), mRNA. /FEA=mRNA /GEN=LOC51762 /PROD=RAB-8b protein /DB_XREF=gi:7706562 /UG=Hs.321245 RAB-8b protein /FL=gb:AB038995.1 gb:NM_016530.1 </td> <td> NM_016530 </td> <td> RAB8B, member RAS oncogene family </td> <td> RAB8B </td> <td> 51762 </td> <td> NM_016530 /// XM_006720569 </td> <td> 0006184 // GTP catabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0015031 // protein transport // non-traceable author statement /// 0019882 // antigen processing and presentation // inferred from mutant phenotype /// 0031346 // positive regulation of cell projection organization // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from sequence or structural similarity /// 0045046 // protein import into peroxisome membrane // inferred from direct assay /// 0051461 // positive regulation of corticotropin secretion // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045335 // phagocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0051286 // cell tip // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay /// 0030911 // TPR domain binding // inferred from electronic annotation </td> <td> -158.12 </td> <td> 187.64 </td> <td> -13.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 208706_s_at </td> <td> 208706_s_at </td> <td> AK026933 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026933.1 /DEF=Homo sapiens cDNA: FLJ23280 fis, clone HEP07194. /FEA=mRNA /DB_XREF=gi:10439907 /UG=Hs.286236 eukaryotic translation initiation factor 5 /FL=gb:AL080102.1 </td> <td> AK026933 </td> <td> eukaryotic translation initiation factor 5 </td> <td> EIF5 </td> <td> 1983 </td> <td> NM_001969 /// NM_183004 </td> <td> 0006184 // GTP catabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // non-traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // non-traceable author statement /// 0003924 // GTPase activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 212.78 </td> <td> 340.86 </td> <td> 13.55 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201266_at </td> <td> 201266_at </td> <td> NM_003330 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003330.1 /DEF=Homo sapiens thioredoxin reductase 1 (TXNRD1), mRNA. /FEA=mRNA /GEN=TXNRD1 /PROD=thioredoxin reductase 1 /DB_XREF=gi:4507746 /UG=Hs.13046 thioredoxin reductase 1 /FL=gb:D88687.1 gb:AF077367.1 gb:NM_003330.1 gb:AF208018.1 </td> <td> NM_003330 </td> <td> thioredoxin reductase 1 </td> <td> TXNRD1 </td> <td> 7296 </td> <td> NM_001093771 /// NM_001261445 /// NM_001261446 /// NM_003330 /// NM_182729 /// NM_182742 /// NM_182743 </td> <td> 0001707 // mesoderm formation // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006790 // sulfur compound metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007369 // gastrulation // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010269 // response to selenium ion // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016259 // selenocysteine metabolic process // inferred from electronic annotation /// 0042191 // methylmercury metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042537 // benzene-containing compound metabolic process // inferred from electronic annotation /// 0042744 // hydrogen peroxide catabolic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070276 // halogen metabolic process // inferred from electronic annotation /// 0070995 // NADPH oxidation // inferred from electronic annotation /// 0071280 // cellular response to copper ion // inferred from electronic annotation /// 0071455 // cellular response to hyperoxia // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0004791 // thioredoxin-disulfide reductase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016174 // NAD(P)H oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016668 // oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor // inferred from electronic annotation /// 0033797 // selenate reductase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0045340 // mercury ion binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation </td> <td> -1045.80 </td> <td> 1982.05 </td> <td> -13.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 217724_at </td> <td> 217724_at </td> <td> AF131807 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF131807.1 /DEF=Homo sapiens clone 25076 mRNA sequence. /FEA=mRNA /DB_XREF=gi:4406639 /UG=Hs.165998 PAI-1 mRNA-binding protein /FL=gb:AL080119.1 gb:NM_015640.1 </td> <td> AF131807 </td> <td> SERPINE1 mRNA binding protein 1 </td> <td> SERBP1 </td> <td> 26135 </td> <td> NM_001018067 /// NM_001018068 /// NM_001018069 /// NM_015640 </td> <td> 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 434.90 </td> <td> 839.77 </td> <td> 13.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201917_s_at </td> <td> 201917_s_at </td> <td> AI694452 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI694452 /FEA=EST /DB_XREF=gi:4971792 /DB_XREF=est:wd83h07.x1 /CLONE=IMAGE:2338237 /UG=Hs.42484 hypothetical protein FLJ10618 /FL=gb:NM_018155.1 </td> <td> AI694452 </td> <td> solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 </td> <td> SLC25A36 </td> <td> 55186 </td> <td> NM_001104647 /// NM_018155 /// XM_005247575 /// XM_006713685 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -211.33 </td> <td> 199.46 </td> <td> -13.51 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 203127_s_at </td> <td> 203127_s_at </td> <td> BC005123 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005123.1 /DEF=Homo sapiens, serine palmitoyltransferase, long chain base subunit 2, clone MGC:10362, mRNA, complete cds.  /FEA=mRNA /PROD=serine palmitoyltransferase, long chain basesubunit 2 /DB_XREF=gi:13477298 /UG=Hs.59403 serine palmitoyltransferase, long chain base subunit 2 /FL=gb:BC005123.1 gb:AB011098.1 gb:NM_004863.1 </td> <td> BC005123 </td> <td> serine palmitoyltransferase, long chain base subunit 2 </td> <td> SPTLC2 </td> <td> 9517 </td> <td> NM_004863 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006686 // sphingomyelin biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046511 // sphinganine biosynthetic process // inferred from electronic annotation /// 0046512 // sphingosine biosynthetic process // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0017059 // serine C-palmitoyltransferase complex // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation </td> <td> -156.40 </td> <td> 258.88 </td> <td> -13.50 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 215446_s_at </td> <td> 215446_s_at </td> <td> L16895 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:L16895 /DEF=Human lysyl oxidase (LOX) gene, exon 7 /FEA=mRNA /DB_XREF=gi:292923 /UG=Hs.102267 lysyl oxidase </td> <td> L16895 </td> <td> lysyl oxidase </td> <td> LOX </td> <td> 4015 </td> <td> NM_001178102 /// NM_002317 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0048251 // elastic fiber assembly // inferred from electronic annotation /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0004720 // protein-lysine 6-oxidase activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016641 // oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -264.80 </td> <td> 287.75 </td> <td> -13.49 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201448_at </td> <td> 201448_at </td> <td> AL046419 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL046419 /FEA=EST /DB_XREF=gi:5434493 /DB_XREF=est:DKFZp434N247_s1 /CLONE=DKFZp434N247 /UG=Hs.239489 TIA1 cytotoxic granule-associated RNA-binding protein /FL=gb:NM_022037.1 gb:M77142.1 </td> <td> AL046419 </td> <td> TIA1 cytotoxic granule-associated RNA binding protein </td> <td> TIA1 </td> <td> 7072 </td> <td> NM_022037 /// NM_022173 /// XM_005264524 /// XM_005264525 /// XM_005264526 /// XM_005264527 /// XM_005264528 /// XM_005264530 /// XM_005264531 /// XM_005264532 /// XM_005264533 /// XR_244953 /// XR_244954 /// XR_244955 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0042036 // negative regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0048024 // regulation of mRNA splicing, via spliceosome // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0097165 // nuclear stress granule // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 126.40 </td> <td> 103.75 </td> <td> 13.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 205542_at </td> <td> 205542_at </td> <td> NM_012449 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012449.1 /DEF=Homo sapiens six transmembrane epithelial antigen of the prostate (STEAP), mRNA.  /FEA=mRNA /GEN=STEAP /PROD=six transmembrane epithelial antigen of theprostate /DB_XREF=gi:9558758 /UG=Hs.61635 six transmembrane epithelial antigen of the prostate /FL=gb:AF186249.1 gb:NM_012449.1 </td> <td> NM_012449 </td> <td> six transmembrane epithelial antigen of the prostate 1 </td> <td> STEAP1 </td> <td> 26872 </td> <td> NM_012449 </td> <td> 0006811 // ion transport // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005911 // cell-cell junction // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005215 // transporter activity // traceable author statement /// 0015267 // channel activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 236.60 </td> <td> 216.78 </td> <td> 13.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 210371_s_at </td> <td> 210371_s_at </td> <td> BC003092 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003092.1 /DEF=Homo sapiens, Similar to retinoblastoma binding protein 4, clone MGC:1393, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to retinoblastoma binding protein 4 /DB_XREF=gi:13111850 /UG=Hs.16003 retinoblastoma-binding protein 4 /FL=gb:BC003092.1 gb:NM_005610.1 </td> <td> BC003092 </td> <td> retinoblastoma binding protein 4 </td> <td> RBBP4 </td> <td> 5928 </td> <td> NM_001135255 /// NM_001135256 /// NM_005610 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006334 // nucleosome assembly // traceable author statement /// 0006335 // DNA replication-dependent nucleosome assembly // inferred from direct assay /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0031497 // chromatin assembly // inferred from direct assay /// 0034080 // centromere-specific nucleosome assembly // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0051726 // regulation of cell cycle // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0016580 // Sin3 complex // non-traceable author statement /// 0016581 // NuRD complex // inferred from direct assay /// 0016581 // NuRD complex // non-traceable author statement /// 0016589 // NURF complex // inferred from direct assay /// 0033186 // CAF-1 complex // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042393 // histone binding // non-traceable author statement /// 0042826 // histone deacetylase binding // inferred from physical interaction </td> <td> 188.65 </td> <td> 235.65 </td> <td> 13.43 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 203063_at </td> <td> 203063_at </td> <td> NM_014634 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014634.1 /DEF=Homo sapiens KIAA0015 gene product (KIAA0015), mRNA. /FEA=mRNA /GEN=KIAA0015 /PROD=KIAA0015 gene product /DB_XREF=gi:7661861 /UG=Hs.278441 KIAA0015 gene product /FL=gb:D13640.1 gb:NM_014634.1 </td> <td> NM_014634 </td> <td> protein phosphatase, Mg2+/Mn2+ dependent, 1F </td> <td> PPM1F </td> <td> 9647 </td> <td> NM_014634 </td> <td> 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010634 // positive regulation of epithelial cell migration // inferred from mutant phenotype /// 0010811 // positive regulation of cell-substrate adhesion // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016576 // histone dephosphorylation // inferred from electronic annotation /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0035970 // peptidyl-threonine dephosphorylation // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0044387 // negative regulation of protein kinase activity by regulation of protein phosphorylation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045927 // positive regulation of growth // inferred from mutant phenotype /// 0050921 // positive regulation of chemotaxis // inferred from mutant phenotype /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0051894 // positive regulation of focal adhesion assembly // inferred from mutant phenotype /// 0097193 // intrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0005829 // cytosol // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 201.90 </td> <td> 156.33 </td> <td> 13.38 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 217094_s_at </td> <td> 217094_s_at </td> <td> AL109923 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL109923 /DEF=Human DNA sequence from clone RP3-468O1 on chromosome 20 Contains ESTs, STSs, GSSs and CpG islands. Contains a gene for the atrophin 1 interacting protein 4 (AIP4), a ferredoxin 1 (FDX1) pseudogene and part of a gene for an ortholog of Rattus norv... /FEA=CDS /DB_XREF=gi:8894632 /UG=Hs.98074 atrophin-1 interacting protein 4 </td> <td> AL109923 </td> <td> itchy E3 ubiquitin protein ligase </td> <td> ITCH </td> <td> 83737 </td> <td> NM_001257137 /// NM_001257138 /// NM_031483 /// XM_005260570 /// XM_006723881 /// XM_006723882 /// XR_244153 /// XR_430315 </td> <td> 0000209 // protein polyubiquitination // inferred from electronic annotation /// 0001558 // regulation of cell growth // non-traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0002669 // positive regulation of T cell anergy // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0035519 // protein K29-linked ubiquitination // inferred from direct assay /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from sequence or structural similarity /// 0046642 // negative regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0046718 // viral entry into host cell // traceable author statement /// 0050687 // negative regulation of defense response to virus // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0090085 // regulation of protein deubiquitination // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // not recorded /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // non-traceable author statement /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0043021 // ribonucleoprotein complex binding // inferred from physical interaction /// 0045236 // CXCR chemokine receptor binding // inferred from physical interaction </td> <td> -124.37 </td> <td> 134.91 </td> <td> -13.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 209099_x_at </td> <td> 209099_x_at </td> <td> U73936 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U73936.1 /DEF=Homo sapiens Jagged 1 (HJ1) mRNA, complete cds. /FEA=mRNA /GEN=HJ1 /PROD=Jagged 1 /DB_XREF=gi:1695273 /UG=Hs.91143 jagged 1 (Alagille syndrome) /FL=gb:U61276.1 gb:U73936.1 gb:AF003837.1 gb:AF028593.1 gb:NM_000214.1 </td> <td> U73936 </td> <td> jagged 1 </td> <td> JAG1 </td> <td> 182 </td> <td> NM_000214 </td> <td> 0001525 // angiogenesis // non-traceable author statement /// 0001709 // cell fate determination // non-traceable author statement /// 0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0002456 // T cell mediated immunity // inferred from mutant phenotype /// 0003184 // pulmonary valve morphogenesis // inferred from mutant phenotype /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0007154 // cell communication // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0030097 // hemopoiesis // non-traceable author statement /// 0030216 // keratinocyte differentiation // non-traceable author statement /// 0030334 // regulation of cell migration // non-traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0035909 // aorta morphogenesis // inferred from sequence or structural similarity /// 0042127 // regulation of cell proliferation // non-traceable author statement /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0045445 // myoblast differentiation // non-traceable author statement /// 0045446 // endothelial cell differentiation // non-traceable author statement /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045639 // positive regulation of myeloid cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048839 // inner ear development // inferred from electronic annotation /// 0060411 // cardiac septum morphogenesis // inferred from sequence or structural similarity /// 0061156 // pulmonary artery morphogenesis // inferred from mutant phenotype /// 0061309 // cardiac neural crest cell development involved in outflow tract morphogenesis // inferred from sequence or structural similarity /// 0061314 // Notch signaling involved in heart development // inferred by curator /// 0061314 // Notch signaling involved in heart development // inferred from mutant phenotype /// 0061444 // endocardial cushion cell development // inferred from sequence or structural similarity /// 0072017 // distal tubule development // inferred from electronic annotation /// 0072070 // loop of Henle development // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation </td> <td> 0005112 // Notch binding // non-traceable author statement /// 0005198 // structural molecule activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // non-traceable author statement </td> <td> -1225.20 </td> <td> 868.88 </td> <td> -13.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 208693_s_at </td> <td> 208693_s_at </td> <td> D30658 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D30658.1 /DEF=Human T-cell mRNA for glycyl tRNA synthetase, complete cds. /FEA=mRNA /PROD=glycyl tRNA synthetase /DB_XREF=gi:577711 /UG=Hs.75280 glycyl-tRNA synthetase /FL=gb:D30658.1 gb:U09587.1 gb:NM_002047.1 </td> <td> D30658 </td> <td> glycyl-tRNA synthetase </td> <td> GARS </td> <td> 2617 </td> <td> NM_002047 /// XM_006715686 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006426 // glycyl-tRNA aminoacylation // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015966 // diadenosine tetraphosphate biosynthetic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0030141 // secretory granule // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004820 // glycine-tRNA ligase activity // inferred from direct assay /// 0004820 // glycine-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from direct assay </td> <td> -989.35 </td> <td> 1295.00 </td> <td> -13.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202842_s_at </td> <td> 202842_s_at </td> <td> AL080081 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL080081.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564F1862 (from clone DKFZp564F1862); complete cds.  /FEA=mRNA /GEN=DKFZp564F1862 /PROD=hypothetical protein /DB_XREF=gi:5262493 /UG=Hs.6790 DnaJ (Hsp40) homolog, subfamily B, member 9 /FL=gb:AF083247.1 gb:AL080081.1 gb:AB026908.1 gb:NM_012328.1 </td> <td> AL080081 </td> <td> DnaJ (Hsp40) homolog, subfamily B, member 9 </td> <td> DNAJB9 </td> <td> 4189 </td> <td> NM_012328 </td> <td> 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0051787 // misfolded protein binding // inferred from direct assay </td> <td> -583.98 </td> <td> 566.11 </td> <td> -13.30 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 203868_s_at </td> <td> 203868_s_at </td> <td> NM_001078 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001078.1 /DEF=Homo sapiens vascular cell adhesion molecule 1 (VCAM1), mRNA. /FEA=mRNA /GEN=VCAM1 /PROD=vascular cell adhesion molecule 1 /DB_XREF=gi:4507874 /UG=Hs.109225 vascular cell adhesion molecule 1 /FL=gb:M60335.1 gb:NM_001078.1 </td> <td> NM_001078 </td> <td> vascular cell adhesion molecule 1 </td> <td> VCAM1 </td> <td> 7412 </td> <td> NM_001078 /// NM_001199834 /// NM_080682 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0002526 // acute inflammatory response // inferred from electronic annotation /// 0002544 // chronic inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from direct assay /// 0007157 // heterophilic cell-cell adhesion // inferred from direct assay /// 0007159 // leukocyte cell-cell adhesion // inferred from direct assay /// 0007507 // heart development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0009308 // amine metabolic process // inferred from direct assay /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0022614 // membrane to membrane docking // inferred from expression pattern /// 0030183 // B cell differentiation // inferred by curator /// 0030198 // extracellular matrix organization // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0045471 // response to ethanol // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050901 // leukocyte tethering or rolling // inferred from expression pattern /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060669 // embryonic placenta morphogenesis // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation </td> <td> 0002102 // podosome // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071065 // alpha9-beta1 integrin-vascular cell adhesion molecule-1 complex // inferred from direct assay /// 0071944 // cell periphery // inferred from electronic annotation </td> <td> 0005178 // integrin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from mutant phenotype /// 0005515 // protein binding // inferred from electronic annotation /// 0008131 // primary amine oxidase activity // inferred from direct assay /// 0050839 // cell adhesion molecule binding // inferred from direct assay /// 0050839 // cell adhesion molecule binding // inferred from physical interaction </td> <td> -1690.55 </td> <td> 886.70 </td> <td> -13.26 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 203752_s_at </td> <td> 203752_s_at </td> <td> NM_005354 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005354.2 /DEF=Homo sapiens jun D proto-oncogene (JUND), mRNA. /FEA=mRNA /GEN=JUND /PROD=jun D proto-oncogene /DB_XREF=gi:10938013 /UG=Hs.2780 jun D proto-oncogene /FL=gb:NM_005354.2 </td> <td> NM_005354 </td> <td> jun D proto-oncogene </td> <td> JUND </td> <td> 3727 </td> <td> NM_001286968 /// NM_005354 </td> <td> 0002076 // osteoblast development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from electronic annotation </td> <td> 0000785 // chromatin // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016922 // ligand-dependent nuclear receptor binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay </td> <td> 392.13 </td> <td> 671.01 </td> <td> 13.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202084_s_at </td> <td> 202084_s_at </td> <td> NM_003003 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003003.1 /DEF=Homo sapiens SEC14 (S. cerevisiae)-like 1 (SEC14L1), mRNA. /FEA=mRNA /GEN=SEC14L1 /PROD=SEC14 (S. cerevisiae)-like 1 /DB_XREF=gi:4506866 /UG=Hs.75232 SEC14 (S. cerevisiae)-like 1 /FL=gb:D67029.1 gb:NM_003003.1 </td> <td> NM_003003 </td> <td> SEC14-like 1 (S. cerevisiae) </td> <td> SEC14L1 </td> <td> 6397 </td> <td> NM_001039573 /// NM_001143998 /// NM_001143999 /// NM_001144001 /// NM_001204408 /// NM_001204410 /// NM_003003 </td> <td> 0006810 // transport // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 375.05 </td> <td> 888.60 </td> <td> 13.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201738_at </td> <td> 201738_at </td> <td> NM_005875 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005875.1 /DEF=Homo sapiens translation factor sui1 homolog (GC20), mRNA. /FEA=mRNA /GEN=GC20 /PROD=translation factor sui1 homolog /DB_XREF=gi:5031710 /UG=Hs.21756 translation factor sui1 homolog /FL=gb:AF064607.1 gb:AF077052.1 gb:NM_005875.1 gb:AF263452.1 </td> <td> NM_005875 </td> <td> eukaryotic translation initiation factor 1B </td> <td> EIF1B </td> <td> 10289 </td> <td> NM_005875 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // non-traceable author statement </td> <td>  </td> <td> 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -213.83 </td> <td> 398.31 </td> <td> -13.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 209183_s_at </td> <td> 209183_s_at </td> <td> AL136653 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136653.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564P1263 (from clone DKFZp564P1263); complete cds.  /FEA=mRNA /GEN=DKFZp564P1263 /PROD=hypothetical protein /DB_XREF=gi:6807650 /UG=Hs.93675 decidual protein induced by progesterone /FL=gb:AB022718.1 gb:NM_007021.1 gb:AL136653.1 </td> <td> AL136653 </td> <td> chromosome 10 open reading frame 10 </td> <td> C10orf10 </td> <td> 11067 </td> <td> NM_007021 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from direct assay </td> <td>  </td> <td> -346.55 </td> <td> 547.58 </td> <td> -13.22 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202510_s_at </td> <td> 202510_s_at </td> <td> NM_006291 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006291.1 /DEF=Homo sapiens tumor necrosis factor, alpha-induced protein 2 (TNFAIP2), mRNA.  /FEA=mRNA /GEN=TNFAIP2 /PROD=tumor necrosis factor, alpha-induced protein 2 /DB_XREF=gi:5454133 /UG=Hs.101382 tumor necrosis factor, alpha-induced protein 2 /FL=gb:M92357.1 gb:NM_006291.1 </td> <td> NM_006291 </td> <td> tumor necrosis factor, alpha-induced protein 2 </td> <td> TNFAIP2 </td> <td> 7127 </td> <td> NM_006291 /// XM_006720243 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0000145 // exocyst // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement </td> <td>  </td> <td> -713.33 </td> <td> 475.86 </td> <td> -13.21 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 213489_at </td> <td> 213489_at </td> <td> BE671156 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE671156 /FEA=EST /DB_XREF=gi:10031697 /DB_XREF=est:7e46f09.x1 /CLONE=IMAGE:3285545 /UG=Hs.78335 microtubule-associated protein, RPEB family, member 2 </td> <td> BE671156 </td> <td> microtubule-associated protein, RP/EB family, member 2 </td> <td> MAPRE2 </td> <td> 10982 </td> <td> NM_001143826 /// NM_001143827 /// NM_001256420 /// NM_014268 /// NR_046177 /// XM_006722375 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation </td> <td> 186.67 </td> <td> 143.31 </td> <td> 13.18 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201939_at </td> <td> 201939_at </td> <td> NM_006622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006622.1 /DEF=Homo sapiens serum-inducible kinase (SNK), mRNA. /FEA=mRNA /GEN=SNK /PROD=serum-inducible kinase /DB_XREF=gi:5730054 /UG=Hs.3838 serum-inducible kinase /FL=gb:AF059617.1 gb:NM_006622.1 gb:AF223574.1 </td> <td> NM_006622 </td> <td> polo-like kinase 2 </td> <td> PLK2 </td> <td> 10769 </td> <td> NM_001252226 /// NM_006622 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007052 // mitotic spindle organization // inferred from direct assay /// 0007093 // mitotic cell cycle checkpoint // inferred from sequence or structural similarity /// 0007265 // Ras protein signal transduction // inferred from sequence or structural similarity /// 0007613 // memory // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0032486 // Rap protein signal transduction // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0046599 // regulation of centriole replication // inferred from direct assay /// 0046599 // regulation of centriole replication // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0060291 // long-term synaptic potentiation // inferred from sequence or structural similarity /// 0060292 // long term synaptic depression // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -294.75 </td> <td> 683.23 </td> <td> -13.15 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 200893_at </td> <td> 200893_at </td> <td> NM_004593 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004593.1 /DEF=Homo sapiens splicing factor, arginineserine-rich (transformer 2 Drosophila homolog) 10 (SFRS10), mRNA.  /FEA=mRNA /GEN=SFRS10 /PROD=splicing factor, arginineserine-rich(transformer 2 Drosophila homolog) 10 /DB_XREF=gi:4759097 /UG=Hs.30035 splicing factor, arginineserine-rich (transformer 2 Drosophila homolog) 10 /FL=gb:BC000160.1 gb:BC000451.1 gb:U61267.1 gb:U68063.1 gb:NM_004593.1 </td> <td> NM_004593 </td> <td> transformer 2 beta homolog (Drosophila) </td> <td> TRA2B </td> <td> 6434 </td> <td> NM_001243879 /// NM_004593 /// XM_005247703 /// XM_006713724 </td> <td> 0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0048026 // positive regulation of mRNA splicing, via spliceosome // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 362.95 </td> <td> 613.70 </td> <td> 13.05 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201542_at </td> <td> 201542_at </td> <td> AY008268 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AY008268.1 /DEF=Homo sapiens GTP-binding protein SAR1 (SAR1) mRNA, complete cds. /FEA=mRNA /GEN=SAR1 /PROD=GTP-binding protein SAR1 /DB_XREF=gi:10445220 /UG=Hs.110796 SAR1 protein /FL=gb:AY008268.1 gb:AL136724.1 gb:AF261717.1 gb:NM_020150.1 </td> <td> AY008268 </td> <td> secretion associated, Ras related GTPase 1A </td> <td> SAR1A </td> <td> 56681 </td> <td> NM_001142648 /// NM_020150 </td> <td> 0006184 // GTP catabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation </td> <td> 230.90 </td> <td> 249.90 </td> <td> 13.04 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 200758_s_at </td> <td> 200758_s_at </td> <td> AI361227 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI361227 /FEA=EST /DB_XREF=gi:4112848 /DB_XREF=est:qy12a07.x1 /CLONE=IMAGE:2011764 /UG=Hs.83469 nuclear factor (erythroid-derived 2)-like 1 /FL=gb:NM_003204.1 gb:U08853.1 </td> <td> AI361227 </td> <td> nuclear factor, erythroid 2-like 1 </td> <td> NFE2L1 </td> <td> 4779 </td> <td> NM_003204 /// XM_005257410 /// XM_005257411 /// XM_005257412 /// XM_005257413 /// XM_005257415 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006783 // heme biosynthetic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -377.48 </td> <td> 570.74 </td> <td> -13.03 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 217746_s_at </td> <td> 217746_s_at </td> <td> NM_013374 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013374.1 /DEF=Homo sapiens programmed cell death 6-interacting protein (PDCD6IP), mRNA.  /FEA=mRNA /GEN=PDCD6IP /PROD=programmed cell death 6-interacting protein /DB_XREF=gi:7019486 /UG=Hs.9663 programmed cell death 6-interacting protein /FL=gb:AF349951.1 gb:AF151793.1 gb:NM_013374.1 </td> <td> NM_013374 </td> <td> programmed cell death 6 interacting protein </td> <td> PDCD6IP </td> <td> 10015 </td> <td> NM_001162429 /// NM_001256192 /// NM_013374 /// NR_027867 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0001772 // immunological synapse // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> -200.77 </td> <td> 642.64 </td> <td> -13.03 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 209015_s_at </td> <td> 209015_s_at </td> <td> BC002446 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002446.1 /DEF=Homo sapiens, MRJ gene for a member of the DNAJ protein family, clone MGC:1152, mRNA, complete cds.  /FEA=mRNA /PROD=MRJ gene for a member of the DNAJ proteinfamily /DB_XREF=gi:12803262 /UG=Hs.181195 DnaJ (Hsp40) homolog, subfamily B, member 6 /FL=gb:BC002446.1 gb:AB015798.1 </td> <td> BC002446 </td> <td> DnaJ (Hsp40) homolog, subfamily B, member 6 </td> <td> DNAJB6 </td> <td> 10049 </td> <td> NM_005494 /// NM_058246 /// XM_005249515 /// XM_005249516 /// XM_006715823 </td> <td> 0006457 // protein folding // inferred from direct assay /// 0006986 // response to unfolded protein // non-traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0045109 // intermediate filament organization // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation /// 0060715 // syncytiotrophoblast cell differentiation involved in labyrinthine layer development // inferred from electronic annotation /// 0060717 // chorion development // inferred from electronic annotation /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030018 // Z disc // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0001671 // ATPase activator activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> -200.13 </td> <td> 215.61 </td> <td> -12.97 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201324_at </td> <td> 201324_at </td> <td> NM_001423 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001423.1 /DEF=Homo sapiens epithelial membrane protein 1 (EMP1), mRNA. /FEA=mRNA /GEN=EMP1 /PROD=epithelial membrane protein 1 /DB_XREF=gi:4503558 /UG=Hs.79368 epithelial membrane protein 1 /FL=gb:U77085.1 gb:U43916.1 gb:NM_001423.1 </td> <td> NM_001423 </td> <td> epithelial membrane protein 1 </td> <td> EMP1 </td> <td> 2012 </td> <td> NM_001423 </td> <td> 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0016049 // cell growth // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 284.67 </td> <td> 500.44 </td> <td> 12.96 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 212171_x_at </td> <td> 212171_x_at </td> <td> H95344 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:H95344 /FEA=EST /DB_XREF=gi:1102977 /DB_XREF=est:yu21b08.s1 /CLONE=IMAGE:234423 /UG=Hs.73793 vascular endothelial growth factor /FL=gb:AF214570.1 </td> <td> H95344 </td> <td> vascular endothelial growth factor A </td> <td> VEGFA </td> <td> 7422 </td> <td> NM_001025366 /// NM_001025367 /// NM_001025368 /// NM_001025369 /// NM_001025370 /// NM_001033756 /// NM_001171622 /// NM_001171623 /// NM_001171624 /// NM_001171625 /// NM_001171626 /// NM_001171627 /// NM_001171628 /// NM_001171629 /// NM_001171630 /// NM_001204384 /// NM_001204385 /// NM_001287044 /// NM_003376 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001525 // angiogenesis // inferred from direct assay /// 0001541 // ovarian follicle development // inferred from sequence or structural similarity /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // traceable author statement /// 0001666 // response to hypoxia // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from sequence or structural similarity /// 0001944 // vasculature development // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0002052 // positive regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0002575 // basophil chemotaxis // inferred from direct assay /// 0002576 // platelet degranulation // traceable author statement /// 0002687 // positive regulation of leukocyte migration // traceable author statement /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003169 // coronary vein morphogenesis // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007498 // mesoderm development // inferred from sequence or structural similarity /// 0007595 // lactation // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008360 // regulation of cell shape // inferred from direct assay /// 0009409 // response to cold // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030212 // hyaluronan metabolic process // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from direct assay /// 0030225 // macrophage differentiation // inferred from direct assay /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030855 // epithelial cell differentiation // inferred from sequence or structural similarity /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0031077 // post-embryonic camera-type eye development // inferred from sequence or structural similarity /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032147 // activation of protein kinase activity // inferred from direct assay /// 0032793 // positive regulation of CREB transcription factor activity // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0035148 // tube formation // inferred from direct assay /// 0035767 // endothelial cell chemotaxis // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0036303 // lymph vessel morphogenesis // inferred from sequence or structural similarity /// 0038033 // positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from direct assay /// 0038091 // positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway // inferred from direct assay /// 0038190 // VEGF-activated neuropilin signaling pathway // inferred from sequence or structural similarity /// 0040007 // growth // inferred from sequence or structural similarity /// 0042088 // T-helper 1 type immune response // inferred from electronic annotation /// 0042462 // eye photoreceptor cell development // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043069 // negative regulation of programmed cell death // inferred from electronic annotation /// 0043117 // positive regulation of vascular permeability // inferred from direct assay /// 0043129 // surfactant homeostasis // inferred from sequence or structural similarity /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045779 // negative regulation of bone resorption // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048469 // cell maturation // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048739 // cardiac muscle fiber development // inferred from sequence or structural similarity /// 0048754 // branching morphogenesis of an epithelial tube // inferred from sequence or structural similarity /// 0048842 // positive regulation of axon extension involved in axon guidance // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050918 // positive chemotaxis // inferred from direct assay /// 0050927 // positive regulation of positive chemotaxis // inferred from direct assay /// 0050930 // induction of positive chemotaxis // inferred from direct assay /// 0050930 // induction of positive chemotaxis // non-traceable author statement /// 0051272 // positive regulation of cellular component movement // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0060319 // primitive erythrocyte differentiation // inferred from sequence or structural similarity /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from sequence or structural similarity /// 0060754 // positive regulation of mast cell chemotaxis // inferred from direct assay /// 0060948 // cardiac vascular smooth muscle cell development // inferred from sequence or structural similarity /// 0060982 // coronary artery morphogenesis // inferred from sequence or structural similarity /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0061419 // positive regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071456 // cellular response to hypoxia // traceable author statement /// 0071542 // dopaminergic neuron differentiation // inferred from sequence or structural similarity /// 0071679 // commissural neuron axon guidance // inferred from sequence or structural similarity /// 0090037 // positive regulation of protein kinase C signaling // inferred from direct assay /// 0090050 // positive regulation of cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0090259 // regulation of retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 1900086 // positive regulation of peptidyl-tyrosine autophosphorylation // inferred from direct assay /// 1900745 // positive regulation of p38MAPK cascade // inferred from direct assay /// 1901492 // positive regulation of lymphangiogenesis // inferred from electronic annotation /// 1901727 // positive regulation of histone deacetylase activity // inferred from direct assay /// 1902336 // positive regulation of retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 1902533 // positive regulation of intracellular signal transduction // inferred from direct assay /// 1902966 // positive regulation of protein localization to early endosome // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation </td> <td> 0001968 // fibronectin binding // inferred from direct assay /// 0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005172 // vascular endothelial growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from sequence or structural similarity /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from mutant phenotype /// 0038191 // neuropilin binding // inferred from physical interaction /// 0042056 // chemoattractant activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0043183 // vascular endothelial growth factor receptor 1 binding // inferred from physical interaction /// 0043184 // vascular endothelial growth factor receptor 2 binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0048018 // receptor agonist activity // inferred from physical interaction /// 0050840 // extracellular matrix binding // inferred by curator </td> <td> -197.62 </td> <td> 168.91 </td> <td> -12.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 209295_at </td> <td> 209295_at </td> <td> AF016266 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF016266.1 /DEF=Homo sapiens TRAIL receptor 2 mRNA, complete cds. /FEA=mRNA /PROD=TRAIL receptor 2 /DB_XREF=gi:2529562 /UG=Hs.51233 tumor necrosis factor receptor superfamily, member 10b /FL=gb:BC001281.1 gb:AF018658.1 gb:AF016849.1 gb:AF016266.1 </td> <td> AF016266 </td> <td> tumor necrosis factor receptor superfamily, member 10b </td> <td> TNFRSF10B </td> <td> 8795 </td> <td> NM_003842 /// NM_147187 /// NR_027140 /// XM_006716409 </td> <td> 0006915 // apoptotic process // non-traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // non-traceable author statement /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // non-traceable author statement /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from mutant phenotype /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0097190 // apoptotic signaling pathway // traceable author statement /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred by curator </td> <td> 0004872 // receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0045569 // TRAIL binding // non-traceable author statement </td> <td> -362.98 </td> <td> 895.26 </td> <td> -12.89 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 218665_at </td> <td> 218665_at </td> <td> NM_012193 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012193.1 /DEF=Homo sapiens frizzled (Drosophila) homolog 4 (FZD4), mRNA. /FEA=mRNA /GEN=FZD4 /PROD=frizzled (Drosophila) homolog 4 /DB_XREF=gi:6912383 /UG=Hs.19545 frizzled (Drosophila) homolog 4 /FL=gb:AB032417.1 gb:NM_012193.1 </td> <td> NM_012193 </td> <td> frizzled class receptor 4 </td> <td> FZD4 </td> <td> 8322 </td> <td> NM_012193 </td> <td> 0001553 // luteinization // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // not recorded /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007223 // Wnt signaling pathway, calcium modulating pathway // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0009790 // embryo development //  /// 0010812 // negative regulation of cell-substrate adhesion // inferred from mutant phenotype /// 0016055 // Wnt signaling pathway // inferred from direct assay /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030947 // regulation of vascular endothelial growth factor receptor signaling pathway // not recorded /// 0031987 // locomotion involved in locomotory behavior // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // not recorded /// 0035426 // extracellular matrix-cell signaling // inferred from electronic annotation /// 0042701 // progesterone secretion // not recorded /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0060070 // canonical Wnt signaling pathway // inferred from direct assay /// 0061299 // retina vasculature morphogenesis in camera-type eye // inferred from mutant phenotype /// 0061301 // cerebellum vasculature morphogenesis // inferred from electronic annotation /// 0061304 // retinal blood vessel morphogenesis // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // not recorded /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred by curator /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement /// 0042995 // cell projection // not recorded /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // not recorded /// 0019955 // cytokine binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from direct assay /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042813 // Wnt-activated receptor activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> 256.02 </td> <td> 356.41 </td> <td> 12.84 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 202068_s_at </td> <td> 202068_s_at </td> <td> NM_000527 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000527.2 /DEF=Homo sapiens low density lipoprotein receptor (familial hypercholesterolemia) (LDLR), mRNA.  /FEA=mRNA /GEN=LDLR /PROD=low density lipoprotein receptor precursor /DB_XREF=gi:8051613 /UG=Hs.213289 low density lipoprotein receptor (familial hypercholesterolemia) /FL=gb:NM_000527.2 </td> <td> NM_000527 </td> <td> low density lipoprotein receptor </td> <td> LDLR </td> <td> 3949 </td> <td> NM_000527 /// NM_001195798 /// NM_001195799 /// NM_001195800 /// NM_001195802 /// NM_001195803 /// XR_244074 </td> <td> 0001523 // retinoid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0006897 // endocytosis // traceable author statement /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from sequence or structural similarity /// 0010899 // regulation of phosphatidylcholine catabolic process // inferred from sequence or structural similarity /// 0015914 // phospholipid transport // inferred from sequence or structural similarity /// 0016032 // viral process // inferred from electronic annotation /// 0030299 // intestinal cholesterol absorption // inferred from mutant phenotype /// 0030301 // cholesterol transport // inferred from mutant phenotype /// 0034383 // low-density lipoprotein particle clearance // inferred from mutant phenotype /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042159 // lipoprotein catabolic process // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0070508 // cholesterol import // inferred from sequence or structural similarity </td> <td> 0005764 // lysosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement /// 0034362 // low-density lipoprotein particle // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0001948 // glycoprotein binding // inferred from physical interaction /// 0005041 // low-density lipoprotein receptor activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030169 // low-density lipoprotein particle binding // inferred from electronic annotation /// 0030229 // very-low-density lipoprotein particle receptor activity // inferred from direct assay </td> <td> 257.57 </td> <td> 213.41 </td> <td> 12.82 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 201000_at </td> <td> 201000_at </td> <td> NM_001605 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001605.1 /DEF=Homo sapiens alanyl-tRNA synthetase (AARS), mRNA. /FEA=mRNA /GEN=AARS /PROD=alanyl-tRNA synthetase /DB_XREF=gi:4501840 /UG=Hs.75102 alanyl-tRNA synthetase /FL=gb:D32050.1 gb:NM_001605.1 </td> <td> NM_001605 </td> <td> alanyl-tRNA synthetase </td> <td> AARS </td> <td> 16 </td> <td> NM_001605 /// XM_006721153 </td> <td> 0001942 // hair follicle development // inferred from electronic annotation /// 0006400 // tRNA modification // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006419 // alanyl-tRNA aminoacylation // inferred from electronic annotation /// 0006450 // regulation of translational fidelity // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0008033 // tRNA processing // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0034620 // cellular response to unfolded protein // inferred from electronic annotation /// 0043039 // tRNA aminoacylation // inferred from electronic annotation /// 0043200 // response to amino acid // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0050905 // neuromuscular process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0002161 // aminoacyl-tRNA editing activity // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004813 // alanine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -350.48 </td> <td> 539.91 </td> <td> -12.79 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 206237_s_at </td> <td> 206237_s_at </td> <td> NM_013957 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013957.1 /DEF=Homo sapiens neuregulin 1 (NRG1), transcript variant HRG-beta2, mRNA.  /FEA=mRNA /GEN=NRG1 /PROD=neuregulin 1 isoform HRG-beta2 /DB_XREF=gi:7669513 /UG=Hs.172816 neuregulin 1 /FL=gb:M94167.1 gb:NM_013957.1 </td> <td> NM_013957 </td> <td> neuregulin 1 </td> <td> NRG1 </td> <td> 3084 </td> <td> NM_001159995 /// NM_001159996 /// NM_001159999 /// NM_001160001 /// NM_001160002 /// NM_001160004 /// NM_001160005 /// NM_001160007 /// NM_001160008 /// NM_004495 /// NM_013956 /// NM_013957 /// NM_013958 /// NM_013959 /// NM_013960 /// NM_013962 /// NM_013964 /// XM_005273485 /// XM_005273486 /// XM_005273487 /// XM_006716335 </td> <td> 0000165 // MAPK cascade // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0003161 // cardiac conduction system development // inferred from electronic annotation /// 0003222 // ventricular trabecula myocardium morphogenesis // inferred from direct assay /// 0007154 // cell communication // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from direct assay /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010667 // negative regulation of cardiac muscle cell apoptotic process // inferred from direct assay /// 0014032 // neural crest cell development // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0021781 // glial cell fate commitment // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030879 // mammary gland development // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038127 // ERBB signaling pathway // inferred from direct assay /// 0042060 // wound healing // inferred from direct assay /// 0042060 // wound healing // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation /// 0043496 // regulation of protein homodimerization activity // traceable author statement /// 0043497 // regulation of protein heterodimerization activity // inferred from direct assay /// 0043624 // cellular protein complex disassembly // inferred from genetic interaction /// 0045087 // innate immune response // traceable author statement /// 0045213 // neurotransmitter receptor metabolic process // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0051048 // negative regulation of secretion // inferred from direct assay /// 0051155 // positive regulation of striated muscle cell differentiation // inferred from sequence or structural similarity /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from sequence or structural similarity /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from direct assay /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0060379 // cardiac muscle cell myoblast differentiation // inferred from direct assay /// 0060956 // endocardial cell differentiation // inferred from direct assay /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from direct assay </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0003712 // transcription cofactor activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005125 // cytokine activity // traceable author statement /// 0005176 // ErbB-2 class receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // non-traceable author statement /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // inferred by curator /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // non-traceable author statement /// 0030971 // receptor tyrosine kinase binding // non-traceable author statement /// 0043125 // ErbB-3 class receptor binding // inferred from direct assay /// 0043125 // ErbB-3 class receptor binding // inferred from physical interaction </td> <td> -140.03 </td> <td> 93.24 </td> <td> -12.78 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 221891_x_at </td> <td> 221891_x_at </td> <td> AA704004 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA704004 /FEA=EST /DB_XREF=gi:2713922 /DB_XREF=est:ag46h11.s1 /CLONE=IMAGE:1119909 /UG=Hs.180414 heat shock 70kD protein 8 </td> <td> AA704004 </td> <td> heat shock 70kDa protein 8 /// small nucleolar RNA, C/D box 14C /// small nucleolar RNA, C/D box 14D </td> <td> HSPA8 /// SNORD14C /// SNORD14D </td> <td> 3312 /// 85389 /// 85390 </td> <td> NM_006597 /// NM_153201 /// NR_001453 /// NR_001454 /// XM_006718831 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006457 // protein folding // non-traceable author statement /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042026 // protein refolding // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 1902904 // negative regulation of fibril organization // inferred from direct assay </td> <td> 0000974 // Prp19 complex // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0061202 // clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016887 // ATPase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0023026 // MHC class II protein complex binding // inferred from direct assay /// 0031072 // heat shock protein binding // inferred from physical interaction /// 0042623 // ATPase activity, coupled // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from direct assay </td> <td> 1026.42 </td> <td> 1361.54 </td> <td> 12.77 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 204076_at </td> <td> 204076_at </td> <td> AB002390 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB002390.1 /DEF=Human mRNA for KIAA0392 gene, partial cds. /FEA=mRNA /GEN=KIAA0392 /DB_XREF=gi:2280487 /UG=Hs.201377 apyrase, lysosomal /FL=gb:AF016032.1 gb:NM_004901.1 </td> <td> AB002390 </td> <td> ectonucleoside triphosphate diphosphohydrolase 4 </td> <td> ENTPD4 </td> <td> 9583 </td> <td> NM_001128930 /// NM_004901 </td> <td> 0006256 // UDP catabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030173 // integral component of Golgi membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0016787 // hydrolase activity // inferred from electronic annotation /// 0017110 // nucleoside-diphosphatase activity // inferred from electronic annotation /// 0045134 // uridine-diphosphatase activity // inferred from direct assay </td> <td> 172.98 </td> <td> 121.29 </td> <td> 12.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.41 </td> </tr>
  <tr> <td> 221009_s_at </td> <td> 221009_s_at </td> <td> NM_016109 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016109.1 /DEF=Homo sapiens PPAR(gamma) angiopoietin related protein (PGAR), mRNA. /FEA=mRNA /GEN=PGAR /PROD=PPAR(gamma) angiopoietin related protein /DB_XREF=gi:7705828 /UG=Hs.9613 PPAR(gamma) angiopoietin related protein /FL=gb:AF153606.1 gb:NM_016109.1 </td> <td> NM_016109 </td> <td> angiopoietin-like 4 </td> <td> ANGPTL4 </td> <td> 51129 </td> <td> NM_001039667 /// NM_016109 /// NM_139314 /// NR_104213 /// XM_005272484 /// XM_005272485 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045766 // positive regulation of angiogenesis // traceable author statement /// 0051005 // negative regulation of lipoprotein lipase activity // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0070328 // triglyceride homeostasis // inferred from sequence or structural similarity /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0004857 // enzyme inhibitor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction </td> <td> -931.03 </td> <td> 525.19 </td> <td> -12.69 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 220731_s_at </td> <td> 220731_s_at </td> <td> NM_018090 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018090.1 /DEF=Homo sapiens hypothetical protein FLJ10420 (FLJ10420), mRNA. /FEA=mRNA /GEN=FLJ10420 /PROD=hypothetical protein FLJ10420 /DB_XREF=gi:8922415 /UG=Hs.289087 hypothetical protein FLJ10420 /FL=gb:NM_018090.1 </td> <td> NM_018090 </td> <td> NECAP endocytosis associated 2 </td> <td> NECAP2 </td> <td> 55707 </td> <td> NM_001145277 /// NM_001145278 /// NM_018090 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030125 // clathrin vesicle coat // inferred from sequence or structural similarity /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td>  </td> <td> -177.60 </td> <td> 404.60 </td> <td> -12.62 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202643_s_at </td> <td> 202643_s_at </td> <td> AI738896 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI738896 /FEA=EST /DB_XREF=gi:5100877 /DB_XREF=est:wi22g02.x1 /CLONE=IMAGE:2391026 /UG=Hs.211600 tumor necrosis factor, alpha-induced protein 3 /FL=gb:M59465.1 gb:NM_006290.1 </td> <td> AI738896 </td> <td> tumor necrosis factor, alpha-induced protein 3 </td> <td> TNFAIP3 </td> <td> 7128 </td> <td> NM_001270507 /// NM_001270508 /// NM_006290 /// XM_005267119 /// XM_006715555 </td> <td> 0001922 // B-1 B cell homeostasis // inferred from sequence or structural similarity /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0002634 // regulation of germinal center formation // inferred from sequence or structural similarity /// 0002677 // negative regulation of chronic inflammatory response // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0032691 // negative regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032720 // negative regulation of tumor necrosis factor production // inferred from sequence or structural similarity /// 0034136 // negative regulation of toll-like receptor 2 signaling pathway // non-traceable author statement /// 0034140 // negative regulation of toll-like receptor 3 signaling pathway // inferred from direct assay /// 0034144 // negative regulation of toll-like receptor 4 signaling pathway // non-traceable author statement /// 0034148 // negative regulation of toll-like receptor 5 signaling pathway // inferred from electronic annotation /// 0035871 // protein K11-linked deubiquitination // inferred from direct assay /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0045736 // negative regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0045779 // negative regulation of bone resorption // non-traceable author statement /// 0045824 // negative regulation of innate immune response // inferred from sequence or structural similarity /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050691 // regulation of defense response to virus by host // non-traceable author statement /// 0050728 // negative regulation of inflammatory response // inferred from sequence or structural similarity /// 0050869 // negative regulation of B cell activation // inferred from sequence or structural similarity /// 0051259 // protein oligomerization // non-traceable author statement /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0061043 // regulation of vascular wound healing // non-traceable author statement /// 0070301 // cellular response to hydrogen peroxide // inferred from sequence or structural similarity /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070429 // negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway // inferred from electronic annotation /// 0070433 // negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway // inferred from electronic annotation /// 0070536 // protein K63-linked deubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0072573 // tolerance induction to lipopolysaccharide // inferred from mutant phenotype /// 0090291 // negative regulation of osteoclast proliferation // non-traceable author statement /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 2000347 // positive regulation of hepatocyte proliferation // inferred from electronic annotation /// 2000349 // negative regulation of CD40 signaling pathway // inferred from mutant phenotype /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0043130 // ubiquitin binding // inferred from physical interaction /// 0043621 // protein self-association // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -206.45 </td> <td> 149.47 </td> <td> -12.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202499_s_at </td> <td> 202499_s_at </td> <td> NM_006931 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006931.1 /DEF=Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 3 (SLC2A3), mRNA.  /FEA=mRNA /GEN=SLC2A3 /PROD=solute carrier family 2 (facilitated glucosetransporter), member 3 /DB_XREF=gi:5902089 /UG=Hs.7594 solute carrier family 2 (facilitated glucose transporter), member 3 /FL=gb:M20681.1 gb:NM_006931.1 </td> <td> NM_006931 </td> <td> solute carrier family 2 (facilitated glucose transporter), member 3 </td> <td> SLC2A3 </td> <td> 6515 </td> <td> NM_006931 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation </td> <td> -234.22 </td> <td> 140.74 </td> <td> -12.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201865_x_at </td> <td> 201865_x_at </td> <td> AI432196 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI432196 /FEA=EST /DB_XREF=gi:4308490 /DB_XREF=est:tg77g05.x1 /CLONE=IMAGE:2114840 /UG=Hs.75772 nuclear receptor subfamily 3, group C, member 1 /FL=gb:M10901.1 gb:NM_000176.1 </td> <td> AI432196 </td> <td> nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) </td> <td> NR3C1 </td> <td> 2908 </td> <td> NM_000176 /// NM_001018074 /// NM_001018075 /// NM_001018076 /// NM_001018077 /// NM_001020825 /// NM_001024094 /// NM_001204258 /// NM_001204259 /// NM_001204260 /// NM_001204261 /// NM_001204262 /// NM_001204263 /// NM_001204264 /// NM_001204265 /// XM_005268419 /// XM_005268420 /// XM_005268421 /// XM_005268422 /// XM_005268423 </td> <td> 0006111 // regulation of gluconeogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008211 // glucocorticoid metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0031946 // regulation of glucocorticoid biosynthetic process // inferred from electronic annotation /// 0042921 // glucocorticoid receptor signaling pathway // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043402 // glucocorticoid mediated signaling pathway // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004883 // glucocorticoid receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -281.70 </td> <td> 266.40 </td> <td> -12.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 208893_s_at </td> <td> 208893_s_at </td> <td> BC005047 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005047.1 /DEF=Homo sapiens, clone MGC:12852, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:12852) /DB_XREF=gi:13477170 /UG=Hs.180383 dual specificity phosphatase 6 /FL=gb:BC003562.1 gb:BC003143.1 gb:BC005047.1 gb:AB013382.1 gb:NM_001946.1 </td> <td> BC005047 </td> <td> dual specificity phosphatase 6 </td> <td> DUSP6 </td> <td> 1848 </td> <td> NM_001946 /// NM_022652 </td> <td> 0000188 // inactivation of MAPK activity // inferred from direct assay /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // not recorded /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // not recorded /// 0042493 // response to drug // inferred from electronic annotation /// 0042663 // regulation of endodermal cell fate specification // not recorded /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051409 // response to nitrosative stress // inferred from expression pattern /// 0060420 // regulation of heart growth // not recorded /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070848 // response to growth factor // inferred from electronic annotation </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from direct assay </td> <td> -377.72 </td> <td> 430.49 </td> <td> -12.58 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 211956_s_at </td> <td> 211956_s_at </td> <td> BF246436 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF246436 /FEA=EST /DB_XREF=gi:11160799 /DB_XREF=est:601854870F1 /CLONE=IMAGE:4074785 /UG=Hs.150580 putative translation initiation factor </td> <td> BF246436 </td> <td> eukaryotic translation initiation factor 1 </td> <td> EIF1 </td> <td> 10209 </td> <td> NM_005801 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0006950 // response to stress // non-traceable author statement /// 0009048 // dosage compensation by inactivation of X chromosome // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement </td> <td> 0003743 // translation initiation factor activity // non-traceable author statement /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1282.10 </td> <td> 3401.43 </td> <td> -12.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218736_s_at </td> <td> 218736_s_at </td> <td> NM_017734 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017734.1 /DEF=Homo sapiens hypothetical protein FLJ20271 (FLJ20271), mRNA. /FEA=mRNA /GEN=FLJ20271 /PROD=hypothetical protein FLJ20271 /DB_XREF=gi:8923242 /UG=Hs.14606 hypothetical protein FLJ20271 /FL=gb:NM_017734.1 </td> <td> NM_017734 </td> <td> palmdelphin </td> <td> PALMD </td> <td> 54873 </td> <td> NM_017734 </td> <td> 0008360 // regulation of cell shape // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 173.65 </td> <td> 237.75 </td> <td> 12.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212230_at </td> <td> 212230_at </td> <td> AV725664 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV725664 /FEA=EST /DB_XREF=gi:10831279 /DB_XREF=est:AV725664 /CLONE=HTCAOD07 /UG=Hs.173717 Homo sapiens phosphatidic acid phosphatase type 2B (PPAP2B), mRNA </td> <td> AV725664 </td> <td> phosphatidic acid phosphatase type 2B </td> <td> PPAP2B </td> <td> 8613 </td> <td> NM_003713 /// NM_177414 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0008354 // germ cell migration // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0030111 // regulation of Wnt signaling pathway // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0034109 // homotypic cell-cell adhesion // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0044328 // canonical Wnt signaling pathway involved in positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0044329 // canonical Wnt signaling pathway involved in positive regulation of cell-cell adhesion // inferred from mutant phenotype /// 0044330 // canonical Wnt signaling pathway involved in positive regulation of wound healing // inferred from mutant phenotype /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0060070 // canonical Wnt signaling pathway // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005912 // adherens junction // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // traceable author statement /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008195 // phosphatidate phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042577 // lipid phosphatase activity // inferred from electronic annotation </td> <td> -198.10 </td> <td> 176.55 </td> <td> -12.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202353_s_at </td> <td> 202353_s_at </td> <td> NM_002816 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002816.1 /DEF=Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 (PSMD12), mRNA.  /FEA=mRNA /GEN=PSMD12 /PROD=proteasome (prosome, macropain) 26S subunit,non-ATPase, 12 /DB_XREF=gi:4506220 /UG=Hs.4295 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 /FL=gb:AB003103.1 gb:NM_002816.1 </td> <td> NM_002816 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 </td> <td> PSMD12 </td> <td> 5718 </td> <td> NM_002816 /// NM_174871 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005838 // proteasome regulatory particle // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 156.15 </td> <td> 163.62 </td> <td> 12.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 205205_at </td> <td> 205205_at </td> <td> NM_006509 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006509.1 /DEF=Homo sapiens v-rel avian reticuloendotheliosis viral oncogene homolog B (nuclear factor of kappa light polypeptide gene enhancer in B-cells 3) (RELB), mRNA.  /FEA=mRNA /GEN=RELB /PROD=v-rel avian reticuloendotheliosis viral oncogenehomolog B (nuclear factor of kappa light polypeptide geneenhancer in B-cells 3) /DB_XREF=gi:5730006 /UG=Hs.858 v-rel avian reticuloendotheliosis viral oncogene homolog B (nuclear factor of kappa light polypeptide gene enhancer in B-cells 3) /FL=gb:M83221.1 gb:NM_006509.1 </td> <td> NM_006509 </td> <td> v-rel avian reticuloendotheliosis viral oncogene homolog B </td> <td> RELB </td> <td> 5971 </td> <td> NM_006509 /// XM_005259127 /// XM_005259128 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0042088 // T-helper 1 type immune response // inferred from electronic annotation /// 0043011 // myeloid dendritic cell differentiation // inferred from electronic annotation /// 0045063 // T-helper 1 cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0001047 // core promoter binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -165.30 </td> <td> 119.40 </td> <td> -12.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 37028_at </td> <td> 37028_at </td> <td> U83981 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. U83981:Homo sapiens apoptosis associated protein (GADD34) mRNA, complete cds /cds=(222,2246) /gb=U83981 /gi=3258617 /ug=Hs.76556 /len=2331 </td> <td> U83981 </td> <td> protein phosphatase 1, regulatory subunit 15A </td> <td> PPP1R15A </td> <td> 23645 </td> <td> NM_014330 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> -369.27 </td> <td> 369.49 </td> <td> -12.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 211676_s_at </td> <td> 211676_s_at </td> <td> AF056979 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF056979.1 /DEF=Homo sapiens clone YAN1 interferon-gamma receptor mRNA, complete cds.  /FEA=mRNA /PROD=interferon-gamma receptor /DB_XREF=gi:13562048 /FL=gb:AF056979.1 </td> <td> AF056979 </td> <td> interferon gamma receptor 1 </td> <td> IFNGR1 </td> <td> 3459 </td> <td> NM_000416 /// XM_006715470 /// XM_006715471 </td> <td> 0007165 // signal transduction // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation </td> <td> 0004906 // interferon-gamma receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019955 // cytokine binding // inferred from electronic annotation </td> <td> -159.68 </td> <td> 167.34 </td> <td> -12.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212907_at </td> <td> 212907_at </td> <td> AI972416 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI972416 /FEA=EST /DB_XREF=gi:5769332 /DB_XREF=est:wr39d10.x1 /CLONE=IMAGE:2490067 /UG=Hs.24385 Human hbc647 mRNA sequence </td> <td> AI972416 </td> <td> solute carrier family 30 (zinc transporter), member 1 </td> <td> SLC30A1 </td> <td> 7779 </td> <td> NM_021194 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from sequence or structural similarity /// 0006874 // cellular calcium ion homeostasis // inferred from sequence or structural similarity /// 0006882 // cellular zinc ion homeostasis // inferred from sequence or structural similarity /// 0046929 // negative regulation of neurotransmitter secretion // inferred from sequence or structural similarity /// 0055085 // transmembrane transport // traceable author statement /// 0070509 // calcium ion import // inferred from electronic annotation /// 0070574 // cadmium ion transmembrane transport // inferred from sequence or structural similarity /// 0071577 // zinc ion transmembrane transport // inferred from electronic annotation /// 0071584 // negative regulation of zinc ion transmembrane import // inferred from sequence or structural similarity /// 0071585 // detoxification of cadmium ion // inferred from electronic annotation /// 0090281 // negative regulation of calcium ion import // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030315 // T-tubule // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0005385 // zinc ion transmembrane transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation /// 0019855 // calcium channel inhibitor activity // inferred from sequence or structural similarity </td> <td> -304.25 </td> <td> 349.88 </td> <td> -12.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212412_at </td> <td> 212412_at </td> <td> AV715767 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV715767 /FEA=EST /DB_XREF=gi:10797284 /DB_XREF=est:AV715767 /CLONE=DCBATH02 /UG=Hs.7780 Homo sapiens mRNA; cDNA DKFZp564A072 (from clone DKFZp564A072) </td> <td> AV715767 </td> <td> PDZ and LIM domain 5 </td> <td> PDLIM5 </td> <td> 10611 </td> <td> NM_001011513 /// NM_001011515 /// NM_001011516 /// NM_001256425 /// NM_001256426 /// NM_001256427 /// NM_001256428 /// NM_001256429 /// NM_006457 /// NR_046186 /// XM_005262693 /// XM_005262695 /// XM_005262696 /// XM_005262698 /// XM_006714066 /// XM_006714067 /// XM_006714068 /// XM_006714069 /// XM_006714070 </td> <td> 0051963 // regulation of synapse assembly // inferred from sequence or structural similarity /// 0061001 // regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042805 // actinin binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 494.80 </td> <td> 713.77 </td> <td> 12.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202464_s_at </td> <td> 202464_s_at </td> <td> NM_004566 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004566.1 /DEF=Homo sapiens 6-phosphofructo-2-kinasefructose-2,6-biphosphatase 3 (PFKFB3), mRNA.  /FEA=mRNA /GEN=PFKFB3 /PROD=6-phosphofructo-2-kinasefructose-2,6-biphosphatase 3 /DB_XREF=gi:4758899 /UG=Hs.195471 6-phosphofructo-2-kinasefructose-2,6-biphosphatase 3 /FL=gb:D49817.1 gb:AF109735.1 gb:NM_004566.1 </td> <td> NM_004566 </td> <td> 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 </td> <td> PFKFB3 </td> <td> 5209 </td> <td> NM_001145443 /// NM_001282630 /// NM_004566 /// XM_005252463 /// XM_005252464 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006000 // fructose metabolic process // inferred from electronic annotation /// 0006003 // fructose 2,6-bisphosphate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006096 // glycolytic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046835 // carbohydrate phosphorylation // inferred from electronic annotation /// 0046835 // carbohydrate phosphorylation // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // non-traceable author statement /// 0004331 // fructose-2,6-bisphosphate 2-phosphatase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -443.00 </td> <td> 349.95 </td> <td> -12.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212118_at </td> <td> 212118_at </td> <td> AL523814 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL523814 /FEA=EST /DB_XREF=gi:12787307 /DB_XREF=est:AL523814 /CLONE=CS0DC003YH03 (3 prime) /UG=Hs.142653 ret finger protein /FL=gb:AF230393.1 gb:J03407.1 gb:NM_006510.1 </td> <td> AL523814 </td> <td> tripartite motif containing 27 </td> <td> TRIM27 </td> <td> 5987 </td> <td> NM_006510 /// NM_030950 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002820 // negative regulation of adaptive immune response // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0032720 // negative regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0032897 // negative regulation of viral transcription // inferred from direct assay /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from direct assay /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0045087 // innate immune response // inferred from direct assay /// 0045814 // negative regulation of gene expression, epigenetic // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0070206 // protein trimerization // inferred from direct assay /// 0070534 // protein K63-linked ubiquitination // inferred from mutant phenotype /// 0072643 // interferon-gamma secretion // inferred from mutant phenotype /// 0090281 // negative regulation of calcium ion import // inferred from mutant phenotype /// 1900041 // negative regulation of interleukin-2 secretion // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016605 // PML body // inferred from electronic annotation /// 0030904 // retromer complex // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // traceable author statement </td> <td> 114.53 </td> <td> 121.84 </td> <td> 12.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212796_s_at </td> <td> 212796_s_at </td> <td> BF195608 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF195608 /FEA=EST /DB_XREF=gi:11082676 /DB_XREF=est:7n85f03.x1 /CLONE=IMAGE:3571349 /UG=Hs.126084 KIAA1055 protein </td> <td> BF195608 </td> <td> TBC1 domain family, member 2B </td> <td> TBC1D2B </td> <td> 23102 </td> <td> NM_015079 /// NM_144572 /// XM_005254242 </td> <td> 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td>  </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> 117.50 </td> <td> 121.47 </td> <td> 12.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 213227_at </td> <td> 213227_at </td> <td> BE879873 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE879873 /FEA=EST /DB_XREF=gi:10328649 /DB_XREF=est:601491389F1 /CLONE=IMAGE:3893302 /UG=Hs.9071 progesterone membrane binding protein </td> <td> BE879873 </td> <td> progesterone receptor membrane component 2 </td> <td> PGRMC2 </td> <td> 10424 </td> <td> NM_006320 </td> <td> 0043401 // steroid hormone mediated signaling pathway // traceable author statement </td> <td> 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003707 // steroid hormone receptor activity // traceable author statement /// 0005496 // steroid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation </td> <td> 99.85 </td> <td> 77.65 </td> <td> 12.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203275_at </td> <td> 203275_at </td> <td> NM_002199 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002199.2 /DEF=Homo sapiens interferon regulatory factor 2 (IRF2), mRNA. /FEA=mRNA /GEN=IRF2 /PROD=interferon regulatory factor 2 /DB_XREF=gi:4755144 /UG=Hs.83795 interferon regulatory factor 2 /FL=gb:NM_002199.2 </td> <td> NM_002199 </td> <td> interferon regulatory factor 2 </td> <td> IRF2 </td> <td> 3660 </td> <td> NM_002199 /// XM_005262984 /// XM_005262986 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay </td> <td> 0000975 // regulatory region DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction </td> <td> -161.10 </td> <td> 176.07 </td> <td> -12.18 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203999_at </td> <td> 203999_at </td> <td> AV731490 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV731490 /FEA=EST /DB_XREF=gi:10840911 /DB_XREF=est:AV731490 /CLONE=HTFAZD04 /UG=Hs.154679 synaptotagmin I /FL=gb:M55047.1 gb:NM_005639.1 </td> <td> AV731490 </td> <td> synaptotagmin I </td> <td> SYT1 </td> <td> 6857 </td> <td> NM_001135805 /// NM_001135806 /// NM_001291901 /// NM_005639 /// XM_005269113 /// XM_006719576 </td> <td> 0005513 // detection of calcium ion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0014047 // glutamate secretion // traceable author statement /// 0016079 // synaptic vesicle exocytosis // inferred from electronic annotation /// 0017157 // regulation of exocytosis // traceable author statement /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from electronic annotation /// 0031340 // positive regulation of vesicle fusion // inferred from electronic annotation /// 0045956 // positive regulation of calcium ion-dependent exocytosis // inferred from electronic annotation /// 0048278 // vesicle docking // inferred from electronic annotation /// 0051260 // protein homooligomerization // traceable author statement /// 0051592 // response to calcium ion // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031045 // dense core granule // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042584 // chromaffin granule membrane // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation /// 0060201 // clathrin-sculpted acetylcholine transport vesicle membrane // traceable author statement /// 0060203 // clathrin-sculpted glutamate transport vesicle membrane // traceable author statement /// 0061202 // clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane // traceable author statement /// 0070083 // clathrin-sculpted monoamine transport vesicle membrane // traceable author statement </td> <td> 0000149 // SNARE binding // inferred from electronic annotation /// 0001786 // phosphatidylserine binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // traceable author statement /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // traceable author statement /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0017075 // syntaxin-1 binding // traceable author statement /// 0019905 // syntaxin binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay </td> <td> 117.90 </td> <td> 137.72 </td> <td> 12.16 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212300_at </td> <td> 212300_at </td> <td> AL049795 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049795 /DEF=Human DNA sequence from clone RP4-622L5 on chromosome 1p34.2-36.11. Contains the gene for importin alpha 7 (karyopherin), up to six novel genes and the 5 end of the EIF3S2 gene for eukaryotic translation initiation factor 3 beta. Contains ESTs, S... /FEA=mRNA_7 /DB_XREF=gi:6010175 /UG=Hs.83004 interleukin 14 </td> <td> AL049795 </td> <td> taxilin alpha </td> <td> TXLNA </td> <td> 200081 </td> <td> NM_175852 /// XM_005270594 /// XM_006710424 </td> <td> 0006887 // exocytosis // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0042113 // B cell activation // inferred from electronic annotation </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0005125 // cytokine activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019905 // syntaxin binding // inferred from electronic annotation /// 0030372 // high molecular weight B cell growth factor receptor binding // non-traceable author statement </td> <td> 149.80 </td> <td> 106.47 </td> <td> 12.07 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 211075_s_at </td> <td> 211075_s_at </td> <td> Z25521 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:Z25521.1 /DEF=H.sapiens integrin associated protein mRNA, complete CDS,. /FEA=mRNA /PROD=integrin associated protein /DB_XREF=gi:396704 /FL=gb:Z25521.1 </td> <td> Z25521 </td> <td> CD47 molecule </td> <td> CD47 </td> <td> 961 </td> <td> NM_001025079 /// NM_001025080 /// NM_001777 /// NM_198793 /// XM_005247908 /// XM_005247909 /// XR_241521 /// XR_241522 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008228 // opsonization // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0009617 // response to bacterium // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from direct assay /// 0030198 // extracellular matrix organization // traceable author statement /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050870 // positive regulation of T cell activation // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0070053 // thrombospondin receptor activity // inferred from physical interaction </td> <td> -288.70 </td> <td> 387.50 </td> <td> -12.05 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209102_s_at </td> <td> 209102_s_at </td> <td> AF019214 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF019214.1 /DEF=Homo sapiens HMG box containing protein 1 mRNA, complete cds. /FEA=mRNA /PROD=HMG box containing protein 1 /DB_XREF=gi:2460168 /UG=Hs.10882 HMG-box containing protein 1 /FL=gb:AF019214.1 </td> <td> AF019214 </td> <td> HMG-box transcription factor 1 </td> <td> HBP1 </td> <td> 26959 </td> <td> NM_001244262 /// NM_012257 /// XM_005250266 /// XM_005250267 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007050 // cell cycle arrest // non-traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0043268 // positive regulation of potassium ion transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -164.23 </td> <td> 235.24 </td> <td> -12.03 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 217106_x_at </td> <td> 217106_x_at </td> <td> AF091078 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF091078.1 /DEF=Homo sapiens clone 559 unknown mRNA, complete sequence. /FEA=mRNA /PROD=unknown /DB_XREF=gi:3859993 /UG=Hs.125819 putative dimethyladenosine transferase </td> <td> AF091078 </td> <td> DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae) </td> <td> DIMT1 </td> <td> 27292 </td> <td> NM_014473 </td> <td> 0000154 // rRNA modification // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0031167 // rRNA methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000179 // rRNA (adenine-N6,N6-)-dimethyltransferase activity // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008649 // rRNA methyltransferase activity // inferred from electronic annotation /// 0016433 // rRNA (adenine) methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0052909 // 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity // inferred from electronic annotation </td> <td> 112.78 </td> <td> 243.26 </td> <td> 11.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 205846_at </td> <td> 205846_at </td> <td> NM_002837 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002837.1 /DEF=Homo sapiens protein tyrosine phosphatase, receptor type, B (PTPRB), mRNA.  /FEA=mRNA /GEN=PTPRB /PROD=protein tyrosine phosphatase, receptor type, B /DB_XREF=gi:4506304 /UG=Hs.123641 protein tyrosine phosphatase, receptor type, B /FL=gb:NM_002837.1 </td> <td> NM_002837 </td> <td> protein tyrosine phosphatase, receptor type, B </td> <td> PTPRB </td> <td> 5787 </td> <td> NM_001109754 /// NM_001206971 /// NM_001206972 /// NM_002837 /// XM_006719528 /// XM_006719529 /// XM_006719530 /// XR_245948 /// XR_245949 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0016311 // dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement </td> <td> 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> -282.25 </td> <td> 300.40 </td> <td> -11.95 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 214948_s_at </td> <td> 214948_s_at </td> <td> AL050136 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL050136.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586L141 (from clone DKFZp586L141). /FEA=mRNA /DB_XREF=gi:4884346 /UG=Hs.140945 Homo sapiens mRNA; cDNA DKFZp586L141 (from clone DKFZp586L141) </td> <td> AL050136 </td> <td> TATA element modulatory factor 1 </td> <td> TMF1 </td> <td> 7110 </td> <td> NM_007114 </td> <td> 0001675 // acrosome assembly // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation /// 0007289 // spermatid nucleus differentiation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0032275 // luteinizing hormone secretion // inferred from electronic annotation /// 0033327 // Leydig cell differentiation // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0061136 // regulation of proteasomal protein catabolic process // inferred from sequence or structural similarity /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 2000845 // positive regulation of testosterone secretion // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 131.38 </td> <td> 169.64 </td> <td> 11.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203038_at </td> <td> 203038_at </td> <td> NM_002844 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002844.1 /DEF=Homo sapiens protein tyrosine phosphatase, receptor type, K (PTPRK), mRNA.  /FEA=mRNA /GEN=PTPRK /PROD=protein tyrosine phosphatase, receptor type, K /DB_XREF=gi:4506316 /UG=Hs.79005 protein tyrosine phosphatase, receptor type, K /FL=gb:L77886.1 gb:NM_002844.1 </td> <td> NM_002844 </td> <td> protein tyrosine phosphatase, receptor type, K </td> <td> PTPRK </td> <td> 5796 </td> <td> NM_001135648 /// NM_001291981 /// NM_001291982 /// NM_001291983 /// NM_001291984 /// NM_002844 /// XM_005267082 /// XM_005267085 /// XM_005267086 /// XM_006715535 /// XM_006715536 /// XM_006715537 /// XM_006715538 /// XM_006715539 /// XM_006715540 /// XM_006715541 /// XM_006725019 /// XM_006725020 /// XM_006725021 /// XM_006725022 /// XM_006725023 /// XM_006725024 /// XM_006725025 /// XM_006725026 /// XM_006725027 </td> <td> 0006470 // protein dephosphorylation // inferred from direct assay /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010839 // negative regulation of keratinocyte proliferation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0031175 // neuron projection development // inferred from electronic annotation /// 0034394 // protein localization to cell surface // inferred from direct assay /// 0034614 // cellular response to reactive oxygen species // inferred from direct assay /// 0034644 // cellular response to UV // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0048041 // focal adhesion assembly // inferred from mutant phenotype </td> <td> 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031256 // leading edge membrane // inferred from direct assay /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0045295 // gamma-catenin binding // inferred from physical interaction </td> <td> -723.20 </td> <td> 840.45 </td> <td> -11.89 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 205047_s_at </td> <td> 205047_s_at </td> <td> NM_001673 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001673.1 /DEF=Homo sapiens asparagine synthetase (ASNS), mRNA. /FEA=mRNA /GEN=ASNS /PROD=asparagine synthetase /DB_XREF=gi:4502258 /UG=Hs.75692 asparagine synthetase /FL=gb:M27396.1 gb:NM_001673.1 </td> <td> NM_001673 </td> <td> asparagine synthetase (glutamine-hydrolyzing) </td> <td> ASNS </td> <td> 440 </td> <td> NM_001178075 /// NM_001178076 /// NM_001178077 /// NM_001673 /// NM_133436 /// NM_183356 </td> <td> 0001889 // liver development // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006529 // asparagine biosynthetic process // inferred by curator /// 0006529 // asparagine biosynthetic process // inferred from direct assay /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031427 // response to methotrexate // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032354 // response to follicle-stimulating hormone // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043200 // response to amino acid // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045931 // positive regulation of mitotic cell cycle // inferred from direct assay /// 0070981 // L-asparagine biosynthetic process // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004066 // asparagine synthase (glutamine-hydrolyzing) activity // not recorded /// 0004066 // asparagine synthase (glutamine-hydrolyzing) activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation </td> <td> -433.57 </td> <td> 258.11 </td> <td> -11.86 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212473_s_at </td> <td> 212473_s_at </td> <td> BE965029 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE965029 /FEA=EST /DB_XREF=gi:11768976 /DB_XREF=est:601658812R1 /CLONE=IMAGE:3886131 /UG=Hs.198793 Homo sapiens cDNA: FLJ22463 fis, clone HRC10126 </td> <td> BE965029 </td> <td> microtubule associated monooxygenase, calponin and LIM domain containing 2 </td> <td> MICAL2 </td> <td> 9645 </td> <td> NM_001282663 /// NM_001282664 /// NM_001282665 /// NM_001282666 /// NM_001282667 /// NM_001282668 /// NM_014632 /// XM_005253249 /// XM_005253251 /// XM_006718391 /// XM_006718392 /// XM_006718393 </td> <td> 0001947 // heart looping // inferred from sequence or structural similarity /// 0007010 // cytoskeleton organization // inferred from direct assay /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0010735 // positive regulation of transcription via serum response element binding // inferred from mutant phenotype /// 0019417 // sulfur oxidation // inferred from direct assay /// 0019417 // sulfur oxidation // inferred from sequence or structural similarity /// 0030042 // actin filament depolymerization // inferred from direct assay /// 0030042 // actin filament depolymerization // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from direct assay /// 0003779 // actin binding // inferred from sequence or structural similarity /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen // inferred from sequence or structural similarity /// 0043914 // NADPH:sulfur oxidoreductase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from sequence or structural similarity </td> <td> 338.62 </td> <td> 707.44 </td> <td> 11.84 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203380_x_at </td> <td> 203380_x_at </td> <td> NM_006925 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006925.1 /DEF=Homo sapiens splicing factor, arginineserine-rich 5 (SFRS5), mRNA. /FEA=mRNA /GEN=SFRS5 /PROD=splicing factor, arginineserine-rich 5 /DB_XREF=gi:5902077 /UG=Hs.166975 splicing factor, arginineserine-rich 5 /FL=gb:U30827.1 gb:NM_006925.1 </td> <td> NM_006925 </td> <td> serine/arginine-rich splicing factor 5 </td> <td> SRSF5 </td> <td> 6430 </td> <td> NM_001039465 /// NM_006925 /// XM_005267998 /// XM_005267999 /// XM_005268000 /// XM_005268001 /// XR_429326 /// XR_429327 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0009611 // response to wounding // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050733 // RS domain binding // inferred from electronic annotation </td> <td> 240.05 </td> <td> 174.97 </td> <td> 11.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 206028_s_at </td> <td> 206028_s_at </td> <td> NM_006343 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006343.1 /DEF=Homo sapiens c-mer proto-oncogene tyrosine kinase (MERTK), mRNA. /FEA=mRNA /GEN=MERTK /PROD=c-mer proto-oncogene tyrosine kinase /DB_XREF=gi:5453737 /UG=Hs.306178 c-mer proto-oncogene tyrosine kinase /FL=gb:U08023.1 gb:NM_006343.1 </td> <td> NM_006343 </td> <td> MER proto-oncogene, tyrosine kinase </td> <td> MERTK </td> <td> 10461 </td> <td> NM_006343 /// XM_005263565 /// XM_005263568 </td> <td> 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006909 // phagocytosis // inferred from mutant phenotype /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0032940 // secretion by cell // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from electronic annotation /// 0043491 // protein kinase B signaling // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0051250 // negative regulation of lymphocyte activation // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0060068 // vagina development // inferred from electronic annotation </td> <td> 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016028 // rhabdomere // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 131.62 </td> <td> 136.69 </td> <td> 11.82 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 221877_at </td> <td> 221877_at </td> <td> BF508835 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF508835 /FEA=EST /DB_XREF=gi:11592133 /DB_XREF=est:UI-H-BI4-aor-d-03-0-UI.s1 /CLONE=IMAGE:3085853 /UG=Hs.6217 Homo sapiens cDNA FLJ12521 fis, clone NT2RM2001840 </td> <td> BF508835 </td> <td> immunity-related GTPase family, Q </td> <td> IRGQ </td> <td> 126298 </td> <td> NM_001007561 /// XM_005258515 /// XM_005258516 </td> <td>  </td> <td>  </td> <td>  </td> <td> 135.75 </td> <td> 82.20 </td> <td> 11.74 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 222088_s_at </td> <td> 222088_s_at </td> <td> AA778684 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA778684 /FEA=EST /DB_XREF=gi:2838015 /DB_XREF=est:af87g07.s1 /CLONE=1049052 /UG=Hs.7594 solute carrier family 2 (facilitated glucose transporter), member 3 </td> <td> AA778684 </td> <td> solute carrier family 2 (facilitated glucose transporter), member 14 /// solute carrier family 2 (facilitated glucose transporter), member 3 </td> <td> SLC2A14 /// SLC2A3 </td> <td> 6515 /// 144195 </td> <td> NM_001286233 /// NM_001286234 /// NM_001286235 /// NM_001286236 /// NM_001286237 /// NM_006931 /// NM_153449 /// XM_005253315 /// XM_005253317 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation </td> <td> -190.38 </td> <td> 141.69 </td> <td> -11.73 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 217938_s_at </td> <td> 217938_s_at </td> <td> NM_020122 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020122.1 /DEF=Homo sapiens potassium channel modulatory factor (DKFZP434L1021), mRNA.  /FEA=mRNA /GEN=DKFZP434L1021 /PROD=potassium channel modulatory factor /DB_XREF=gi:10047127 /UG=Hs.5392 potassium channel modulatory factor /FL=gb:NM_020122.1 gb:BC000178.2 </td> <td> NM_020122 </td> <td> potassium channel modulatory factor 1 </td> <td> KCMF1 </td> <td> 56888 </td> <td> NM_020122 /// XM_006712052 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td>  </td> <td> 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -257.33 </td> <td> 556.24 </td> <td> -11.69 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200770_s_at </td> <td> 200770_s_at </td> <td> J03202 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:J03202.1 /DEF=Human laminin B2 chain mRNA, complete cds. /FEA=mRNA /GEN=LAMB2 /DB_XREF=gi:186916 /UG=Hs.214982 laminin, gamma 1 (formerly LAMB2) /FL=gb:J03202.1 gb:NM_002293.2 </td> <td> J03202 </td> <td> laminin, gamma 1 (formerly LAMB2) </td> <td> LAMC1 </td> <td> 3915 </td> <td> NM_002293 </td> <td> 0006461 // protein complex assembly // inferred from direct assay /// 0007155 // cell adhesion // inferred from direct assay /// 0007411 // axon guidance // traceable author statement /// 0007492 // endoderm development // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031581 // hemidesmosome assembly // inferred from mutant phenotype /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005605 // basal lamina // inferred from electronic annotation /// 0005606 // laminin-1 complex // non-traceable author statement /// 0005606 // laminin-1 complex // traceable author statement /// 0005615 // extracellular space // non-traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0043259 // laminin-10 complex // traceable author statement /// 0043260 // laminin-11 complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005201 // extracellular matrix structural constituent // inferred from mutant phenotype /// 0005515 // protein binding // inferred from electronic annotation /// 0043208 // glycosphingolipid binding // inferred from electronic annotation </td> <td> -185.60 </td> <td> 345.38 </td> <td> -11.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 210405_x_at </td> <td> 210405_x_at </td> <td> AF153687 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF153687.1 /DEF=Homo sapiens Fas-like protein precusor mRNA, complete cds. /FEA=mRNA /PROD=Fas-like protein precusor /DB_XREF=gi:8489094 /UG=Hs.51233 tumor necrosis factor receptor superfamily, member 10b /FL=gb:AF012535.1 gb:AF012628.1 gb:AF018657.1 gb:AF020501.1 gb:AF022386.1 gb:AF016268.1 gb:NM_003842.1 gb:AF192548.1 gb:AF153687.1 </td> <td> AF153687 </td> <td> tumor necrosis factor receptor superfamily, member 10b </td> <td> TNFRSF10B </td> <td> 8795 </td> <td> NM_003842 /// NM_147187 /// NR_027140 /// XM_006716409 </td> <td> 0006915 // apoptotic process // non-traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // non-traceable author statement /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // non-traceable author statement /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from mutant phenotype /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0097190 // apoptotic signaling pathway // traceable author statement /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred by curator </td> <td> 0004872 // receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0045569 // TRAIL binding // non-traceable author statement </td> <td> -372.42 </td> <td> 314.84 </td> <td> -11.65 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 205644_s_at </td> <td> 205644_s_at </td> <td> NM_003096 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003096.1 /DEF=Homo sapiens small nuclear ribonucleoprotein polypeptide G (SNRPG), mRNA.  /FEA=mRNA /GEN=SNRPG /PROD=small nuclear ribonucleoprotein polypeptide G /DB_XREF=gi:4507132 /UG=Hs.77496 small nuclear ribonucleoprotein polypeptide G /FL=gb:BC000070.1 gb:NM_003096.1 </td> <td> NM_003096 </td> <td> small nuclear ribonucleoprotein polypeptide G </td> <td> SNRPG </td> <td> 6637 </td> <td> NM_003096 </td> <td> 0000245 // spliceosomal complex assembly // non-traceable author statement /// 0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008334 // histone mRNA metabolic process // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005683 // U7 snRNP // inferred from direct assay /// 0005685 // U1 snRNP // inferred from direct assay /// 0005687 // U4 snRNP // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // non-traceable author statement /// 0034709 // methylosome // inferred from direct assay /// 0034719 // SMN-Sm protein complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 234.43 </td> <td> 700.49 </td> <td> 11.62 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201652_at </td> <td> 201652_at </td> <td> NM_006837 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006837.1 /DEF=Homo sapiens COP9 (constitutive photomorphogenic, Arabidopsis, homolog) subunit 5 (COPS5), mRNA.  /FEA=mRNA /GEN=COPS5 /PROD=COP9 (constitutive photomorphogenic,Arabidopsis, homolog) subunit 5 /DB_XREF=gi:5803045 /UG=Hs.198767 COP9 (constitutive photomorphogenic, Arabidopsis, homolog) subunit 5 /FL=gb:BC001187.1 gb:BC001859.1 gb:U65928.1 gb:U70734.1 gb:NM_006837.1 </td> <td> NM_006837 </td> <td> COP9 signalosome subunit 5 </td> <td> COPS5 </td> <td> 10987 </td> <td> NM_006837 </td> <td> 0000338 // protein deneddylation // inferred from mutant phenotype /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0010388 // cullin deneddylation // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 1990182 // exosomal secretion // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // traceable author statement /// 0008021 // synaptic vesicle // inferred from direct assay /// 0008180 // COP9 signalosome // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003713 // transcription coactivator activity // traceable author statement /// 0003743 // translation initiation factor activity // traceable author statement /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from mutant phenotype /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 150.10 </td> <td> 191.88 </td> <td> 11.54 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 204020_at </td> <td> 204020_at </td> <td> BF739943 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF739943 /FEA=EST /DB_XREF=gi:12066607 /DB_XREF=est:7o41b04.x1 /CLONE=IMAGE:3576534 /UG=Hs.29117 purine-rich element binding protein A /FL=gb:M96684.1 gb:NM_005859.1 </td> <td> BF739943 </td> <td> purine-rich element binding protein A </td> <td> PURA </td> <td> 5813 </td> <td> NM_005859 </td> <td> 0006268 // DNA unwinding involved in DNA replication // inferred from direct assay /// 0006270 // DNA replication initiation // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0000784 // nuclear chromosome, telomeric region // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005662 // DNA replication factor A complex // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0000900 // translation repressor activity, nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003691 // double-stranded telomeric DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from sequence or structural similarity /// 0032422 // purine-rich negative regulatory element binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation </td> <td> 105.85 </td> <td> 115.67 </td> <td> 11.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218095_s_at </td> <td> 218095_s_at </td> <td> NM_018475 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018475.1 /DEF=Homo sapiens uncharacterized hypothalamus protein HTMP (LOC55858), mRNA.  /FEA=mRNA /GEN=LOC55858 /PROD=uncharacterized hypothalamus protein HTMP /DB_XREF=gi:8923860 /UG=Hs.236510 uncharacterized hypothalamus protein HTMP /FL=gb:BC003545.1 gb:AF220188.1 gb:NM_018475.1 gb:AF183409.1 </td> <td> NM_018475 </td> <td> transmembrane protein 165 </td> <td> TMEM165 </td> <td> 55858 </td> <td> NM_018475 /// NR_073070 /// XR_427522 </td> <td> 0006487 // protein N-linked glycosylation // inferred from mutant phenotype /// 0006874 // cellular calcium ion homeostasis // inferred from genetic interaction /// 0032472 // Golgi calcium ion transport // inferred from direct assay /// 0035751 // regulation of lysosomal lumen pH // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td>  </td> <td> 166.95 </td> <td> 189.95 </td> <td> 11.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212888_at </td> <td> 212888_at </td> <td> BG109746 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG109746 /FEA=EST /DB_XREF=gi:12603252 /DB_XREF=est:602280883F1 /CLONE=IMAGE:4368381 /UG=Hs.325625 Homo sapiens clone 23938 mRNA sequence </td> <td> BG109746 </td> <td> dicer 1, ribonuclease type III </td> <td> DICER1 </td> <td> 23405 </td> <td> NM_001195573 /// NM_001271282 /// NM_001291628 /// NM_030621 /// NM_177438 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010070 // zygote asymmetric cell division // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010626 // negative regulation of Schwann cell proliferation // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0014040 // positive regulation of Schwann cell differentiation // inferred from sequence or structural similarity /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021675 // nerve development // inferred from sequence or structural similarity /// 0021889 // olfactory bulb interneuron differentiation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030422 // production of siRNA involved in RNA interference // inferred from direct assay /// 0030423 // targeting of mRNA for destruction involved in RNA interference // inferred from mutant phenotype /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031054 // pre-miRNA processing // inferred from direct assay /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031641 // regulation of myelination // inferred from electronic annotation /// 0031643 // positive regulation of myelination // inferred from sequence or structural similarity /// 0032290 // peripheral nervous system myelin formation // inferred from sequence or structural similarity /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from sequence or structural similarity /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042487 // regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045069 // regulation of viral genome replication // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048713 // regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0055013 // cardiac muscle cell development // inferred from electronic annotation /// 0060119 // inner ear receptor cell development // inferred from electronic annotation /// 0060576 // intestinal epithelial cell development // inferred from electronic annotation /// 0070173 // regulation of enamel mineralization // inferred from electronic annotation /// 0071335 // hair follicle cell proliferation // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090501 // RNA phosphodiester bond hydrolysis // inferred from direct assay /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from direct assay /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation /// 2000630 // positive regulation of miRNA metabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016442 // RISC complex // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004525 // ribonuclease III activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016891 // endoribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0035198 // miRNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 132.28 </td> <td> 90.29 </td> <td> 11.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202071_at </td> <td> 202071_at </td> <td> NM_002999 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002999.1 /DEF=Homo sapiens syndecan 4 (amphiglycan, ryudocan) (SDC4), mRNA. /FEA=mRNA /GEN=SDC4 /PROD=syndecan 4 (amphiglycan, ryudocan) /DB_XREF=gi:4506860 /UG=Hs.252189 syndecan 4 (amphiglycan, ryudocan) /FL=gb:NM_002999.1 </td> <td> NM_002999 </td> <td> syndecan 4 </td> <td> SDC4 </td> <td> 6385 </td> <td> NM_002999 </td> <td> 0001523 // retinoid metabolic process // traceable author statement /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006027 // glycosaminoglycan catabolic process // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0005925 // focal adhesion // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043034 // costamere // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001968 // fibronectin binding // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0070053 // thrombospondin receptor activity // inferred from mutant phenotype </td> <td> -557.22 </td> <td> 452.09 </td> <td> -11.51 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 217858_s_at </td> <td> 217858_s_at </td> <td> NM_016607 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016607.1 /DEF=Homo sapiens ALEX3 protein (ALEX3), mRNA. /FEA=mRNA /GEN=ALEX3 /PROD=ALEX3 protein /DB_XREF=gi:7705273 /UG=Hs.172788 ALEX3 protein /FL=gb:AB039669.1 gb:NM_016607.1 </td> <td> NM_016607 </td> <td> armadillo repeat containing, X-linked 3 </td> <td> ARMCX3 </td> <td> 51566 </td> <td> NM_016607 /// NM_177947 /// NM_177948 /// XM_005262141 </td> <td> 0034613 // cellular protein localization // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031307 // integral component of mitochondrial outer membrane // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 119.70 </td> <td> 165.45 </td> <td> 11.51 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 221534_at </td> <td> 221534_at </td> <td> AF073483 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF073483.1 /DEF=Homo sapiens p5326 mRNA, complete cds. /FEA=mRNA /PROD=p5326 /DB_XREF=gi:12002057 /UG=Hs.93678 Homo sapiens, clone IMAGE:3640823, mRNA, partial cds /FL=gb:AF073483.1 </td> <td> AF073483 </td> <td> chromosome 11 open reading frame 68 </td> <td> C11orf68 </td> <td> 83638 </td> <td> NM_001135635 /// NM_031450 </td> <td>  </td> <td>  </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 126.00 </td> <td> 93.45 </td> <td> 11.50 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201987_at </td> <td> 201987_at </td> <td> AI984051 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI984051 /FEA=EST /DB_XREF=gi:5811270 /DB_XREF=est:wt52h03.x1 /CLONE=IMAGE:2511125 /UG=Hs.11861 thyroid hormone receptor-associated protein, 240 kDa subunit /FL=gb:AF117754.1 gb:NM_005121.1 </td> <td> AI984051 </td> <td> mediator complex subunit 13 </td> <td> MED13 </td> <td> 9969 </td> <td> NM_005121 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016592 // mediator complex // inferred from direct assay </td> <td> 0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004872 // receptor activity // inferred from direct assay /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay </td> <td> 145.65 </td> <td> 165.65 </td> <td> 11.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 204285_s_at </td> <td> 204285_s_at </td> <td> AI857639 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI857639 /FEA=EST /DB_XREF=gi:5511255 /DB_XREF=est:wk95g09.x1 /CLONE=IMAGE:2423200 /UG=Hs.96 phorbol-12-myristate-13-acetate-induced protein 1 /FL=gb:NM_021127.1 </td> <td> AI857639 </td> <td> phorbol-12-myristate-13-acetate-induced protein 1 </td> <td> PMAIP1 </td> <td> 5366 </td> <td> NM_021127 </td> <td> 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010498 // proteasomal protein catabolic process // inferred from direct assay /// 0010907 // positive regulation of glucose metabolic process // inferred from direct assay /// 0010917 // negative regulation of mitochondrial membrane potential // inferred from sequence or structural similarity /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0042149 // cellular response to glucose starvation // inferred from mutant phenotype /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043331 // response to dsRNA // inferred from direct assay /// 0043517 // positive regulation of DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from direct assay /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from mutant phenotype /// 0072593 // reactive oxygen species metabolic process // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0097193 // intrinsic apoptotic signaling pathway // inferred from direct assay /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement /// 1902043 // positive regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from direct assay /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -644.50 </td> <td> 410.32 </td> <td> -11.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200815_s_at </td> <td> 200815_s_at </td> <td> L13386 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L13386.1 /DEF=Homo sapiens (clone 47) Miller-Dieker lissencephaly protein (LIS1) mRNA, complete cds.  /FEA=mRNA /GEN=LIS1 /PROD=Miller-Dieker lissencephaly protein /DB_XREF=gi:349825 /UG=Hs.77318 platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit (45kD) /FL=gb:L13385.1 gb:L13386.1 gb:NM_000430.2 </td> <td> L13386 </td> <td> platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) </td> <td> PAFAH1B1 </td> <td> 5048 </td> <td> NM_000430 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000132 // establishment of mitotic spindle orientation // inferred from mutant phenotype /// 0000226 // microtubule cytoskeleton organization // inferred from sequence or structural similarity /// 0000278 // mitotic cell cycle // traceable author statement /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001675 // acrosome assembly // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from mutant phenotype /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0001961 // positive regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0008090 // retrograde axon cargo transport // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from mutant phenotype /// 0009306 // protein secretion // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0017145 // stem cell division // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from sequence or structural similarity /// 0021540 // corpus callosum morphogenesis // inferred from mutant phenotype /// 0021766 // hippocampus development // inferred from sequence or structural similarity /// 0021819 // layer formation in cerebral cortex // inferred from sequence or structural similarity /// 0021895 // cerebral cortex neuron differentiation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0032319 // regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0036035 // osteoclast development // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation /// 0046469 // platelet activating factor metabolic process // inferred from sequence or structural similarity /// 0047496 // vesicle transport along microtubule // inferred from sequence or structural similarity /// 0048854 // brain morphogenesis // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from mutant phenotype /// 0051081 // nuclear envelope disassembly // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051660 // establishment of centrosome localization // inferred from electronic annotation </td> <td> 0000235 // astral microtubule // inferred from direct assay /// 0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from sequence or structural similarity /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008201 // heparin binding // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0034452 // dynactin binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0043274 // phospholipase binding // inferred from sequence or structural similarity /// 0045502 // dynein binding // inferred from direct assay /// 0045505 // dynein intermediate chain binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from sequence or structural similarity </td> <td> -284.03 </td> <td> 322.56 </td> <td> -11.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203810_at </td> <td> 203810_at </td> <td> BG252490 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG252490 /FEA=EST /DB_XREF=gi:12762406 /DB_XREF=est:602366225F1 /CLONE=IMAGE:4474279 /UG=Hs.41693 DnaJ (Hsp40) homolog, subfamily B, member 4 /FL=gb:U40992.2 gb:NM_007034.2 </td> <td> BG252490 </td> <td> DnaJ (Hsp40) homolog, subfamily B, member 4 </td> <td> DNAJB4 </td> <td> 11080 </td> <td> NM_007034 /// XM_005270397 /// XM_006710308 </td> <td> 0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0009408 // response to heat // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> 231.67 </td> <td> 234.61 </td> <td> 11.38 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 221741_s_at </td> <td> 221741_s_at </td> <td> AL096828 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL096828 /DEF=Human DNA sequence from clone RP5-963E22 on chromosome 20 Contains the 3 end of a novel gene similar to NY-REN-2 Antigen, 5 CpG islands, ESTs, STSs and GSSs /FEA=mRNA_2 /DB_XREF=gi:9663381 /UG=Hs.11747 hypothetical protein FLJ20391 </td> <td> AL096828 </td> <td> YTH domain family, member 1 </td> <td> YTHDF1 </td> <td> 54915 </td> <td> NM_017798 </td> <td>  </td> <td>  </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 1990247 // N6-methyladenosine-containing RNA binding // inferred from direct assay </td> <td> 151.95 </td> <td> 331.40 </td> <td> 11.38 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 210357_s_at </td> <td> 210357_s_at </td> <td> BC000669 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000669.1 /DEF=Homo sapiens, Similar to hypothetical protein, clone MGC:1010, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to hypothetical protein /DB_XREF=gi:12653766 /UG=Hs.92374 hypothetical protein /FL=gb:BC000669.1 </td> <td> BC000669 </td> <td> spermine oxidase </td> <td> SMOX </td> <td> 54498 </td> <td> NM_001270691 /// NM_175839 /// NM_175840 /// NM_175841 /// NM_175842 /// XM_006723578 </td> <td> 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // traceable author statement /// 0006598 // polyamine catabolic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046208 // spermine catabolic process // inferred from direct assay /// 0046208 // spermine catabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046592 // polyamine oxidase activity // inferred from direct assay /// 0052894 // norspermine:oxygen oxidoreductase activity // inferred from electronic annotation /// 0052895 // N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity // inferred from electronic annotation /// 0052901 // spermine:oxygen oxidoreductase (spermidine-forming) activity // inferred from electronic annotation </td> <td> -133.18 </td> <td> 115.76 </td> <td> -11.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 213107_at </td> <td> 213107_at </td> <td> R59093 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:R59093 /FEA=EST /DB_XREF=gi:829788 /DB_XREF=est:yh03e12.s1 /CLONE=IMAGE:41943 /UG=Hs.170204 KIAA0551 protein /FL=gb:AF172264.1 </td> <td> R59093 </td> <td> TRAF2 and NCK interacting kinase </td> <td> TNIK </td> <td> 23043 </td> <td> NM_001161560 /// NM_001161561 /// NM_001161562 /// NM_001161563 /// NM_001161564 /// NM_001161565 /// NM_001161566 /// NM_015028 /// NR_027767 /// XM_006713555 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007256 // activation of JNKK activity // inferred from direct assay /// 0007256 // activation of JNKK activity // inferred from mutant phenotype /// 0007399 // nervous system development // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048814 // regulation of dendrite morphogenesis // inferred from direct assay /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 113.42 </td> <td> 162.71 </td> <td> 11.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 220892_s_at </td> <td> 220892_s_at </td> <td> NM_021154 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021154.1 /DEF=Homo sapiens phosphoserine aminotransferase (PSA), mRNA. /FEA=mRNA /GEN=PSA /PROD=phosphoserine aminotransferase /DB_XREF=gi:10863954 /UG=Hs.286049 phosphoserine aminotransferase /FL=gb:NM_021154.1 gb:AF113132.1 </td> <td> NM_021154 </td> <td> phosphoserine aminotransferase 1 </td> <td> PSAT1 </td> <td> 29968 </td> <td> NM_021154 /// NM_058179 </td> <td> 0006564 // L-serine biosynthetic process // non-traceable author statement /// 0006564 // L-serine biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008615 // pyridoxine biosynthetic process // non-traceable author statement /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004648 // O-phospho-L-serine:2-oxoglutarate aminotransferase activity // non-traceable author statement /// 0004648 // O-phospho-L-serine:2-oxoglutarate aminotransferase activity // traceable author statement /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation </td> <td> -508.15 </td> <td> 353.80 </td> <td> -11.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201631_s_at </td> <td> 201631_s_at </td> <td> NM_003897 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003897.1 /DEF=Homo sapiens immediate early response 3 (IER3), mRNA. /FEA=mRNA /GEN=IER3 /PROD=immediate early response 3 /DB_XREF=gi:4503328 /UG=Hs.76095 immediate early response 3 /FL=gb:BC000844.1 gb:BC005080.1 gb:AF083421.1 gb:NM_003897.1 </td> <td> NM_003897 </td> <td> immediate early response 3 </td> <td> IER3 </td> <td> 8870 </td> <td> NM_003897 /// NM_052815 </td> <td> 0000075 // cell cycle checkpoint // inferred from electronic annotation /// 0001562 // response to protozoan // inferred from electronic annotation /// 0003085 // negative regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0006282 // regulation of DNA repair // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007095 // mitotic G2 DNA damage checkpoint // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0045820 // negative regulation of glycolytic process // inferred from electronic annotation /// 0046822 // regulation of nucleocytoplasmic transport // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 1901029 // negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway // inferred from electronic annotation /// 2000377 // regulation of reactive oxygen species metabolic process // inferred from electronic annotation /// 2001020 // regulation of response to DNA damage stimulus // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -759.92 </td> <td> 1182.51 </td> <td> -11.27 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 221727_at </td> <td> 221727_at </td> <td> AA456973 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA456973 /FEA=EST /DB_XREF=gi:2179693 /DB_XREF=est:aa90g11.s1 /CLONE=IMAGE:838628 /UG=Hs.74861 activated RNA polymerase II transcription cofactor 4 </td> <td> AA456973 </td> <td> SUB1 homolog (S. cerevisiae) </td> <td> SUB1 </td> <td> 10923 </td> <td> NM_006713 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 104.28 </td> <td> 103.96 </td> <td> 11.26 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201632_at </td> <td> 201632_at </td> <td> NM_001414 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001414.1 /DEF=Homo sapiens eukaryotic translation initiation factor 2B, subunit 1 (alpha, 26kD) (EIF2B1), mRNA.  /FEA=mRNA /GEN=EIF2B1 /PROD=eukaryotic translation initiation factor 2B,subunit 1 (alpha, 26kD) /DB_XREF=gi:4503502 /UG=Hs.78592 eukaryotic translation initiation factor 2B, subunit 1 (alpha, 26kD) /FL=gb:NM_001414.1 </td> <td> NM_001414 </td> <td> eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa </td> <td> EIF2B1 </td> <td> 1967 </td> <td> NM_001414 </td> <td> 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // not recorded /// 0009408 // response to heat // inferred from sequence or structural similarity /// 0009408 // response to heat // traceable author statement /// 0009749 // response to glucose // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0014003 // oligodendrocyte development // inferred from mutant phenotype /// 0019509 // L-methionine salvage from methylthioadenosine // not recorded /// 0032057 // negative regulation of translational initiation in response to stress // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from direct assay /// 0043434 // response to peptide hormone // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051716 // cellular response to stimulus // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005851 // eukaryotic translation initiation factor 2B complex // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0003743 // translation initiation factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // not recorded </td> <td> 122.93 </td> <td> 142.19 </td> <td> 11.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200969_at </td> <td> 200969_at </td> <td> BG107676 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG107676 /FEA=EST /DB_XREF=gi:12601522 /DB_XREF=est:602277844F1 /CLONE=IMAGE:4365370 /UG=Hs.76698 stress-associated endoplasmic reticulum protein 1; ribosome associated membrane protein 4 /FL=gb:AL136807.1 gb:AF136975.1 gb:AB022427.1 gb:NM_014445.1 </td> <td> BG107676 </td> <td> uncharacterized LOC101928061 /// stress-associated endoplasmic reticulum protein 1 </td> <td> LOC101928061 /// SERP1 </td> <td> 27230 /// 101928061 </td> <td> NM_014445 /// XR_241595 /// XR_249518 /// XR_251476 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007009 // plasma membrane organization // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048644 // muscle organ morphogenesis // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005840 // ribosome // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 92.50 </td> <td> 206.32 </td> <td> 11.20 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201132_at </td> <td> 201132_at </td> <td> NM_019597 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019597.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein H2 (H) (HNRPH2), mRNA.  /FEA=mRNA /GEN=HNRPH2 /PROD=heterogeneous nuclear ribonucleoprotein H2 (H) /DB_XREF=gi:9624997 /UG=Hs.278857 heterogeneous nuclear ribonucleoprotein H2 (H) /FL=gb:NM_019597.1 </td> <td> NM_019597 </td> <td> heterogeneous nuclear ribonucleoprotein H2 (H') /// RPL36A-HNRNPH2 readthrough </td> <td> HNRNPH2 /// RPL36A-HNRNPH2 </td> <td> 3188 /// 100529097 </td> <td> NM_001032393 /// NM_001199973 /// NM_001199974 /// NM_019597 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0005840 // ribosome // non-traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 114.00 </td> <td> 175.03 </td> <td> 11.19 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 211985_s_at </td> <td> 211985_s_at </td> <td> AI653730 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI653730 /FEA=EST /DB_XREF=gi:4737709 /DB_XREF=est:wb36f12.x1 /CLONE=IMAGE:2307791 /UG=Hs.279009 matrix Gla protein </td> <td> AI653730 </td> <td> calmodulin 1 (phosphorylase kinase, delta) /// calmodulin 2 (phosphorylase kinase, delta) /// calmodulin 3 (phosphorylase kinase, delta) </td> <td> CALM1 /// CALM2 /// CALM3 </td> <td> 801 /// 805 /// 808 </td> <td> NM_001166106 /// NM_001743 /// NM_005184 /// NM_006888 /// XM_006720258 </td> <td> 0001975 // response to amphetamine // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0005513 // detection of calcium ion // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007190 // activation of adenylate cyclase activity // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // inferred from direct assay /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred by curator /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030801 // positive regulation of cyclic nucleotide metabolic process // inferred from direct assay /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0051343 // positive regulation of cyclic-nucleotide phosphodiesterase activity // inferred from direct assay /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay /// 0055117 // regulation of cardiac muscle contraction // inferred from mutant phenotype /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from electronic annotation /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060316 // positive regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0061024 // membrane organization // traceable author statement /// 1901841 // regulation of high voltage-gated calcium channel activity // inferred from electronic annotation /// 1901844 // regulation of cell communication by electrical coupling involved in cardiac conduction // inferred by curator </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0030017 // sarcomere // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008179 // adenylate cyclase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0030235 // nitric-oxide synthase regulator activity // inferred from electronic annotation /// 0031432 // titin binding // inferred from physical interaction /// 0031800 // type 3 metabotropic glutamate receptor binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction /// 0031997 // N-terminal myristoylation domain binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation /// 0050998 // nitric-oxide synthase binding // inferred from electronic annotation /// 0072542 // protein phosphatase activator activity // inferred from direct assay </td> <td> 247.08 </td> <td> 531.66 </td> <td> 11.18 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 205264_at </td> <td> 205264_at </td> <td> NM_012099 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012099.1 /DEF=Homo sapiens CD3-epsilon-associated protein; antisense to ERCC-1 (ASE-1), mRNA.  /FEA=mRNA /GEN=ASE-1 /PROD=CD3-epsilon-associated protein; antisense toERCC-1 /DB_XREF=gi:6912245 /UG=Hs.211956 CD3-epsilon-associated protein; antisense to ERCC-1 /FL=gb:U86751.1 gb:AF017633.1 gb:NM_012099.1 </td> <td> NM_012099 </td> <td> CD3e molecule, epsilon associated protein </td> <td> CD3EAP </td> <td> 10849 </td> <td> NM_012099 /// XM_005258425 </td> <td> 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0009303 // rRNA transcription // inferred from electronic annotation </td> <td> 0000120 // RNA polymerase I transcription factor complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005736 // DNA-directed RNA polymerase I complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 115.65 </td> <td> 120.35 </td> <td> 11.12 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 217168_s_at </td> <td> 217168_s_at </td> <td> AF217990 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF217990.1 /DEF=Homo sapiens clone PP1722 unknown mRNA. /FEA=mRNA /PROD=unknown /DB_XREF=gi:10441910 /UG=Hs.146393 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 </td> <td> AF217990 </td> <td> homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 </td> <td> HERPUD1 </td> <td> 9709 </td> <td> NM_001010989 /// NM_001010990 /// NM_001272103 /// NM_014685 /// XM_006721352 </td> <td> 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from expression pattern /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031396 // regulation of protein ubiquitination // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -588.73 </td> <td> 700.11 </td> <td> -11.11 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 221751_at </td> <td> 221751_at </td> <td> AL565516 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL565516 /FEA=EST /DB_XREF=gi:12916970 /DB_XREF=est:AL565516 /CLONE=CS0DF004YF08 (3 prime) /UG=Hs.6986 Human glucose transporter pseudogene </td> <td> AL565516 </td> <td> pantothenate kinase 3 </td> <td> PANK3 </td> <td> 79646 </td> <td> NM_024594 </td> <td> 0015937 // coenzyme A biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004594 // pantothenate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 205.00 </td> <td> 193.95 </td> <td> 11.11 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 214683_s_at </td> <td> 214683_s_at </td> <td> AI251890 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI251890 /FEA=EST /DB_XREF=gi:3848419 /DB_XREF=est:qu78d12.x1 /CLONE=IMAGE:1978199 /UG=Hs.2083 CDC-like kinase1 </td> <td> AI251890 </td> <td> CDC-like kinase 1 </td> <td> CLK1 </td> <td> 1195 </td> <td> NM_001024646 /// NM_001162407 /// NM_004071 /// NR_027855 /// NR_027856 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -114.62 </td> <td> 105.21 </td> <td> -11.02 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 213009_s_at </td> <td> 213009_s_at </td> <td> AK022701 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK022701.1 /DEF=Homo sapiens cDNA FLJ12639 fis, clone NT2RM4001938, highly similar to Homo sapiens mRNA for KIAA0898 protein.  /FEA=mRNA /DB_XREF=gi:10434250 /UG=Hs.8164 Mulibrey nanism </td> <td> AK022701 </td> <td> tripartite motif containing 37 </td> <td> TRIM37 </td> <td> 4591 </td> <td> NM_001005207 /// NM_015294 /// XM_005257385 /// XM_005257386 /// XM_005257387 /// XM_005257388 /// XM_005257389 /// XM_005257390 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0046600 // negative regulation of centriole replication // inferred from mutant phenotype /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0070842 // aggresome assembly // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005777 // peroxisome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005164 // tumor necrosis factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -246.35 </td> <td> 397.70 </td> <td> -11.02 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200803_s_at </td> <td> 200803_s_at </td> <td> AF033095 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF033095.1 /DEF=Homo sapiens testis enhanced gene transcript protein (TEGT) mRNA, complete cds.  /FEA=mRNA /GEN=TEGT /PROD=testis enhanced gene transcript protein /DB_XREF=gi:2645728 /UG=Hs.74637 testis enhanced gene transcript (BAX inhibitor 1) /FL=gb:BC000916.1 gb:AF033095.1 gb:NM_003217.1 </td> <td> AF033095 </td> <td> transmembrane BAX inhibitor motif containing 6 </td> <td> TMBIM6 </td> <td> 7009 </td> <td> NM_001098576 /// NM_003217 /// XM_005269126 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0032469 // endoplasmic reticulum calcium ion homeostasis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -363.07 </td> <td> 961.41 </td> <td> -11.00 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212928_at </td> <td> 212928_at </td> <td> AL050331 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL050331 /DEF=Human DNA sequence from clone 486I3 on chromosome 6q22.1-22.3. Contains the part of a gene for a novel protein, the gene for KIAA0721 (NAP (Nucleosome Assembly Protein) domain containg protein), the TSPYL gene for TSPY-like (testis specific protei... /FEA=mRNA_1 /DB_XREF=gi:5668655 /UG=Hs.284141 KIAA0721 protein /FL=gb:NM_021648.1 </td> <td> AL050331 </td> <td> TSPY-like 4 </td> <td> TSPYL4 </td> <td> 23270 </td> <td> NM_021648 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td>  </td> <td> 195.30 </td> <td> 169.75 </td> <td> 10.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 214447_at </td> <td> 214447_at </td> <td> NM_005238 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_005238.1 /DEF=Homo sapiens v-ets avian erythroblastosis virus E26 oncogene homolog 1 (ETS1), mRNA.  /FEA=CDS /GEN=ETS1 /PROD=v-ets avian erythroblastosis virus E26 oncogenehomolog 1 /DB_XREF=gi:4885218 /UG=Hs.248109 v-ets avian erythroblastosis virus E26 oncogene homolog 1 /FL=gb:J04101.1 gb:NM_005238.1 </td> <td> NM_005238 </td> <td> v-ets avian erythroblastosis virus E26 oncogene homolog 1 </td> <td> ETS1 </td> <td> 2113 </td> <td> NM_001143820 /// NM_001162422 /// NM_005238 /// XM_005271428 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006955 // immune response // traceable author statement /// 0007565 // female pregnancy // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009611 // response to wounding // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010715 // regulation of extracellular matrix disassembly // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030262 // apoptotic nuclear changes // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030578 // PML body organization // inferred from direct assay /// 0032355 // response to estradiol // inferred from electronic annotation /// 0034616 // response to laminar fluid shear stress // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0045648 // positive regulation of erythrocyte differentiation // inferred from direct assay /// 0045765 // regulation of angiogenesis // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046677 // response to antibiotic // inferred from direct assay /// 0048870 // cell motility // inferred from mutant phenotype /// 0051272 // positive regulation of cellular component movement // inferred from mutant phenotype /// 0060055 // angiogenesis involved in wound healing // inferred from electronic annotation /// 0060206 // estrous cycle phase // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation /// 0097194 // execution phase of apoptosis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0045171 // intercellular bridge // inferred from direct assay </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // non-traceable author statement /// 0035035 // histone acetyltransferase binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -152.85 </td> <td> 136.35 </td> <td> -10.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 204131_s_at </td> <td> 204131_s_at </td> <td> N25732 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N25732 /FEA=EST /DB_XREF=gi:1140080 /DB_XREF=est:yx83c03.s1 /CLONE=IMAGE:268324 /UG=Hs.14845 forkhead box O3A /FL=gb:AF032886.1 gb:NM_001455.1 </td> <td> N25732 </td> <td> forkhead box O3 </td> <td> FOXO3 </td> <td> 2309 </td> <td> NM_001455 /// NM_201559 /// XM_005266867 /// XM_005266868 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001544 // initiation of primordial ovarian follicle growth // inferred from electronic annotation /// 0001547 // antral ovarian follicle growth // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006417 // regulation of translation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // not recorded /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007389 // pattern specification process // not recorded /// 0008286 // insulin receptor signaling pathway // not recorded /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009790 // embryo development //  /// 0009888 // tissue development // not recorded /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from sequence or structural similarity /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // not recorded /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045648 // positive regulation of erythrocyte differentiation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // not recorded /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0001047 // core promoter binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008301 // DNA binding, bending // not recorded /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031490 // chromatin DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from direct assay </td> <td> -108.92 </td> <td> 91.29 </td> <td> -10.97 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201736_s_at </td> <td> 201736_s_at </td> <td> BF000409 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF000409 /FEA=EST /DB_XREF=gi:10700684 /DB_XREF=est:7h27h07.x1 /CLONE=IMAGE:3317245 /UG=Hs.20141 similar to S. cerevisiae SSM4 /FL=gb:AF009301.1 gb:NM_005885.1 </td> <td> BF000409 </td> <td> membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase </td> <td> MARCH6 </td> <td> 10299 </td> <td> NM_001270660 /// NM_001270661 /// NM_005885 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0031624 // ubiquitin conjugating enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -178.43 </td> <td> 333.31 </td> <td> -10.96 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200033_at </td> <td> 200033_at </td> <td> NM_004396 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004396.2 /DEF=Homo sapiens DEADH (Asp-Glu-Ala-AspHis) box polypeptide 5 (RNA helicase, 68kD) (DDX5), mRNA.  /FEA=mRNA /GEN=DDX5 /PROD=DEADH (Asp-Glu-Ala-AspHis) box polypeptide 5 /DB_XREF=gi:13514826 /UG=Hs.76053 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 5 (RNA helicase, 68kD) /FL=gb:NM_004396.2 </td> <td> NM_004396 </td> <td> DEAD (Asp-Glu-Ala-Asp) box helicase 5 /// microRNA 3064 /// microRNA 5047 </td> <td> DDX5 /// MIR3064 /// MIR5047 </td> <td> 1655 /// 100616387 /// 100616408 </td> <td> NM_004396 /// NR_039891 /// NR_039969 /// XM_005257111 /// XM_006721738 /// XR_429871 /// XR_429872 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016049 // cell growth // non-traceable author statement /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0043517 // positive regulation of DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // inferred from electronic annotation /// 0045667 // regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation /// 0060765 // regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from mutant phenotype /// 2001014 // regulation of skeletal muscle cell differentiation // inferred from sequence or structural similarity /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // inferred from mutant phenotype /// 0003724 // RNA helicase activity // non-traceable author statement /// 0004004 // ATP-dependent RNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0036002 // pre-mRNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from direct assay </td> <td> 547.55 </td> <td> 1063.03 </td> <td> 10.93 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203583_at </td> <td> 203583_at </td> <td> NM_014044 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014044.1 /DEF=Homo sapiens DKFZP564G0222 protein (DKFZP564G0222), mRNA. /FEA=mRNA /GEN=DKFZP564G0222 /PROD=DKFZP564G0222 protein /DB_XREF=gi:7661609 /UG=Hs.13370 DKFZP564G0222 protein /FL=gb:AF077038.1 gb:AL080115.1 gb:NM_014044.1 </td> <td> NM_014044 </td> <td> unc-50 homolog (C. elegans) </td> <td> UNC50 </td> <td> 25972 </td> <td> NM_014044 /// XM_005263913 /// XM_006712403 /// XM_006712404 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation </td> <td> 110.80 </td> <td> 172.15 </td> <td> 10.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212977_at </td> <td> 212977_at </td> <td> AI817041 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI817041 /FEA=EST /DB_XREF=gi:5436120 /DB_XREF=est:wj76c06.x1 /CLONE=IMAGE:2408746 /UG=Hs.23016 G protein-coupled receptor </td> <td> AI817041 </td> <td> atypical chemokine receptor 3 </td> <td> ACKR3 </td> <td> 57007 </td> <td> NM_001047841 /// NM_020311 /// XM_005246097 /// XM_005246098 /// XM_006712640 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0070098 // chemokine-mediated signaling pathway // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 1902230 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004950 // chemokine receptor activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // inferred from electronic annotation /// 0016494 // C-X-C chemokine receptor activity // inferred from mutant phenotype /// 0019958 // C-X-C chemokine binding // inferred from mutant phenotype </td> <td> -930.20 </td> <td> 608.23 </td> <td> -10.89 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212455_at </td> <td> 212455_at </td> <td> N36997 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N36997 /FEA=EST /DB_XREF=gi:1158139 /DB_XREF=est:yy39g07.s1 /CLONE=IMAGE:273660 /UG=Hs.12797 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 16 </td> <td> N36997 </td> <td> YTH domain containing 1 </td> <td> YTHDC1 </td> <td> 91746 </td> <td> NM_001031732 /// NM_133370 /// XM_005265706 /// XM_005265707 /// XM_005265708 /// XM_005275637 /// XM_005275638 /// XM_005275639 </td> <td> 0006376 // mRNA splice site selection // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -338.80 </td> <td> 598.55 </td> <td> -10.87 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200650_s_at </td> <td> 200650_s_at </td> <td> NM_005566 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005566.1 /DEF=Homo sapiens lactate dehydrogenase A (LDHA), mRNA. /FEA=mRNA /GEN=LDHA /PROD=LDHA /DB_XREF=gi:5031856 /UG=Hs.2795 lactate dehydrogenase A /FL=gb:BC001829.1 gb:NM_005566.1 </td> <td> NM_005566 </td> <td> lactate dehydrogenase A </td> <td> LDHA </td> <td> 3939 </td> <td> NM_001135239 /// NM_001165414 /// NM_001165415 /// NM_001165416 /// NM_005566 /// NR_028500 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006096 // glycolytic process // non-traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044262 // cellular carbohydrate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004459 // L-lactate dehydrogenase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation </td> <td> -1196.57 </td> <td> 2534.89 </td> <td> -10.81 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 204748_at </td> <td> 204748_at </td> <td> NM_000963 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000963.1 /DEF=Homo sapiens prostaglandin-endoperoxide synthase 2 (prostaglandin GH synthase and cyclooxygenase) (PTGS2), mRNA.  /FEA=mRNA /GEN=PTGS2 /PROD=prostaglandin-endoperoxide synthase 2(prostaglandin GH synthase and cyclooxygenase) /DB_XREF=gi:4506264 /UG=Hs.196384 prostaglandin-endoperoxide synthase 2 (prostaglandin GH synthase and cyclooxygenase) /FL=gb:M90100.1 gb:L15326.1 gb:NM_000963.1 </td> <td> NM_000963 </td> <td> prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) </td> <td> PTGS2 </td> <td> 5743 </td> <td> NM_000963 </td> <td> 0001516 // prostaglandin biosynthetic process // inferred from sequence or structural similarity /// 0001516 // prostaglandin biosynthetic process // non-traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006693 // prostaglandin metabolic process // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0009750 // response to fructose // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010042 // response to manganese ion // inferred from electronic annotation /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019369 // arachidonic acid metabolic process // traceable author statement /// 0019371 // cyclooxygenase pathway // inferred from direct assay /// 0019371 // cyclooxygenase pathway // traceable author statement /// 0019372 // lipoxygenase pathway // traceable author statement /// 0030282 // bone mineralization // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation /// 0031394 // positive regulation of prostaglandin biosynthetic process // non-traceable author statement /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0031915 // positive regulation of synaptic plasticity // inferred from electronic annotation /// 0032227 // negative regulation of synaptic transmission, dopaminergic // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0034612 // response to tumor necrosis factor // inferred from electronic annotation /// 0034644 // cellular response to UV // inferred from electronic annotation /// 0035633 // maintenance of blood-brain barrier // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042633 // hair cycle // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045786 // negative regulation of cell cycle // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0045986 // negative regulation of smooth muscle contraction // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // non-traceable author statement /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070542 // response to fatty acid // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071318 // cellular response to ATP // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071636 // positive regulation of transforming growth factor beta production // inferred from sequence or structural similarity /// 0090050 // positive regulation of cell migration involved in sprouting angiogenesis // inferred from sequence or structural similarity /// 0090271 // positive regulation of fibroblast growth factor production // inferred from sequence or structural similarity /// 0090336 // positive regulation of brown fat cell differentiation // inferred from sequence or structural similarity /// 0090362 // positive regulation of platelet-derived growth factor production // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0004601 // peroxidase activity // non-traceable author statement /// 0004666 // prostaglandin-endoperoxide synthase activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050473 // arachidonate 15-lipoxygenase activity // traceable author statement /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -987.77 </td> <td> 584.24 </td> <td> -10.76 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202658_at </td> <td> 202658_at </td> <td> NM_003846 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003846.1 /DEF=Homo sapiens peroxisomal biogenesis factor 11B (PEX11B), mRNA. /FEA=mRNA /GEN=PEX11B /PROD=peroxisomal biogenesis factor 11B /DB_XREF=gi:4505718 /UG=Hs.83023 peroxisomal biogenesis factor 11B /FL=gb:AF093670.1 gb:AB018080.1 gb:NM_003846.1 </td> <td> NM_003846 </td> <td> peroxisomal biogenesis factor 11 beta </td> <td> PEX11B </td> <td> 8799 </td> <td> NM_001184795 /// NM_003846 /// NR_073491 /// NR_073492 /// NR_073493 </td> <td> 0007031 // peroxisome organization // inferred from direct assay /// 0007031 // peroxisome organization // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from sequence or structural similarity /// 0016559 // peroxisome fission // inferred from direct assay /// 0044375 // regulation of peroxisome size // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005779 // integral component of peroxisomal membrane // inferred from direct assay /// 0005779 // integral component of peroxisomal membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> 136.65 </td> <td> 126.23 </td> <td> 10.75 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202369_s_at </td> <td> 202369_s_at </td> <td> NM_012288 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012288.1 /DEF=Homo sapiens TRAM-like protein (KIAA0057), mRNA. /FEA=mRNA /GEN=KIAA0057 /PROD=TRAM-like protein /DB_XREF=gi:6912449 /UG=Hs.153954 TRAM-like protein /FL=gb:D31762.1 gb:NM_012288.1 </td> <td> NM_012288 </td> <td> translocation associated membrane protein 2 </td> <td> TRAM2 </td> <td> 9697 </td> <td> NM_012288 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0032964 // collagen biosynthetic process // inferred from mutant phenotype </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 376.92 </td> <td> 428.66 </td> <td> 10.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212218_s_at </td> <td> 212218_s_at </td> <td> AI954041 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI954041 /FEA=EST /DB_XREF=gi:5746351 /DB_XREF=est:wx78h04.x1 /CLONE=IMAGE:2549815 /UG=Hs.11050 F-box only protein 9 /FL=gb:NM_012347.1 </td> <td> AI954041 </td> <td> fatty acid synthase </td> <td> FASN </td> <td> 2194 </td> <td> NM_004104 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006084 // acetyl-CoA metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0015939 // pantothenate metabolic process // traceable author statement /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0031325 // positive regulation of cellular metabolic process // traceable author statement /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0042587 // glycogen granule // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004312 // fatty acid synthase activity // traceable author statement /// 0004313 // [acyl-carrier-protein] S-acetyltransferase activity // inferred from electronic annotation /// 0004314 // [acyl-carrier-protein] S-malonyltransferase activity // inferred from electronic annotation /// 0004315 // 3-oxoacyl-[acyl-carrier-protein] synthase activity // inferred from electronic annotation /// 0004316 // 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity // inferred from electronic annotation /// 0004317 // 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity // inferred from electronic annotation /// 0004319 // enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity // inferred from electronic annotation /// 0004320 // oleoyl-[acyl-carrier-protein] hydrolase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016295 // myristoyl-[acyl-carrier-protein] hydrolase activity // inferred from electronic annotation /// 0016296 // palmitoyl-[acyl-carrier-protein] hydrolase activity // inferred from electronic annotation /// 0016297 // acyl-[acyl-carrier-protein] hydrolase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0019171 // 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity // inferred from electronic annotation /// 0031177 // phosphopantetheine binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047117 // enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity // inferred from electronic annotation /// 0047451 // 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation </td> <td> 185.77 </td> <td> 193.66 </td> <td> 10.69 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203665_at </td> <td> 203665_at </td> <td> NM_002133 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002133.1 /DEF=Homo sapiens heme oxygenase (decycling) 1 (HMOX1), mRNA. /FEA=mRNA /GEN=HMOX1 /PROD=heme oxygenase (decyclizing) 1 /DB_XREF=gi:4504436 /UG=Hs.202833 heme oxygenase (decycling) 1 /FL=gb:NM_002133.1 </td> <td> NM_002133 </td> <td> heme oxygenase (decycling) 1 </td> <td> HMOX1 </td> <td> 3162 </td> <td> NM_002133 </td> <td> 0001525 // angiogenesis // traceable author statement /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001935 // endothelial cell proliferation // traceable author statement /// 0002246 // wound healing involved in inflammatory response // inferred from mutant phenotype /// 0002686 // negative regulation of leukocyte migration // traceable author statement /// 0006778 // porphyrin-containing compound metabolic process // traceable author statement /// 0006788 // heme oxidation // inferred from direct assay /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007588 // excretion // inferred by curator /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008219 // cell death // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0010656 // negative regulation of muscle cell apoptotic process // inferred from electronic annotation /// 0014806 // smooth muscle hyperplasia // traceable author statement /// 0031670 // cellular response to nutrient // inferred from electronic annotation /// 0032764 // negative regulation of mast cell cytokine production // inferred from electronic annotation /// 0034101 // erythrocyte homeostasis // inferred from mutant phenotype /// 0034383 // low-density lipoprotein particle clearance // traceable author statement /// 0035094 // response to nicotine // inferred from direct assay /// 0035556 // intracellular signal transduction // traceable author statement /// 0042167 // heme catabolic process // inferred from direct assay /// 0042167 // heme catabolic process // traceable author statement /// 0042168 // heme metabolic process // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from sequence or structural similarity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043305 // negative regulation of mast cell degranulation // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043619 // regulation of transcription from RNA polymerase II promoter in response to oxidative stress // inferred from sequence or structural similarity /// 0043627 // response to estrogen // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045080 // positive regulation of chemokine biosynthetic process // traceable author statement /// 0045765 // regulation of angiogenesis // traceable author statement /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045909 // positive regulation of vasodilation // inferred by curator /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050896 // response to stimulus // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from direct assay /// 0055072 // iron ion homeostasis // inferred from direct assay /// 0055072 // iron ion homeostasis // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071243 // cellular response to arsenic-containing substance // inferred from electronic annotation /// 0071276 // cellular response to cadmium ion // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype </td> <td> 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004392 // heme oxygenase (decyclizing) activity // inferred from direct assay /// 0004392 // heme oxygenase (decyclizing) activity // inferred from mutant phenotype /// 0004630 // phospholipase D activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -1604.22 </td> <td> 911.29 </td> <td> -10.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 38340_at </td> <td> 38340_at </td> <td> AB014555 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AB014555:Homo sapiens mRNA for KIAA0655 protein, partial cds /cds=(0,3253) /gb=AB014555 /gi=3327123 /ug=Hs.96731 /len=4457 </td> <td> AB014555 </td> <td> huntingtin interacting protein 1 related </td> <td> HIP1R </td> <td> 9026 </td> <td> NM_003959 /// XM_005253627 /// XM_005253628 /// XM_006719683 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay </td> <td> 141.30 </td> <td> 280.23 </td> <td> 10.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202402_s_at </td> <td> 202402_s_at </td> <td> NM_001751 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001751.1 /DEF=Homo sapiens cysteinyl-tRNA synthetase (CARS), mRNA. /FEA=mRNA /GEN=CARS /PROD=cysteinyl-tRNA synthetase /DB_XREF=gi:10835050 /UG=Hs.159604 cysteinyl-tRNA synthetase /FL=gb:NM_001751.1 gb:BC002880.1 gb:AF288206.1 gb:AF288207.1 </td> <td> NM_001751 </td> <td> cysteinyl-tRNA synthetase </td> <td> CARS </td> <td> 833 </td> <td> NM_001014437 /// NM_001014438 /// NM_001194997 /// NM_001751 /// NM_139273 /// NR_036542 /// XM_006718340 /// XM_006718341 /// XM_006725129 /// XM_006725130 /// XR_428857 /// XR_430701 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006423 // cysteinyl-tRNA aminoacylation // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement </td> <td> 0000049 // tRNA binding // inferred from direct assay /// 0000049 // tRNA binding // inferred from mutant phenotype /// 0000049 // tRNA binding // non-traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004817 // cysteine-tRNA ligase activity // inferred from direct assay /// 0004817 // cysteine-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -131.90 </td> <td> 132.88 </td> <td> -10.65 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218943_s_at </td> <td> 218943_s_at </td> <td> NM_014314 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014314.1 /DEF=Homo sapiens RNA helicase (RIG-I), mRNA. /FEA=mRNA /GEN=RIG-I /PROD=RNA helicase /DB_XREF=gi:7657515 /UG=Hs.145612 RNA helicase /FL=gb:AF038963.1 gb:NM_014314.1 </td> <td> NM_014314 </td> <td> DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 </td> <td> DDX58 </td> <td> 23586 </td> <td> NM_014314 </td> <td> 0002230 // positive regulation of defense response to virus by host // inferred from mutant phenotype /// 0002376 // immune system process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009597 // detection of virus // inferred from direct assay /// 0009615 // response to virus // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from direct assay /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032727 // positive regulation of interferon-alpha production // inferred from mutant phenotype /// 0032728 // positive regulation of interferon-beta production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from mutant phenotype /// 0034344 // regulation of type III interferon production // traceable author statement /// 0039528 // cytoplasmic pattern recognition receptor signaling pathway in response to virus // traceable author statement /// 0039529 // RIG-I signaling pathway // inferred from mutant phenotype /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from direct assay /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0045087 // innate immune response // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred by curator /// 0051607 // defense response to virus // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from mutant phenotype /// 0003725 // double-stranded RNA binding // traceable author statement /// 0003727 // single-stranded RNA binding // inferred from mutant phenotype /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -93.68 </td> <td> 79.56 </td> <td> -10.65 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209658_at </td> <td> 209658_at </td> <td> AF164598 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF164598.1 /DEF=Homo sapiens cell division control protein 16 (CDC16) mRNA, complete cds.  /FEA=mRNA /GEN=CDC16 /PROD=cell division control protein 16 /DB_XREF=gi:5533374 /UG=Hs.1592 CDC16 (cell division cycle 16, S. cerevisiae, homolog) /FL=gb:AF164598.1 </td> <td> AF164598 </td> <td> cell division cycle 16 </td> <td> CDC16 </td> <td> 8881 </td> <td> NM_001078645 /// NM_003903 /// XM_005266204 /// XM_005266206 /// XM_006719992 /// XM_006719993 /// XR_245358 /// XR_245359 /// XR_245360 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007088 // regulation of mitosis // traceable author statement /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 126.03 </td> <td> 128.29 </td> <td> 10.64 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201263_at </td> <td> 201263_at </td> <td> NM_003191 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003191.1 /DEF=Homo sapiens threonyl-tRNA synthetase (TARS), mRNA. /FEA=mRNA /GEN=TARS /PROD=threonyl-tRNA synthetase /DB_XREF=gi:4507366 /UG=Hs.84131 threonyl-tRNA synthetase /FL=gb:BC000517.1 gb:M63180.1 gb:NM_003191.1 </td> <td> NM_003191 </td> <td> threonyl-tRNA synthetase </td> <td> TARS </td> <td> 6897 </td> <td> NM_001258437 /// NM_001258438 /// NM_152295 /// NR_047676 /// NR_047677 /// NR_047678 </td> <td> 0006412 // translation // non-traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006435 // threonyl-tRNA aminoacylation // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0043039 // tRNA aminoacylation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004829 // threonine-tRNA ligase activity // non-traceable author statement /// 0004829 // threonine-tRNA ligase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds // inferred from electronic annotation /// 0042803 // protein homodimerization activity // non-traceable author statement </td> <td> -290.05 </td> <td> 434.62 </td> <td> -10.62 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209723_at </td> <td> 209723_at </td> <td> BC002538 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002538.1 /DEF=Homo sapiens, serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 9, clone MGC:2131, mRNA, complete cds.  /FEA=mRNA /PROD=serine (or cysteine) proteinase inhibitor, cladeB (ovalbumin), member 9 /DB_XREF=gi:12803428 /UG=Hs.104879 serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 9 /FL=gb:L40378.1 gb:BC002538.1 gb:U71364.1 gb:NM_004155.1 </td> <td> BC002538 </td> <td> serpin peptidase inhibitor, clade B (ovalbumin), member 9 </td> <td> SERPINB9 </td> <td> 5272 </td> <td> NM_004155 /// XM_005249184 </td> <td> 0002448 // mast cell mediated immunity // inferred from expression pattern /// 0006955 // immune response // inferred from direct assay /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030162 // regulation of proteolysis // not recorded /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0071391 // cellular response to estrogen stimulus // inferred from expression pattern </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from mutant phenotype </td> <td> 247.23 </td> <td> 471.34 </td> <td> 10.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212286_at </td> <td> 212286_at </td> <td> AW572909 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW572909 /FEA=EST /DB_XREF=gi:7237642 /DB_XREF=est:hf17d03.x1 /CLONE=IMAGE:2932133 /UG=Hs.27973 KIAA0874 protein /FL=gb:AF317425.1 </td> <td> AW572909 </td> <td> ankyrin repeat domain 12 </td> <td> ANKRD12 </td> <td> 23253 </td> <td> NM_001083625 /// NM_001204056 /// NM_015208 /// XM_005258092 /// XM_005258093 /// XM_005258094 /// XM_005258095 /// XM_005258096 /// XM_006722317 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -163.02 </td> <td> 126.19 </td> <td> -10.58 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 216268_s_at </td> <td> 216268_s_at </td> <td> U77914 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U77914.1 /DEF=Human soluble protein Jagged mRNA, partial cds. /FEA=mRNA /PROD=soluble protein Jagged /DB_XREF=gi:1684889 /UG=Hs.91143 jagged 1 (Alagille syndrome) </td> <td> U77914 </td> <td> jagged 1 </td> <td> JAG1 </td> <td> 182 </td> <td> NM_000214 </td> <td> 0001525 // angiogenesis // non-traceable author statement /// 0001709 // cell fate determination // non-traceable author statement /// 0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0002456 // T cell mediated immunity // inferred from mutant phenotype /// 0003184 // pulmonary valve morphogenesis // inferred from mutant phenotype /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0007154 // cell communication // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0030097 // hemopoiesis // non-traceable author statement /// 0030216 // keratinocyte differentiation // non-traceable author statement /// 0030334 // regulation of cell migration // non-traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0035909 // aorta morphogenesis // inferred from sequence or structural similarity /// 0042127 // regulation of cell proliferation // non-traceable author statement /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0045445 // myoblast differentiation // non-traceable author statement /// 0045446 // endothelial cell differentiation // non-traceable author statement /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045639 // positive regulation of myeloid cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048839 // inner ear development // inferred from electronic annotation /// 0060411 // cardiac septum morphogenesis // inferred from sequence or structural similarity /// 0061156 // pulmonary artery morphogenesis // inferred from mutant phenotype /// 0061309 // cardiac neural crest cell development involved in outflow tract morphogenesis // inferred from sequence or structural similarity /// 0061314 // Notch signaling involved in heart development // inferred by curator /// 0061314 // Notch signaling involved in heart development // inferred from mutant phenotype /// 0061444 // endocardial cushion cell development // inferred from sequence or structural similarity /// 0072017 // distal tubule development // inferred from electronic annotation /// 0072070 // loop of Henle development // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation </td> <td> 0005112 // Notch binding // non-traceable author statement /// 0005198 // structural molecule activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // non-traceable author statement </td> <td> -754.02 </td> <td> 580.84 </td> <td> -10.56 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201475_x_at </td> <td> 201475_x_at </td> <td> NM_004990 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004990.1 /DEF=Homo sapiens methionine-tRNA synthetase (MARS), mRNA. /FEA=mRNA /GEN=MARS /PROD=methionine-tRNA synthetase /DB_XREF=gi:4826825 /UG=Hs.279946 methionine-tRNA synthetase /FL=gb:BC002384.1 gb:NM_004990.1 gb:D84224.1 </td> <td> NM_004990 </td> <td> methionyl-tRNA synthetase /// microRNA 6758 </td> <td> MARS /// MIR6758 </td> <td> 4141 /// 102465454 </td> <td> NM_004990 /// NR_106816 /// XM_006719398 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006431 // methionyl-tRNA aminoacylation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004825 // methionine-tRNA ligase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -516.93 </td> <td> 553.74 </td> <td> -10.54 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201866_s_at </td> <td> 201866_s_at </td> <td> NM_000176 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000176.1 /DEF=Homo sapiens nuclear receptor subfamily 3, group C, member 1 (NR3C1), mRNA.  /FEA=mRNA /GEN=NR3C1 /PROD=nuclear receptor subfamily 3, group C, member 1 /DB_XREF=gi:4504132 /UG=Hs.75772 nuclear receptor subfamily 3, group C, member 1 /FL=gb:M10901.1 gb:NM_000176.1 </td> <td> NM_000176 </td> <td> nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) </td> <td> NR3C1 </td> <td> 2908 </td> <td> NM_000176 /// NM_001018074 /// NM_001018075 /// NM_001018076 /// NM_001018077 /// NM_001020825 /// NM_001024094 /// NM_001204258 /// NM_001204259 /// NM_001204260 /// NM_001204261 /// NM_001204262 /// NM_001204263 /// NM_001204264 /// NM_001204265 /// XM_005268419 /// XM_005268420 /// XM_005268421 /// XM_005268422 /// XM_005268423 </td> <td> 0006111 // regulation of gluconeogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008211 // glucocorticoid metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0031946 // regulation of glucocorticoid biosynthetic process // inferred from electronic annotation /// 0042921 // glucocorticoid receptor signaling pathway // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043402 // glucocorticoid mediated signaling pathway // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004883 // glucocorticoid receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -152.07 </td> <td> 137.84 </td> <td> -10.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200802_at </td> <td> 200802_at </td> <td> NM_006513 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006513.1 /DEF=Homo sapiens seryl-tRNA synthetase (SARS), mRNA. /FEA=mRNA /GEN=SARS /PROD=seryl-tRNA synthetase /DB_XREF=gi:5730028 /UG=Hs.4888 seryl-tRNA synthetase /FL=gb:BC000716.1 gb:NM_006513.1 gb:D49914.1 </td> <td> NM_006513 </td> <td> seryl-tRNA synthetase </td> <td> SARS </td> <td> 6301 </td> <td> NM_006513 /// NR_034072 /// NR_034073 /// XM_006710813 </td> <td> 0006412 // translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006434 // seryl-tRNA aminoacylation // inferred from electronic annotation /// 0008033 // tRNA processing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0097056 // selenocysteinyl-tRNA(Sec) biosynthetic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004828 // serine-tRNA ligase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -533.75 </td> <td> 745.42 </td> <td> -10.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 205436_s_at </td> <td> 205436_s_at </td> <td> NM_002105 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002105.1 /DEF=Homo sapiens H2A histone family, member X (H2AFX), mRNA. /FEA=mRNA /GEN=H2AFX /PROD=H2A histone family, member X /DB_XREF=gi:4504252 /UG=Hs.147097 H2A histone family, member X /FL=gb:BC004915.1 gb:NM_002105.1 </td> <td> NM_002105 </td> <td> H2A histone family, member X </td> <td> H2AFX </td> <td> 3014 </td> <td> NM_002105 </td> <td> 0000077 // DNA damage checkpoint // inferred from direct assay /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006302 // double-strand break repair // non-traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0010212 // response to ionizing radiation // non-traceable author statement /// 0045739 // positive regulation of DNA repair // non-traceable author statement </td> <td> 0000781 // chromosome, telomeric region // inferred from direct assay /// 0000785 // chromatin // inferred from electronic annotation /// 0000786 // nucleosome // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0001673 // male germ cell nucleus // inferred from electronic annotation /// 0001741 // XY body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0035861 // site of double-strand break // inferred from direct assay </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0042393 // histone binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 321.07 </td> <td> 338.71 </td> <td> 10.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202234_s_at </td> <td> 202234_s_at </td> <td> BF511091 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF511091 /FEA=EST /DB_XREF=gi:11594389 /DB_XREF=est:UI-H-BI4-apn-c-05-0-UI.s1 /CLONE=IMAGE:3087753 /UG=Hs.75231 solute carrier family 16 (monocarboxylic acid transporters), member 1 /FL=gb:NM_003051.1 gb:L31801.1 </td> <td> BF511091 </td> <td> solute carrier family 16 (monocarboxylate transporter), member 1 </td> <td> SLC16A1 </td> <td> 6566 </td> <td> NM_001166496 /// NM_003051 </td> <td> 0006090 // pyruvate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0015728 // mevalonate transport // traceable author statement /// 0035873 // lactate transmembrane transport // inferred from electronic annotation /// 0035879 // plasma membrane lactate transport // inferred from sequence or structural similarity /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015130 // mevalonate transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0097159 // organic cyclic compound binding // inferred from electronic annotation </td> <td> 102.50 </td> <td> 144.05 </td> <td> 10.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 207431_s_at </td> <td> 207431_s_at </td> <td> NM_003676 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003676.1 /DEF=Homo sapiens degenerative spermatocyte (homolog Drosophila; lipid desaturase) (DEGS), mRNA.  /FEA=mRNA /GEN=DEGS /PROD=degenerative spermatocyte /DB_XREF=gi:4505192 /UG=Hs.185973 degenerative spermatocyte (homolog Drosophila; lipid desaturase) /FL=gb:AF002668.1 gb:NM_003676.1 </td> <td> NM_003676 </td> <td> delta(4)-desaturase, sphingolipid 1 </td> <td> DEGS1 </td> <td> 8560 </td> <td> NM_003676 /// NM_144780 /// XM_006711839 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006636 // unsaturated fatty acid biosynthetic process // traceable author statement /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation </td> <td> 179.90 </td> <td> 170.15 </td> <td> 10.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 208975_s_at </td> <td> 208975_s_at </td> <td> L38951 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L38951.1 /DEF=Homo sapiens importin beta subunit mRNA, complete cds. /FEA=mRNA /PROD=importin beta subunit /DB_XREF=gi:893287 /UG=Hs.180446 karyopherin (importin) beta 1 /FL=gb:BC003572.1 gb:NM_002265.1 gb:L38951.1 </td> <td> L38951 </td> <td> karyopherin (importin) beta 1 </td> <td> KPNB1 </td> <td> 3837 </td> <td> NM_001276453 /// NM_002265 </td> <td> 0000060 // protein import into nucleus, translocation // traceable author statement /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006610 // ribosomal protein import into nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071782 // endoplasmic reticulum tubular network // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008270 // zinc ion binding // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 138.50 </td> <td> 203.55 </td> <td> 10.40 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 204614_at </td> <td> 204614_at </td> <td> NM_002575 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002575.1 /DEF=Homo sapiens serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2 (SERPINB2), mRNA.  /FEA=mRNA /GEN=SERPINB2 /PROD=serine (or cysteine) proteinase inhibitor, cladeB (ovalbumin), member 2 /DB_XREF=gi:4505594 /UG=Hs.75716 serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2 /FL=gb:J02685.1 gb:J03603.1 gb:M18082.1 gb:NM_002575.1 </td> <td> NM_002575 </td> <td> serpin peptidase inhibitor, clade B (ovalbumin), member 2 </td> <td> SERPINB2 </td> <td> 5055 </td> <td> NM_001143818 /// NM_002575 </td> <td> 0007596 // blood coagulation // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030162 // regulation of proteolysis // not recorded /// 0042060 // wound healing // inferred from electronic annotation /// 0042730 // fibrinolysis // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement </td> <td> 0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> -347.52 </td> <td> 402.96 </td> <td> -10.38 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202719_s_at </td> <td> 202719_s_at </td> <td> BC001451 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001451.1 /DEF=Homo sapiens, testin, clone MGC:1146, mRNA, complete cds. /FEA=mRNA /PROD=testin /DB_XREF=gi:12655188 /UG=Hs.165986 testin /FL=gb:AF245356.1 gb:AF245357.1 gb:BC001451.1 gb:NM_015641.1 </td> <td> BC001451 </td> <td> testis derived transcript (3 LIM domains) </td> <td> TES </td> <td> 26136 </td> <td> NM_015641 /// NM_152829 /// XM_005250258 </td> <td> 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0008270 // zinc ion binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -173.55 </td> <td> 182.82 </td> <td> -10.38 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201279_s_at </td> <td> 201279_s_at </td> <td> BC003064 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003064.1 /DEF=Homo sapiens, disabled (Drosophila) homolog 2 (mitogen-responsive phosphoprotein), clone MGC:1764, mRNA, complete cds.  /FEA=mRNA /PROD=disabled (Drosophila) homolog 2(mitogen-responsive phosphoprotein) /DB_XREF=gi:13111753 /UG=Hs.81988 disabled (Drosophila) homolog 2 (mitogen-responsive phosphoprotein) /FL=gb:U39050.1 gb:U53446.1 gb:BC003064.1 gb:NM_001343.1 </td> <td> BC003064 </td> <td> Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) /// uncharacterized LOC101926921 </td> <td> DAB2 /// LOC101926921 </td> <td> 1601 /// 101926921 </td> <td> NM_001244871 /// NM_001343 /// XR_241759 /// XR_249766 /// XR_251775 </td> <td> 0000904 // cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001921 // positive regulation of receptor recycling // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0006907 // pinocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007588 // excretion // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030099 // myeloid cell differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0032091 // negative regulation of protein binding // inferred from mutant phenotype /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0032968 // positive regulation of transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from direct assay /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 0061024 // membrane organization // traceable author statement /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from electronic annotation /// 2000096 // positive regulation of Wnt signaling pathway, planar cell polarity pathway // inferred from mutant phenotype /// 2000370 // positive regulation of clathrin-mediated endocytosis // inferred from mutant phenotype /// 2000643 // positive regulation of early endosome to late endosome transport // inferred from mutant phenotype /// 2001046 // positive regulation of integrin-mediated signaling pathway // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030132 // clathrin coat of coated pit // inferred from electronic annotation /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070022 // transforming growth factor beta receptor homodimeric complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0030276 // clathrin binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0035612 // AP-2 adaptor complex binding // inferred from electronic annotation /// 0035615 // clathrin adaptor activity // inferred from mutant phenotype /// 0038024 // cargo receptor activity // inferred from mutant phenotype /// 0046332 // SMAD binding // inferred from direct assay </td> <td> 230.80 </td> <td> 789.95 </td> <td> 10.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212226_s_at </td> <td> 212226_s_at </td> <td> AA628586 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA628586 /FEA=EST /DB_XREF=gi:2540973 /DB_XREF=est:af39f12.s1 /CLONE=IMAGE:1034063 /UG=Hs.173717 Homo sapiens phosphatidic acid phosphatase type 2B (PPAP2B), mRNA </td> <td> AA628586 </td> <td> phosphatidic acid phosphatase type 2B </td> <td> PPAP2B </td> <td> 8613 </td> <td> NM_003713 /// NM_177414 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0008354 // germ cell migration // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0030111 // regulation of Wnt signaling pathway // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0034109 // homotypic cell-cell adhesion // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0044328 // canonical Wnt signaling pathway involved in positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0044329 // canonical Wnt signaling pathway involved in positive regulation of cell-cell adhesion // inferred from mutant phenotype /// 0044330 // canonical Wnt signaling pathway involved in positive regulation of wound healing // inferred from mutant phenotype /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0060070 // canonical Wnt signaling pathway // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005912 // adherens junction // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // traceable author statement /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008195 // phosphatidate phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042577 // lipid phosphatase activity // inferred from electronic annotation </td> <td> -228.28 </td> <td> 226.49 </td> <td> -10.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200829_x_at </td> <td> 200829_x_at </td> <td> NM_003457 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003457.1 /DEF=Homo sapiens zinc finger protein 207 (ZNF207), mRNA. /FEA=mRNA /GEN=ZNF207 /PROD=zinc finger protein 207 /DB_XREF=gi:4508016 /UG=Hs.62112 zinc finger protein 207 /FL=gb:AF046001.1 gb:NM_003457.1 </td> <td> NM_003457 </td> <td> zinc finger protein 207 </td> <td> ZNF207 </td> <td> 7756 </td> <td> NM_001032293 /// NM_001098507 /// NM_003457 /// XM_005258028 /// XM_005258029 /// XM_005258030 </td> <td> 0000070 // mitotic sister chromatid segregation // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // inferred from mutant phenotype /// 0008608 // attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051983 // regulation of chromosome segregation // inferred from mutant phenotype </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from mutant phenotype /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 279.98 </td> <td> 580.26 </td> <td> 10.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 205379_at </td> <td> 205379_at </td> <td> NM_001236 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001236.2 /DEF=Homo sapiens carbonyl reductase 3 (CBR3), mRNA. /FEA=mRNA /GEN=CBR3 /PROD=carbonyl reductase 3 /DB_XREF=gi:7108334 /UG=Hs.154510 carbonyl reductase 3 /FL=gb:BC002812.1 gb:AB004854.1 gb:NM_001236.2 </td> <td> NM_001236 </td> <td> carbonyl reductase 3 </td> <td> CBR3 </td> <td> 874 </td> <td> NM_001236 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0042376 // phylloquinone catabolic process // inferred from electronic annotation /// 0050890 // cognition // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay </td> <td> 0000253 // 3-keto sterol reductase activity // inferred from electronic annotation /// 0004090 // carbonyl reductase (NADPH) activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from direct assay </td> <td> -187.48 </td> <td> 145.74 </td> <td> -10.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209294_x_at </td> <td> 209294_x_at </td> <td> BC001281 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001281.1 /DEF=Homo sapiens, tumor necrosis factor receptor superfamily, member 10b, clone MGC:5144, mRNA, complete cds.  /FEA=mRNA /PROD=tumor necrosis factor receptor superfamily,member 10b /DB_XREF=gi:12654874 /UG=Hs.51233 tumor necrosis factor receptor superfamily, member 10b /FL=gb:BC001281.1 gb:AF018658.1 gb:AF016849.1 gb:AF016266.1 </td> <td> BC001281 </td> <td> tumor necrosis factor receptor superfamily, member 10b </td> <td> TNFRSF10B </td> <td> 8795 </td> <td> NM_003842 /// NM_147187 /// NR_027140 /// XM_006716409 </td> <td> 0006915 // apoptotic process // non-traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // non-traceable author statement /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // non-traceable author statement /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from mutant phenotype /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0097190 // apoptotic signaling pathway // traceable author statement /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred by curator </td> <td> 0004872 // receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0045569 // TRAIL binding // non-traceable author statement </td> <td> -415.78 </td> <td> 386.19 </td> <td> -10.31 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218233_s_at </td> <td> 218233_s_at </td> <td> NM_017601 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017601.1 /DEF=Homo sapiens hypothetical protein DKFZp761H221 (DKFZp761H221), mRNA.  /FEA=mRNA /GEN=DKFZp761H221 /PROD=hypothetical protein DKFZp761H221 /DB_XREF=gi:8922168 /UG=Hs.10702 hypothetical protein DKFZp761H221 /FL=gb:NM_017601.1 </td> <td> NM_017601 </td> <td> prickle homolog 4 (Drosophila) /// translocase of outer mitochondrial membrane 6 homolog (yeast) </td> <td> PRICKLE4 /// TOMM6 </td> <td> 29964 /// 100188893 </td> <td> NM_001134493 /// NM_013397 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 275.20 </td> <td> 718.08 </td> <td> 10.30 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203794_at </td> <td> 203794_at </td> <td> NM_014826 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014826.1 /DEF=Homo sapiens KIAA0451 gene product (KIAA0451), mRNA. /FEA=mRNA /GEN=KIAA0451 /PROD=KIAA0451 gene product /DB_XREF=gi:7662135 /UG=Hs.18586 KIAA0451 gene product /FL=gb:AB007920.1 gb:NM_014826.1 </td> <td> NM_014826 </td> <td> CDC42 binding protein kinase alpha (DMPK-like) </td> <td> CDC42BPA </td> <td> 8476 </td> <td> NM_003607 /// NM_014826 /// XM_005273317 /// XM_005273318 /// XM_005273320 /// XM_005273321 /// XM_005273322 /// XM_005273323 /// XM_005273324 /// XM_006711834 /// XM_006711835 /// XM_006711836 /// XM_006711837 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007097 // nuclear migration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0031032 // actomyosin structure organization // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0031252 // cell leading edge // inferred from sequence or structural similarity /// 0042641 // actomyosin // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 133.58 </td> <td> 177.94 </td> <td> 10.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201331_s_at </td> <td> 201331_s_at </td> <td> BC004973 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004973.1 /DEF=Homo sapiens, signal transducer and activator of transcription 6, interleukin-4 induced, clone MGC:3649, mRNA, complete cds.  /FEA=mRNA /PROD=signal transducer and activator of transcription6, interleukin-4 induced /DB_XREF=gi:13436385 /UG=Hs.181015 signal transducer and activator of transcription 6, interleukin-4 induced /FL=gb:BC004973.1 gb:NM_003153.1 gb:U16031.1 </td> <td> BC004973 </td> <td> signal transducer and activator of transcription 6, interleukin-4 induced </td> <td> STAT6 </td> <td> 6778 </td> <td> NM_001178078 /// NM_001178079 /// NM_001178080 /// NM_001178081 /// NM_003153 /// NR_033659 /// XM_006719573 /// XM_006719574 /// XM_006719575 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0002296 // T-helper 1 cell lineage commitment // inferred from electronic annotation /// 0002829 // negative regulation of type 2 immune response // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0035771 // interleukin-4-mediated signaling pathway // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048295 // positive regulation of isotype switching to IgE isotypes // inferred from electronic annotation /// 0060443 // mammary gland morphogenesis // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 1902170 // cellular response to reactive nitrogen species // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0045121 // membrane raft // inferred from electronic annotation </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -99.17 </td> <td> 262.11 </td> <td> -10.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200699_at </td> <td> 200699_at </td> <td> BE962456 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE962456 /FEA=EST /DB_XREF=gi:11765376 /DB_XREF=est:601655751R1 /CLONE=IMAGE:3846156 /UG=Hs.118778 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 /FL=gb:NM_006854.2 </td> <td> BE962456 </td> <td> KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 </td> <td> KDELR2 </td> <td> 11014 </td> <td> NM_001100603 /// NM_006854 </td> <td> 0006621 // protein retention in ER lumen // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005801 // cis-Golgi network // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005046 // KDEL sequence binding // traceable author statement /// 0046923 // ER retention sequence binding // inferred from electronic annotation </td> <td> 208.77 </td> <td> 481.21 </td> <td> 10.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218618_s_at </td> <td> 218618_s_at </td> <td> NM_022763 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022763.1 /DEF=Homo sapiens hypothetical protein FLJ23399 (FLJ23399), mRNA. /FEA=mRNA /GEN=FLJ23399 /PROD=hypothetical protein FLJ23399 /DB_XREF=gi:12232434 /UG=Hs.299883 hypothetical protein FLJ23399 /FL=gb:NM_022763.1 </td> <td> NM_022763 </td> <td> fibronectin type III domain containing 3B /// uncharacterized LOC101928615 </td> <td> FNDC3B /// LOC101928615 </td> <td> 64778 /// 101928615 </td> <td> NM_001135095 /// NM_022763 /// XR_241616 /// XR_249499 /// XR_251497 </td> <td> 0045600 // positive regulation of fat cell differentiation // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -695.05 </td> <td> 978.00 </td> <td> -10.27 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202181_at </td> <td> 202181_at </td> <td> NM_014734 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014734.1 /DEF=Homo sapiens KIAA0247 gene product (KIAA0247), mRNA. /FEA=mRNA /GEN=KIAA0247 /PROD=KIAA0247 gene product /DB_XREF=gi:7662019 /UG=Hs.82426 KIAA0247 gene product /FL=gb:D87434.1 gb:NM_014734.1 </td> <td> NM_014734 </td> <td> KIAA0247 </td> <td> KIAA0247 </td> <td> 9766 </td> <td> NM_014734 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -137.53 </td> <td> 178.99 </td> <td> -10.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218901_at </td> <td> 218901_at </td> <td> NM_020353 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020353.1 /DEF=Homo sapiens phospholipid scramblase 4 (LOC57088), mRNA. /FEA=mRNA /GEN=LOC57088 /PROD=phospholipid scramblase 4 /DB_XREF=gi:9966818 /UG=Hs.182538 phospholipid scramblase 4 /FL=gb:AF199023.1 gb:NM_020353.1 </td> <td> NM_020353 </td> <td> phospholipid scramblase 4 </td> <td> PLSCR4 </td> <td> 57088 </td> <td> NM_001128304 /// NM_001128305 /// NM_001128306 /// NM_001177304 /// NM_020353 /// XM_005247654 /// XM_005247655 </td> <td> 0007596 // blood coagulation // non-traceable author statement /// 0017121 // phospholipid scrambling // non-traceable author statement /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0017128 // phospholipid scramblase activity // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0042609 // CD4 receptor binding // inferred from physical interaction </td> <td> -130.65 </td> <td> 252.70 </td> <td> -10.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200845_s_at </td> <td> 200845_s_at </td> <td> NM_004905 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004905.1 /DEF=Homo sapiens anti-oxidant protein 2 (non-selenium glutathione peroxidase, acidic calcium-independent phospholipase A2) (KIAA0106), mRNA.  /FEA=mRNA /GEN=KIAA0106 /PROD=anti-oxidant protein 2 (non-selenium glutathioneperoxidase, acidic calcium-independent phospholipase A2) /DB_XREF=gi:4758637 /UG=Hs.120 anti-oxidant protein 2 (non-selenium glutathione peroxidase, acidic calcium-independent phospholipase A2) /FL=gb:D14662.1 gb:NM_004905.1 </td> <td> NM_004905 </td> <td> peroxiredoxin 6 </td> <td> PRDX6 </td> <td> 9588 </td> <td> NM_004905 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from direct assay /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0042744 // hydrogen peroxide catabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004601 // peroxidase activity // inferred from electronic annotation /// 0004602 // glutathione peroxidase activity // inferred from electronic annotation /// 0004623 // phospholipase A2 activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016209 // antioxidant activity // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0051920 // peroxiredoxin activity // inferred from electronic annotation </td> <td> 126.07 </td> <td> 610.54 </td> <td> 10.22 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 213450_s_at </td> <td> 213450_s_at </td> <td> AI659611 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI659611 /FEA=EST /DB_XREF=gi:4763181 /DB_XREF=est:tu06a12.x1 /CLONE=IMAGE:2250238 /UG=Hs.14155 KIAA0653 protein, B7-like protein </td> <td> AI659611 </td> <td> inducible T-cell co-stimulator ligand </td> <td> ICOSLG </td> <td> 23308 </td> <td> NM_001283050 /// NM_001283051 /// NM_001283052 /// NM_015259 /// XM_005261098 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006952 // defense response // non-traceable author statement /// 0006972 // hyperosmotic response // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0042104 // positive regulation of activated T cell proliferation // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0042113 // B cell activation // inferred from electronic annotation /// 0045404 // positive regulation of interleukin-4 biosynthetic process // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -146.85 </td> <td> 146.78 </td> <td> -10.22 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 214436_at </td> <td> 214436_at </td> <td> AF176518 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF176518.1 /DEF=Homo sapiens leucine-rich repeat-containing F-box protein FBL2 mRNA, complete cds.  /FEA=mRNA /PROD=F-box protein FBL2 /DB_XREF=gi:6063089 /UG=Hs.6092 f-box and leucine-rich repeat protein 2 /FL=gb:AF186273.1 gb:AF176518.1 gb:AF174589.1 </td> <td> AF176518 </td> <td> F-box and leucine-rich repeat protein 2 </td> <td> FBXL2 </td> <td> 25827 </td> <td> NM_001171713 /// NM_012157 /// XM_005265014 /// XM_005265015 /// XM_005265016 /// XM_005265017 /// XR_427262 </td> <td> 0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006513 // protein monoubiquitination // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation </td> <td> 83.92 </td> <td> 60.31 </td> <td> 10.21 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 208934_s_at </td> <td> 208934_s_at </td> <td> AF342815 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF342815.1 /DEF=Homo sapiens colorectal carcinoma-derived galectin-8 variant I mRNA, complete cds.  /FEA=mRNA /PROD=colorectal carcinoma-derived galectin-8 variantI /DB_XREF=gi:13249298 /UG=Hs.4082 lectin, galactoside-binding, soluble, 8 (galectin 8) /FL=gb:AF342815.1 gb:L78132.1 gb:AF074000.1 gb:NM_006499.1 </td> <td> AF342815 </td> <td> lectin, galactoside-binding, soluble, 8 </td> <td> LGALS8 </td> <td> 3964 </td> <td> NM_006499 /// NM_201543 /// NM_201544 /// NM_201545 </td> <td> 0002317 // plasma cell differentiation // inferred from electronic annotation /// 0031295 // T cell costimulation // inferred from electronic annotation </td> <td> 0005615 // extracellular space // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> -120.62 </td> <td> 154.89 </td> <td> -10.20 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 204170_s_at </td> <td> 204170_s_at </td> <td> NM_001827 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001827.1 /DEF=Homo sapiens CDC28 protein kinase 2 (CKS2), mRNA. /FEA=mRNA /GEN=CKS2 /PROD=CDC28 protein kinase 2 /DB_XREF=gi:4502858 /UG=Hs.83758 CDC28 protein kinase 2 /FL=gb:NM_001827.1 </td> <td> NM_001827 </td> <td> CDC28 protein kinase regulatory subunit 2 </td> <td> CKS2 </td> <td> 1164 </td> <td> NM_001827 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0007049 // cell cycle // non-traceable author statement /// 0007051 // spindle organization // non-traceable author statement /// 0007127 // meiosis I // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td>  </td> <td> 0016538 // cyclin-dependent protein serine/threonine kinase regulator activity // inferred from electronic annotation </td> <td> 213.12 </td> <td> 365.46 </td> <td> 10.18 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212101_at </td> <td> 212101_at </td> <td> AU154321 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU154321 /FEA=EST /DB_XREF=gi:11015842 /DB_XREF=est:AU154321 /CLONE=NT2RP4000774 /UG=Hs.301553 karyopherin alpha 6 (importin alpha 7) /FL=gb:AF060543.1 gb:NM_012316.1 </td> <td> AU154321 </td> <td> karyopherin alpha 6 (importin alpha 7) </td> <td> KPNA6 </td> <td> 23633 </td> <td> NM_012316 /// XM_005270711 </td> <td> 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> 247.48 </td> <td> 241.34 </td> <td> 10.18 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203625_x_at </td> <td> 203625_x_at </td> <td> BG105365 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG105365 /FEA=EST /DB_XREF=gi:12599141 /DB_XREF=est:602312473F1 /CLONE=IMAGE:4422043 /UG=Hs.23348 S-phase kinase-associated protein 2 (p45) /FL=gb:NM_005983.1 gb:U33761.1 </td> <td> BG105365 </td> <td> S-phase kinase-associated protein 2, E3 ubiquitin protein ligase </td> <td> SKP2 </td> <td> 6502 </td> <td> NM_001243120 /// NM_005983 /// NM_032637 /// XM_006714487 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0000209 // protein polyubiquitination // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0071460 // cellular response to cell-matrix adhesion // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016235 // aggresome // inferred from direct assay /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 111.38 </td> <td> 80.06 </td> <td> 10.16 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 207442_at </td> <td> 207442_at </td> <td> NM_000759 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000759.1 /DEF=Homo sapiens colony stimulating factor 3 (granulocyte) (CSF3), mRNA.  /FEA=mRNA /GEN=CSF3 /PROD=colony stimulating factor 3 (granulocyte) /DB_XREF=gi:4503078 /UG=Hs.2233 colony stimulating factor 3 (granulocyte) /FL=gb:M17706.1 gb:NM_000759.1 </td> <td> NM_000759 </td> <td> colony stimulating factor 3 (granulocyte) </td> <td> CSF3 </td> <td> 1440 </td> <td> NM_000759 /// NM_001178147 /// NM_172219 /// NM_172220 /// NR_033662 </td> <td> 0006955 // immune response // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // non-traceable author statement /// 0030838 // positive regulation of actin filament polymerization // inferred from direct assay /// 0030851 // granulocyte differentiation // non-traceable author statement /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071345 // cellular response to cytokine stimulus // inferred from direct assay /// 1901215 // negative regulation of neuron death // inferred from electronic annotation /// 2000251 // positive regulation of actin cytoskeleton reorganization // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // non-traceable author statement /// 0005130 // granulocyte colony-stimulating factor receptor binding // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> -218.38 </td> <td> 112.91 </td> <td> -10.15 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201197_at </td> <td> 201197_at </td> <td> NM_001634 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001634.3 /DEF=Homo sapiens S-adenosylmethionine decarboxylase 1 (AMD1), mRNA. /FEA=mRNA /GEN=AMD1 /PROD=S-adenosylmethionine decarboxylase 1 precursor /DB_XREF=gi:5209326 /UG=Hs.262476 S-adenosylmethionine decarboxylase 1 /FL=gb:BC000171.2 gb:M21154.1 gb:NM_001634.3 </td> <td> NM_001634 </td> <td> adenosylmethionine decarboxylase 1 </td> <td> AMD1 </td> <td> 262 </td> <td> NM_001033059 /// NM_001287214 /// NM_001287215 /// NM_001287216 /// NM_001634 /// NR_109768 </td> <td> 0006557 // S-adenosylmethioninamine biosynthetic process // inferred from electronic annotation /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // inferred from electronic annotation /// 0008295 // spermidine biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0004014 // adenosylmethionine decarboxylase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation </td> <td> 84.78 </td> <td> 120.64 </td> <td> 10.12 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201462_at </td> <td> 201462_at </td> <td> NM_014766 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014766.1 /DEF=Homo sapiens KIAA0193 gene product (KIAA0193), mRNA. /FEA=mRNA /GEN=KIAA0193 /PROD=KIAA0193 gene product /DB_XREF=gi:7661983 /UG=Hs.75137 KIAA0193 gene product /FL=gb:D83777.1 gb:NM_014766.1 </td> <td> NM_014766 </td> <td> secernin 1 </td> <td> SCRN1 </td> <td> 9805 </td> <td> NM_001145513 /// NM_001145514 /// NM_001145515 /// NM_014766 /// XM_005249918 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006887 // exocytosis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0016805 // dipeptidase activity // inferred from electronic annotation </td> <td> 144.30 </td> <td> 281.57 </td> <td> 10.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 221903_s_at </td> <td> 221903_s_at </td> <td> BE046443 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE046443 /FEA=EST /DB_XREF=gi:8363496 /DB_XREF=est:hn47d10.x2 /CLONE=IMAGE:3026803 /UG=Hs.18827 KIAA0849 protein </td> <td> BE046443 </td> <td> cylindromatosis (turban tumor syndrome) </td> <td> CYLD </td> <td> 1540 </td> <td> NM_001042355 /// NM_001042412 /// NM_015247 /// XM_005255812 /// XM_006721148 /// XM_006721149 /// XM_006721150 /// XM_006721151 /// XM_006721152 /// XR_429714 </td> <td> 0002181 // cytoplasmic translation // not recorded /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007346 // regulation of mitotic cell cycle // inferred from mutant phenotype /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042347 // negative regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0070266 // necroptotic process // not recorded /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070507 // regulation of microtubule cytoskeleton organization // inferred from mutant phenotype /// 0070536 // protein K63-linked deubiquitination // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001242 // regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // not recorded /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0061578 // Lys63-specific deubiquitinase activity // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from physical interaction </td> <td> -122.40 </td> <td> 101.28 </td> <td> -10.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 215495_s_at </td> <td> 215495_s_at </td> <td> AL117523 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL117523.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434H0350 (from clone DKFZp434H0350); partial cds.  /FEA=mRNA /GEN=DKFZp434H0350 /PROD=hypothetical protein /DB_XREF=gi:5912039 /UG=Hs.173571 KIAA1053 protein </td> <td> AL117523 </td> <td> sterile alpha motif domain containing 4A </td> <td> SAMD4A </td> <td> 23034 </td> <td> NM_001161576 /// NM_001161577 /// NM_015589 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0030371 // translation repressor activity // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -165.88 </td> <td> 110.49 </td> <td> -10.06 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 210511_s_at </td> <td> 210511_s_at </td> <td> M13436 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M13436.1 /DEF=Human ovarian beta-A inhibin mRNA, complete cds. /FEA=mRNA /GEN=INHBA /DB_XREF=gi:186414 /UG=Hs.727 inhibin, beta A (activin A, activin AB alpha polypeptide) /FL=gb:M13436.1 </td> <td> M13436 </td> <td> inhibin, beta A </td> <td> INHBA </td> <td> 3624 </td> <td> NM_002192 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0001541 // ovarian follicle development // inferred from genetic interaction /// 0001541 // ovarian follicle development // non-traceable author statement /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from genetic interaction /// 0002244 // hematopoietic progenitor cell differentiation // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006952 // defense response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008584 // male gonad development // inferred from genetic interaction /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // traceable author statement /// 0030218 // erythrocyte differentiation // non-traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0032270 // positive regulation of cellular protein metabolic process // inferred from direct assay /// 0032924 // activin receptor signaling pathway // inferred from direct assay /// 0035987 // endodermal cell differentiation // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // traceable author statement /// 0042476 // odontogenesis // inferred from genetic interaction /// 0042493 // response to drug // inferred from direct assay /// 0042541 // hemoglobin biosynthetic process // inferred from direct assay /// 0042701 // progesterone secretion // inferred from genetic interaction /// 0045077 // negative regulation of interferon-gamma biosynthetic process // traceable author statement /// 0045578 // negative regulation of B cell differentiation // traceable author statement /// 0045648 // positive regulation of erythrocyte differentiation // inferred from direct assay /// 0045650 // negative regulation of macrophage differentiation // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046880 // regulation of follicle-stimulating hormone secretion // inferred from genetic interaction /// 0046881 // positive regulation of follicle-stimulating hormone secretion // traceable author statement /// 0046882 // negative regulation of follicle-stimulating hormone secretion // non-traceable author statement /// 0048333 // mesodermal cell differentiation // inferred from electronic annotation /// 0051799 // negative regulation of hair follicle development // inferred from direct assay /// 0060021 // palate development // inferred from genetic interaction /// 0060279 // positive regulation of ovulation // inferred from sequence or structural similarity /// 0061029 // eyelid development in camera-type eye // inferred from sequence or structural similarity /// 0071372 // cellular response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation /// 0097191 // extrinsic apoptotic signaling pathway // inferred from direct assay /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0043509 // activin A complex // inferred from direct assay /// 0043512 // inhibin A complex // inferred from direct assay </td> <td> 0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005179 // hormone activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // traceable author statement /// 0017046 // peptide hormone binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0070699 // type II activin receptor binding // inferred from physical interaction </td> <td> -363.58 </td> <td> 254.59 </td> <td> -10.04 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202637_s_at </td> <td> 202637_s_at </td> <td> AI608725 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI608725 /FEA=EST /DB_XREF=gi:4617892 /DB_XREF=est:tw90b01.x1 /CLONE=IMAGE:2266921 /UG=Hs.168383 intercellular adhesion molecule 1 (CD54), human rhinovirus receptor /FL=gb:M24283.1 gb:J03132.1 gb:NM_000201.1 </td> <td> AI608725 </td> <td> intercellular adhesion molecule 1 </td> <td> ICAM1 </td> <td> 3383 </td> <td> NM_000201 </td> <td> 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001910 // regulation of leukocyte mediated cytotoxicity // traceable author statement /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0002291 // T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell // inferred from mutant phenotype /// 0002457 // T cell antigen processing and presentation // inferred from electronic annotation /// 0002693 // positive regulation of cellular extravasation // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from direct assay /// 0007157 // heterophilic cell-cell adhesion // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from mutant phenotype /// 0007569 // cell aging // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0010477 // response to sulfur dioxide // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0022614 // membrane to membrane docking // inferred from expression pattern /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0031669 // cellular response to nutrient levels // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033627 // cell adhesion mediated by integrin // inferred from electronic annotation /// 0034698 // response to gonadotropin // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043200 // response to amino acid // inferred from electronic annotation /// 0044406 // adhesion of symbiont to host // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0046813 // receptor-mediated virion attachment to host cell // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // inferred from expression pattern /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0061028 // establishment of endothelial barrier // inferred from genetic interaction /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071312 // cellular response to alkaloid // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071347 // cellular response to interleukin-1 // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from direct assay </td> <td> 0001772 // immunological synapse // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005178 // integrin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> -2598.00 </td> <td> 1415.55 </td> <td> -10.04 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 214096_s_at </td> <td> 214096_s_at </td> <td> AW190316 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW190316 /FEA=EST /DB_XREF=gi:6464796 /DB_XREF=est:xl13g08.x1 /CLONE=IMAGE:2676158 /UG=Hs.2186 eukaryotic translation elongation factor 1 gamma </td> <td> AW190316 </td> <td> serine hydroxymethyltransferase 2 (mitochondrial) </td> <td> SHMT2 </td> <td> 6472 </td> <td> NM_001166356 /// NM_001166357 /// NM_001166358 /// NM_001166359 /// NM_005412 /// NR_029415 /// NR_029416 /// NR_029417 /// NR_048562 </td> <td> 0006544 // glycine metabolic process // inferred from electronic annotation /// 0006545 // glycine biosynthetic process // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from electronic annotation /// 0006564 // L-serine biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0019264 // glycine biosynthetic process from serine // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004372 // glycine hydroxymethyltransferase activity // inferred from direct assay /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008732 // L-allo-threonine aldolase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> -509.35 </td> <td> 600.70 </td> <td> -10.03 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 205599_at </td> <td> 205599_at </td> <td> NM_005658 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005658.1 /DEF=Homo sapiens TNF receptor-associated factor 1 (TRAF1), mRNA. /FEA=mRNA /GEN=TRAF1 /PROD=TNF receptor-associated factor 1 /DB_XREF=gi:5032192 /UG=Hs.2134 TNF receptor-associated factor 1 /FL=gb:NM_005658.1 gb:U19261.1 </td> <td> NM_005658 </td> <td> TNF receptor-associated factor 1 </td> <td> TRAF1 </td> <td> 7185 </td> <td> NM_001190945 /// NM_001190947 /// NM_005658 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from reviewed computational analysis /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 2001236 // regulation of extrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0005737 // cytoplasm // traceable author statement </td> <td> 0005164 // tumor necrosis factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031996 // thioesterase binding // inferred from physical interaction </td> <td> -106.18 </td> <td> 86.11 </td> <td> -9.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200011_s_at </td> <td> 200011_s_at </td> <td> NM_001659 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001659.1 /DEF=Homo sapiens ADP-ribosylation factor 3 (ARF3), mRNA. /FEA=mRNA /GEN=ARF3 /PROD=ADP-ribosylation factor 3 /DB_XREF=gi:4502202 /UG=Hs.119177 ADP-ribosylation factor 3 /FL=gb:M74491.1 gb:NM_001659.1 </td> <td> NM_001659 </td> <td> ADP-ribosylation factor 3 </td> <td> ARF3 </td> <td> 377 </td> <td> NM_001659 /// XM_005268856 /// XM_006719391 </td> <td> 0006184 // GTP catabolic process // traceable author statement /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation </td> <td> 173.50 </td> <td> 325.52 </td> <td> 9.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 219181_at </td> <td> 219181_at </td> <td> NM_006033 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006033.1 /DEF=Homo sapiens lipase, endothelial (LIPG), mRNA. /FEA=mRNA /GEN=LIPG /PROD=endothelial lipase precursor /DB_XREF=gi:5174496 /UG=Hs.65370 lipase, endothelial /FL=gb:AF118767.1 gb:NM_006033.1 </td> <td> NM_006033 </td> <td> lipase, endothelial </td> <td> LIPG </td> <td> 9388 </td> <td> NM_006033 /// XM_005258390 </td> <td> 0006629 // lipid metabolic process // traceable author statement /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // non-traceable author statement /// 0010983 // positive regulation of high-density lipoprotein particle clearance // inferred from mutant phenotype /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0032376 // positive regulation of cholesterol transport // inferred from direct assay /// 0034375 // high-density lipoprotein particle remodeling // inferred from mutant phenotype /// 0042632 // cholesterol homeostasis // inferred from mutant phenotype /// 0043691 // reverse cholesterol transport // inferred from mutant phenotype /// 0050746 // regulation of lipoprotein metabolic process // inferred from electronic annotation /// 0055091 // phospholipid homeostasis // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004465 // lipoprotein lipase activity // inferred from electronic annotation /// 0004620 // phospholipase activity // inferred from direct assay /// 0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0008970 // phosphatidylcholine 1-acylhydrolase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -475.70 </td> <td> 610.35 </td> <td> -9.97 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203917_at </td> <td> 203917_at </td> <td> NM_001338 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001338.1 /DEF=Homo sapiens coxsackie virus and adenovirus receptor (CXADR), mRNA. /FEA=mRNA /GEN=CXADR /PROD=coxsackie virus and adenovirus receptor /DB_XREF=gi:4503172 /UG=Hs.79187 coxsackie virus and adenovirus receptor /FL=gb:BC003684.1 gb:U90716.1 gb:NM_001338.1 </td> <td> NM_001338 </td> <td> coxsackie virus and adenovirus receptor </td> <td> CXADR </td> <td> 1525 </td> <td> NM_001207063 /// NM_001207064 /// NM_001207065 /// NM_001207066 /// NM_001338 </td> <td> 0007005 // mitochondrion organization // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from direct assay /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0008354 // germ cell migration // inferred from sequence or structural similarity /// 0009615 // response to virus // inferred from electronic annotation /// 0010669 // epithelial structure maintenance // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030593 // neutrophil chemotaxis // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0034109 // homotypic cell-cell adhesion // inferred from direct assay /// 0045216 // cell-cell junction organization // inferred from sequence or structural similarity /// 0046629 // gamma-delta T cell activation // inferred from sequence or structural similarity /// 0048739 // cardiac muscle fiber development // inferred from sequence or structural similarity /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051607 // defense response to virus // inferred from direct assay /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0070633 // transepithelial transport // inferred from mutant phenotype /// 0086067 // AV node cell to bundle of His cell communication // inferred from sequence or structural similarity </td> <td> 0001669 // acrosomal vesicle // inferred from sequence or structural similarity /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from direct assay /// 0005923 // tight junction // inferred from direct assay /// 0014704 // intercalated disc // inferred from direct assay /// 0014704 // intercalated disc // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016327 // apicolateral plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0031594 // neuromuscular junction // inferred from direct assay /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from direct assay /// 0044297 // cell body // inferred from sequence or structural similarity /// 0045121 // membrane raft // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from direct assay /// 0050839 // cell adhesion molecule binding // inferred from physical interaction /// 0071253 // connexin binding // inferred from sequence or structural similarity </td> <td> 93.45 </td> <td> 89.65 </td> <td> 9.95 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200629_at </td> <td> 200629_at </td> <td> NM_004184 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004184.2 /DEF=Homo sapiens tryptophanyl-tRNA synthetase (WARS), mRNA. /FEA=mRNA /GEN=WARS /PROD=tryptophanyl-tRNA synthetase /DB_XREF=gi:7710155 /UG=Hs.82030 tryptophanyl-tRNA synthetase /FL=gb:M77804.1 gb:M61715.1 gb:NM_004184.2 </td> <td> NM_004184 </td> <td> tryptophanyl-tRNA synthetase </td> <td> WARS </td> <td> 7453 </td> <td> NM_004184 /// NM_173701 /// NM_213645 /// NM_213646 /// XM_005268044 /// XM_006720248 /// XM_006720249 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006436 // tryptophanyl-tRNA aminoacylation // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045765 // regulation of angiogenesis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004830 // tryptophan-tRNA ligase activity // non-traceable author statement /// 0004830 // tryptophan-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -499.85 </td> <td> 747.55 </td> <td> -9.91 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202847_at </td> <td> 202847_at </td> <td> NM_004563 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004563.1 /DEF=Homo sapiens phosphoenolpyruvate carboxykinase 2 (mitochondrial) (PCK2), mRNA.  /FEA=mRNA /GEN=PCK2 /PROD=phosphoenolpyruvate carboxykinase 2(mitochondrial) /DB_XREF=gi:4758885 /UG=Hs.75812 phosphoenolpyruvate carboxykinase 2 (mitochondrial) /FL=gb:BC001454.1 gb:NM_004563.1 </td> <td> NM_004563 </td> <td> phosphoenolpyruvate carboxykinase 2 (mitochondrial) </td> <td> PCK2 </td> <td> 5106 </td> <td> NM_001018073 /// NM_001291556 /// NM_004563 /// XM_005267726 /// XM_006720157 /// XM_006720158 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // traceable author statement /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0006116 // NADH oxidation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004611 // phosphoenolpyruvate carboxykinase activity // traceable author statement /// 0004613 // phosphoenolpyruvate carboxykinase (GTP) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0017076 // purine nucleotide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -160.05 </td> <td> 137.18 </td> <td> -9.91 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 208718_at </td> <td> 208718_at </td> <td> Z97056 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:Z97056 /DEF=Human DNA sequence from clone RP3-434P1 on chromosome 22 Contains the KCNJ4 gene for inwardly rectifying potassium channel J4 (hippocampal inward rectifier, HIR, HRK1, HIRK2, KIR2.3), the KDELR3 gene for KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulu... /FEA=mRNA_5 /DB_XREF=gi:2832593 /UG=Hs.6179 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 17 (72kD) /FL=gb:BC000595.1 gb:NM_006386.2 gb:U59321.1 </td> <td> Z97056 </td> <td> DEAD (Asp-Glu-Ala-Asp) box helicase 17 </td> <td> DDX17 </td> <td> 10521 </td> <td> NM_001098504 /// NM_001098505 /// NM_006386 /// NM_030881 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0072358 // cardiovascular system development // inferred from electronic annotation /// 2001014 // regulation of skeletal muscle cell differentiation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003723 // RNA binding // traceable author statement /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008186 // RNA-dependent ATPase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 781.65 </td> <td> 989.55 </td> <td> 9.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202220_at </td> <td> 202220_at </td> <td> NM_014949 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014949.1 /DEF=Homo sapiens KIAA0907 protein (KIAA0907), mRNA. /FEA=mRNA /GEN=KIAA0907 /PROD=KIAA0907 protein /DB_XREF=gi:7662371 /UG=Hs.24656 KIAA0907 protein /FL=gb:AB020714.1 gb:NM_014949.1 </td> <td> NM_014949 </td> <td> KIAA0907 </td> <td> KIAA0907 </td> <td> 22889 </td> <td> NM_014949 </td> <td>  </td> <td>  </td> <td> 0003723 // RNA binding // inferred from electronic annotation </td> <td> 111.18 </td> <td> 125.74 </td> <td> 9.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212036_s_at </td> <td> 212036_s_at </td> <td> AW152664 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW152664 /FEA=EST /DB_XREF=gi:6200564 /DB_XREF=est:xf77g02.x1 /CLONE=IMAGE:2624114 /UG=Hs.44499 pinin, desmosome associated protein </td> <td> AW152664 </td> <td> pinin, desmosome associated protein </td> <td> PNN </td> <td> 5411 </td> <td> NM_002687 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005198 // structural molecule activity // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 121.35 </td> <td> 86.22 </td> <td> 9.88 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202239_at </td> <td> 202239_at </td> <td> NM_006437 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006437.2 /DEF=Homo sapiens ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 (ADPRTL1), mRNA.  /FEA=mRNA /GEN=ADPRTL1 /PROD=poly(ADP-ribosyl)transferase-like 1 /DB_XREF=gi:11496990 /UG=Hs.77225 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 1 /FL=gb:NM_006437.2 gb:AF057160.1 gb:AF158255.1 </td> <td> NM_006437 </td> <td> poly (ADP-ribose) polymerase family, member 4 </td> <td> PARP4 </td> <td> 143 </td> <td> NM_006437 </td> <td> 0006281 // DNA repair // non-traceable author statement /// 0006464 // cellular protein modification process // inferred from direct assay /// 0006471 // protein ADP-ribosylation // non-traceable author statement /// 0006810 // transport // non-traceable author statement /// 0006954 // inflammatory response // inferred from mutant phenotype /// 0006974 // cellular response to DNA damage stimulus // non-traceable author statement /// 0008219 // cell death // inferred from mutant phenotype /// 0042493 // response to drug // non-traceable author statement </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // traceable author statement /// 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from direct assay /// 0003950 // NAD+ ADP-ribosyltransferase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from direct assay </td> <td> 128.45 </td> <td> 244.28 </td> <td> 9.88 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202911_at </td> <td> 202911_at </td> <td> NM_000179 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000179.1 /DEF=Homo sapiens mutS (E. coli) homolog 6 (MSH6), mRNA. /FEA=mRNA /GEN=MSH6 /PROD=mutS (E. coli) homolog 6 /DB_XREF=gi:4504190 /UG=Hs.3248 mutS (E. coli) homolog 6 /FL=gb:U28946.1 gb:BC004246.1 gb:NM_000179.1 gb:U54777.2 </td> <td> NM_000179 </td> <td> mutS homolog 6 </td> <td> MSH6 </td> <td> 2956 </td> <td> NM_000179 /// NM_001281492 /// NM_001281493 /// NM_001281494 /// XM_005264271 </td> <td> 0000710 // meiotic mismatch repair // not recorded /// 0000710 // meiotic mismatch repair // inferred from sequence or structural similarity /// 0006200 // ATP catabolic process // not recorded /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006281 // DNA repair // inferred from direct assay /// 0006298 // mismatch repair // inferred from direct assay /// 0006298 // mismatch repair // inferred from genetic interaction /// 0006298 // mismatch repair // inferred from mutant phenotype /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // not recorded /// 0008340 // determination of adult lifespan // inferred from sequence or structural similarity /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // not recorded /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from sequence or structural similarity /// 0009411 // response to UV // not recorded /// 0009411 // response to UV // inferred from sequence or structural similarity /// 0016446 // somatic hypermutation of immunoglobulin genes // not recorded /// 0016446 // somatic hypermutation of immunoglobulin genes // inferred from sequence or structural similarity /// 0016447 // somatic recombination of immunoglobulin gene segments // inferred from sequence or structural similarity /// 0043570 // maintenance of DNA repeat elements // inferred from mutant phenotype /// 0045190 // isotype switching // not recorded /// 0045190 // isotype switching // inferred from sequence or structural similarity /// 0045910 // negative regulation of DNA recombination // inferred from direct assay /// 0051096 // positive regulation of helicase activity // inferred from direct assay /// 0097193 // intrinsic apoptotic signaling pathway // inferred from sequence or structural similarity </td> <td> 0000228 // nuclear chromosome // not recorded /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0032301 // MutSalpha complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000400 // four-way junction DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008094 // DNA-dependent ATPase activity // not recorded /// 0016887 // ATPase activity // inferred from direct assay /// 0030983 // mismatched DNA binding // inferred from direct assay /// 0032137 // guanine/thymine mispair binding // inferred from direct assay /// 0032142 // single guanine insertion binding // inferred from direct assay /// 0032143 // single thymine insertion binding // inferred from direct assay /// 0032357 // oxidized purine DNA binding // inferred from direct assay /// 0032405 // MutLalpha complex binding // inferred from direct assay /// 0035064 // methylated histone binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043531 // ADP binding // inferred from direct assay </td> <td> 134.93 </td> <td> 175.81 </td> <td> 9.88 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218071_s_at </td> <td> 218071_s_at </td> <td> NM_014160 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014160.2 /DEF=Homo sapiens HSPC070 protein (HSPC070), mRNA. /FEA=mRNA /GEN=HSPC070 /PROD=HSPC070 protein /DB_XREF=gi:8850222 /UG=Hs.279474 HSPC070 protein /FL=gb:AF302084.1 gb:AF161555.2 gb:NM_014160.2 </td> <td> NM_014160 </td> <td> makorin ring finger protein 2 </td> <td> MKRN2 </td> <td> 23609 </td> <td> NM_001271707 /// NM_014160 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 86.27 </td> <td> 98.56 </td> <td> 9.86 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 216215_s_at </td> <td> 216215_s_at </td> <td> AL049748 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049748 /DEF=Human DNA sequence from clone RP1-41P2 on chromosome 22 Contains the 3 part of the RBM9 gene for RNA binding motif protein 9 and the 3 part of the gene for a novel protein similar to part of APOL (apolipoprotein L) and TNF-inducible protein CG12... /FEA=mRNA_2 /DB_XREF=gi:6572235 /UG=Hs.5011 RNA binding motif protein 9 </td> <td> AL049748 </td> <td> RNA binding protein, fox-1 homolog (C. elegans) 2 </td> <td> RBFOX2 </td> <td> 23543 </td> <td> NM_001031695 /// NM_001082576 /// NM_001082577 /// NM_001082578 /// NM_001082579 /// NM_014309 /// XM_005261428 /// XM_005261429 /// XM_005261430 /// XM_005261431 /// XM_005261432 /// XM_005261433 /// XM_005261435 /// XM_005261437 /// XM_006724185 /// XM_006724186 /// XM_006724187 /// XM_006724188 /// XM_006724189 /// XM_006724190 /// XM_006724191 /// XM_006724192 /// XM_006724193 /// XM_006724194 </td> <td> 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from sequence or structural similarity /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010724 // regulation of definitive erythrocyte differentiation // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0021942 // radial glia guided migration of Purkinje cell // inferred from electronic annotation /// 0030520 // intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0042127 // regulation of cell proliferation // traceable author statement /// 0043484 // regulation of RNA splicing // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003723 // RNA binding // inferred from direct assay /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 207.35 </td> <td> 231.38 </td> <td> 9.84 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202892_at </td> <td> 202892_at </td> <td> NM_004661 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004661.1 /DEF=Homo sapiens CDC23 (cell division cycle 23, yeast, homolog) (CDC23), mRNA.  /FEA=mRNA /GEN=CDC23 /PROD=cell division cycle 23, yeast homolog; CDC23 /DB_XREF=gi:4757947 /UG=Hs.153546 CDC23 (cell division cycle 23, yeast, homolog) /FL=gb:AF053977.1 gb:AB011472.1 gb:NM_004661.1 gb:AF191341.1 </td> <td> NM_004661 </td> <td> cell division cycle 23 </td> <td> CDC23 </td> <td> 8697 </td> <td> NM_004661 </td> <td> 0000080 // mitotic G1 phase // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007049 // cell cycle // traceable author statement /// 0007067 // mitotic nuclear division // inferred from direct assay /// 0007080 // mitotic metaphase plate congression // inferred from direct assay /// 0007091 // metaphase/anaphase transition of mitotic cell cycle // traceable author statement /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0007096 // regulation of exit from mitosis // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030071 // regulation of mitotic metaphase/anaphase transition // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 82.10 </td> <td> 91.90 </td> <td> 9.84 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 211113_s_at </td> <td> 211113_s_at </td> <td> U34919 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U34919.1 /DEF=Human white homolog (white) mRNA, complete cds. /FEA=mRNA /GEN=white /PROD=white homolog /DB_XREF=gi:1314276 /UG=Hs.10237 ATP-binding cassette, sub-family G (WHITE), member 1 /FL=gb:U34919.1 </td> <td> U34919 </td> <td> ATP-binding cassette, sub-family G (WHITE), member 1 </td> <td> ABCG1 </td> <td> 9619 </td> <td> NM_004915 /// NM_016818 /// NM_207174 /// NM_207627 /// NM_207628 /// NM_207629 /// NM_207630 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from direct assay /// 0009720 // detection of hormone stimulus // non-traceable author statement /// 0010033 // response to organic substance // inferred from direct assay /// 0010745 // negative regulation of macrophage derived foam cell differentiation // traceable author statement /// 0010872 // regulation of cholesterol esterification // inferred from sequence or structural similarity /// 0010875 // positive regulation of cholesterol efflux // inferred from electronic annotation /// 0010887 // negative regulation of cholesterol storage // traceable author statement /// 0010888 // negative regulation of lipid storage // inferred from electronic annotation /// 0030301 // cholesterol transport // inferred from electronic annotation /// 0032367 // intracellular cholesterol transport // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from direct assay /// 0033700 // phospholipid efflux // inferred from mutant phenotype /// 0033993 // response to lipid // inferred from direct assay /// 0034374 // low-density lipoprotein particle remodeling // inferred from sequence or structural similarity /// 0034375 // high-density lipoprotein particle remodeling // inferred from sequence or structural similarity /// 0034436 // glycoprotein transport // inferred from direct assay /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0042987 // amyloid precursor protein catabolic process // inferred from direct assay /// 0043691 // reverse cholesterol transport // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0045542 // positive regulation of cholesterol biosynthetic process // inferred from sequence or structural similarity /// 0055085 // transmembrane transport // traceable author statement /// 0055091 // phospholipid homeostasis // inferred from mutant phenotype /// 0055099 // response to high density lipoprotein particle // inferred from electronic annotation /// 1901998 // toxin transport // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005768 // endosome // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred by curator /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005543 // phospholipid binding // inferred by curator /// 0005548 // phospholipid transporter activity // inferred from direct assay /// 0015485 // cholesterol binding // inferred by curator /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from direct assay /// 0017127 // cholesterol transporter activity // traceable author statement /// 0019534 // toxin transporter activity // inferred from direct assay /// 0034041 // sterol-transporting ATPase activity // inferred from direct assay /// 0034437 // glycoprotein transporter activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043531 // ADP binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // non-traceable author statement </td> <td> -105.28 </td> <td> 92.59 </td> <td> -9.84 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 220044_x_at </td> <td> 220044_x_at </td> <td> NM_016424 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016424.1 /DEF=Homo sapiens cisplatin resistance-associated overexpressed protein (LUC7A), mRNA.  /FEA=mRNA /GEN=LUC7A /PROD=cisplatin resistance-associated overexpressedprotein /DB_XREF=gi:7706534 /UG=Hs.3688 cisplatin resistance-associated overexpressed protein /FL=gb:NM_016424.1 </td> <td> NM_016424 </td> <td> LUC7-like 3 (S. cerevisiae) </td> <td> LUC7L3 </td> <td> 51747 </td> <td> NM_006107 /// NM_016424 /// XM_005257448 /// XM_005257449 /// XM_005257450 /// XM_005257451 /// XM_005257452 /// XM_005257454 /// XM_005257455 /// XM_006721943 /// XR_243663 </td> <td> 0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005685 // U1 snRNP // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 182.12 </td> <td> 149.74 </td> <td> 9.82 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201494_at </td> <td> 201494_at </td> <td> NM_005040 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005040.1 /DEF=Homo sapiens prolylcarboxypeptidase (angiotensinase C) (PRCP), mRNA.  /FEA=mRNA /GEN=PRCP /PROD=prolylcarboxypeptidase (angiotensinase C) /DB_XREF=gi:4826939 /UG=Hs.75693 prolylcarboxypeptidase (angiotensinase C) /FL=gb:L13977.1 gb:NM_005040.1 </td> <td> NM_005040 </td> <td> prolylcarboxypeptidase (angiotensinase C) </td> <td> PRCP </td> <td> 5547 </td> <td> NM_005040 /// NM_199418 /// XM_005274093 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007597 // blood coagulation, intrinsic pathway // traceable author statement </td> <td> 0005764 // lysosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004185 // serine-type carboxypeptidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -442.18 </td> <td> 1030.26 </td> <td> -9.79 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200666_s_at </td> <td> 200666_s_at </td> <td> NM_006145 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006145.1 /DEF=Homo sapiens heat shock 40kD protein 1 (HSPF1), mRNA. /FEA=mRNA /GEN=HSPF1 /PROD=heat shock 40kD protein 1 /DB_XREF=gi:5453689 /UG=Hs.82646 DnaJ (Hsp40) homolog, subfamily B, member 1 /FL=gb:BC002352.1 gb:NM_006145.1 gb:D49547.1 </td> <td> NM_006145 </td> <td> DnaJ (Hsp40) homolog, subfamily B, member 1 </td> <td> DNAJB1 </td> <td> 3337 </td> <td> NM_006145 /// XM_006722733 /// XM_006722734 /// XM_006722735 /// XM_006722736 </td> <td> 0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0070389 // chaperone cofactor-dependent protein refolding // inferred from direct assay /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001671 // ATPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0030544 // Hsp70 protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from physical interaction /// 0051117 // ATPase binding // inferred from physical interaction </td> <td> 99.80 </td> <td> 158.62 </td> <td> 9.77 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 823_at </td> <td> 823_at </td> <td> U84487 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> U84487 /FEATURE= /DEFINITION=HSU84487 Human CX3C chemokine precursor, mRNA, alternatively spliced, complete cds </td> <td> U84487 </td> <td> chemokine (C-X3-C motif) ligand 1 </td> <td> CX3CL1 </td> <td> 6376 </td> <td> NM_002996 </td> <td> 0006935 // chemotaxis // inferred from direct assay /// 0006952 // defense response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0030595 // leukocyte chemotaxis // traceable author statement /// 0032914 // positive regulation of transforming growth factor beta1 production // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0048246 // macrophage chemotaxis // inferred from electronic annotation /// 0048247 // lymphocyte chemotaxis // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from expression pattern /// 0050902 // leukocyte adhesive activation // traceable author statement /// 0051041 // positive regulation of calcium-independent cell-cell adhesion // inferred from direct assay /// 0060055 // angiogenesis involved in wound healing // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inferred from direct assay /// 0008009 // chemokine activity // traceable author statement </td> <td> -141.23 </td> <td> 98.21 </td> <td> -9.76 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 220990_s_at </td> <td> 220990_s_at </td> <td> NM_030938 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030938.1 /DEF=Homo sapiens hypothetical protein DKFZp566I133 (DKFZP566I133), mRNA.  /FEA=mRNA /GEN=DKFZP566I133 /PROD=hypothetical protein DKFZp566I133 /DB_XREF=gi:13569906 /FL=gb:NM_030938.1 </td> <td> NM_030938 </td> <td> microRNA 21 /// vacuole membrane protein 1 </td> <td> MIR21 /// VMP1 </td> <td> 81671 /// 406991 </td> <td> NM_030938 /// NR_029493 </td> <td> 0006914 // autophagy // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from electronic annotation /// 0010506 // regulation of autophagy // inferred from sequence or structural similarity /// 0016337 // single organismal cell-cell adhesion // inferred from mutant phenotype /// 0034329 // cell junction assembly // inferred from mutant phenotype </td> <td> 0000407 // pre-autophagosomal structure // inferred from electronic annotation /// 0000421 // autophagic vacuole membrane // inferred from sequence or structural similarity /// 0005773 // vacuole // inferred from electronic annotation /// 0005774 // vacuolar membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 107.90 </td> <td> 257.48 </td> <td> 9.74 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209946_at </td> <td> 209946_at </td> <td> U58111 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U58111.1 /DEF=Human FLT4 ligand mRNA, complete cds. /FEA=mRNA /PROD=FLT4 ligand DHM /DB_XREF=gi:1373426 /UG=Hs.79141 vascular endothelial growth factor C /FL=gb:U43142.1 gb:U58111.1 gb:NM_005429.1 </td> <td> U58111 </td> <td> vascular endothelial growth factor C </td> <td> VEGFC </td> <td> 7424 </td> <td> NM_005429 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006929 // substrate-dependent cell migration // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030947 // regulation of vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0031954 // positive regulation of protein autophosphorylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from electronic annotation /// 0045776 // negative regulation of blood pressure // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050714 // positive regulation of protein secretion // inferred from electronic annotation /// 0050918 // positive chemotaxis // inferred from direct assay /// 0050930 // induction of positive chemotaxis // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060754 // positive regulation of mast cell chemotaxis // inferred from direct assay /// 1901492 // positive regulation of lymphangiogenesis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042056 // chemoattractant activity // inferred from direct assay /// 0043185 // vascular endothelial growth factor receptor 3 binding // inferred from electronic annotation </td> <td> -212.57 </td> <td> 208.89 </td> <td> -9.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 207543_s_at </td> <td> 207543_s_at </td> <td> NM_000917 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000917.1 /DEF=Homo sapiens procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide I (P4HA1), mRNA.  /FEA=mRNA /GEN=P4HA1 /PROD=procollagen-proline, 2-oxoglutarate4-dioxygenase (proline 4-hydroxylase), alpha polypeptideI /DB_XREF=gi:4505564 /UG=Hs.76768 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide I /FL=gb:M24486.1 gb:NM_000917.1 </td> <td> NM_000917 </td> <td> prolyl 4-hydroxylase, alpha polypeptide I </td> <td> P4HA1 </td> <td> 5033 </td> <td> NM_000917 /// NM_001017962 /// NM_001142595 /// NM_001142596 </td> <td> 0018401 // peptidyl-proline hydroxylation to 4-hydroxy-L-proline // inferred from electronic annotation /// 0019511 // peptidyl-proline hydroxylation // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005581 // collagen trimer // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0004656 // procollagen-proline 4-dioxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -200.42 </td> <td> 300.71 </td> <td> -9.67 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 217492_s_at </td> <td> 217492_s_at </td> <td> AF023139 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF023139.1 /DEF=Homo sapiens multiple advanced cancers protein (MMAC1) pseudo mRNA, partial sequence.  /FEA=mRNA /GEN=MMAC1 /DB_XREF=gi:2749973 /UG=Hs.278506 phosphatase and tensin homolog (mutated in multiple advanced cancers 1), pseudogene 1 </td> <td> AF023139 </td> <td> phosphatase and tensin homolog /// phosphatase and tensin homolog pseudogene 1 (functional) </td> <td> PTEN /// PTENP1 </td> <td> 5728 /// 11191 </td> <td> NM_000314 /// NR_023917 /// XM_006717926 /// XM_006717927 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0002902 // regulation of B cell apoptotic process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006915 // apoptotic process // inferred from sequence or structural similarity /// 0007092 // activation of mitotic anaphase-promoting complex activity // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007270 // neuron-neuron synaptic transmission // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0007613 // memory // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009749 // response to glucose // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0014067 // negative regulation of phosphatidylinositol 3-kinase signaling // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from sequence or structural similarity /// 0021542 // dentate gyrus development // inferred from sequence or structural similarity /// 0021955 // central nervous system neuron axonogenesis // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031642 // negative regulation of myelination // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0031658 // negative regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle // inferred from direct assay /// 0032286 // central nervous system myelin maintenance // inferred from sequence or structural similarity /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032535 // regulation of cellular component size // inferred from sequence or structural similarity /// 0033032 // regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033198 // response to ATP // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from sequence or structural similarity /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042711 // maternal behavior // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043491 // protein kinase B signaling // inferred from sequence or structural similarity /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045475 // locomotor rhythm // inferred from sequence or structural similarity /// 0045792 // negative regulation of cell size // inferred from sequence or structural similarity /// 0046621 // negative regulation of organ growth // inferred from sequence or structural similarity /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from direct assay /// 0046856 // phosphatidylinositol dephosphorylation // inferred from direct assay /// 0046856 // phosphatidylinositol dephosphorylation // inferred from mutant phenotype /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048738 // cardiac muscle tissue development // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0048854 // brain morphogenesis // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050765 // negative regulation of phagocytosis // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051895 // negative regulation of focal adhesion assembly // inferred from mutant phenotype /// 0051898 // negative regulation of protein kinase B signaling // inferred from mutant phenotype /// 0060024 // rhythmic synaptic transmission // inferred from sequence or structural similarity /// 0060070 // canonical Wnt signaling pathway // inferred from direct assay /// 0060074 // synapse maturation // inferred from sequence or structural similarity /// 0060134 // prepulse inhibition // inferred from sequence or structural similarity /// 0060179 // male mating behavior // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0060292 // long term synaptic depression // inferred from electronic annotation /// 0060736 // prostate gland growth // inferred from electronic annotation /// 0060997 // dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061002 // negative regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0090071 // negative regulation of ribosome biogenesis // inferred from electronic annotation /// 0090344 // negative regulation of cell aging // inferred from electronic annotation /// 0090394 // negative regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 0097105 // presynaptic membrane assembly // inferred from sequence or structural similarity /// 0097107 // postsynaptic density assembly // inferred from sequence or structural similarity /// 2000060 // positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 2000808 // negative regulation of synaptic vesicle clustering // inferred from sequence or structural similarity /// 2001235 // positive regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0009898 // cytoplasmic side of plasma membrane // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0035749 // myelin sheath adaxonal region // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from direct assay /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from sequence or structural similarity /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004438 // phosphatidylinositol-3-phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0005161 // platelet-derived growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0010997 // anaphase-promoting complex binding // inferred from physical interaction /// 0016314 // phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity // inferred from direct assay /// 0016314 // phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0051717 // inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity // inferred from direct assay /// 0051717 // inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity // traceable author statement /// 0051800 // phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity // inferred from direct assay /// 0051800 // phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity // traceable author statement </td> <td> -134.92 </td> <td> 177.39 </td> <td> -9.65 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201193_at </td> <td> 201193_at </td> <td> NM_005896 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005896.1 /DEF=Homo sapiens isocitrate dehydrogenase 1 (NADP+), soluble (IDH1), mRNA.  /FEA=mRNA /GEN=IDH1 /PROD=isocitrate dehydrogenase 1 (NADP+), soluble /DB_XREF=gi:5174470 /UG=Hs.11223 isocitrate dehydrogenase 1 (NADP+), soluble /FL=gb:AF020038.1 gb:AF113917.1 gb:NM_005896.1 gb:AL136702.1 </td> <td> NM_005896 </td> <td> isocitrate dehydrogenase 1 (NADP+), soluble </td> <td> IDH1 </td> <td> 3417 </td> <td> NM_001282386 /// NM_001282387 /// NM_005896 </td> <td> 0006097 // glyoxylate cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006102 // isocitrate metabolic process // inferred from direct assay /// 0006103 // 2-oxoglutarate metabolic process // inferred from direct assay /// 0006103 // 2-oxoglutarate metabolic process // traceable author statement /// 0006740 // NADPH regeneration // traceable author statement /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005782 // peroxisomal matrix // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0004450 // isocitrate dehydrogenase (NADP+) activity // not recorded /// 0004450 // isocitrate dehydrogenase (NADP+) activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 146.85 </td> <td> 272.45 </td> <td> 9.63 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 217779_s_at </td> <td> 217779_s_at </td> <td> NM_017761 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017761.1 /DEF=Homo sapiens hypothetical protein FLJ20312 (FLJ20312), mRNA. /FEA=mRNA /GEN=FLJ20312 /PROD=hypothetical protein FLJ20312 /DB_XREF=gi:8923294 /UG=Hs.7862 hypothetical protein FLJ20312 /FL=gb:BC001959.1 gb:AF151042.1 gb:NM_017761.1 </td> <td> NM_017761 </td> <td> proline-rich nuclear receptor coactivator 2 </td> <td> PNRC2 </td> <td> 55629 </td> <td> NM_017761 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from sequence or structural similarity /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0021575 // hindbrain morphogenesis // inferred from electronic annotation /// 0021575 // hindbrain morphogenesis // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030900 // forebrain development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from sequence or structural similarity /// 0031087 // deadenylation-independent decapping of nuclear-transcribed mRNA // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from mutant phenotype /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035024 // negative regulation of Rho protein signal transduction // inferred from mutant phenotype /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from sequence or structural similarity /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051497 // negative regulation of stress fiber assembly // inferred from direct assay /// 1900119 // positive regulation of execution phase of apoptosis // inferred from direct assay </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005100 // Rho GTPase activator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0030675 // Rac GTPase activator activity // inferred from direct assay /// 0042169 // SH2 domain binding // inferred from physical interaction </td> <td> 260.00 </td> <td> 351.05 </td> <td> 9.62 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212641_at </td> <td> 212641_at </td> <td> AL023584 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL023584 /DEF=Human DNA sequence from clone 67K17 on chromosome 6q24.1-24.3. Contains the HIVEP2 (Schnurri-2) gene for HIV type 1 Enhancer-binding Protein 2, and a possible pseudogene in an intron of this gene. Contains STSs and GSSs and an AAAT repeat polymorp... /FEA=mRNA /DB_XREF=gi:3790154 /UG=Hs.75063 human immunodeficiency virus type I enhancer-binding protein 2 /FL=gb:NM_006734.1 </td> <td> AL023584 </td> <td> human immunodeficiency virus type I enhancer binding protein 2 </td> <td> HIVEP2 </td> <td> 3097 </td> <td> NM_006734 /// XM_005266957 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -75.70 </td> <td> 42.83 </td> <td> -9.62 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 204337_at </td> <td> 204337_at </td> <td> AL514445 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL514445 /FEA=EST /DB_XREF=gi:12777939 /DB_XREF=est:AL514445 /CLONE=CL0BB010ZF08 (3 prime) /UG=Hs.227571 regulator of G-protein signalling 4 /FL=gb:NM_005613.2 gb:BC000737.1 </td> <td> AL514445 </td> <td> regulator of G-protein signaling 4 </td> <td> RGS4 </td> <td> 5999 </td> <td> NM_001102445 /// NM_001113380 /// NM_001113381 /// NM_005613 </td> <td> 0000188 // inactivation of MAPK activity // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // not recorded /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // not recorded /// 0005516 // calmodulin binding // traceable author statement </td> <td> 246.20 </td> <td> 338.05 </td> <td> 9.61 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 210426_x_at </td> <td> 210426_x_at </td> <td> U04897 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U04897.1 /DEF=Human orphan hormone nuclear receptor RORalpha1 mRNA, complete cds.  /FEA=mRNA /PROD=RORalpha1 /DB_XREF=gi:451563 /UG=Hs.2156 RAR-related orphan receptor A /FL=gb:U04897.1 </td> <td> U04897 </td> <td> RAR-related orphan receptor A </td> <td> RORA </td> <td> 6095 </td> <td> NM_002943 /// NM_134260 /// NM_134261 /// NM_134262 /// XM_005254584 </td> <td> 0001525 // angiogenesis // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006805 // xenobiotic metabolic process // inferred from sequence or structural similarity /// 0006809 // nitric oxide biosynthetic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from mutant phenotype /// 0010906 // regulation of glucose metabolic process // inferred from sequence or structural similarity /// 0019218 // regulation of steroid metabolic process // inferred from sequence or structural similarity /// 0021702 // cerebellar Purkinje cell differentiation // inferred from electronic annotation /// 0021930 // cerebellar granule cell precursor proliferation // inferred from sequence or structural similarity /// 0030522 // intracellular receptor signaling pathway // inferred from direct assay /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0036315 // cellular response to sterol // inferred from direct assay /// 0036315 // cellular response to sterol // inferred from mutant phenotype /// 0042692 // muscle cell differentiation // inferred from mutant phenotype /// 0042753 // positive regulation of circadian rhythm // inferred from sequence or structural similarity /// 0043030 // regulation of macrophage activation // inferred from electronic annotation /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046068 // cGMP metabolic process // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from mutant phenotype /// 0060850 // regulation of transcription involved in cell fate commitment // inferred from sequence or structural similarity /// 0070328 // triglyceride homeostasis // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from mutant phenotype /// 0072539 // T-helper 17 cell differentiation // inferred from sequence or structural similarity /// 2000188 // regulation of cholesterol homeostasis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0001222 // transcription corepressor binding // inferred from physical interaction /// 0001223 // transcription coactivator binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008142 // oxysterol binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0098531 // direct ligand regulated sequence-specific DNA binding transcription factor activity // inferred from direct assay </td> <td> -86.30 </td> <td> 76.70 </td> <td> -9.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202497_x_at </td> <td> 202497_x_at </td> <td> AI631159 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI631159 /FEA=EST /DB_XREF=gi:4682489 /DB_XREF=est:ts93d05.x1 /CLONE=IMAGE:2238825 /UG=Hs.7594 solute carrier family 2 (facilitated glucose transporter), member 3 /FL=gb:M20681.1 gb:NM_006931.1 </td> <td> AI631159 </td> <td> solute carrier family 2 (facilitated glucose transporter), member 3 </td> <td> SLC2A3 </td> <td> 6515 </td> <td> NM_006931 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation </td> <td> -282.73 </td> <td> 149.51 </td> <td> -9.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200843_s_at </td> <td> 200843_s_at </td> <td> NM_004446 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004446.1 /DEF=Homo sapiens glutamyl-prolyl-tRNA synthetase (EPRS), mRNA. /FEA=mRNA /GEN=EPRS /PROD=glutamyl-prolyl tRNA synthetase /DB_XREF=gi:4758293 /UG=Hs.55921 glutamyl-prolyl-tRNA synthetase /FL=gb:NM_004446.1 </td> <td> NM_004446 </td> <td> glutamyl-prolyl-tRNA synthetase </td> <td> EPRS </td> <td> 2058 </td> <td> NM_004446 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006424 // glutamyl-tRNA aminoacylation // inferred from electronic annotation /// 0006433 // prolyl-tRNA aminoacylation // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0043039 // tRNA aminoacylation // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from direct assay </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004818 // glutamate-tRNA ligase activity // traceable author statement /// 0004827 // proline-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds // inferred from electronic annotation /// 0035613 // RNA stem-loop binding // inferred from direct assay </td> <td> -171.93 </td> <td> 298.91 </td> <td> -9.58 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201276_at </td> <td> 201276_at </td> <td> AF267863 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF267863.1 /DEF=Homo sapiens DC43 mRNA, complete cds. /FEA=mRNA /PROD=DC43 /DB_XREF=gi:12006052 /UG=Hs.77690 RAB5B, member RAS oncogene family /FL=gb:AF267863.1 gb:NM_002868.1 </td> <td> AF267863 </td> <td> RAB5B, member RAS oncogene family </td> <td> RAB5B </td> <td> 5869 </td> <td> NM_001252036 /// NM_001252037 /// NM_002868 /// XM_005269051 /// XM_005269052 /// XM_006719540 </td> <td> 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007032 // endosome organization // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from mutant phenotype /// 0030100 // regulation of endocytosis // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay /// 0030742 // GTP-dependent protein binding // inferred from direct assay </td> <td> 128.63 </td> <td> 135.01 </td> <td> 9.57 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201146_at </td> <td> 201146_at </td> <td> NM_006164 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006164.1 /DEF=Homo sapiens nuclear factor (erythroid-derived 2)-like 2 (NFE2L2), mRNA.  /FEA=mRNA /GEN=NFE2L2 /PROD=nuclear factor (erythroid-derived 2)-like 2 /DB_XREF=gi:5453775 /UG=Hs.155396 nuclear factor (erythroid-derived 2)-like 2 /FL=gb:NM_006164.1 </td> <td> NM_006164 </td> <td> nuclear factor, erythroid 2-like 2 </td> <td> NFE2L2 </td> <td> 4780 </td> <td> NM_001145412 /// NM_001145413 /// NM_006164 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0010499 // proteasomal ubiquitin-independent protein catabolic process // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030194 // positive regulation of blood coagulation // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from electronic annotation /// 0036003 // positive regulation of transcription from RNA polymerase II promoter in response to stress // inferred from mutant phenotype /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045995 // regulation of embryonic development // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from mutant phenotype /// 0071356 // cellular response to tumor necrosis factor // inferred from mutant phenotype /// 0071499 // cellular response to laminar fluid shear stress // inferred from mutant phenotype /// 1902176 // negative regulation of intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from mutant phenotype /// 2000121 // regulation of removal of superoxide radicals // inferred from electronic annotation /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from mutant phenotype /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from electronic annotation </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -123.80 </td> <td> 331.18 </td> <td> -9.56 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201325_s_at </td> <td> 201325_s_at </td> <td> NM_001423 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001423.1 /DEF=Homo sapiens epithelial membrane protein 1 (EMP1), mRNA. /FEA=mRNA /GEN=EMP1 /PROD=epithelial membrane protein 1 /DB_XREF=gi:4503558 /UG=Hs.79368 epithelial membrane protein 1 /FL=gb:U77085.1 gb:U43916.1 gb:NM_001423.1 </td> <td> NM_001423 </td> <td> epithelial membrane protein 1 </td> <td> EMP1 </td> <td> 2012 </td> <td> NM_001423 </td> <td> 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0016049 // cell growth // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 288.58 </td> <td> 370.71 </td> <td> 9.56 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212660_at </td> <td> 212660_at </td> <td> AI735639 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI735639 /FEA=EST /DB_XREF=gi:5057163 /DB_XREF=est:at18h12.x1 /CLONE=IMAGE:2355527 /UG=Hs.9729 KIAA0239 protein </td> <td> AI735639 </td> <td> jade family PHD finger 2 </td> <td> JADE2 </td> <td> 23338 </td> <td> NM_001289984 /// NM_001289985 /// NM_015288 /// XM_005271942 /// XM_005271943 /// XM_005271944 /// XM_005271945 /// XM_005271946 /// XM_005271947 /// XM_005271948 /// XM_005271949 /// XM_005271950 /// XM_005271951 </td> <td> 0043966 // histone H3 acetylation // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043983 // histone H4-K12 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay </td> <td> 0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -126.32 </td> <td> 180.64 </td> <td> -9.55 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209900_s_at </td> <td> 209900_s_at </td> <td> AL162079 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL162079.1 /DEF=Homo sapiens mRNA; cDNA DKFZp762B2310 (from clone DKFZp762B2310); complete cds.  /FEA=mRNA /GEN=DKFZp762B2310 /PROD=hypothetical protein /DB_XREF=gi:7328161 /UG=Hs.75231 solute carrier family 16 (monocarboxylic acid transporters), member 1 /FL=gb:AL162079.1 </td> <td> AL162079 </td> <td> solute carrier family 16 (monocarboxylate transporter), member 1 </td> <td> SLC16A1 </td> <td> 6566 </td> <td> NM_001166496 /// NM_003051 </td> <td> 0006090 // pyruvate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0015728 // mevalonate transport // traceable author statement /// 0035873 // lactate transmembrane transport // inferred from electronic annotation /// 0035879 // plasma membrane lactate transport // inferred from sequence or structural similarity /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015130 // mevalonate transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0097159 // organic cyclic compound binding // inferred from electronic annotation </td> <td> 103.70 </td> <td> 163.43 </td> <td> 9.55 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 213027_at </td> <td> 213027_at </td> <td> AU146655 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU146655 /FEA=EST /DB_XREF=gi:11008176 /DB_XREF=est:AU146655 /CLONE=HEMBB1001133 /UG=Hs.288178 Homo sapiens cDNA FLJ11968 fis, clone HEMBB1001133 </td> <td> AU146655 </td> <td> Homo sapiens RNA, has-miR-mizuguchi-9, complete sequence. /// TROVE domain family, member 2 </td> <td> AK022030 /// TROVE2 </td> <td> 6738 </td> <td> NM_001042369 /// NM_001042370 /// NM_001173524 /// NM_001173525 /// NM_004600 /// NR_033393 /// XM_006711495 /// XM_006711496 /// XM_006711497 </td> <td> 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0030030 // cell projection organization // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 91.50 </td> <td> 103.50 </td> <td> 9.55 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218237_s_at </td> <td> 218237_s_at </td> <td> NM_030674 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030674.1 /DEF=Homo sapiens amino acid transporter system A1 (ATA1), mRNA. /FEA=mRNA /GEN=ATA1 /PROD=amino acid transporter system A1 /DB_XREF=gi:13492978 /UG=Hs.18272 amino acid transporter system A1 /FL=gb:AF271070.1 gb:NM_030674.1 </td> <td> NM_030674 </td> <td> solute carrier family 38, member 1 </td> <td> SLC38A1 </td> <td> 81539 </td> <td> NM_001077484 /// NM_001278387 /// NM_001278388 /// NM_001278389 /// NM_001278390 /// NM_030674 </td> <td> 0001504 // neurotransmitter uptake // traceable author statement /// 0003333 // amino acid transmembrane transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0006868 // glutamine transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0015804 // neutral amino acid transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0030424 // axon // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005283 // sodium:amino acid symporter activity // non-traceable author statement /// 0015175 // neutral amino acid transmembrane transporter activity // non-traceable author statement /// 0015186 // L-glutamine transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation </td> <td> -426.63 </td> <td> 440.49 </td> <td> -9.54 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203687_at </td> <td> 203687_at </td> <td> NM_002996 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002996.1 /DEF=Homo sapiens small inducible cytokine subfamily D (Cys-X3-Cys), member 1 (fractalkine, neurotactin) (SCYD1), mRNA.  /FEA=mRNA /GEN=SCYD1 /PROD=small inducible cytokine subfamily D(Cys-X3-Cys), member 1 (fractalkine, neurotactin) /DB_XREF=gi:4506856 /UG=Hs.80420 small inducible cytokine subfamily D (Cys-X3-Cys), member 1 (fractalkine, neurotactin) /FL=gb:BC001163.1 gb:U84487.1 gb:U91835.1 gb:NM_002996.1 </td> <td> NM_002996 </td> <td> chemokine (C-X3-C motif) ligand 1 </td> <td> CX3CL1 </td> <td> 6376 </td> <td> NM_002996 </td> <td> 0006935 // chemotaxis // inferred from direct assay /// 0006952 // defense response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0030595 // leukocyte chemotaxis // traceable author statement /// 0032914 // positive regulation of transforming growth factor beta1 production // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0048246 // macrophage chemotaxis // inferred from electronic annotation /// 0048247 // lymphocyte chemotaxis // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from expression pattern /// 0050902 // leukocyte adhesive activation // traceable author statement /// 0051041 // positive regulation of calcium-independent cell-cell adhesion // inferred from direct assay /// 0060055 // angiogenesis involved in wound healing // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inferred from direct assay /// 0008009 // chemokine activity // traceable author statement </td> <td> -86.15 </td> <td> 61.02 </td> <td> -9.54 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209278_s_at </td> <td> 209278_s_at </td> <td> L27624 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L27624.1 /DEF=Homo sapiens tissue factor pathway inhibitor-2 mRNA, complete cds. /FEA=mRNA /PROD=tissue factor pathway inhibitor-2 /DB_XREF=gi:441149 /UG=Hs.295944 tissue factor pathway inhibitor 2 /FL=gb:BC005330.1 gb:L27624.1 gb:D29992.1 gb:NM_006528.1 </td> <td> L27624 </td> <td> tissue factor pathway inhibitor 2 </td> <td> TFPI2 </td> <td> 7980 </td> <td> NM_001271003 /// NM_001271004 /// NM_006528 </td> <td> 0006184 // GTP catabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0007602 // phototransduction // inferred from electronic annotation /// 0007603 // phototransduction, visible light // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0042462 // eye photoreceptor cell development // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation </td> <td> 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0097381 // photoreceptor disc membrane // traceable author statement </td> <td> 0003924 // GTPase activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> 323.57 </td> <td> 1091.06 </td> <td> 9.54 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 211678_s_at </td> <td> 211678_s_at </td> <td> AF090934 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF090934.1 /DEF=Homo sapiens clone HQ0518 PRO0518 mRNA, complete cds. /FEA=mRNA /PROD=PRO0518 /DB_XREF=gi:6690233 /FL=gb:AF090934.1 </td> <td> AF090934 </td> <td> ring finger protein 114 </td> <td> RNF114 </td> <td> 55905 </td> <td> NM_018683 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030948 // negative regulation of vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0032274 // gonadotropin secretion // inferred from expression pattern /// 0032274 // gonadotropin secretion // inferred from mutant phenotype /// 0034337 // RNA folding // inferred from direct assay /// 0040019 // positive regulation of embryonic development // inferred from sequence or structural similarity /// 0044029 // hypomethylation of CpG island // inferred from sequence or structural similarity /// 0045746 // negative regulation of Notch signaling pathway // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0048743 // positive regulation of skeletal muscle fiber development // inferred from sequence or structural similarity /// 2000279 // negative regulation of DNA biosynthetic process // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 80.78 </td> <td> 97.96 </td> <td> 9.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 219862_s_at </td> <td> 219862_s_at </td> <td> NM_012336 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012336.1 /DEF=Homo sapiens nuclear prelamin A recognition factor (NARF), mRNA. /FEA=mRNA /GEN=NARF /PROD=nuclear prelamin A recognition factor /DB_XREF=gi:6912523 /UG=Hs.256526 nuclear prelamin A recognition factor /FL=gb:AF128406.1 gb:NM_012336.1 </td> <td> NM_012336 </td> <td> nuclear prelamin A recognition factor </td> <td> NARF </td> <td> 26502 </td> <td> NM_001038618 /// NM_001083608 /// NM_012336 /// NM_031968 /// XM_005256340 /// XM_006722278 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005638 // lamin filament // inferred from direct assay /// 0005652 // nuclear lamina // traceable author statement /// 0031981 // nuclear lumen // inferred from direct assay </td> <td> 0005521 // lamin binding // inferred from physical interaction </td> <td> -111.90 </td> <td> 180.80 </td> <td> -9.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218150_at </td> <td> 218150_at </td> <td> NM_012097 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012097.1 /DEF=Homo sapiens ADP-ribosylation factor-like 5 (ARL5), mRNA. /FEA=mRNA /GEN=ARL5 /PROD=ADP-ribosylation factor-like 5 /DB_XREF=gi:6912243 /UG=Hs.42500 ADP-ribosylation factor-like 5 /FL=gb:BC001254.1 gb:AF100740.1 gb:NM_012097.1 </td> <td> NM_012097 </td> <td> ADP-ribosylation factor-like 5A /// uncharacterized LOC101929356 </td> <td> ARL5A /// LOC101929356 </td> <td> 26225 /// 101929356 </td> <td> NM_001037174 /// NM_012097 /// NM_177985 /// XR_241333 /// XR_249228 /// XR_251200 </td> <td> 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 203.93 </td> <td> 367.59 </td> <td> 9.50 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212534_at </td> <td> 212534_at </td> <td> AU144066 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU144066 /FEA=EST /DB_XREF=gi:11005587 /DB_XREF=est:AU144066 /CLONE=HEMBA1000798 /UG=Hs.285519 Homo sapiens cDNA FLJ11904 fis, clone HEMBB1000048 </td> <td> AU144066 </td> <td> zinc finger protein 24 </td> <td> ZNF24 </td> <td> 7572 </td> <td> NM_006965 /// XM_005258341 /// XM_005258342 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0042552 // myelination // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 108.47 </td> <td> 140.74 </td> <td> 9.49 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 211974_x_at </td> <td> 211974_x_at </td> <td> AL513759 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL513759 /FEA=EST /DB_XREF=gi:12777253 /DB_XREF=est:AL513759 /CLONE=CL0BA008ZD02 (3 prime) /UG=Hs.278573 Homo sapiens similar to J KAPPA-RECOMBINATION SIGNAL BINDING PROTEIN (M. musculus) (LOC65437), mRNA </td> <td> AL513759 </td> <td> recombination signal binding protein for immunoglobulin kappa J region </td> <td> RBPJ </td> <td> 3516 </td> <td> NM_005349 /// NM_015874 /// NM_203283 /// NM_203284 /// XM_005248161 /// XM_006713962 /// XM_006713963 /// XM_006713964 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001837 // epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002437 // inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003157 // endocardium development // inferred from electronic annotation /// 0003160 // endocardium morphogenesis // inferred from sequence or structural similarity /// 0003198 // epithelial to mesenchymal transition involved in endocardial cushion formation // inferred from sequence or structural similarity /// 0003214 // cardiac left ventricle morphogenesis // inferred from sequence or structural similarity /// 0003222 // ventricular trabecula myocardium morphogenesis // inferred from sequence or structural similarity /// 0003256 // regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation // inferred from sequence or structural similarity /// 0006310 // DNA recombination // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007221 // positive regulation of transcription of Notch receptor target // inferred from direct assay /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009912 // auditory receptor cell fate commitment // inferred from electronic annotation /// 0009957 // epidermal cell fate specification // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030279 // negative regulation of ossification // inferred from sequence or structural similarity /// 0030513 // positive regulation of BMP signaling pathway // inferred from sequence or structural similarity /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035912 // dorsal aorta morphogenesis // inferred from sequence or structural similarity /// 0036302 // atrioventricular canal development // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048505 // regulation of timing of cell differentiation // inferred from electronic annotation /// 0048733 // sebaceous gland development // inferred from electronic annotation /// 0048820 // hair follicle maturation // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from sequence or structural similarity /// 0060486 // Clara cell differentiation // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from sequence or structural similarity /// 0060844 // arterial endothelial cell fate commitment // inferred from electronic annotation /// 0061314 // Notch signaling involved in heart development // inferred by curator /// 0072554 // blood vessel lumenization // inferred from sequence or structural similarity /// 0072602 // interleukin-4 secretion // inferred from electronic annotation /// 0097101 // blood vessel endothelial cell fate specification // inferred from sequence or structural similarity /// 1901186 // positive regulation of ERBB signaling pathway // inferred from sequence or structural similarity /// 1901189 // positive regulation of ephrin receptor signaling pathway // inferred from sequence or structural similarity /// 2000138 // positive regulation of cell proliferation involved in heart morphogenesis // inferred from sequence or structural similarity </td> <td> 0002193 // MAML1-RBP-Jkappa- ICN1 complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000150 // recombinase activity // non-traceable author statement /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0000982 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0001228 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation </td> <td> -153.60 </td> <td> 314.00 </td> <td> -9.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209750_at </td> <td> 209750_at </td> <td> N32859 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N32859 /FEA=EST /DB_XREF=gi:1153258 /DB_XREF=est:yw88d02.s1 /CLONE=IMAGE:259299 /UG=Hs.37288 nuclear receptor subfamily 1, group D, member 2 /FL=gb:D16815.1 </td> <td> N32859 </td> <td> nuclear receptor subfamily 1, group D, member 2 </td> <td> NR1D2 </td> <td> 9975 </td> <td> NM_001145425 /// NM_005126 /// NR_110524 /// XM_005265639 /// XM_006713451 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0019216 // regulation of lipid metabolic process // inferred from sequence or structural similarity /// 0030522 // intracellular receptor signaling pathway // traceable author statement /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0048511 // rhythmic process // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from sequence or structural similarity /// 0055088 // lipid homeostasis // inferred from sequence or structural similarity /// 2000505 // regulation of energy homeostasis // inferred from sequence or structural similarity /// 2001014 // regulation of skeletal muscle cell differentiation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -106.88 </td> <td> 98.29 </td> <td> -9.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 217165_x_at </td> <td> 217165_x_at </td> <td> M10943 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:M10943 /DEF=Human metallothionein-If gene (hMT-If) /FEA=CDS /DB_XREF=gi:187540 /UG=Hs.203936 metallothionein 1F (functional) </td> <td> M10943 </td> <td> metallothionein 1F </td> <td> MT1F </td> <td> 4494 </td> <td> NM_005949 </td> <td> 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0071276 // cellular response to cadmium ion // inferred from expression pattern /// 0071294 // cellular response to zinc ion // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0005507 // copper ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046870 // cadmium ion binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -798.15 </td> <td> 1093.35 </td> <td> -9.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209604_s_at </td> <td> 209604_s_at </td> <td> BC003070 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003070.1 /DEF=Homo sapiens, GATA-binding protein 3, clone MGC:2346, mRNA, complete cds.  /FEA=mRNA /PROD=GATA-binding protein 3 /DB_XREF=gi:13111765 /UG=Hs.169946 GATA-binding protein 3 /FL=gb:BC003070.1 gb:M69106.1 gb:NM_002051.1 </td> <td> BC003070 </td> <td> GATA binding protein 3 </td> <td> GATA3 </td> <td> 2625 </td> <td> NM_001002295 /// NM_002051 /// XM_005252442 /// XM_005252443 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001709 // cell fate determination // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from electronic annotation /// 0001775 // cell activation // inferred from electronic annotation /// 0001806 // type IV hypersensitivity // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0001822 // kidney development // inferred from mutant phenotype /// 0001823 // mesonephros development // inferred from sequence or structural similarity /// 0002088 // lens development in camera-type eye // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002572 // pro-T cell differentiation // inferred from electronic annotation /// 0003180 // aortic valve morphogenesis // inferred from sequence or structural similarity /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006952 // defense response // traceable author statement /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008584 // male gonad development // inferred from sequence or structural similarity /// 0009615 // response to virus // inferred from expression pattern /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from mutant phenotype /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase signaling // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0031929 // TOR signaling // inferred from sequence or structural similarity /// 0032689 // negative regulation of interferon-gamma production // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from electronic annotation /// 0032736 // positive regulation of interleukin-13 production // inferred from electronic annotation /// 0032753 // positive regulation of interleukin-4 production // inferred from sequence or structural similarity /// 0032754 // positive regulation of interleukin-5 production // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033600 // negative regulation of mammary gland epithelial cell proliferation // inferred from direct assay /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0035457 // cellular response to interferon-alpha // inferred from expression pattern /// 0035799 // ureter maturation // inferred from electronic annotation /// 0035898 // parathyroid hormone secretion // inferred from electronic annotation /// 0042035 // regulation of cytokine biosynthetic process // inferred from sequence or structural similarity /// 0042421 // norepinephrine biosynthetic process // inferred from sequence or structural similarity /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043370 // regulation of CD4-positive, alpha-beta T cell differentiation // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043583 // ear development // inferred from mutant phenotype /// 0043627 // response to estrogen // inferred from expression pattern /// 0045061 // thymic T cell selection // inferred from electronic annotation /// 0045064 // T-helper 2 cell differentiation // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045582 // positive regulation of T cell differentiation // inferred from sequence or structural similarity /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from mutant phenotype /// 0045786 // negative regulation of cell cycle // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048469 // cell maturation // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from sequence or structural similarity /// 0048872 // homeostasis of number of cells // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from mutant phenotype /// 0050852 // T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0051569 // regulation of histone H3-K4 methylation // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from mutant phenotype /// 0060017 // parathyroid gland development // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from sequence or structural similarity /// 0060065 // uterus development // inferred from sequence or structural similarity /// 0060231 // mesenchymal to epithelial transition // inferred from direct assay /// 0060374 // mast cell differentiation // inferred from electronic annotation /// 0060676 // ureteric bud formation // inferred from sequence or structural similarity /// 0061085 // regulation of histone H3-K27 methylation // inferred from electronic annotation /// 0061290 // canonical Wnt signaling pathway involved in metanephric kidney development // inferred from sequence or structural similarity /// 0071345 // cellular response to cytokine stimulus // inferred from electronic annotation /// 0071353 // cellular response to interleukin-4 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0071599 // otic vesicle development // inferred from electronic annotation /// 0071773 // cellular response to BMP stimulus // inferred from electronic annotation /// 0072001 // renal system development // inferred from electronic annotation /// 0072107 // positive regulation of ureteric bud formation // inferred from sequence or structural similarity /// 0072178 // nephric duct morphogenesis // inferred from sequence or structural similarity /// 0072179 // nephric duct formation // inferred from sequence or structural similarity /// 0072182 // regulation of nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity /// 0072602 // interleukin-4 secretion // inferred from electronic annotation /// 0072643 // interferon-gamma secretion // inferred from electronic annotation /// 0072676 // lymphocyte migration // inferred from direct assay /// 2000114 // regulation of establishment of cell polarity // inferred from electronic annotation /// 2000146 // negative regulation of cell motility // inferred from mutant phenotype /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from mutant phenotype /// 2000607 // negative regulation of cell proliferation involved in mesonephros development // inferred from sequence or structural similarity /// 2000611 // positive regulation of thyroid hormone generation // inferred from mutant phenotype /// 2000664 // positive regulation of interleukin-5 secretion // inferred from direct assay /// 2000667 // positive regulation of interleukin-13 secretion // inferred from direct assay /// 2000667 // positive regulation of interleukin-13 secretion // inferred from mutant phenotype /// 2000679 // positive regulation of transcription regulatory region DNA binding // inferred from mutant phenotype /// 2000683 // regulation of cellular response to X-ray // inferred from mutant phenotype /// 2000703 // negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation // inferred from sequence or structural similarity /// 2000734 // negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation // inferred from sequence or structural similarity </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0001071 // nucleic acid binding transcription factor activity // inferred from direct assay /// 0001071 // nucleic acid binding transcription factor activity // inferred from mutant phenotype /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from mutant phenotype /// 0001158 // enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005134 // interleukin-2 receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from direct assay /// 0071837 // HMG box domain binding // inferred from physical interaction </td> <td> 140.05 </td> <td> 216.65 </td> <td> 9.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 41644_at </td> <td> 41644_at </td> <td> AB018333 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AB018333:Homo sapiens mRNA for KIAA0790 protein, partial cds /cds=(0,3961) /gb=AB018333 /gi=3882300 /ug=Hs.12002 /len=4469 </td> <td> AB018333 </td> <td> SAM and SH3 domain containing 1 </td> <td> SASH1 </td> <td> 23328 </td> <td> NM_015278 /// XM_005266874 /// XM_005266875 /// XM_006715406 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0031666 // positive regulation of lipopolysaccharide-mediated signaling pathway // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 1900044 // regulation of protein K63-linked ubiquitination // inferred from direct assay /// 1900745 // positive regulation of p38MAPK cascade // inferred from mutant phenotype /// 1901224 // positive regulation of NIK/NF-kappaB signaling // inferred from mutant phenotype /// 1902498 // regulation of protein autoubiquitination // inferred from direct assay </td> <td> 0043234 // protein complex // inferred from mutant phenotype </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from direct assay /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from direct assay /// 0032947 // protein complex scaffold // inferred from direct assay </td> <td> 130.27 </td> <td> 388.81 </td> <td> 9.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 217873_at </td> <td> 217873_at </td> <td> NM_016289 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016289.1 /DEF=Homo sapiens MO25 protein (LOC51719), mRNA. /FEA=mRNA /GEN=LOC51719 /PROD=MO25 protein /DB_XREF=gi:7706480 /UG=Hs.6406 MO25 protein /FL=gb:AF113536.1 gb:NM_016289.1 </td> <td> NM_016289 </td> <td> calcium binding protein 39 </td> <td> CAB39 </td> <td> 51719 </td> <td> NM_001130849 /// NM_001130850 /// NM_016289 </td> <td> 0007050 // cell cycle arrest // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0023014 // signal transduction by phosphorylation // inferred from direct assay /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0071476 // cellular hypotonic response // inferred by curator /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 1901017 // negative regulation of potassium ion transmembrane transporter activity // inferred by curator /// 1901380 // negative regulation of potassium ion transmembrane transport // inferred by curator /// 2000681 // negative regulation of rubidium ion transport // inferred by curator /// 2000687 // negative regulation of rubidium ion transmembrane transporter activity // inferred by curator </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from physical interaction /// 0030295 // protein kinase activator activity // inferred from direct assay /// 0043539 // protein serine/threonine kinase activator activity // inferred from direct assay </td> <td> -375.12 </td> <td> 525.16 </td> <td> -9.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218249_at </td> <td> 218249_at </td> <td> NM_022494 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022494.1 /DEF=Homo sapiens hypothetical protein FLJ21952 (FLJ21952), mRNA. /FEA=mRNA /GEN=FLJ21952 /PROD=hypothetical protein FLJ21952 /DB_XREF=gi:11968052 /UG=Hs.22353 hypothetical protein FLJ21952 /FL=gb:NM_022494.1 </td> <td> NM_022494 </td> <td> zinc finger, DHHC-type containing 6 </td> <td> ZDHHC6 </td> <td> 64429 </td> <td> NM_022494 /// XM_005270051 /// XM_005270052 /// XM_006717948 /// XM_006717949 </td> <td> 0018345 // protein palmitoylation // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016409 // palmitoyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019706 // protein-cysteine S-palmitoyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 104.20 </td> <td> 189.93 </td> <td> 9.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203420_at </td> <td> 203420_at </td> <td> NM_016255 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016255.1 /DEF=Homo sapiens Autosomal Highly Conserved Protein (AHCP), mRNA. /FEA=mRNA /GEN=AHCP /PROD=Autosomal Highly Conserved Protein /DB_XREF=gi:7705267 /UG=Hs.95260 Autosomal Highly Conserved Protein /FL=gb:AF097027.1 gb:NM_016255.1 </td> <td> NM_016255 </td> <td> family with sequence similarity 8, member A1 </td> <td> FAM8A1 </td> <td> 51439 </td> <td> NM_016255 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 120.00 </td> <td> 136.40 </td> <td> 9.43 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 220300_at </td> <td> 220300_at </td> <td> NM_017790 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017790.1 /DEF=Homo sapiens homolog of mouse C2PA (FLJ20370), mRNA. /FEA=mRNA /GEN=FLJ20370 /PROD=homolog of mouse C2PA /DB_XREF=gi:8923347 /UG=Hs.144840 homolog of mouse C2PA /FL=gb:NM_017790.1 </td> <td> NM_017790 </td> <td> regulator of G-protein signaling 3 </td> <td> RGS3 </td> <td> 5998 </td> <td> NM_001276260 /// NM_001276261 /// NM_001276262 /// NM_001282922 /// NM_001282923 /// NM_017790 /// NM_130795 /// NM_134427 /// NM_144488 /// NM_144489 /// XM_006717219 /// XM_006717220 /// XM_006717221 /// XM_006717222 /// XM_006717223 /// XM_006717224 /// XM_006717225 /// XM_006717226 /// XM_006717227 /// XM_006717228 /// XM_006717229 /// XM_006717230 </td> <td> 0000188 // inactivation of MAPK activity // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043547 // positive regulation of GTPase activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // not recorded /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -76.20 </td> <td> 111.33 </td> <td> -9.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 210538_s_at </td> <td> 210538_s_at </td> <td> U37546 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U37546.1 /DEF=Human IAP homolog C (MIHC) mRNA, complete cds. /FEA=mRNA /GEN=MIHC /PROD=MIHC /DB_XREF=gi:1145290 /UG=Hs.127799 baculoviral IAP repeat-containing 3 /FL=gb:U37546.1 </td> <td> U37546 </td> <td> baculoviral IAP repeat containing 3 </td> <td> BIRC3 </td> <td> 330 </td> <td> NM_001165 /// NM_182962 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0034121 // regulation of toll-like receptor signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038061 // NIK/NF-kappaB signaling // traceable author statement /// 0039535 // regulation of RIG-I signaling pathway // traceable author statement /// 0042326 // negative regulation of phosphorylation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045088 // regulation of innate immune response // traceable author statement /// 0050727 // regulation of inflammatory response // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0060544 // regulation of necroptotic process // inferred from mutant phenotype /// 0060546 // negative regulation of necroptotic process // inferred from electronic annotation /// 0070266 // necroptotic process // inferred from electronic annotation /// 0070424 // regulation of nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 2000116 // regulation of cysteine-type endopeptidase activity // traceable author statement /// 2000378 // negative regulation of reactive oxygen species metabolic process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -112.35 </td> <td> 64.15 </td> <td> -9.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201491_at </td> <td> 201491_at </td> <td> NM_012111 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012111.1 /DEF=Homo sapiens chromosome 14 open reading frame 3 (C14ORF3), mRNA. /FEA=mRNA /GEN=C14ORF3 /PROD=chromosome 14 open reading frame 3 /DB_XREF=gi:6912279 /UG=Hs.204041 chromosome 14 open reading frame 3 /FL=gb:BC000321.1 gb:NM_012111.1 gb:AF164791.1 </td> <td> NM_012111 </td> <td> AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast) </td> <td> AHSA1 </td> <td> 10598 </td> <td> NM_012111 </td> <td> 0006457 // protein folding // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0032781 // positive regulation of ATPase activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001671 // ATPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from direct assay </td> <td> 173.20 </td> <td> 336.75 </td> <td> 9.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 208977_x_at </td> <td> 208977_x_at </td> <td> BC004188 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004188.1 /DEF=Homo sapiens, tubulin, beta, 2, clone MGC:2826, mRNA, complete cds. /FEA=mRNA /PROD=tubulin, beta, 2 /DB_XREF=gi:13278848 /UG=Hs.251653 tubulin, beta, 2 /FL=gb:BC002783.1 gb:BC002885.1 gb:BC001911.1 gb:BC004188.1 gb:NM_006088.1 </td> <td> BC004188 </td> <td> tubulin, beta 4B class IVb </td> <td> TUBB4B </td> <td> 10383 </td> <td> NM_006088 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0042267 // natural killer cell mediated cytotoxicity // non-traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0042288 // MHC class I protein binding // traceable author statement /// 0051082 // unfolded protein binding // non-traceable author statement </td> <td> 565.02 </td> <td> 1229.41 </td> <td> 9.38 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203545_at </td> <td> 203545_at </td> <td> NM_024079 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024079.1 /DEF=Homo sapiens hypothetical protein MGC2840 similar to a putative glucosyltransferase (MGC2840), mRNA.  /FEA=mRNA /GEN=MGC2840 /PROD=hypothetical protein MGC2840 similar to aputative glucosyltransferase /DB_XREF=gi:13129069 /UG=Hs.155356 hypothetical protein MGC2840 similar to a putative glucosyltransferase /FL=gb:BC001133.1 gb:NM_024079.1 </td> <td> NM_024079 </td> <td> ALG8, alpha-1,3-glucosyltransferase </td> <td> ALG8 </td> <td> 79053 </td> <td> NM_001007027 /// NM_001007028 /// NM_024079 /// XM_005274247 /// XR_428923 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // inferred from mutant phenotype /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0097502 // mannosylation // inferred from mutant phenotype </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000033 // alpha-1,3-mannosyltransferase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation </td> <td> 87.60 </td> <td> 180.40 </td> <td> 9.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218723_s_at </td> <td> 218723_s_at </td> <td> NM_014059 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014059.1 /DEF=Homo sapiens RGC32 protein (RGC32), mRNA. /FEA=mRNA /GEN=RGC32 /PROD=RGC32 protein /DB_XREF=gi:7662650 /UG=Hs.76640 RGC32 protein /FL=gb:AF036549.1 gb:NM_014059.1 </td> <td> NM_014059 </td> <td> regulator of cell cycle </td> <td> RGCC </td> <td> 28984 </td> <td> NM_014059 </td> <td> 0001100 // negative regulation of exit from mitosis // inferred from direct assay /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0003331 // positive regulation of extracellular matrix constituent secretion // inferred from direct assay /// 0006956 // complement activation // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0031659 // positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle // inferred from direct assay /// 0032967 // positive regulation of collagen biosynthetic process // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from mutant phenotype /// 0050710 // negative regulation of cytokine secretion // inferred from mutant phenotype /// 0050715 // positive regulation of cytokine secretion // inferred from mutant phenotype /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0071158 // positive regulation of cell cycle arrest // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from mutant phenotype /// 0071850 // mitotic cell cycle arrest // inferred from direct assay /// 0072537 // fibroblast activation // inferred from sequence or structural similarity /// 0090272 // negative regulation of fibroblast growth factor production // inferred from direct assay /// 1901313 // positive regulation of gene expression involved in extracellular matrix organization // inferred from direct assay /// 1901991 // negative regulation of mitotic cell cycle phase transition // inferred from direct assay /// 2000048 // negative regulation of cell-cell adhesion mediated by cadherin // inferred from direct assay /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from direct assay /// 2000573 // positive regulation of DNA biosynthetic process // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0030295 // protein kinase activator activity // inferred from direct assay /// 0070412 // R-SMAD binding // inferred from physical interaction </td> <td> 226.22 </td> <td> 304.69 </td> <td> 9.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201919_at </td> <td> 201919_at </td> <td> AL049246 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049246.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564C053 (from clone DKFZp564C053). /FEA=mRNA /DB_XREF=gi:4499983 /UG=Hs.42484 hypothetical protein FLJ10618 /FL=gb:NM_018155.1 </td> <td> AL049246 </td> <td> solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 </td> <td> SLC25A36 </td> <td> 55186 </td> <td> NM_001104647 /// NM_018155 /// XM_005247575 /// XM_006713685 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -190.00 </td> <td> 355.98 </td> <td> -9.32 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 210512_s_at </td> <td> 210512_s_at </td> <td> AF022375 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF022375.1 /DEF=Homo sapiens vascular endothelial growth factor mRNA, complete cds. /FEA=mRNA /PROD=vascular endothelial growth factor /DB_XREF=gi:3719220 /UG=Hs.73793 vascular endothelial growth factor /FL=gb:M32977.1 gb:AF022375.1 gb:NM_003376.1 gb:AB021221.1 gb:AF091352.1 </td> <td> AF022375 </td> <td> vascular endothelial growth factor A </td> <td> VEGFA </td> <td> 7422 </td> <td> NM_001025366 /// NM_001025367 /// NM_001025368 /// NM_001025369 /// NM_001025370 /// NM_001033756 /// NM_001171622 /// NM_001171623 /// NM_001171624 /// NM_001171625 /// NM_001171626 /// NM_001171627 /// NM_001171628 /// NM_001171629 /// NM_001171630 /// NM_001204384 /// NM_001204385 /// NM_001287044 /// NM_003376 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001525 // angiogenesis // inferred from direct assay /// 0001541 // ovarian follicle development // inferred from sequence or structural similarity /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // traceable author statement /// 0001666 // response to hypoxia // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from sequence or structural similarity /// 0001944 // vasculature development // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0002052 // positive regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0002575 // basophil chemotaxis // inferred from direct assay /// 0002576 // platelet degranulation // traceable author statement /// 0002687 // positive regulation of leukocyte migration // traceable author statement /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003169 // coronary vein morphogenesis // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007498 // mesoderm development // inferred from sequence or structural similarity /// 0007595 // lactation // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008360 // regulation of cell shape // inferred from direct assay /// 0009409 // response to cold // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030212 // hyaluronan metabolic process // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from direct assay /// 0030225 // macrophage differentiation // inferred from direct assay /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030855 // epithelial cell differentiation // inferred from sequence or structural similarity /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0031077 // post-embryonic camera-type eye development // inferred from sequence or structural similarity /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032147 // activation of protein kinase activity // inferred from direct assay /// 0032793 // positive regulation of CREB transcription factor activity // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0035148 // tube formation // inferred from direct assay /// 0035767 // endothelial cell chemotaxis // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0036303 // lymph vessel morphogenesis // inferred from sequence or structural similarity /// 0038033 // positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from direct assay /// 0038091 // positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway // inferred from direct assay /// 0038190 // VEGF-activated neuropilin signaling pathway // inferred from sequence or structural similarity /// 0040007 // growth // inferred from sequence or structural similarity /// 0042088 // T-helper 1 type immune response // inferred from electronic annotation /// 0042462 // eye photoreceptor cell development // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043069 // negative regulation of programmed cell death // inferred from electronic annotation /// 0043117 // positive regulation of vascular permeability // inferred from direct assay /// 0043129 // surfactant homeostasis // inferred from sequence or structural similarity /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045779 // negative regulation of bone resorption // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048469 // cell maturation // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048739 // cardiac muscle fiber development // inferred from sequence or structural similarity /// 0048754 // branching morphogenesis of an epithelial tube // inferred from sequence or structural similarity /// 0048842 // positive regulation of axon extension involved in axon guidance // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050918 // positive chemotaxis // inferred from direct assay /// 0050927 // positive regulation of positive chemotaxis // inferred from direct assay /// 0050930 // induction of positive chemotaxis // inferred from direct assay /// 0050930 // induction of positive chemotaxis // non-traceable author statement /// 0051272 // positive regulation of cellular component movement // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0060319 // primitive erythrocyte differentiation // inferred from sequence or structural similarity /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from sequence or structural similarity /// 0060754 // positive regulation of mast cell chemotaxis // inferred from direct assay /// 0060948 // cardiac vascular smooth muscle cell development // inferred from sequence or structural similarity /// 0060982 // coronary artery morphogenesis // inferred from sequence or structural similarity /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0061419 // positive regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071456 // cellular response to hypoxia // traceable author statement /// 0071542 // dopaminergic neuron differentiation // inferred from sequence or structural similarity /// 0071679 // commissural neuron axon guidance // inferred from sequence or structural similarity /// 0090037 // positive regulation of protein kinase C signaling // inferred from direct assay /// 0090050 // positive regulation of cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0090259 // regulation of retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 1900086 // positive regulation of peptidyl-tyrosine autophosphorylation // inferred from direct assay /// 1900745 // positive regulation of p38MAPK cascade // inferred from direct assay /// 1901492 // positive regulation of lymphangiogenesis // inferred from electronic annotation /// 1901727 // positive regulation of histone deacetylase activity // inferred from direct assay /// 1902336 // positive regulation of retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 1902533 // positive regulation of intracellular signal transduction // inferred from direct assay /// 1902966 // positive regulation of protein localization to early endosome // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation </td> <td> 0001968 // fibronectin binding // inferred from direct assay /// 0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005172 // vascular endothelial growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from sequence or structural similarity /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from mutant phenotype /// 0038191 // neuropilin binding // inferred from physical interaction /// 0042056 // chemoattractant activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0043183 // vascular endothelial growth factor receptor 1 binding // inferred from physical interaction /// 0043184 // vascular endothelial growth factor receptor 2 binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0048018 // receptor agonist activity // inferred from physical interaction /// 0050840 // extracellular matrix binding // inferred by curator </td> <td> -302.50 </td> <td> 175.85 </td> <td> -9.30 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 221786_at </td> <td> 221786_at </td> <td> BF197222 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF197222 /FEA=EST /DB_XREF=gi:11085906 /DB_XREF=est:7m88b07.x1 /CLONE=IMAGE:3561949 /UG=Hs.12342 Homo sapiens clone 24538 mRNA sequence </td> <td> BF197222 </td> <td> chromosome 6 open reading frame 120 </td> <td> C6orf120 </td> <td> 387263 </td> <td> NM_001029863 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> 99.20 </td> <td> 118.83 </td> <td> 9.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 211559_s_at </td> <td> 211559_s_at </td> <td> L49506 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L49506.1 /DEF=Homo sapiens cyclin G2 mRNA, complete cds. /FEA=mRNA /PROD=cyclin G2 /DB_XREF=gi:1236234 /UG=Hs.79069 cyclin G2 /FL=gb:L49506.1 </td> <td> L49506 </td> <td> cyclin G2 </td> <td> CCNG2 </td> <td> 901 </td> <td> NM_004354 </td> <td> 0000075 // cell cycle checkpoint // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td>  </td> <td> -164.02 </td> <td> 145.21 </td> <td> -9.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 210616_s_at </td> <td> 210616_s_at </td> <td> AB020712 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB020712.1 /DEF=Homo sapiens mRNA for KIAA0905 protein, complete cds. /FEA=mRNA /GEN=KIAA0905 /PROD=KIAA0905 protein /DB_XREF=gi:4240298 /UG=Hs.70266 yeast Sec31p homolog /FL=gb:AB020712.1 </td> <td> AB020712 </td> <td> SEC31 homolog A (S. cerevisiae) </td> <td> SEC31A </td> <td> 22872 </td> <td> NM_001077206 /// NM_001077207 /// NM_001077208 /// NM_001191049 /// NM_014933 /// NM_016211 /// XM_005262847 /// XM_005262849 /// XM_005262850 /// XM_005262851 /// XM_005262852 /// XM_005262854 /// XM_006714141 /// XM_006714142 /// XM_006714143 /// XM_006714144 /// XM_006714145 /// XM_006714146 /// XM_006714147 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0051592 // response to calcium ion // inferred from direct assay /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030120 // vesicle coat // inferred from direct assay /// 0030127 // COPII vesicle coat // non-traceable author statement /// 0030134 // ER to Golgi transport vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> 107.75 </td> <td> 533.73 </td> <td> 9.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 204298_s_at </td> <td> 204298_s_at </td> <td> NM_002317 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002317.1 /DEF=Homo sapiens lysyl oxidase (LOX), mRNA. /FEA=mRNA /GEN=LOX /PROD=lysyl oxidase /DB_XREF=gi:4505008 /UG=Hs.102267 lysyl oxidase /FL=gb:M94054.1 gb:AF039291.1 gb:NM_002317.1 </td> <td> NM_002317 </td> <td> lysyl oxidase </td> <td> LOX </td> <td> 4015 </td> <td> NM_001178102 /// NM_002317 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0048251 // elastic fiber assembly // inferred from electronic annotation /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0004720 // protein-lysine 6-oxidase activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016641 // oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -208.60 </td> <td> 228.62 </td> <td> -9.27 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 220450_at </td> <td> 220450_at </td> <td> NM_024914 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024914.1 /DEF=Homo sapiens hypothetical protein FLJ13262 (FLJ13262), mRNA. /FEA=mRNA /GEN=FLJ13262 /PROD=hypothetical protein FLJ13262 /DB_XREF=gi:13376379 /UG=Hs.255858 hypothetical protein FLJ13262 /FL=gb:NM_024914.1 </td> <td> NM_024914 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 87.67 </td> <td> 71.51 </td> <td> 9.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200958_s_at </td> <td> 200958_s_at </td> <td> NM_005625 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005625.1 /DEF=Homo sapiens syndecan binding protein (syntenin) (SDCBP), mRNA. /FEA=mRNA /GEN=SDCBP /PROD=syndecan binding protein (syntenin) /DB_XREF=gi:5032082 /UG=Hs.8180 syndecan binding protein (syntenin) /FL=gb:AF000652.1 gb:NM_005625.1 </td> <td> NM_005625 </td> <td> syndecan binding protein (syntenin) </td> <td> SDCBP </td> <td> 6386 </td> <td> NM_001007067 /// NM_001007068 /// NM_001007069 /// NM_001007070 /// NM_005625 /// XM_005251280 </td> <td> 0006612 // protein targeting to membrane // non-traceable author statement /// 0006930 // substrate-dependent cell migration, cell extension // non-traceable author statement /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0007268 // synaptic transmission // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred by curator </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // non-traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005895 // interleukin-5 receptor complex // inferred from sequence or structural similarity /// 0005912 // adherens junction // non-traceable author statement /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0001948 // glycoprotein binding // inferred from electronic annotation /// 0005109 // frizzled binding // inferred from physical interaction /// 0005137 // interleukin-5 receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // non-traceable author statement /// 0019838 // growth factor binding // inferred from electronic annotation /// 0042043 // neurexin family protein binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0045545 // syndecan binding // inferred from physical interaction /// 0045545 // syndecan binding // non-traceable author statement /// 0046875 // ephrin receptor binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation </td> <td> -595.70 </td> <td> 1400.12 </td> <td> -9.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 214175_x_at </td> <td> 214175_x_at </td> <td> AI254547 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI254547 /FEA=EST /DB_XREF=gi:3862072 /DB_XREF=est:qv48h06.x1 /CLONE=IMAGE:1984859 /UG=Hs.79691 LIM domain protein </td> <td> AI254547 </td> <td> PDZ and LIM domain 4 </td> <td> PDLIM4 </td> <td> 8572 </td> <td> NM_001131027 /// NM_003687 /// XM_006714723 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -187.05 </td> <td> 275.62 </td> <td> -9.20 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200754_x_at </td> <td> 200754_x_at </td> <td> NM_003016 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003016.1 /DEF=Homo sapiens splicing factor, arginineserine-rich 2 (SFRS2), mRNA. /FEA=mRNA /GEN=SFRS2 /PROD=splicing factor, arginineserine-rich 2 /DB_XREF=gi:4506898 /UG=Hs.73965 splicing factor, arginineserine-rich 2 /FL=gb:BC000339.1 gb:BC001303.1 gb:M90104.1 gb:NM_003016.1 </td> <td> NM_003016 </td> <td> microRNA 636 /// serine/arginine-rich splicing factor 2 </td> <td> MIR636 /// SRSF2 </td> <td> 6427 /// 693221 </td> <td> NM_001195427 /// NM_003016 /// NR_030366 /// NR_036608 /// XR_429913 /// XR_429914 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 2001141 // regulation of RNA biosynthetic process // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0016605 // PML body // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 539.27 </td> <td> 1251.46 </td> <td> 9.19 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218066_at </td> <td> 218066_at </td> <td> NM_006598 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006598.1 /DEF=Homo sapiens solute carrier family 12 (potassiumchloride transporters), member 7 (SLC12A7), mRNA.  /FEA=mRNA /GEN=SLC12A7 /PROD=solute carrier family 12 (potassiumchloridetransporters), member 7 /DB_XREF=gi:5730042 /UG=Hs.172613 solute carrier family 12 (potassiumchloride transporters), member 7 /FL=gb:AF105365.1 gb:NM_006598.1 </td> <td> NM_006598 </td> <td> solute carrier family 12 (potassium/chloride transporter), member 7 </td> <td> SLC12A7 </td> <td> 10723 </td> <td> NM_006598 /// XM_005248231 /// XM_006725006 </td> <td> 0006810 // transport // traceable author statement /// 0006811 // ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006821 // chloride transport // traceable author statement /// 0006884 // cell volume homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 1902476 // chloride transmembrane transport // inferred from electronic annotation /// 1902476 // chloride transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0015293 // symporter activity // inferred from electronic annotation /// 0015377 // cation:chloride symporter activity // inferred from electronic annotation /// 0015379 // potassium:chloride symporter activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> -242.65 </td> <td> 361.82 </td> <td> -9.18 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200748_s_at </td> <td> 200748_s_at </td> <td> NM_002032 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002032.1 /DEF=Homo sapiens ferritin, heavy polypeptide 1 (FTH1), mRNA. /FEA=mRNA /GEN=FTH1 /PROD=ferritin, heavy polypeptide 1 /DB_XREF=gi:4503794 /UG=Hs.62954 ferritin, heavy polypeptide 1 /FL=gb:BC000857.1 gb:BC001399.1 gb:M11146.1 gb:M12937.1 gb:M97164.1 gb:NM_002032.1 gb:L20941.1 </td> <td> NM_002032 </td> <td> ferritin, heavy polypeptide 1 </td> <td> FTH1 </td> <td> 2495 </td> <td> NM_002032 </td> <td> 0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006880 // intracellular sequestering of iron ion // inferred from direct assay /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006955 // immune response // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0048147 // negative regulation of fibroblast proliferation // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0008043 // intracellular ferritin complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004322 // ferroxidase activity // inferred from electronic annotation /// 0005506 // iron ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation </td> <td> -2106.23 </td> <td> 2540.96 </td> <td> -9.17 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200945_s_at </td> <td> 200945_s_at </td> <td> NM_014933 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014933.1 /DEF=Homo sapiens yeast Sec31p homolog (KIAA0905), mRNA. /FEA=mRNA /GEN=KIAA0905 /PROD=yeast Sec31p homolog /DB_XREF=gi:7662369 /UG=Hs.70266 yeast Sec31p homolog /FL=gb:AB018359.1 gb:NM_014933.1 gb:AF139184.1 </td> <td> NM_014933 </td> <td> SEC31 homolog A (S. cerevisiae) </td> <td> SEC31A </td> <td> 22872 </td> <td> NM_001077206 /// NM_001077207 /// NM_001077208 /// NM_001191049 /// NM_014933 /// NM_016211 /// XM_005262847 /// XM_005262849 /// XM_005262850 /// XM_005262851 /// XM_005262852 /// XM_005262854 /// XM_006714141 /// XM_006714142 /// XM_006714143 /// XM_006714144 /// XM_006714145 /// XM_006714146 /// XM_006714147 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0051592 // response to calcium ion // inferred from direct assay /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030120 // vesicle coat // inferred from direct assay /// 0030127 // COPII vesicle coat // non-traceable author statement /// 0030134 // ER to Golgi transport vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> 233.03 </td> <td> 966.49 </td> <td> 9.16 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 219449_s_at </td> <td> 219449_s_at </td> <td> NM_017866 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017866.1 /DEF=Homo sapiens hypothetical protein FLJ20533 (FLJ20533), mRNA. /FEA=mRNA /GEN=FLJ20533 /PROD=hypothetical protein FLJ20533 /DB_XREF=gi:8923499 /UG=Hs.106650 hypothetical protein FLJ20533 /FL=gb:BC002748.1 gb:NM_017866.1 </td> <td> NM_017866 </td> <td> transmembrane protein 70 </td> <td> TMEM70 </td> <td> 54968 </td> <td> NM_001040613 /// NM_017866 /// NR_033334 </td> <td> 0033615 // mitochondrial proton-transporting ATP synthase complex assembly // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032592 // integral component of mitochondrial membrane // inferred from direct assay </td> <td>  </td> <td> 119.50 </td> <td> 201.93 </td> <td> 9.14 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202540_s_at </td> <td> 202540_s_at </td> <td> NM_000859 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000859.1 /DEF=Homo sapiens 3-hydroxy-3-methylglutaryl-Coenzyme A reductase (HMGCR), mRNA.  /FEA=mRNA /GEN=HMGCR /PROD=3-hydroxy-3-methylglutaryl-Coenzyme A reductase /DB_XREF=gi:4557642 /UG=Hs.11899 3-hydroxy-3-methylglutaryl-Coenzyme A reductase /FL=gb:M11058.1 gb:NM_000859.1 </td> <td> NM_000859 </td> <td> 3-hydroxy-3-methylglutaryl-CoA reductase </td> <td> HMGCR </td> <td> 3156 </td> <td> NM_000859 /// NM_001130996 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006743 // ubiquinone metabolic process // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010664 // negative regulation of striated muscle cell apoptotic process // inferred from electronic annotation /// 0010666 // positive regulation of cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0015936 // coenzyme A metabolic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045445 // myoblast differentiation // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045908 // negative regulation of vasodilation // inferred from electronic annotation /// 0048643 // positive regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061045 // negative regulation of wound healing // inferred from electronic annotation /// 0061179 // negative regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation </td> <td> 0005778 // peroxisomal membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004420 // hydroxymethylglutaryl-CoA reductase (NADPH) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008158 // hedgehog receptor activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0042282 // hydroxymethylglutaryl-CoA reductase activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from direct assay /// 0070402 // NADPH binding // inferred from direct assay </td> <td> 86.05 </td> <td> 65.78 </td> <td> 9.12 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218646_at </td> <td> 218646_at </td> <td> NM_017867 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017867.1 /DEF=Homo sapiens hypothetical protein FLJ20534 (FLJ20534), mRNA. /FEA=mRNA /GEN=FLJ20534 /PROD=hypothetical protein FLJ20534 /DB_XREF=gi:8923502 /UG=Hs.44344 hypothetical protein FLJ20534 /FL=gb:AL136673.1 gb:NM_017867.1 </td> <td> NM_017867 </td> <td> chromosome 4 open reading frame 27 </td> <td> C4orf27 </td> <td> 54969 </td> <td> NM_017867 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td>  </td> <td> 101.18 </td> <td> 162.54 </td> <td> 9.11 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203640_at </td> <td> 203640_at </td> <td> BE328496 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE328496 /FEA=EST /DB_XREF=gi:9202272 /DB_XREF=est:hs98f09.x1 /CLONE=IMAGE:3145289 /UG=Hs.283609 hypothetical protein PRO2032 /FL=gb:AF116683.1 gb:NM_018615.1 </td> <td> BE328496 </td> <td> muscleblind-like splicing regulator 2 </td> <td> MBNL2 </td> <td> 10150 </td> <td> NM_144778 /// NM_207304 /// XM_005254018 /// XM_005254019 /// XM_005254020 /// XM_005254021 /// XM_005254022 /// XM_006719912 </td> <td> 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -397.97 </td> <td> 442.79 </td> <td> -9.11 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 221577_x_at </td> <td> 221577_x_at </td> <td> AF003934 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF003934.1 /DEF=Homo sapiens prostate differentiation factor mRNA, complete cds. /FEA=mRNA /PROD=prostate differentiation factor /DB_XREF=gi:2290971 /UG=Hs.296638 prostate differentiation factor /FL=gb:BC000529.1 gb:AB000584.1 gb:U88323.1 gb:AF003934.1 gb:AF019770.1 gb:NM_004864.1 </td> <td> AF003934 </td> <td> growth differentiation factor 15 </td> <td> GDF15 </td> <td> 9518 </td> <td> NM_004864 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation </td> <td> -787.70 </td> <td> 835.95 </td> <td> -9.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202200_s_at </td> <td> 202200_s_at </td> <td> NM_003137 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003137.1 /DEF=Homo sapiens SFRS protein kinase 1 (SRPK1), mRNA. /FEA=mRNA /GEN=SRPK1 /PROD=SFRS protein kinase 1 /DB_XREF=gi:4507218 /UG=Hs.75761 SFRS protein kinase 1 /FL=gb:NM_003137.1 gb:U09564.1 </td> <td> NM_003137 </td> <td> SRSF protein kinase 1 </td> <td> SRPK1 </td> <td> 6732 </td> <td> NM_003137 /// NR_034069 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007059 // chromosome segregation // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035092 // sperm chromatin condensation // traceable author statement /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0045070 // positive regulation of viral genome replication // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // inferred by curator /// 0048024 // regulation of mRNA splicing, via spliceosome // traceable author statement /// 0050684 // regulation of mRNA processing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 110.00 </td> <td> 200.35 </td> <td> 9.08 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201250_s_at </td> <td> 201250_s_at </td> <td> NM_006516 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006516.1 /DEF=Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 1 (SLC2A1), mRNA.  /FEA=mRNA /GEN=SLC2A1 /PROD=solute carrier family 2 (facilitated glucosetransporter), member 1 /DB_XREF=gi:5730050 /UG=Hs.169902 solute carrier family 2 (facilitated glucose transporter), member 1 /FL=gb:K03195.1 gb:NM_006516.1 </td> <td> NM_006516 </td> <td> solute carrier family 2 (facilitated glucose transporter), member 1 </td> <td> SLC2A1 </td> <td> 6513 </td> <td> NM_006516 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006461 // protein complex assembly // inferred from direct assay /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0042908 // xenobiotic transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0070837 // dehydroascorbic acid transport // inferred from electronic annotation </td> <td> 0001939 // female pronucleus // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005901 // caveola // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030864 // cortical actin cytoskeleton // inferred from direct assay /// 0031982 // vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation /// 0033300 // dehydroascorbic acid transporter activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042910 // xenobiotic transporter activity // inferred from electronic annotation /// 0043621 // protein self-association // inferred from direct assay /// 0055056 // D-glucose transmembrane transporter activity // inferred from electronic annotation </td> <td> -226.42 </td> <td> 301.49 </td> <td> -9.07 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209501_at </td> <td> 209501_at </td> <td> AL582414 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL582414 /FEA=EST /DB_XREF=gi:12950373 /DB_XREF=est:AL582414 /CLONE=CS0DL001YM17 (3 prime) /UG=Hs.75124 cerebellar degeneration-related protein (62kD) /FL=gb:D12981.1 </td> <td> AL582414 </td> <td> cerebellar degeneration-related protein 2, 62kDa /// cerebellar degeneration-related protein 2-like </td> <td> CDR2 /// LOC101060399 </td> <td> 1039 /// 101060399 </td> <td> NM_001802 /// XM_005276502 </td> <td>  </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 115.85 </td> <td> 225.82 </td> <td> 9.06 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209101_at </td> <td> 209101_at </td> <td> M92934 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M92934.1 /DEF=Human connective tissue growth factor, complete cds. /FEA=mRNA /PROD=connective tissue growth factor /DB_XREF=gi:180923 /UG=Hs.75511 connective tissue growth factor /FL=gb:M92934.1 gb:NM_001901.1 </td> <td> M92934 </td> <td> connective tissue growth factor </td> <td> CTGF </td> <td> 1490 </td> <td> NM_001901 </td> <td> 0001502 // cartilage condensation // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001558 // regulation of cell growth // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0009611 // response to wounding // traceable author statement /// 0009749 // response to glucose // inferred from electronic annotation /// 0010260 // organ senescence // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0032330 // regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from electronic annotation /// 0034059 // response to anoxia // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035988 // chondrocyte proliferation // inferred from electronic annotation /// 0043200 // response to amino acid // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045597 // positive regulation of cell differentiation // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0050867 // positive regulation of cell activation // inferred from electronic annotation /// 0051385 // response to mineralocorticoid // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay /// 0060401 // cytosolic calcium ion transport // inferred from electronic annotation /// 0060452 // positive regulation of cardiac muscle contraction // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0070278 // extracellular matrix constituent secretion // inferred from electronic annotation /// 0070318 // positive regulation of G0 to G1 transition // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070542 // response to fatty acid // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005801 // cis-Golgi network // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0001968 // fibronectin binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation </td> <td> 1079.40 </td> <td> 2803.30 </td> <td> 9.04 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203432_at </td> <td> 203432_at </td> <td> AW272611 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW272611 /FEA=EST /DB_XREF=gi:6659725 /DB_XREF=est:xu22h03.x1 /CLONE=IMAGE:2800949 /UG=Hs.11355 thymopoietin /FL=gb:NM_003276.1 gb:U09086.1 </td> <td> AW272611 </td> <td> thymopoietin </td> <td> TMPO </td> <td> 7112 </td> <td> NM_001032283 /// NM_001032284 /// NM_003276 /// XM_005269130 /// XM_005269132 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005635 // nuclear envelope // traceable author statement /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // traceable author statement </td> <td> 128.48 </td> <td> 120.51 </td> <td> 9.03 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 208813_at </td> <td> 208813_at </td> <td> BC000498 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000498.1 /DEF=Homo sapiens, glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1), clone MGC:8411, mRNA, complete cds.  /FEA=mRNA /PROD=glutamic-oxaloacetic transaminase 1, soluble(aspartate aminotransferase 1) /DB_XREF=gi:12653452 /UG=Hs.597 glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) /FL=gb:BC000498.1 gb:M37400.1 gb:NM_002079.1 </td> <td> BC000498 </td> <td> glutamic-oxaloacetic transaminase 1, soluble </td> <td> GOT1 </td> <td> 2805 </td> <td> NM_002079 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006103 // 2-oxoglutarate metabolic process // inferred from sequence or structural similarity /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0006114 // glycerol biosynthetic process // inferred from sequence or structural similarity /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006531 // aspartate metabolic process // inferred from sequence or structural similarity /// 0006532 // aspartate biosynthetic process // inferred from electronic annotation /// 0006533 // aspartate catabolic process // inferred from direct assay /// 0006536 // glutamate metabolic process // inferred from sequence or structural similarity /// 0006595 // polyamine metabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // traceable author statement /// 0019550 // glutamate catabolic process to aspartate // inferred from electronic annotation /// 0019551 // glutamate catabolic process to 2-oxoglutarate // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from expression pattern /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043648 // dicarboxylic acid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051384 // response to glucocorticoid // inferred from expression pattern /// 0055089 // fatty acid homeostasis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043679 // axon terminus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from direct assay /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from sequence or structural similarity /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // traceable author statement /// 0004609 // phosphatidylserine decarboxylase activity // inferred from electronic annotation /// 0008483 // transaminase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0031406 // carboxylic acid binding // inferred from electronic annotation /// 0047801 // L-cysteine:2-oxoglutarate aminotransferase activity // inferred from sequence or structural similarity /// 0080130 // L-phenylalanine:2-oxoglutarate aminotransferase activity // inferred from electronic annotation </td> <td> -118.27 </td> <td> 152.31 </td> <td> -9.02 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 205207_at </td> <td> 205207_at </td> <td> NM_000600 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000600.1 /DEF=Homo sapiens interleukin 6 (interferon, beta 2) (IL6), mRNA. /FEA=mRNA /GEN=IL6 /PROD=interleukin 6 (interferon, beta 2) /DB_XREF=gi:10834983 /UG=Hs.93913 interleukin 6 (interferon, beta 2) /FL=gb:NM_000600.1 gb:M14584.1 gb:M18403.1 gb:M29150.1 gb:M54894.1 </td> <td> NM_000600 </td> <td> interleukin 6 </td> <td> IL6 </td> <td> 3569 </td> <td> NM_000600 /// XM_005249745 </td> <td> 0001781 // neutrophil apoptotic process // inferred from direct assay /// 0002384 // hepatic immune response // inferred from direct assay /// 0002384 // hepatic immune response // traceable author statement /// 0002446 // neutrophil mediated immunity // inferred by curator /// 0002548 // monocyte chemotaxis // inferred by curator /// 0002675 // positive regulation of acute inflammatory response // inferred from direct assay /// 0002690 // positive regulation of leukocyte chemotaxis // inferred by curator /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006953 // acute-phase response // traceable author statement /// 0006954 // inflammatory response // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0006959 // humoral immune response // inferred by curator /// 0007568 // aging // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0010574 // regulation of vascular endothelial growth factor production // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010888 // negative regulation of lipid storage // non-traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032494 // response to peptidoglycan // inferred from expression pattern /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032722 // positive regulation of chemokine production // inferred from direct assay /// 0032722 // positive regulation of chemokine production // inferred from mutant phenotype /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032868 // response to insulin // inferred from electronic annotation /// 0032966 // negative regulation of collagen biosynthetic process // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042110 // T cell activation // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043200 // response to amino acid // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0045079 // negative regulation of chemokine biosynthetic process // inferred from sequence or structural similarity /// 0045188 // regulation of circadian sleep/wake cycle, non-REM sleep // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // non-traceable author statement /// 0045630 // positive regulation of T-helper 2 cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // traceable author statement /// 0045721 // negative regulation of gluconeogenesis // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred by curator /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046427 // positive regulation of JAK-STAT cascade // inferred from direct assay /// 0046677 // response to antibiotic // inferred from electronic annotation /// 0046716 // muscle cell cellular homeostasis // inferred from electronic annotation /// 0046849 // bone remodeling // inferred from electronic annotation /// 0046888 // negative regulation of hormone secretion // inferred from electronic annotation /// 0048635 // negative regulation of muscle organ development // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050710 // negative regulation of cytokine secretion // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050829 // defense response to Gram-negative bacterium // inferred from expression pattern /// 0050830 // defense response to Gram-positive bacterium // inferred from expression pattern /// 0050871 // positive regulation of B cell activation // inferred from direct assay /// 0051024 // positive regulation of immunoglobulin secretion // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051384 // response to glucocorticoid // inferred from direct assay /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0051971 // positive regulation of transmission of nerve impulse // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from electronic annotation /// 0070091 // glucagon secretion // inferred from sequence or structural similarity /// 0070102 // interleukin-6-mediated signaling pathway // inferred from direct assay /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 0072540 // T-helper 17 cell lineage commitment // inferred from sequence or structural similarity /// 1901215 // negative regulation of neuron death // inferred from electronic annotation /// 2000366 // positive regulation of STAT protein import into nucleus // inferred by curator /// 2000676 // positive regulation of type B pancreatic cell apoptotic process // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005896 // interleukin-6 receptor complex // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation </td> <td> 0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // non-traceable author statement /// 0005138 // interleukin-6 receptor binding // inferred from physical interaction /// 0005138 // interleukin-6 receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay </td> <td> -1309.88 </td> <td> 738.66 </td> <td> -9.01 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 205133_s_at </td> <td> 205133_s_at </td> <td> NM_002157 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002157.1 /DEF=Homo sapiens heat shock 10kD protein 1 (chaperonin 10) (HSPE1), mRNA.  /FEA=mRNA /GEN=HSPE1 /PROD=heat shock 10kD protein 1 (chaperonin 10) /DB_XREF=gi:4504522 /UG=Hs.1197 heat shock 10kD protein 1 (chaperonin 10) /FL=gb:NM_002157.1 gb:U07550.1 </td> <td> NM_002157 </td> <td> heat shock 10kDa protein 1 </td> <td> HSPE1 </td> <td> 3336 </td> <td> NM_002157 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement /// 0051087 // chaperone binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from sequence or structural similarity </td> <td> 305.37 </td> <td> 407.91 </td> <td> 9.00 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202237_at </td> <td> 202237_at </td> <td> NM_006169 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006169.1 /DEF=Homo sapiens nicotinamide N-methyltransferase (NNMT), mRNA. /FEA=mRNA /GEN=NNMT /PROD=nicotinamide N-methyltransferase /DB_XREF=gi:5453789 /UG=Hs.76669 nicotinamide N-methyltransferase /FL=gb:BC000234.1 gb:U08021.1 gb:NM_006169.1 </td> <td> NM_006169 </td> <td> uncharacterized LOC101928916 /// nicotinamide N-methyltransferase </td> <td> LOC101928916 /// NNMT </td> <td> 4837 /// 101928916 </td> <td> NM_006169 /// XR_246479 /// XR_247717 /// XR_252975 </td> <td> 0006805 // xenobiotic metabolic process // traceable author statement /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032259 // methylation // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0008112 // nicotinamide N-methyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -533.72 </td> <td> 720.81 </td> <td> -9.00 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212714_at </td> <td> 212714_at </td> <td> AL050205 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL050205.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586F1323 (from clone DKFZp586F1323). /FEA=mRNA /DB_XREF=gi:4884444 /UG=Hs.26613 Homo sapiens mRNA; cDNA DKFZp586F1323 (from clone DKFZp586F1323) </td> <td> AL050205 </td> <td> La ribonucleoprotein domain family, member 4 </td> <td> LARP4 </td> <td> 113251 </td> <td> NM_001170803 /// NM_001170804 /// NM_001170808 /// NM_052879 /// NM_199188 /// NM_199190 /// NR_033200 /// XM_005268613 /// XM_006719215 /// XM_006719216 </td> <td> 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype </td> <td> 0016020 // membrane // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 134.60 </td> <td> 168.88 </td> <td> 9.00 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 202364_at </td> <td> 202364_at </td> <td> NM_005962 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005962.1 /DEF=Homo sapiens MAX-interacting protein 1 (MXI1), mRNA. /FEA=mRNA /GEN=MXI1 /PROD=MAX-interacting protein 1 /DB_XREF=gi:5174596 /UG=Hs.118630 MAX-interacting protein 1 /FL=gb:L07648.1 gb:NM_005962.1 gb:D63940.1 </td> <td> NM_005962 </td> <td> MAX interactor 1, dimerization protein </td> <td> MXI1 </td> <td> 4601 </td> <td> NM_001008541 /// NM_005962 /// NM_130439 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0042994 // cytoplasmic sequestering of transcription factor // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -211.52 </td> <td> 189.94 </td> <td> -8.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 219260_s_at </td> <td> 219260_s_at </td> <td> NM_015362 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015362.1 /DEF=Homo sapiens HSPC002 protein (HSPC002), mRNA. /FEA=mRNA /GEN=HSPC002 /PROD=HSPC002 protein /DB_XREF=gi:7661725 /UG=Hs.76907 HSPC002 protein /FL=gb:AF070658.1 gb:NM_015362.1 </td> <td> NM_015362 </td> <td> elongator acetyltransferase complex subunit 5 </td> <td> ELP5 </td> <td> 23587 </td> <td> NM_015362 /// NM_203413 /// NM_203414 /// NM_203415 </td> <td> 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0033588 // Elongator holoenzyme complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 89.30 </td> <td> 141.43 </td> <td> 8.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203068_at </td> <td> 203068_at </td> <td> NM_014851 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014851.1 /DEF=Homo sapiens KIAA0469 gene product (KIAA0469), mRNA. /FEA=mRNA /GEN=KIAA0469 /PROD=KIAA0469 gene product /DB_XREF=gi:7662139 /UG=Hs.7764 KIAA0469 gene product /FL=gb:AB007938.1 gb:NM_014851.1 </td> <td> NM_014851 </td> <td> kelch-like family member 21 </td> <td> KLHL21 </td> <td> 9903 </td> <td> NM_014851 /// XM_005263542 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0035853 // chromosome passenger complex localization to spindle midzone // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005827 // polar microtubule // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -87.88 </td> <td> 59.19 </td> <td> -8.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 213604_at </td> <td> 213604_at </td> <td> AW451236 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW451236 /FEA=EST /DB_XREF=gi:6992012 /DB_XREF=est:UI-H-BI3-alh-a-07-0-UI.s1 /CLONE=IMAGE:2736661 /UG=Hs.15535 Homo sapiens clone 24582 mRNA sequence </td> <td> AW451236 </td> <td> transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A) </td> <td> TCEB3 </td> <td> 6924 </td> <td> NM_003198 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 125.50 </td> <td> 191.15 </td> <td> 8.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 213682_at </td> <td> 213682_at </td> <td> AL036344 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL036344 /FEA=EST /DB_XREF=gi:5927743 /DB_XREF=est:DKFZp564A053_r1 /CLONE=DKFZp564A053 /UG=Hs.169329 DKFZP564A043 protein </td> <td> AL036344 </td> <td> nucleoporin 50kDa </td> <td> NUP50 </td> <td> 10762 </td> <td> NM_007172 /// NM_153645 /// XM_005261312 /// XM_005261313 /// XM_005261314 /// XM_006724103 /// XM_006724104 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046907 // intracellular transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 90.55 </td> <td> 208.42 </td> <td> 8.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200931_s_at </td> <td> 200931_s_at </td> <td> NM_014000 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014000.1 /DEF=Homo sapiens vinculin (VCL), transcript variant meta-VCL, mRNA. /FEA=mRNA /GEN=VCL /PROD=VCL isoform meta-VCL /DB_XREF=gi:7669549 /UG=Hs.75350 vinculin /FL=gb:NM_014000.1 </td> <td> NM_014000 </td> <td> vinculin </td> <td> VCL </td> <td> 7414 </td> <td> NM_003373 /// NM_014000 /// XM_005270142 /// XM_005270143 </td> <td> 0002009 // morphogenesis of an epithelium // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030032 // lamellipodium assembly // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // traceable author statement /// 0034333 // adherens junction assembly // inferred from mutant phenotype /// 0034394 // protein localization to cell surface // inferred from mutant phenotype /// 0043297 // apical junction assembly // inferred from mutant phenotype /// 0090136 // epithelial cell-cell adhesion // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0014704 // intercalated disc // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030055 // cell-substrate junction // non-traceable author statement /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043034 // costamere // inferred from direct assay /// 0043034 // costamere // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002162 // dystroglycan binding // inferred from physical interaction /// 0003779 // actin binding // inferred from direct assay /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from sequence or structural similarity /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0045294 // alpha-catenin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from sequence or structural similarity </td> <td> 558.00 </td> <td> 1366.60 </td> <td> 8.97 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201329_s_at </td> <td> 201329_s_at </td> <td> NM_005239 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005239.1 /DEF=Homo sapiens v-ets avian erythroblastosis virus E26 oncogene homolog 2 (ETS2), mRNA.  /FEA=mRNA /GEN=ETS2 /PROD=v-ets avian erythroblastosis virus E26 oncogenehomolog 2 /DB_XREF=gi:4885220 /UG=Hs.85146 v-ets avian erythroblastosis virus E26 oncogene homolog 2 /FL=gb:J04102.1 gb:NM_005239.1 </td> <td> NM_005239 </td> <td> v-ets avian erythroblastosis virus E26 oncogene homolog 2 </td> <td> ETS2 </td> <td> 2114 </td> <td> NM_001256295 /// NM_005239 /// XM_005260935 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001501 // skeletal system development // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0030154 // cell differentiation // not recorded /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0035259 // glucocorticoid receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -134.53 </td> <td> 191.59 </td> <td> -8.96 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 210111_s_at </td> <td> 210111_s_at </td> <td> AF277175 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF277175.1 /DEF=Homo sapiens PNAS-138 mRNA, complete cds. /FEA=mRNA /PROD=PNAS-138 /DB_XREF=gi:12751080 /UG=Hs.326790 Homo sapiens PNAS-138 mRNA, complete cds /FL=gb:AF277175.1 </td> <td> AF277175 </td> <td> kelch domain containing 10 </td> <td> KLHDC10 </td> <td> 23008 </td> <td> NM_014997 /// XM_005250233 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 112.47 </td> <td> 139.66 </td> <td> 8.95 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 206874_s_at </td> <td> 206874_s_at </td> <td> AL138761 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL138761 /DEF=Human DNA sequence from clone RP11-16H23 on chromosome 10. Contains the gene KIAA0204 (HSLK) for a protein kinase, the COL17A1 gene for collagen type XVII alpha 1 (BP180), ESTs and GSSs /FEA=mRNA_2 /DB_XREF=gi:8573811 /UG=Hs.105751 Ste20-related serinethreonine kinase /FL=gb:D86959.1 gb:NM_014720.1 </td> <td> AL138761 </td> <td> STE20-like kinase </td> <td> SLK </td> <td> 9748 </td> <td> NM_014720 /// XM_005270301 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // not recorded /// 0046777 // protein autophosphorylation // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> 84.77 </td> <td> 91.71 </td> <td> 8.93 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201032_at </td> <td> 201032_at </td> <td> NM_006698 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006698.1 /DEF=Homo sapiens bladder cancer associated protein (BLCAP), mRNA. /FEA=mRNA /GEN=BLCAP /PROD=bladder cancer associated protein /DB_XREF=gi:5729737 /UG=Hs.5300 bladder cancer associated protein /FL=gb:AF053470.1 gb:NM_006698.1 </td> <td> NM_006698 </td> <td> bladder cancer associated protein </td> <td> BLCAP </td> <td> 10904 </td> <td> NM_001167820 /// NM_001167821 /// NM_001167822 /// NM_001167823 /// NM_006698 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation /// 0030262 // apoptotic nuclear changes // inferred from direct assay </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 198.53 </td> <td> 252.19 </td> <td> 8.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 213019_at </td> <td> 213019_at </td> <td> AI123233 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI123233 /FEA=EST /DB_XREF=gi:3538999 /DB_XREF=est:qa47e04.x1 /CLONE=IMAGE:1689918 /UG=Hs.167496 RAN binding protein 6 </td> <td> AI123233 </td> <td> RAN binding protein 6 </td> <td> RANBP6 </td> <td> 26953 </td> <td> NM_001243202 /// NM_001243203 /// NM_012416 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 83.55 </td> <td> 86.35 </td> <td> 8.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212070_at </td> <td> 212070_at </td> <td> AL554008 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL554008 /FEA=EST /DB_XREF=gi:12894377 /DB_XREF=est:AL554008 /CLONE=CS0DI079YN13 (5 prime) /UG=Hs.6527 G protein-coupled receptor 56 </td> <td> AL554008 </td> <td> G protein-coupled receptor 56 </td> <td> GPR56 </td> <td> 9289 </td> <td> NM_001145770 /// NM_001145771 /// NM_001145772 /// NM_001145773 /// NM_001145774 /// NM_001290142 /// NM_001290143 /// NM_001290144 /// NM_005682 /// NM_201524 /// NM_201525 /// XM_005256237 /// XM_005256238 /// XM_005256239 /// XM_005256240 /// XM_005256241 /// XM_005256242 /// XM_005256243 /// XM_005256244 /// XM_005256245 /// XM_005256246 /// XM_005256247 /// XM_005256248 /// XM_005256249 /// XM_005256251 /// XM_005256252 /// XM_005256253 /// XM_005256254 /// XM_005256255 /// XM_006721338 /// XM_006721339 /// XM_006721340 /// XM_006721341 /// XM_006721342 /// XM_006721343 /// XM_006721344 /// XM_006721345 /// XM_006721346 /// XM_006721347 </td> <td> 0001525 // angiogenesis // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // inferred from direct assay /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010573 // vascular endothelial growth factor production // inferred from direct assay /// 0021801 // cerebral cortex radial glia guided migration // inferred from sequence or structural similarity /// 0021819 // layer formation in cerebral cortex // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035025 // positive regulation of Rho protein signal transduction // inferred from sequence or structural similarity /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0070528 // protein kinase C signaling // inferred from direct assay /// 2001223 // negative regulation of neuron migration // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097451 // glial limiting end-foot // inferred from sequence or structural similarity </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from sequence or structural similarity /// 0005518 // collagen binding // inferred from sequence or structural similarity /// 0050840 // extracellular matrix binding // inferred from sequence or structural similarity </td> <td> -186.27 </td> <td> 370.71 </td> <td> -8.91 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209017_s_at </td> <td> 209017_s_at </td> <td> U02389 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U02389.1 /DEF=Human hLON ATP-dependent protease mRNA, nuclear gene encoding mitochondrial protein, complete cds.  /FEA=mRNA /PROD=hLON ATP-dependent protease /DB_XREF=gi:639426 /UG=Hs.278614 protease, serine, 15 /FL=gb:BC000235.1 gb:NM_004793.1 gb:U02389.1 </td> <td> U02389 </td> <td> lon peptidase 1, mitochondrial </td> <td> LONP1 </td> <td> 9361 </td> <td> NM_001276479 /// NM_001276480 /// NM_004793 /// NR_076392 </td> <td> 0000002 // mitochondrial genome maintenance // non-traceable author statement /// 0001666 // response to hypoxia // inferred from expression pattern /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0007568 // aging // inferred from electronic annotation /// 0009725 // response to hormone // inferred from electronic annotation /// 0010044 // response to aluminum ion // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0032042 // mitochondrial DNA metabolic process // non-traceable author statement /// 0034599 // cellular response to oxidative stress // inferred by curator /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0043623 // cellular protein complex assembly // inferred from electronic annotation /// 0051131 // chaperone-mediated protein complex assembly // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from direct assay /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from direct assay /// 0070407 // oxidation-dependent protein catabolic process // inferred from mutant phenotype /// 0090296 // regulation of mitochondrial DNA replication // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from mutant phenotype /// 0016020 // membrane // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004176 // ATP-dependent peptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0009378 // four-way junction helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0043531 // ADP binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0051880 // G-quadruplex DNA binding // inferred from direct assay /// 0070182 // DNA polymerase binding // inferred from physical interaction /// 0070361 // mitochondrial light strand promoter anti-sense binding // inferred from direct assay /// 0070362 // mitochondrial heavy strand promoter anti-sense binding // inferred from direct assay /// 0070363 // mitochondrial light strand promoter sense binding // inferred from direct assay /// 0070364 // mitochondrial heavy strand promoter sense binding // inferred from direct assay </td> <td> -146.95 </td> <td> 224.35 </td> <td> -8.91 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 214789_x_at </td> <td> 214789_x_at </td> <td> AA524274 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA524274 /FEA=EST /DB_XREF=gi:2265202 /DB_XREF=est:ng34d08.s1 /CLONE=IMAGE:936687 /UG=Hs.155160 Splicing factor, arginineserine-rich, 46kD </td> <td> AA524274 </td> <td> serine/arginine-rich splicing factor 8 </td> <td> SRSF8 </td> <td> 10929 </td> <td> NM_032102 /// NR_103726 /// XR_428967 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 104.75 </td> <td> 254.28 </td> <td> 8.91 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200961_at </td> <td> 200961_at </td> <td> NM_012248 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012248.1 /DEF=Homo sapiens selenophosphate synthetase 2 (SPS2), mRNA. /FEA=mRNA /GEN=SPS2 /PROD=selenophosphate synthetase 2 /DB_XREF=gi:7657612 /UG=Hs.118725 selenophosphate synthetase 2 /FL=gb:BC002381.1 gb:U43286.1 gb:NM_012248.1 </td> <td> NM_012248 </td> <td> selenophosphate synthetase 2 </td> <td> SEPHS2 </td> <td> 22928 </td> <td> NM_012248 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016260 // selenocysteine biosynthetic process // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td>  </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004756 // selenide, water dikinase activity // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 92.67 </td> <td> 150.64 </td> <td> 8.87 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212725_s_at </td> <td> 212725_s_at </td> <td> N37081 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N37081 /FEA=EST /DB_XREF=gi:1158223 /DB_XREF=est:yy41f04.s1 /CLONE=IMAGE:273823 /UG=Hs.699 peptidylprolyl isomerase B (cyclophilin B) </td> <td> N37081 </td> <td> taurine up-regulated 1 (non-protein coding) </td> <td> TUG1 </td> <td> 55000 </td> <td> NR_002323 /// NR_110492 /// NR_110493 </td> <td>  </td> <td>  </td> <td>  </td> <td> 149.20 </td> <td> 276.10 </td> <td> 8.86 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 210338_s_at </td> <td> 210338_s_at </td> <td> AB034951 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB034951.1 /DEF=Homo sapiens HSC54 mRNA for heat shock cognate protein 54, complete cds.  /FEA=mRNA /GEN=HSC54 /PROD=heat shock cognate protein 54 /DB_XREF=gi:11526572 /UG=Hs.180414 heat shock 70kD protein 8 /FL=gb:AB034951.1 </td> <td> AB034951 </td> <td> heat shock 70kDa protein 8 /// small nucleolar RNA, C/D box 14C /// small nucleolar RNA, C/D box 14D </td> <td> HSPA8 /// SNORD14C /// SNORD14D </td> <td> 3312 /// 85389 /// 85390 </td> <td> NM_006597 /// NM_153201 /// NR_001453 /// NR_001454 /// XM_006718831 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006457 // protein folding // non-traceable author statement /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042026 // protein refolding // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 1902904 // negative regulation of fibril organization // inferred from direct assay </td> <td> 0000974 // Prp19 complex // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0061202 // clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016887 // ATPase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0023026 // MHC class II protein complex binding // inferred from direct assay /// 0031072 // heat shock protein binding // inferred from physical interaction /// 0042623 // ATPase activity, coupled // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from direct assay </td> <td> 1535.27 </td> <td> 2211.99 </td> <td> 8.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 217992_s_at </td> <td> 217992_s_at </td> <td> NM_024329 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024329.1 /DEF=Homo sapiens hypothetical protein MGC4342 (MGC4342), mRNA. /FEA=mRNA /GEN=MGC4342 /PROD=hypothetical protein MGC4342 /DB_XREF=gi:13443015 /UG=Hs.301342 hypothetical protein MGC4342 /FL=gb:BC003033.1 gb:NM_024329.1 </td> <td> NM_024329 </td> <td> EF-hand domain family, member D2 </td> <td> EFHD2 </td> <td> 79180 </td> <td> NM_024329 /// XM_005246000 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 127.52 </td> <td> 167.79 </td> <td> 8.84 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209355_s_at </td> <td> 209355_s_at </td> <td> AB000889 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB000889.1 /DEF=Homo sapiens mRNA for phosphatidic acid phosphatase 2b, complete cds.  /FEA=mRNA /PROD=phosphatidic acid phosphatase 2b /DB_XREF=gi:2467299 /UG=Hs.331371 phosphatidic acid phosphatase type 2B /FL=gb:U79294.1 gb:AB000889.1 gb:AF017786.1 </td> <td> AB000889 </td> <td> phosphatidic acid phosphatase type 2B </td> <td> PPAP2B </td> <td> 8613 </td> <td> NM_003713 /// NM_177414 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0008354 // germ cell migration // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0030111 // regulation of Wnt signaling pathway // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0034109 // homotypic cell-cell adhesion // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0044328 // canonical Wnt signaling pathway involved in positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0044329 // canonical Wnt signaling pathway involved in positive regulation of cell-cell adhesion // inferred from mutant phenotype /// 0044330 // canonical Wnt signaling pathway involved in positive regulation of wound healing // inferred from mutant phenotype /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0060070 // canonical Wnt signaling pathway // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005912 // adherens junction // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // traceable author statement /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008195 // phosphatidate phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042577 // lipid phosphatase activity // inferred from electronic annotation </td> <td> -147.50 </td> <td> 114.15 </td> <td> -8.84 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 215313_x_at </td> <td> 215313_x_at </td> <td> AA573862 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA573862 /FEA=EST /DB_XREF=gi:2348377 /DB_XREF=est:nk08f01.s1 /CLONE=IMAGE:1012921 /UG=Hs.181244 major histocompatibility complex, class I, A </td> <td> AA573862 </td> <td> major histocompatibility complex, class I, A </td> <td> HLA-A </td> <td> 3105 </td> <td> NM_001242758 /// NM_002116 /// XM_005275331 /// XM_006725750 /// XM_006725751 /// XM_006725857 /// XM_006725858 /// XM_006725859 /// XM_006725946 /// XM_006726046 /// XM_006726047 /// XM_006726135 /// XM_006726136 /// XM_006726137 /// XR_430999 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from direct assay /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002486 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent // inferred from direct assay /// 0006955 // immune response // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016045 // detection of bacterium // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0042270 // protection from natural killer cell mediated cytotoxicity // inferred from direct assay /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 2000568 // positive regulation of memory T cell activation // inferred from direct assay </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005797 // Golgi medial cisterna // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070971 // endoplasmic reticulum exit site // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005102 // receptor binding // not recorded /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0030881 // beta-2-microglobulin binding // inferred from direct assay /// 0030881 // beta-2-microglobulin binding // inferred from sequence or structural similarity /// 0042605 // peptide antigen binding // not recorded /// 0042605 // peptide antigen binding // inferred from direct assay /// 0042605 // peptide antigen binding // inferred from sequence or structural similarity /// 0042608 // T cell receptor binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046977 // TAP binding // inferred from direct assay </td> <td> -759.75 </td> <td> 1612.00 </td> <td> -8.80 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209358_at </td> <td> 209358_at </td> <td> AF118094 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF118094.1 /DEF=Homo sapiens PRO2134 mRNA, complete cds. /FEA=mRNA /PROD=PRO2134 /DB_XREF=gi:6650833 /UG=Hs.83126 TATA box binding protein (TBP)-associated factor, RNA polymerase II, I, 28kD /FL=gb:D63705.1 gb:NM_005643.1 gb:AF118094.1 </td> <td> AF118094 </td> <td> TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa </td> <td> TAF11 </td> <td> 6882 </td> <td> NM_001270488 /// NM_005643 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred by curator /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred by curator /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0043923 // positive regulation by host of viral transcription // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042809 // vitamin D receptor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> 88.47 </td> <td> 98.76 </td> <td> 8.78 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 213029_at </td> <td> 213029_at </td> <td> BG478428 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG478428 /FEA=EST /DB_XREF=gi:13410807 /DB_XREF=est:602523839F1 /CLONE=IMAGE:4642353 /UG=Hs.326416 Homo sapiens mRNA; cDNA DKFZp564H1916 (from clone DKFZp564H1916) </td> <td> BG478428 </td> <td> nuclear factor I/B </td> <td> NFIB </td> <td> 4781 </td> <td> NM_001190737 /// NM_001190738 /// NM_001282787 /// NM_005596 /// XM_005251467 /// XM_005251468 /// XM_005251469 /// XM_005251470 /// XM_005251471 /// XM_006716773 /// XM_006716774 /// XM_006716775 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from sequence or structural similarity /// 0021740 // principal sensory nucleus of trigeminal nerve development // inferred from sequence or structural similarity /// 0021960 // anterior commissure morphogenesis // inferred from sequence or structural similarity /// 0030324 // lung development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060486 // Clara cell differentiation // inferred from sequence or structural similarity /// 0060509 // Type I pneumocyte differentiation // inferred from sequence or structural similarity /// 0060510 // Type II pneumocyte differentiation // inferred from sequence or structural similarity /// 0061141 // lung ciliated cell differentiation // inferred from sequence or structural similarity /// 0071679 // commissural neuron axon guidance // inferred from sequence or structural similarity /// 2000791 // negative regulation of mesenchymal cell proliferation involved in lung development // inferred from sequence or structural similarity /// 2000795 // negative regulation of epithelial cell proliferation involved in lung morphogenesis // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0044300 // cerebellar mossy fiber // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation </td> <td> 182.82 </td> <td> 303.79 </td> <td> 8.78 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212333_at </td> <td> 212333_at </td> <td> AL049943 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049943.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564F0522 (from clone DKFZp564F0522). /FEA=mRNA /GEN=DKFZp564F0522 /PROD=hypothetical protein /DB_XREF=gi:4884187 /UG=Hs.23060 DKFZP564F0522 protein </td> <td> AL049943 </td> <td> family with sequence similarity 98, member A </td> <td> FAM98A </td> <td> 25940 </td> <td> NM_015475 </td> <td>  </td> <td>  </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 238.05 </td> <td> 228.95 </td> <td> 8.77 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 210229_s_at </td> <td> 210229_s_at </td> <td> M11734 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M11734.1 /DEF=Human granulocytemacrophage colony-stimulating factor mRNA, complete cds.  /FEA=mRNA /GEN=CSF2 /DB_XREF=gi:181149 /UG=Hs.1349 colony stimulating factor 2 (granulocyte-macrophage) /FL=gb:M11734.1 gb:NM_000758.1 </td> <td> M11734 </td> <td> colony stimulating factor 2 (granulocyte-macrophage) </td> <td> CSF2 </td> <td> 1437 </td> <td> NM_000758 </td> <td> 0001892 // embryonic placenta development // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from direct assay /// 0032747 // positive regulation of interleukin-23 production // inferred from direct assay /// 0042045 // epithelial fluid transport // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042523 // positive regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0043011 // myeloid dendritic cell differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045918 // negative regulation of cytolysis // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071803 // positive regulation of podosome assembly // inferred from direct assay /// 0097028 // dendritic cell differentiation // inferred from direct assay /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0005129 // granulocyte macrophage colony-stimulating factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation </td> <td> -578.57 </td> <td> 293.39 </td> <td> -8.77 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209001_s_at </td> <td> 209001_s_at </td> <td> BC005398 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005398.1 /DEF=Homo sapiens, clone MGC:12537, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:12537) /DB_XREF=gi:13529286 /UG=Hs.106909 DKFZP566D193 protein /FL=gb:BC005398.1 </td> <td> BC005398 </td> <td> anaphase promoting complex subunit 13 </td> <td> ANAPC13 </td> <td> 25847 </td> <td> NM_001242374 /// NM_001242375 /// NM_015391 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005680 // anaphase-promoting complex // inferred from direct assay </td> <td>  </td> <td> 254.35 </td> <td> 606.42 </td> <td> 8.76 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 219778_at </td> <td> 219778_at </td> <td> NM_012082 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012082.2 /DEF=Homo sapiens Friend of GATA2 (FOG2), mRNA. /FEA=mRNA /GEN=FOG2 /PROD=Friend of GATA2 /DB_XREF=gi:10862688 /UG=Hs.106309 Friend of GATA2 /FL=gb:NM_012082.2 gb:AF119334.1 </td> <td> NM_012082 </td> <td> zinc finger protein, FOG family member 2 </td> <td> ZFPM2 </td> <td> 23414 </td> <td> NM_012082 /// XM_005250850 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0003148 // outflow tract septum morphogenesis // inferred from mutant phenotype /// 0003221 // right ventricular cardiac muscle tissue morphogenesis // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048738 // cardiac muscle tissue development // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from mutant phenotype /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 2000020 // positive regulation of male gonad development // inferred from electronic annotation /// 2000195 // negative regulation of female gonad development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0001071 // nucleic acid binding transcription factor activity // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // non-traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -280.45 </td> <td> 223.00 </td> <td> -8.75 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 209290_s_at </td> <td> 209290_s_at </td> <td> BC001283 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001283.1 /DEF=Homo sapiens, Similar to nuclear factor IB, clone MGC:5146, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to nuclear factor IB /DB_XREF=gi:12654878 /UG=Hs.33287 nuclear factor IB /FL=gb:BC001283.1 gb:U85193.1 gb:NM_005596.1 </td> <td> BC001283 </td> <td> nuclear factor I/B </td> <td> NFIB </td> <td> 4781 </td> <td> NM_001190737 /// NM_001190738 /// NM_001282787 /// NM_005596 /// XM_005251467 /// XM_005251468 /// XM_005251469 /// XM_005251470 /// XM_005251471 /// XM_006716773 /// XM_006716774 /// XM_006716775 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from sequence or structural similarity /// 0021740 // principal sensory nucleus of trigeminal nerve development // inferred from sequence or structural similarity /// 0021960 // anterior commissure morphogenesis // inferred from sequence or structural similarity /// 0030324 // lung development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060486 // Clara cell differentiation // inferred from sequence or structural similarity /// 0060509 // Type I pneumocyte differentiation // inferred from sequence or structural similarity /// 0060510 // Type II pneumocyte differentiation // inferred from sequence or structural similarity /// 0061141 // lung ciliated cell differentiation // inferred from sequence or structural similarity /// 0071679 // commissural neuron axon guidance // inferred from sequence or structural similarity /// 2000791 // negative regulation of mesenchymal cell proliferation involved in lung development // inferred from sequence or structural similarity /// 2000795 // negative regulation of epithelial cell proliferation involved in lung morphogenesis // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0044300 // cerebellar mossy fiber // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation </td> <td> 317.63 </td> <td> 541.69 </td> <td> 8.73 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 203370_s_at </td> <td> 203370_s_at </td> <td> NM_005451 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005451.2 /DEF=Homo sapiens enigma (LIM domain protein) (ENIGMA), mRNA. /FEA=mRNA /GEN=ENIGMA /PROD=enigma protein /DB_XREF=gi:11496884 /UG=Hs.102948 enigma (LIM domain protein) /FL=gb:NM_005451.2 gb:BC001093.1 gb:AF265209.1 </td> <td> NM_005451 </td> <td> PDZ and LIM domain 7 (enigma) </td> <td> PDLIM7 </td> <td> 9260 </td> <td> NM_005451 /// NM_203352 /// NM_203353 /// NM_213636 /// NR_103804 /// XM_006714937 /// XM_006714938 /// XM_006714939 /// XM_006714940 /// XM_006714941 </td> <td> 0001503 // ossification // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from electronic annotation /// 0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 131.63 </td> <td> 222.36 </td> <td> 8.71 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212168_at </td> <td> 212168_at </td> <td> AL514547 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL514547 /FEA=EST /DB_XREF=gi:12778041 /DB_XREF=est:AL514547 /CLONE=CL0BB004ZC07 (3 prime) /UG=Hs.180895 putative brain nuclearly-targeted protein </td> <td> AL514547 </td> <td> RNA binding motif protein 12 </td> <td> RBM12 </td> <td> 10137 </td> <td> NM_001198838 /// NM_001198840 /// NM_006047 /// NM_152838 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 189.78 </td> <td> 168.44 </td> <td> 8.71 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 204744_s_at </td> <td> 204744_s_at </td> <td> NM_013417 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013417.1 /DEF=Homo sapiens isoleucine-tRNA synthetase (IARS), transcript variant long, mRNA.  /FEA=mRNA /GEN=IARS /PROD=isoleucine-tRNA synthetase /DB_XREF=gi:7770071 /UG=Hs.172801 isoleucine-tRNA synthetase /FL=gb:U04953.1 gb:D28473.1 gb:NM_013417.1 </td> <td> NM_013417 </td> <td> isoleucyl-tRNA synthetase </td> <td> IARS </td> <td> 3376 </td> <td> NM_002161 /// NM_013417 /// NR_073446 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006428 // isoleucyl-tRNA aminoacylation // inferred from electronic annotation /// 0006450 // regulation of translational fidelity // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0002161 // aminoacyl-tRNA editing activity // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004822 // isoleucine-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -327.08 </td> <td> 842.31 </td> <td> -8.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 210907_s_at </td> <td> 210907_s_at </td> <td> BC002506 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002506.1 /DEF=Homo sapiens, programmed cell death 10, clone MGC:1212, mRNA, complete cds.  /FEA=mRNA /PROD=programmed cell death 10 /DB_XREF=gi:12803370 /UG=Hs.28866 programmed cell death 10 /FL=gb:BC002506.1 </td> <td> BC002506 </td> <td> programmed cell death 10 </td> <td> PDCD10 </td> <td> 11235 </td> <td> NM_007217 /// NM_145859 /// NM_145860 /// XM_005247086 /// XM_005247087 /// XM_005247088 /// XM_006713485 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -189.30 </td> <td> 726.08 </td> <td> -8.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 218041_x_at </td> <td> 218041_x_at </td> <td> NM_018573 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018573.1 /DEF=Homo sapiens hypothetical protein PRO1068 (PRO1068), mRNA. /FEA=mRNA /GEN=PRO1068 /PROD=hypothetical protein PRO1068 /DB_XREF=gi:8924006 /UG=Hs.321158 hypothetical protein PRO1068 /FL=gb:AF116620.1 gb:NM_018573.1 </td> <td> NM_018573 </td> <td> solute carrier family 38, member 2 </td> <td> SLC38A2 </td> <td> 54407 </td> <td> NM_018976 /// XM_005268983 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0014047 // glutamate secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation </td> <td> -857.77 </td> <td> 1757.21 </td> <td> -8.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 212944_at </td> <td> 212944_at </td> <td> AK024896 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024896.1 /DEF=Homo sapiens cDNA: FLJ21243 fis, clone COL01164. /FEA=mRNA /DB_XREF=gi:10437310 /UG=Hs.268016 Homo sapiens cDNA: FLJ21243 fis, clone COL01164 </td> <td> AK024896 </td> <td> solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 </td> <td> SLC5A3 </td> <td> 6526 </td> <td> NM_006933 </td> <td> 0006020 // inositol metabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0015798 // myo-inositol transport // traceable author statement /// 0043576 // regulation of respiratory gaseous exchange // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0015935 // small ribosomal subunit // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0005367 // myo-inositol:sodium symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation </td> <td> 76.83 </td> <td> 72.56 </td> <td> 8.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 219041_s_at </td> <td> 219041_s_at </td> <td> NM_014374 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014374.1 /DEF=Homo sapiens zinc finger protein (AP4), mRNA. /FEA=mRNA /GEN=AP4 /PROD=zinc finger protein /DB_XREF=gi:7656889 /UG=Hs.90693 zinc finger protein /FL=gb:BC000363.1 gb:NM_014374.1 </td> <td> NM_014374 </td> <td> replication initiator 1 </td> <td> REPIN1 </td> <td> 29803 </td> <td> NM_001099695 /// NM_001099696 /// NM_013400 /// NM_014374 /// XM_005249985 /// XM_006715947 /// XM_006715948 /// XM_006715949 /// XM_006715950 /// XM_006715951 /// XM_006715952 /// XM_006715953 </td> <td> 0006260 // DNA replication // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0046839 // phospholipid dephosphorylation // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 2000191 // regulation of fatty acid transport // inferred from electronic annotation /// 2001273 // regulation of glucose import in response to insulin stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005664 // nuclear origin of replication recognition complex // traceable author statement /// 0005811 // lipid particle // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0022626 // cytosolic ribosome // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0008195 // phosphatidate phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042577 // lipid phosphatase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 86.42 </td> <td> 136.94 </td> <td> 8.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 213857_s_at </td> <td> 213857_s_at </td> <td> BG230614 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG230614 /FEA=EST /DB_XREF=gi:12725656 /DB_XREF=est:naf41b12.x1 /CLONE=IMAGE:4143335 /UG=Hs.82685 CD47 antigen (Rh-related antigen, integrin-associated signal transducer) </td> <td> BG230614 </td> <td> CD47 molecule </td> <td> CD47 </td> <td> 961 </td> <td> NM_001025079 /// NM_001025080 /// NM_001777 /// NM_198793 /// XM_005247908 /// XM_005247909 /// XR_241521 /// XR_241522 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008228 // opsonization // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0009617 // response to bacterium // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from direct assay /// 0030198 // extracellular matrix organization // traceable author statement /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050870 // positive regulation of T cell activation // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0070053 // thrombospondin receptor activity // inferred from physical interaction </td> <td> -181.50 </td> <td> 263.35 </td> <td> -8.69 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 200905_x_at </td> <td> 200905_x_at </td> <td> NM_005516 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005516.1 /DEF=Homo sapiens major histocompatibility complex, class I, E (HLA-E), mRNA.  /FEA=mRNA /GEN=HLA-E /PROD=major histocompatibility complex, class I, E /DB_XREF=gi:5031744 /UG=Hs.181392 major histocompatibility complex, class I, E /FL=gb:BC002578.1 gb:NM_005516.1 </td> <td> NM_005516 </td> <td> major histocompatibility complex, class I, E </td> <td> HLA-E </td> <td> 3133 </td> <td> NM_005516 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002476 // antigen processing and presentation of endogenous peptide antigen via MHC class Ib // inferred from direct assay /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002717 // positive regulation of natural killer cell mediated immunity // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042270 // protection from natural killer cell mediated cytotoxicity // inferred from direct assay /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005102 // receptor binding // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0042288 // MHC class I protein binding // inferred from direct assay /// 0042605 // peptide antigen binding // not recorded /// 0042605 // peptide antigen binding // inferred from direct assay </td> <td> -378.35 </td> <td> 767.77 </td> <td> -8.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.42 </td> </tr>
  <tr> <td> 201983_s_at </td> <td> 201983_s_at </td> <td> AW157070 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW157070 /FEA=EST /DB_XREF=gi:6228471 /DB_XREF=est:au91e07.x1 /CLONE=IMAGE:2783652 /UG=Hs.77432 epidermal growth factor receptor (avian erythroblastic leukemia viral (v-erb-b) oncogene homolog) /FL=gb:NM_005228.1 </td> <td> AW157070 </td> <td> epidermal growth factor receptor </td> <td> EGFR </td> <td> 1956 </td> <td> NM_005228 /// NM_201282 /// NM_201283 /// NM_201284 </td> <td> 0000165 // MAPK cascade // non-traceable author statement /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001503 // ossification // non-traceable author statement /// 0001889 // liver development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001942 // hair follicle development // inferred from electronic annotation /// 0005976 // polysaccharide metabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // non-traceable author statement /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008544 // epidermis development // inferred from electronic annotation /// 0010960 // magnesium ion homeostasis // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016101 // diterpenoid metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from mutant phenotype /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0019694 // alkanesulfonate metabolic process // inferred from electronic annotation /// 0021795 // cerebral cortex cell migration // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0031659 // positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle // inferred from direct assay /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032930 // positive regulation of superoxide anion generation // inferred from electronic annotation /// 0033590 // response to cobalamin // inferred from electronic annotation /// 0033594 // response to hydroxyisoflavone // inferred from electronic annotation /// 0033993 // response to lipid // inferred from electronic annotation /// 0035413 // positive regulation of catenin import into nucleus // inferred from mutant phenotype /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0042698 // ovulation cycle // inferred from electronic annotation /// 0042743 // hydrogen peroxide metabolic process // inferred from electronic annotation /// 0043006 // activation of phospholipase A2 activity by calcium-mediated signaling // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043586 // tongue development // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0045739 // positive regulation of DNA repair // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0045909 // positive regulation of vasodilation // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048143 // astrocyte activation // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0050999 // regulation of nitric-oxide synthase activity // inferred from direct assay /// 0051205 // protein insertion into membrane // traceable author statement /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from mutant phenotype /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0060571 // morphogenesis of an epithelial fold // inferred from electronic annotation /// 0070141 // response to UV-A // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from sequence or structural similarity /// 0071392 // cellular response to estradiol stimulus // inferred from direct assay /// 0071549 // cellular response to dexamethasone stimulus // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // traceable author statement /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070435 // Shc-EGFR complex // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from mutant phenotype /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004716 // receptor signaling protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // non-traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0030235 // nitric-oxide synthase regulator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0048408 // epidermal growth factor binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay </td> <td> -81.00 </td> <td> 78.67 </td> <td> -8.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 206026_s_at </td> <td> 206026_s_at </td> <td> NM_007115 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007115.1 /DEF=Homo sapiens tumor necrosis factor, alpha-induced protein 6 (TNFAIP6), mRNA.  /FEA=mRNA /GEN=TNFAIP6 /PROD=tumor necrosis factor, alpha-induced protein 6 /DB_XREF=gi:6005905 /UG=Hs.29352 tumor necrosis factor, alpha-induced protein 6 /FL=gb:NM_007115.1 </td> <td> NM_007115 </td> <td> tumor necrosis factor, alpha-induced protein 6 </td> <td> TNFAIP6 </td> <td> 7130 </td> <td> NM_007115 </td> <td> 0006954 // inflammatory response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement </td> <td>  </td> <td> 0005540 // hyaluronic acid binding // inferred from electronic annotation </td> <td> -96.83 </td> <td> 64.24 </td> <td> -8.67 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202307_s_at </td> <td> 202307_s_at </td> <td> NM_000593 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000593.2 /DEF=Homo sapiens ATP-binding cassette, sub-family B (MDRTAP), member 2 (ABCB2), mRNA.  /FEA=mRNA /GEN=ABCB2 /PROD=ATP-binding cassette, sub-family B, member 2 /DB_XREF=gi:9665247 /UG=Hs.158164 ATP-binding cassette, sub-family B (MDRTAP), member 2 /FL=gb:L21204.1 gb:L21205.1 gb:L21206.1 gb:L21207.1 gb:L21208.1 gb:NM_000593.2 </td> <td> NM_000593 </td> <td> transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) </td> <td> TAP1 </td> <td> 6890 </td> <td> NM_000593 /// NM_001292022 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity //  /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006952 // defense response // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0015833 // peptide transport // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019060 // intracellular transport of viral protein in host cell // inferred from mutant phenotype /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from mutant phenotype /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0046967 // cytosol to ER transport // inferred from mutant phenotype /// 0055085 // transmembrane transport // not recorded </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005829 // cytosol // non-traceable author statement /// 0005886 // plasma membrane //  /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay /// 0042825 // TAP complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0015197 // peptide transporter activity // inferred from genetic interaction /// 0015197 // peptide transporter activity // inferred from mutant phenotype /// 0015421 // oligopeptide-transporting ATPase activity //  /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0023029 // MHC class Ib protein binding // inferred from physical interaction /// 0042288 // MHC class I protein binding // inferred from electronic annotation /// 0042605 // peptide antigen binding // non-traceable author statement /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // not recorded /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0043531 // ADP binding // inferred from direct assay /// 0046978 // TAP1 binding // inferred from sequence or structural similarity /// 0046979 // TAP2 binding // inferred from physical interaction /// 0046980 // tapasin binding // </td> <td> -77.50 </td> <td> 75.60 </td> <td> -8.67 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212472_at </td> <td> 212472_at </td> <td> BE965029 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE965029 /FEA=EST /DB_XREF=gi:11768976 /DB_XREF=est:601658812R1 /CLONE=IMAGE:3886131 /UG=Hs.198793 Homo sapiens cDNA: FLJ22463 fis, clone HRC10126 </td> <td> BE965029 </td> <td> microtubule associated monooxygenase, calponin and LIM domain containing 2 </td> <td> MICAL2 </td> <td> 9645 </td> <td> NM_001282663 /// NM_001282664 /// NM_001282665 /// NM_001282666 /// NM_001282667 /// NM_001282668 /// NM_014632 /// XM_005253249 /// XM_005253251 /// XM_006718391 /// XM_006718392 /// XM_006718393 </td> <td> 0001947 // heart looping // inferred from sequence or structural similarity /// 0007010 // cytoskeleton organization // inferred from direct assay /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0010735 // positive regulation of transcription via serum response element binding // inferred from mutant phenotype /// 0019417 // sulfur oxidation // inferred from direct assay /// 0019417 // sulfur oxidation // inferred from sequence or structural similarity /// 0030042 // actin filament depolymerization // inferred from direct assay /// 0030042 // actin filament depolymerization // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from direct assay /// 0003779 // actin binding // inferred from sequence or structural similarity /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen // inferred from sequence or structural similarity /// 0043914 // NADPH:sulfur oxidoreductase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from sequence or structural similarity </td> <td> 214.20 </td> <td> 390.88 </td> <td> 8.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209630_s_at </td> <td> 209630_s_at </td> <td> AL043967 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL043967 /FEA=EST /DB_XREF=gi:5432195 /DB_XREF=est:DKFZp434H1028_s1 /CLONE=DKFZp434H1028 /UG=Hs.27747 G protein-coupled receptor 37 (endothelin receptor type B-like) /FL=gb:U87460.1 </td> <td> AL043967 </td> <td> F-box and WD repeat domain containing 2 </td> <td> FBXW2 </td> <td> 26190 </td> <td> NM_012164 /// XM_005251908 /// XM_005251910 /// XM_005251912 /// XM_005251913 /// XM_006717049 /// XM_006717050 /// XM_006717051 </td> <td> 0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 71.12 </td> <td> 74.94 </td> <td> 8.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201054_at </td> <td> 201054_at </td> <td> BE966599 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE966599 /FEA=EST /DB_XREF=gi:11772191 /DB_XREF=est:601660283R1 /CLONE=IMAGE:3906044 /UG=Hs.77492 heterogeneous nuclear ribonucleoprotein A0 /FL=gb:BC001008.1 gb:NM_006805.1 gb:U23803.1 </td> <td> BE966599 </td> <td> heterogeneous nuclear ribonucleoprotein A0 </td> <td> HNRNPA0 </td> <td> 10949 </td> <td> NM_006805 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from sequence or structural similarity /// 0070935 // 3'-UTR-mediated mRNA stabilization // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 273.62 </td> <td> 406.71 </td> <td> 8.64 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203738_at </td> <td> 203738_at </td> <td> AI421192 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI421192 /FEA=EST /DB_XREF=gi:4267123 /DB_XREF=est:tf24e12.x1 /CLONE=IMAGE:2097166 /UG=Hs.151046 hypothetical protein FLJ11193 /FL=gb:NM_018356.1 </td> <td> AI421192 </td> <td> chromosome 5 open reading frame 22 </td> <td> C5orf22 </td> <td> 55322 </td> <td> NM_018356 /// XM_005248319 /// XM_006714479 /// XM_006714480 /// XR_241704 </td> <td>  </td> <td>  </td> <td> 0008013 // beta-catenin binding // inferred from electronic annotation </td> <td> 67.50 </td> <td> 139.82 </td> <td> 8.62 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209373_at </td> <td> 209373_at </td> <td> BC003179 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003179.1 /DEF=Homo sapiens, clone MGC:4419, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:4419) /DB_XREF=gi:13112010 /UG=Hs.185055 BENE protein /FL=gb:BC003179.1 gb:NM_005434.1 </td> <td> BC003179 </td> <td> mal, T-cell differentiation protein-like </td> <td> MALL </td> <td> 7851 </td> <td> NM_005434 </td> <td> 0042632 // cholesterol homeostasis // non-traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 233.15 </td> <td> 281.02 </td> <td> 8.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201918_at </td> <td> 201918_at </td> <td> AI927944 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI927944 /FEA=EST /DB_XREF=gi:5663908 /DB_XREF=est:wp03g05.x1 /CLONE=IMAGE:2463800 /UG=Hs.42484 hypothetical protein FLJ10618 /FL=gb:NM_018155.1 </td> <td> AI927944 </td> <td> solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 </td> <td> SLC25A36 </td> <td> 55186 </td> <td> NM_001104647 /// NM_018155 /// XM_005247575 /// XM_006713685 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -199.15 </td> <td> 247.55 </td> <td> -8.58 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202864_s_at </td> <td> 202864_s_at </td> <td> NM_003113 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003113.1 /DEF=Homo sapiens nuclear antigen Sp100 (SP100), mRNA. /FEA=mRNA /GEN=SP100 /PROD=nuclear antigen Sp100 /DB_XREF=gi:4507164 /UG=Hs.77617 nuclear antigen Sp100 /FL=gb:M60618.1 gb:NM_003113.1 </td> <td> NM_003113 </td> <td> SP100 nuclear antigen </td> <td> SP100 </td> <td> 6672 </td> <td> NM_001080391 /// NM_001206701 /// NM_001206702 /// NM_001206703 /// NM_001206704 /// NM_003113 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000723 // telomere maintenance // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0032526 // response to retinoic acid // inferred from direct assay /// 0032897 // negative regulation of viral transcription // inferred from direct assay /// 0034097 // response to cytokine // inferred from direct assay /// 0034340 // response to type I interferon // inferred from direct assay /// 0034340 // response to type I interferon // inferred from mutant phenotype /// 0034341 // response to interferon-gamma // inferred from direct assay /// 0034341 // response to interferon-gamma // inferred from mutant phenotype /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045765 // regulation of angiogenesis // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0046826 // negative regulation of protein export from nucleus // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred by curator /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051271 // negative regulation of cellular component movement // inferred from mutant phenotype /// 0060333 // interferon-gamma-mediated signaling pathway // inferred by curator /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // inferred by curator /// 1902041 // regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 1902044 // regulation of Fas signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0030870 // Mre11 complex // inferred from direct assay /// 0034399 // nuclear periphery // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction </td> <td> -143.03 </td> <td> 207.79 </td> <td> -8.57 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218163_at </td> <td> 218163_at </td> <td> NM_014060 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014060.1 /DEF=Homo sapiens MCT-1 protein (MCT-1), mRNA. /FEA=mRNA /GEN=MCT-1 /PROD=MCT-1 protein /DB_XREF=gi:7662501 /UG=Hs.102696 MCT-1 protein /FL=gb:BC001013.1 gb:AB034206.1 gb:NM_014060.1 </td> <td> NM_014060 </td> <td> malignant T cell amplified sequence 1 </td> <td> MCTS1 </td> <td> 28985 </td> <td> NM_001137554 /// NM_014060 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from direct assay /// 0002192 // IRES-dependent translational initiation // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0032790 // ribosome disassembly // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation </td> <td> 126.83 </td> <td> 283.56 </td> <td> 8.57 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213175_s_at </td> <td> 213175_s_at </td> <td> AL049650 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049650 /DEF=Human DNA sequence from clone 734P14 on chromosome 20. Contains a KRAB box and C2H2 Zinc finger domain protein pseudogene, the gene for snRNP (small nuclear ribonucleoprotein particle) proteins B and B and the gene for a novel transglutaminase si... /FEA=mRNA_3 /DB_XREF=gi:5123801 /UG=Hs.83753 small nuclear ribonucleoprotein polypeptides B and B1 </td> <td> AL049650 </td> <td> small nuclear ribonucleoprotein polypeptides B and B1 </td> <td> SNRPB </td> <td> 6628 </td> <td> NM_003091 /// NM_198216 </td> <td> 0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008334 // histone mRNA metabolic process // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005683 // U7 snRNP // inferred from direct assay /// 0005685 // U1 snRNP // inferred from direct assay /// 0005687 // U4 snRNP // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005732 // small nucleolar ribonucleoprotein complex // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement /// 0034709 // methylosome // inferred from direct assay /// 0034719 // SMN-Sm protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0071208 // histone pre-mRNA DCP binding // inferred from electronic annotation </td> <td> -185.25 </td> <td> 1072.20 </td> <td> -8.55 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213262_at </td> <td> 213262_at </td> <td> AI932370 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI932370 /FEA=EST /DB_XREF=gi:5671107 /DB_XREF=est:wd27e11.x1 /CLONE=IMAGE:2329388 /UG=Hs.159492 spastic ataxia of Charlevoix-Saguenay (sacsin) /FL=gb:NM_014363.1 </td> <td> AI932370 </td> <td> sacsin molecular chaperone </td> <td> SACS </td> <td> 26278 </td> <td> NM_001278055 /// NM_014363 /// XM_005266338 </td> <td> 0006457 // protein folding // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0090084 // negative regulation of inclusion body assembly // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0030424 // axon // traceable author statement /// 0030425 // dendrite // traceable author statement /// 0070852 // cell body fiber // traceable author statement </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from direct assay /// 0070628 // proteasome binding // inferred from physical interaction </td> <td> 139.30 </td> <td> 231.45 </td> <td> 8.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 214974_x_at </td> <td> 214974_x_at </td> <td> AK026546 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026546.1 /DEF=Homo sapiens cDNA: FLJ22893 fis, clone KAT04792. /FEA=mRNA /DB_XREF=gi:10439427 /UG=Hs.287716 Homo sapiens cDNA: FLJ22893 fis, clone KAT04792 </td> <td> AK026546 </td> <td> chemokine (C-X-C motif) ligand 5 </td> <td> CXCL5 </td> <td> 6374 </td> <td> NM_002994 </td> <td> 0006935 // chemotaxis // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0060326 // cell chemotaxis // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from electronic annotation </td> <td> -263.83 </td> <td> 153.34 </td> <td> -8.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202047_s_at </td> <td> 202047_s_at </td> <td> AI458128 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI458128 /FEA=EST /DB_XREF=gi:4312134 /DB_XREF=est:tj64g03.x1 /CLONE=IMAGE:2146324 /UG=Hs.107374 chromobox homolog 6 /FL=gb:NM_014292.1 </td> <td> AI458128 </td> <td> chromobox homolog 6 </td> <td> CBX6 </td> <td> 23466 </td> <td> NM_014292 /// XM_005261412 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation </td> <td> 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0031519 // PcG protein complex // inferred from direct assay </td> <td> 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 124.33 </td> <td> 134.16 </td> <td> 8.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200826_at </td> <td> 200826_at </td> <td> NM_004597 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004597.3 /DEF=Homo sapiens small nuclear ribonucleoprotein D2 polypeptide (16.5kD) (SNRPD2), mRNA.  /FEA=mRNA /GEN=SNRPD2 /PROD=small nuclear ribonucleoprotein D2 polypeptide(16.5kD) /DB_XREF=gi:7242206 /UG=Hs.53125 small nuclear ribonucleoprotein D2 polypeptide (16.5kD) /FL=gb:BC000486.1 gb:BC001930.1 gb:U15008.1 gb:NM_004597.3 </td> <td> NM_004597 </td> <td> small nuclear ribonucleoprotein D2 polypeptide 16.5kDa </td> <td> SNRPD2 </td> <td> 6633 </td> <td> NM_004597 /// NM_177542 /// XM_005259180 </td> <td> 0000245 // spliceosomal complex assembly // traceable author statement /// 0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005685 // U1 snRNP // inferred from direct assay /// 0005687 // U4 snRNP // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement /// 0034709 // methylosome // inferred from direct assay /// 0034715 // pICln-Sm protein complex // inferred from direct assay /// 0034719 // SMN-Sm protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 212.47 </td> <td> 1097.56 </td> <td> 8.51 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218026_at </td> <td> 218026_at </td> <td> NM_014019 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014019.1 /DEF=Homo sapiens HSPC009 protein (HSPC009), mRNA. /FEA=mRNA /GEN=HSPC009 /PROD=HSPC009 protein /DB_XREF=gi:7661731 /UG=Hs.16059 HSPC009 protein /FL=gb:BC002698.1 gb:AF070665.1 gb:NM_014019.1 </td> <td> NM_014019 </td> <td> cytochrome c oxidase assembly factor 3 </td> <td> COA3 </td> <td> 28958 </td> <td> NM_001040431 </td> <td> 0033617 // mitochondrial respiratory chain complex IV assembly // inferred from mutant phenotype /// 0070131 // positive regulation of mitochondrial translation // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031305 // integral component of mitochondrial inner membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 145.85 </td> <td> 352.50 </td> <td> 8.51 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201968_s_at </td> <td> 201968_s_at </td> <td> NM_002633 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002633.1 /DEF=Homo sapiens phosphoglucomutase 1 (PGM1), mRNA. /FEA=mRNA /GEN=PGM1 /PROD=phosphoglucomutase 1 /DB_XREF=gi:4505764 /UG=Hs.1869 phosphoglucomutase 1 /FL=gb:BC001756.1 gb:M83088.1 gb:NM_002633.1 </td> <td> NM_002633 </td> <td> phosphoglucomutase 1 </td> <td> PGM1 </td> <td> 5236 </td> <td> NM_001172818 /// NM_001172819 /// NM_002633 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0005978 // glycogen biosynthetic process // not recorded /// 0005978 // glycogen biosynthetic process // traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // non-traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // traceable author statement /// 0019388 // galactose catabolic process // not recorded /// 0019388 // galactose catabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004614 // phosphoglucomutase activity // inferred from direct assay /// 0004614 // phosphoglucomutase activity // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016868 // intramolecular transferase activity, phosphotransferases // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -126.85 </td> <td> 175.47 </td> <td> -8.51 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 210014_x_at </td> <td> 210014_x_at </td> <td> AF023266 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF023266.1 /DEF=Homo sapiens NAD+-specific isocitrate dehydrogenase beta subunit isoform B mRNA, nuclear gene encoding mitochondrial product, complete cds.  /FEA=mRNA /PROD=NAD+-specific isocitrate dehydrogenase betasubunit isoform B /DB_XREF=gi:4103447 /UG=Hs.155410 isocitrate dehydrogenase 3 (NAD+) beta /FL=gb:AF023266.1 </td> <td> AF023266 </td> <td> isocitrate dehydrogenase 3 (NAD+) beta </td> <td> IDH3B </td> <td> 3420 </td> <td> NM_001258384 /// NM_006899 /// NM_174855 /// NM_174856 /// XM_005260716 </td> <td> 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006102 // isocitrate metabolic process // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from electronic annotation /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004449 // isocitrate dehydrogenase (NAD+) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 107.95 </td> <td> 270.15 </td> <td> 8.50 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203925_at </td> <td> 203925_at </td> <td> NM_002061 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002061.1 /DEF=Homo sapiens glutamate-cysteine ligase, modifier subunit (GCLM), mRNA.  /FEA=mRNA /GEN=GCLM /PROD=glutamate-cysteine ligase regulatory protein /DB_XREF=gi:4504010 /UG=Hs.89709 glutamate-cysteine ligase, modifier subunit /FL=gb:NM_002061.1 gb:L35546.1 </td> <td> NM_002061 </td> <td> glutamate-cysteine ligase, modifier subunit </td> <td> GCLM </td> <td> 2730 </td> <td> NM_002061 /// XM_005270754 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006534 // cysteine metabolic process // inferred from electronic annotation /// 0006536 // glutamate metabolic process // inferred from direct assay /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from direct assay /// 0006750 // glutathione biosynthetic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from mutant phenotype /// 0006750 // glutathione biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006979 // response to oxidative stress // inferred from direct assay /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0035229 // positive regulation of glutamate-cysteine ligase activity // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050880 // regulation of blood vessel size // inferred from mutant phenotype /// 0051409 // response to nitrosative stress // inferred from electronic annotation /// 0051900 // regulation of mitochondrial depolarization // inferred from electronic annotation /// 1901687 // glutathione derivative biosynthetic process // traceable author statement /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0017109 // glutamate-cysteine ligase complex // inferred from electronic annotation </td> <td> 0004357 // glutamate-cysteine ligase activity // inferred from direct assay /// 0004357 // glutamate-cysteine ligase activity // inferred from mutant phenotype /// 0016874 // ligase activity // inferred from electronic annotation /// 0035226 // glutamate-cysteine ligase catalytic subunit binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -370.35 </td> <td> 491.98 </td> <td> -8.50 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209716_at </td> <td> 209716_at </td> <td> M37435 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M37435.1 /DEF=Human macrophage-specific colony-stimulating factor (CSF-1) mRNA, complete cds.  /FEA=mRNA /GEN=CSF1 /DB_XREF=gi:181134 /UG=Hs.173894 colony stimulating factor 1 (macrophage) /FL=gb:M37435.1 gb:M64592.1 </td> <td> M37435 </td> <td> colony stimulating factor 1 (macrophage) </td> <td> CSF1 </td> <td> 1435 </td> <td> NM_000757 /// NM_172210 /// NM_172211 /// NM_172212 </td> <td> 0001503 // ossification // inferred from electronic annotation /// 0001954 // positive regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0002158 // osteoclast proliferation // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0003006 // developmental process involved in reproduction // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010743 // regulation of macrophage derived foam cell differentiation // non-traceable author statement /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from direct assay /// 0030097 // hemopoiesis // non-traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0030225 // macrophage differentiation // traceable author statement /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0032270 // positive regulation of cellular protein metabolic process // inferred from direct assay /// 0032946 // positive regulation of mononuclear cell proliferation // inferred from direct assay /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042117 // monocyte activation // non-traceable author statement /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042488 // positive regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045651 // positive regulation of macrophage differentiation // inferred from direct assay /// 0045657 // positive regulation of monocyte differentiation // inferred from sequence or structural similarity /// 0045672 // positive regulation of osteoclast differentiation // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from sequence or structural similarity /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060611 // mammary gland fat development // inferred from electronic annotation /// 0060763 // mammary duct terminal end bud growth // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005125 // cytokine activity // inferred from direct assay /// 0005157 // macrophage colony-stimulating factor receptor binding // inferred from sequence or structural similarity /// 0005157 // macrophage colony-stimulating factor receptor binding // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> -208.62 </td> <td> 146.49 </td> <td> -8.50 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201170_s_at </td> <td> 201170_s_at </td> <td> NM_003670 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003670.1 /DEF=Homo sapiens basic helix-loop-helix domain containing, class B, 2 (BHLHB2), mRNA.  /FEA=mRNA /GEN=BHLHB2 /PROD=differentiated embryo chondrocyte expressed gene1 /DB_XREF=gi:4503298 /UG=Hs.171825 basic helix-loop-helix domain containing, class B, 2 /FL=gb:AB004066.1 gb:NM_003670.1 </td> <td> NM_003670 </td> <td> basic helix-loop-helix family, member e40 </td> <td> BHLHE40 </td> <td> 8553 </td> <td> NM_003670 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0032922 // circadian regulation of gene expression // inferred from direct assay /// 0043153 // entrainment of circadian clock by photoperiod // inferred from sequence or structural similarity /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from sequence or structural similarity /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043426 // MRF binding // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from direct assay </td> <td> -311.95 </td> <td> 366.80 </td> <td> -8.49 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213726_x_at </td> <td> 213726_x_at </td> <td> AA515698 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA515698 /FEA=EST /DB_XREF=gi:2255298 /DB_XREF=est:nf66f09.s1 /CLONE=IMAGE:924905 /UG=Hs.251653 tubulin, beta, 2 </td> <td> AA515698 </td> <td> tubulin, beta 4B class IVb </td> <td> TUBB4B </td> <td> 10383 </td> <td> NM_006088 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0042267 // natural killer cell mediated cytotoxicity // non-traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0042288 // MHC class I protein binding // traceable author statement /// 0051082 // unfolded protein binding // non-traceable author statement </td> <td> 701.42 </td> <td> 1428.56 </td> <td> 8.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 205572_at </td> <td> 205572_at </td> <td> NM_001147 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001147.1 /DEF=Homo sapiens angiopoietin 2 (ANGPT2), mRNA. /FEA=mRNA /GEN=ANGPT2 /PROD=angiopoietin 2 /DB_XREF=gi:4557314 /UG=Hs.115181 angiopoietin 2 /FL=gb:AF004327.1 gb:NM_001147.1 gb:AB009865.1 </td> <td> NM_001147 </td> <td> angiopoietin 2 </td> <td> ANGPT2 </td> <td> 285 </td> <td> NM_001118887 /// NM_001118888 /// NM_001147 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009314 // response to radiation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0010812 // negative regulation of cell-substrate adhesion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0048014 // Tie signaling pathway // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0050928 // negative regulation of positive chemotaxis // inferred from direct assay /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0072012 // glomerulus vasculature development // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 91.38 </td> <td> 162.01 </td> <td> 8.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200895_s_at </td> <td> 200895_s_at </td> <td> NM_002014 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002014.1 /DEF=Homo sapiens FK506-binding protein 4 (59kD) (FKBP4), mRNA. /FEA=mRNA /GEN=FKBP4 /PROD=FK506-binding protein 4 (59kD) /DB_XREF=gi:4503728 /UG=Hs.848 FK506-binding protein 4 (59kD) /FL=gb:BC001786.1 gb:M88279.1 gb:NM_002014.1 </td> <td> NM_002014 </td> <td> FK506 binding protein 4, 59kDa </td> <td> FKBP4 </td> <td> 2288 </td> <td> NM_002014 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0006463 // steroid hormone receptor complex assembly // inferred from electronic annotation /// 0006825 // copper ion transport // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from sequence or structural similarity /// 0018208 // peptidyl-proline modification //  /// 0030521 // androgen receptor signaling pathway // inferred from electronic annotation /// 0030850 // prostate gland development // inferred from electronic annotation /// 0031111 // negative regulation of microtubule polymerization or depolymerization // inferred from sequence or structural similarity /// 0031115 // negative regulation of microtubule polymerization // inferred from electronic annotation /// 0031503 // protein complex localization // inferred from electronic annotation /// 0046661 // male sex differentiation // inferred from electronic annotation /// 0048608 // reproductive structure development // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // inferred from direct assay </td> <td> 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // not recorded /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane //  /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044295 // axonal growth cone // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0005528 // FK506 binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0030674 // protein binding, bridging // traceable author statement /// 0031072 // heat shock protein binding // inferred from physical interaction /// 0032767 // copper-dependent protein binding // inferred from electronic annotation /// 0035259 // glucocorticoid receptor binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048156 // tau protein binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation </td> <td> 101.65 </td> <td> 167.95 </td> <td> 8.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209025_s_at </td> <td> 209025_s_at </td> <td> AF037448 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF037448.1 /DEF=Homo sapiens RRM RNA binding protein Gry-rbp (GRY-RBP) mRNA, complete cds.  /FEA=mRNA /GEN=GRY-RBP /PROD=Gry-rbp /DB_XREF=gi:3037012 /UG=Hs.155489 NS1-associated protein 1 /FL=gb:AF037448.1 </td> <td> AF037448 </td> <td> synaptotagmin binding, cytoplasmic RNA interacting protein </td> <td> SYNCRIP </td> <td> 10492 </td> <td> NM_001159673 /// NM_001159674 /// NM_001159675 /// NM_001159676 /// NM_001159677 /// NM_001253771 /// NM_006372 /// XM_005248635 /// XM_005248636 /// XM_005248637 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype /// 0071346 // cellular response to interferon-gamma // inferred from direct assay </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from sequence or structural similarity /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 176.63 </td> <td> 374.44 </td> <td> 8.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212215_at </td> <td> 212215_at </td> <td> AB007896 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB007896.1 /DEF=Homo sapiens KIAA0436 mRNA, partial cds. /FEA=mRNA /GEN=KIAA0436 /DB_XREF=gi:2662152 /UG=Hs.110 putative L-type neutral amino acid transporter </td> <td> AB007896 </td> <td> prolyl endopeptidase-like </td> <td> PREPL </td> <td> 9581 </td> <td> NM_001042385 /// NM_001042386 /// NM_001171603 /// NM_001171606 /// NM_001171613 /// NM_001171617 /// NM_006036 /// XM_005264653 /// XM_005264654 /// XM_005264655 /// XM_005264657 /// XM_005264658 /// XM_005264659 /// XM_005264660 /// XM_006712151 /// XM_006712152 </td> <td> 0006508 // proteolysis // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation </td> <td> 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0070008 // serine-type exopeptidase activity // inferred from electronic annotation </td> <td> 86.03 </td> <td> 71.99 </td> <td> 8.43 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200813_s_at </td> <td> 200813_s_at </td> <td> BE256969 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE256969 /FEA=EST /DB_XREF=gi:9127437 /DB_XREF=est:601112157F1 /CLONE=IMAGE:3352623 /UG=Hs.77318 platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit (45kD) /FL=gb:L13385.1 gb:L13386.1 gb:NM_000430.2 </td> <td> BE256969 </td> <td> platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) </td> <td> PAFAH1B1 </td> <td> 5048 </td> <td> NM_000430 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000132 // establishment of mitotic spindle orientation // inferred from mutant phenotype /// 0000226 // microtubule cytoskeleton organization // inferred from sequence or structural similarity /// 0000278 // mitotic cell cycle // traceable author statement /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001675 // acrosome assembly // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from mutant phenotype /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0001961 // positive regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0008090 // retrograde axon cargo transport // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from mutant phenotype /// 0009306 // protein secretion // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0017145 // stem cell division // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from sequence or structural similarity /// 0021540 // corpus callosum morphogenesis // inferred from mutant phenotype /// 0021766 // hippocampus development // inferred from sequence or structural similarity /// 0021819 // layer formation in cerebral cortex // inferred from sequence or structural similarity /// 0021895 // cerebral cortex neuron differentiation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0032319 // regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0036035 // osteoclast development // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation /// 0046469 // platelet activating factor metabolic process // inferred from sequence or structural similarity /// 0047496 // vesicle transport along microtubule // inferred from sequence or structural similarity /// 0048854 // brain morphogenesis // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from mutant phenotype /// 0051081 // nuclear envelope disassembly // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051660 // establishment of centrosome localization // inferred from electronic annotation </td> <td> 0000235 // astral microtubule // inferred from direct assay /// 0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from sequence or structural similarity /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008201 // heparin binding // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0034452 // dynactin binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0043274 // phospholipase binding // inferred from sequence or structural similarity /// 0045502 // dynein binding // inferred from direct assay /// 0045505 // dynein intermediate chain binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from sequence or structural similarity </td> <td> 85.92 </td> <td> 183.26 </td> <td> 8.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202770_s_at </td> <td> 202770_s_at </td> <td> NM_004354 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004354.1 /DEF=Homo sapiens cyclin G2 (CCNG2), mRNA. /FEA=mRNA /GEN=CCNG2 /PROD=cyclin G2 /DB_XREF=gi:4757935 /UG=Hs.79069 cyclin G2 /FL=gb:U47414.1 gb:NM_004354.1 </td> <td> NM_004354 </td> <td> cyclin G2 </td> <td> CCNG2 </td> <td> 901 </td> <td> NM_004354 </td> <td> 0000075 // cell cycle checkpoint // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td>  </td> <td> -147.00 </td> <td> 115.30 </td> <td> -8.40 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 210891_s_at </td> <td> 210891_s_at </td> <td> AF035737 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF035737.1 /DEF=Homo sapiens general transcription factor 2-I (GTF2I) mRNA, complete cds.  /FEA=mRNA /GEN=GTF2I /PROD=general transcription factor 2-I; alternativesplice product /DB_XREF=gi:2827179 /UG=Hs.278589 general transcription factor II, i /FL=gb:AF035737.1 </td> <td> AF035737 </td> <td> general transcription factor IIi /// general transcription factor IIi, pseudogene 1 /// general transcription factor II, i, pseudogene </td> <td> GTF2I /// GTF2IP1 /// LOC100093631 </td> <td> 2969 /// 2970 /// 100093631 </td> <td> NM_001163636 /// NM_001280800 /// NM_001518 /// NM_032999 /// NM_033000 /// NM_033001 /// NR_002206 /// NR_003580 /// XM_005250291 /// XM_005250296 /// XM_006715939 /// XM_006715940 /// XM_006715941 /// XM_006715942 /// XM_006715943 /// XM_006715944 /// XM_006715945 /// XM_006715946 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0051481 // negative regulation of cytosolic calcium ion concentration // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0051019 // mitogen-activated protein kinase binding // inferred from electronic annotation </td> <td> 275.92 </td> <td> 336.44 </td> <td> 8.38 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202133_at </td> <td> 202133_at </td> <td> BF674349 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF674349 /FEA=EST /DB_XREF=gi:11948244 /DB_XREF=est:602137094F1 /CLONE=IMAGE:4273679 /UG=Hs.24341 transcriptional co-activator with PDZ-binding motif (TAZ) /FL=gb:NM_015472.1 </td> <td> BF674349 </td> <td> WW domain containing transcription regulator 1 </td> <td> WWTR1 </td> <td> 25937 </td> <td> NM_001168278 /// NM_001168280 /// NM_015472 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0017145 // stem cell division // inferred from direct assay /// 0032835 // glomerulus development // inferred from electronic annotation /// 0035329 // hippo signaling // inferred from direct assay /// 0035329 // hippo signaling // traceable author statement /// 0035414 // negative regulation of catenin import into nucleus // inferred from mutant phenotype /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0060271 // cilium morphogenesis // inferred from electronic annotation /// 0060390 // regulation of SMAD protein import into nucleus // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation </td> <td> 324.18 </td> <td> 600.96 </td> <td> 8.36 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204326_x_at </td> <td> 204326_x_at </td> <td> NM_002450 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002450.1 /DEF=Homo sapiens metallothionein 1L (MT1L), mRNA. /FEA=mRNA /GEN=MT1L /PROD=metallothionein 1L /DB_XREF=gi:4505270 /UG=Hs.94360 metallothionein 1L /FL=gb:NM_002450.1 </td> <td> NM_002450 </td> <td> metallothionein 1X </td> <td> MT1X </td> <td> 4501 </td> <td> NM_005952 </td> <td> 0010038 // response to metal ion // traceable author statement /// 0036018 // cellular response to erythropoietin // inferred from expression pattern /// 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0071276 // cellular response to cadmium ion // inferred from expression pattern /// 0071294 // cellular response to zinc ion // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // traceable author statement </td> <td> -390.75 </td> <td> 724.20 </td> <td> -8.36 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 53968_at </td> <td> 53968_at </td> <td> AI869988 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI869988:wl63e02.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2429594 /clone_end=3' /gb=AI869988 /gi=5543956 /ug=Hs.6259 /len=541 </td> <td> AI869988 </td> <td> integrator complex subunit 5 </td> <td> INTS5 </td> <td> 80789 </td> <td> NM_030628 </td> <td> 0016180 // snRNA processing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032039 // integrator complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 74.10 </td> <td> 92.22 </td> <td> 8.36 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202766_s_at </td> <td> 202766_s_at </td> <td> NM_000138 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000138.1 /DEF=Homo sapiens fibrillin 1 (Marfan syndrome) (FBN1), mRNA. /FEA=mRNA /GEN=FBN1 /PROD=fibrillin 1 /DB_XREF=gi:4557590 /UG=Hs.750 fibrillin 1 (Marfan syndrome) /FL=gb:L13923.1 gb:NM_000138.1 </td> <td> NM_000138 </td> <td> fibrillin 1 </td> <td> FBN1 </td> <td> 2200 </td> <td> NM_000138 </td> <td> 0001501 // skeletal system development // inferred from mutant phenotype /// 0001822 // kidney development // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0035582 // sequestering of BMP in extracellular matrix // inferred from sequence or structural similarity /// 0035583 // sequestering of TGFbeta in extracellular matrix // inferred from sequence or structural similarity </td> <td> 0001527 // microfibril // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from direct assay /// 0005604 // basement membrane // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005201 // extracellular matrix structural constituent // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> -189.42 </td> <td> 359.79 </td> <td> -8.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202976_s_at </td> <td> 202976_s_at </td> <td> NM_014899 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014899.1 /DEF=Homo sapiens KIAA0878 protein (KIAA0878), mRNA. /FEA=mRNA /GEN=KIAA0878 /PROD=KIAA0878 protein /DB_XREF=gi:7662355 /UG=Hs.188006 KIAA0878 protein /FL=gb:AB020685.1 gb:NM_014899.1 </td> <td> NM_014899 </td> <td> Rho-related BTB domain containing 3 </td> <td> RHOBTB3 </td> <td> 22836 </td> <td> NM_014899 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017137 // Rab GTPase binding // inferred from physical interaction </td> <td> 91.72 </td> <td> 111.61 </td> <td> 8.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202126_at </td> <td> 202126_at </td> <td> AA156948 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA156948 /FEA=EST /DB_XREF=gi:1728563 /DB_XREF=est:zl19f02.s1 /CLONE=IMAGE:502395 /UG=Hs.198891 serinethreonine-protein kinase PRP4 homolog /FL=gb:U48736.1 gb:NM_003913.1 </td> <td> AA156948 </td> <td> pre-mRNA processing factor 4B </td> <td> PRPF4B </td> <td> 8899 </td> <td> NM_003913 /// NM_176800 /// XM_006715238 /// XR_241936 /// XR_241940 /// XR_241944 /// XR_241945 /// XR_241947 /// XR_241948 /// XR_241949 /// XR_427838 /// XR_427839 /// XR_427840 /// XR_427841 /// XR_427842 /// XR_427843 /// XR_427844 /// XR_427845 /// XR_427846 /// XR_427847 /// XR_427848 /// XR_427849 /// XR_427850 /// XR_427851 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 118.85 </td> <td> 115.28 </td> <td> 8.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200988_s_at </td> <td> 200988_s_at </td> <td> NM_005789 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005789.1 /DEF=Homo sapiens proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) (PSME3), mRNA.  /FEA=mRNA /GEN=PSME3 /PROD=proteasome (prosome, macropain) activatorsubunit 3 (PA28 gamma; Ki) /DB_XREF=gi:5031996 /UG=Hs.152978 proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) /FL=gb:NM_005789.1 gb:U11292.1 </td> <td> NM_005789 </td> <td> proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) </td> <td> PSME3 </td> <td> 10197 </td> <td> NM_001267045 /// NM_005789 /// NM_176863 /// NR_049772 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010950 // positive regulation of endopeptidase activity // inferred from direct assay /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0061136 // regulation of proteasomal protein catabolic process // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008537 // proteasome activator complex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0002039 // p53 binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0061133 // endopeptidase activator activity // inferred from direct assay /// 0097371 // MDM2/MDM4 family protein binding // inferred from direct assay </td> <td> 80.40 </td> <td> 67.42 </td> <td> 8.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202613_at </td> <td> 202613_at </td> <td> NM_001905 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001905.1 /DEF=Homo sapiens CTP synthase (CTPS), mRNA. /FEA=mRNA /GEN=CTPS /PROD=CTP synthase /DB_XREF=gi:4503132 /UG=Hs.251871 CTP synthase /FL=gb:NM_001905.1 </td> <td> NM_001905 </td> <td> CTP synthase 1 </td> <td> CTPS1 </td> <td> 1503 </td> <td> NM_001905 /// XM_005270536 /// XM_006710390 /// XM_006710391 /// XR_426589 </td> <td> 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006221 // pyrimidine nucleotide biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from direct assay /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0042493 // response to drug // traceable author statement /// 0044210 // 'de novo' CTP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003883 // CTP synthase activity // not recorded /// 0003883 // CTP synthase activity // inferred from direct assay /// 0003883 // CTP synthase activity // inferred from genetic interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> 96.25 </td> <td> 121.35 </td> <td> 8.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201169_s_at </td> <td> 201169_s_at </td> <td> BG326045 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG326045 /FEA=EST /DB_XREF=gi:13132482 /DB_XREF=est:602424821F1 /CLONE=IMAGE:4562789 /UG=Hs.171825 basic helix-loop-helix domain containing, class B, 2 /FL=gb:AB004066.1 gb:NM_003670.1 </td> <td> BG326045 </td> <td> basic helix-loop-helix family, member e40 </td> <td> BHLHE40 </td> <td> 8553 </td> <td> NM_003670 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0032922 // circadian regulation of gene expression // inferred from direct assay /// 0043153 // entrainment of circadian clock by photoperiod // inferred from sequence or structural similarity /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from sequence or structural similarity /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043426 // MRF binding // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from direct assay </td> <td> -94.38 </td> <td> 84.94 </td> <td> -8.32 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204521_at </td> <td> 204521_at </td> <td> NM_013300 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013300.1 /DEF=Homo sapiens protein predicted by clone 23733 (HSU79274), mRNA. /FEA=mRNA /GEN=HSU79274 /PROD=protein predicted by clone 23733 /DB_XREF=gi:9558740 /UG=Hs.150555 protein predicted by clone 23733 /FL=gb:U79274.1 gb:NM_013300.1 </td> <td> NM_013300 </td> <td> family with sequence similarity 216, member A </td> <td> FAM216A </td> <td> 29902 </td> <td> NM_013300 /// XM_005253875 </td> <td>  </td> <td>  </td> <td>  </td> <td> 66.60 </td> <td> 102.38 </td> <td> 8.30 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 215171_s_at </td> <td> 215171_s_at </td> <td> AK023063 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK023063.1 /DEF=Homo sapiens cDNA FLJ13001 fis, clone NT2RP3000341, highly similar to Homo sapiens mitochondrial inner membrane preprotein translocase Tim17a mRNA, nuclear gene encoding mitochondrial protein.  /FEA=mRNA /DB_XREF=gi:10434808 /UG=Hs.20716 translocase of inner mitochondrial membrane 17 (yeast) homolog A </td> <td> AK023063 </td> <td> translocase of inner mitochondrial membrane 17 homolog A (yeast) </td> <td> TIMM17A </td> <td> 10440 </td> <td> NM_006335 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071806 // protein transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031305 // integral component of mitochondrial inner membrane // inferred from direct assay </td> <td> 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation </td> <td> 240.10 </td> <td> 491.48 </td> <td> 8.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212398_at </td> <td> 212398_at </td> <td> AI057093 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI057093 /FEA=EST /DB_XREF=gi:3330969 /DB_XREF=est:oz23e12.x1 /CLONE=IMAGE:1676206 /UG=Hs.263671 Homo sapiens mRNA; cDNA DKFZp434I0812 (from clone DKFZp434I0812); partial cds </td> <td> AI057093 </td> <td> radixin </td> <td> RDX </td> <td> 5962 </td> <td> NM_001260492 /// NM_001260493 /// NM_001260494 /// NM_001260495 /// NM_001260496 /// NM_002906 </td> <td> 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from genetic interaction /// 0030033 // microvillus assembly // inferred from electronic annotation /// 0045176 // apical protein localization // inferred from electronic annotation /// 0051693 // actin filament capping // inferred from electronic annotation /// 0061028 // establishment of endothelial barrier // inferred from genetic interaction </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005902 // microvillus // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032420 // stereocilium // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0051286 // cell tip // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -145.77 </td> <td> 308.14 </td> <td> -8.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212787_at </td> <td> 212787_at </td> <td> AI952986 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI952986 /FEA=EST /DB_XREF=gi:5745296 /DB_XREF=est:wp98b10.x1 /CLONE=IMAGE:2469787 /UG=Hs.159471 ZAP3 protein </td> <td> AI952986 </td> <td> YLP motif containing 1 </td> <td> YLPM1 </td> <td> 56252 </td> <td> NM_019589 /// XM_005267860 /// XR_245704 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0032204 // regulation of telomere maintenance // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 116.80 </td> <td> 199.83 </td> <td> 8.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203045_at </td> <td> 203045_at </td> <td> NM_004148 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004148.1 /DEF=Homo sapiens ninjurin 1 (NINJ1), mRNA. /FEA=mRNA /GEN=NINJ1 /PROD=ninjurin 1 /DB_XREF=gi:4758809 /UG=Hs.11342 ninjurin 1 /FL=gb:BC004440.1 gb:U72661.1 gb:U91512.1 gb:NM_004148.1 </td> <td> NM_004148 </td> <td> ninjurin 1 </td> <td> NINJ1 </td> <td> 4814 </td> <td> NM_004148 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0042246 // tissue regeneration // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -146.52 </td> <td> 163.81 </td> <td> -8.22 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200816_s_at </td> <td> 200816_s_at </td> <td> NM_000430 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000430.2 /DEF=Homo sapiens platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit (45kD) (PAFAH1B1), mRNA.  /FEA=mRNA /GEN=PAFAH1B1 /PROD=platelet-activating factor acetylhydrolase,isoform Ib, alpha subunit (45kD) /DB_XREF=gi:6031206 /UG=Hs.77318 platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit (45kD) /FL=gb:L13385.1 gb:L13386.1 gb:NM_000430.2 </td> <td> NM_000430 </td> <td> platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) </td> <td> PAFAH1B1 </td> <td> 5048 </td> <td> NM_000430 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000132 // establishment of mitotic spindle orientation // inferred from mutant phenotype /// 0000226 // microtubule cytoskeleton organization // inferred from sequence or structural similarity /// 0000278 // mitotic cell cycle // traceable author statement /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001675 // acrosome assembly // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from mutant phenotype /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0001961 // positive regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0008090 // retrograde axon cargo transport // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from mutant phenotype /// 0009306 // protein secretion // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0017145 // stem cell division // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from sequence or structural similarity /// 0021540 // corpus callosum morphogenesis // inferred from mutant phenotype /// 0021766 // hippocampus development // inferred from sequence or structural similarity /// 0021819 // layer formation in cerebral cortex // inferred from sequence or structural similarity /// 0021895 // cerebral cortex neuron differentiation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0032319 // regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0036035 // osteoclast development // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation /// 0046469 // platelet activating factor metabolic process // inferred from sequence or structural similarity /// 0047496 // vesicle transport along microtubule // inferred from sequence or structural similarity /// 0048854 // brain morphogenesis // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from mutant phenotype /// 0051081 // nuclear envelope disassembly // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051660 // establishment of centrosome localization // inferred from electronic annotation </td> <td> 0000235 // astral microtubule // inferred from direct assay /// 0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from sequence or structural similarity /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008201 // heparin binding // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0034452 // dynactin binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0043274 // phospholipase binding // inferred from sequence or structural similarity /// 0045502 // dynein binding // inferred from direct assay /// 0045505 // dynein intermediate chain binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from sequence or structural similarity </td> <td> 236.30 </td> <td> 308.20 </td> <td> 8.22 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 208712_at </td> <td> 208712_at </td> <td> M73554 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M73554.1 /DEF=Human bcl-1 mRNA, complete CDS. /FEA=mRNA /GEN=bcl-1 /PROD=bcl-1 /DB_XREF=gi:179364 /UG=Hs.82932 cyclin D1 (PRAD1: parathyroid adenomatosis 1) /FL=gb:BC000076.1 gb:M73554.1 </td> <td> M73554 </td> <td> cyclin D1 </td> <td> CCND1 </td> <td> 595 </td> <td> NM_053056 /// XM_006718653 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0000320 // re-entry into mitotic cell cycle // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007595 // lactation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from electronic annotation /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010971 // positive regulation of G2/M transition of mitotic cell cycle // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from electronic annotation /// 0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031571 // mitotic G1 DNA damage checkpoint // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0033327 // Leydig cell differentiation // inferred from electronic annotation /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0033601 // positive regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from expression pattern /// 0043627 // response to estrogen // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045737 // positive regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation /// 0070141 // response to UV-A // inferred from direct assay /// 0071157 // negative regulation of cell cycle arrest // inferred from direct assay /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 2000045 // regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation </td> <td> 0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016538 // cyclin-dependent protein serine/threonine kinase regulator activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from direct assay </td> <td> 194.03 </td> <td> 235.34 </td> <td> 8.22 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 206429_at </td> <td> 206429_at </td> <td> NM_005242 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005242.2 /DEF=Homo sapiens coagulation factor II (thrombin) receptor-like 1 (F2RL1), mRNA.  /FEA=mRNA /GEN=F2RL1 /PROD=coagulation factor II (thrombin) receptor-like 1precursor /DB_XREF=gi:8051581 /UG=Hs.154299 coagulation factor II (thrombin) receptor-like 1 /FL=gb:U34038.1 gb:NM_005242.2 </td> <td> NM_005242 </td> <td> coagulation factor II (thrombin) receptor-like 1 </td> <td> F2RL1 </td> <td> 2150 </td> <td> NM_005242 </td> <td> 0002286 // T cell activation involved in immune response // inferred from sequence or structural similarity /// 0002376 // immune system process // inferred from electronic annotation /// 0002690 // positive regulation of leukocyte chemotaxis // inferred from direct assay /// 0002741 // positive regulation of cytokine secretion involved in immune response // inferred from direct assay /// 0003104 // positive regulation of glomerular filtration // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from direct assay /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from sequence or structural similarity /// 0007596 // blood coagulation // inferred from electronic annotation /// 0010804 // negative regulation of tumor necrosis factor-mediated signaling pathway // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from sequence or structural similarity /// 0030193 // regulation of blood coagulation // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030836 // positive regulation of actin filament depolymerization // inferred from direct assay /// 0031274 // positive regulation of pseudopodium assembly // inferred from sequence or structural similarity /// 0032930 // positive regulation of superoxide anion generation // inferred from direct assay /// 0034137 // positive regulation of toll-like receptor 2 signaling pathway // inferred from mutant phenotype /// 0034140 // negative regulation of toll-like receptor 3 signaling pathway // inferred from mutant phenotype /// 0034141 // positive regulation of toll-like receptor 3 signaling pathway // inferred from mutant phenotype /// 0034145 // positive regulation of toll-like receptor 4 signaling pathway // inferred from direct assay /// 0035025 // positive regulation of Rho protein signal transduction // inferred from mutant phenotype /// 0035025 // positive regulation of Rho protein signal transduction // inferred from sequence or structural similarity /// 0035926 // chemokine (C-C motif) ligand 2 secretion // inferred from direct assay /// 0042119 // neutrophil activation // inferred from direct assay /// 0043122 // regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043311 // positive regulation of eosinophil degranulation // inferred from direct assay /// 0045087 // innate immune response // inferred from electronic annotation /// 0045909 // positive regulation of vasodilation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046329 // negative regulation of JNK cascade // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0050702 // interleukin-1 beta secretion // inferred from direct assay /// 0050900 // leukocyte migration // inferred from direct assay /// 0050921 // positive regulation of chemotaxis // inferred from sequence or structural similarity /// 0050927 // positive regulation of positive chemotaxis // inferred from direct assay /// 0051607 // defense response to virus // inferred from direct assay /// 0060100 // positive regulation of phagocytosis, engulfment // inferred from direct assay /// 0061028 // establishment of endothelial barrier // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070493 // thrombin receptor signaling pathway // inferred from electronic annotation /// 0070661 // leukocyte proliferation // inferred from sequence or structural similarity /// 0070963 // positive regulation of neutrophil mediated killing of gram-negative bacterium // inferred from direct assay /// 0072608 // interleukin-10 secretion // inferred from direct assay /// 0072643 // interferon-gamma secretion // inferred from sequence or structural similarity /// 0090195 // chemokine secretion // inferred from direct assay /// 0090198 // negative regulation of chemokine secretion // inferred from direct assay /// 0097029 // mature dendritic cell differentiation // inferred from direct assay /// 0097029 // mature dendritic cell differentiation // inferred from sequence or structural similarity /// 1900135 // positive regulation of renin secretion into blood stream // inferred from sequence or structural similarity /// 2000484 // positive regulation of interleukin-8 secretion // inferred from direct assay /// 2000778 // positive regulation of interleukin-6 secretion // inferred from direct assay </td> <td> 0005794 // Golgi apparatus // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031143 // pseudopodium // inferred from sequence or structural similarity </td> <td> 0001965 // G-protein alpha-subunit binding // inferred from sequence or structural similarity /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from mutant phenotype /// 0004930 // G-protein coupled receptor activity // inferred from sequence or structural similarity /// 0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015057 // thrombin receptor activity // inferred from electronic annotation /// 0031681 // G-protein beta-subunit binding // inferred from sequence or structural similarity </td> <td> -301.97 </td> <td> 300.59 </td> <td> -8.22 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202361_at </td> <td> 202361_at </td> <td> NM_004922 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004922.1 /DEF=Homo sapiens SEC24 (S. cerevisiae) related gene family, member C (SEC24C), mRNA.  /FEA=mRNA /GEN=SEC24C /PROD=SEC24 (S. cerevisiae) related gene family,member C /DB_XREF=gi:4758633 /UG=Hs.81964 SEC24 (S. cerevisiae) related gene family, member C /FL=gb:NM_004922.1 gb:D38555.1 </td> <td> NM_004922 </td> <td> SEC24 family member C </td> <td> SEC24C </td> <td> 9632 </td> <td> NM_004922 /// NM_198597 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // non-traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation </td> <td> 107.78 </td> <td> 177.96 </td> <td> 8.21 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212828_at </td> <td> 212828_at </td> <td> AA191573 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA191573 /FEA=EST /DB_XREF=gi:1780272 /DB_XREF=est:zp81b09.s1 /CLONE=IMAGE:626585 /UG=Hs.61289 synaptojanin 2 </td> <td> AA191573 </td> <td> synaptojanin 2 </td> <td> SYNJ2 </td> <td> 8871 </td> <td> NM_001178088 /// NM_003898 /// XM_005267197 /// XM_005267198 /// XM_005267199 /// XM_005267200 /// XM_006715591 /// XM_006715592 /// XR_245556 </td> <td> 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046856 // phosphatidylinositol dephosphorylation // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004439 // phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042578 // phosphoric ester hydrolase activity // inferred from electronic annotation </td> <td> -333.90 </td> <td> 500.03 </td> <td> -8.20 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 221493_at </td> <td> 221493_at </td> <td> AL136629 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136629.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564D152 (from clone DKFZp564D152); complete cds.  /FEA=mRNA /GEN=DKFZp564D152 /PROD=hypothetical protein /DB_XREF=gi:12052783 /UG=Hs.278479 TSPY-like /FL=gb:AL136629.1 </td> <td> AL136629 </td> <td> TSPY-like 1 </td> <td> TSPYL1 </td> <td> 7259 </td> <td> NM_003309 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // inferred from electronic annotation /// 0030208 // dermatan sulfate biosynthetic process // inferred from direct assay /// 0030208 // dermatan sulfate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0016853 // isomerase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from direct assay /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from electronic annotation </td> <td> 163.02 </td> <td> 233.86 </td> <td> 8.20 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 215101_s_at </td> <td> 215101_s_at </td> <td> BG166705 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG166705 /FEA=EST /DB_XREF=gi:12673408 /DB_XREF=est:602339217F1 /CLONE=IMAGE:4447013 /UG=Hs.89714 small inducible cytokine subfamily B (Cys-X-Cys), member 5 (epithelial-derived neutrophil-activating peptide 78) </td> <td> BG166705 </td> <td> chemokine (C-X-C motif) ligand 5 </td> <td> CXCL5 </td> <td> 6374 </td> <td> NM_002994 </td> <td> 0006935 // chemotaxis // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0060326 // cell chemotaxis // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from electronic annotation </td> <td> -116.45 </td> <td> 62.95 </td> <td> -8.20 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 221479_s_at </td> <td> 221479_s_at </td> <td> AF060922 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF060922.1 /DEF=Homo sapiens clone 016a05 My020 protein mRNA, complete cds. /FEA=mRNA /PROD=My020 protein /DB_XREF=gi:12001981 /UG=Hs.132955 BCL2adenovirus E1B 19kD-interacting protein 3-like /FL=gb:AF060922.1 gb:AB004788.1 gb:AF067396.1 gb:NM_004331.1 gb:AL132665.1 </td> <td> AF060922 </td> <td> BCL2/adenovirus E1B 19kDa interacting protein 3-like </td> <td> BNIP3L </td> <td> 665 </td> <td> NM_004331 /// XM_005273617 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0051607 // defense response to virus // inferred from direct assay /// 0097345 // mitochondrial outer membrane permeabilization // not recorded </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031224 // intrinsic component of membrane // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay </td> <td> -284.07 </td> <td> 473.89 </td> <td> -8.20 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213508_at </td> <td> 213508_at </td> <td> AA142942 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA142942 /FEA=EST /DB_XREF=gi:1712320 /DB_XREF=est:zl43c04.s1 /CLONE=IMAGE:504678 /UG=Hs.241507 ribosomal protein S6 </td> <td> AA142942 </td> <td> serine palmitoyltransferase, small subunit A </td> <td> SPTSSA </td> <td> 171546 </td> <td> NM_138288 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0017059 // serine C-palmitoyltransferase complex // inferred from direct assay </td> <td> 0004758 // serine C-palmitoyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 69.15 </td> <td> 75.17 </td> <td> 8.20 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209797_at </td> <td> 209797_at </td> <td> BC001027 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001027.1 /DEF=Homo sapiens, transmembrane protein 4, clone MGC:1545, mRNA, complete cds.  /FEA=mRNA /PROD=transmembrane protein 4 /DB_XREF=gi:12654402 /UG=Hs.8752 transmembrane protein 4 /FL=gb:BC001027.1 gb:AF186113.1 </td> <td> BC001027 </td> <td> canopy FGF signaling regulator 2 </td> <td> CNPY2 </td> <td> 10330 </td> <td> NM_001190991 /// NM_014255 </td> <td> 0010629 // negative regulation of gene expression // inferred from sequence or structural similarity /// 0010988 // regulation of low-density lipoprotein particle clearance // inferred from sequence or structural similarity /// 0045716 // positive regulation of low-density lipoprotein particle receptor biosynthetic process // inferred from sequence or structural similarity </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 72.38 </td> <td> 98.24 </td> <td> 8.20 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213476_x_at </td> <td> 213476_x_at </td> <td> AL565749 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL565749 /FEA=EST /DB_XREF=gi:12917434 /DB_XREF=est:AL565749 /CLONE=CS0DF007YJ03 (3 prime) /UG=Hs.159154 tubulin, beta, 4 </td> <td> AL565749 </td> <td> tubulin, beta 3 class III </td> <td> TUBB3 </td> <td> 10381 </td> <td> NM_001197181 /// NM_006086 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // inferred from mutant phenotype /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation </td> <td> 380.62 </td> <td> 1041.46 </td> <td> 8.20 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204779_s_at </td> <td> 204779_s_at </td> <td> NM_004502 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004502.1 /DEF=Homo sapiens homeo box B7 (HOXB7), mRNA. /FEA=mRNA /GEN=HOXB7 /PROD=homeo box B7 /DB_XREF=gi:4758551 /UG=Hs.819 homeo box B7 /FL=gb:M16937.1 gb:NM_004502.1 </td> <td> NM_004502 </td> <td> homeobox B7 </td> <td> HOXB7 </td> <td> 3217 </td> <td> NM_004502 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0007275 // multicellular organismal development // non-traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0030099 // myeloid cell differentiation // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 102.60 </td> <td> 180.30 </td> <td> 8.18 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 214853_s_at </td> <td> 214853_s_at </td> <td> AI091079 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI091079 /FEA=EST /DB_XREF=gi:3430138 /DB_XREF=est:qa53e05.s1 /CLONE=IMAGE:1690496 /UG=Hs.81972 SHC (Src homology 2 domain-containing) transforming protein 1 </td> <td> AI091079 </td> <td> SHC (Src homology 2 domain containing) transforming protein 1 </td> <td> SHC1 </td> <td> 6464 </td> <td> NM_001130040 /// NM_001130041 /// NM_001202859 /// NM_003029 /// NM_183001 /// XM_005245449 /// XM_005245450 /// XM_005245451 /// XM_005245452 </td> <td> 0000165 // MAPK cascade // inferred from direct assay /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0001525 // angiogenesis // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007176 // regulation of epidermal growth factor-activated receptor activity // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // non-traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045740 // positive regulation of DNA replication // inferred from sequence or structural similarity /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050900 // leukocyte migration // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0070435 // Shc-EGFR complex // inferred from sequence or structural similarity </td> <td> 0004713 // protein tyrosine kinase activity // traceable author statement /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // traceable author statement /// 0005154 // epidermal growth factor receptor binding // inferred from sequence or structural similarity /// 0005158 // insulin receptor binding // inferred from physical interaction /// 0005159 // insulin-like growth factor receptor binding // inferred from physical interaction /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // traceable author statement /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction </td> <td> 468.47 </td> <td> 1088.16 </td> <td> 8.17 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 217725_x_at </td> <td> 217725_x_at </td> <td> NM_015640 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015640.1 /DEF=Homo sapiens PAI-1 mRNA-binding protein (PAI-RBP1), mRNA. /FEA=mRNA /GEN=PAI-RBP1 /PROD=PAI-1 mRNA-binding protein /DB_XREF=gi:7661625 /UG=Hs.165998 PAI-1 mRNA-binding protein /FL=gb:AL080119.1 gb:NM_015640.1 </td> <td> NM_015640 </td> <td> SERPINE1 mRNA binding protein 1 </td> <td> SERBP1 </td> <td> 26135 </td> <td> NM_001018067 /// NM_001018068 /// NM_001018069 /// NM_015640 </td> <td> 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 168.20 </td> <td> 606.45 </td> <td> 8.16 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212322_at </td> <td> 212322_at </td> <td> BE999972 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE999972 /FEA=EST /DB_XREF=gi:10700248 /DB_XREF=est:7h15b02.x1 /CLONE=IMAGE:3316011 /UG=Hs.186613 sphingosine-1-phosphate lyase 1 /FL=gb:AF144638.1 </td> <td> BE999972 </td> <td> sphingosine-1-phosphate lyase 1 </td> <td> SGPL1 </td> <td> 8879 </td> <td> NM_003901 /// XM_005270263 /// XM_006718052 /// XM_006718053 </td> <td> 0001553 // luteinization // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from direct assay /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006672 // ceramide metabolic process // inferred from direct assay /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0019752 // carboxylic acid metabolic process // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030149 // sphingolipid catabolic process // non-traceable author statement /// 0033327 // Leydig cell differentiation // inferred from electronic annotation /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0097194 // execution phase of apoptosis // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // non-traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008117 // sphinganine-1-phosphate aldolase activity // inferred from direct assay /// 0008117 // sphinganine-1-phosphate aldolase activity // non-traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation </td> <td> -102.42 </td> <td> 146.24 </td> <td> -8.15 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212075_s_at </td> <td> 212075_s_at </td> <td> AI161318 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI161318 /FEA=EST /DB_XREF=gi:3694562 /DB_XREF=est:qb66g02.x1 /CLONE=IMAGE:1705106 /UG=Hs.155140 casein kinase 2, alpha 1 polypeptide </td> <td> AI161318 </td> <td> casein kinase 2, alpha 1 polypeptide </td> <td> CSNK2A1 </td> <td> 1457 </td> <td> NM_001895 /// NM_177559 /// NM_177560 /// XM_006723548 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0001558 // regulation of cell growth // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from mutant phenotype /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0042127 // regulation of cell proliferation // non-traceable author statement /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // traceable author statement /// 0071174 // mitotic spindle checkpoint // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005956 // protein kinase CK2 complex // traceable author statement /// 0016580 // Sin3 complex // inferred from direct assay /// 0016581 // NuRD complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019888 // protein phosphatase regulator activity // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051879 // Hsp90 protein binding // traceable author statement </td> <td> -87.92 </td> <td> 174.44 </td> <td> -8.13 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204615_x_at </td> <td> 204615_x_at </td> <td> NM_004508 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004508.1 /DEF=Homo sapiens isopentenyl-diphosphate delta isomerase (IDI1), mRNA. /FEA=mRNA /GEN=IDI1 /PROD=isopentenyl-diphosphate delta isomerase /DB_XREF=gi:4758583 /UG=Hs.76038 isopentenyl-diphosphate delta isomerase /FL=gb:NM_004508.1 </td> <td> NM_004508 </td> <td> isopentenyl-diphosphate delta isomerase 1 </td> <td> IDI1 </td> <td> 3422 </td> <td> NM_004508 /// XM_005252445 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from direct assay /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0035634 // response to stilbenoid // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050992 // dimethylallyl diphosphate biosynthetic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0004452 // isopentenyl-diphosphate delta-isomerase activity // inferred from direct assay /// 0004452 // isopentenyl-diphosphate delta-isomerase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 88.05 </td> <td> 112.08 </td> <td> 8.12 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209146_at </td> <td> 209146_at </td> <td> AV704962 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV704962 /FEA=EST /DB_XREF=gi:10722273 /DB_XREF=est:AV704962 /CLONE=ADBALE09 /UG=Hs.239926 sterol-C4-methyl oxidase-like /FL=gb:U60205.1 gb:U93162.1 gb:NM_006745.2 </td> <td> AV704962 </td> <td> methylsterol monooxygenase 1 </td> <td> MSMO1 </td> <td> 6307 </td> <td> NM_001017369 /// NM_006745 /// XM_005263176 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008202 // steroid metabolic process // traceable author statement /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000254 // C-4 methylsterol oxidase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation </td> <td> 203.62 </td> <td> 158.11 </td> <td> 8.12 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 207626_s_at </td> <td> 207626_s_at </td> <td> NM_003046 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003046.1 /DEF=Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 (SLC7A2), mRNA.  /FEA=mRNA /GEN=SLC7A2 /PROD=solute carrier family 7 (cationic amino acidtransporter, y+ system), member 2 /DB_XREF=gi:4507048 /UG=Hs.153985 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 /FL=gb:U76368.1 gb:NM_003046.1 </td> <td> NM_003046 </td> <td> solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 </td> <td> SLC7A2 </td> <td> 6542 </td> <td> NM_001008539 /// NM_001164771 /// NM_003046 /// XM_005273609 /// XM_005273610 /// XM_005273611 /// XM_005273612 /// XM_006716389 </td> <td> 0002537 // nitric oxide production involved in inflammatory response // inferred from electronic annotation /// 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006809 // nitric oxide biosynthetic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0015807 // L-amino acid transport // inferred from electronic annotation /// 0015809 // arginine transport // inferred from electronic annotation /// 0015819 // lysine transport // inferred from electronic annotation /// 0015822 // ornithine transport // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from electronic annotation /// 0043030 // regulation of macrophage activation // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 1902475 // L-alpha-amino acid transmembrane transport // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000064 // L-ornithine transmembrane transporter activity // inferred from electronic annotation /// 0005289 // high affinity arginine transmembrane transporter activity // inferred from electronic annotation /// 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015174 // basic amino acid transmembrane transporter activity // traceable author statement /// 0015179 // L-amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015181 // arginine transmembrane transporter activity // inferred from electronic annotation /// 0015189 // L-lysine transmembrane transporter activity // inferred from electronic annotation </td> <td> -404.90 </td> <td> 235.35 </td> <td> -8.11 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213419_at </td> <td> 213419_at </td> <td> U62325 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U62325.1 /DEF=Human FE65-like protein (hFE65L) mRNA, partial cds. /FEA=mRNA /GEN=hFE65L /PROD=FE65-like protein /DB_XREF=gi:1657751 /UG=Hs.324125 amyloid beta (A4) precursor protein-binding, family B, member 2 (Fe65-like) </td> <td> U62325 </td> <td> amyloid beta (A4) precursor protein-binding, family B, member 2 </td> <td> APBB2 </td> <td> 323 </td> <td> NM_001166050 /// NM_001166051 /// NM_001166052 /// NM_001166053 /// NM_001166054 /// NM_004307 /// NM_173075 /// XM_005248101 /// XM_006714005 /// XM_006714006 /// XM_006714007 /// XM_006714008 /// XM_006714009 /// XM_006714010 /// XM_006714011 /// XM_006714012 </td> <td> 0001764 // neuron migration // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from sequence or structural similarity /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from sequence or structural similarity </td> <td> 0001540 // beta-amyloid binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from sequence or structural similarity </td> <td> -93.87 </td> <td> 127.79 </td> <td> -8.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201471_s_at </td> <td> 201471_s_at </td> <td> NM_003900 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003900.1 /DEF=Homo sapiens sequestosome 1 (SQSTM1), mRNA. /FEA=mRNA /GEN=SQSTM1 /PROD=sequestosome 1 /DB_XREF=gi:4505570 /UG=Hs.182248 sequestosome 1 /FL=gb:U41806.1 gb:BC003139.1 gb:U46751.1 gb:NM_003900.1 </td> <td> NM_003900 </td> <td> sequestosome 1 </td> <td> SQSTM1 </td> <td> 8878 </td> <td> NM_001142298 /// NM_001142299 /// NM_003900 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006914 // autophagy // inferred from mutant phenotype /// 0006914 // autophagy // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0008104 // protein localization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0016236 // macroautophagy // inferred from sequence or structural similarity /// 0016239 // positive regulation of macroautophagy // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043122 // regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0046578 // regulation of Ras protein signal transduction // non-traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0000407 // pre-autophagosomal structure // inferred from electronic annotation /// 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016234 // inclusion body // inferred from direct assay /// 0016235 // aggresome // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0030971 // receptor tyrosine kinase binding // traceable author statement /// 0042169 // SH2 domain binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070530 // K63-linked polyubiquitin binding // inferred from electronic annotation </td> <td> -876.30 </td> <td> 1023.15 </td> <td> -8.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202717_s_at </td> <td> 202717_s_at </td> <td> NM_003903 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003903.1 /DEF=Homo sapiens CDC16 (cell division cycle 16, S. cerevisiae, homolog) (CDC16), mRNA.  /FEA=mRNA /GEN=CDC16 /PROD=CDC16 (cell division cycle 16, S. cerevisiae,homolog) /DB_XREF=gi:4502700 /UG=Hs.1592 CDC16 (cell division cycle 16, S. cerevisiae, homolog) /FL=gb:NM_003903.1 gb:U18291.1 </td> <td> NM_003903 </td> <td> cell division cycle 16 </td> <td> CDC16 </td> <td> 8881 </td> <td> NM_001078645 /// NM_003903 /// XM_005266204 /// XM_005266206 /// XM_006719992 /// XM_006719993 /// XR_245358 /// XR_245359 /// XR_245360 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007088 // regulation of mitosis // traceable author statement /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 104.50 </td> <td> 198.20 </td> <td> 8.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 208972_s_at </td> <td> 208972_s_at </td> <td> AL080089 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL080089.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564L2362 (from clone DKFZp564L2362); complete cds.  /FEA=mRNA /GEN=DKFZp564L2362 /PROD=hypothetical protein /DB_XREF=gi:5262506 /UG=Hs.80986 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 1 /FL=gb:BC004963.1 gb:D13118.1 gb:AL080089.1 </td> <td> AL080089 </td> <td> ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) </td> <td> ATP5G1 </td> <td> 516 </td> <td> NM_001002027 /// NM_005175 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation </td> <td> 87.90 </td> <td> 185.05 </td> <td> 8.09 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 206618_at </td> <td> 206618_at </td> <td> NM_003855 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003855.1 /DEF=Homo sapiens interleukin 18 receptor 1 (IL18R1), mRNA. /FEA=mRNA /GEN=IL18R1 /PROD=interleukin 18 receptor 1 /DB_XREF=gi:4504654 /UG=Hs.159301 interleukin 18 receptor 1 /FL=gb:U43672.1 gb:NM_003855.1 </td> <td> NM_003855 </td> <td> interleukin 18 receptor 1 </td> <td> IL18R1 </td> <td> 8809 </td> <td> NM_001282399 /// NM_003855 /// XM_005264039 /// XM_005264040 /// XM_006712823 </td> <td> 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0030101 // natural killer cell activation // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0035655 // interleukin-18-mediated signaling pathway // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from electronic annotation /// 0045063 // T-helper 1 cell differentiation // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // traceable author statement /// 0004908 // interleukin-1 receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0042008 // interleukin-18 receptor activity // inferred from electronic annotation </td> <td> -149.35 </td> <td> 86.30 </td> <td> -8.09 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209410_s_at </td> <td> 209410_s_at </td> <td> AF000017 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF000017.1 /DEF=Homo sapiens adapter protein (hGrb10zeta) mRNA, complete cds. /FEA=mRNA /GEN=hGrb10zeta /PROD=adapter protein /DB_XREF=gi:2130616 /UG=Hs.81875 growth factor receptor-bound protein 10 /FL=gb:D86962.1 gb:AF000017.1 </td> <td> AF000017 </td> <td> growth factor receptor-bound protein 10 </td> <td> GRB10 </td> <td> 2887 </td> <td> NM_001001549 /// NM_001001550 /// NM_001001555 /// NM_005311 /// XM_005271760 /// XM_005271761 /// XM_005271765 /// XM_005271766 /// XM_005271767 /// XM_006715703 /// XM_006715704 /// XM_006715705 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from direct assay /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0032868 // response to insulin // inferred from sequence or structural similarity /// 0042326 // negative regulation of phosphorylation // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from sequence or structural similarity /// 0045719 // negative regulation of glycogen biosynthetic process // inferred from electronic annotation /// 0045719 // negative regulation of glycogen biosynthetic process // inferred from sequence or structural similarity /// 0046325 // negative regulation of glucose import // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement </td> <td> 0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005158 // insulin receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> -82.70 </td> <td> 162.70 </td> <td> -8.09 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 206571_s_at </td> <td> 206571_s_at </td> <td> NM_004834 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004834.1 /DEF=Homo sapiens mitogen-activated protein kinase kinase kinase kinase 4 (MAP4K4), mRNA.  /FEA=mRNA /GEN=MAP4K4 /PROD=mitogen-activated protein kinase kinase kinasekinase 4 /DB_XREF=gi:4758523 /UG=Hs.3628 mitogen-activated protein kinase kinase kinase kinase 4 /FL=gb:AF096300.1 gb:NM_004834.1 </td> <td> NM_004834 </td> <td> mitogen-activated protein kinase kinase kinase kinase 4 </td> <td> MAP4K4 </td> <td> 9448 </td> <td> NM_001242559 /// NM_001242560 /// NM_004834 /// NM_145686 /// NM_145687 /// XM_005264044 /// XM_005264045 /// XM_005264046 /// XM_005264047 /// XM_005264048 /// XM_005264049 /// XM_005264050 /// XM_005264052 /// XM_005264053 /// XM_005264054 /// XM_005264055 /// XM_005264056 /// XM_005264057 /// XM_005264058 /// XM_005264059 /// XM_005264060 /// XM_005264061 /// XM_005264062 /// XM_005264063 /// XM_005264064 /// XM_005264065 /// XM_005264066 /// XM_005264068 /// XM_005264069 /// XM_005264071 /// XM_006712864 /// XM_006712865 /// XM_006712866 /// XM_006712867 /// XM_006712868 /// XM_006712869 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // not recorded /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -195.80 </td> <td> 378.25 </td> <td> -8.07 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201433_s_at </td> <td> 201433_s_at </td> <td> NM_014754 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014754.1 /DEF=Homo sapiens phosphatidylserine synthase 1 (PTDSS1), mRNA. /FEA=mRNA /GEN=PTDSS1 /PROD=phosphatidylserine synthase 1 /DB_XREF=gi:7662646 /UG=Hs.77329 phosphatidylserine synthase 1 /FL=gb:BC004192.1 gb:BC004390.1 gb:D14694.1 gb:NM_014754.1 </td> <td> NM_014754 </td> <td> phosphatidylserine synthase 1 </td> <td> PTDSS1 </td> <td> 9791 </td> <td> NM_001290225 /// NM_014754 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006659 // phosphatidylserine biosynthetic process // inferred from electronic annotation /// 0006659 // phosphatidylserine biosynthetic process // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0016740 // transferase activity // inferred from electronic annotation </td> <td> 186.45 </td> <td> 402.05 </td> <td> 8.06 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 211071_s_at </td> <td> 211071_s_at </td> <td> BC006471 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006471.1 /DEF=Homo sapiens, ALL1-fused gene from chromosome 1q, clone MGC:4013, mRNA, complete cds.  /FEA=mRNA /PROD=ALL1-fused gene from chromosome 1q /DB_XREF=gi:13623686 /FL=gb:BC006471.1 </td> <td> BC006471 </td> <td> myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 </td> <td> MLLT11 </td> <td> 10962 </td> <td> NM_006818 </td> <td> 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0051901 // positive regulation of mitochondrial depolarization // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0097190 // apoptotic signaling pathway // inferred from electronic annotation /// 0097191 // extrinsic apoptotic signaling pathway // inferred from direct assay /// 0097193 // intrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from direct assay </td> <td>  </td> <td> 563.15 </td> <td> 1224.90 </td> <td> 8.06 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201849_at </td> <td> 201849_at </td> <td> NM_004052 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004052.2 /DEF=Homo sapiens BCL2adenovirus E1B 19kD-interacting protein 3 (BNIP3), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=BNIP3 /PROD=BCL2adenovirus E1B 19kD-interacting protein 3 /DB_XREF=gi:7669480 /UG=Hs.79428 BCL2adenovirus E1B 19kD-interacting protein 3 /FL=gb:AF002697.1 gb:U15174.1 gb:NM_004052.2 </td> <td> NM_004052 </td> <td> BCL2/adenovirus E1B 19kDa interacting protein 3 </td> <td> BNIP3 </td> <td> 664 </td> <td> NM_004052 </td> <td> 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0006309 // apoptotic DNA fragmentation // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006915 // apoptotic process // inferred from physical interaction /// 0008219 // cell death // inferred from sequence or structural similarity /// 0008626 // granzyme-mediated apoptotic signaling pathway // inferred from direct assay /// 0010508 // positive regulation of autophagy // traceable author statement /// 0010637 // negative regulation of mitochondrial fusion // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043068 // positive regulation of programmed cell death // inferred from direct assay /// 0043243 // positive regulation of protein complex disassembly // inferred from direct assay /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from direct assay /// 0045837 // negative regulation of membrane potential // inferred from direct assay /// 0046902 // regulation of mitochondrial membrane permeability // inferred from direct assay /// 0048102 // autophagic cell death // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from direct assay /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071279 // cellular response to cobalt ion // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from mutant phenotype /// 0072593 // reactive oxygen species metabolic process // inferred from direct assay /// 0090141 // positive regulation of mitochondrial fission // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0097193 // intrinsic apoptotic signaling pathway // inferred from electronic annotation /// 0097345 // mitochondrial outer membrane permeabilization // inferred from direct assay /// 1990144 // intrinsic apoptotic signaling pathway in response to hypoxia // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005635 // nuclear envelope // inferred from direct assay /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0031307 // integral component of mitochondrial outer membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from mutant phenotype </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0051020 // GTPase binding // inferred from physical interaction </td> <td> -541.30 </td> <td> 465.98 </td> <td> -8.04 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203140_at </td> <td> 203140_at </td> <td> NM_001706 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001706.1 /DEF=Homo sapiens B-cell CLLlymphoma 6 (zinc finger protein 51) (BCL6), mRNA.  /FEA=mRNA /GEN=BCL6 /PROD=B-cell CLLlymphoma 6 (zinc finger protein 51) /DB_XREF=gi:4502382 /UG=Hs.155024 B-cell CLLlymphoma 6 (zinc finger protein 51) /FL=gb:U00115.1 gb:NM_001706.1 </td> <td> NM_001706 </td> <td> B-cell CLL/lymphoma 6 </td> <td> BCL6 </td> <td> 604 </td> <td> NM_001130845 /// NM_001134738 /// NM_001706 /// NM_138931 /// XM_005247694 </td> <td> 0000060 // protein import into nucleus, translocation // inferred from genetic interaction /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001953 // negative regulation of cell-matrix adhesion // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002467 // germinal center formation // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // non-traceable author statement /// 0002829 // negative regulation of type 2 immune response // inferred from electronic annotation /// 0002903 // negative regulation of B cell apoptotic process // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032764 // negative regulation of mast cell cytokine production // inferred from electronic annotation /// 0035024 // negative regulation of Rho protein signal transduction // inferred from electronic annotation /// 0042092 // type 2 immune response // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043380 // regulation of memory T cell differentiation // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045629 // negative regulation of T-helper 2 cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement /// 0048294 // negative regulation of isotype switching to IgE isotypes // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050776 // regulation of immune response // non-traceable author statement /// 0051272 // positive regulation of cellular component movement // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005657 // replication fork // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -116.13 </td> <td> 126.81 </td> <td> -8.04 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 211564_s_at </td> <td> 211564_s_at </td> <td> BC003096 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003096.1 /DEF=Homo sapiens, Similar to LIM domain protein, clone MGC:1645, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to LIM domain protein /DB_XREF=gi:13111856 /UG=Hs.79691 LIM domain protein /FL=gb:BC003096.1 </td> <td> BC003096 </td> <td> PDZ and LIM domain 4 </td> <td> PDLIM4 </td> <td> 8572 </td> <td> NM_001131027 /// NM_003687 /// XM_006714723 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -168.75 </td> <td> 237.05 </td> <td> -8.03 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200644_at </td> <td> 200644_at </td> <td> NM_023009 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_023009.1 /DEF=Homo sapiens macrophage myristoylated alanine-rich C kinase substrate (MACMARCKS), mRNA.  /FEA=mRNA /GEN=MACMARCKS /PROD=macrophage myristoylated alanine-rich C kinasesubstrate /DB_XREF=gi:13491173 /UG=Hs.75061 macrophage myristoylated alanine-rich C kinase substrate /FL=gb:NM_023009.1 </td> <td> NM_023009 </td> <td> MARCKS-like 1 </td> <td> MARCKSL1 </td> <td> 65108 </td> <td> NM_023009 /// NR_052852 </td> <td> 0008284 // positive regulation of cell proliferation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation </td> <td> 297.40 </td> <td> 1024.00 </td> <td> 8.02 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 210563_x_at </td> <td> 210563_x_at </td> <td> U97075 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U97075.1 /DEF=Homo sapiens FLICE-like inhibitory protein short form mRNA, complete cds.  /FEA=mRNA /PROD=FLICE-like inhibitory protein short form /DB_XREF=gi:2253680 /UG=Hs.195175 CASP8 and FADD-like apoptosis regulator /FL=gb:U97075.1 </td> <td> U97075 </td> <td> CASP8 and FADD-like apoptosis regulator </td> <td> CFLAR </td> <td> 8837 </td> <td> NM_001127183 /// NM_001127184 /// NM_001202515 /// NM_001202516 /// NM_001202517 /// NM_001202518 /// NM_001202519 /// NM_003879 /// XM_005246935 /// XM_005246936 /// XM_005246937 /// XM_005246938 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from sequence or structural similarity /// 0014732 // skeletal muscle atrophy // inferred from sequence or structural similarity /// 0014842 // regulation of satellite cell proliferation // inferred from sequence or structural similarity /// 0014866 // skeletal myofibril assembly // inferred from sequence or structural similarity /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043403 // skeletal muscle tissue regeneration // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0060544 // regulation of necroptotic process // inferred from direct assay /// 0097190 // apoptotic signaling pathway // traceable author statement /// 1901740 // negative regulation of myoblast fusion // inferred from sequence or structural similarity /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0031264 // death-inducing signaling complex // inferred from direct assay /// 0031265 // CD95 death-inducing signaling complex // inferred from electronic annotation /// 0097342 // ripoptosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0004197 // cysteine-type endopeptidase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // inferred from direct assay /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0035877 // death effector domain binding // not recorded </td> <td> -261.27 </td> <td> 483.71 </td> <td> -8.01 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 216236_s_at </td> <td> 216236_s_at </td> <td> AL110298 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL110298.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564K1672 (from clone DKFZp564K1672); partial cds.  /FEA=mRNA /GEN=DKFZp564K1672 /PROD=hypothetical protein /DB_XREF=gi:5817258 /UG=Hs.7594 solute carrier family 2 (facilitated glucose transporter), member 3 </td> <td> AL110298 </td> <td> solute carrier family 2 (facilitated glucose transporter), member 14 /// solute carrier family 2 (facilitated glucose transporter), member 3 </td> <td> SLC2A14 /// SLC2A3 </td> <td> 6515 /// 144195 </td> <td> NM_001286233 /// NM_001286234 /// NM_001286235 /// NM_001286236 /// NM_001286237 /// NM_006931 /// NM_153449 /// XM_005253315 /// XM_005253317 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation </td> <td> -186.35 </td> <td> 140.72 </td> <td> -8.00 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218065_s_at </td> <td> 218065_s_at </td> <td> NM_020644 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020644.1 /DEF=Homo sapiens chromosome 11 open reading frame 15 (C11ORF15), mRNA. /FEA=mRNA /GEN=C11ORF15 /PROD=chromosome 11 open reading frame 15 /DB_XREF=gi:11034854 /UG=Hs.121619 chromosome 11 open reading frame 15 /FL=gb:NM_020644.1 </td> <td> NM_020644 </td> <td> TMEM9 domain family, member B </td> <td> TMEM9B </td> <td> 56674 </td> <td> NM_001286094 /// NM_001286095 /// NM_020644 </td> <td> 0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype </td> <td> 113.03 </td> <td> 242.16 </td> <td> 7.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204087_s_at </td> <td> 204087_s_at </td> <td> NM_021095 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021095.1 /DEF=Homo sapiens solute carrier family 5 (sodium-dependent vitamin transporter), member 6 (SLC5A6), mRNA.  /FEA=mRNA /GEN=SLC5A6 /PROD=solute carrier family 5 (sodium-dependentvitamin transporter), member 6 /DB_XREF=gi:10863878 /UG=Hs.321579 solute carrier family 5 (sodium-dependent vitamin transporter), member 6 /FL=gb:NM_021095.1 gb:AF069307.1 gb:AF081571.1 </td> <td> NM_021095 </td> <td> solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6 </td> <td> SLC5A6 </td> <td> 8884 </td> <td> NM_021095 /// NR_028323 /// XM_006712128 /// XM_006712129 /// XM_006712130 /// XM_006712131 </td> <td> 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006768 // biotin metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0015878 // biotin transport // inferred from electronic annotation /// 0015887 // pantothenate transmembrane transport // inferred from electronic annotation /// 0015939 // pantothenate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0008523 // sodium-dependent multivitamin transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation </td> <td> 68.00 </td> <td> 108.85 </td> <td> 7.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212905_at </td> <td> 212905_at </td> <td> AI872408 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI872408 /FEA=EST /DB_XREF=gi:5546457 /DB_XREF=est:wm58f02.x1 /CLONE=IMAGE:2440155 /UG=Hs.21992 likely ortholog of mouse variant polyadenylation protein CSTF-64; KIAA0689 protein </td> <td> AI872408 </td> <td> cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant </td> <td> CSTF2T </td> <td> 23283 </td> <td> NM_015235 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 63.65 </td> <td> 58.40 </td> <td> 7.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202727_s_at </td> <td> 202727_s_at </td> <td> NM_000416 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000416.1 /DEF=Homo sapiens interferon gamma receptor 1 (IFNGR1), mRNA. /FEA=mRNA /GEN=IFNGR1 /PROD=interferon gamma receptor 1 /DB_XREF=gi:4557879 /UG=Hs.180866 interferon gamma receptor 1 /FL=gb:BC005333.1 gb:J03143.1 gb:NM_000416.1 </td> <td> NM_000416 </td> <td> interferon gamma receptor 1 </td> <td> IFNGR1 </td> <td> 3459 </td> <td> NM_000416 /// XM_006715470 /// XM_006715471 </td> <td> 0007165 // signal transduction // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation </td> <td> 0004906 // interferon-gamma receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019955 // cytokine binding // inferred from electronic annotation </td> <td> -304.80 </td> <td> 295.57 </td> <td> -7.97 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204358_s_at </td> <td> 204358_s_at </td> <td> AF169676 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF169676.1 /DEF=Homo sapiens leucine-rich repeat transmembrane protein FLRT2 (FLRT2) mRNA, complete cds.  /FEA=mRNA /GEN=FLRT2 /PROD=leucine-rich repeat transmembrane protein FLRT2 /DB_XREF=gi:6808604 /UG=Hs.48998 fibronectin leucine rich transmembrane protein 2 /FL=gb:AB007865.1 gb:AF169676.1 gb:NM_013231.1 </td> <td> AF169676 </td> <td> fibronectin leucine rich transmembrane protein 2 /// uncharacterized LOC100506718 </td> <td> FLRT2 /// LOC100506718 </td> <td> 23768 /// 100506718 </td> <td> NM_013231 /// XM_005267489 /// XM_005267490 /// XM_006720095 /// XR_111450 /// XR_172052 /// XR_248023 /// XR_248024 /// XR_248025 /// XR_424524 /// XR_424525 /// XR_424526 /// XR_424527 /// XR_429303 /// XR_429304 /// XR_429305 /// XR_429306 /// XR_429307 /// XR_429308 /// XR_429309 /// XR_433009 /// XR_433010 /// XR_433011 /// XR_433012 /// XR_433013 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0035556 // intracellular signal transduction // non-traceable author statement </td> <td> 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005057 // receptor signaling protein activity // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // non-traceable author statement </td> <td> -166.70 </td> <td> 178.82 </td> <td> -7.97 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 207375_s_at </td> <td> 207375_s_at </td> <td> NM_002189 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002189.1 /DEF=Homo sapiens interleukin 15 receptor, alpha (IL15RA), mRNA. /FEA=mRNA /GEN=IL15RA /PROD=interleukin 15 receptor, alpha /DB_XREF=gi:4504648 /UG=Hs.12503 interleukin 15 receptor, alpha /FL=gb:U31628.1 gb:NM_002189.1 </td> <td> NM_002189 </td> <td> interleukin 15 receptor, alpha </td> <td> IL15RA </td> <td> 3601 </td> <td> NM_001243539 /// NM_001256765 /// NM_002189 /// NM_172200 /// NR_046362 /// XM_006717441 /// XM_006717442 /// XM_006717443 /// XM_006717444 /// XM_006717445 /// XM_006717446 /// XM_006717447 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032825 // positive regulation of natural killer cell differentiation // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // traceable author statement /// 0004896 // cytokine receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -82.62 </td> <td> 102.81 </td> <td> -7.97 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212367_at </td> <td> 212367_at </td> <td> AI799061 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI799061 /FEA=EST /DB_XREF=gi:5364533 /DB_XREF=est:we98a10.x1 /CLONE=IMAGE:2349114 /UG=Hs.6048 FEM-1 (C.elegans) homolog b /FL=gb:AF178632.1 gb:NM_015322.1 gb:AF204883.1 </td> <td> AI799061 </td> <td> fem-1 homolog b (C. elegans) </td> <td> FEM1B </td> <td> 10116 </td> <td> NM_015322 /// XM_006720370 </td> <td> 0002070 // epithelial cell maturation // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051438 // regulation of ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0060442 // branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0060743 // epithelial cell maturation involved in prostate gland development // inferred from electronic annotation /// 1902041 // regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 2000001 // regulation of DNA damage checkpoint // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0005123 // death receptor binding // inferred from mutant phenotype /// 0005123 // death receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 84.85 </td> <td> 65.70 </td> <td> 7.97 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212222_at </td> <td> 212222_at </td> <td> AU143855 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU143855 /FEA=EST /DB_XREF=gi:11005376 /DB_XREF=est:AU143855 /CLONE=HEMBA1000210 /UG=Hs.112396 KIAA0077 protein </td> <td> AU143855 </td> <td> proteasome (prosome, macropain) activator subunit 4 </td> <td> PSME4 </td> <td> 23198 </td> <td> NM_014614 /// XM_006711969 </td> <td> 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006281 // DNA repair // inferred from sequence or structural similarity /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from sequence or structural similarity /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010499 // proteasomal ubiquitin-independent protein catabolic process // inferred from sequence or structural similarity /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0035093 // spermatogenesis, exchange of chromosomal proteins // inferred from sequence or structural similarity /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 1990111 // spermatoproteasome complex // inferred from sequence or structural similarity </td> <td> 0005488 // binding // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from sequence or structural similarity /// 0070577 // lysine-acetylated histone binding // inferred from sequence or structural similarity </td> <td> 79.23 </td> <td> 84.76 </td> <td> 7.96 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 205018_s_at </td> <td> 205018_s_at </td> <td> NM_005757 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005757.2 /DEF=Homo sapiens C3H-type zinc finger protein; similar to D. melanogaster muscleblind B protein (MBLL), mRNA.  /FEA=mRNA /GEN=MBLL /PROD=C3H-type zinc finger protein /DB_XREF=gi:9665257 /UG=Hs.184340 C3H-type zinc finger protein; similar to D. melanogaster muscleblind B protein /FL=gb:AF061261.1 gb:NM_005757.2 </td> <td> NM_005757 </td> <td> muscleblind-like splicing regulator 2 </td> <td> MBNL2 </td> <td> 10150 </td> <td> NM_144778 /// NM_207304 /// XM_005254018 /// XM_005254019 /// XM_005254020 /// XM_005254021 /// XM_005254022 /// XM_006719912 </td> <td> 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -301.20 </td> <td> 266.12 </td> <td> -7.96 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201778_s_at </td> <td> 201778_s_at </td> <td> NM_014774 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014774.1 /DEF=Homo sapiens KIAA0494 gene product (KIAA0494), mRNA. /FEA=mRNA /GEN=KIAA0494 /PROD=KIAA0494 gene product /DB_XREF=gi:7662159 /UG=Hs.62515 KIAA0494 gene product /FL=gb:BC002525.1 gb:AB007963.1 gb:NM_014774.1 </td> <td> NM_014774 </td> <td> EF-hand calcium binding domain 14 </td> <td> EFCAB14 </td> <td> 9813 </td> <td> NM_014774 </td> <td>  </td> <td>  </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 146.65 </td> <td> 286.57 </td> <td> 7.95 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213895_at </td> <td> 213895_at </td> <td> BF445047 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF445047 /FEA=EST /DB_XREF=gi:11510185 /DB_XREF=est:nad20g10.x1 /CLONE=IMAGE:3366330 /UG=Hs.79368 epithelial membrane protein 1 </td> <td> BF445047 </td> <td> epithelial membrane protein 1 </td> <td> EMP1 </td> <td> 2012 </td> <td> NM_001423 </td> <td> 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0016049 // cell growth // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 85.30 </td> <td> 68.55 </td> <td> 7.95 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202365_at </td> <td> 202365_at </td> <td> BC004815 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004815.1 /DEF=Homo sapiens, clone MGC:5139, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:5139) /DB_XREF=gi:13435956 /UG=Hs.127610 acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain /FL=gb:BC004815.1 gb:M26393.1 gb:NM_000017.1 </td> <td> BC004815 </td> <td> unc-119 homolog B (C. elegans) </td> <td> UNC119B </td> <td> 84747 </td> <td> NM_001080533 /// NM_032661 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0042953 // lipoprotein transport // inferred from direct assay /// 0060271 // cilium morphogenesis // inferred from mutant phenotype </td> <td> 0005929 // cilium // inferred from electronic annotation /// 0035869 // ciliary transition zone // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from direct assay </td> <td> 94.55 </td> <td> 91.78 </td> <td> 7.94 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202710_at </td> <td> 202710_at </td> <td> BC000899 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000899.1 /DEF=Homo sapiens, Golgi vesicular membrane trafficking protein p18, clone MGC:5210, mRNA, complete cds.  /FEA=mRNA /PROD=Golgi vesicular membrane trafficking proteinp18 /DB_XREF=gi:12654162 /UG=Hs.23103 Bet1 (S. cerevisiae) homolog /FL=gb:BC000899.1 gb:NM_005868.2 gb:AF007551.1 </td> <td> BC000899 </td> <td> Bet1 golgi vesicular membrane trafficking protein </td> <td> BET1 </td> <td> 10282 </td> <td> NM_005868 /// XM_005250109 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0048280 // vesicle fusion with Golgi apparatus // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031985 // Golgi cisterna // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019905 // syntaxin binding // inferred from electronic annotation </td> <td> 127.12 </td> <td> 195.11 </td> <td> 7.94 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 219013_at </td> <td> 219013_at </td> <td> NM_022087 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022087.1 /DEF=Homo sapiens hypothetical protein FLJ21634 (FLJ21634), mRNA. /FEA=mRNA /GEN=FLJ21634 /PROD=hypothetical protein FLJ21634 /DB_XREF=gi:11545800 /UG=Hs.97056 hypothetical protein FLJ21634 /FL=gb:NM_022087.1 </td> <td> NM_022087 </td> <td> polypeptide N-acetylgalactosaminyltransferase 11 </td> <td> GALNT11 </td> <td> 63917 </td> <td> NM_022087 /// XM_006716082 /// XM_006716083 /// XM_006716084 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // inferred from sequence or structural similarity /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008593 // regulation of Notch signaling pathway // inferred from sequence or structural similarity /// 0016266 // O-glycan processing // traceable author statement /// 0018243 // protein O-linked glycosylation via threonine // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0061314 // Notch signaling involved in heart development // inferred from sequence or structural similarity </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0005112 // Notch binding // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 71.58 </td> <td> 67.71 </td> <td> 7.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204839_at </td> <td> 204839_at </td> <td> NM_015918 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015918.1 /DEF=Homo sapiens hypothetical protein (HSPC004), mRNA. /FEA=mRNA /GEN=HSPC004 /PROD=hypothetical protein /DB_XREF=gi:7705422 /UG=Hs.279913 hypothetical protein /FL=gb:AF070660.1 gb:AF117232.1 gb:NM_015918.1 </td> <td> NM_015918 </td> <td> processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae) </td> <td> POP5 </td> <td> 51367 </td> <td> NM_015918 /// NM_198201 /// NM_198202 </td> <td> 0008033 // tRNA processing // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0090501 // RNA phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005655 // nucleolar ribonuclease P complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation </td> <td> 0004526 // ribonuclease P activity // inferred from electronic annotation /// 0004540 // ribonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 71.45 </td> <td> 118.72 </td> <td> 7.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202697_at </td> <td> 202697_at </td> <td> NM_007006 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007006.1 /DEF=Homo sapiens cleavage and polyadenylation specific factor 5, 25 kD subunit (CPSF5), mRNA.  /FEA=mRNA /GEN=CPSF5 /PROD=cleavage and polyadenylation specific factor 5,25 kD subunit /DB_XREF=gi:5901925 /UG=Hs.9605 cleavage and polyadenylation specific factor 5, 25 kD subunit /FL=gb:BC001403.1 gb:NM_007006.1 </td> <td> NM_007006 </td> <td> nudix (nucleoside diphosphate linked moiety X)-type motif 21 </td> <td> NUDT21 </td> <td> 11051 </td> <td> NM_007006 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // inferred from mutant phenotype /// 0006397 // mRNA processing // inferred from direct assay /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051262 // protein tetramerization // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005849 // mRNA cleavage factor complex // inferred from direct assay /// 0042382 // paraspeckles // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from direct assay /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017091 // AU-rich element binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -70.58 </td> <td> 167.39 </td> <td> -7.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203274_at </td> <td> 203274_at </td> <td> NM_012151 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012151.2 /DEF=Homo sapiens coagulation factor VIII-associated (intronic transcript) (F8A), mRNA.  /FEA=mRNA /GEN=F8A /PROD=coagulation factor VIII-associated protein /DB_XREF=gi:12056462 /UG=Hs.83363 coagulation factor VIII-associated (intronic transcript) /FL=gb:NM_012151.2 </td> <td> NM_012151 </td> <td> coagulation factor VIII-associated 1 /// coagulation factor VIII-associated 2 /// coagulation factor VIII-associated 3 </td> <td> F8A1 /// F8A2 /// F8A3 </td> <td> 8263 /// 474383 /// 474384 </td> <td> NM_001007523 /// NM_001007524 /// NM_012151 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td>  </td> <td> 68.05 </td> <td> 76.40 </td> <td> 7.89 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 208313_s_at </td> <td> 208313_s_at </td> <td> NM_004630 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004630.1 /DEF=Homo sapiens zinc finger protein 162 (ZNF162), mRNA. /FEA=mRNA /GEN=ZNF162 /PROD=zinc finger protein 162 /DB_XREF=gi:4759339 /UG=Hs.180677 zinc finger protein 162 /FL=gb:NM_004630.1 gb:D26120.1 </td> <td> NM_004630 </td> <td> splicing factor 1 </td> <td> SF1 </td> <td> 7536 </td> <td> NM_001178030 /// NM_001178031 /// NM_004630 /// NM_201995 /// NM_201997 /// NM_201998 /// NR_033649 /// NR_033650 /// XM_006718681 /// XM_006718682 /// XM_006718683 /// XM_006718684 /// XM_006718685 </td> <td> 0000245 // spliceosomal complex assembly // non-traceable author statement /// 0000389 // mRNA 3'-splice site recognition // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0022402 // cell cycle process // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0033327 // Leydig cell differentiation // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050810 // regulation of steroid biosynthetic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005840 // ribosome // non-traceable author statement </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // non-traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 153.12 </td> <td> 435.19 </td> <td> 7.88 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 221483_s_at </td> <td> 221483_s_at </td> <td> AF084555 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF084555.1 /DEF=Homo sapiens okadaic acid-inducible and cAMP-regulated phosphoprotein 19 (ARPP-19) mRNA, complete cds.  /FEA=mRNA /GEN=ARPP-19 /PROD=okadaic acid-inducible and cAMP-regulatedphosphoprotein 19 /DB_XREF=gi:5813858 /UG=Hs.7351 cyclic AMP phosphoprotein, 19 kD /FL=gb:BC003418.1 gb:AF084555.1 </td> <td> AF084555 </td> <td> cAMP-regulated phosphoprotein, 19kDa </td> <td> ARPP19 </td> <td> 10776 </td> <td> NM_006628 /// XM_005254132 /// XM_005254133 /// XM_005254134 /// XM_005254135 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from mutant phenotype /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0045722 // positive regulation of gluconeogenesis // inferred from direct assay /// 0046326 // positive regulation of glucose import // non-traceable author statement /// 0050790 // regulation of catalytic activity // inferred from sequence or structural similarity /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // inferred from sequence or structural similarity /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0019212 // phosphatase inhibitor activity // inferred from sequence or structural similarity /// 0051721 // protein phosphatase 2A binding // inferred from sequence or structural similarity </td> <td> 401.80 </td> <td> 600.38 </td> <td> 7.87 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204657_s_at </td> <td> 204657_s_at </td> <td> NM_003028 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003028.1 /DEF=Homo sapiens SHB adaptor protein (a Src homology 2 protein) (SHB), mRNA.  /FEA=mRNA /GEN=SHB /PROD=SHB adaptor protein (a Src homology 2 protein) /DB_XREF=gi:4506934 /UG=Hs.244542 SHB adaptor protein (a Src homology 2 protein) /FL=gb:NM_003028.1 </td> <td> NM_003028 </td> <td> Src homology 2 domain containing adaptor protein B </td> <td> SHB </td> <td> 6461 </td> <td> NM_003028 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // traceable author statement /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 1900194 // negative regulation of oocyte maturation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0001948 // glycoprotein binding // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -82.97 </td> <td> 96.09 </td> <td> -7.86 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 211527_x_at </td> <td> 211527_x_at </td> <td> M27281 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M27281.1 /DEF=Human vascular permeability factor mRNA, complete cds. /FEA=mRNA /DB_XREF=gi:340300 /UG=Hs.73793 vascular endothelial growth factor /FL=gb:M27281.1 </td> <td> M27281 </td> <td> vascular endothelial growth factor A </td> <td> VEGFA </td> <td> 7422 </td> <td> NM_001025366 /// NM_001025367 /// NM_001025368 /// NM_001025369 /// NM_001025370 /// NM_001033756 /// NM_001171622 /// NM_001171623 /// NM_001171624 /// NM_001171625 /// NM_001171626 /// NM_001171627 /// NM_001171628 /// NM_001171629 /// NM_001171630 /// NM_001204384 /// NM_001204385 /// NM_001287044 /// NM_003376 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001525 // angiogenesis // inferred from direct assay /// 0001541 // ovarian follicle development // inferred from sequence or structural similarity /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // traceable author statement /// 0001666 // response to hypoxia // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from sequence or structural similarity /// 0001944 // vasculature development // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0002052 // positive regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0002575 // basophil chemotaxis // inferred from direct assay /// 0002576 // platelet degranulation // traceable author statement /// 0002687 // positive regulation of leukocyte migration // traceable author statement /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003169 // coronary vein morphogenesis // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007498 // mesoderm development // inferred from sequence or structural similarity /// 0007595 // lactation // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008360 // regulation of cell shape // inferred from direct assay /// 0009409 // response to cold // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030212 // hyaluronan metabolic process // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from direct assay /// 0030225 // macrophage differentiation // inferred from direct assay /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030855 // epithelial cell differentiation // inferred from sequence or structural similarity /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0031077 // post-embryonic camera-type eye development // inferred from sequence or structural similarity /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032147 // activation of protein kinase activity // inferred from direct assay /// 0032793 // positive regulation of CREB transcription factor activity // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0035148 // tube formation // inferred from direct assay /// 0035767 // endothelial cell chemotaxis // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0036303 // lymph vessel morphogenesis // inferred from sequence or structural similarity /// 0038033 // positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from direct assay /// 0038091 // positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway // inferred from direct assay /// 0038190 // VEGF-activated neuropilin signaling pathway // inferred from sequence or structural similarity /// 0040007 // growth // inferred from sequence or structural similarity /// 0042088 // T-helper 1 type immune response // inferred from electronic annotation /// 0042462 // eye photoreceptor cell development // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043069 // negative regulation of programmed cell death // inferred from electronic annotation /// 0043117 // positive regulation of vascular permeability // inferred from direct assay /// 0043129 // surfactant homeostasis // inferred from sequence or structural similarity /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045779 // negative regulation of bone resorption // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048469 // cell maturation // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048739 // cardiac muscle fiber development // inferred from sequence or structural similarity /// 0048754 // branching morphogenesis of an epithelial tube // inferred from sequence or structural similarity /// 0048842 // positive regulation of axon extension involved in axon guidance // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050918 // positive chemotaxis // inferred from direct assay /// 0050927 // positive regulation of positive chemotaxis // inferred from direct assay /// 0050930 // induction of positive chemotaxis // inferred from direct assay /// 0050930 // induction of positive chemotaxis // non-traceable author statement /// 0051272 // positive regulation of cellular component movement // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0060319 // primitive erythrocyte differentiation // inferred from sequence or structural similarity /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from sequence or structural similarity /// 0060754 // positive regulation of mast cell chemotaxis // inferred from direct assay /// 0060948 // cardiac vascular smooth muscle cell development // inferred from sequence or structural similarity /// 0060982 // coronary artery morphogenesis // inferred from sequence or structural similarity /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0061419 // positive regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071456 // cellular response to hypoxia // traceable author statement /// 0071542 // dopaminergic neuron differentiation // inferred from sequence or structural similarity /// 0071679 // commissural neuron axon guidance // inferred from sequence or structural similarity /// 0090037 // positive regulation of protein kinase C signaling // inferred from direct assay /// 0090050 // positive regulation of cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0090259 // regulation of retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 1900086 // positive regulation of peptidyl-tyrosine autophosphorylation // inferred from direct assay /// 1900745 // positive regulation of p38MAPK cascade // inferred from direct assay /// 1901492 // positive regulation of lymphangiogenesis // inferred from electronic annotation /// 1901727 // positive regulation of histone deacetylase activity // inferred from direct assay /// 1902336 // positive regulation of retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 1902533 // positive regulation of intracellular signal transduction // inferred from direct assay /// 1902966 // positive regulation of protein localization to early endosome // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation </td> <td> 0001968 // fibronectin binding // inferred from direct assay /// 0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005172 // vascular endothelial growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from sequence or structural similarity /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from mutant phenotype /// 0038191 // neuropilin binding // inferred from physical interaction /// 0042056 // chemoattractant activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0043183 // vascular endothelial growth factor receptor 1 binding // inferred from physical interaction /// 0043184 // vascular endothelial growth factor receptor 2 binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0048018 // receptor agonist activity // inferred from physical interaction /// 0050840 // extracellular matrix binding // inferred by curator </td> <td> -108.55 </td> <td> 64.42 </td> <td> -7.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 64488_at </td> <td> 64488_at </td> <td> AW003091 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AW003091:wr03d04.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2480455 /clone_end=3' /gb=AW003091 /gi=5849929 /ug=Hs.6217 /len=613 </td> <td> AW003091 </td> <td> immunity-related GTPase family, Q </td> <td> IRGQ </td> <td> 126298 </td> <td> NM_001007561 /// XM_005258515 /// XM_005258516 </td> <td>  </td> <td>  </td> <td>  </td> <td> 60.12 </td> <td> 35.41 </td> <td> 7.84 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218684_at </td> <td> 218684_at </td> <td> NM_018103 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018103.1 /DEF=Homo sapiens hypothetical protein FLJ10470 (FLJ10470), mRNA. /FEA=mRNA /GEN=FLJ10470 /PROD=hypothetical protein FLJ10470 /DB_XREF=gi:8922441 /UG=Hs.44672 hypothetical protein FLJ10470 /FL=gb:NM_018103.1 </td> <td> NM_018103 </td> <td> leucine rich repeat containing 8 family, member D </td> <td> LRRC8D </td> <td> 55144 </td> <td> NM_001134479 /// NM_018103 /// XM_005270991 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 98.55 </td> <td> 174.90 </td> <td> 7.84 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212859_x_at </td> <td> 212859_x_at </td> <td> BF217861 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF217861 /FEA=EST /DB_XREF=gi:11111447 /DB_XREF=est:601885414F1 /CLONE=IMAGE:4103955 /UG=Hs.74170 metallothionein 1E (functional) </td> <td> BF217861 </td> <td> metallothionein 1E </td> <td> MT1E </td> <td> 4493 </td> <td> NM_175617 /// XM_005255956 </td> <td> 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0071276 // cellular response to cadmium ion // inferred from expression pattern /// 0071294 // cellular response to zinc ion // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0005507 // copper ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046870 // cadmium ion binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -1177.60 </td> <td> 2455.90 </td> <td> -7.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203044_at </td> <td> 203044_at </td> <td> NM_014918 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014918.1 /DEF=Homo sapiens KIAA0990 protein (KIAA0990), mRNA. /FEA=mRNA /GEN=KIAA0990 /PROD=KIAA0990 protein /DB_XREF=gi:7662433 /UG=Hs.110488 KIAA0990 protein /FL=gb:AB023207.1 gb:NM_014918.1 </td> <td> NM_014918 </td> <td> chondroitin sulfate synthase 1 </td> <td> CHSY1 </td> <td> 22856 </td> <td> NM_014918 /// XM_006720435 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // inferred from direct assay /// 0030206 // chondroitin sulfate biosynthetic process // traceable author statement /// 0030279 // negative regulation of ossification // inferred from mutant phenotype /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation </td> <td> 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047238 // glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0050510 // N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity // inferred from electronic annotation </td> <td> -112.12 </td> <td> 279.66 </td> <td> -7.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201473_at </td> <td> 201473_at </td> <td> NM_002229 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002229.1 /DEF=Homo sapiens jun B proto-oncogene (JUNB), mRNA. /FEA=mRNA /GEN=JUNB /PROD=jun B proto-oncogene /DB_XREF=gi:4504808 /UG=Hs.198951 jun B proto-oncogene /FL=gb:BC004250.1 gb:NM_002229.1 </td> <td> NM_002229 </td> <td> jun B proto-oncogene </td> <td> JUNB </td> <td> 3726 </td> <td> NM_002229 </td> <td> 0001570 // vasculogenesis // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001829 // trophectodermal cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007565 // female pregnancy // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0033687 // osteoblast proliferation // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0046697 // decidualization // inferred from electronic annotation /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0060136 // embryonic process involved in female pregnancy // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from electronic annotation </td> <td> 0000785 // chromatin // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -109.20 </td> <td> 103.62 </td> <td> -7.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212973_at </td> <td> 212973_at </td> <td> AI692341 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI692341 /FEA=EST /DB_XREF=gi:4969681 /DB_XREF=est:wd85g04.x1 /CLONE=IMAGE:2338422 /UG=Hs.79886 ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) </td> <td> AI692341 </td> <td> ribose 5-phosphate isomerase A </td> <td> RPIA </td> <td> 22934 </td> <td> NM_144563 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006098 // pentose-phosphate shunt // traceable author statement /// 0009052 // pentose-phosphate shunt, non-oxidative branch // inferred from electronic annotation /// 0019693 // ribose phosphate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005622 // intracellular // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004751 // ribose-5-phosphate isomerase activity // non-traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0048029 // monosaccharide binding // inferred from electronic annotation </td> <td> 84.70 </td> <td> 183.05 </td> <td> 7.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201018_at </td> <td> 201018_at </td> <td> AL079283 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL079283.1 /DEF=Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 39515. /FEA=mRNA /DB_XREF=gi:5102744 /UG=Hs.4310 eukaryotic translation initiation factor 1A /FL=gb:BC000793.1 gb:L18960.1 gb:NM_001412.1 </td> <td> AL079283 </td> <td> eukaryotic translation initiation factor 1A, X-linked </td> <td> EIF1AX </td> <td> 1964 </td> <td> NM_001412 </td> <td> 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 147.85 </td> <td> 155.97 </td> <td> 7.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200617_at </td> <td> 200617_at </td> <td> NM_014730 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014730.1 /DEF=Homo sapiens KIAA0152 gene product (KIAA0152), mRNA. /FEA=mRNA /GEN=KIAA0152 /PROD=KIAA0152 gene product /DB_XREF=gi:7661947 /UG=Hs.181418 KIAA0152 gene product /FL=gb:BC000371.1 gb:D63486.1 gb:NM_014730.1 </td> <td> NM_014730 </td> <td> malectin </td> <td> MLEC </td> <td> 9761 </td> <td> NM_014730 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0019899 // enzyme binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from sequence or structural similarity </td> <td> 139.00 </td> <td> 210.72 </td> <td> 7.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202258_s_at </td> <td> 202258_s_at </td> <td> U50532 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U50532.1 /DEF=Human BRCA2 region, mRNA sequence CG005. /FEA=mRNA /PROD=unknown /DB_XREF=gi:1531603 /UG=Hs.23518 hypothetical protein from BCRA2 region /FL=gb:NM_014887.1 </td> <td> U50532 </td> <td> NEDD4 binding protein 2-like 2 </td> <td> N4BP2L2 </td> <td> 10443 </td> <td> NM_001278432 /// NM_014887 /// NM_033111 /// XM_005266218 /// XM_005266219 /// XM_005266220 /// XM_005266221 /// XM_005266222 /// XM_005266223 /// XM_005266224 /// XM_005266228 /// XM_006719754 /// XR_429211 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 1902035 // positive regulation of hematopoietic stem cell proliferation // inferred from mutant phenotype /// 1902037 // negative regulation of hematopoietic stem cell differentiation // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001106 // RNA polymerase II transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> 91.97 </td> <td> 82.31 </td> <td> 7.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 217980_s_at </td> <td> 217980_s_at </td> <td> NM_017840 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017840.1 /DEF=Homo sapiens hypothetical protein FLJ20484 (FLJ20484), mRNA. /FEA=mRNA /GEN=FLJ20484 /PROD=hypothetical protein FLJ20484 /DB_XREF=gi:8923447 /UG=Hs.5080 hypothetical protein FLJ20484 /FL=gb:AF275806.1 gb:BC001040.1 gb:NM_017840.1 gb:AF183428.1 </td> <td> NM_017840 </td> <td> mitochondrial ribosomal protein L16 </td> <td> MRPL16 </td> <td> 54948 </td> <td> NM_017840 </td> <td> 0006412 // translation // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation </td> <td> 115.65 </td> <td> 199.00 </td> <td> 7.81 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204135_at </td> <td> 204135_at </td> <td> NM_014890 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014890.1 /DEF=Homo sapiens downregulated in ovarian cancer 1 (DOC1), mRNA. /FEA=mRNA /GEN=DOC1 /PROD=downregulated in ovarian cancer 1 /DB_XREF=gi:7657036 /UG=Hs.15432 downregulated in ovarian cancer 1 /FL=gb:U53445.1 gb:NM_014890.1 </td> <td> NM_014890 </td> <td> filamin A interacting protein 1-like </td> <td> FILIP1L </td> <td> 11259 </td> <td> NM_001042459 /// NM_001282793 /// NM_001282794 /// NM_014890 /// NM_182909 /// XM_006713486 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016459 // myosin complex // non-traceable author statement </td> <td>  </td> <td> -76.65 </td> <td> 218.05 </td> <td> -7.81 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200708_at </td> <td> 200708_at </td> <td> NM_002080 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002080.1 /DEF=Homo sapiens glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) (GOT2), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=GOT2 /PROD=aspartate aminotransferase 2 precursor /DB_XREF=gi:4504068 /UG=Hs.170197 glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) /FL=gb:BC000525.1 gb:M22632.1 gb:NM_002080.1 </td> <td> NM_002080 </td> <td> glutamic-oxaloacetic transaminase 2, mitochondrial </td> <td> GOT2 </td> <td> 2806 </td> <td> NM_001286220 /// NM_002080 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006103 // 2-oxoglutarate metabolic process // inferred from sequence or structural similarity /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006531 // aspartate metabolic process // inferred from sequence or structural similarity /// 0006532 // aspartate biosynthetic process // inferred from electronic annotation /// 0006533 // aspartate catabolic process // inferred from direct assay /// 0006536 // glutamate metabolic process // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0015908 // fatty acid transport // inferred from expression pattern /// 0019470 // 4-hydroxyproline catabolic process // traceable author statement /// 0019550 // glutamate catabolic process to aspartate // inferred from electronic annotation /// 0019551 // glutamate catabolic process to 2-oxoglutarate // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from direct assay /// 0097052 // L-kynurenine metabolic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // not recorded /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from direct assay /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from sequence or structural similarity /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016212 // kynurenine-oxoglutarate transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0080130 // L-phenylalanine:2-oxoglutarate aminotransferase activity // inferred from electronic annotation </td> <td> 297.45 </td> <td> 665.65 </td> <td> 7.81 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 205474_at </td> <td> 205474_at </td> <td> NM_015986 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015986.1 /DEF=Homo sapiens cytokine receptor-like molecule 9 (CREME9), mRNA. /FEA=mRNA /GEN=CREME9 /PROD=cytokine receptor-like molecule 9 /DB_XREF=gi:7705331 /UG=Hs.7120 cytokine receptor-like molecule 9 /FL=gb:AF046059.1 gb:AF120151.1 gb:NM_015986.1 </td> <td> NM_015986 </td> <td> cytokine receptor-like factor 3 </td> <td> CRLF3 </td> <td> 51379 </td> <td> NM_015986 /// NR_073118 /// XM_006721941 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046427 // positive regulation of JAK-STAT cascade // inferred from direct assay /// 0071158 // positive regulation of cell cycle arrest // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay </td> <td>  </td> <td> 67.97 </td> <td> 174.01 </td> <td> 7.80 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204906_at </td> <td> 204906_at </td> <td> BC002363 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002363.1 /DEF=Homo sapiens, ribosomal protein S6 kinase, 90kD, polypeptide 2, clone MGC:8629, mRNA, complete cds.  /FEA=mRNA /PROD=ribosomal protein S6 kinase, 90kD, polypeptide2 /DB_XREF=gi:12803118 /UG=Hs.301664 ribosomal protein S6 kinase, 90kD, polypeptide 2 /FL=gb:NM_021135.1 gb:BC002363.1 </td> <td> BC002363 </td> <td> ribosomal protein S6 kinase, 90kDa, polypeptide 2 </td> <td> RPS6KA2 </td> <td> 6196 </td> <td> NM_001006932 /// NM_021135 /// XM_005267092 /// XM_006715549 </td> <td> 0001556 // oocyte maturation // inferred from electronic annotation /// 0002035 // brain renin-angiotensin system // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045835 // negative regulation of meiosis // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060047 // heart contraction // inferred from electronic annotation /// 0070613 // regulation of protein processing // inferred from electronic annotation /// 0071322 // cellular response to carbohydrate stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004711 // ribosomal protein S6 kinase activity // inferred from electronic annotation /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -154.37 </td> <td> 292.94 </td> <td> -7.79 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 208845_at </td> <td> 208845_at </td> <td> BC002456 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002456.1 /DEF=Homo sapiens, voltage-dependent anion channel 3, clone MGC:1966, mRNA, complete cds.  /FEA=mRNA /PROD=voltage-dependent anion channel 3 /DB_XREF=gi:12803280 /UG=Hs.7381 voltage-dependent anion channel 3 /FL=gb:BC002456.1 gb:U90943.1 gb:AF038962.1 gb:NM_005662.1 </td> <td> BC002456 </td> <td> voltage-dependent anion channel 3 </td> <td> VDAC3 </td> <td> 7419 </td> <td> NM_001135694 /// NM_005662 /// XM_006716394 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0015853 // adenine transport // traceable author statement /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0046930 // pore complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0008308 // voltage-gated anion channel activity // traceable author statement /// 0015288 // porin activity // inferred from electronic annotation </td> <td> 200.60 </td> <td> 743.23 </td> <td> 7.79 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204286_s_at </td> <td> 204286_s_at </td> <td> NM_021127 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021127.1 /DEF=Homo sapiens phorbol-12-myristate-13-acetate-induced protein 1 (PMAIP1), mRNA.  /FEA=mRNA /GEN=PMAIP1 /PROD=phorbol-12-myristate-13-acetate-induced protein1 /DB_XREF=gi:10863922 /UG=Hs.96 phorbol-12-myristate-13-acetate-induced protein 1 /FL=gb:NM_021127.1 </td> <td> NM_021127 </td> <td> phorbol-12-myristate-13-acetate-induced protein 1 </td> <td> PMAIP1 </td> <td> 5366 </td> <td> NM_021127 </td> <td> 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010498 // proteasomal protein catabolic process // inferred from direct assay /// 0010907 // positive regulation of glucose metabolic process // inferred from direct assay /// 0010917 // negative regulation of mitochondrial membrane potential // inferred from sequence or structural similarity /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0042149 // cellular response to glucose starvation // inferred from mutant phenotype /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043331 // response to dsRNA // inferred from direct assay /// 0043517 // positive regulation of DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from direct assay /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from mutant phenotype /// 0072593 // reactive oxygen species metabolic process // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0097193 // intrinsic apoptotic signaling pathway // inferred from direct assay /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement /// 1902043 // positive regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from direct assay /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -228.10 </td> <td> 146.40 </td> <td> -7.78 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201862_s_at </td> <td> 201862_s_at </td> <td> NM_004735 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004735.1 /DEF=Homo sapiens leucine rich repeat (in FLII) interacting protein 1 (LRRFIP1), mRNA.  /FEA=mRNA /GEN=LRRFIP1 /PROD=leucine rich repeat (in FLII) interactingprotein 1 /DB_XREF=gi:4758689 /UG=Hs.326159 leucine rich repeat (in FLII) interacting protein 1 /FL=gb:NM_004735.1 </td> <td> NM_004735 </td> <td> leucine rich repeat (in FLII) interacting protein 1 </td> <td> LRRFIP1 </td> <td> 9208 </td> <td> NM_001137550 /// NM_001137551 /// NM_001137552 /// NM_001137553 /// NM_004735 /// XM_005246112 /// XM_005246113 /// XM_005246114 /// XM_005246115 /// XM_005246116 /// XM_005246117 /// XM_005246118 /// XM_005246119 /// XM_005246120 /// XM_005246121 /// XM_005246122 /// XM_005246123 /// XM_005246124 /// XM_005246125 /// XM_005246126 /// XM_005246127 /// XM_005246128 /// XM_005246129 /// XM_005246130 /// XM_005246131 /// XM_005246132 /// XM_005246133 /// XM_005246134 /// XM_005246135 /// XM_005246136 /// XM_005246137 /// XM_005246138 /// XM_005246139 /// XM_005246140 /// XM_005246141 /// XM_005246142 /// XM_006712840 /// XM_006712841 /// XM_006712842 /// XM_006712843 /// XM_006712844 /// XM_006712845 /// XM_006712846 /// XM_006712847 /// XM_006712848 /// XM_006712849 /// XM_006712850 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> -76.90 </td> <td> 225.22 </td> <td> -7.78 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212902_at </td> <td> 212902_at </td> <td> BE645231 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE645231 /FEA=EST /DB_XREF=gi:9969542 /DB_XREF=est:7e66g08.x1 /CLONE=IMAGE:3287486 /UG=Hs.211612 SEC24 (S. cerevisiae) related gene family, member A </td> <td> BE645231 </td> <td> SEC24 family member A </td> <td> SEC24A </td> <td> 10802 </td> <td> NM_001252231 /// NM_021982 /// XM_005271854 /// XM_006714523 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0008270 // zinc ion binding // inferred from electronic annotation </td> <td> -104.90 </td> <td> 126.80 </td> <td> -7.77 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218133_s_at </td> <td> 218133_s_at </td> <td> NM_021824 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021824.1 /DEF=Homo sapiens NIF3 (Ngg1 interacting factor 3, S.pombe homolog)-like 1 (NIF3L1), mRNA.  /FEA=mRNA /GEN=NIF3L1 /PROD=NIF3 (Ngg1 interacting factor 3, S.pombehomolog)-like 1 /DB_XREF=gi:11141898 /UG=Hs.21943 NIF3 (Ngg1 interacting factor 3, S.pombe homolog)-like 1 /FL=gb:AF182416.1 gb:NM_021824.1 gb:AF060513.1 gb:AB038949.1 </td> <td> NM_021824 </td> <td> NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) </td> <td> NIF3L1 </td> <td> 60491 </td> <td> NM_001136039 /// NM_001142355 /// NM_001142356 /// NM_021824 /// XM_005246742 /// XM_006712676 </td> <td> 0035998 // 7,8-dihydroneopterin 3'-triphosphate biosynthetic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003934 // GTP cyclohydrolase I activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 77.23 </td> <td> 62.16 </td> <td> 7.77 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 222216_s_at </td> <td> 222216_s_at </td> <td> AK026857 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026857.1 /DEF=Homo sapiens cDNA: FLJ23204 fis, clone ADSE00191. /FEA=mRNA /DB_XREF=gi:10439813 /UG=Hs.10026 ribosomal protein L17 isolog </td> <td> AK026857 </td> <td> mitochondrial ribosomal protein L17 </td> <td> MRPL17 </td> <td> 63875 </td> <td> NM_022061 </td> <td> 0006412 // translation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction </td> <td> 83.73 </td> <td> 169.69 </td> <td> 7.76 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 208766_s_at </td> <td> 208766_s_at </td> <td> BC001449 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001449.1 /DEF=Homo sapiens, heterogeneous nuclear ribonucleoprotein R, clone MGC:2039, mRNA, complete cds.  /FEA=mRNA /PROD=heterogeneous nuclear ribonucleoprotein R /DB_XREF=gi:12655184 /UG=Hs.15265 heterogeneous nuclear ribonucleoprotein R /FL=gb:BC001449.1 gb:AF000364.1 gb:NM_005826.1 </td> <td> BC001449 </td> <td> heterogeneous nuclear ribonucleoprotein R </td> <td> HNRNPR </td> <td> 10236 </td> <td> NM_001102397 /// NM_001102398 /// NM_001102399 /// NM_005826 /// XM_005245711 /// XM_005245712 /// XM_005245713 /// XM_005245714 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // non-traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 282.97 </td> <td> 670.14 </td> <td> 7.75 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213203_at </td> <td> 213203_at </td> <td> AI633709 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI633709 /FEA=EST /DB_XREF=gi:4685039 /DB_XREF=est:th71f03.x1 /CLONE=IMAGE:2124125 /UG=Hs.30174 small nuclear RNA activating complex, polypeptide 5, 19kD </td> <td> AI633709 </td> <td> small nuclear RNA activating complex, polypeptide 5, 19kDa </td> <td> SNAPC5 </td> <td> 10302 </td> <td> NM_006049 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006384 // transcription initiation from RNA polymerase III promoter // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation </td> <td> 70.90 </td> <td> 92.25 </td> <td> 7.75 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212265_at </td> <td> 212265_at </td> <td> AL031781 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL031781 /DEF=Human DNA sequence from clone 51J12 on chromosome 6q26-27. Contains the 3 part of the alternatively spliced gene for the human orthologs of mouse QKI-7 and QKI-7B (KH Domain RNA Binding proteins) and zebrafish ZKQ-1 (Quaking protein homolog). Con... /FEA=mRNA_1 /DB_XREF=gi:4038570 /UG=Hs.15020 homolog of mouse quaking QKI (KH domain RNA binding protein) /FL=gb:AF142419.1 gb:AF142422.1 </td> <td> AL031781 </td> <td> QKI, KH domain containing, RNA binding </td> <td> QKI </td> <td> 9444 </td> <td> NM_006775 /// NM_206853 /// NM_206854 /// NM_206855 /// XM_005267224 /// XR_245557 /// XR_427977 /// XR_427978 </td> <td> 0001570 // vasculogenesis // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation /// 0008366 // axon ensheathment // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0042759 // long-chain fatty acid biosynthetic process // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -149.32 </td> <td> 705.14 </td> <td> -7.75 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 205006_s_at </td> <td> 205006_s_at </td> <td> NM_004808 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004808.1 /DEF=Homo sapiens N-myristoyltransferase 2 (NMT2), mRNA. /FEA=mRNA /GEN=NMT2 /PROD=glycylpeptide N-tetradecanoyltransferase 2 /DB_XREF=gi:4758815 /UG=Hs.122647 N-myristoyltransferase 2 /FL=gb:AF043325.1 gb:NM_004808.1 </td> <td> NM_004808 </td> <td> N-myristoyltransferase 2 </td> <td> NMT2 </td> <td> 9397 </td> <td> NM_004808 /// XM_005252642 /// XM_005252643 /// XM_006717539 </td> <td> 0006499 // N-terminal protein myristoylation // inferred from electronic annotation /// 0007603 // phototransduction, visible light // traceable author statement /// 0009249 // protein lipoylation // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019082 // viral protein processing // traceable author statement /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0003824 // catalytic activity // traceable author statement /// 0004379 // glycylpeptide N-tetradecanoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation </td> <td> 105.17 </td> <td> 152.31 </td> <td> 7.74 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 210638_s_at </td> <td> 210638_s_at </td> <td> AF176704 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF176704.1 /DEF=Homo sapiens F-box protein FBX9 mRNA, complete cds. /FEA=mRNA /PROD=F-box protein FBX9 /DB_XREF=gi:6103646 /UG=Hs.11050 F-box only protein 9 /FL=gb:AF176704.1 </td> <td> AF176704 </td> <td> F-box protein 9 </td> <td> FBXO9 </td> <td> 26268 </td> <td> NM_012347 /// NM_033480 /// NM_033481 /// XM_005248995 /// XM_005248996 /// XM_006715050 /// XM_006715051 </td> <td> 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016567 // protein ubiquitination // non-traceable author statement /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0032006 // regulation of TOR signaling // inferred from mutant phenotype </td> <td> 0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 118.23 </td> <td> 223.51 </td> <td> 7.74 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 211518_s_at </td> <td> 211518_s_at </td> <td> D30751 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D30751.1 /DEF=Human placenta mRNA for bone morphogenetic protein 4 (BMP-4), complete cds.  /FEA=mRNA /GEN=BMP-4 /PROD=bone morphogenetic protein 4 /DB_XREF=gi:576934 /UG=Hs.68879 bone morphogenetic protein 4 /FL=gb:D30751.1 </td> <td> D30751 </td> <td> bone morphogenetic protein 4 </td> <td> BMP4 </td> <td> 652 </td> <td> NM_001202 /// NM_130850 /// NM_130851 /// XM_005268015 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000186 // activation of MAPKK activity // inferred from direct assay /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001656 // metanephros development // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from direct assay /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from direct assay /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001759 // organ induction // inferred from electronic annotation /// 0001822 // kidney development // inferred from mutant phenotype /// 0001823 // mesonephros development // inferred from expression pattern /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0001944 // vasculature development // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from sequence or structural similarity /// 0002043 // blood vessel endothelial cell proliferation involved in sprouting angiogenesis // inferred from direct assay /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0002244 // hematopoietic progenitor cell differentiation // inferred from direct assay /// 0002320 // lymphoid progenitor cell differentiation // inferred from mutant phenotype /// 0003014 // renal system process // inferred from electronic annotation /// 0003130 // BMP signaling pathway involved in heart induction // inferred from mutant phenotype /// 0003139 // secondary heart field specification // inferred from mutant phenotype /// 0003197 // endocardial cushion development // traceable author statement /// 0003279 // cardiac septum development // traceable author statement /// 0003323 // type B pancreatic cell development // inferred from direct assay /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from direct assay /// 0007182 // common-partner SMAD protein phosphorylation // inferred from direct assay /// 0007224 // smoothened signaling pathway // inferred from expression pattern /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007500 // mesodermal cell fate determination // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009791 // post-embryonic development // inferred from direct assay /// 0009888 // tissue development // inferred from electronic annotation /// 0009948 // anterior/posterior axis specification // inferred from electronic annotation /// 0010159 // specification of organ position // inferred from electronic annotation /// 0010453 // regulation of cell fate commitment // inferred from direct assay /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0010942 // positive regulation of cell death // inferred from direct assay /// 0021537 // telencephalon development // inferred from direct assay /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021978 // telencephalon regionalization // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from direct assay /// 0030225 // macrophage differentiation // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from mutant phenotype /// 0030513 // positive regulation of BMP signaling pathway // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0032331 // negative regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from direct assay /// 0033085 // negative regulation of T cell differentiation in thymus // inferred from mutant phenotype /// 0033088 // negative regulation of immature T cell proliferation in thymus // inferred from mutant phenotype /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035990 // tendon cell differentiation // inferred from sequence or structural similarity /// 0035993 // deltoid tuberosity development // inferred from sequence or structural similarity /// 0040007 // growth // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from genetic interaction /// 0042487 // regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043401 // steroid hormone mediated signaling pathway // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045603 // positive regulation of endothelial cell differentiation // inferred from electronic annotation /// 0045606 // positive regulation of epidermal cell differentiation // inferred from direct assay /// 0045662 // negative regulation of myoblast differentiation // inferred from direct assay /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045778 // positive regulation of ossification // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045839 // negative regulation of mitosis // inferred from direct assay /// 0045843 // negative regulation of striated muscle tissue development // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048286 // lung alveolus development // inferred from direct assay /// 0048333 // mesodermal cell differentiation // inferred from electronic annotation /// 0048392 // intermediate mesodermal cell differentiation // inferred from direct assay /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048660 // regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from sequence or structural similarity /// 0048754 // branching morphogenesis of an epithelial tube // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050918 // positive chemotaxis // inferred from direct assay /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0051150 // regulation of smooth muscle cell differentiation // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0055020 // positive regulation of cardiac muscle fiber development // inferred from mutant phenotype /// 0060113 // inner ear receptor cell differentiation // inferred from electronic annotation /// 0060197 // cloacal septation // inferred from electronic annotation /// 0060235 // lens induction in camera-type eye // inferred from electronic annotation /// 0060272 // embryonic skeletal joint morphogenesis // inferred from electronic annotation /// 0060348 // bone development // inferred from electronic annotation /// 0060363 // cranial suture morphogenesis // inferred from electronic annotation /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from direct assay /// 0060393 // regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0060425 // lung morphogenesis // inferred from direct assay /// 0060429 // epithelium development // inferred from electronic annotation /// 0060433 // bronchus development // inferred from direct assay /// 0060438 // trachea development // inferred from direct assay /// 0060440 // trachea formation // inferred from electronic annotation /// 0060441 // epithelial tube branching involved in lung morphogenesis // inferred from direct assay /// 0060442 // branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0060449 // bud elongation involved in lung branching // inferred from electronic annotation /// 0060502 // epithelial cell proliferation involved in lung morphogenesis // inferred from direct assay /// 0060503 // bud dilation involved in lung branching // inferred from direct assay /// 0060512 // prostate gland morphogenesis // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from direct assay /// 0060592 // mammary gland formation // inferred from electronic annotation /// 0060684 // epithelial-mesenchymal cell signaling // inferred from electronic annotation /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation /// 0060687 // regulation of branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0060688 // regulation of morphogenesis of a branching structure // inferred from electronic annotation /// 0061035 // regulation of cartilage development // inferred from electronic annotation /// 0061036 // positive regulation of cartilage development // inferred from direct assay /// 0061047 // positive regulation of branching involved in lung morphogenesis // inferred from sequence or structural similarity /// 0061149 // BMP signaling pathway involved in ureter morphogenesis // inferred from sequence or structural similarity /// 0061151 // BMP signaling pathway involved in renal system segmentation // inferred from sequence or structural similarity /// 0061155 // pulmonary artery endothelial tube morphogenesis // inferred from direct assay /// 0070244 // negative regulation of thymocyte apoptotic process // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071893 // BMP signaling pathway involved in nephric duct formation // inferred from direct assay /// 0072001 // renal system development // inferred from expression pattern /// 0072015 // glomerular visceral epithelial cell development // inferred from electronic annotation /// 0072097 // negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway // inferred from direct assay /// 0072101 // specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway // inferred from direct assay /// 0072104 // glomerular capillary formation // inferred from sequence or structural similarity /// 0072125 // negative regulation of glomerular mesangial cell proliferation // inferred from direct assay /// 0072138 // mesenchymal cell proliferation involved in ureteric bud development // inferred from electronic annotation /// 0072161 // mesenchymal cell differentiation involved in kidney development // inferred from electronic annotation /// 0072192 // ureter epithelial cell differentiation // inferred from sequence or structural similarity /// 0072193 // ureter smooth muscle cell differentiation // inferred from sequence or structural similarity /// 0072198 // mesenchymal cell proliferation involved in ureter development // inferred from electronic annotation /// 0072200 // negative regulation of mesenchymal cell proliferation involved in ureter development // inferred from direct assay /// 0072205 // metanephric collecting duct development // inferred from sequence or structural similarity /// 0090184 // positive regulation of kidney development // inferred from direct assay /// 0090191 // negative regulation of branching involved in ureteric bud morphogenesis // inferred from direct assay /// 0090194 // negative regulation of glomerulus development // inferred from direct assay /// 2000005 // negative regulation of metanephric S-shaped body morphogenesis // inferred from direct assay /// 2000007 // negative regulation of metanephric comma-shaped body morphogenesis // inferred from direct assay /// 2000105 // positive regulation of DNA-dependent DNA replication // inferred from direct assay /// 2000137 // negative regulation of cell proliferation involved in heart morphogenesis // inferred from mutant phenotype /// 2001012 // mesenchymal cell differentiation involved in renal system development // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity </td> <td> 0005125 // cytokine activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0042056 // chemoattractant activity // inferred from direct assay /// 0070700 // BMP receptor binding // inferred from direct assay </td> <td> 145.80 </td> <td> 150.90 </td> <td> 7.74 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202279_at </td> <td> 202279_at </td> <td> NM_004894 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004894.1 /DEF=Homo sapiens chromosome 14 open reading frame 2 (C14ORF2), mRNA. /FEA=mRNA /GEN=C14ORF2 /PROD=chromosome 14 open reading frame 2 /DB_XREF=gi:4758939 /UG=Hs.109052 chromosome 14 open reading frame 2 /FL=gb:BC000429.1 gb:BC001944.1 gb:AF054175.1 gb:NM_004894.1 </td> <td> NM_004894 </td> <td> chromosome 14 open reading frame 2 </td> <td> C14orf2 </td> <td> 9556 </td> <td> NM_001127393 /// NM_004894 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td>  </td> <td> 122.78 </td> <td> 291.31 </td> <td> 7.73 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200828_s_at </td> <td> 200828_s_at </td> <td> BE871379 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE871379 /FEA=EST /DB_XREF=gi:10320155 /DB_XREF=est:601449306F1 /CLONE=IMAGE:3853200 /UG=Hs.62112 zinc finger protein 207 /FL=gb:AF046001.1 gb:NM_003457.1 </td> <td> BE871379 </td> <td> zinc finger protein 207 </td> <td> ZNF207 </td> <td> 7756 </td> <td> NM_001032293 /// NM_001098507 /// NM_003457 /// XM_005258028 /// XM_005258029 /// XM_005258030 </td> <td> 0000070 // mitotic sister chromatid segregation // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // inferred from mutant phenotype /// 0008608 // attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051983 // regulation of chromosome segregation // inferred from mutant phenotype </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from mutant phenotype /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 349.95 </td> <td> 800.83 </td> <td> 7.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201999_s_at </td> <td> 201999_s_at </td> <td> NM_006519 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006519.1 /DEF=Homo sapiens t-complex-associated-testis-expressed 1-like 1 (TCTEL1), mRNA.  /FEA=mRNA /GEN=TCTEL1 /PROD=t-complex-associated-testis-expressed 1-like 1 /DB_XREF=gi:5730084 /UG=Hs.266940 t-complex-associated-testis-expressed 1-like 1 /FL=gb:U56255.1 gb:D50663.1 gb:NM_006519.1 </td> <td> NM_006519 </td> <td> dynein, light chain, Tctex-type 1 </td> <td> DYNLT1 </td> <td> 6993 </td> <td> NM_001291602 /// NM_001291603 /// NM_006519 /// XM_005267117 </td> <td> 0000132 // establishment of mitotic spindle orientation // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from sequence or structural similarity /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019060 // intracellular transport of viral protein in host cell // inferred from mutant phenotype /// 0032314 // regulation of Rac GTPase activity // inferred from electronic annotation /// 0046718 // viral entry into host cell // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from sequence or structural similarity /// 0051301 // cell division // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // inferred from electronic annotation /// 0075521 // microtubule-dependent intracellular transport of viral material towards nucleus // inferred from electronic annotation /// 0075606 // transport of viral material towards nucleus // inferred from electronic annotation /// 0075733 // intracellular transport of virus // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from sequence or structural similarity /// 0005874 // microtubule // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation </td> <td> 0003774 // motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 198.97 </td> <td> 650.99 </td> <td> 7.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 217945_at </td> <td> 217945_at </td> <td> NM_025238 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025238.1 /DEF=Homo sapiens BTB (POZ) domain containing 1 (BTBD1), mRNA. /FEA=mRNA /GEN=BTBD1 /PROD=BTB (POZ) domain containing 1 /DB_XREF=gi:13376847 /UG=Hs.21332 BTB (POZ) domain containing 1 /FL=gb:AL136853.1 gb:AF257241.1 gb:NM_025238.1 gb:AF355402.1 </td> <td> NM_025238 </td> <td> BTB (POZ) domain containing 1 </td> <td> BTBD1 </td> <td> 53339 </td> <td> NM_001011885 /// NM_025238 /// XM_006720573 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043393 // regulation of protein binding // non-traceable author statement </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 93.05 </td> <td> 248.45 </td> <td> 7.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213449_at </td> <td> 213449_at </td> <td> D31765 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D31765.1 /DEF=Human mRNA for KIAA0061 gene, partial cds. /FEA=mRNA /GEN=KIAA0061 /DB_XREF=gi:498155 /UG=Hs.170114 KIAA0061 protein </td> <td> D31765 </td> <td> processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) </td> <td> POP1 </td> <td> 10940 </td> <td> NM_001145860 /// NM_001145861 /// NM_015029 </td> <td> 0001682 // tRNA 5'-leader removal // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0016078 // tRNA catabolic process // inferred from direct assay /// 0090501 // RNA phosphodiester bond hydrolysis // inferred from direct assay /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from direct assay /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation </td> <td> 0000172 // ribonuclease MRP complex // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005655 // nucleolar ribonuclease P complex // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation </td> <td> 0000171 // ribonuclease MRP activity // inferred from direct assay /// 0004526 // ribonuclease P activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 67.75 </td> <td> 53.25 </td> <td> 7.71 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204567_s_at </td> <td> 204567_s_at </td> <td> NM_004915 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004915.2 /DEF=Homo sapiens ATP-binding cassette, sub-family G (WHITE), member 1 (ABCG1), transcript variant 1, mRNA.  /FEA=mRNA /GEN=ABCG1 /PROD=ATP-binding cassette sub-family G member 1isoform a /DB_XREF=gi:8051574 /UG=Hs.10237 ATP-binding cassette, sub-family G (WHITE), member 1 /FL=gb:NM_004915.2 </td> <td> NM_004915 </td> <td> ATP-binding cassette, sub-family G (WHITE), member 1 </td> <td> ABCG1 </td> <td> 9619 </td> <td> NM_004915 /// NM_016818 /// NM_207174 /// NM_207627 /// NM_207628 /// NM_207629 /// NM_207630 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from direct assay /// 0009720 // detection of hormone stimulus // non-traceable author statement /// 0010033 // response to organic substance // inferred from direct assay /// 0010745 // negative regulation of macrophage derived foam cell differentiation // traceable author statement /// 0010872 // regulation of cholesterol esterification // inferred from sequence or structural similarity /// 0010875 // positive regulation of cholesterol efflux // inferred from electronic annotation /// 0010887 // negative regulation of cholesterol storage // traceable author statement /// 0010888 // negative regulation of lipid storage // inferred from electronic annotation /// 0030301 // cholesterol transport // inferred from electronic annotation /// 0032367 // intracellular cholesterol transport // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from direct assay /// 0033700 // phospholipid efflux // inferred from mutant phenotype /// 0033993 // response to lipid // inferred from direct assay /// 0034374 // low-density lipoprotein particle remodeling // inferred from sequence or structural similarity /// 0034375 // high-density lipoprotein particle remodeling // inferred from sequence or structural similarity /// 0034436 // glycoprotein transport // inferred from direct assay /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0042987 // amyloid precursor protein catabolic process // inferred from direct assay /// 0043691 // reverse cholesterol transport // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0045542 // positive regulation of cholesterol biosynthetic process // inferred from sequence or structural similarity /// 0055085 // transmembrane transport // traceable author statement /// 0055091 // phospholipid homeostasis // inferred from mutant phenotype /// 0055099 // response to high density lipoprotein particle // inferred from electronic annotation /// 1901998 // toxin transport // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005768 // endosome // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred by curator /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005543 // phospholipid binding // inferred by curator /// 0005548 // phospholipid transporter activity // inferred from direct assay /// 0015485 // cholesterol binding // inferred by curator /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from direct assay /// 0017127 // cholesterol transporter activity // traceable author statement /// 0019534 // toxin transporter activity // inferred from direct assay /// 0034041 // sterol-transporting ATPase activity // inferred from direct assay /// 0034437 // glycoprotein transporter activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043531 // ADP binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // non-traceable author statement </td> <td> -193.50 </td> <td> 138.85 </td> <td> -7.71 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218307_at </td> <td> 218307_at </td> <td> NM_018346 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018346.1 /DEF=Homo sapiens hypothetical protein FLJ11164 (FLJ11164), mRNA. /FEA=mRNA /GEN=FLJ11164 /PROD=hypothetical protein FLJ11164 /DB_XREF=gi:8922910 /UG=Hs.8033 hypothetical protein FLJ11164 /FL=gb:NM_018346.1 </td> <td> NM_018346 </td> <td> radical S-adenosyl methionine domain containing 1 </td> <td> RSAD1 </td> <td> 55316 </td> <td> NM_018346 </td> <td> 0006779 // porphyrin-containing compound biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004109 // coproporphyrinogen oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation </td> <td> 101.58 </td> <td> 89.81 </td> <td> 7.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200921_s_at </td> <td> 200921_s_at </td> <td> NM_001731 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001731.1 /DEF=Homo sapiens B-cell translocation gene 1, anti-proliferative (BTG1), mRNA.  /FEA=mRNA /GEN=BTG1 /PROD=B-cell translocation protein 1 /DB_XREF=gi:4502472 /UG=Hs.77054 B-cell translocation gene 1, anti-proliferative /FL=gb:NM_001731.1 </td> <td> NM_001731 </td> <td> B-cell translocation gene 1, anti-proliferative </td> <td> BTG1 </td> <td> 694 </td> <td> NM_001731 </td> <td> 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016477 // cell migration // non-traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0045603 // positive regulation of endothelial cell differentiation // inferred from mutant phenotype /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0045663 // positive regulation of myoblast differentiation // non-traceable author statement /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 2000271 // positive regulation of fibroblast apoptotic process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from mutant phenotype </td> <td> 0003712 // transcription cofactor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019900 // kinase binding // non-traceable author statement </td> <td> -375.83 </td> <td> 483.81 </td> <td> -7.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201065_s_at </td> <td> 201065_s_at </td> <td> NM_001518 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001518.1 /DEF=Homo sapiens general transcription factor II, i (GTF2I), mRNA. /FEA=mRNA /GEN=GTF2I /PROD=general transcription factor II, i /DB_XREF=gi:4504202 /UG=Hs.278589 general transcription factor II, i /FL=gb:U77948.1 gb:AF015553.1 gb:AF038969.1 gb:NM_001518.1 </td> <td> NM_001518 </td> <td> general transcription factor IIi /// general transcription factor IIi, pseudogene 1 /// general transcription factor II, i, pseudogene </td> <td> GTF2I /// GTF2IP1 /// LOC100093631 </td> <td> 2969 /// 2970 /// 100093631 </td> <td> NM_001163636 /// NM_001280800 /// NM_001518 /// NM_032999 /// NM_033000 /// NM_033001 /// NR_002206 /// NR_003580 /// XM_005250291 /// XM_005250296 /// XM_006715939 /// XM_006715940 /// XM_006715941 /// XM_006715942 /// XM_006715943 /// XM_006715944 /// XM_006715945 /// XM_006715946 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0051481 // negative regulation of cytosolic calcium ion concentration // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0051019 // mitogen-activated protein kinase binding // inferred from electronic annotation </td> <td> 166.62 </td> <td> 311.39 </td> <td> 7.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 222369_at </td> <td> 222369_at </td> <td> AW971254 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW971254 /FEA=EST /DB_XREF=gi:8161099 /DB_XREF=est:EST383343 /UG=Hs.178433 ESTs </td> <td> AW971254 </td> <td> N(alpha)-acetyltransferase 40, NatD catalytic subunit </td> <td> NAA40 </td> <td> 79829 </td> <td> NM_024771 /// XM_005274295 /// XM_005274296 /// XM_006718689 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation </td> <td>  </td> <td> 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation </td> <td> 61.52 </td> <td> 55.84 </td> <td> 7.67 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202128_at </td> <td> 202128_at </td> <td> NM_014821 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014821.1 /DEF=Homo sapiens KIAA0317 gene product (KIAA0317), mRNA. /FEA=mRNA /GEN=KIAA0317 /PROD=KIAA0317 gene product /DB_XREF=gi:7662051 /UG=Hs.20126 KIAA0317 gene product /FL=gb:AB002315.1 gb:NM_014821.1 </td> <td> NM_014821 </td> <td> apoptosis resistant E3 ubiquitin protein ligase 1 </td> <td> AREL1 </td> <td> 9870 </td> <td> NM_001039479 /// NM_014821 /// XM_005268244 /// XM_006720344 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay </td> <td> 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // not recorded /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> 81.50 </td> <td> 139.78 </td> <td> 7.67 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209250_at </td> <td> 209250_at </td> <td> BC000961 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000961.2 /DEF=Homo sapiens, degenerative spermatocyte (homolog Drosophila; lipid desaturase), clone MGC:5079, mRNA, complete cds.  /FEA=mRNA /PROD=degenerative spermatocyte (homolog Drosophila;lipid desaturase) /DB_XREF=gi:12803018 /UG=Hs.185973 degenerative spermatocyte (homolog Drosophila; lipid desaturase) /FL=gb:BC000961.2 </td> <td> BC000961 </td> <td> delta(4)-desaturase, sphingolipid 1 </td> <td> DEGS1 </td> <td> 8560 </td> <td> NM_003676 /// NM_144780 /// XM_006711839 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006636 // unsaturated fatty acid biosynthetic process // traceable author statement /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation </td> <td> 131.95 </td> <td> 150.20 </td> <td> 7.67 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201703_s_at </td> <td> 201703_s_at </td> <td> NM_002714 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002714.1 /DEF=Homo sapiens protein phosphatase 1, regulatory subunit 10 (PPP1R10), mRNA.  /FEA=mRNA /GEN=PPP1R10 /PROD=protein phosphatase 1, regulatory subunit 10 /DB_XREF=gi:4506008 /UG=Hs.106019 protein phosphatase 1, regulatory subunit 10 /FL=gb:NM_002714.1 </td> <td> NM_002714 </td> <td> protein phosphatase 1, regulatory subunit 10 </td> <td> PPP1R10 </td> <td> 5514 </td> <td> NM_002714 /// NR_072994 /// XM_006715130 /// XM_006715131 /// XM_006715132 /// XM_006715133 /// XM_006725489 /// XM_006725490 /// XM_006725491 /// XM_006725492 /// XM_006725703 /// XM_006725704 /// XM_006725705 /// XM_006725706 /// XM_006725820 /// XM_006725821 /// XM_006725822 /// XM_006725823 /// XM_006725912 /// XM_006725913 /// XM_006725914 /// XM_006725915 /// XM_006726005 /// XM_006726006 /// XM_006726007 /// XM_006726008 /// XM_006726100 /// XM_006726101 /// XM_006726102 /// XM_006726103 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006606 // protein import into nucleus // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation </td> <td> 0000785 // chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -118.40 </td> <td> 247.32 </td> <td> -7.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 208774_at </td> <td> 208774_at </td> <td> AV700224 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV700224 /FEA=EST /DB_XREF=gi:10302195 /DB_XREF=est:AV700224 /CLONE=GKCARG01 /UG=Hs.75852 casein kinase 1, delta /FL=gb:BC003558.1 </td> <td> AV700224 </td> <td> casein kinase 1, delta </td> <td> CSNK1D </td> <td> 1453 </td> <td> NM_001893 /// NM_139062 /// NR_110578 /// XM_005256336 /// XM_005256337 /// XR_243518 /// XR_430027 /// XR_430028 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0006281 // DNA repair // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from direct assay /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0050321 // tau-protein kinase activity // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation </td> <td> 192.22 </td> <td> 132.36 </td> <td> 7.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203512_at </td> <td> 203512_at </td> <td> NM_014408 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014408.1 /DEF=Homo sapiens similar to yeast BET3 (S. cerevisiae) (BET3), mRNA. /FEA=mRNA /GEN=BET3 /PROD=similar to yeast BET3 (S. cerevisiae) /DB_XREF=gi:7656925 /UG=Hs.288013 similar to yeast BET3 (S. cerevisiae) /FL=gb:AF041432.1 gb:NM_014408.1 </td> <td> NM_014408 </td> <td> trafficking protein particle complex 3 </td> <td> TRAPPC3 </td> <td> 27095 </td> <td> NM_001270894 /// NM_001270895 /// NM_001270896 /// NM_001270897 /// NM_014408 /// NR_073097 /// NR_073098 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0030008 // TRAPP complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 91.33 </td> <td> 129.69 </td> <td> 7.65 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202271_at </td> <td> 202271_at </td> <td> AB007952 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB007952.1 /DEF=Homo sapiens mRNA for KIAA0483 protein, partial cds. /FEA=mRNA /GEN=KIAA0483 /PROD=KIAA0483 protein /DB_XREF=gi:3413925 /UG=Hs.64691 KIAA0483 protein /FL=gb:NM_015176.1 </td> <td> AB007952 </td> <td> F-box protein 28 </td> <td> FBXO28 </td> <td> 23219 </td> <td> NM_001136115 /// NM_015176 /// NR_049764 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 104.70 </td> <td> 207.35 </td> <td> 7.65 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212993_at </td> <td> 212993_at </td> <td> AA114166 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA114166 /FEA=EST /DB_XREF=gi:1668052 /DB_XREF=est:zn75c03.s1 /CLONE=IMAGE:564004 /UG=Hs.23964 sin3-associated polypeptide, 18kD </td> <td> AA114166 </td> <td> NACC family member 2, BEN and BTB (POZ) domain containing </td> <td> NACC2 </td> <td> 138151 </td> <td> NM_144653 </td> <td> 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010608 // posttranscriptional regulation of gene expression // inferred from mutant phenotype /// 0016575 // histone deacetylation // inferred from direct assay /// 0034629 // cellular protein complex localization // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from sequence or structural similarity /// 1900477 // negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 1902231 // positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage // inferred from direct assay </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0016581 // NuRD complex // inferred from direct assay /// 0016604 // nuclear body // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0004407 // histone deacetylase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042826 // histone deacetylase binding // inferred from physical interaction </td> <td> 68.52 </td> <td> 86.06 </td> <td> 7.63 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 211423_s_at </td> <td> 211423_s_at </td> <td> D85181 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D85181.1 /DEF=Homo sapiens mRNA for fungal sterol-C5-desaturase homolog, complete cds.  /FEA=mRNA /PROD=fungal sterol-C5-desaturase homolog /DB_XREF=gi:1906795 /UG=Hs.288031 sterol-C5-desaturase (fungal ERG3, delta-5-desaturase)-like /FL=gb:D85181.1 </td> <td> D85181 </td> <td> sterol-C5-desaturase </td> <td> SC5D </td> <td> 6309 </td> <td> NM_001024956 /// NM_006918 </td> <td> 0006629 // lipid metabolic process // traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0033490 // cholesterol biosynthetic process via lathosterol // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0000248 // C-5 sterol desaturase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050046 // lathosterol oxidase activity // inferred from electronic annotation </td> <td> 149.03 </td> <td> 157.26 </td> <td> 7.62 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 205335_s_at </td> <td> 205335_s_at </td> <td> NM_003135 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003135.1 /DEF=Homo sapiens signal recognition particle 19kD (SRP19), mRNA. /FEA=mRNA /GEN=SRP19 /PROD=signal recognition particle 19kD /DB_XREF=gi:4507212 /UG=Hs.2943 signal recognition particle 19kD /FL=gb:NM_003135.1 </td> <td> NM_003135 </td> <td> signal recognition particle 19kDa </td> <td> SRP19 </td> <td> 6728 </td> <td> NM_001204193 /// NM_001204194 /// NM_001204196 /// NM_001204199 /// NM_003135 </td> <td> 0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042493 // response to drug // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005786 // signal recognition particle, endoplasmic reticulum targeting // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0048500 // signal recognition particle // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0008312 // 7S RNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 92.60 </td> <td> 317.40 </td> <td> 7.61 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202769_at </td> <td> 202769_at </td> <td> AW134535 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW134535 /FEA=EST /DB_XREF=gi:6138088 /DB_XREF=est:UI-H-BI1-abv-g-06-0-UI.s1 /CLONE=IMAGE:2713163 /UG=Hs.79069 cyclin G2 /FL=gb:U47414.1 gb:NM_004354.1 </td> <td> AW134535 </td> <td> cyclin G2 </td> <td> CCNG2 </td> <td> 901 </td> <td> NM_004354 </td> <td> 0000075 // cell cycle checkpoint // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td>  </td> <td> -185.97 </td> <td> 161.51 </td> <td> -7.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209378_s_at </td> <td> 209378_s_at </td> <td> AI478879 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI478879 /FEA=EST /DB_XREF=gi:4372047 /DB_XREF=est:tm25a06.x1 /CLONE=IMAGE:2157586 /UG=Hs.81897 KIAA1128 protein /FL=gb:AF241785.1 </td> <td> AI478879 </td> <td> coiled-coil serine-rich protein 2 </td> <td> CCSER2 </td> <td> 54462 </td> <td> NM_001284240 /// NM_001284241 /// NM_001284242 /// NM_001284243 /// NM_018999 /// XM_005269905 /// XM_005269906 /// XM_005269908 /// XM_006717894 /// XM_006717895 </td> <td> 0001578 // microtubule bundle formation // inferred from electronic annotation </td> <td> 0015630 // microtubule cytoskeleton // inferred from electronic annotation </td> <td> 0008017 // microtubule binding // inferred from electronic annotation </td> <td> -97.47 </td> <td> 113.81 </td> <td> -7.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201920_at </td> <td> 201920_at </td> <td> NM_005415 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005415.2 /DEF=Homo sapiens solute carrier family 20 (phosphate transporter), member 1 (SLC20A1), mRNA.  /FEA=mRNA /GEN=SLC20A1 /PROD=solute carrier family 20 (phosphatetransporter), member 1 /DB_XREF=gi:7382462 /UG=Hs.78452 solute carrier family 20 (phosphate transporter), member 1 /FL=gb:L20859.1 gb:NM_005415.2 </td> <td> NM_005415 </td> <td> solute carrier family 20 (phosphate transporter), member 1 </td> <td> SLC20A1 </td> <td> 6574 </td> <td> NM_005415 /// XM_005263743 /// XM_006712712 </td> <td> 0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006817 // phosphate ion transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0035435 // phosphate ion transmembrane transport // inferred from electronic annotation /// 0035435 // phosphate ion transmembrane transport // traceable author statement /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0004872 // receptor activity // traceable author statement /// 0005315 // inorganic phosphate transmembrane transporter activity // inferred from electronic annotation /// 0005316 // high affinity inorganic phosphate:sodium symporter activity // inferred from electronic annotation /// 0005436 // sodium:phosphate symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation </td> <td> 290.00 </td> <td> 536.40 </td> <td> 7.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201984_s_at </td> <td> 201984_s_at </td> <td> NM_005228 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005228.1 /DEF=Homo sapiens epidermal growth factor receptor (avian erythroblastic leukemia viral (v-erb-b) oncogene homolog) (EGFR), mRNA.  /FEA=mRNA /GEN=EGFR /PROD=epidermal growth factor receptor (avianerythroblastic leukemia viral (v-erb-b) oncogene homolog) /DB_XREF=gi:4885198 /UG=Hs.77432 epidermal growth factor receptor (avian erythroblastic leukemia viral (v-erb-b) oncogene homolog) /FL=gb:NM_005228.1 </td> <td> NM_005228 </td> <td> epidermal growth factor receptor </td> <td> EGFR </td> <td> 1956 </td> <td> NM_005228 /// NM_201282 /// NM_201283 /// NM_201284 </td> <td> 0000165 // MAPK cascade // non-traceable author statement /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001503 // ossification // non-traceable author statement /// 0001889 // liver development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001942 // hair follicle development // inferred from electronic annotation /// 0005976 // polysaccharide metabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // non-traceable author statement /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008544 // epidermis development // inferred from electronic annotation /// 0010960 // magnesium ion homeostasis // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016101 // diterpenoid metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from mutant phenotype /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0019694 // alkanesulfonate metabolic process // inferred from electronic annotation /// 0021795 // cerebral cortex cell migration // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0031659 // positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle // inferred from direct assay /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032930 // positive regulation of superoxide anion generation // inferred from electronic annotation /// 0033590 // response to cobalamin // inferred from electronic annotation /// 0033594 // response to hydroxyisoflavone // inferred from electronic annotation /// 0033993 // response to lipid // inferred from electronic annotation /// 0035413 // positive regulation of catenin import into nucleus // inferred from mutant phenotype /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0042698 // ovulation cycle // inferred from electronic annotation /// 0042743 // hydrogen peroxide metabolic process // inferred from electronic annotation /// 0043006 // activation of phospholipase A2 activity by calcium-mediated signaling // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043586 // tongue development // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0045739 // positive regulation of DNA repair // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0045909 // positive regulation of vasodilation // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048143 // astrocyte activation // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0050999 // regulation of nitric-oxide synthase activity // inferred from direct assay /// 0051205 // protein insertion into membrane // traceable author statement /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from mutant phenotype /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0060571 // morphogenesis of an epithelial fold // inferred from electronic annotation /// 0070141 // response to UV-A // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from sequence or structural similarity /// 0071392 // cellular response to estradiol stimulus // inferred from direct assay /// 0071549 // cellular response to dexamethasone stimulus // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // traceable author statement /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070435 // Shc-EGFR complex // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from mutant phenotype /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004716 // receptor signaling protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // non-traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0030235 // nitric-oxide synthase regulator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0048408 // epidermal growth factor binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay </td> <td> -72.65 </td> <td> 88.67 </td> <td> -7.58 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202716_at </td> <td> 202716_at </td> <td> NM_002827 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002827.1 /DEF=Homo sapiens protein tyrosine phosphatase, non-receptor type 1 (PTPN1), mRNA.  /FEA=mRNA /GEN=PTPN1 /PROD=protein tyrosine phosphatase, non-receptor type1 /DB_XREF=gi:4506288 /UG=Hs.155894 protein tyrosine phosphatase, non-receptor type 1 /FL=gb:M33689.1 gb:M31724.1 gb:NM_002827.1 </td> <td> NM_002827 </td> <td> protein tyrosine phosphatase, non-receptor type 1 </td> <td> PTPN1 </td> <td> 5770 </td> <td> NM_001278618 /// NM_002827 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from mutant phenotype /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030100 // regulation of endocytosis // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030948 // negative regulation of vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from mutant phenotype /// 0035791 // platelet-derived growth factor receptor-beta signaling pathway // inferred from mutant phenotype /// 0046626 // regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // non-traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 1902202 // regulation of hepatocyte growth factor receptor signaling pathway // inferred from mutant phenotype /// 1990264 // peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity // inferred from sequence or structural similarity </td> <td> 0005769 // early endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0097443 // sorting endosome // inferred from sequence or structural similarity </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046875 // ephrin receptor binding // inferred from physical interaction </td> <td> 81.15 </td> <td> 145.78 </td> <td> 7.58 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203439_s_at </td> <td> 203439_s_at </td> <td> BC000658 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000658.1 /DEF=Homo sapiens, stanniocalcin 2, clone MGC:1881, mRNA, complete cds. /FEA=mRNA /PROD=stanniocalcin 2 /DB_XREF=gi:12653744 /UG=Hs.155223 stanniocalcin 2 /FL=gb:BC000658.1 gb:AF055460.1 gb:AB012664.1 gb:AF098462.1 gb:AF031036.1 gb:NM_003714.1 </td> <td> BC000658 </td> <td> stanniocalcin 2 </td> <td> STC2 </td> <td> 8614 </td> <td> NM_003714 </td> <td> 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007584 // response to nutrient // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from electronic annotation /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 2001256 // regulation of store-operated calcium entry // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation </td> <td> 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -224.38 </td> <td> 209.46 </td> <td> -7.57 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 217127_at </td> <td> 217127_at </td> <td> AL354872 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL354872 /DEF=Human DNA sequence from clone RP11-42O15 on chromosome 1. Contains ESTs, STSs, GSSs and a CpG island. Contains the CTH gene for two isoforms of cystathionase (cystathionine gamma-lyase) and a CHORD containing protein 1 (CHP1) pseudogene /FEA=mRNA_1 /DB_XREF=gi:9717070 /UG=Hs.19904 cystathionase (cystathionine gamma-lyase) </td> <td> AL354872 </td> <td> cystathionine gamma-lyase </td> <td> CTH </td> <td> 1491 </td> <td> NM_001190463 /// NM_001902 /// NM_153742 /// XM_005270509 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0000098 // sulfur amino acid catabolic process // traceable author statement /// 0006534 // cysteine metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0018272 // protein-pyridoxal-5-phosphate linkage via peptidyl-N6-pyridoxal phosphate-L-lysine // inferred from direct assay /// 0019344 // cysteine biosynthetic process // inferred from direct assay /// 0019344 // cysteine biosynthetic process // inferred from electronic annotation /// 0019346 // transsulfuration // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0044524 // protein sulfhydration // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from physical interaction /// 0070814 // hydrogen sulfide biosynthetic process // inferred from direct assay /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004123 // cystathionine gamma-lyase activity // inferred from direct assay /// 0004123 // cystathionine gamma-lyase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016846 // carbon-sulfur lyase activity // traceable author statement /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0044540 // L-cystine L-cysteine-lyase (deaminating) // inferred from mutant phenotype /// 0047982 // homocysteine desulfhydrase activity // traceable author statement /// 0080146 // L-cysteine desulfhydrase activity // traceable author statement </td> <td> -69.65 </td> <td> 58.93 </td> <td> -7.57 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 205005_s_at </td> <td> 205005_s_at </td> <td> AW293531 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW293531 /FEA=EST /DB_XREF=gi:6700167 /DB_XREF=est:UI-H-BI2-ahq-d-03-0-UI.s1 /CLONE=IMAGE:2727604 /UG=Hs.122647 N-myristoyltransferase 2 /FL=gb:AF043325.1 gb:NM_004808.1 </td> <td> AW293531 </td> <td> N-myristoyltransferase 2 </td> <td> NMT2 </td> <td> 9397 </td> <td> NM_004808 /// XM_005252642 /// XM_005252643 /// XM_006717539 </td> <td> 0006499 // N-terminal protein myristoylation // inferred from electronic annotation /// 0007603 // phototransduction, visible light // traceable author statement /// 0009249 // protein lipoylation // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019082 // viral protein processing // traceable author statement /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0003824 // catalytic activity // traceable author statement /// 0004379 // glycylpeptide N-tetradecanoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation </td> <td> 124.77 </td> <td> 209.84 </td> <td> 7.57 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212508_at </td> <td> 212508_at </td> <td> AK024029 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024029.1 /DEF=Homo sapiens cDNA FLJ13967 fis, clone Y79AA1001402, weakly similar to Homo sapiens paraneoplastic cancer-testis-brain antigen (MA4) mRNA.  /FEA=mRNA /DB_XREF=gi:10436287 /UG=Hs.24719 modulator of apoptosis 1 /FL=gb:AF305550.1 gb:NM_022151.1 </td> <td> AK024029 </td> <td> modulator of apoptosis 1 </td> <td> MOAP1 </td> <td> 64112 </td> <td> NM_022151 </td> <td> 0001844 // protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // inferred from direct assay /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from mutant phenotype /// 0030262 // apoptotic nuclear changes // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0097190 // apoptotic signaling pathway // inferred from direct assay /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> 61.27 </td> <td> 38.96 </td> <td> 7.57 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 220924_s_at </td> <td> 220924_s_at </td> <td> NM_018976 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018976.1 /DEF=Homo sapiens amino acid transporter 2 (KIAA1382), mRNA. /FEA=mRNA /GEN=KIAA1382 /PROD=amino acid transporter 2 /DB_XREF=gi:9506836 /UG=Hs.298275 amino acid transporter 2 /FL=gb:NM_018976.1 </td> <td> NM_018976 </td> <td> solute carrier family 38, member 2 </td> <td> SLC38A2 </td> <td> 54407 </td> <td> NM_018976 /// XM_005268983 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0014047 // glutamate secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation </td> <td> -945.80 </td> <td> 1723.42 </td> <td> -7.56 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201129_at </td> <td> 201129_at </td> <td> NM_006276 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006276.2 /DEF=Homo sapiens splicing factor, arginineserine-rich 7 (35kD) (SFRS7), mRNA.  /FEA=mRNA /GEN=SFRS7 /PROD=splicing factor, arginineserine-rich 7 (35kD) /DB_XREF=gi:6857827 /UG=Hs.184167 splicing factor, arginineserine-rich 7 (35kD) /FL=gb:BC000997.2 gb:L22253.1 gb:NM_006276.2 </td> <td> NM_006276 </td> <td> serine/arginine-rich splicing factor 7 </td> <td> SRSF7 </td> <td> 6432 </td> <td> NM_001031684 /// NM_001195446 /// NM_006276 /// XM_005264484 /// XM_005264485 /// XM_005264486 /// XR_426994 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 74.08 </td> <td> 141.41 </td> <td> 7.55 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203580_s_at </td> <td> 203580_s_at </td> <td> NM_003983 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003983.1 /DEF=Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 (SLC7A6), mRNA.  /FEA=mRNA /GEN=SLC7A6 /PROD=solute carrier family 7 (cationic amino acidtransporter, y+ system), member 6 /DB_XREF=gi:4507052 /UG=Hs.10315 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 /FL=gb:D87432.1 gb:NM_003983.1 </td> <td> NM_003983 </td> <td> solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 </td> <td> SLC7A6 </td> <td> 9057 </td> <td> NM_001076785 /// NM_003983 /// XR_243433 /// XR_429735 /// XR_429736 /// XR_429737 /// XR_429738 /// XR_429739 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation </td> <td> 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation </td> <td> 129.00 </td> <td> 132.28 </td> <td> 7.55 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202670_at </td> <td> 202670_at </td> <td> AI571419 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI571419 /FEA=EST /DB_XREF=gi:4534793 /DB_XREF=est:tn45h10.x1 /CLONE=IMAGE:2170627 /UG=Hs.3446 mitogen-activated protein kinase kinase 1 /FL=gb:L05624.1 gb:NM_002755.1 </td> <td> AI571419 </td> <td> mitogen-activated protein kinase kinase 1 </td> <td> MAP2K1 </td> <td> 5604 </td> <td> NM_002755 /// XM_005254541 /// XM_006720608 </td> <td> 0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003056 // regulation of vascular smooth muscle contraction // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0032402 // melanosome transport // inferred from electronic annotation /// 0032872 // regulation of stress-activated MAPK cascade // traceable author statement /// 0032968 // positive regulation of transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0034111 // negative regulation of homotypic cell-cell adhesion // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0047496 // vesicle transport along microtubule // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048313 // Golgi inheritance // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0048870 // cell motility // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0060711 // labyrinthine layer development // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 0090170 // regulation of Golgi inheritance // traceable author statement /// 0090398 // cellular senescence // inferred from mutant phenotype /// 2000641 // regulation of early endosome to late endosome transport // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005769 // early endosome // traceable author statement /// 0005770 // late endosome // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005816 // spindle pole body // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004708 // MAP kinase kinase activity // inferred from direct assay /// 0004712 // protein serine/threonine/tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004728 // receptor signaling protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017016 // Ras GTPase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation /// 0043539 // protein serine/threonine kinase activator activity // inferred from direct assay </td> <td> -266.03 </td> <td> 403.01 </td> <td> -7.55 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218283_at </td> <td> 218283_at </td> <td> NM_016305 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016305.1 /DEF=Homo sapiens kiaa-iso protein (LOC51188), mRNA. /FEA=mRNA /GEN=LOC51188 /PROD=kiaa-iso protein /DB_XREF=gi:10047103 /UG=Hs.9774 kiaa-iso protein /FL=gb:NM_016305.1 gb:AF201950.1 </td> <td> NM_016305 </td> <td> synovial sarcoma translocation gene on chromosome 18-like 2 </td> <td> SS18L2 </td> <td> 51188 </td> <td> NM_016305 </td> <td>  </td> <td>  </td> <td>  </td> <td> 83.40 </td> <td> 111.22 </td> <td> 7.54 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201616_s_at </td> <td> 201616_s_at </td> <td> AL577531 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL577531 /FEA=EST /DB_XREF=gi:12940753 /DB_XREF=est:AL577531 /CLONE=CS0DI087YP20 (3 prime) /UG=Hs.325474 caldesmon 1 /FL=gb:NM_004342.2 gb:M64110.1 </td> <td> AL577531 </td> <td> caldesmon 1 </td> <td> CALD1 </td> <td> 800 </td> <td> NM_004342 /// NM_033138 /// NM_033139 /// NM_033140 /// NM_033157 /// XM_006716136 /// XM_006716137 /// XM_006716138 /// XM_006716139 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030478 // actin cap // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation </td> <td> -240.00 </td> <td> 555.35 </td> <td> -7.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 208726_s_at </td> <td> 208726_s_at </td> <td> BC000461 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000461.1 /DEF=Homo sapiens, eukaryotic translation initiation factor 2, subunit 2 (beta, 38kD ), clone MGC:8508, mRNA, complete cds.  /FEA=mRNA /PROD=eukaryotic translation initiation factor 2,subunit 2 (beta, 38kD ) /DB_XREF=gi:12653382 /UG=Hs.12163 eukaryotic translation initiation factor 2, subunit 2 (beta, 38kD ) /FL=gb:BC000461.1 gb:BC000934.2 gb:M29536.1 gb:NM_003908.1 </td> <td> BC000461 </td> <td> eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa </td> <td> EIF2S2 </td> <td> 8894 </td> <td> NM_003908 /// XM_005260605 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002176 // male germ cell proliferation // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005850 // eukaryotic translation initiation factor 2 complex // traceable author statement </td> <td> 0003723 // RNA binding // traceable author statement /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -288.10 </td> <td> 908.15 </td> <td> -7.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202975_s_at </td> <td> 202975_s_at </td> <td> N21138 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N21138 /FEA=EST /DB_XREF=gi:1126308 /DB_XREF=est:yx52h03.s1 /CLONE=IMAGE:265397 /UG=Hs.188006 KIAA0878 protein /FL=gb:AB020685.1 gb:NM_014899.1 </td> <td> N21138 </td> <td> Rho-related BTB domain containing 3 </td> <td> RHOBTB3 </td> <td> 22836 </td> <td> NM_014899 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017137 // Rab GTPase binding // inferred from physical interaction </td> <td> 125.25 </td> <td> 161.75 </td> <td> 7.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 217955_at </td> <td> 217955_at </td> <td> NM_015367 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015367.1 /DEF=Homo sapiens MIL1 protein (MIL1), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=MIL1 /PROD=MIL1 protein /DB_XREF=gi:7662505 /UG=Hs.10267 MIL1 protein /FL=gb:AF325209.1 gb:AF146568.1 gb:NM_015367.1 </td> <td> NM_015367 </td> <td> BCL2-like 13 (apoptosis facilitator) </td> <td> BCL2L13 </td> <td> 23786 </td> <td> NM_001270726 /// NM_001270727 /// NM_001270728 /// NM_001270729 /// NM_001270730 /// NM_001270731 /// NM_001270732 /// NM_001270733 /// NM_001270734 /// NM_001270735 /// NM_015367 /// NR_073068 /// NR_073069 /// XM_006724075 /// XM_006724076 /// XR_430391 </td> <td> 0006915 // apoptotic process // non-traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td> 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // non-traceable author statement </td> <td> -79.50 </td> <td> 179.93 </td> <td> -7.51 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 35617_at </td> <td> 35617_at </td> <td> U29725 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. U29725:Human BMK1 alpha kinase mRNA, complete cds /cds=(221,2671) /gb=U29725 /gi=973306 /ug=Hs.3080 /len=2980 </td> <td> U29725 </td> <td> mitogen-activated protein kinase 7 </td> <td> MAPK7 </td> <td> 5598 </td> <td> NM_002749 /// NM_139032 /// NM_139033 /// NM_139034 /// XM_005256719 /// XM_006721557 /// XM_006721558 /// XM_006721559 /// XM_006721560 </td> <td> 0000165 // MAPK cascade // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0019933 // cAMP-mediated signaling // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030821 // negative regulation of cAMP catabolic process // non-traceable author statement /// 0034115 // negative regulation of heterotypic cell-cell adhesion // inferred from genetic interaction /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0036003 // positive regulation of transcription from RNA polymerase II promoter in response to stress // inferred from mutant phenotype /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050728 // negative regulation of inflammatory response // traceable author statement /// 0051247 // positive regulation of protein metabolic process // inferred from genetic interaction /// 0051344 // negative regulation of cyclic-nucleotide phosphodiesterase activity // non-traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051534 // negative regulation of NFAT protein import into nucleus // inferred from electronic annotation /// 0060761 // negative regulation of response to cytokine stimulus // inferred from genetic interaction /// 0070301 // cellular response to hydrogen peroxide // inferred from mutant phenotype /// 0071363 // cellular response to growth factor stimulus // inferred from genetic interaction /// 0071499 // cellular response to laminar fluid shear stress // inferred from mutant phenotype /// 0071499 // cellular response to laminar fluid shear stress // traceable author statement /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from direct assay /// 1902176 // negative regulation of intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from mutant phenotype /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from mutant phenotype /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from genetic interaction </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016605 // PML body // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0051019 // mitogen-activated protein kinase binding // inferred from physical interaction </td> <td> -82.25 </td> <td> 122.83 </td> <td> -7.49 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209945_s_at </td> <td> 209945_s_at </td> <td> BC000251 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000251.1 /DEF=Homo sapiens, Similar to glycogen synthase kinase 3 beta, clone MGC:1736, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to glycogen synthase kinase 3 beta /DB_XREF=gi:12652980 /UG=Hs.78802 glycogen synthase kinase 3 beta /FL=gb:BC000251.1 </td> <td> BC000251 </td> <td> glycogen synthase kinase 3 beta </td> <td> GSK3B </td> <td> 2932 </td> <td> NM_001146156 /// NM_002093 /// XM_006713610 /// XM_006713611 </td> <td> 0000320 // re-entry into mitotic cell cycle // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from mutant phenotype /// 0001954 // positive regulation of cell-matrix adhesion // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from direct assay /// 0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006983 // ER overload response // inferred from direct assay /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007520 // myoblast fusion // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0010614 // negative regulation of cardiac muscle hypertrophy // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0021766 // hippocampus development // inferred from mutant phenotype /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031333 // negative regulation of protein complex assembly // inferred from mutant phenotype /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from sequence or structural similarity /// 0032855 // positive regulation of Rac GTPase activity // inferred from mutant phenotype /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0035372 // protein localization to microtubule // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0036016 // cellular response to interleukin-3 // inferred from sequence or structural similarity /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0044027 // hypermethylation of CpG island // inferred from electronic annotation /// 0044337 // canonical Wnt signaling pathway involved in positive regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045719 // negative regulation of glycogen biosynthetic process // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred by curator /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046827 // positive regulation of protein export from nucleus // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048168 // regulation of neuronal synaptic plasticity // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0050774 // negative regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051534 // negative regulation of NFAT protein import into nucleus // inferred from mutant phenotype /// 0060070 // canonical Wnt signaling pathway // inferred by curator /// 0060070 // canonical Wnt signaling pathway // inferred from direct assay /// 0071109 // superior temporal gyrus development // inferred from mutant phenotype /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // traceable author statement /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from sequence or structural similarity /// 1901030 // positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway // inferred from sequence or structural similarity /// 2000077 // negative regulation of type B pancreatic cell development // traceable author statement /// 2000466 // negative regulation of glycogen (starch) synthase activity // traceable author statement /// 2000738 // positive regulation of stem cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030877 // beta-catenin destruction complex // inferred from direct assay /// 0030877 // beta-catenin destruction complex // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0043227 // membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0002039 // p53 binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from direct assay /// 0016301 // kinase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0034236 // protein kinase A catalytic subunit binding // inferred from physical interaction /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0048156 // tau protein binding // inferred from electronic annotation /// 0050321 // tau-protein kinase activity // inferred from direct assay /// 0051059 // NF-kappaB binding // inferred from physical interaction </td> <td> -66.95 </td> <td> 143.25 </td> <td> -7.49 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204602_at </td> <td> 204602_at </td> <td> NM_012242 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012242.1 /DEF=Homo sapiens dickkopf (Xenopus laevis) homolog 1 (DKK1), mRNA. /FEA=mRNA /GEN=DKK1 /PROD=dickkopf (Xenopus laevis) homolog 1 /DB_XREF=gi:7110718 /UG=Hs.40499 dickkopf (Xenopus laevis) homolog 1 /FL=gb:AF127563.1 gb:AF177394.1 gb:NM_012242.1 </td> <td> NM_012242 </td> <td> dickkopf WNT signaling pathway inhibitor 1 </td> <td> DKK1 </td> <td> 22943 </td> <td> NM_012242 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000904 // cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0001706 // endoderm formation // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0002090 // regulation of receptor internalization // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030111 // regulation of Wnt signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from direct assay /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0031333 // negative regulation of protein complex assembly // inferred from direct assay /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0042662 // negative regulation of mesodermal cell fate specification // inferred from direct assay /// 0042663 // regulation of endodermal cell fate specification // inferred from direct assay /// 0048642 // negative regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0060323 // head morphogenesis // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060394 // negative regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0090082 // positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from genetic interaction /// 0090244 // Wnt signaling pathway involved in somitogenesis // inferred from electronic annotation /// 1900116 // extracellular negative regulation of signal transduction // inferred from direct assay /// 1901296 // negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment // inferred from direct assay /// 2000726 // negative regulation of cardiac muscle cell differentiation // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // traceable author statement /// 0048019 // receptor antagonist activity // inferred from direct assay /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay </td> <td> 408.73 </td> <td> 617.11 </td> <td> 7.49 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200623_s_at </td> <td> 200623_s_at </td> <td> NM_005184 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005184.1 /DEF=Homo sapiens calmodulin 3 (phosphorylase kinase, delta) (CALM3), mRNA.  /FEA=mRNA /GEN=CALM3 /PROD=calmodulin 3 (phosphorylase kinase, delta) /DB_XREF=gi:4885108 /UG=Hs.141011 calmodulin 3 (phosphorylase kinase, delta) /FL=gb:BC005137.1 gb:J04046.1 gb:NM_005184.1 </td> <td> NM_005184 </td> <td> calmodulin 1 (phosphorylase kinase, delta) /// calmodulin 2 (phosphorylase kinase, delta) /// calmodulin 3 (phosphorylase kinase, delta) </td> <td> CALM1 /// CALM2 /// CALM3 </td> <td> 801 /// 805 /// 808 </td> <td> NM_001166106 /// NM_001743 /// NM_005184 /// NM_006888 /// XM_006720258 </td> <td> 0001975 // response to amphetamine // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0005513 // detection of calcium ion // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007190 // activation of adenylate cyclase activity // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // inferred from direct assay /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred by curator /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030801 // positive regulation of cyclic nucleotide metabolic process // inferred from direct assay /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0051343 // positive regulation of cyclic-nucleotide phosphodiesterase activity // inferred from direct assay /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay /// 0055117 // regulation of cardiac muscle contraction // inferred from mutant phenotype /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from electronic annotation /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060316 // positive regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0061024 // membrane organization // traceable author statement /// 1901841 // regulation of high voltage-gated calcium channel activity // inferred from electronic annotation /// 1901844 // regulation of cell communication by electrical coupling involved in cardiac conduction // inferred by curator </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0030017 // sarcomere // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008179 // adenylate cyclase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0030235 // nitric-oxide synthase regulator activity // inferred from electronic annotation /// 0031432 // titin binding // inferred from physical interaction /// 0031800 // type 3 metabotropic glutamate receptor binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction /// 0031997 // N-terminal myristoylation domain binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation /// 0050998 // nitric-oxide synthase binding // inferred from electronic annotation /// 0072542 // protein phosphatase activator activity // inferred from direct assay </td> <td> 137.70 </td> <td> 373.68 </td> <td> 7.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 219007_at </td> <td> 219007_at </td> <td> NM_024647 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024647.1 /DEF=Homo sapiens hypothetical protein FLJ13287 (FLJ13287), mRNA. /FEA=mRNA /GEN=FLJ13287 /PROD=hypothetical protein FLJ13287 /DB_XREF=gi:13375888 /UG=Hs.53263 hypothetical protein FLJ13287 /FL=gb:NM_024647.1 </td> <td> NM_024647 </td> <td> nucleoporin 43kDa </td> <td> NUP43 </td> <td> 348995 </td> <td> NM_024647 /// NM_198887 /// NR_104456 /// XM_005266960 /// XM_005266961 /// XM_005266962 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031080 // nuclear pore outer ring // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 96.42 </td> <td> 84.34 </td> <td> 7.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 211984_at </td> <td> 211984_at </td> <td> AI653730 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI653730 /FEA=EST /DB_XREF=gi:4737709 /DB_XREF=est:wb36f12.x1 /CLONE=IMAGE:2307791 /UG=Hs.279009 matrix Gla protein </td> <td> AI653730 </td> <td> calmodulin 1 (phosphorylase kinase, delta) /// calmodulin 2 (phosphorylase kinase, delta) /// calmodulin 3 (phosphorylase kinase, delta) </td> <td> CALM1 /// CALM2 /// CALM3 </td> <td> 801 /// 805 /// 808 </td> <td> NM_001166106 /// NM_001743 /// NM_005184 /// NM_006888 /// XM_006720258 </td> <td> 0001975 // response to amphetamine // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0005513 // detection of calcium ion // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007190 // activation of adenylate cyclase activity // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // inferred from direct assay /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred by curator /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030801 // positive regulation of cyclic nucleotide metabolic process // inferred from direct assay /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0051343 // positive regulation of cyclic-nucleotide phosphodiesterase activity // inferred from direct assay /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay /// 0055117 // regulation of cardiac muscle contraction // inferred from mutant phenotype /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from electronic annotation /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060316 // positive regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0061024 // membrane organization // traceable author statement /// 1901841 // regulation of high voltage-gated calcium channel activity // inferred from electronic annotation /// 1901844 // regulation of cell communication by electrical coupling involved in cardiac conduction // inferred by curator </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0030017 // sarcomere // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008179 // adenylate cyclase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0030235 // nitric-oxide synthase regulator activity // inferred from electronic annotation /// 0031432 // titin binding // inferred from physical interaction /// 0031800 // type 3 metabotropic glutamate receptor binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction /// 0031997 // N-terminal myristoylation domain binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation /// 0050998 // nitric-oxide synthase binding // inferred from electronic annotation /// 0072542 // protein phosphatase activator activity // inferred from direct assay </td> <td> 220.95 </td> <td> 504.40 </td> <td> 7.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200759_x_at </td> <td> 200759_x_at </td> <td> NM_003204 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003204.1 /DEF=Homo sapiens nuclear factor (erythroid-derived 2)-like 1 (NFE2L1), mRNA.  /FEA=mRNA /GEN=NFE2L1 /PROD=transcription factor 11 (basic leucine zippertype) /DB_XREF=gi:4505378 /UG=Hs.83469 nuclear factor (erythroid-derived 2)-like 1 /FL=gb:NM_003204.1 gb:U08853.1 </td> <td> NM_003204 </td> <td> nuclear factor, erythroid 2-like 1 </td> <td> NFE2L1 </td> <td> 4779 </td> <td> NM_003204 /// XM_005257410 /// XM_005257411 /// XM_005257412 /// XM_005257413 /// XM_005257415 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006783 // heme biosynthetic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -580.90 </td> <td> 875.33 </td> <td> -7.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202531_at </td> <td> 202531_at </td> <td> NM_002198 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002198.1 /DEF=Homo sapiens interferon regulatory factor 1 (IRF1), mRNA. /FEA=mRNA /GEN=IRF1 /PROD=interferon regulatory factor 1 /DB_XREF=gi:4504720 /UG=Hs.80645 interferon regulatory factor 1 /FL=gb:NM_002198.1 </td> <td> NM_002198 </td> <td> interferon regulatory factor 1 </td> <td> IRF1 </td> <td> 3659 </td> <td> NM_002198 /// XR_427711 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0002819 // regulation of adaptive immune response // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007596 // blood coagulation // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0032481 // positive regulation of type I interferon production // inferred from sequence or structural similarity /// 0032728 // positive regulation of interferon-beta production // inferred from mutant phenotype /// 0034124 // regulation of MyD88-dependent toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0035458 // cellular response to interferon-beta // inferred from direct assay /// 0043374 // CD8-positive, alpha-beta T cell differentiation // inferred from electronic annotation /// 0045084 // positive regulation of interleukin-12 biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // traceable author statement /// 0045590 // negative regulation of regulatory T cell differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay /// 0051726 // regulation of cell cycle // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 2000564 // regulation of CD8-positive, alpha-beta T cell proliferation // inferred from sequence or structural similarity </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement </td> <td> 0000975 // regulatory region DNA binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -100.53 </td> <td> 117.79 </td> <td> -7.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 214179_s_at </td> <td> 214179_s_at </td> <td> H93013 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:H93013 /FEA=EST /DB_XREF=gi:1099341 /DB_XREF=est:yv07g07.s1 /CLONE=IMAGE:242076 /UG=Hs.83469 nuclear factor (erythroid-derived 2)-like 1 </td> <td> H93013 </td> <td> nuclear factor, erythroid 2-like 1 </td> <td> NFE2L1 </td> <td> 4779 </td> <td> NM_003204 /// XM_005257410 /// XM_005257411 /// XM_005257412 /// XM_005257413 /// XM_005257415 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006783 // heme biosynthetic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -250.30 </td> <td> 381.40 </td> <td> -7.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203460_s_at </td> <td> 203460_s_at </td> <td> NM_007318 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007318.1 /DEF=Homo sapiens presenilin 1 (Alzheimer disease 3) (PSEN1), transcript variant I-463, mRNA.  /FEA=mRNA /GEN=PSEN1 /PROD=presenilin 1 isoform I-463 /DB_XREF=gi:7549812 /UG=Hs.3260 presenilin 1 (Alzheimer disease 3) /FL=gb:U40379.1 gb:L76517.1 gb:NM_007318.1 </td> <td> NM_007318 </td> <td> presenilin 1 </td> <td> PSEN1 </td> <td> 5663 </td> <td> NM_000021 /// NM_007318 /// NM_007319 /// XM_005267864 /// XM_005267866 </td> <td> 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001921 // positive regulation of receptor recycling // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002244 // hematopoietic progenitor cell differentiation // inferred from electronic annotation /// 0002286 // T cell activation involved in immune response // inferred from electronic annotation /// 0002573 // myeloid leukocyte differentiation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006816 // calcium ion transport // not recorded /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007175 // negative regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // not recorded /// 0007220 // Notch receptor processing // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0015813 // L-glutamate transport // inferred from electronic annotation /// 0015871 // choline transport // inferred from electronic annotation /// 0016080 // synaptic vesicle targeting // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from mutant phenotype /// 0016485 // protein processing // inferred from direct assay /// 0021795 // cerebral cortex cell migration // inferred from electronic annotation /// 0021870 // Cajal-Retzius cell differentiation // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0032469 // endoplasmic reticulum calcium ion homeostasis // inferred from direct assay /// 0032469 // endoplasmic reticulum calcium ion homeostasis // inferred from genetic interaction /// 0034205 // beta-amyloid formation // inferred from electronic annotation /// 0035282 // segmentation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0040011 // locomotion // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from direct assay /// 0042640 // anagen // inferred from electronic annotation /// 0042987 // amyloid precursor protein catabolic process // not recorded /// 0042987 // amyloid precursor protein catabolic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043589 // skin morphogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048854 // brain morphogenesis // inferred from electronic annotation /// 0050435 // beta-amyloid metabolic process // not recorded /// 0050673 // epithelial cell proliferation // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from electronic annotation /// 0050820 // positive regulation of coagulation // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051444 // negative regulation of ubiquitin-protein transferase activity // inferred from electronic annotation /// 0051563 // smooth endoplasmic reticulum calcium ion homeostasis // not recorded /// 0051604 // protein maturation // inferred from electronic annotation /// 0051966 // regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway //  /// 0060075 // regulation of resting membrane potential // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from mutant phenotype /// 2000059 // negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // not recorded /// 0005765 // lysosomal membrane // not recorded /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005790 // smooth endoplasmic reticulum // inferred from direct assay /// 0005791 // rough endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005938 // cell cortex // not recorded /// 0009986 // cell surface // not recorded /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // traceable author statement /// 0016324 // apical plasma membrane // not recorded /// 0030018 // Z disc // not recorded /// 0030424 // axon // not recorded /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // not recorded /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031594 // neuromuscular junction // not recorded /// 0031965 // nuclear membrane // inferred from direct assay /// 0035253 // ciliary rootlet // not recorded /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // not recorded /// 0043198 // dendritic shaft // not recorded /// 0043227 // membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // not recorded /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // not recorded /// 0070765 // gamma-secretase complex // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from direct assay /// 0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0045296 // cadherin binding // not recorded </td> <td> -129.90 </td> <td> 215.05 </td> <td> -7.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218361_at </td> <td> 218361_at </td> <td> NM_018178 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018178.1 /DEF=Homo sapiens hypothetical protein FLJ10687 (FLJ10687), mRNA. /FEA=mRNA /GEN=FLJ10687 /PROD=hypothetical protein FLJ10687 /DB_XREF=gi:8922588 /UG=Hs.29379 hypothetical protein FLJ10687 /FL=gb:NM_018178.1 </td> <td> NM_018178 </td> <td> golgi phosphoprotein 3-like </td> <td> GOLPH3L </td> <td> 55204 </td> <td> NM_018178 /// XM_006711428 </td> <td> 0007030 // Golgi organization // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred by curator /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred by curator </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0070273 // phosphatidylinositol-4-phosphate binding // inferred from direct assay </td> <td> -235.20 </td> <td> 275.80 </td> <td> -7.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 221539_at </td> <td> 221539_at </td> <td> AB044548 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB044548.1 /DEF=Homo sapiens POKcl.6 mRNA for eukaryotic translation initiation factor 4E binding protein 1, complete cds.  /FEA=mRNA /GEN=POKcl.6 /PROD=eukaryotic translation initiation factor 4Ebinding protein 1 /DB_XREF=gi:11527778 /UG=Hs.71819 eukaryotic translation initiation factor 4E binding protein 1 /FL=gb:AB044548.1 gb:BC004459.1 gb:NM_004095.1 gb:L36055.1 </td> <td> AB044548 </td> <td> eukaryotic translation initiation factor 4E binding protein 1 </td> <td> EIF4EBP1 </td> <td> 1978 </td> <td> NM_004095 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0002931 // response to ischemia // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0031333 // negative regulation of protein complex assembly // inferred from electronic annotation /// 0031929 // TOR signaling // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0045947 // negative regulation of translational initiation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008190 // eukaryotic initiation factor 4E binding // inferred from electronic annotation /// 0030371 // translation repressor activity // inferred from direct assay /// 0031369 // translation initiation factor binding // inferred from electronic annotation </td> <td> -216.00 </td> <td> 325.80 </td> <td> -7.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204488_at </td> <td> 204488_at </td> <td> NM_014908 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014908.1 /DEF=Homo sapiens KIAA1094 protein (KIAA1094), mRNA. /FEA=mRNA /GEN=KIAA1094 /PROD=KIAA1094 protein /DB_XREF=gi:7662481 /UG=Hs.161166 KIAA1094 protein /FL=gb:AB029017.1 gb:NM_014908.1 </td> <td> NM_014908 </td> <td> dolichol kinase </td> <td> DOLK </td> <td> 22845 </td> <td> NM_014908 </td> <td> 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006489 // dolichyl diphosphate biosynthetic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043048 // dolichyl monophosphate biosynthetic process // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay </td> <td> 0004168 // dolichol kinase activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 56.18 </td> <td> 80.04 </td> <td> 7.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203102_s_at </td> <td> 203102_s_at </td> <td> NM_002408 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002408.2 /DEF=Homo sapiens mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT2), mRNA.  /FEA=mRNA /GEN=MGAT2 /PROD=alpha-1,6-mannosyl-glycoproteinbeta-1,2-N-acetylglucosaminyltransferase /DB_XREF=gi:6031183 /UG=Hs.172195 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase /FL=gb:NM_002408.2 </td> <td> NM_002408 </td> <td> mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase </td> <td> MGAT2 </td> <td> 4247 </td> <td> NM_001015883 /// NM_002408 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // traceable author statement /// 0009311 // oligosaccharide metabolic process // traceable author statement /// 0009312 // oligosaccharide biosynthetic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0008455 // alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> 152.77 </td> <td> 284.76 </td> <td> 7.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 215947_s_at </td> <td> 215947_s_at </td> <td> AF090094 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF090094.1 /DEF=Homo sapiens clone IMAGE 172979. /FEA=mRNA /DB_XREF=gi:4063629 /UG=Hs.125078 ornithine decarboxylase antizyme 1 </td> <td> AF090094 </td> <td> family with sequence similarity 136, member A /// protein FAM136A-like </td> <td> FAM136A /// LOC100287852 </td> <td> 84908 /// 100287852 </td> <td> NM_032822 /// XM_002342390 /// XM_003119906 /// XM_003960331 /// XM_005264620 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation </td> <td>  </td> <td> 86.77 </td> <td> 138.41 </td> <td> 7.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200593_s_at </td> <td> 200593_s_at </td> <td> BC003621 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003621.1 /DEF=Homo sapiens, heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A), clone MGC:1992, mRNA, complete cds.  /FEA=mRNA /PROD=heterogeneous nuclear ribonucleoprotein U(scaffold attachment factor A) /DB_XREF=gi:13177672 /UG=Hs.103804 heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) /FL=gb:BC003367.1 gb:BC003621.1 gb:NM_004501.1 </td> <td> BC003621 </td> <td> heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) </td> <td> HNRNPU </td> <td> 3192 </td> <td> NM_004501 /// NM_031844 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 133.93 </td> <td> 360.46 </td> <td> 7.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203818_s_at </td> <td> 203818_s_at </td> <td> NM_006802 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006802.1 /DEF=Homo sapiens splicing factor 3a, subunit 3, 60kD (SF3A3), mRNA. /FEA=mRNA /GEN=SF3A3 /PROD=splicing factor 3a, subunit 3, 60kD /DB_XREF=gi:5803166 /UG=Hs.77897 splicing factor 3a, subunit 3, 60kD /FL=gb:BC002395.1 gb:U08815.1 gb:NM_006802.1 </td> <td> NM_006802 </td> <td> splicing factor 3a, subunit 3, 60kDa </td> <td> SF3A3 </td> <td> 10946 </td> <td> NM_006802 /// XM_005270390 </td> <td> 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000389 // mRNA 3'-splice site recognition // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from mutant phenotype /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 91.45 </td> <td> 129.95 </td> <td> 7.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 221521_s_at </td> <td> 221521_s_at </td> <td> BC003186 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003186.1 /DEF=Homo sapiens, HSPC037 protein, clone MGC:673, mRNA, complete cds. /FEA=mRNA /PROD=HSPC037 protein /DB_XREF=gi:13112024 /UG=Hs.108196 HSPC037 protein /FL=gb:BC003186.1 gb:AF201939.1 </td> <td> BC003186 </td> <td> GINS complex subunit 2 (Psf2 homolog) </td> <td> GINS2 </td> <td> 51659 </td> <td> NM_016095 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 66.18 </td> <td> 47.96 </td> <td> 7.43 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218678_at </td> <td> 218678_at </td> <td> NM_024609 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024609.1 /DEF=Homo sapiens hypothetical protein FLJ21841 (FLJ21841), mRNA. /FEA=mRNA /GEN=FLJ21841 /PROD=hypothetical protein FLJ21841 /DB_XREF=gi:13375818 /UG=Hs.29076 hypothetical protein FLJ21841 /FL=gb:NM_024609.1 </td> <td> NM_024609 </td> <td> nestin </td> <td> NES </td> <td> 10763 </td> <td> NM_006617 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007417 // central nervous system development // non-traceable author statement /// 0007420 // brain development // inferred from sequence or structural similarity /// 0030844 // positive regulation of intermediate filament depolymerization // inferred from sequence or structural similarity /// 0031076 // embryonic camera-type eye development // inferred from sequence or structural similarity /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048858 // cell projection morphogenesis // inferred from electronic annotation /// 0072089 // stem cell proliferation // inferred from mutant phenotype /// 2000179 // positive regulation of neural precursor cell proliferation // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005882 // intermediate filament // non-traceable author statement /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0019215 // intermediate filament binding // inferred from sequence or structural similarity </td> <td> 347.67 </td> <td> 542.09 </td> <td> 7.43 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 206034_at </td> <td> 206034_at </td> <td> NM_002640 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002640.1 /DEF=Homo sapiens serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 8 (SERPINB8), mRNA.  /FEA=mRNA /GEN=SERPINB8 /PROD=serine (or cysteine) proteinase inhibitor, cladeB (ovalbumin), member 8 /DB_XREF=gi:4505790 /UG=Hs.41726 serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 8 /FL=gb:L40377.1 gb:NM_002640.1 </td> <td> NM_002640 </td> <td> serpin peptidase inhibitor, clade B (ovalbumin), member 8 </td> <td> SERPINB8 </td> <td> 5271 </td> <td> NM_001031848 /// NM_001276490 /// NM_002640 /// NM_198833 /// XM_006722484 </td> <td> 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0030162 // regulation of proteolysis // not recorded </td> <td> 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay </td> <td> 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> -116.38 </td> <td> 151.19 </td> <td> -7.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 205446_s_at </td> <td> 205446_s_at </td> <td> NM_001880 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001880.1 /DEF=Homo sapiens activating transcription factor 2 (ATF2), mRNA. /FEA=mRNA /GEN=ATF2 /PROD=activating transcription factor 2 /DB_XREF=gi:4503032 /UG=Hs.198166 activating transcription factor 2 /FL=gb:NM_001880.1 </td> <td> NM_001880 </td> <td> activating transcription factor 2 </td> <td> ATF2 </td> <td> 1386 </td> <td> NM_001256090 /// NM_001256091 /// NM_001256092 /// NM_001256093 /// NM_001256094 /// NM_001880 /// NR_045768 /// NR_045769 /// NR_045770 /// NR_045771 /// NR_045772 /// NR_045773 /// NR_045774 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0006366 // transcription from RNA polymerase II promoter // inferred by curator /// 0006970 // response to osmotic stress // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from mutant phenotype /// 0016573 // histone acetylation // inferred from direct assay /// 0016573 // histone acetylation // inferred from electronic annotation /// 0031573 // intra-S DNA damage checkpoint // inferred from mutant phenotype /// 0032915 // positive regulation of transforming growth factor beta2 production // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060612 // adipose tissue development // inferred from electronic annotation /// 1902110 // positive regulation of mitochondrial membrane permeability involved in apoptotic process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0035861 // site of double-strand break // inferred from direct assay </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from mutant phenotype /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred by curator /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001228 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred by curator /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003713 // transcription coactivator activity // traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008140 // cAMP response element binding protein binding // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -74.02 </td> <td> 106.16 </td> <td> -7.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212602_at </td> <td> 212602_at </td> <td> AI806395 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI806395 /FEA=EST /DB_XREF=gi:5392961 /DB_XREF=est:wf27d05.x1 /CLONE=IMAGE:2356809 /UG=Hs.198135 KIAA0993 protein </td> <td> AI806395 </td> <td> WD repeat and FYVE domain containing 3 </td> <td> WDFY3 </td> <td> 23001 </td> <td> NM_014991 /// NM_178583 /// NM_178585 /// XM_005262858 /// XM_006714151 /// XM_006714152 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016239 // positive regulation of macroautophagy // inferred from mutant phenotype /// 0035973 // aggrephagy // inferred from mutant phenotype </td> <td> 0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from mutant phenotype /// 0016020 // membrane // inferred from electronic annotation /// 0016234 // inclusion body // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0019898 // extrinsic component of membrane // inferred from direct assay /// 0034274 // Atg12-Atg5-Atg16 complex // inferred from direct assay </td> <td> 0003831 // beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005545 // 1-phosphatidylinositol binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -156.78 </td> <td> 209.71 </td> <td> -7.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 210417_s_at </td> <td> 210417_s_at </td> <td> U81802 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U81802.1 /DEF=Human PtdIns 4-kinase (PI4Kb) mRNA, complete cds. /FEA=mRNA /GEN=PI4Kb /PROD=PtdIns 4-kinase /DB_XREF=gi:1894946 /UG=Hs.154846 phosphatidylinositol 4-kinase, catalytic, beta polypeptide /FL=gb:U81802.1 </td> <td> U81802 </td> <td> phosphatidylinositol 4-kinase, catalytic, beta </td> <td> PI4KB </td> <td> 5298 </td> <td> NM_001198773 /// NM_001198774 /// NM_001198775 /// NM_002651 /// XM_005245261 /// XM_005245262 /// XM_005245263 /// XM_005245264 /// XM_005245265 /// XM_006711385 </td> <td> 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030867 // rough endoplasmic reticulum membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004430 // 1-phosphatidylinositol 4-kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation </td> <td> 77.10 </td> <td> 94.30 </td> <td> 7.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212978_at </td> <td> 212978_at </td> <td> AU146004 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU146004 /FEA=EST /DB_XREF=gi:11007525 /DB_XREF=est:AU146004 /CLONE=HEMBA1006523 /UG=Hs.199243 KIAA0231 protein </td> <td> AU146004 </td> <td> leucine rich repeat containing 8 family, member B </td> <td> LRRC8B </td> <td> 23507 </td> <td> NM_001134476 /// NM_015350 /// XM_005270701 /// XM_005270702 /// XM_005270703 /// XM_005270704 /// XM_006710541 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 85.48 </td> <td> 108.61 </td> <td> 7.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212298_at </td> <td> 212298_at </td> <td> BE620457 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE620457 /FEA=EST /DB_XREF=gi:9891395 /DB_XREF=est:601483690F1 /CLONE=IMAGE:3886055 /UG=Hs.69285 neuropilin 1 /FL=gb:AF018956.1 gb:AF016050.1 gb:NM_003873.1 </td> <td> BE620457 </td> <td> neuropilin 1 </td> <td> NRP1 </td> <td> 8829 </td> <td> NM_001024628 /// NM_001024629 /// NM_001244972 /// NM_001244973 /// NM_003873 /// NR_045259 /// XM_006717521 /// XM_006717522 /// XM_006717523 /// XM_006717524 /// XM_006717525 /// XM_006717526 </td> <td> 0001525 // angiogenesis // inferred from mutant phenotype /// 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001569 // patterning of blood vessels // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0001938 // positive regulation of endothelial cell proliferation // traceable author statement /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007413 // axonal fasciculation // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // traceable author statement /// 0014911 // positive regulation of smooth muscle cell migration // traceable author statement /// 0016358 // dendrite development // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021636 // trigeminal nerve morphogenesis // inferred from electronic annotation /// 0021675 // nerve development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0031290 // retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 0035729 // cellular response to hepatocyte growth factor stimulus // inferred from mutant phenotype /// 0035767 // endothelial cell chemotaxis // inferred from mutant phenotype /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from sequence or structural similarity /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0038190 // VEGF-activated neuropilin signaling pathway // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048841 // regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048842 // positive regulation of axon extension involved in axon guidance // inferred from sequence or structural similarity /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048846 // axon extension involved in axon guidance // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0050918 // positive chemotaxis // inferred from sequence or structural similarity /// 0060301 // positive regulation of cytokine activity // traceable author statement /// 0060385 // axonogenesis involved in innervation // inferred from sequence or structural similarity /// 0060627 // regulation of vesicle-mediated transport // traceable author statement /// 0060666 // dichotomous subdivision of terminal units involved in salivary gland branching // inferred from electronic annotation /// 0060978 // angiogenesis involved in coronary vascular morphogenesis // inferred from sequence or structural similarity /// 0061299 // retina vasculature morphogenesis in camera-type eye // inferred from sequence or structural similarity /// 0061549 // sympathetic ganglion development // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0071526 // semaphorin-plexin signaling pathway // non-traceable author statement /// 0071679 // commissural neuron axon guidance // inferred from sequence or structural similarity /// 0090259 // regulation of retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 0097102 // endothelial tip cell fate specification // inferred from sequence or structural similarity /// 0097490 // sympathetic neuron projection extension // inferred from sequence or structural similarity /// 0097491 // sympathetic neuron projection guidance // inferred from sequence or structural similarity /// 1901166 // neural crest cell migration involved in autonomic nervous system development // inferred from sequence or structural similarity /// 1902285 // semaphorin-plexin signaling pathway involved in neuron projection guidance // inferred from sequence or structural similarity /// 1902336 // positive regulation of retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 1902946 // protein localization to early endosome // inferred from sequence or structural similarity /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0002116 // semaphorin receptor complex // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005769 // early endosome // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from direct assay /// 0005883 // neurofilament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043235 // receptor complex // traceable author statement /// 0097443 // sorting endosome // inferred from sequence or structural similarity </td> <td> 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0005021 // vascular endothelial growth factor-activated receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0015026 // coreceptor activity // traceable author statement /// 0017154 // semaphorin receptor activity // non-traceable author statement /// 0019838 // growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // traceable author statement /// 0019955 // cytokine binding // non-traceable author statement /// 0038085 // vascular endothelial growth factor binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 154.98 </td> <td> 568.51 </td> <td> 7.40 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213405_at </td> <td> 213405_at </td> <td> N95443 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N95443 /FEA=EST /DB_XREF=gi:1267753 /DB_XREF=est:zb81c12.s1 /CLONE=IMAGE:310006 /UG=Hs.19180 Homo sapiens mRNA; cDNA DKFZp564E122 (from clone DKFZp564E122) </td> <td> N95443 </td> <td> RAB22A, member RAS oncogene family </td> <td> RAB22A </td> <td> 57403 </td> <td> NM_020673 /// XM_005260469 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007032 // endosome organization // inferred from expression pattern /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045335 // phagocytic vesicle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay </td> <td> 65.52 </td> <td> 72.36 </td> <td> 7.39 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202567_at </td> <td> 202567_at </td> <td> NM_004175 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004175.1 /DEF=Homo sapiens small nuclear ribonucleoprotein D3 polypeptide (18kD) (SNRPD3), mRNA.  /FEA=mRNA /GEN=SNRPD3 /PROD=small nuclear ribonucleoprotein D3 polypeptide(18kD) /DB_XREF=gi:4759159 /UG=Hs.1575 small nuclear ribonucleoprotein D3 polypeptide (18kD) /FL=gb:BC000457.1 gb:BC003150.1 gb:NM_004175.1 gb:U15009.1 </td> <td> NM_004175 </td> <td> small nuclear ribonucleoprotein D3 polypeptide 18kDa </td> <td> SNRPD3 </td> <td> 6634 </td> <td> NM_001278656 /// NM_004175 /// NR_103819 </td> <td> 0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008334 // histone mRNA metabolic process // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005683 // U7 snRNP // inferred from direct assay /// 0005685 // U1 snRNP // inferred from direct assay /// 0005687 // U4 snRNP // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement /// 0034709 // methylosome // inferred from direct assay /// 0034715 // pICln-Sm protein complex // inferred from direct assay /// 0034719 // SMN-Sm protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0071208 // histone pre-mRNA DCP binding // inferred from sequence or structural similarity </td> <td> 172.50 </td> <td> 548.88 </td> <td> 7.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200684_s_at </td> <td> 200684_s_at </td> <td> AI819709 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI819709 /FEA=EST /DB_XREF=gi:5438788 /DB_XREF=est:wj77c07.x1 /CLONE=IMAGE:2408844 /UG=Hs.108104 ubiquitin-conjugating enzyme E2L 3 /FL=gb:NM_003347.1 </td> <td> AI819709 </td> <td> ubiquitin-conjugating enzyme E2L 3 </td> <td> UBE2L3 </td> <td> 7332 </td> <td> NM_001256355 /// NM_001256356 /// NM_003347 /// NM_198157 /// NR_028436 /// NR_046082 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0071383 // cellular response to steroid hormone stimulus // inferred from mutant phenotype /// 0071385 // cellular response to glucocorticoid stimulus // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 95.38 </td> <td> 132.76 </td> <td> 7.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218732_at </td> <td> 218732_at </td> <td> NM_016077 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016077.1 /DEF=Homo sapiens CGI-147 protein (LOC51651), mRNA. /FEA=mRNA /GEN=LOC51651 /PROD=CGI-147 protein /DB_XREF=gi:7706350 /UG=Hs.12677 CGI-147 protein /FL=gb:AF151905.1 gb:NM_016077.1 </td> <td> NM_016077 </td> <td> peptidyl-tRNA hydrolase 2 </td> <td> PTRH2 </td> <td> 51651 </td> <td> NM_001015509 /// NM_016077 /// XM_005257447 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from mutant phenotype /// 2000210 // positive regulation of anoikis // inferred from mutant phenotype /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005829 // cytosol // inferred from mutant phenotype /// 0016020 // membrane // inferred from direct assay </td> <td> 0004045 // aminoacyl-tRNA hydrolase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 98.05 </td> <td> 162.33 </td> <td> 7.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201288_at </td> <td> 201288_at </td> <td> NM_001175 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001175.1 /DEF=Homo sapiens Rho GDP dissociation inhibitor (GDI) beta (ARHGDIB), mRNA.  /FEA=mRNA /GEN=ARHGDIB /PROD=Rho GDP dissociation inhibitor (GDI) beta /DB_XREF=gi:10835001 /UG=Hs.83656 Rho GDP dissociation inhibitor (GDI) beta /FL=gb:NM_001175.1 gb:L20688.1 </td> <td> NM_001175 </td> <td> Rho GDP dissociation inhibitor (GDI) beta </td> <td> ARHGDIB </td> <td> 397 </td> <td> NM_001175 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005094 // Rho GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation </td> <td> 306.32 </td> <td> 1063.66 </td> <td> 7.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202130_at </td> <td> 202130_at </td> <td> AA725102 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA725102 /FEA=EST /DB_XREF=gi:2742809 /DB_XREF=est:ai08h05.s1 /CLONE=1342233 /UG=Hs.209061 sudD (suppressor of bimD6, Aspergillus nidulans) homolog /FL=gb:AF013591.1 gb:NM_003831.1 </td> <td> AA725102 </td> <td> RIO kinase 3 </td> <td> RIOK3 </td> <td> 8780 </td> <td> NM_003831 /// NM_145906 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007059 // chromosome segregation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation </td> <td> -333.33 </td> <td> 457.76 </td> <td> -7.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209033_s_at </td> <td> 209033_s_at </td> <td> D86550 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D86550.1 /DEF=Human mRNA for serinethreonine protein kinase, complete cds. /FEA=mRNA /GEN=hMNB /PROD=serinethreonine protein kinase /DB_XREF=gi:1772437 /UG=Hs.75842 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A /FL=gb:D85759.1 gb:D86550.1 </td> <td> D86550 </td> <td> dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A </td> <td> DYRK1A </td> <td> 1859 </td> <td> NM_001396 /// NM_101395 /// NM_130436 /// NM_130437 /// NM_130438 /// XM_005260931 /// XM_005260933 /// XM_006723976 /// XM_006723977 /// XM_006723978 /// XM_006723979 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0007399 // nervous system development // traceable author statement /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from sequence or structural similarity /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0090312 // positive regulation of protein deacetylation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from sequence or structural similarity /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from sequence or structural similarity /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0043621 // protein self-association // inferred from sequence or structural similarity /// 0048156 // tau protein binding // inferred from sequence or structural similarity </td> <td> -114.78 </td> <td> 332.36 </td> <td> -7.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203947_at </td> <td> 203947_at </td> <td> NM_001326 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001326.1 /DEF=Homo sapiens cleavage stimulation factor, 3 pre-RNA, subunit 3, 77kD (CSTF3), mRNA.  /FEA=mRNA /GEN=CSTF3 /PROD=cleavage stimulation factor subunit 3 /DB_XREF=gi:4557494 /UG=Hs.180034 cleavage stimulation factor, 3 pre-RNA, subunit 3, 77kD /FL=gb:NM_001326.1 gb:U15782.1 </td> <td> NM_001326 </td> <td> cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa </td> <td> CSTF3 </td> <td> 1479 </td> <td> NM_001033505 /// NM_001033506 /// NM_001326 /// XM_006718154 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // traceable author statement /// 0006379 // mRNA cleavage // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -178.03 </td> <td> 449.11 </td> <td> -7.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201204_s_at </td> <td> 201204_s_at </td> <td> AA706065 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA706065 /FEA=EST /DB_XREF=gi:2715983 /DB_XREF=est:zf44f12.s1 /CLONE=IMAGE:379823 /UG=Hs.98614 ribosome binding protein 1 (dog 180kD homolog) /FL=gb:AF006751.1 gb:NM_004587.1 </td> <td> AA706065 </td> <td> ribosome binding protein 1 </td> <td> RRBP1 </td> <td> 6238 </td> <td> NM_001042576 /// NM_004587 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006412 // translation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005840 // ribosome // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 236.23 </td> <td> 373.06 </td> <td> 7.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 211711_s_at </td> <td> 211711_s_at </td> <td> BC005821 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005821.1 /DEF=Homo sapiens, phosphatase and tensin homolog (mutated in multiple advanced cancers 1), clone MGC:11227, mRNA, complete cds.  /FEA=mRNA /PROD=phosphatase and tensin homolog (mutated inmultiple advanced cancers 1) /DB_XREF=gi:13543309 /FL=gb:BC005821.1 </td> <td> BC005821 </td> <td> phosphatase and tensin homolog </td> <td> PTEN </td> <td> 5728 </td> <td> NM_000314 /// XM_006717926 /// XM_006717927 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0002902 // regulation of B cell apoptotic process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006915 // apoptotic process // inferred from sequence or structural similarity /// 0007092 // activation of mitotic anaphase-promoting complex activity // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007270 // neuron-neuron synaptic transmission // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0007613 // memory // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009749 // response to glucose // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0014067 // negative regulation of phosphatidylinositol 3-kinase signaling // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from sequence or structural similarity /// 0021542 // dentate gyrus development // inferred from sequence or structural similarity /// 0021955 // central nervous system neuron axonogenesis // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031642 // negative regulation of myelination // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0031658 // negative regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle // inferred from direct assay /// 0032286 // central nervous system myelin maintenance // inferred from sequence or structural similarity /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032535 // regulation of cellular component size // inferred from sequence or structural similarity /// 0033032 // regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033198 // response to ATP // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from sequence or structural similarity /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042711 // maternal behavior // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043491 // protein kinase B signaling // inferred from sequence or structural similarity /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045475 // locomotor rhythm // inferred from sequence or structural similarity /// 0045792 // negative regulation of cell size // inferred from sequence or structural similarity /// 0046621 // negative regulation of organ growth // inferred from sequence or structural similarity /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from direct assay /// 0046856 // phosphatidylinositol dephosphorylation // inferred from direct assay /// 0046856 // phosphatidylinositol dephosphorylation // inferred from mutant phenotype /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048738 // cardiac muscle tissue development // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0048854 // brain morphogenesis // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050765 // negative regulation of phagocytosis // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051895 // negative regulation of focal adhesion assembly // inferred from mutant phenotype /// 0051898 // negative regulation of protein kinase B signaling // inferred from mutant phenotype /// 0060024 // rhythmic synaptic transmission // inferred from sequence or structural similarity /// 0060070 // canonical Wnt signaling pathway // inferred from direct assay /// 0060074 // synapse maturation // inferred from sequence or structural similarity /// 0060134 // prepulse inhibition // inferred from sequence or structural similarity /// 0060179 // male mating behavior // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0060292 // long term synaptic depression // inferred from electronic annotation /// 0060736 // prostate gland growth // inferred from electronic annotation /// 0060997 // dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061002 // negative regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0090071 // negative regulation of ribosome biogenesis // inferred from electronic annotation /// 0090344 // negative regulation of cell aging // inferred from electronic annotation /// 0090394 // negative regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 0097105 // presynaptic membrane assembly // inferred from sequence or structural similarity /// 0097107 // postsynaptic density assembly // inferred from sequence or structural similarity /// 2000060 // positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 2000808 // negative regulation of synaptic vesicle clustering // inferred from sequence or structural similarity /// 2001235 // positive regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0009898 // cytoplasmic side of plasma membrane // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0035749 // myelin sheath adaxonal region // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from direct assay /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from sequence or structural similarity /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004438 // phosphatidylinositol-3-phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0005161 // platelet-derived growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0010997 // anaphase-promoting complex binding // inferred from physical interaction /// 0016314 // phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity // inferred from direct assay /// 0016314 // phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0051717 // inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity // inferred from direct assay /// 0051717 // inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity // traceable author statement /// 0051800 // phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity // inferred from direct assay /// 0051800 // phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity // traceable author statement </td> <td> -84.33 </td> <td> 93.89 </td> <td> -7.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201906_s_at </td> <td> 201906_s_at </td> <td> NM_005808 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005808.1 /DEF=Homo sapiens HYA22 protein (HYA22), mRNA. /FEA=mRNA /GEN=HYA22 /PROD=HYA22 protein /DB_XREF=gi:5031774 /UG=Hs.147189 HYA22 protein /FL=gb:D88153.1 gb:NM_005808.1 </td> <td> NM_005808 </td> <td> CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like </td> <td> CTDSPL </td> <td> 10217 </td> <td> NM_001008392 /// NM_005808 /// XM_006712922 /// XM_006712923 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 72.98 </td> <td> 76.26 </td> <td> 7.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201700_at </td> <td> 201700_at </td> <td> NM_001760 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001760.1 /DEF=Homo sapiens cyclin D3 (CCND3), mRNA. /FEA=mRNA /GEN=CCND3 /PROD=cyclin D3 /DB_XREF=gi:4502618 /UG=Hs.83173 cyclin D3 /FL=gb:M90814.1 gb:M92287.1 gb:NM_001760.1 </td> <td> NM_001760 </td> <td> cyclin D3 </td> <td> CCND3 </td> <td> 896 </td> <td> NM_001136017 /// NM_001136125 /// NM_001136126 /// NM_001287427 /// NM_001287434 /// NM_001760 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0045737 // positive regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> 138.20 </td> <td> 236.65 </td> <td> 7.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201313_at </td> <td> 201313_at </td> <td> NM_001975 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001975.1 /DEF=Homo sapiens enolase 2, (gamma, neuronal) (ENO2), mRNA. /FEA=mRNA /GEN=ENO2 /PROD=enolase 2, (gamma, neuronal) /DB_XREF=gi:5803010 /UG=Hs.146580 enolase 2, (gamma, neuronal) /FL=gb:BC002745.1 gb:NM_001975.1 gb:M22349.1 </td> <td> NM_001975 </td> <td> enolase 2 (gamma, neuronal) </td> <td> ENO2 </td> <td> 2026 </td> <td> NM_001975 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000015 // phosphopyruvate hydratase complex // inferred from electronic annotation /// 0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004634 // phosphopyruvate hydratase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -78.10 </td> <td> 56.77 </td> <td> -7.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200788_s_at </td> <td> 200788_s_at </td> <td> NM_003768 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003768.1 /DEF=Homo sapiens phosphoprotein enriched in astrocytes 15 (PEA15), mRNA.  /FEA=mRNA /GEN=PEA15 /PROD=phosphoprotein enriched in astrocytes 15 /DB_XREF=gi:4505704 /UG=Hs.194673 phosphoprotein enriched in astrocytes 15 /FL=gb:BC002426.1 gb:NM_003768.1 </td> <td> NM_003768 </td> <td> phosphoprotein enriched in astrocytes 15 </td> <td> PEA15 </td> <td> 8682 </td> <td> NM_003768 /// XM_005245564 /// XM_006711598 /// XM_006711599 </td> <td> 0006810 // transport // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0046325 // negative regulation of glucose import // inferred from direct assay /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 1902043 // positive regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005875 // microtubule associated complex // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 176.25 </td> <td> 888.05 </td> <td> 7.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200924_s_at </td> <td> 200924_s_at </td> <td> NM_002394 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002394.1 /DEF=Homo sapiens solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 (SLC3A2), mRNA.  /FEA=mRNA /GEN=SLC3A2 /PROD=antigen identified by monoclonal antibodies 4F2,TRA1.10, TROP4, and T43 /DB_XREF=gi:4505140 /UG=Hs.79748 solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 /FL=gb:BC001061.1 gb:J02769.1 gb:J03569.1 gb:NM_002394.1 gb:AB018010.1 </td> <td> NM_002394 </td> <td> solute carrier family 3 (amino acid transporter heavy chain), member 2 </td> <td> SLC3A2 </td> <td> 6520 </td> <td> NM_001012661 /// NM_001012662 /// NM_001012663 /// NM_001012664 /// NM_001013251 /// NM_002394 /// NR_037193 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006816 // calcium ion transport // non-traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015804 // neutral amino acid transport // inferred from electronic annotation /// 0015827 // tryptophan transport // inferred from sequence or structural similarity /// 0016049 // cell growth // non-traceable author statement /// 0035725 // sodium ion transmembrane transport // traceable author statement /// 0043330 // response to exogenous dsRNA // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060356 // leucine import // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005432 // calcium:sodium antiporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0043169 // cation binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -192.98 </td> <td> 294.24 </td> <td> -7.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 222199_s_at </td> <td> 222199_s_at </td> <td> AK001289 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001289.1 /DEF=Homo sapiens cDNA FLJ10427 fis, clone NT2RP1000348, weakly similar to REDUCED VIABILITY UPON STARVATION PROTEIN 161.  /FEA=mRNA /DB_XREF=gi:7022450 /UG=Hs.68090 bridging integrator-3 </td> <td> AK001289 </td> <td> bridging integrator 3 </td> <td> BIN3 </td> <td> 55909 </td> <td> NM_018688 /// XM_005273573 </td> <td> 0000910 // cytokinesis // non-traceable author statement /// 0000917 // barrier septum assembly // inferred from electronic annotation /// 0007015 // actin filament organization // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0008104 // protein localization // inferred from mutant phenotype /// 0009826 // unidimensional cell growth // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008093 // cytoskeletal adaptor activity // non-traceable author statement </td> <td> 66.33 </td> <td> 65.26 </td> <td> 7.31 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 207782_s_at </td> <td> 207782_s_at </td> <td> NM_007319 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007319.1 /DEF=Homo sapiens presenilin 1 (Alzheimer disease 3) (PSEN1), transcript variant I-374., mRNA.  /FEA=mRNA /GEN=PSEN1 /PROD=presenilin 1 isoform I-374 /DB_XREF=gi:7549814 /UG=Hs.3260 presenilin 1 (Alzheimer disease 3) /FL=gb:U40380.1 gb:NM_007319.1 </td> <td> NM_007319 </td> <td> presenilin 1 </td> <td> PSEN1 </td> <td> 5663 </td> <td> NM_000021 /// NM_007318 /// NM_007319 /// XM_005267864 /// XM_005267866 </td> <td> 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001921 // positive regulation of receptor recycling // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002244 // hematopoietic progenitor cell differentiation // inferred from electronic annotation /// 0002286 // T cell activation involved in immune response // inferred from electronic annotation /// 0002573 // myeloid leukocyte differentiation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006816 // calcium ion transport // not recorded /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007175 // negative regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // not recorded /// 0007220 // Notch receptor processing // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0015813 // L-glutamate transport // inferred from electronic annotation /// 0015871 // choline transport // inferred from electronic annotation /// 0016080 // synaptic vesicle targeting // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from mutant phenotype /// 0016485 // protein processing // inferred from direct assay /// 0021795 // cerebral cortex cell migration // inferred from electronic annotation /// 0021870 // Cajal-Retzius cell differentiation // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0032469 // endoplasmic reticulum calcium ion homeostasis // inferred from direct assay /// 0032469 // endoplasmic reticulum calcium ion homeostasis // inferred from genetic interaction /// 0034205 // beta-amyloid formation // inferred from electronic annotation /// 0035282 // segmentation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0040011 // locomotion // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from direct assay /// 0042640 // anagen // inferred from electronic annotation /// 0042987 // amyloid precursor protein catabolic process // not recorded /// 0042987 // amyloid precursor protein catabolic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043589 // skin morphogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048854 // brain morphogenesis // inferred from electronic annotation /// 0050435 // beta-amyloid metabolic process // not recorded /// 0050673 // epithelial cell proliferation // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from electronic annotation /// 0050820 // positive regulation of coagulation // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051444 // negative regulation of ubiquitin-protein transferase activity // inferred from electronic annotation /// 0051563 // smooth endoplasmic reticulum calcium ion homeostasis // not recorded /// 0051604 // protein maturation // inferred from electronic annotation /// 0051966 // regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway //  /// 0060075 // regulation of resting membrane potential // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from mutant phenotype /// 2000059 // negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // not recorded /// 0005765 // lysosomal membrane // not recorded /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005790 // smooth endoplasmic reticulum // inferred from direct assay /// 0005791 // rough endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005938 // cell cortex // not recorded /// 0009986 // cell surface // not recorded /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // traceable author statement /// 0016324 // apical plasma membrane // not recorded /// 0030018 // Z disc // not recorded /// 0030424 // axon // not recorded /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // not recorded /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031594 // neuromuscular junction // not recorded /// 0031965 // nuclear membrane // inferred from direct assay /// 0035253 // ciliary rootlet // not recorded /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // not recorded /// 0043198 // dendritic shaft // not recorded /// 0043227 // membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // not recorded /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // not recorded /// 0070765 // gamma-secretase complex // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from direct assay /// 0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0045296 // cadherin binding // not recorded </td> <td> -125.85 </td> <td> 179.40 </td> <td> -7.31 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209486_at </td> <td> 209486_at </td> <td> BC004546 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004546.1 /DEF=Homo sapiens, disrupter of silencing 10, clone MGC:11290, mRNA, complete cds.  /FEA=mRNA /PROD=disrupter of silencing 10 /DB_XREF=gi:13528698 /UG=Hs.322901 disrupter of silencing 10 /FL=gb:AL136590.1 gb:BC004546.1 gb:AF271212.1 gb:NM_020368.1 </td> <td> BC004546 </td> <td> UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) </td> <td> UTP3 </td> <td> 57050 </td> <td> NM_020368 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0016568 // chromatin modification // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 77.85 </td> <td> 102.08 </td> <td> 7.31 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212751_at </td> <td> 212751_at </td> <td> BG290646 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG290646 /FEA=EST /DB_XREF=gi:13047817 /DB_XREF=est:602388931F1 /CLONE=IMAGE:4517935 /UG=Hs.75355 ubiquitin-conjugating enzyme E2N (homologous to yeast UBC13) </td> <td> BG290646 </td> <td> ubiquitin-conjugating enzyme E2N </td> <td> UBE2N </td> <td> 7334 </td> <td> NM_003348 </td> <td> 0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0000729 // DNA double-strand break processing // inferred from mutant phenotype /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006282 // regulation of DNA repair // traceable author statement /// 0006301 // postreplication repair // inferred from mutant phenotype /// 0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0016567 // protein ubiquitination // traceable author statement /// 0016574 // histone ubiquitination // inferred from mutant phenotype /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031058 // positive regulation of histone modification // inferred from mutant phenotype /// 0033182 // regulation of histone ubiquitination // inferred from mutant phenotype /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045739 // positive regulation of DNA repair // inferred from mutant phenotype /// 0050852 // T cell receptor signaling pathway // inferred from mutant phenotype /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051443 // positive regulation of ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0031372 // UBC13-MMS2 complex // inferred from direct assay /// 0035370 // UBC13-UEV1A complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0043130 // ubiquitin binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 89.80 </td> <td> 196.93 </td> <td> 7.31 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 217781_s_at </td> <td> 217781_s_at </td> <td> NM_022473 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022473.1 /DEF=Homo sapiens zinc finger protein 106 (ZFP106), mRNA. /FEA=mRNA /GEN=ZFP106 /PROD=zinc finger protein 106 /DB_XREF=gi:11968022 /UG=Hs.15220 zinc finger protein 106 /FL=gb:AF205632.1 gb:NM_022473.1 </td> <td> NM_022473 </td> <td> zinc finger protein 106 </td> <td> ZNF106 </td> <td> 64397 </td> <td> NM_001284306 /// NM_001284307 /// NM_022473 /// XM_005254591 /// XM_005254592 </td> <td> 0008286 // insulin receptor signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0001515 // opioid peptide activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 119.78 </td> <td> 153.61 </td> <td> 7.30 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218178_s_at </td> <td> 218178_s_at </td> <td> NM_020412 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020412.1 /DEF=Homo sapiens CHMP1.5 protein (CHMP1.5), mRNA. /FEA=mRNA /GEN=CHMP1.5 /PROD=CHMP1.5 protein /DB_XREF=gi:9966900 /UG=Hs.42733 CHMP1.5 protein /FL=gb:AF281064.1 gb:NM_020412.1 </td> <td> NM_020412 </td> <td> charged multivesicular body protein 1B </td> <td> CHMP1B </td> <td> 57132 </td> <td> NM_020412 </td> <td> 0000910 // cytokinesis // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction </td> <td> -99.08 </td> <td> 258.46 </td> <td> -7.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 221699_s_at </td> <td> 221699_s_at </td> <td> AF334103 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF334103.1 /DEF=Homo sapiens nucleolar protein GU2 mRNA, complete cds. /FEA=mRNA /PROD=nucleolar protein GU2 /DB_XREF=gi:13540303 /FL=gb:AF334103.1 </td> <td> AF334103 </td> <td> DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 </td> <td> DDX50 </td> <td> 79009 </td> <td> NM_024045 /// XM_005270148 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -96.95 </td> <td> 257.65 </td> <td> -7.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 211977_at </td> <td> 211977_at </td> <td> AK024651 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024651.1 /DEF=Homo sapiens cDNA: FLJ20998 fis, clone CAE03125. /FEA=mRNA /DB_XREF=gi:10436978 /UG=Hs.6639 KIAA1624 protein </td> <td> AK024651 </td> <td> G protein-coupled receptor 107 </td> <td> GPR107 </td> <td> 57720 </td> <td> NM_001136557 /// NM_001136558 /// NM_001287346 /// NM_020960 /// XM_006717196 </td> <td> 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0019236 // response to pheromone // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -69.05 </td> <td> 116.80 </td> <td> -7.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201619_at </td> <td> 201619_at </td> <td> NM_006793 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006793.1 /DEF=Homo sapiens peroxiredoxin 3 (PRDX3), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=PRDX3 /PROD=peroxiredoxin 3 /DB_XREF=gi:5802973 /UG=Hs.75454 peroxiredoxin 3 /FL=gb:BC002685.1 gb:NM_006793.1 gb:D49396.1 </td> <td> NM_006793 </td> <td> peroxiredoxin 3 </td> <td> PRDX3 </td> <td> 10935 </td> <td> NM_006793 /// NM_014098 </td> <td> 0001893 // maternal placenta development // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from mutant phenotype /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0018171 // peptidyl-cysteine oxidation // inferred from direct assay /// 0030099 // myeloid cell differentiation // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0033673 // negative regulation of kinase activity // inferred from direct assay /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0034614 // cellular response to reactive oxygen species // inferred from mutant phenotype /// 0042542 // response to hydrogen peroxide // inferred from direct assay /// 0042744 // hydrogen peroxide catabolic process // inferred from genetic interaction /// 0042744 // hydrogen peroxide catabolic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051881 // regulation of mitochondrial membrane potential // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0008385 // IkappaB kinase complex // inferred from physical interaction /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004601 // peroxidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008379 // thioredoxin peroxidase activity // inferred from direct assay /// 0008785 // alkyl hydroperoxide reductase activity // non-traceable author statement /// 0016209 // antioxidant activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from mutant phenotype /// 0051920 // peroxiredoxin activity // inferred from electronic annotation </td> <td> 159.98 </td> <td> 488.34 </td> <td> 7.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 208990_s_at </td> <td> 208990_s_at </td> <td> AF132362 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF132362.1 /DEF=Homo sapiens hnRNP 2H9B mRNA, complete cds. /FEA=mRNA /PROD=hnRNP 2H9B /DB_XREF=gi:7739444 /UG=Hs.279681 heterogeneous nuclear ribonucleoprotein H3 (2H9) /FL=gb:AF132362.1 </td> <td> AF132362 </td> <td> heterogeneous nuclear ribonucleoprotein H3 (2H9) </td> <td> HNRNPH3 </td> <td> 3189 </td> <td> NM_012207 /// NM_021644 /// XM_005269748 /// XM_005269749 /// XM_005269751 /// XM_005269752 /// XM_005269753 /// XM_005269754 /// XM_006717816 /// XM_006717817 </td> <td> 0000398 // mRNA splicing, via spliceosome // non-traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 93.90 </td> <td> 248.95 </td> <td> 7.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213052_at </td> <td> 213052_at </td> <td> BF246917 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF246917 /FEA=EST /DB_XREF=gi:11161763 /DB_XREF=est:601854275F1 /CLONE=IMAGE:4074234 /UG=Hs.289075 protein kinase, cAMP-dependent, regulatory, type II, alpha </td> <td> BF246917 </td> <td> protein kinase, cAMP-dependent, regulatory, type II, alpha </td> <td> PRKAR2A </td> <td> 5576 </td> <td> NM_004157 /// XM_005265313 /// XM_005265314 /// XM_005265315 /// XR_427280 </td> <td> 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 2000480 // negative regulation of cAMP-dependent protein kinase activity // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005952 // cAMP-dependent protein kinase complex // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from direct assay /// 0008603 // cAMP-dependent protein kinase regulator activity // non-traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0034236 // protein kinase A catalytic subunit binding // inferred from physical interaction </td> <td> 96.25 </td> <td> 323.62 </td> <td> 7.27 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212125_at </td> <td> 212125_at </td> <td> NM_002883 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_002883.1 /DEF=Homo sapiens Ran GTPase activating protein 1 (RANGAP1), mRNA. /FEA=CDS /GEN=RANGAP1 /PROD=Ran GTPase activating protein 1 /DB_XREF=gi:4506410 /UG=Hs.183800 Ran GTPase activating protein 1 /FL=gb:NM_002883.1 </td> <td> NM_002883 </td> <td> Ran GTPase activating protein 1 </td> <td> RANGAP1 </td> <td> 5905 </td> <td> NM_001278651 /// NM_002883 /// XM_005261695 /// XM_005261696 /// XM_006724289 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0032853 // positive regulation of Ran GTPase activity // inferred from electronic annotation /// 0032853 // positive regulation of Ran GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046826 // negative regulation of protein export from nucleus // inferred from direct assay </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005098 // Ran GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -186.48 </td> <td> 283.21 </td> <td> -7.27 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 210284_s_at </td> <td> 210284_s_at </td> <td> AF241230 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF241230.1 /DEF=Homo sapiens TAK1-binding protein 2 mRNA, complete cds. /FEA=mRNA /PROD=TAK1-binding protein 2 /DB_XREF=gi:7677465 /UG=Hs.109727 TAK1-binding protein 2; KIAA0733 protein /FL=gb:AF241230.1 </td> <td> AF241230 </td> <td> TGF-beta activated kinase 1/MAP3K7 binding protein 2 </td> <td> TAB2 </td> <td> 23118 </td> <td> NM_001292034 /// NM_001292035 /// NM_015093 /// NM_145342 /// XM_006715403 </td> <td> 0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0007507 // heart development // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070530 // K63-linked polyubiquitin binding // inferred from direct assay </td> <td> -156.45 </td> <td> 216.72 </td> <td> -7.26 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201421_s_at </td> <td> 201421_s_at </td> <td> NM_024102 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024102.1 /DEF=Homo sapiens hypothetical protein MGC2722 (MGC2722), mRNA. /FEA=mRNA /GEN=MGC2722 /PROD=hypothetical protein MGC2722 /DB_XREF=gi:13129109 /UG=Hs.11039 hypothetical protein MGC2722 /FL=gb:BC001679.1 gb:NM_024102.1 </td> <td> NM_024102 </td> <td> WD repeat domain 77 </td> <td> WDR77 </td> <td> 79084 </td> <td> NM_024102 </td> <td> 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement /// 0060528 // secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development // inferred from electronic annotation /// 0060770 // negative regulation of epithelial cell proliferation involved in prostate gland development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from genetic interaction /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from genetic interaction /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0034709 // methylosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from genetic interaction </td> <td> 77.90 </td> <td> 98.05 </td> <td> 7.26 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200862_at </td> <td> 200862_at </td> <td> NM_014762 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014762.1 /DEF=Homo sapiens seladin-1 (KIAA0018), mRNA. /FEA=mRNA /GEN=KIAA0018 /PROD=seladin-1 /DB_XREF=gi:13375617 /UG=Hs.75616 seladin-1 /FL=gb:AF261758.1 gb:BC004375.1 gb:NM_014762.1 </td> <td> NM_014762 </td> <td> 24-dehydrocholesterol reductase </td> <td> DHCR24 </td> <td> 1718 </td> <td> NM_014762 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from mutant phenotype /// 0006695 // cholesterol biosynthetic process // inferred from sequence or structural similarity /// 0006695 // cholesterol biosynthetic process // non-traceable author statement /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006915 // apoptotic process // non-traceable author statement /// 0006979 // response to oxidative stress // inferred from expression pattern /// 0007050 // cell cycle arrest // non-traceable author statement /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009725 // response to hormone // inferred from electronic annotation /// 0009888 // tissue development // inferred from mutant phenotype /// 0016125 // sterol metabolic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0030539 // male genitalia development // inferred from electronic annotation /// 0031639 // plasminogen activation // inferred from electronic annotation /// 0042987 // amyloid precursor protein catabolic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043588 // skin development // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 1901214 // regulation of neuron death // non-traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // non-traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0008762 // UDP-N-acetylmuramate dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors // inferred from electronic annotation /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0042605 // peptide antigen binding // inferred from physical interaction /// 0050614 // delta24-sterol reductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation </td> <td> 190.65 </td> <td> 143.43 </td> <td> 7.26 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213070_at </td> <td> 213070_at </td> <td> AV682436 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV682436 /FEA=EST /DB_XREF=gi:10284299 /DB_XREF=est:AV682436 /CLONE=GKBABE08 /UG=Hs.5848 Homo sapiens mRNA; cDNA DKFZp564L222 (from clone DKFZp564L222) </td> <td> AV682436 </td> <td> phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha </td> <td> PIK3C2A </td> <td> 5286 </td> <td> NM_002645 /// XM_005252977 /// XM_005252978 /// XM_005252979 /// XM_005252980 </td> <td> 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006887 // exocytosis // traceable author statement /// 0006897 // endocytosis // inferred from mutant phenotype /// 0007154 // cell communication // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0014829 // vascular smooth muscle contraction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0048268 // clathrin coat assembly // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005942 // phosphatidylinositol 3-kinase complex // not recorded /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // not recorded /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0035004 // phosphatidylinositol 3-kinase activity // traceable author statement /// 0035005 // 1-phosphatidylinositol-4-phosphate 3-kinase activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation </td> <td> 126.90 </td> <td> 305.75 </td> <td> 7.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213005_s_at </td> <td> 213005_s_at </td> <td> D79994 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D79994.1 /DEF=Human mRNA for KIAA0172 gene, partial cds. /FEA=mRNA /GEN=KIAA0172 /DB_XREF=gi:1136403 /UG=Hs.77546 KIAA0172 protein </td> <td> D79994 </td> <td> KN motif and ankyrin repeat domains 1 </td> <td> KANK1 </td> <td> 23189 </td> <td> NM_001256876 /// NM_001256877 /// NM_015158 /// NM_153186 /// XM_005251410 /// XM_005251411 /// XM_005251413 /// XM_005251414 /// XM_005251415 /// XM_005251416 /// XM_005251417 /// XM_005251418 /// XM_005251419 /// XM_006716743 /// XM_006716744 /// XM_006716745 /// XM_006716746 /// XM_006716747 /// XM_006716748 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from direct assay /// 0030177 // positive regulation of Wnt signaling pathway // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030837 // negative regulation of actin filament polymerization // inferred from direct assay /// 0035024 // negative regulation of Rho protein signal transduction // inferred from mutant phenotype /// 0035413 // positive regulation of catenin import into nucleus // inferred from mutant phenotype /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from mutant phenotype /// 0090303 // positive regulation of wound healing // inferred from mutant phenotype /// 1900025 // negative regulation of substrate adhesion-dependent cell spreading // inferred from direct assay /// 1900028 // negative regulation of ruffle assembly // inferred from direct assay /// 2000114 // regulation of establishment of cell polarity // inferred from mutant phenotype /// 2000393 // negative regulation of lamellipodium morphogenesis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from direct assay </td> <td> -182.90 </td> <td> 367.20 </td> <td> -7.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213064_at </td> <td> 213064_at </td> <td> N64802 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N64802 /FEA=EST /DB_XREF=gi:1212631 /DB_XREF=est:yz31b05.s1 /CLONE=IMAGE:284625 /UG=Hs.173684 Homo sapiens mRNA; cDNA DKFZp762G207 (from clone DKFZp762G207) </td> <td> N64802 </td> <td> zinc finger CCCH-type containing 14 </td> <td> ZC3H14 </td> <td> 79882 </td> <td> NM_001160103 /// NM_001160104 /// NM_024824 /// NM_207660 /// NM_207661 /// NM_207662 /// XM_005268067 /// XM_005268068 /// XM_005268069 /// XM_005268070 /// XM_005268071 /// XM_005268073 /// XM_006720257 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 72.57 </td> <td> 110.61 </td> <td> 7.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 210732_s_at </td> <td> 210732_s_at </td> <td> AF342816 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF342816.1 /DEF=Homo sapiens colorectal carcinoma-derived galectin-8 variant II mRNA, complete cds.  /FEA=mRNA /PROD=colorectal carcinoma-derived galectin-8 variantII /DB_XREF=gi:13249300 /UG=Hs.4082 lectin, galactoside-binding, soluble, 8 (galectin 8) /FL=gb:AF342816.1 gb:AF074001.1 </td> <td> AF342816 </td> <td> lectin, galactoside-binding, soluble, 8 </td> <td> LGALS8 </td> <td> 3964 </td> <td> NM_006499 /// NM_201543 /// NM_201544 /// NM_201545 </td> <td> 0002317 // plasma cell differentiation // inferred from electronic annotation /// 0031295 // T cell costimulation // inferred from electronic annotation </td> <td> 0005615 // extracellular space // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> -78.75 </td> <td> 89.72 </td> <td> -7.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 211932_at </td> <td> 211932_at </td> <td> BF195526 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF195526 /FEA=EST /DB_XREF=gi:11082509 /DB_XREF=est:7n89c08.x1 /CLONE=IMAGE:3571599 /UG=Hs.249247 heterogeneous nuclear protein similar to rat helix destabilizing protein </td> <td> BF195526 </td> <td> heterogeneous nuclear ribonucleoprotein A3 </td> <td> HNRNPA3 </td> <td> 220988 </td> <td> NM_194247 /// XM_005246380 /// XM_005246381 /// XM_005246382 /// XM_006712365 /// XR_427076 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 100.77 </td> <td> 286.46 </td> <td> 7.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200779_at </td> <td> 200779_at </td> <td> NM_001675 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001675.1 /DEF=Homo sapiens activating transcription factor 4 (tax-responsive enhancer element B67) (ATF4), mRNA.  /FEA=mRNA /GEN=ATF4 /PROD=activating transcription factor 4 /DB_XREF=gi:4502264 /UG=Hs.181243 activating transcription factor 4 (tax-responsive enhancer element B67) /FL=gb:M86842.1 gb:NM_001675.1 </td> <td> NM_001675 </td> <td> activating transcription factor 4 </td> <td> ATF4 </td> <td> 468 </td> <td> NM_001675 /// NM_182810 </td> <td> 0006094 // gluconeogenesis // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0043267 // negative regulation of potassium ion transport // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032590 // dendrite membrane // inferred from electronic annotation </td> <td> 0001046 // core promoter sequence-specific DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -339.10 </td> <td> 888.67 </td> <td> -7.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218357_s_at </td> <td> 218357_s_at </td> <td> NM_012459 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012459.1 /DEF=Homo sapiens translocase of inner mitochondrial membrane 8 (yeast) homolog B (TIMM8B), mRNA.  /FEA=mRNA /GEN=TIMM8B /PROD=translocase of inner mitochondrial membrane 8(yeast) homolog B /DB_XREF=gi:6912711 /UG=Hs.279915 translocase of inner mitochondrial membrane 8 (yeast) homolog B /FL=gb:AF150087.1 gb:AF152350.1 gb:NM_012459.1 </td> <td> NM_012459 </td> <td> translocase of inner mitochondrial membrane 8 homolog B (yeast) </td> <td> TIMM8B </td> <td> 26521 </td> <td> NM_012459 /// NR_028383 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0072321 // chaperone-mediated protein transport // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0042719 // mitochondrial intermembrane space protein transporter complex // traceable author statement </td> <td> 0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 216.98 </td> <td> 577.86 </td> <td> 7.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213184_at </td> <td> 213184_at </td> <td> N48361 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N48361 /FEA=EST /DB_XREF=gi:1189527 /DB_XREF=est:yy79g10.s1 /CLONE=IMAGE:279810 /UG=Hs.15787 Homo sapiens mRNA; cDNA DKFZp564O1016 (from clone DKFZp564O1016) </td> <td> N48361 </td> <td> SUMO1/sentrin specific peptidase 5 </td> <td> SENP5 </td> <td> 205564 </td> <td> NM_152699 /// XM_005269310 /// XM_005269311 /// XM_005269312 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016925 // protein sumoylation // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 72.70 </td> <td> 72.92 </td> <td> 7.22 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 208101_s_at </td> <td> 208101_s_at </td> <td> NM_030914 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030914.1 /DEF=Homo sapiens hypothetical protein MGC2668 (MGC2668), mRNA. /FEA=mRNA /GEN=MGC2668 /PROD=hypothetical protein MGC2668 /DB_XREF=gi:13569869 /FL=gb:NM_030914.1 </td> <td> NM_030914 </td> <td> ubiquitin related modifier 1 </td> <td> URM1 </td> <td> 81605 </td> <td> NM_001135947 /// NM_001265582 /// NM_030914 /// NR_049743 </td> <td> 0002098 // tRNA wobble uridine modification // inferred from mutant phenotype /// 0008033 // tRNA processing // inferred from electronic annotation /// 0032447 // protein urmylation // inferred from electronic annotation /// 0034227 // tRNA thio-modification // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred by curator /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016783 // sulfurtransferase activity // inferred from direct assay </td> <td> 72.33 </td> <td> 135.79 </td> <td> 7.22 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213086_s_at </td> <td> 213086_s_at </td> <td> BF341845 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF341845 /FEA=EST /DB_XREF=gi:11288369 /DB_XREF=est:602016378F1 /CLONE=IMAGE:4151970 /UG=Hs.84264 acidic protein rich in leucines </td> <td> BF341845 </td> <td> casein kinase 1, alpha 1 </td> <td> CSNK1A1 </td> <td> 1452 </td> <td> NM_001025105 /// NM_001271741 /// NM_001271742 /// NM_001892 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -213.22 </td> <td> 571.06 </td> <td> -7.21 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204243_at </td> <td> 204243_at </td> <td> NM_012421 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012421.1 /DEF=Homo sapiens rearranged L-myc fusion sequence (RLF), mRNA. /FEA=mRNA /GEN=RLF /PROD=rearranged L-myc fusion sequence /DB_XREF=gi:6912631 /UG=Hs.13321 rearranged L-myc fusion sequence /FL=gb:U22377.1 gb:NM_012421.1 </td> <td> NM_012421 </td> <td> rearranged L-myc fusion </td> <td> RLF </td> <td> 6018 </td> <td> NM_012421 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0009294 // DNA mediated transformation // non-traceable author statement /// 0015074 // DNA integration // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0051276 // chromosome organization // inferred from direct assay /// 0051276 // chromosome organization // non-traceable author statement </td> <td> 0005634 // nucleus // inferred by curator </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -141.37 </td> <td> 166.79 </td> <td> -7.20 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201051_at </td> <td> 201051_at </td> <td> BE560202 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE560202 /FEA=EST /DB_XREF=gi:9803834 /DB_XREF=est:601347428F1 /CLONE=IMAGE:3688350 /UG=Hs.285013 putative human HLA class II associated protein I /FL=gb:U60823.1 gb:U73477.1 gb:AF025684.1 gb:NM_006305.1 </td> <td> BE560202 </td> <td> acidic (leucine-rich) nuclear phosphoprotein 32 family, member A </td> <td> ANP32A </td> <td> 8125 </td> <td> NM_006305 /// XM_006720707 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 123.52 </td> <td> 399.94 </td> <td> 7.19 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201592_at </td> <td> 201592_at </td> <td> NM_003756 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003756.1 /DEF=Homo sapiens eukaryotic translation initiation factor 3, subunit 3 (gamma, 40kD) (EIF3S3), mRNA.  /FEA=mRNA /GEN=EIF3S3 /PROD=eukaryotic translation initiation factor 3,subunit 3 (gamma, 40kD) /DB_XREF=gi:4503514 /UG=Hs.58189 eukaryotic translation initiation factor 3, subunit 3 (gamma, 40kD) /FL=gb:BC000386.1 gb:U54559.1 gb:NM_003756.1 </td> <td> NM_003756 </td> <td> eukaryotic translation initiation factor 3, subunit H </td> <td> EIF3H </td> <td> 8667 </td> <td> NM_003756 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -213.58 </td> <td> 835.64 </td> <td> -7.18 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202720_at </td> <td> 202720_at </td> <td> NM_015641 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015641.1 /DEF=Homo sapiens testin (DKFZP586B2022), mRNA. /FEA=mRNA /GEN=DKFZP586B2022 /PROD=testin /DB_XREF=gi:7661665 /UG=Hs.165986 testin /FL=gb:AF245356.1 gb:AF245357.1 gb:BC001451.1 gb:NM_015641.1 </td> <td> NM_015641 </td> <td> testis derived transcript (3 LIM domains) </td> <td> TES </td> <td> 26136 </td> <td> NM_015641 /// NM_152829 /// XM_005250258 </td> <td> 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0008270 // zinc ion binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -287.03 </td> <td> 268.49 </td> <td> -7.18 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 215933_s_at </td> <td> 215933_s_at </td> <td> Z21533 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:Z21533.1 /DEF=H.sapiens HEX gene encoding homeobox related protein. /FEA=mRNA /GEN=HEX /PROD=homeobox related protein /DB_XREF=gi:32068 /UG=Hs.118651 hematopoietically expressed homeobox </td> <td> Z21533 </td> <td> hematopoietically expressed homeobox </td> <td> HHEX </td> <td> 3087 </td> <td> NM_002729 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002573 // myeloid leukocyte differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0007049 // cell cycle // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0009611 // response to wounding // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0010621 // negative regulation of transcription by transcription factor localization // inferred by curator /// 0010944 // negative regulation of transcription by competitive promoter binding // traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from sequence or structural similarity /// 0016973 // poly(A)+ mRNA export from nucleus // inferred from mutant phenotype /// 0022027 // interkinetic nuclear migration // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred by curator /// 0030177 // positive regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0030183 // B cell differentiation // inferred from sequence or structural similarity /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030948 // negative regulation of vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0031016 // pancreas development // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048729 // tissue morphogenesis // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from electronic annotation /// 0060431 // primary lung bud formation // inferred from electronic annotation /// 0061009 // common bile duct development // inferred from electronic annotation /// 0061010 // gall bladder development // inferred from electronic annotation /// 0061011 // hepatic duct development // inferred from electronic annotation /// 0061017 // hepatoblast differentiation // inferred from electronic annotation /// 0070365 // hepatocyte differentiation // inferred from electronic annotation /// 0071103 // DNA conformation change // inferred from direct assay /// 0090009 // primitive streak formation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0032993 // protein-DNA complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008190 // eukaryotic initiation factor 4E binding // inferred from direct assay /// 0008301 // DNA binding, bending // inferred from direct assay /// 0017025 // TBP-class protein binding // traceable author statement /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // traceable author statement /// 0070491 // repressing transcription factor binding // inferred from direct assay /// 0071837 // HMG box domain binding // inferred from electronic annotation </td> <td> -178.07 </td> <td> 478.66 </td> <td> -7.17 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204060_s_at </td> <td> 204060_s_at </td> <td> NM_005044 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005044.1 /DEF=Homo sapiens protein kinase, X-linked (PRKX), mRNA. /FEA=mRNA /GEN=PRKX /PROD=protein kinase, X-linked /DB_XREF=gi:4826947 /UG=Hs.147996 protein kinase, X-linked /FL=gb:NM_005044.1 </td> <td> NM_005044 </td> <td> protein kinase, X-linked /// protein kinase, Y-linked, pseudogene </td> <td> PRKX /// PRKY </td> <td> 5613 /// 5616 </td> <td> NM_002760 /// NM_005044 /// NR_028062 /// XM_005274560 /// XM_005274561 </td> <td> 0001525 // angiogenesis // inferred from mutant phenotype /// 0001935 // endothelial cell proliferation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030334 // regulation of cell migration // inferred from direct assay /// 0031589 // cell-substrate adhesion // inferred from mutant phenotype /// 0043542 // endothelial cell migration // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0060562 // epithelial tube morphogenesis // inferred from direct assay /// 0060993 // kidney morphogenesis // inferred from direct assay /// 2000696 // regulation of epithelial cell differentiation involved in kidney development // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 88.03 </td> <td> 113.06 </td> <td> 7.17 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 208671_at </td> <td> 208671_at </td> <td> AF164794 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF164794.1 /DEF=Homo sapiens Diff33 protein homolog mRNA, complete cds. /FEA=mRNA /PROD=Diff33 protein homolog /DB_XREF=gi:8895090 /UG=Hs.146668 KIAA1253 protein /FL=gb:AF164794.1 </td> <td> AF164794 </td> <td> serine incorporator 1 </td> <td> SERINC1 </td> <td> 57515 </td> <td> NM_020755 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006658 // phosphatidylserine metabolic process // inferred from sequence or structural similarity /// 0006665 // sphingolipid metabolic process // inferred from sequence or structural similarity /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0015825 // L-serine transport // inferred from sequence or structural similarity /// 0051347 // positive regulation of transferase activity // inferred from sequence or structural similarity </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015194 // L-serine transmembrane transporter activity // inferred from sequence or structural similarity </td> <td> -179.80 </td> <td> 378.15 </td> <td> -7.17 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 210999_s_at </td> <td> 210999_s_at </td> <td> U66065 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U66065.1 /DEF=Human Grb10- and Grb-IR-related splice variant 1 mRNA, complete cds.  /FEA=mRNA /PROD=Grb10- and Grb-IR-related splice variant 1 /DB_XREF=gi:1518100 /UG=Hs.81875 growth factor receptor-bound protein 10 /FL=gb:U66065.1 gb:U69276.1 gb:NM_005311.1 </td> <td> U66065 </td> <td> growth factor receptor-bound protein 10 </td> <td> GRB10 </td> <td> 2887 </td> <td> NM_001001549 /// NM_001001550 /// NM_001001555 /// NM_005311 /// XM_005271760 /// XM_005271761 /// XM_005271765 /// XM_005271766 /// XM_005271767 /// XM_006715703 /// XM_006715704 /// XM_006715705 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from direct assay /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0032868 // response to insulin // inferred from sequence or structural similarity /// 0042326 // negative regulation of phosphorylation // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from sequence or structural similarity /// 0045719 // negative regulation of glycogen biosynthetic process // inferred from electronic annotation /// 0045719 // negative regulation of glycogen biosynthetic process // inferred from sequence or structural similarity /// 0046325 // negative regulation of glucose import // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement </td> <td> 0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005158 // insulin receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> -174.70 </td> <td> 290.25 </td> <td> -7.16 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 221423_s_at </td> <td> 221423_s_at </td> <td> NM_030799 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030799.1 /DEF=Homo sapiens hypothetical protein AF140225 (AF140225), mRNA. /FEA=CDS /GEN=AF140225 /PROD=hypothetical protein AF140225 /DB_XREF=gi:13540583 /FL=gb:NM_030799.1 </td> <td> NM_030799 </td> <td> Yip1 domain family, member 5 </td> <td> YIPF5 </td> <td> 81555 </td> <td> NM_001024947 /// NM_001271732 /// NM_030799 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0060628 // regulation of ER to Golgi vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030134 // ER to Golgi transport vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from electronic annotation /// 0070971 // endoplasmic reticulum exit site // inferred from electronic annotation </td> <td>  </td> <td> -203.62 </td> <td> 317.64 </td> <td> -7.16 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 205409_at </td> <td> 205409_at </td> <td> NM_005253 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005253.1 /DEF=Homo sapiens FOS-like antigen 2 (FOSL2), mRNA. /FEA=mRNA /GEN=FOSL2 /PROD=FOS-like antigen 2 /DB_XREF=gi:4885244 /UG=Hs.301612 FOS-like antigen 2 /FL=gb:NM_005253.1 </td> <td> NM_005253 </td> <td> FOS-like antigen 2 </td> <td> FOSL2 </td> <td> 2355 </td> <td> NM_005253 /// XM_005264231 /// XM_006711976 /// XM_006711977 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0008219 // cell death // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -72.80 </td> <td> 55.35 </td> <td> -7.15 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 211023_at </td> <td> 211023_at </td> <td> AL117618 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL117618.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564K0164 (from clone DKFZp564K0164); complete cds.  /FEA=mRNA /GEN=DKFZp564K0164 /PROD=hypothetical protein /DB_XREF=gi:5912196 /UG=Hs.979 pyruvate dehydrogenase (lipoamide) beta /FL=gb:AL117618.1 </td> <td> AL117618 </td> <td> pyruvate dehydrogenase (lipoamide) beta </td> <td> PDHB </td> <td> 5162 </td> <td> NM_000925 /// NM_001173468 /// NR_033384 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006086 // acetyl-CoA biosynthetic process from pyruvate // inferred from direct assay /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006099 // tricarboxylic acid cycle // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0045254 // pyruvate dehydrogenase complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004738 // pyruvate dehydrogenase activity // inferred from direct assay /// 0004739 // pyruvate dehydrogenase (acetyl-transferring) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation </td> <td> 198.18 </td> <td> 300.44 </td> <td> 7.15 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200887_s_at </td> <td> 200887_s_at </td> <td> NM_007315 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007315.1 /DEF=Homo sapiens signal transducer and activator of transcription 1, 91kD (STAT1), mRNA.  /FEA=mRNA /GEN=STAT1 /PROD=signal transducer and activator of transcription1, 91kD /DB_XREF=gi:6274551 /UG=Hs.21486 signal transducer and activator of transcription 1, 91kD /FL=gb:M97935.1 gb:NM_007315.1 </td> <td> NM_007315 </td> <td> signal transducer and activator of transcription 1, 91kDa </td> <td> STAT1 </td> <td> 6772 </td> <td> NM_007315 /// NM_139266 /// XM_006712718 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0003340 // negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from direct assay /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008015 // blood circulation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from direct assay /// 0034097 // response to cytokine // inferred from sequence or structural similarity /// 0034240 // negative regulation of macrophage fusion // inferred from electronic annotation /// 0035458 // cellular response to interferon-beta // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from sequence or structural similarity /// 0043542 // endothelial cell migration // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity /// 0051591 // response to cAMP // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // inferred from direct assay /// 0060333 // interferon-gamma-mediated signaling pathway // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // inferred from sequence or structural similarity /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0061326 // renal tubule development // inferred from mutant phenotype /// 0072136 // metanephric mesenchymal cell proliferation involved in metanephros development // inferred from sequence or structural similarity /// 0072162 // metanephric mesenchymal cell differentiation // inferred from sequence or structural similarity /// 0072308 // negative regulation of metanephric nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0030424 // axon // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000983 // RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031730 // CCR5 chemokine receptor binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 173.00 </td> <td> 219.22 </td> <td> 7.15 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 210869_s_at </td> <td> 210869_s_at </td> <td> M29277 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M29277.1 /DEF=Human isolate JuSo MUC18 glycoprotein mRNA (3 variant), complete cds.  /FEA=mRNA /PROD=MUC18 glycoprotein /DB_XREF=gi:530047 /UG=Hs.211579 melanoma adhesion molecule /FL=gb:M29277.1 </td> <td> M29277 </td> <td> melanoma cell adhesion molecule /// microRNA 6756 </td> <td> MCAM /// MIR6756 </td> <td> 4162 /// 102465453 </td> <td> NM_006500 /// NR_106814 /// XM_005271551 /// XM_005271552 /// XM_006718836 /// XM_006718837 /// XM_006718838 </td> <td> 0003094 // glomerular filtration // inferred from expression pattern /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0061042 // vascular wound healing // inferred from expression pattern </td> <td> 0005886 // plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 480.15 </td> <td> 1395.58 </td> <td> 7.15 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204768_s_at </td> <td> 204768_s_at </td> <td> NM_004111 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004111.3 /DEF=Homo sapiens flap structure-specific endonuclease 1 (FEN1), mRNA. /FEA=mRNA /GEN=FEN1 /PROD=flap structure-specific endonuclease 1 /DB_XREF=gi:6325465 /UG=Hs.4756 flap structure-specific endonuclease 1 /FL=gb:BC000323.1 gb:NM_004111.3 </td> <td> NM_004111 </td> <td> flap structure-specific endonuclease 1 </td> <td> FEN1 </td> <td> 2237 </td> <td> NM_004111 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0000737 // DNA catabolic process, endonucleolytic // inferred from direct assay /// 0000737 // DNA catabolic process, endonucleolytic // inferred from electronic annotation /// 0000737 // DNA catabolic process, endonucleolytic // inferred from mutant phenotype /// 0000738 // DNA catabolic process, exonucleolytic // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009650 // UV protection // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0043137 // DNA replication, removal of RNA primer // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // traceable author statement /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003684 // damaged DNA binding // traceable author statement /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // traceable author statement /// 0004523 // RNA-DNA hybrid ribonuclease activity // inferred from direct assay /// 0004527 // exonuclease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008309 // double-stranded DNA exodeoxyribonuclease activity // traceable author statement /// 0008409 // 5'-3' exonuclease activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0017108 // 5'-flap endonuclease activity // inferred from direct assay /// 0017108 // 5'-flap endonuclease activity // inferred from mutant phenotype /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048256 // flap endonuclease activity // inferred from electronic annotation </td> <td> 94.92 </td> <td> 99.59 </td> <td> 7.14 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203804_s_at </td> <td> 203804_s_at </td> <td> NM_006107 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006107.1 /DEF=Homo sapiens acid-inducible phosphoprotein (OA48-18), mRNA. /FEA=mRNA /GEN=OA48-18 /PROD=acid-inducible phosphoprotein /DB_XREF=gi:5174618 /UG=Hs.278670 acid-inducible phosphoprotein /FL=gb:AF069250.1 gb:NM_006107.1 </td> <td> NM_006107 </td> <td> LUC7-like 3 (S. cerevisiae) </td> <td> LUC7L3 </td> <td> 51747 </td> <td> NM_006107 /// NM_016424 /// XM_005257448 /// XM_005257449 /// XM_005257450 /// XM_005257451 /// XM_005257452 /// XM_005257454 /// XM_005257455 /// XM_006721943 /// XR_243663 </td> <td> 0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005685 // U1 snRNP // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 208.60 </td> <td> 190.05 </td> <td> 7.13 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202687_s_at </td> <td> 202687_s_at </td> <td> U57059 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U57059.1 /DEF=Homo sapiens Apo-2 ligand mRNA, complete cds. /FEA=mRNA /PROD=Apo-2 ligand /DB_XREF=gi:1336207 /UG=Hs.83429 tumor necrosis factor (ligand) superfamily, member 10 /FL=gb:U37518.1 gb:U57059.1 gb:NM_003810.1 </td> <td> U57059 </td> <td> tumor necrosis factor (ligand) superfamily, member 10 </td> <td> TNFSF10 </td> <td> 8743 </td> <td> NM_001190942 /// NM_001190943 /// NM_003810 /// NR_033994 </td> <td> 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0097190 // apoptotic signaling pathway // traceable author statement /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from direct assay /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032813 // tumor necrosis factor receptor superfamily binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -83.75 </td> <td> 66.53 </td> <td> -7.13 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209669_s_at </td> <td> 209669_s_at </td> <td> BC003049 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003049.1 /DEF=Homo sapiens, Similar to DKFZP564M2423 protein, clone MGC:684, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to DKFZP564M2423 protein /DB_XREF=gi:12804376 /UG=Hs.324067 Homo sapiens, Similar to DKFZP564M2423 protein, clone MGC:684, mRNA, complete cds /FL=gb:BC003049.1 </td> <td> BC003049 </td> <td> SERPINE1 mRNA binding protein 1 </td> <td> SERBP1 </td> <td> 26135 </td> <td> NM_001018067 /// NM_001018068 /// NM_001018069 /// NM_015640 </td> <td> 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 124.05 </td> <td> 415.40 </td> <td> 7.13 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201225_s_at </td> <td> 201225_s_at </td> <td> NM_005839 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005839.1 /DEF=Homo sapiens SerArg-related nuclear matrix protein (plenty of prolines 101-like) (SRM160), mRNA.  /FEA=mRNA /GEN=SRM160 /PROD=SerArg-related nuclear matrix protein (plentyof prolines 101-like) /DB_XREF=gi:5032118 /UG=Hs.18192 SerArg-related nuclear matrix protein (plenty of prolines 101-like) /FL=gb:AF048977.1 gb:NM_005839.1 </td> <td> NM_005839 </td> <td> serine/arginine repetitive matrix 1 </td> <td> SRRM1 </td> <td> 10250 </td> <td> NM_005839 /// XM_005245717 /// XM_005245718 /// XM_005245719 /// XM_005245720 /// XM_005245721 /// XM_005245722 /// XR_241182 /// XR_241183 </td> <td> 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 203.20 </td> <td> 382.20 </td> <td> 7.12 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201952_at </td> <td> 201952_at </td> <td> AA156721 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA156721 /FEA=EST /DB_XREF=gi:1728335 /DB_XREF=est:zl18b04.s1 /CLONE=IMAGE:502255 /UG=Hs.10247 activated leucocyte cell adhesion molecule /FL=gb:NM_001627.1 gb:L38608.1 </td> <td> AA156721 </td> <td> activated leukocyte cell adhesion molecule </td> <td> ALCAM </td> <td> 214 </td> <td> NM_001243280 /// NM_001243281 /// NM_001243283 /// NM_001627 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008045 // motor neuron axon guidance // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -278.55 </td> <td> 711.58 </td> <td> -7.12 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202673_at </td> <td> 202673_at </td> <td> NM_003859 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003859.1 /DEF=Homo sapiens dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit (DPM1), mRNA.  /FEA=mRNA /GEN=DPM1 /PROD=dolichyl-phosphate mannosyltransferasepolypeptide 1 /DB_XREF=gi:4503362 /UG=Hs.5085 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit /FL=gb:D86198.1 gb:NM_003859.1 </td> <td> NM_003859 </td> <td> dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit </td> <td> DPM1 </td> <td> 8813 </td> <td> NM_003859 /// XM_005260600 /// XM_005260601 /// XM_005260602 /// XR_244156 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019348 // dolichol metabolic process // inferred from direct assay /// 0019673 // GDP-mannose metabolic process // inferred from electronic annotation /// 0035268 // protein mannosylation // inferred from direct assay /// 0035269 // protein O-linked mannosylation // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0033185 // dolichol-phosphate-mannose synthase complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004169 // dolichyl-phosphate-mannose-protein mannosyltransferase activity // inferred from direct assay /// 0004582 // dolichyl-phosphate beta-D-mannosyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005537 // mannose binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0043178 // alcohol binding // inferred from electronic annotation </td> <td> 181.28 </td> <td> 279.66 </td> <td> 7.11 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201709_s_at </td> <td> 201709_s_at </td> <td> NM_003634 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003634.1 /DEF=Homo sapiens NIPSNAP, C. elegans, homolog 1 (NIPSNAP1), mRNA. /FEA=mRNA /GEN=NIPSNAP1 /PROD=NIPSNAP, C. elegans, homolog 1 /DB_XREF=gi:4505398 /UG=Hs.173878 NIPSNAP, C. elegans, homolog 1 /FL=gb:BC002371.1 gb:NM_003634.1 </td> <td> NM_003634 </td> <td> nipsnap homolog 1 (C. elegans) </td> <td> NIPSNAP1 </td> <td> 8508 </td> <td> NM_001202502 /// NM_003634 /// XM_005261789 </td> <td> 0019233 // sensory perception of pain // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0097060 // synaptic membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0042165 // neurotransmitter binding // inferred from electronic annotation </td> <td> 88.10 </td> <td> 247.53 </td> <td> 7.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 40148_at </td> <td> 40148_at </td> <td> U62325 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. U62325:Human FE65-like protein (hFE65L) mRNA, partial cds /cds=(0,2194) /gb=U62325 /gi=1657751 /ug=Hs.15740 /len=2896 </td> <td> U62325 </td> <td> amyloid beta (A4) precursor protein-binding, family B, member 2 </td> <td> APBB2 </td> <td> 323 </td> <td> NM_001166050 /// NM_001166051 /// NM_001166052 /// NM_001166053 /// NM_001166054 /// NM_004307 /// NM_173075 /// XM_005248101 /// XM_006714005 /// XM_006714006 /// XM_006714007 /// XM_006714008 /// XM_006714009 /// XM_006714010 /// XM_006714011 /// XM_006714012 </td> <td> 0001764 // neuron migration // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from sequence or structural similarity /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from sequence or structural similarity </td> <td> 0001540 // beta-amyloid binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from sequence or structural similarity </td> <td> -89.20 </td> <td> 110.25 </td> <td> -7.09 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201285_at </td> <td> 201285_at </td> <td> NM_013446 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013446.1 /DEF=Homo sapiens makorin, ring finger protein, 1 (MKRN1), mRNA. /FEA=mRNA /GEN=MKRN1 /PROD=makorin, ring finger protein, 1 /DB_XREF=gi:7305272 /UG=Hs.7838 makorin, ring finger protein, 1 /FL=gb:AL136812.1 gb:AF192784.1 gb:NM_013446.1 </td> <td> NM_013446 </td> <td> makorin ring finger protein 1 </td> <td> MKRN1 </td> <td> 23608 </td> <td> NM_001145125 /// NM_001291663 /// NM_013446 /// NR_117084 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td>  </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -126.82 </td> <td> 285.04 </td> <td> -7.09 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202117_at </td> <td> 202117_at </td> <td> BG468434 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG468434 /FEA=EST /DB_XREF=gi:13400704 /DB_XREF=est:602510404F1 /CLONE=IMAGE:4644528 /UG=Hs.138860 Rho GTPase activating protein 1 /FL=gb:NM_004308.1 </td> <td> BG468434 </td> <td> Rho GTPase activating protein 1 </td> <td> ARHGAP1 </td> <td> 392 </td> <td> NM_004308 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0009967 // positive regulation of signal transduction // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // non-traceable author statement /// 0032855 // positive regulation of Rac GTPase activity // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // non-traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0030675 // Rac GTPase activator activity // inferred from electronic annotation </td> <td> 77.33 </td> <td> 338.61 </td> <td> 7.08 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 214437_s_at </td> <td> 214437_s_at </td> <td> NM_005412 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_005412.1 /DEF=Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2), mRNA.  /FEA=CDS /GEN=SHMT2 /PROD=serine hydroxymethyltransferase 2(mitochondrial) /DB_XREF=gi:4885594 /UG=Hs.75069 serine hydroxymethyltransferase 2 (mitochondrial) /FL=gb:NM_005412.1 </td> <td> NM_005412 </td> <td> serine hydroxymethyltransferase 2 (mitochondrial) </td> <td> SHMT2 </td> <td> 6472 </td> <td> NM_001166356 /// NM_001166357 /// NM_001166358 /// NM_001166359 /// NM_005412 /// NR_029415 /// NR_029416 /// NR_029417 /// NR_048562 </td> <td> 0006544 // glycine metabolic process // inferred from electronic annotation /// 0006545 // glycine biosynthetic process // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from electronic annotation /// 0006564 // L-serine biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0019264 // glycine biosynthetic process from serine // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004372 // glycine hydroxymethyltransferase activity // inferred from direct assay /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008732 // L-allo-threonine aldolase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> -166.05 </td> <td> 171.05 </td> <td> -7.08 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209386_at </td> <td> 209386_at </td> <td> AI346835 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI346835 /FEA=EST /DB_XREF=gi:4084041 /DB_XREF=est:qp58g11.x1 /CLONE=IMAGE:1927268 /UG=Hs.3337 transmembrane 4 superfamily member 1 /FL=gb:M90657.1 </td> <td> AI346835 </td> <td> transmembrane 4 L six family member 1 </td> <td> TM4SF1 </td> <td> 4071 </td> <td> NM_014220 </td> <td>  </td> <td> 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 787.10 </td> <td> 1777.58 </td> <td> 7.06 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203303_at </td> <td> 203303_at </td> <td> NM_006520 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006520.1 /DEF=Homo sapiens t-complex-associated-testis-expressed 1-like (TCTE1L), mRNA.  /FEA=mRNA /GEN=TCTE1L /PROD=t-complex-associated-testis-expressed 1-like /DB_XREF=gi:5730086 /UG=Hs.75307 t-complex-associated-testis-expressed 1-like /FL=gb:BC000968.2 gb:U02556.1 gb:NM_006520.1 </td> <td> NM_006520 </td> <td> dynein, light chain, Tctex-type 3 </td> <td> DYNLT3 </td> <td> 6990 </td> <td> NM_006520 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007346 // regulation of mitotic cell cycle // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030286 // dynein complex // inferred from electronic annotation </td> <td> 0003774 // motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> 110.60 </td> <td> 286.45 </td> <td> 7.05 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203175_at </td> <td> 203175_at </td> <td> NM_001665 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001665.1 /DEF=Homo sapiens ras homolog gene family, member G (rho G) (ARHG), mRNA.  /FEA=mRNA /GEN=ARHG /PROD=ras homolog gene family, member G (rho G) /DB_XREF=gi:4502218 /UG=Hs.75082 ras homolog gene family, member G (rho G) /FL=gb:NM_001665.1 </td> <td> NM_001665 </td> <td> ras homolog family member G </td> <td> RHOG </td> <td> 391 </td> <td> NM_001665 /// XM_005252916 </td> <td> 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from direct assay /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // inferred from direct assay /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0032863 // activation of Rac GTPase activity // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0060326 // cell chemotaxis // inferred from mutant phenotype /// 0090004 // positive regulation of establishment of protein localization to plasma membrane // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 114.60 </td> <td> 306.90 </td> <td> 7.04 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 205070_at </td> <td> 205070_at </td> <td> NM_019071 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019071.1 /DEF=Homo sapiens inhibitor of growth family, member 3 (ING3), mRNA. /FEA=mRNA /GEN=ING3 /PROD=inhibitor of growth family, member 3 /DB_XREF=gi:9506658 /UG=Hs.143198 inhibitor of growth family, member 3 /FL=gb:AF074968.1 gb:AY007790.1 gb:NM_019071.1 </td> <td> NM_019071 </td> <td> inhibitor of growth family, member 3 </td> <td> ING3 </td> <td> 54556 </td> <td> NM_019071 /// NM_198266 /// NM_198267 </td> <td> 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0043968 // histone H2A acetylation // inferred from direct assay </td> <td> 0000812 // Swr1 complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0032777 // Piccolo NuA4 histone acetyltransferase complex // inferred from direct assay /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay </td> <td> 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035064 // methylated histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -62.95 </td> <td> 94.67 </td> <td> -7.04 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 205798_at </td> <td> 205798_at </td> <td> NM_002185 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002185.1 /DEF=Homo sapiens interleukin 7 receptor (IL7R), mRNA. /FEA=mRNA /GEN=IL7R /PROD=interleukin 7 receptor /DB_XREF=gi:4504678 /UG=Hs.237868 interleukin 7 receptor /FL=gb:M29696.1 gb:NM_002185.1 </td> <td> NM_002185 </td> <td> interleukin 7 receptor </td> <td> IL7R </td> <td> 3575 </td> <td> NM_002185 /// NR_120485 /// XM_005248299 /// XM_005248300 </td> <td> 0000018 // regulation of DNA recombination // traceable author statement /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001915 // negative regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002377 // immunoglobulin production // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0033089 // positive regulation of T cell differentiation in thymus // inferred from electronic annotation /// 0038111 // interleukin-7-mediated signaling pathway // traceable author statement /// 0042100 // B cell proliferation // inferred from electronic annotation /// 0048535 // lymph node development // inferred from electronic annotation /// 0048872 // homeostasis of number of cells // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003823 // antigen binding // traceable author statement /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004917 // interleukin-7 receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -138.30 </td> <td> 114.88 </td> <td> -7.04 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213129_s_at </td> <td> 213129_s_at </td> <td> AI970157 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI970157 /FEA=EST /DB_XREF=gi:5766983 /DB_XREF=est:wq89h08.x1 /CLONE=IMAGE:2479263 /UG=Hs.77631 glycine cleavage system protein H (aminomethyl carrier) </td> <td> AI970157 </td> <td> glycine cleavage system protein H (aminomethyl carrier) /// glycine cleavage system H protein, mitochondrial-like </td> <td> GCSH /// LOC101060817 </td> <td> 2653 /// 101060817 </td> <td> NM_004483 /// NR_033249 /// XM_003960892 </td> <td> 0006546 // glycine catabolic process // traceable author statement /// 0019464 // glycine decarboxylation via glycine cleavage system // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0032259 // methylation // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005960 // glycine cleavage complex // inferred from electronic annotation </td> <td> 0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation </td> <td> 122.57 </td> <td> 194.99 </td> <td> 7.03 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203076_s_at </td> <td> 203076_s_at </td> <td> U65019 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U65019.1 /DEF=Human MAD-related protein 2 (MADR2) mRNA, complete cds. /FEA=mRNA /GEN=MADR2 /PROD=MAD-related protein 2 /DB_XREF=gi:1575529 /UG=Hs.82483 MAD (mothers against decapentaplegic, Drosophila) homolog 2 /FL=gb:U59911.1 gb:U68018.1 gb:U65019.1 gb:AF027964.1 gb:NM_005901.1 </td> <td> U65019 </td> <td> SMAD family member 2 </td> <td> SMAD2 </td> <td> 4087 </td> <td> NM_001003652 /// NM_001135937 /// NM_005901 /// XM_005258259 /// XM_006722451 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001706 // endoderm formation // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007182 // common-partner SMAD protein phosphorylation // inferred from direct assay /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0007352 // zygotic specification of dorsal/ventral axis // inferred from mutant phenotype /// 0007369 // gastrulation // traceable author statement /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030513 // positive regulation of BMP signaling pathway // inferred from mutant phenotype /// 0031016 // pancreas development // inferred from electronic annotation /// 0031053 // primary miRNA processing // traceable author statement /// 0032924 // activin receptor signaling pathway // inferred from mutant phenotype /// 0035265 // organ growth // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from sequence or structural similarity /// 0038092 // nodal signaling pathway // inferred from mutant phenotype /// 0045165 // cell fate commitment // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0048340 // paraxial mesoderm morphogenesis // inferred from sequence or structural similarity /// 0048589 // developmental growth // inferred from electronic annotation /// 0048617 // embryonic foregut morphogenesis // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0051098 // regulation of binding // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060039 // pericardium development // inferred from electronic annotation /// 0070723 // response to cholesterol // inferred from direct assay /// 1900224 // positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0032444 // activin responsive factor complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0071141 // SMAD protein complex // inferred from direct assay /// 0071144 // SMAD2-SMAD3 protein complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005160 // transforming growth factor beta receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019902 // phosphatase binding // inferred from physical interaction /// 0030618 // transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0034713 // type I transforming growth factor beta receptor binding // inferred from physical interaction /// 0035326 // enhancer binding // inferred by curator /// 0046332 // SMAD binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070410 // co-SMAD binding // inferred from physical interaction /// 0070411 // I-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction </td> <td> -146.38 </td> <td> 288.56 </td> <td> -7.03 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202594_at </td> <td> 202594_at </td> <td> NM_015344 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015344.1 /DEF=Homo sapiens MY047 protein (MY047), mRNA. /FEA=mRNA /GEN=MY047 /PROD=MY047 protein /DB_XREF=gi:7662509 /UG=Hs.11000 leptin receptor overlapping transcript-like 1 /FL=gb:BC000642.1 gb:AF063605.1 gb:AF161461.1 gb:NM_015344.1 </td> <td> NM_015344 </td> <td> leptin receptor overlapping transcript-like 1 </td> <td> LEPROTL1 </td> <td> 23484 </td> <td> NM_001128208 /// NM_015344 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 82.95 </td> <td> 166.18 </td> <td> 7.02 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218099_at </td> <td> 218099_at </td> <td> NM_018469 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018469.1 /DEF=Homo sapiens uncharacterized hypothalamus protein HT008 (HT008), mRNA.  /FEA=mRNA /GEN=HT008 /PROD=uncharacterized hypothalamus protein HT008 /DB_XREF=gi:8923803 /UG=Hs.16206 uncharacterized hypothalamus protein HT008 /FL=gb:AF220182.1 gb:NM_018469.1 </td> <td> NM_018469 </td> <td> testis expressed 2 </td> <td> TEX2 </td> <td> 55852 </td> <td> NM_001288732 /// NM_001288733 /// NM_018469 /// XM_005257507 </td> <td> 0006665 // sphingolipid metabolic process // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0021859 // pyramidal neuron differentiation // inferred from electronic annotation </td> <td> 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement </td> <td> 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> 87.00 </td> <td> 103.17 </td> <td> 7.01 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218541_s_at </td> <td> 218541_s_at </td> <td> NM_020130 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020130.1 /DEF=Homo sapiens chromosome 8 open reading frame 4 (C8ORF4), mRNA. /FEA=mRNA /GEN=C8ORF4 /PROD=chromosome 8 open reading frame 4 /DB_XREF=gi:9910147 /UG=Hs.283683 chromosome 8 open reading frame 4 /FL=gb:AF268037.1 gb:NM_020130.1 </td> <td> NM_020130 </td> <td> chromosome 8 open reading frame 4 </td> <td> C8orf4 </td> <td> 56892 </td> <td> NM_020130 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation </td> <td>  </td> <td>  </td> <td> -86.93 </td> <td> 70.06 </td> <td> -7.01 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 205967_at </td> <td> 205967_at </td> <td> NM_003542 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003542.2 /DEF=Homo sapiens H4 histone family, member G (H4FG), mRNA. /FEA=mRNA /GEN=H4FG /PROD=H4 histone family, member G /DB_XREF=gi:5579465 /UG=Hs.46423 H4 histone family, member G /FL=gb:NM_003542.2 </td> <td> NM_003542 </td> <td> histone cluster 1, H4a /// histone cluster 1, H4b /// histone cluster 1, H4c /// histone cluster 1, H4d /// histone cluster 1, H4e /// histone cluster 1, H4f /// histone cluster 1, H4h /// histone cluster 1, H4i /// histone cluster 1, H4j /// histone cluster 1, H4k /// histone cluster 1, H4l /// histone cluster 2, H4a /// histone cluster 2, H4b /// histone cluster 4, H4 </td> <td> HIST1H4A /// HIST1H4B /// HIST1H4C /// HIST1H4D /// HIST1H4E /// HIST1H4F /// HIST1H4H /// HIST1H4I /// HIST1H4J /// HIST1H4K /// HIST1H4L /// HIST2H4A /// HIST2H4B /// HIST4H4 </td> <td> 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370 /// 121504 /// 554313 </td> <td> NM_001034077 /// NM_003495 /// NM_003538 /// NM_003539 /// NM_003540 /// NM_003541 /// NM_003542 /// NM_003543 /// NM_003544 /// NM_003545 /// NM_003546 /// NM_003548 /// NM_021968 /// NM_175054 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006325 // chromatin organization // traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006335 // DNA replication-dependent nucleosome assembly // inferred from direct assay /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0006352 // DNA-templated transcription, initiation // inferred from electronic annotation /// 0034080 // centromere-specific nucleosome assembly // traceable author statement /// 0035574 // histone H4-K20 demethylation // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement </td> <td> 0000228 // nuclear chromosome // inferred from direct assay /// 0000786 // nucleosome // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0035575 // histone demethylase activity (H4-K20 specific) // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -107.57 </td> <td> 228.96 </td> <td> -7.01 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209377_s_at </td> <td> 209377_s_at </td> <td> AF274949 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF274949.1 /DEF=Homo sapiens PNAS-24 mRNA, complete cds. /FEA=mRNA /PROD=PNAS-24 /DB_XREF=gi:12751062 /UG=Hs.77558 thyroid hormone receptor interactor 7 /FL=gb:AF274949.1 </td> <td> AF274949 </td> <td> high mobility group nucleosomal binding domain 3 </td> <td> HMGN3 </td> <td> 9324 </td> <td> NM_001201362 /// NM_001201363 /// NM_004242 /// NM_138730 /// XM_005248768 /// XM_005248769 /// XM_006715604 </td> <td> 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0061178 // regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // non-traceable author statement </td> <td> 338.45 </td> <td> 610.73 </td> <td> 7.00 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218627_at </td> <td> 218627_at </td> <td> NM_018370 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018370.1 /DEF=Homo sapiens hypothetical protein FLJ11259 (FLJ11259), mRNA. /FEA=mRNA /GEN=FLJ11259 /PROD=hypothetical protein FLJ11259 /DB_XREF=gi:8922957 /UG=Hs.184465 hypothetical protein FLJ11259 /FL=gb:NM_018370.1 </td> <td> NM_018370 </td> <td> DNA-damage regulated autophagy modulator 1 </td> <td> DRAM1 </td> <td> 55332 </td> <td> NM_018370 /// XM_005269004 /// XM_005269005 </td> <td> 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0030262 // apoptotic nuclear changes // inferred from direct assay /// 0097194 // execution phase of apoptosis // inferred by curator </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -140.68 </td> <td> 273.49 </td> <td> -7.00 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 211727_s_at </td> <td> 211727_s_at </td> <td> BC005895 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005895.1 /DEF=Homo sapiens, COX11 (yeast) homolog, cytochrome c oxidase assembly protein, clone MGC:14469, mRNA, complete cds.  /FEA=mRNA /PROD=COX11 (yeast) homolog, cytochrome c oxidaseassembly protein /DB_XREF=gi:13543474 /FL=gb:BC005895.1 </td> <td> BC005895 </td> <td> cytochrome c oxidase assembly homolog 11 (yeast) </td> <td> COX11 </td> <td> 1353 </td> <td> NM_001162861 /// NM_001162862 /// NM_004375 /// NR_027941 /// NR_027942 /// XM_006721704 /// XM_006721705 </td> <td> 0007585 // respiratory gaseous exchange // traceable author statement /// 0008535 // respiratory chain complex IV assembly // traceable author statement /// 0033132 // negative regulation of glucokinase activity // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004129 // cytochrome-c oxidase activity // traceable author statement /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement </td> <td> 98.50 </td> <td> 149.60 </td> <td> 7.00 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 207941_s_at </td> <td> 207941_s_at </td> <td> NM_004902 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004902.1 /DEF=Homo sapiens splicing factor (CC1.3) (CC1.3), mRNA. /FEA=mRNA /GEN=CC1.3 /PROD=splicing factor (CC1.3) /DB_XREF=gi:4757925 /UG=Hs.145696 splicing factor (CC1.3) /FL=gb:L10910.1 gb:NM_004902.1 </td> <td> NM_004902 </td> <td> RNA binding motif protein 39 </td> <td> RBM39 </td> <td> 9584 </td> <td> NM_001242599 /// NM_001242600 /// NM_004902 /// NM_184234 /// NM_184237 /// NM_184241 /// NM_184244 /// NR_040722 /// NR_040723 /// NR_040724 /// XM_006723890 /// XM_006723891 /// XM_006723892 /// XM_006723893 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 125.57 </td> <td> 350.99 </td> <td> 6.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201818_at </td> <td> 201818_at </td> <td> NM_024830 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024830.1 /DEF=Homo sapiens hypothetical protein FLJ12443 (FLJ12443), mRNA. /FEA=mRNA /GEN=FLJ12443 /PROD=hypothetical protein FLJ12443 /DB_XREF=gi:13376233 /UG=Hs.179882 hypothetical protein FLJ12443 /FL=gb:NM_024830.1 </td> <td> NM_024830 </td> <td> lysophosphatidylcholine acyltransferase 1 </td> <td> LPCAT1 </td> <td> 79888 </td> <td> NM_024830 /// XM_005248373 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006654 // phosphatidic acid biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from sequence or structural similarity /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0036148 // phosphatidylglycerol acyl-chain remodeling // traceable author statement /// 0036151 // phosphatidylcholine acyl-chain remodeling // inferred from direct assay /// 0036151 // phosphatidylcholine acyl-chain remodeling // traceable author statement /// 0043129 // surfactant homeostasis // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 2001246 // negative regulation of phosphatidylcholine biosynthetic process // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005811 // lipid particle // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047159 // 1-alkenylglycerophosphocholine O-acyltransferase activity // inferred from electronic annotation /// 0047184 // 1-acylglycerophosphocholine O-acyltransferase activity // inferred from direct assay /// 0047184 // 1-acylglycerophosphocholine O-acyltransferase activity // inferred from sequence or structural similarity /// 0047191 // 1-alkylglycerophosphocholine O-acyltransferase activity // inferred from electronic annotation /// 0047192 // 1-alkylglycerophosphocholine O-acetyltransferase activity // inferred from electronic annotation </td> <td> 75.60 </td> <td> 84.05 </td> <td> 6.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209218_at </td> <td> 209218_at </td> <td> AF098865 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF098865.1 /DEF=Homo sapiens squalene epoxidase (ERG1) mRNA, complete cds. /FEA=mRNA /GEN=ERG1 /PROD=squalene epoxidase /DB_XREF=gi:4204674 /UG=Hs.71465 squalene epoxidase /FL=gb:D78130.1 gb:AF098865.1 gb:NM_003129.2 </td> <td> AF098865 </td> <td> squalene epoxidase </td> <td> SQLE </td> <td> 6713 </td> <td> NM_003129 </td> <td> 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // non-traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // non-traceable author statement </td> <td> 0004497 // monooxygenase activity // inferred from electronic annotation /// 0004506 // squalene monooxygenase activity // non-traceable author statement /// 0004506 // squalene monooxygenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation </td> <td> 240.80 </td> <td> 276.27 </td> <td> 6.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 206138_s_at </td> <td> 206138_s_at </td> <td> NM_002651 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002651.1 /DEF=Homo sapiens phosphatidylinositol 4-kinase, catalytic, beta polypeptide (PIK4CB), mRNA.  /FEA=mRNA /GEN=PIK4CB /PROD=phosphatidylinositol 4-kinase, catalytic, betapolypeptide /DB_XREF=gi:4505808 /UG=Hs.154846 phosphatidylinositol 4-kinase, catalytic, beta polypeptide /FL=gb:AB005910.1 gb:NM_002651.1 </td> <td> NM_002651 </td> <td> phosphatidylinositol 4-kinase, catalytic, beta </td> <td> PI4KB </td> <td> 5298 </td> <td> NM_001198773 /// NM_001198774 /// NM_001198775 /// NM_002651 /// XM_005245261 /// XM_005245262 /// XM_005245263 /// XM_005245264 /// XM_005245265 /// XM_006711385 </td> <td> 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030867 // rough endoplasmic reticulum membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004430 // 1-phosphatidylinositol 4-kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation </td> <td> 113.10 </td> <td> 142.10 </td> <td> 6.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 206855_s_at </td> <td> 206855_s_at </td> <td> NM_003773 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003773.1 /DEF=Homo sapiens hyaluronoglucosaminidase 2 (HYAL2), mRNA. /FEA=mRNA /GEN=HYAL2 /PROD=hyaluronoglucosaminidase 2 /DB_XREF=gi:4504550 /UG=Hs.76873 hyaluronoglucosaminidase 2 /FL=gb:U09577.1 gb:NM_003773.1 </td> <td> NM_003773 </td> <td> hyaluronoglucosaminidase 2 </td> <td> HYAL2 </td> <td> 8692 </td> <td> NM_003773 /// NM_033158 /// XM_005265524 /// XM_005265525 </td> <td> 0000302 // response to reactive oxygen species // inferred from direct assay /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0002244 // hematopoietic progenitor cell differentiation // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006027 // glycosaminoglycan catabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0010764 // negative regulation of fibroblast migration // inferred from direct assay /// 0019064 // fusion of virus membrane with host plasma membrane // inferred from direct assay /// 0019087 // transformation of host cell by virus // inferred from direct assay /// 0019087 // transformation of host cell by virus // inferred from sequence or structural similarity /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030212 // hyaluronan metabolic process // traceable author statement /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0030214 // hyaluronan catabolic process // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0035810 // positive regulation of urine volume // inferred from sequence or structural similarity /// 0042117 // monocyte activation // inferred from direct assay /// 0042307 // positive regulation of protein import into nucleus // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046677 // response to antibiotic // inferred from expression pattern /// 0046718 // viral entry into host cell // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from direct assay /// 0051216 // cartilage development // inferred from expression pattern /// 0051607 // defense response to virus // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling // inferred from direct assay /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation /// 0061099 // negative regulation of protein tyrosine kinase activity // inferred from direct assay /// 0070295 // renal water absorption // inferred from sequence or structural similarity /// 0071347 // cellular response to interleukin-1 // inferred from direct assay /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0071493 // cellular response to UV-B // inferred from direct assay /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from direct assay /// 2000484 // positive regulation of interleukin-8 secretion // inferred from direct assay /// 2000778 // positive regulation of interleukin-6 secretion // inferred from direct assay /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from sequence or structural similarity </td> <td> 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from direct assay /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0031362 // anchored component of external side of plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0046658 // anchored component of plasma membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004415 // hyalurononglucosaminidase activity // inferred from direct assay /// 0004415 // hyalurononglucosaminidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005540 // hyaluronic acid binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0030294 // receptor signaling protein tyrosine kinase inhibitor activity // inferred from direct assay /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0033906 // hyaluronoglucuronidase activity // inferred from direct assay /// 0050431 // transforming growth factor beta binding // inferred from sequence or structural similarity </td> <td> 221.47 </td> <td> 433.11 </td> <td> 6.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 212048_s_at </td> <td> 212048_s_at </td> <td> AW245400 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW245400 /FEA=EST /DB_XREF=gi:6588393 /DB_XREF=est:2822751.3prime /CLONE=IMAGE:2822751 /UG=Hs.239307 tyrosyl-tRNA synthetase </td> <td> AW245400 </td> <td> tyrosyl-tRNA synthetase </td> <td> YARS </td> <td> 8565 </td> <td> NM_003680 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006437 // tyrosyl-tRNA aminoacylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004831 // tyrosine-tRNA ligase activity // traceable author statement /// 0004871 // signal transducer activity // non-traceable author statement /// 0005153 // interleukin-8 receptor binding // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -403.00 </td> <td> 581.27 </td> <td> -6.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 213094_at </td> <td> 213094_at </td> <td> AL033377 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL033377 /DEF=Human DNA sequence from clone 287G14 on chromosome 6q23.1-24.3. Contains a novel seven transmembrane domain protein gene, and an exon similar to parts of BMP and Tolloid genes. Contains ESTs, an STS and GSSs /FEA=mRNA_3 /DB_XREF=gi:4826462 /UG=Hs.44197 hypothetical protein DKFZp564D0462 </td> <td> AL033377 </td> <td> G protein-coupled receptor 126 </td> <td> GPR126 </td> <td> 57211 </td> <td> NM_001032394 /// NM_001032395 /// NM_020455 /// NM_198569 /// XM_005267061 /// XM_006715516 /// XM_006715517 /// XM_006715518 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation </td> <td> 149.78 </td> <td> 236.39 </td> <td> 6.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 33304_at </td> <td> 33304_at </td> <td> U88964 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. U88964:Human HEM45 mRNA, complete cds /cds=(37,582) /gb=U88964 /gi=2062679 /ug=Hs.183487 /len=701 </td> <td> U88964 </td> <td> interferon stimulated exonuclease gene 20kDa </td> <td> ISG20 </td> <td> 3669 </td> <td> NM_002201 /// XM_005254899 /// XM_005254900 /// XM_006720488 /// XM_006720489 /// XM_006720490 </td> <td> 0000738 // DNA catabolic process, exonucleolytic // inferred from direct assay /// 0002376 // immune system process // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006401 // RNA catabolic process // inferred from direct assay /// 0008283 // cell proliferation // traceable author statement /// 0009615 // response to virus // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0045071 // negative regulation of viral genome replication // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from mutant phenotype /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090503 // RNA phosphodiester bond hydrolysis, exonucleolytic // inferred from direct assay /// 0090503 // RNA phosphodiester bond hydrolysis, exonucleolytic // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0016605 // PML body // inferred from direct assay </td> <td> 0000175 // 3'-5'-exoribonuclease activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from mutant phenotype /// 0008310 // single-stranded DNA 3'-5' exodeoxyribonuclease activity // inferred from direct assay /// 0008859 // exoribonuclease II activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030619 // U1 snRNA binding // inferred from direct assay /// 0030620 // U2 snRNA binding // inferred from direct assay /// 0034511 // U3 snoRNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -72.43 </td> <td> 77.54 </td> <td> -6.97 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201889_at </td> <td> 201889_at </td> <td> NM_014888 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014888.1 /DEF=Homo sapiens predicted osteoblast protein (GS3786), mRNA. /FEA=mRNA /GEN=GS3786 /PROD=predicted osteoblast protein /DB_XREF=gi:7661713 /UG=Hs.29882 predicted osteoblast protein /FL=gb:D87120.1 gb:NM_014888.1 </td> <td> NM_014888 </td> <td> family with sequence similarity 3, member C </td> <td> FAM3C </td> <td> 10447 </td> <td> NM_001040020 /// NM_014888 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005125 // cytokine activity // non-traceable author statement </td> <td> 153.33 </td> <td> 213.39 </td> <td> 6.97 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 220987_s_at </td> <td> 220987_s_at </td> <td> NM_030952 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030952.1 /DEF=Homo sapiens hypothetical protein DKFZp434J037 (DKFZP434J037), mRNA.  /FEA=mRNA /GEN=DKFZP434J037 /PROD=hypothetical protein DKFZp434J037 /DB_XREF=gi:13569921 /FL=gb:NM_030952.1 </td> <td> NM_030952 </td> <td> A kinase (PRKA) interacting protein 1 /// NUAK family, SNF1-like kinase, 2 </td> <td> AKIP1 /// NUAK2 </td> <td> 56672 /// 81788 </td> <td> NM_001206645 /// NM_001206646 /// NM_001206647 /// NM_001206648 /// NM_020642 /// NM_030952 /// NM_182901 /// NR_045417 /// NR_045418 /// XM_005245515 /// XM_006718264 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0034446 // substrate adhesion-dependent cell spreading // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -88.67 </td> <td> 87.86 </td> <td> -6.96 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 218330_s_at </td> <td> 218330_s_at </td> <td> NM_018162 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018162.1 /DEF=Homo sapiens hypothetical protein FLJ10633 (FLJ10633), mRNA. /FEA=mRNA /GEN=FLJ10633 /PROD=hypothetical protein FLJ10633 /DB_XREF=gi:9506612 /UG=Hs.23467 hypothetical protein FLJ10633 /FL=gb:NM_018162.1 </td> <td> NM_018162 </td> <td> neuron navigator 2 </td> <td> NAV2 </td> <td> 89797 </td> <td> NM_001111018 /// NM_001111019 /// NM_001244963 /// NM_145117 /// NM_182964 /// XM_005253214 /// XM_006718364 /// XM_006718365 /// XM_006718366 /// XM_006718367 /// XM_006718368 /// XM_006718369 </td> <td> 0003025 // regulation of systemic arterial blood pressure by baroreceptor feedback // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0021554 // optic nerve development // inferred from electronic annotation /// 0021563 // glossopharyngeal nerve development // inferred from electronic annotation /// 0021564 // vagus nerve development // inferred from electronic annotation </td> <td> 0005614 // interstitial matrix // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> -276.80 </td> <td> 305.45 </td> <td> -6.96 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 201194_at </td> <td> 201194_at </td> <td> NM_003009 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003009.1 /DEF=Homo sapiens selenoprotein W, 1 (SEPW1), mRNA. /FEA=mRNA /GEN=SEPW1 /PROD=selenoprotein W, 1 /DB_XREF=gi:4506886 /UG=Hs.14231 selenoprotein W, 1 /FL=gb:U67171.1 gb:AF015283.1 gb:NM_003009.1 </td> <td> NM_003009 </td> <td> selenoprotein W, 1 </td> <td> SEPW1 </td> <td> 6415 </td> <td> NM_003009 </td> <td> 0045454 // cell redox homeostasis // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0008430 // selenium binding // inferred from electronic annotation /// 0016209 // antioxidant activity // inferred from electronic annotation </td> <td> 110.10 </td> <td> 262.18 </td> <td> 6.96 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 217798_at </td> <td> 217798_at </td> <td> AI123426 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI123426 /FEA=EST /DB_XREF=gi:3539192 /DB_XREF=est:qa49c09.x1 /CLONE=IMAGE:1690096 /UG=Hs.239720 CCR4-NOT transcription complex, subunit 2 /FL=gb:AF113226.1 gb:AF180473.1 gb:NM_014515.1 </td> <td> AI123426 </td> <td> CCR4-NOT transcription complex, subunit 2 </td> <td> CNOT2 </td> <td> 4848 </td> <td> NM_001199302 /// NM_001199303 /// NM_014515 /// NR_037615 /// XM_006719429 /// XM_006719430 /// XM_006719431 /// XM_006719432 /// XM_006719433 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0001829 // trophectodermal cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010606 // positive regulation of cytoplasmic mRNA processing body assembly // inferred from mutant phenotype /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from mutant phenotype /// 0090503 // RNA phosphodiester bond hydrolysis, exonucleolytic // inferred from mutant phenotype /// 2000036 // regulation of stem cell maintenance // inferred from mutant phenotype </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030014 // CCR4-NOT complex // inferred from direct assay </td> <td> 0001104 // RNA polymerase II transcription cofactor activity // traceable author statement /// 0001226 // RNA polymerase II transcription corepressor binding // inferred from direct assay /// 0004535 // poly(A)-specific ribonuclease activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction </td> <td> -96.93 </td> <td> 258.36 </td> <td> -6.95 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203723_at </td> <td> 203723_at </td> <td> NM_002221 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002221.1 /DEF=Homo sapiens inositol 1,4,5-trisphosphate 3-kinase B (ITPKB), mRNA. /FEA=mRNA /GEN=ITPKB /PROD=1D-myo-inositol-trisphosphate 3-kinase B /DB_XREF=gi:4504790 /UG=Hs.78877 inositol 1,4,5-trisphosphate 3-kinase B /FL=gb:NM_002221.1 </td> <td> NM_002221 </td> <td> inositol-trisphosphate 3-kinase B </td> <td> ITPKB </td> <td> 3707 </td> <td> NM_002221 /// XM_005273120 </td> <td> 0000165 // MAPK cascade // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045059 // positive thymic T cell selection // inferred from electronic annotation /// 0045061 // thymic T cell selection // inferred from electronic annotation /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046638 // positive regulation of alpha-beta T cell differentiation // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008440 // inositol-1,4,5-trisphosphate 3-kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -106.43 </td> <td> 162.44 </td> <td> -6.95 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 217739_s_at </td> <td> 217739_s_at </td> <td> NM_005746 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005746.1 /DEF=Homo sapiens pre-B-cell colony-enhancing factor (PBEF), mRNA. /FEA=mRNA /GEN=PBEF /PROD=pre-B-cell colony-enhancing factor /DB_XREF=gi:5031976 /UG=Hs.239138 pre-B-cell colony-enhancing factor /FL=gb:U02020.1 gb:NM_005746.1 </td> <td> NM_005746 </td> <td> nicotinamide phosphoribosyltransferase </td> <td> NAMPT </td> <td> 10135 </td> <td> NM_005746 /// NM_182790 /// XM_005250100 </td> <td> 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006769 // nicotinamide metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0009435 // NAD biosynthetic process // inferred from electronic annotation /// 0019363 // pyridine nucleotide biosynthetic process // inferred from electronic annotation /// 0019674 // NAD metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051770 // positive regulation of nitric-oxide synthase biosynthetic process // inferred from direct assay /// 0060612 // adipose tissue development // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004514 // nicotinate-nucleotide diphosphorylase (carboxylating) activity // inferred from electronic annotation /// 0004516 // nicotinate phosphoribosyltransferase activity // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0047280 // nicotinamide phosphoribosyltransferase activity // inferred from electronic annotation </td> <td> -205.62 </td> <td> 463.79 </td> <td> -6.94 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 208841_s_at </td> <td> 208841_s_at </td> <td> AB014560 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB014560.1 /DEF=Homo sapiens mRNA for KIAA0660 protein, complete cds. /FEA=mRNA /GEN=KIAA0660 /PROD=KIAA0660 protein /DB_XREF=gi:3327133 /UG=Hs.6727 Ras-GTPase activating protein SH3 domain-binding protein 2 /FL=gb:AB014560.1 </td> <td> AB014560 </td> <td> GTPase activating protein (SH3 domain) binding protein 2 </td> <td> G3BP2 </td> <td> 9908 </td> <td> NM_012297 /// NM_203504 /// NM_203505 /// XM_005263382 /// XM_005263383 /// XM_005263384 /// XM_005263385 /// XM_005263386 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007253 // cytoplasmic sequestering of NF-kappaB // non-traceable author statement /// 0007265 // Ras protein signal transduction // non-traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 134.55 </td> <td> 388.43 </td> <td> 6.93 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 200755_s_at </td> <td> 200755_s_at </td> <td> BF939365 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF939365 /FEA=EST /DB_XREF=gi:12356685 /DB_XREF=est:nad87h04.x1 /CLONE=IMAGE:3410551 /UG=Hs.7753 calumenin /FL=gb:U67280.1 gb:AF013759.1 gb:NM_001219.2 </td> <td> BF939365 </td> <td> calumenin </td> <td> CALU </td> <td> 813 </td> <td> NM_001130674 /// NM_001199671 /// NM_001199672 /// NM_001199673 /// NM_001199674 /// NM_001219 /// NR_074086 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0033018 // sarcoplasmic reticulum lumen // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 201.03 </td> <td> 326.91 </td> <td> 6.93 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204905_s_at </td> <td> 204905_s_at </td> <td> NM_004280 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004280.1 /DEF=Homo sapiens eukaryotic translation elongation factor 1 epsilon 1 (EEF1E1), mRNA.  /FEA=mRNA /GEN=EEF1E1 /PROD=eukaryotic translation elongation factor 1epsilon 1 /DB_XREF=gi:4758861 /UG=Hs.298581 eukaryotic translation elongation factor 1 epsilon 1 /FL=gb:BC005291.1 gb:AB011079.1 gb:AF054186.1 gb:NM_004280.1 </td> <td> NM_004280 </td> <td> eukaryotic translation elongation factor 1 epsilon 1 </td> <td> EEF1E1 </td> <td> 9521 </td> <td> NM_001135650 /// NM_004280 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043517 // positive regulation of DNA damage response, signal transduction by p53 class mediator // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 103.13 </td> <td> 236.09 </td> <td> 6.93 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 208763_s_at </td> <td> 208763_s_at </td> <td> AL110191 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL110191.1 /DEF=Homo sapiens mRNA; cDNA DKFZp566A093 (from clone DKFZp566A093); complete cds.  /FEA=mRNA /GEN=DKFZp566A093 /PROD=hypothetical protein /DB_XREF=gi:5817105 /UG=Hs.75450 delta sleep inducing peptide, immunoreactor /FL=gb:AF228339.1 gb:AF153603.1 gb:AL110191.1 gb:AF183393.1 </td> <td> AL110191 </td> <td> TSC22 domain family, member 3 </td> <td> TSC22D3 </td> <td> 1831 </td> <td> NM_001015881 /// NM_004089 /// NM_198057 /// XM_005262098 /// XM_005262099 /// XM_005262100 /// XM_005262101 /// XM_005262102 /// XM_005262103 /// XM_006724629 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0048642 // negative regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0070236 // negative regulation of activation-induced cell death of T cells // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043426 // MRF binding // inferred from electronic annotation </td> <td> -114.27 </td> <td> 139.44 </td> <td> -6.93 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204033_at </td> <td> 204033_at </td> <td> NM_004237 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004237.1 /DEF=Homo sapiens thyroid hormone receptor interactor 13 (TRIP13), mRNA. /FEA=mRNA /GEN=TRIP13 /PROD=thyroid hormone receptor interactor 13 /DB_XREF=gi:11321606 /UG=Hs.6566 thyroid hormone receptor interactor 13 /FL=gb:NM_004237.1 gb:BC000404.1 gb:U96131.1 </td> <td> NM_004237 </td> <td> thyroid hormone receptor interactor 13 </td> <td> TRIP13 </td> <td> 9319 </td> <td> NM_001166260 /// NM_004237 /// XM_005248388 </td> <td> 0001556 // oocyte maturation // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0007130 // synaptonemal complex assembly // inferred from sequence or structural similarity /// 0007131 // reciprocal meiotic recombination // inferred from sequence or structural similarity /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007144 // female meiosis I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007286 // spermatid development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048477 // oogenesis // inferred from sequence or structural similarity /// 2001141 // regulation of RNA biosynthetic process // traceable author statement </td> <td> 0001673 // male germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> 85.53 </td> <td> 142.61 </td> <td> 6.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202539_s_at </td> <td> 202539_s_at </td> <td> AL518627 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL518627 /FEA=EST /DB_XREF=gi:12782120 /DB_XREF=est:AL518627 /CLONE=CS0DA009YG15 (3 prime) /UG=Hs.11899 3-hydroxy-3-methylglutaryl-Coenzyme A reductase /FL=gb:M11058.1 gb:NM_000859.1 </td> <td> AL518627 </td> <td> 3-hydroxy-3-methylglutaryl-CoA reductase </td> <td> HMGCR </td> <td> 3156 </td> <td> NM_000859 /// NM_001130996 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006743 // ubiquinone metabolic process // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010664 // negative regulation of striated muscle cell apoptotic process // inferred from electronic annotation /// 0010666 // positive regulation of cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0015936 // coenzyme A metabolic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045445 // myoblast differentiation // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045908 // negative regulation of vasodilation // inferred from electronic annotation /// 0048643 // positive regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061045 // negative regulation of wound healing // inferred from electronic annotation /// 0061179 // negative regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation </td> <td> 0005778 // peroxisomal membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004420 // hydroxymethylglutaryl-CoA reductase (NADPH) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008158 // hedgehog receptor activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0042282 // hydroxymethylglutaryl-CoA reductase activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from direct assay /// 0070402 // NADPH binding // inferred from direct assay </td> <td> 79.20 </td> <td> 84.33 </td> <td> 6.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204331_s_at </td> <td> 204331_s_at </td> <td> NM_021107 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021107.1 /DEF=Homo sapiens mitochondrial ribosomal protein S12 (MRPS12), mRNA. /FEA=mRNA /GEN=MRPS12 /PROD=mitochondrial ribosomal protein S12 /DB_XREF=gi:11056055 /UG=Hs.9964 mitochondrial ribosomal protein S12 /FL=gb:NM_021107.1 </td> <td> NM_021107 </td> <td> mitochondrial ribosomal protein S12 </td> <td> MRPS12 </td> <td> 6183 </td> <td> NM_021107 /// NM_033362 /// NM_033363 </td> <td> 0006412 // translation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 69.20 </td> <td> 209.53 </td> <td> 6.91 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 208405_s_at </td> <td> 208405_s_at </td> <td> NM_006016 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006016.1 /DEF=Homo sapiens CD164 antigen, sialomucin (CD164), mRNA. /FEA=mRNA /GEN=CD164 /PROD=CD164 antigen, sialomucin /DB_XREF=gi:5174406 /UG=Hs.43910 CD164 antigen, sialomucin /FL=gb:D14043.1 gb:NM_006016.1 </td> <td> NM_006016 </td> <td> CD164 molecule, sialomucin </td> <td> CD164 </td> <td> 8763 </td> <td> NM_001142401 /// NM_001142402 /// NM_001142403 /// NM_001142404 /// NM_006016 </td> <td> 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007157 // heterophilic cell-cell adhesion // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0030097 // hemopoiesis // non-traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 300.80 </td> <td> 520.20 </td> <td> 6.91 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209897_s_at </td> <td> 209897_s_at </td> <td> AF055585 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF055585.1 /DEF=Homo sapiens neurogenic extracellular slit protein Slit2 mRNA, complete cds.  /FEA=mRNA /PROD=neurogenic extracellular slit protein Slit2 /DB_XREF=gi:4151204 /UG=Hs.29802 slit (Drosophila) homolog 2 /FL=gb:AF055585.1 gb:AF133270.1 </td> <td> AF055585 </td> <td> slit homolog 2 (Drosophila) </td> <td> SLIT2 </td> <td> 9353 </td> <td> NM_001289135 /// NM_001289136 /// NM_004787 /// XM_005248211 /// XM_005248214 /// XM_006713986 </td> <td> 0001656 // metanephros development // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from mutant phenotype /// 0002689 // negative regulation of leukocyte chemotaxis // inferred from direct assay /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // inferred from direct assay /// 0007411 // axon guidance // traceable author statement /// 0008045 // motor neuron axon guidance // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010593 // negative regulation of lamellipodium assembly // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0021834 // chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration // inferred from direct assay /// 0021836 // chemorepulsion involved in postnatal olfactory bulb interneuron migration // inferred from direct assay /// 0021972 // corticospinal neuron axon guidance through spinal cord // inferred from mutant phenotype /// 0022029 // telencephalon cell migration // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030837 // negative regulation of actin filament polymerization // inferred from direct assay /// 0031290 // retinal ganglion cell axon guidance // inferred from direct assay /// 0032870 // cellular response to hormone stimulus // inferred from expression pattern /// 0033563 // dorsal/ventral axon guidance // inferred from electronic annotation /// 0035385 // Roundabout signaling pathway // inferred by curator /// 0035385 // Roundabout signaling pathway // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0043116 // negative regulation of vascular permeability // inferred from direct assay /// 0048754 // branching morphogenesis of an epithelial tube // inferred from direct assay /// 0048754 // branching morphogenesis of an epithelial tube // inferred from mutant phenotype /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0048846 // axon extension involved in axon guidance // inferred from direct assay /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0050919 // negative chemotaxis // inferred from direct assay /// 0050919 // negative chemotaxis // inferred from mutant phenotype /// 0050929 // induction of negative chemotaxis // inferred from direct assay /// 0051058 // negative regulation of small GTPase mediated signal transduction // inferred from direct assay /// 0051414 // response to cortisol // inferred from expression pattern /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation /// 0060763 // mammary duct terminal end bud growth // inferred from electronic annotation /// 0061364 // apoptotic process involved in luteolysis // inferred from expression pattern /// 0070100 // negative regulation of chemokine-mediated signaling pathway // inferred from mutant phenotype /// 0071504 // cellular response to heparin // inferred from direct assay /// 0071672 // negative regulation of smooth muscle cell chemotaxis // inferred from direct assay /// 0071676 // negative regulation of mononuclear cell migration // inferred from direct assay /// 0090024 // negative regulation of neutrophil chemotaxis // inferred from direct assay /// 0090027 // negative regulation of monocyte chemotaxis // inferred from sequence or structural similarity /// 0090260 // negative regulation of retinal ganglion cell axon guidance // inferred from direct assay /// 0090288 // negative regulation of cellular response to growth factor stimulus // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005095 // GTPase inhibitor activity // inferred from direct assay /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043237 // laminin-1 binding // inferred from direct assay /// 0043394 // proteoglycan binding // inferred from physical interaction /// 0045499 // chemorepellent activity // inferred from electronic annotation /// 0048495 // Roundabout binding // inferred from physical interaction </td> <td> -69.62 </td> <td> 129.41 </td> <td> -6.91 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 211937_at </td> <td> 211937_at </td> <td> NM_001417 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_001417.1 /DEF=Homo sapiens eukaryotic translation initiation factor 4B (EIF4B), mRNA.  /FEA=CDS /GEN=EIF4B /PROD=eukaryotic translation initiation factor 4B /DB_XREF=gi:4503532 /UG=Hs.93379 eukaryotic translation initiation factor 4B /FL=gb:NM_001417.1 </td> <td> NM_001417 </td> <td> eukaryotic translation initiation factor 4B </td> <td> EIF4B </td> <td> 1975 </td> <td> NM_001417 /// NM_018507 /// XM_005268709 /// XM_006719274 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -445.77 </td> <td> 877.49 </td> <td> -6.91 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 202286_s_at </td> <td> 202286_s_at </td> <td> J04152 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:J04152 /DEF=Human gastrointestinal tumor-associated antigen GA733-1 protein gene, complete cds, clone 05516 /FEA=mRNA /DB_XREF=gi:182893 /UG=Hs.23582 tumor-associated calcium signal transducer 2 /FL=gb:NM_002353.1 </td> <td> J04152 </td> <td> tumor-associated calcium signal transducer 2 </td> <td> TACSTD2 </td> <td> 4070 </td> <td> NM_002353 </td> <td> 0000320 // re-entry into mitotic cell cycle // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007595 // lactation // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from electronic annotation /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010633 // negative regulation of epithelial cell migration // inferred from sequence or structural similarity /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from electronic annotation /// 0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032026 // response to magnesium ion // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0033327 // Leydig cell differentiation // inferred from electronic annotation /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0033601 // positive regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043627 // response to estrogen // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051497 // negative regulation of stress fiber assembly // inferred from sequence or structural similarity /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway // inferred from electronic annotation /// 0060675 // ureteric bud morphogenesis // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0090191 // negative regulation of branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 1900025 // negative regulation of substrate adhesion-dependent cell spreading // inferred from sequence or structural similarity /// 1900028 // negative regulation of ruffle assembly // inferred from sequence or structural similarity /// 2000045 // regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 2000146 // negative regulation of cell motility // inferred from sequence or structural similarity /// 2000738 // positive regulation of stem cell differentiation // inferred from electronic annotation </td> <td> 0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005923 // tight junction // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004672 // protein kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016538 // cyclin-dependent protein serine/threonine kinase regulator activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> 168.25 </td> <td> 253.97 </td> <td> 6.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 209822_s_at </td> <td> 209822_s_at </td> <td> L22431 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L22431.1 /DEF=Human very low density lipoprotein receptor, complete cds. /FEA=mRNA /PROD=very low density lipoprotein receptor /DB_XREF=gi:437386 /UG=Hs.73729 very low density lipoprotein receptor /FL=gb:D16493.1 gb:L22431.1 gb:NM_003383.1 </td> <td> L22431 </td> <td> very low density lipoprotein receptor </td> <td> VLDLR </td> <td> 7436 </td> <td> NM_001018056 /// NM_003383 /// XM_006716864 /// XM_006716865 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007613 // memory // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0034436 // glycoprotein transport // inferred from direct assay /// 0034447 // very-low-density lipoprotein particle clearance // inferred from direct assay /// 0038026 // reelin-mediated signaling pathway // inferred from sequence or structural similarity /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 1900006 // positive regulation of dendrite development // inferred from sequence or structural similarity </td> <td> 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0034361 // very-low-density lipoprotein particle // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0001948 // glycoprotein binding // inferred from physical interaction /// 0005041 // low-density lipoprotein receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030229 // very-low-density lipoprotein particle receptor activity // inferred from direct assay /// 0034185 // apolipoprotein binding // inferred from direct assay /// 0034185 // apolipoprotein binding // inferred from sequence or structural similarity /// 0034189 // very-low-density lipoprotein particle binding // inferred from direct assay /// 0034437 // glycoprotein transporter activity // inferred from direct assay /// 0038025 // reelin receptor activity // inferred from sequence or structural similarity /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> -57.28 </td> <td> 54.94 </td> <td> -6.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 204386_s_at </td> <td> 204386_s_at </td> <td> BF303597 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF303597 /FEA=EST /DB_XREF=gi:11250218 /DB_XREF=est:601886230F2 /CLONE=IMAGE:4120446 /UG=Hs.182695 hypothetical protein MGC3243 /FL=gb:BC000002.1 gb:NM_024026.1 </td> <td> BF303597 </td> <td> mitochondrial ribosomal protein L57 </td> <td> MRPL57 </td> <td> 78988 </td> <td> NM_024026 </td> <td> 0006412 // translation // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation </td> <td> 133.50 </td> <td> 409.02 </td> <td> 6.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 55872_at </td> <td> 55872_at </td> <td> AI493119 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI493119:qz49h07.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2030269 /clone_end=3' /gb=AI493119 /gi=4394122 /ug=Hs.158654 /len=456 </td> <td> AI493119 </td> <td> zinc finger protein 512B </td> <td> ZNF512B </td> <td> 57473 </td> <td> NM_020713 /// XM_005260226 /// XR_430305 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 172.25 </td> <td> 139.38 </td> <td> 6.89 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 203753_at </td> <td> 203753_at </td> <td> NM_003199 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003199.1 /DEF=Homo sapiens transcription factor 4 (TCF4), mRNA. /FEA=mRNA /GEN=TCF4 /PROD=transcription factor 4, isoform b /DB_XREF=gi:4507398 /UG=Hs.326198 transcription factor 4 /FL=gb:M74719.1 gb:NM_003199.1 </td> <td> NM_003199 </td> <td> transcription factor 4 </td> <td> TCF4 </td> <td> 6925 </td> <td> NM_001083962 /// NM_001243226 /// NM_001243227 /// NM_001243228 /// NM_001243230 /// NM_001243231 /// NM_001243232 /// NM_001243233 /// NM_001243234 /// NM_001243235 /// NM_001243236 /// NM_003199 /// XM_005266739 /// XM_005266741 /// XM_005266743 /// XM_005266744 /// XM_005266745 /// XM_005266746 /// XM_005266747 /// XM_005266749 /// XM_005266750 /// XM_005266752 /// XM_005266754 /// XM_005266755 /// XM_005266761 /// XM_006722529 /// XM_006722530 /// XM_006722531 /// XM_006722532 /// XM_006722533 /// XM_006722534 /// XM_006722535 /// XM_006722536 /// XM_006722537 /// XM_006722538 /// XM_006722539 /// XM_006722540 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006352 // DNA-templated transcription, initiation // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from sequence or structural similarity </td> <td> -107.32 </td> <td> 345.59 </td> <td> -6.88 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.43 </td> </tr>
  <tr> <td> 210513_s_at </td> <td> 210513_s_at </td> <td> AF091352 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF091352.1 /DEF=Homo sapiens vascular permeability factor 148 mRNA, complete cds. /FEA=mRNA /PROD=vascular permeability factor 148 /DB_XREF=gi:5901560 /UG=Hs.73793 vascular endothelial growth factor /FL=gb:M32977.1 gb:AF022375.1 gb:NM_003376.1 gb:AB021221.1 gb:AF091352.1 </td> <td> AF091352 </td> <td> vascular endothelial growth factor A </td> <td> VEGFA </td> <td> 7422 </td> <td> NM_001025366 /// NM_001025367 /// NM_001025368 /// NM_001025369 /// NM_001025370 /// NM_001033756 /// NM_001171622 /// NM_001171623 /// NM_001171624 /// NM_001171625 /// NM_001171626 /// NM_001171627 /// NM_001171628 /// NM_001171629 /// NM_001171630 /// NM_001204384 /// NM_001204385 /// NM_001287044 /// NM_003376 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001525 // angiogenesis // inferred from direct assay /// 0001541 // ovarian follicle development // inferred from sequence or structural similarity /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // traceable author statement /// 0001666 // response to hypoxia // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from sequence or structural similarity /// 0001944 // vasculature development // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0002052 // positive regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0002575 // basophil chemotaxis // inferred from direct assay /// 0002576 // platelet degranulation // traceable author statement /// 0002687 // positive regulation of leukocyte migration // traceable author statement /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003169 // coronary vein morphogenesis // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007498 // mesoderm development // inferred from sequence or structural similarity /// 0007595 // lactation // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008360 // regulation of cell shape // inferred from direct assay /// 0009409 // response to cold // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030212 // hyaluronan metabolic process // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from direct assay /// 0030225 // macrophage differentiation // inferred from direct assay /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030855 // epithelial cell differentiation // inferred from sequence or structural similarity /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0031077 // post-embryonic camera-type eye development // inferred from sequence or structural similarity /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032147 // activation of protein kinase activity // inferred from direct assay /// 0032793 // positive regulation of CREB transcription factor activity // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0035148 // tube formation // inferred from direct assay /// 0035767 // endothelial cell chemotaxis // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0036303 // lymph vessel morphogenesis // inferred from sequence or structural similarity /// 0038033 // positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from direct assay /// 0038091 // positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway // inferred from direct assay /// 0038190 // VEGF-activated neuropilin signaling pathway // inferred from sequence or structural similarity /// 0040007 // growth // inferred from sequence or structural similarity /// 0042088 // T-helper 1 type immune response // inferred from electronic annotation /// 0042462 // eye photoreceptor cell development // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043069 // negative regulation of programmed cell death // inferred from electronic annotation /// 0043117 // positive regulation of vascular permeability // inferred from direct assay /// 0043129 // surfactant homeostasis // inferred from sequence or structural similarity /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045779 // negative regulation of bone resorption // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048469 // cell maturation // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048739 // cardiac muscle fiber development // inferred from sequence or structural similarity /// 0048754 // branching morphogenesis of an epithelial tube // inferred from sequence or structural similarity /// 0048842 // positive regulation of axon extension involved in axon guidance // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050918 // positive chemotaxis // inferred from direct assay /// 0050927 // positive regulation of positive chemotaxis // inferred from direct assay /// 0050930 // induction of positive chemotaxis // inferred from direct assay /// 0050930 // induction of positive chemotaxis // non-traceable author statement /// 0051272 // positive regulation of cellular component movement // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0060319 // primitive erythrocyte differentiation // inferred from sequence or structural similarity /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from sequence or structural similarity /// 0060754 // positive regulation of mast cell chemotaxis // inferred from direct assay /// 0060948 // cardiac vascular smooth muscle cell development // inferred from sequence or structural similarity /// 0060982 // coronary artery morphogenesis // inferred from sequence or structural similarity /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0061419 // positive regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071456 // cellular response to hypoxia // traceable author statement /// 0071542 // dopaminergic neuron differentiation // inferred from sequence or structural similarity /// 0071679 // commissural neuron axon guidance // inferred from sequence or structural similarity /// 0090037 // positive regulation of protein kinase C signaling // inferred from direct assay /// 0090050 // positive regulation of cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0090259 // regulation of retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 1900086 // positive regulation of peptidyl-tyrosine autophosphorylation // inferred from direct assay /// 1900745 // positive regulation of p38MAPK cascade // inferred from direct assay /// 1901492 // positive regulation of lymphangiogenesis // inferred from electronic annotation /// 1901727 // positive regulation of histone deacetylase activity // inferred from direct assay /// 1902336 // positive regulation of retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 1902533 // positive regulation of intracellular signal transduction // inferred from direct assay /// 1902966 // positive regulation of protein localization to early endosome // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation </td> <td> 0001968 // fibronectin binding // inferred from direct assay /// 0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005172 // vascular endothelial growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from sequence or structural similarity /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from mutant phenotype /// 0038191 // neuropilin binding // inferred from physical interaction /// 0042056 // chemoattractant activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0043183 // vascular endothelial growth factor receptor 1 binding // inferred from physical interaction /// 0043184 // vascular endothelial growth factor receptor 2 binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0048018 // receptor agonist activity // inferred from physical interaction /// 0050840 // extracellular matrix binding // inferred by curator </td> <td> -113.85 </td> <td> 106.58 </td> <td> -6.86 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208370_s_at </td> <td> 208370_s_at </td> <td> NM_004414 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004414.2 /DEF=Homo sapiens Down syndrome critical region gene 1 (DSCR1), mRNA. /FEA=mRNA /GEN=DSCR1 /PROD=Down syndrome critical region protein 1 /DB_XREF=gi:7657042 /UG=Hs.184222 Down syndrome critical region gene 1 /FL=gb:U28833.2 gb:NM_004414.2 </td> <td> NM_004414 </td> <td> regulator of calcineurin 1 </td> <td> RCAN1 </td> <td> 1827 </td> <td> NM_001285389 /// NM_001285391 /// NM_001285392 /// NM_001285393 /// NM_004414 /// NM_203417 /// NM_203418 /// XM_005260929 /// XM_005260930 </td> <td> 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0043627 // response to estrogen // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -186.22 </td> <td> 219.74 </td> <td> -6.86 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 219634_at </td> <td> 219634_at </td> <td> NM_018413 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018413.1 /DEF=Homo sapiens chondroitin 4-sulfotransferase (C4ST), mRNA. /FEA=mRNA /GEN=C4ST /PROD=chondroitin 4-sulfotransferase /DB_XREF=gi:8923757 /UG=Hs.287402 chondroitin 4-sulfotransferase /FL=gb:AB042326.1 gb:NM_018413.1 gb:AF239820.1 </td> <td> NM_018413 </td> <td> carbohydrate (chondroitin 4) sulfotransferase 11 </td> <td> CHST11 </td> <td> 50515 </td> <td> NM_001173982 /// NM_018413 </td> <td> 0002063 // chondrocyte development // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // inferred from direct assay /// 0030206 // chondroitin sulfate biosynthetic process // traceable author statement /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0033037 // polysaccharide localization // inferred from electronic annotation /// 0036342 // post-anal tail morphogenesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048589 // developmental growth // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement </td> <td> 0001537 // N-acetylgalactosamine 4-O-sulfotransferase activity // inferred from direct assay /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from direct assay /// 0050659 // N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity // inferred from electronic annotation </td> <td> -58.20 </td> <td> 81.85 </td> <td> -6.86 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212288_at </td> <td> 212288_at </td> <td> AB011126 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB011126.1 /DEF=Homo sapiens mRNA for KIAA0554 protein, partial cds. /FEA=mRNA /GEN=KIAA0554 /PROD=KIAA0554 protein /DB_XREF=gi:3043631 /UG=Hs.301763 KIAA0554 protein </td> <td> AB011126 </td> <td> formin binding protein 1 </td> <td> FNBP1 </td> <td> 23048 </td> <td> NM_015033 /// XM_005251815 /// XM_005251816 /// XM_005251817 /// XM_005251818 /// XM_005251819 /// XM_005251820 /// XM_005251821 /// XM_005251822 /// XM_005251823 /// XM_005251824 /// XM_005251825 /// XM_005251826 /// XM_005251827 /// XM_005251828 /// XM_005251829 /// XM_005251830 /// XM_005251831 /// XM_005251832 /// XM_005251833 /// XM_005251834 /// XM_006717016 /// XM_006717017 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -213.70 </td> <td> 217.00 </td> <td> -6.86 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209744_x_at </td> <td> 209744_x_at </td> <td> AB056663 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB056663.2 /DEF=Homo sapiens mRNA for ubiquitin protein ligase Itch, complete cds. /FEA=mRNA /GEN=Itch /PROD=ubiquitin protein ligase Itch /DB_XREF=gi:13442821 /UG=Hs.98074 atrophin-1 interacting protein 4 /FL=gb:AB056663.2 </td> <td> AB056663 </td> <td> itchy E3 ubiquitin protein ligase </td> <td> ITCH </td> <td> 83737 </td> <td> NM_001257137 /// NM_001257138 /// NM_031483 /// XM_005260570 /// XM_006723881 /// XM_006723882 /// XR_244153 /// XR_430315 </td> <td> 0000209 // protein polyubiquitination // inferred from electronic annotation /// 0001558 // regulation of cell growth // non-traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0002669 // positive regulation of T cell anergy // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0035519 // protein K29-linked ubiquitination // inferred from direct assay /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from sequence or structural similarity /// 0046642 // negative regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0046718 // viral entry into host cell // traceable author statement /// 0050687 // negative regulation of defense response to virus // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0090085 // regulation of protein deubiquitination // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // not recorded /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // non-traceable author statement /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0043021 // ribonucleoprotein complex binding // inferred from physical interaction /// 0045236 // CXCR chemokine receptor binding // inferred from physical interaction </td> <td> -124.43 </td> <td> 193.66 </td> <td> -6.86 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213035_at </td> <td> 213035_at </td> <td> AI081194 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI081194 /FEA=EST /DB_XREF=gi:3417986 /DB_XREF=est:ox76a08.x1 /CLONE=IMAGE:1662230 /UG=Hs.32556 KIAA0379 protein </td> <td> AI081194 </td> <td> ankyrin repeat domain 28 </td> <td> ANKRD28 </td> <td> 23243 </td> <td> NM_001195098 /// NM_001195099 /// NM_015199 /// XM_005264996 /// XM_005264997 /// XM_005264998 /// XM_006713074 /// XM_006713075 /// XM_006713076 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 60.52 </td> <td> 64.59 </td> <td> 6.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213038_at </td> <td> 213038_at </td> <td> AL031602 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL031602 /DEF=Human DNA sequence from clone RP5-1174N9 on chromosome 1p34.1-35.3. Contains the gene for a novel protein with IBR domain, a (pseudo?) gene for a novel protein similar to MT1E (metallothionein 1E (functional)), ESTs, STSs, GSSs and two putative Cp... /FEA=mRNA_2 /DB_XREF=gi:6729581 /UG=Hs.64239 Human DNA sequence from clone RP5-1174N9 on chromosome 1p34.1-35.3. Contains the gene for a novel protein with IBR domain, a (pseudo?) gene for a novel protein similar to MT1E (metallothionein 1E (functional)), ESTs, STSs, GSSs and two putative CpG island </td> <td> AL031602 </td> <td> ring finger protein 19B </td> <td> RNF19B </td> <td> 127544 </td> <td> NM_001127361 /// NM_153341 /// XM_005270460 /// XM_006710356 /// XM_006710357 /// XM_006710358 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042267 // natural killer cell mediated cytotoxicity // inferred from electronic annotation /// 0072643 // interferon-gamma secretion // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0044194 // cytolytic granule // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -74.80 </td> <td> 110.22 </td> <td> -6.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212429_s_at </td> <td> 212429_s_at </td> <td> AW194657 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW194657 /FEA=EST /DB_XREF=gi:6473537 /DB_XREF=est:xb28b12.x1 /CLONE=IMAGE:2577599 /UG=Hs.75782 general transcription factor IIIC, polypeptide 2 (beta subunit, 110kD) </td> <td> AW194657 </td> <td> general transcription factor IIIC, polypeptide 2, beta 110kDa </td> <td> GTF3C2 </td> <td> 2976 </td> <td> NM_001035521 /// NM_001521 /// XM_005264272 /// XM_005264273 </td> <td> 0006351 // transcription, DNA-templated // inferred from direct assay /// 0006383 // transcription from RNA polymerase III promoter // inferred from direct assay /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042791 // 5S class rRNA transcription from RNA polymerase III type 1 promoter // inferred by curator /// 0042797 // tRNA transcription from RNA polymerase III promoter // inferred by curator </td> <td> 0000127 // transcription factor TFIIIC complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 74.90 </td> <td> 156.38 </td> <td> 6.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208873_s_at </td> <td> 208873_s_at </td> <td> BC000232 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000232.1 /DEF=Homo sapiens, Similar to deleted in polyposis 1, clone MGC:2267, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to deleted in polyposis 1 /DB_XREF=gi:12652946 /UG=Hs.178112 DNA segment, single copy probe LNS-CAILNS-CAII (deleted in polyposis /FL=gb:BC000232.1 </td> <td> BC000232 </td> <td> receptor accessory protein 5 </td> <td> REEP5 </td> <td> 7905 </td> <td> NM_005669 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 89.55 </td> <td> 170.47 </td> <td> 6.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202541_at </td> <td> 202541_at </td> <td> BF589679 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF589679 /FEA=EST /DB_XREF=gi:11682003 /DB_XREF=est:naa08b05.x1 /CLONE=IMAGE:3253977 /UG=Hs.146401 small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating) /FL=gb:NM_004757.1 gb:U10117.1 </td> <td> BF589679 </td> <td> aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 </td> <td> AIMP1 </td> <td> 9255 </td> <td> NM_001142415 /// NM_001142416 /// NM_004757 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007267 // cell-cell signaling // inferred from direct assay /// 0009611 // response to wounding // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0050900 // leukocyte migration // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0017101 // aminoacyl-tRNA synthetase multienzyme complex // inferred from direct assay /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0000049 // tRNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> 69.35 </td> <td> 78.05 </td> <td> 6.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 219485_s_at </td> <td> 219485_s_at </td> <td> NM_002814 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002814.1 /DEF=Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (PSMD10), mRNA.  /FEA=mRNA /GEN=PSMD10 /PROD=proteasome (prosome, macropain) 26S subunit,non-ATPase, 10 /DB_XREF=gi:4506216 /UG=Hs.7756 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 /FL=gb:AB009619.1 gb:D83197.1 gb:NM_002814.1 </td> <td> NM_002814 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 </td> <td> PSMD10 </td> <td> 5716 </td> <td> NM_002814 /// NM_170750 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007253 // cytoplasmic sequestering of NF-kappaB // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from mutant phenotype /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043409 // negative regulation of MAPK cascade // inferred from mutant phenotype /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045737 // positive regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070682 // proteasome regulatory particle assembly // inferred from mutant phenotype /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005838 // proteasome regulatory particle // traceable author statement /// 0008540 // proteasome regulatory particle, base subcomplex // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction </td> <td> 187.90 </td> <td> 386.93 </td> <td> 6.82 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213932_x_at </td> <td> 213932_x_at </td> <td> AI923492 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI923492 /FEA=EST /DB_XREF=gi:5659456 /DB_XREF=est:wn86a02.x1 /CLONE=IMAGE:2452682 /UG=Hs.181244 major histocompatibility complex, class I, A </td> <td> AI923492 </td> <td> major histocompatibility complex, class I, A </td> <td> HLA-A </td> <td> 3105 </td> <td> NM_001242758 /// NM_002116 /// XM_005275331 /// XM_006725750 /// XM_006725751 /// XM_006725857 /// XM_006725858 /// XM_006725859 /// XM_006725946 /// XM_006726046 /// XM_006726047 /// XM_006726135 /// XM_006726136 /// XM_006726137 /// XR_430999 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from direct assay /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002486 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent // inferred from direct assay /// 0006955 // immune response // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016045 // detection of bacterium // inferred from mutant phenotype /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0042270 // protection from natural killer cell mediated cytotoxicity // inferred from direct assay /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 2000568 // positive regulation of memory T cell activation // inferred from direct assay </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005797 // Golgi medial cisterna // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070971 // endoplasmic reticulum exit site // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005102 // receptor binding // not recorded /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0030881 // beta-2-microglobulin binding // inferred from direct assay /// 0030881 // beta-2-microglobulin binding // inferred from sequence or structural similarity /// 0042605 // peptide antigen binding // not recorded /// 0042605 // peptide antigen binding // inferred from direct assay /// 0042605 // peptide antigen binding // inferred from sequence or structural similarity /// 0042608 // T cell receptor binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046977 // TAP binding // inferred from direct assay </td> <td> -499.97 </td> <td> 1632.74 </td> <td> -6.82 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201930_at </td> <td> 201930_at </td> <td> NM_005915 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005915.2 /DEF=Homo sapiens minichromosome maintenance deficient (mis5, S. pombe) 6 (MCM6), mRNA.  /FEA=mRNA /GEN=MCM6 /PROD=minichromosome maintenance deficient (mis5, S.pombe) 6 /DB_XREF=gi:7427518 /UG=Hs.155462 minichromosome maintenance deficient (mis5, S. pombe) 6 /FL=gb:U46838.1 gb:D84557.1 gb:NM_005915.2 </td> <td> NM_005915 </td> <td> minichromosome maintenance complex component 6 </td> <td> MCM6 </td> <td> 4175 </td> <td> NM_005915 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006268 // DNA unwinding involved in DNA replication // inferred from electronic annotation /// 0006270 // DNA replication initiation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0015979 // photosynthesis // inferred from electronic annotation /// 0015995 // chlorophyll biosynthetic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0042555 // MCM complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016851 // magnesium chelatase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 143.53 </td> <td> 204.91 </td> <td> 6.82 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200628_s_at </td> <td> 200628_s_at </td> <td> M61715 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M61715.1 /DEF=Human tryptophanyl-tRNA synthetase (WRS) mRNA, complete cds. /FEA=mRNA /GEN=WARS /PROD=transfer RNA-Trp synthetase /DB_XREF=gi:340367 /UG=Hs.82030 tryptophanyl-tRNA synthetase /FL=gb:M77804.1 gb:M61715.1 gb:NM_004184.2 </td> <td> M61715 </td> <td> tryptophanyl-tRNA synthetase </td> <td> WARS </td> <td> 7453 </td> <td> NM_004184 /// NM_173701 /// NM_213645 /// NM_213646 /// XM_005268044 /// XM_006720248 /// XM_006720249 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006436 // tryptophanyl-tRNA aminoacylation // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045765 // regulation of angiogenesis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004830 // tryptophan-tRNA ligase activity // non-traceable author statement /// 0004830 // tryptophan-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -122.43 </td> <td> 404.31 </td> <td> -6.82 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212192_at </td> <td> 212192_at </td> <td> AI718937 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI718937 /FEA=EST /DB_XREF=gi:5036193 /DB_XREF=est:as50b04.x1 /CLONE=IMAGE:2320591 /UG=Hs.109438 Homo sapiens clone 24775 mRNA sequence </td> <td> AI718937 </td> <td> potassium channel tetramerization domain containing 12 </td> <td> KCTD12 </td> <td> 115207 </td> <td> NM_138444 </td> <td> 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 415.00 </td> <td> 665.45 </td> <td> 6.81 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200901_s_at </td> <td> 200901_s_at </td> <td> NM_002355 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002355.2 /DEF=Homo sapiens mannose-6-phosphate receptor (cation dependent) (M6PR), mRNA.  /FEA=mRNA /GEN=M6PR /PROD=cation-dependent mannose-6-phosphate receptorprecursor /DB_XREF=gi:10947032 /UG=Hs.75709 mannose-6-phosphate receptor (cation dependent) /FL=gb:NM_002355.2 gb:M16985.1 </td> <td> NM_002355 </td> <td> mannose-6-phosphate receptor (cation dependent) /// polyhomeotic homolog 1 (Drosophila) </td> <td> M6PR /// PHC1 </td> <td> 1911 /// 4074 </td> <td> NM_001207024 /// NM_002355 /// NM_004426 /// XM_005253334 /// XM_005253336 /// XM_005253376 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // traceable author statement /// 0015761 // mannose transport // inferred from electronic annotation /// 0016574 // histone ubiquitination // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation </td> <td> 0000323 // lytic vacuole // inferred from electronic annotation /// 0001739 // sex chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay /// 0035102 // PRC1 complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005537 // mannose binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015578 // mannose transmembrane transporter activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 83.22 </td> <td> 171.86 </td> <td> 6.80 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 206052_s_at </td> <td> 206052_s_at </td> <td> NM_006527 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006527.1 /DEF=Homo sapiens Hairpin binding protein, histone (HBP), mRNA. /FEA=mRNA /GEN=HBP /PROD=Hairpin binding protein, histone /DB_XREF=gi:5729861 /UG=Hs.75257 stem-loop (histone) binding protein /FL=gb:U75679.1 gb:NM_006527.1 </td> <td> NM_006527 </td> <td> stem-loop binding protein </td> <td> SLBP </td> <td> 7884 </td> <td> NM_006527 </td> <td> 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006398 // histone mRNA 3'-end processing // inferred from sequence or structural similarity /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008334 // histone mRNA metabolic process // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0033260 // nuclear cell cycle DNA replication // inferred from mutant phenotype /// 0051028 // mRNA transport // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from sequence or structural similarity </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0071207 // histone pre-mRNA stem-loop binding // inferred from sequence or structural similarity /// 0071208 // histone pre-mRNA DCP binding // inferred from sequence or structural similarity </td> <td> 101.60 </td> <td> 235.78 </td> <td> 6.80 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201555_at </td> <td> 201555_at </td> <td> NM_002388 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002388.2 /DEF=Homo sapiens minichromosome maintenance deficient (S. cerevisiae) 3 (MCM3), mRNA.  /FEA=mRNA /GEN=MCM3 /PROD=minichromosome maintenance deficient (S.cerevisiae) 3 /DB_XREF=gi:6631094 /UG=Hs.179565 minichromosome maintenance deficient (S. cerevisiae) 3 /FL=gb:BC001626.1 gb:NM_002388.2 gb:D38073.1 </td> <td> NM_002388 </td> <td> minichromosome maintenance complex component 3 </td> <td> MCM3 </td> <td> 4172 </td> <td> NM_001270472 /// NM_002388 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006270 // DNA replication initiation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0015979 // photosynthesis // inferred from electronic annotation /// 0015995 // chlorophyll biosynthetic process // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005658 // alpha DNA polymerase:primase complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0042555 // MCM complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016851 // magnesium chelatase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> 116.12 </td> <td> 178.71 </td> <td> 6.80 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200970_s_at </td> <td> 200970_s_at </td> <td> AL136807 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136807.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434L1621 (from clone DKFZp434L1621); complete cds.  /FEA=mRNA /GEN=DKFZp434L1621 /PROD=hypothetical protein /DB_XREF=gi:12053124 /UG=Hs.76698 stress-associated endoplasmic reticulum protein 1; ribosome associated membrane protein 4 /FL=gb:AL136807.1 gb:AF136975.1 gb:AB022427.1 gb:NM_014445.1 </td> <td> AL136807 </td> <td> stress-associated endoplasmic reticulum protein 1 </td> <td> SERP1 </td> <td> 27230 </td> <td> NM_014445 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007009 // plasma membrane organization // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048644 // muscle organ morphogenesis // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005840 // ribosome // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 130.20 </td> <td> 316.12 </td> <td> 6.78 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 210002_at </td> <td> 210002_at </td> <td> D87811 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D87811.1 /DEF=Homo sapiens mRNA for GATA-6, complete cds. /FEA=mRNA /PROD=GATA-6 /DB_XREF=gi:2506075 /UG=Hs.50924 GATA-binding protein 6 /FL=gb:U66075.1 gb:D87811.1 gb:NM_005257.1 </td> <td> D87811 </td> <td> GATA binding protein 6 </td> <td> GATA6 </td> <td> 2627 </td> <td> NM_005257 /// XM_005258248 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003148 // outflow tract septum morphogenesis // inferred from mutant phenotype /// 0003309 // type B pancreatic cell differentiation // inferred from electronic annotation /// 0003310 // pancreatic A cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007493 // endodermal cell fate determination // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008584 // male gonad development // inferred from expression pattern /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0014898 // cardiac muscle hypertrophy in response to stress // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0032911 // negative regulation of transforming growth factor beta1 production // inferred from mutant phenotype /// 0032912 // negative regulation of transforming growth factor beta2 production // inferred from mutant phenotype /// 0035239 // tube morphogenesis // inferred from electronic annotation /// 0035987 // endodermal cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043627 // response to estrogen // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048645 // organ formation // inferred from electronic annotation /// 0048738 // cardiac muscle tissue development // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from mutant phenotype /// 0051891 // positive regulation of cardioblast differentiation // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060430 // lung saccule development // inferred from electronic annotation /// 0060486 // Clara cell differentiation // inferred from electronic annotation /// 0060510 // Type II pneumocyte differentiation // inferred from electronic annotation /// 0060575 // intestinal epithelial cell differentiation // inferred from direct assay /// 0060947 // cardiac vascular smooth muscle cell differentiation // inferred from mutant phenotype /// 0070848 // response to growth factor // inferred from direct assay /// 0071158 // positive regulation of cell cycle arrest // inferred from direct assay /// 0071371 // cellular response to gonadotropin stimulus // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071773 // cellular response to BMP stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from mutant phenotype /// 0001103 // RNA polymerase II repressing transcription factor binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -89.17 </td> <td> 92.81 </td> <td> -6.77 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 206976_s_at </td> <td> 206976_s_at </td> <td> NM_006644 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006644.1 /DEF=Homo sapiens heat shock 105kD (HSP105B), mRNA. /FEA=mRNA /GEN=HSP105B /PROD=heat shock 105kD /DB_XREF=gi:5729878 /UG=Hs.36927 heat shock 105kD /FL=gb:AB003333.1 gb:NM_006644.1 </td> <td> NM_006644 </td> <td> heat shock 105kDa/110kDa protein 1 </td> <td> HSPH1 </td> <td> 10808 </td> <td> NM_001286503 /// NM_001286504 /// NM_001286505 /// NM_006644 /// XM_005266236 /// XM_006719757 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0045345 // positive regulation of MHC class I biosynthetic process // traceable author statement /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051135 // positive regulation of NK T cell activation // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from electronic annotation </td> <td> 184.22 </td> <td> 295.44 </td> <td> 6.76 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212783_at </td> <td> 212783_at </td> <td> AI538172 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI538172 /FEA=EST /DB_XREF=gi:4452307 /DB_XREF=est:ti75f08.x1 /CLONE=IMAGE:2137863 /UG=Hs.91065 hypothetical protein DKFZp761B2423 </td> <td> AI538172 </td> <td> retinoblastoma binding protein 6 </td> <td> RBBP6 </td> <td> 5930 </td> <td> NM_006910 /// NM_018703 /// NM_032626 /// XM_005255461 /// XM_005255462 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0061053 // somite development // inferred from electronic annotation </td> <td> 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -69.58 </td> <td> 131.01 </td> <td> -6.76 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213500_at </td> <td> 213500_at </td> <td> AI307760 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI307760 /FEA=EST /DB_XREF=gi:4002364 /DB_XREF=est:tb24g09.x1 /CLONE=IMAGE:2055328 /UG=Hs.14074 Homo sapiens clone 24627 mRNA sequence </td> <td> AI307760 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 64.05 </td> <td> 41.88 </td> <td> 6.75 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 205097_at </td> <td> 205097_at </td> <td> AI025519 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI025519 /FEA=EST /DB_XREF=gi:3241132 /DB_XREF=est:ov75c04.x1 /CLONE=IMAGE:1643142 /UG=Hs.29981 solute carrier family 26 (sulfate transporter), member 2 /FL=gb:NM_000112.1 gb:U14528.1 </td> <td> AI025519 </td> <td> solute carrier family 26 (anion exchanger), member 2 </td> <td> SLC26A2 </td> <td> 1836 </td> <td> NM_000112 </td> <td> 0001503 // ossification // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0008272 // sulfate transport // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement /// 0050428 // 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 1902358 // sulfate transmembrane transport // inferred from electronic annotation /// 1902358 // sulfate transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0008271 // secondary active sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // traceable author statement </td> <td> 85.00 </td> <td> 97.28 </td> <td> 6.75 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200953_s_at </td> <td> 200953_s_at </td> <td> NM_001759 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001759.1 /DEF=Homo sapiens cyclin D2 (CCND2), mRNA. /FEA=mRNA /GEN=CCND2 /PROD=cyclin D2 /DB_XREF=gi:4502616 /UG=Hs.75586 cyclin D2 /FL=gb:M90813.1 gb:D13639.1 gb:NM_001759.1 </td> <td> NM_001759 </td> <td> cyclin D2 </td> <td> CCND2 </td> <td> 894 </td> <td> NM_001759 /// XM_005253813 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0045737 // positive regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> 107.63 </td> <td> 141.44 </td> <td> 6.74 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212365_at </td> <td> 212365_at </td> <td> BF215996 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF215996 /FEA=EST /DB_XREF=gi:11109582 /DB_XREF=est:601881549F1 /CLONE=IMAGE:4093740 /UG=Hs.121576 Homo sapiens cDNA FLJ20153 fis, clone COL08656, highly similar to AJ001381 Homo sapiens incomplete cDNA for a mutated allele </td> <td> BF215996 </td> <td> myosin IB </td> <td> MYO1B </td> <td> 4430 </td> <td> NM_001130158 /// NM_001161819 /// NM_012223 /// XM_005246569 /// XM_005246572 /// XM_005246575 /// XM_005246577 /// XM_006712536 /// XM_006712537 </td> <td> 0006892 // post-Golgi vesicle-mediated transport // inferred from mutant phenotype /// 0007015 // actin filament organization // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from sequence or structural similarity /// 0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0051017 // actin filament bundle assembly // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005769 // early endosome // inferred from direct assay /// 0005884 // actin filament // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005903 // brush border // inferred from sequence or structural similarity /// 0010008 // endosome membrane // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071944 // cell periphery // inferred from sequence or structural similarity </td> <td> 0000146 // microfilament motor activity // inferred from mutant phenotype /// 0000146 // microfilament motor activity // inferred from sequence or structural similarity /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from mutant phenotype /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from mutant phenotype </td> <td> -110.43 </td> <td> 212.46 </td> <td> -6.73 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212170_at </td> <td> 212170_at </td> <td> BF447705 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF447705 /FEA=EST /DB_XREF=gi:11512843 /DB_XREF=est:7q94d07.x1 /CLONE=IMAGE:3706021 /UG=Hs.180895 putative brain nuclearly-targeted protein </td> <td> BF447705 </td> <td> RNA binding motif protein 12 </td> <td> RBM12 </td> <td> 10137 </td> <td> NM_001198838 /// NM_001198840 /// NM_006047 /// NM_152838 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 56.88 </td> <td> 35.69 </td> <td> 6.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 214051_at </td> <td> 214051_at </td> <td> BF677486 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF677486 /FEA=EST /DB_XREF=gi:11951381 /DB_XREF=est:602085745F1 /CLONE=IMAGE:4249834 /UG=Hs.56145 thymosin, beta, identified in neuroblastoma cells </td> <td> BF677486 </td> <td> thymosin beta 15a /// thymosin beta 15B </td> <td> TMSB15A /// TMSB15B </td> <td> 11013 /// 286527 </td> <td> NM_021992 /// NM_194324 </td> <td> 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0042989 // sequestering of actin monomers // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation </td> <td> 78.20 </td> <td> 144.35 </td> <td> 6.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209285_s_at </td> <td> 209285_s_at </td> <td> N38985 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N38985 /FEA=EST /DB_XREF=gi:1162192 /DB_XREF=est:yv21f02.s1 /CLONE=IMAGE:243387 /UG=Hs.23440 KIAA1105 protein /FL=gb:AF180425.2 </td> <td> N38985 </td> <td> family with sequence similarity 208, member A </td> <td> FAM208A </td> <td> 23272 </td> <td> NM_001112736 /// NM_015224 /// XM_005264999 /// XM_006713077 /// XM_006713078 </td> <td>  </td> <td>  </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 57.23 </td> <td> 52.29 </td> <td> 6.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212909_at </td> <td> 212909_at </td> <td> AL567376 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL567376 /FEA=EST /DB_XREF=gi:12920672 /DB_XREF=est:AL567376 /CLONE=CS0DF024YO04 (3 prime) /UG=Hs.85339 G protein-coupled receptor 39 </td> <td> AL567376 </td> <td> LY6/PLAUR domain containing 1 </td> <td> LYPD1 </td> <td> 116372 </td> <td> NM_001077427 /// NM_144586 /// XM_005263583 /// XM_005263584 </td> <td>  </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 233.65 </td> <td> 358.57 </td> <td> 6.71 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218512_at </td> <td> 218512_at </td> <td> NM_018256 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018256.1 /DEF=Homo sapiens hypothetical protein FLJ10881 (FLJ10881), mRNA. /FEA=mRNA /GEN=FLJ10881 /PROD=hypothetical protein FLJ10881 /DB_XREF=gi:8922736 /UG=Hs.73291 hypothetical protein FLJ10881 /FL=gb:AF242546.1 gb:NM_018256.1 </td> <td> NM_018256 </td> <td> WD repeat domain 12 </td> <td> WDR12 </td> <td> 55759 </td> <td> NM_018256 </td> <td> 0000463 // maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from mutant phenotype /// 0000466 // maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042273 // ribosomal large subunit biogenesis // inferred by curator </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0030687 // preribosome, large subunit precursor // inferred from direct assay /// 0070545 // PeBoW complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0043021 // ribonucleoprotein complex binding // inferred from electronic annotation </td> <td> 84.68 </td> <td> 264.91 </td> <td> 6.71 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202021_x_at </td> <td> 202021_x_at </td> <td> AF083441 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF083441.1 /DEF=Homo sapiens SUI1 isolog mRNA, complete cds. /FEA=mRNA /PROD=SUI1 isolog /DB_XREF=gi:5813822 /UG=Hs.150580 putative translation initiation factor /FL=gb:BC005118.1 gb:AF100737.1 gb:L26247.1 gb:NM_005801.1 gb:AF083441.1 </td> <td> AF083441 </td> <td> eukaryotic translation initiation factor 1 </td> <td> EIF1 </td> <td> 10209 </td> <td> NM_005801 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0006950 // response to stress // non-traceable author statement /// 0009048 // dosage compensation by inactivation of X chromosome // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement </td> <td> 0003743 // translation initiation factor activity // non-traceable author statement /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -903.92 </td> <td> 2204.24 </td> <td> -6.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202129_s_at </td> <td> 202129_s_at </td> <td> AW006290 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW006290 /FEA=EST /DB_XREF=gi:5855068 /DB_XREF=est:wq69f11.x1 /CLONE=IMAGE:2476557 /UG=Hs.209061 sudD (suppressor of bimD6, Aspergillus nidulans) homolog /FL=gb:AF013591.1 gb:NM_003831.1 </td> <td> AW006290 </td> <td> RIO kinase 3 </td> <td> RIOK3 </td> <td> 8780 </td> <td> NM_003831 /// NM_145906 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007059 // chromosome segregation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation </td> <td> -122.55 </td> <td> 155.55 </td> <td> -6.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212987_at </td> <td> 212987_at </td> <td> AL031178 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL031178 /DEF=Human DNA sequence from clone 341E18 on chromosome 6p11.2-12.3. Contains a SerineThreonine Protein Kinase gene (presumptive isolog of a Rat gene) and a novel alternatively spliced gene. Contains a putative CpG island, ESTs and GSSs /FEA=mRNA_2 /DB_XREF=gi:3550040 /UG=Hs.11050 F-box only protein 9 </td> <td> AL031178 </td> <td> F-box protein 9 </td> <td> FBXO9 </td> <td> 26268 </td> <td> NM_012347 /// NM_033480 /// NM_033481 /// XM_005248995 /// XM_005248996 /// XM_006715050 /// XM_006715051 </td> <td> 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016567 // protein ubiquitination // non-traceable author statement /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0032006 // regulation of TOR signaling // inferred from mutant phenotype </td> <td> 0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 91.03 </td> <td> 164.61 </td> <td> 6.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 221765_at </td> <td> 221765_at </td> <td> AI378044 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI378044 /FEA=EST /DB_XREF=gi:4187897 /DB_XREF=est:te67h09.x1 /CLONE=IMAGE:2091809 /UG=Hs.23703 ESTs </td> <td> AI378044 </td> <td> UDP-glucose ceramide glucosyltransferase </td> <td> UGCG </td> <td> 7357 </td> <td> NM_003358 /// XM_005252186 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006679 // glucosylceramide biosynthetic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0006688 // glycosphingolipid biosynthetic process // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0008120 // ceramide glucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> -113.78 </td> <td> 143.26 </td> <td> -6.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 221825_at </td> <td> 221825_at </td> <td> AU151793 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU151793 /FEA=EST /DB_XREF=gi:11013314 /DB_XREF=est:AU151793 /CLONE=NT2RP2006115 /UG=Hs.157078 Homo sapiens cDNA FLJ12793 fis, clone NT2RP2002033 </td> <td> AU151793 </td> <td> angel homolog 2 (Drosophila) </td> <td> ANGEL2 </td> <td> 90806 </td> <td> NM_144567 /// XM_005273344 /// XM_005273345 /// XM_005273346 /// XM_005273347 /// XM_005273349 /// XM_006711616 /// XR_247045 </td> <td>  </td> <td>  </td> <td>  </td> <td> 64.20 </td> <td> 88.30 </td> <td> 6.69 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201662_s_at </td> <td> 201662_s_at </td> <td> D89053 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D89053.1 /DEF=Homo sapiens mRNA for Acyl-CoA synthetase 3, complete cds. /FEA=mRNA /PROD=Acyl-CoA synthetase 3 /DB_XREF=gi:4165017 /UG=Hs.268012 fatty-acid-Coenzyme A ligase, long-chain 3 /FL=gb:NM_004457.2 gb:D89053.1 gb:AF116690.1 </td> <td> D89053 </td> <td> acyl-CoA synthetase long-chain family member 3 </td> <td> ACSL3 </td> <td> 2181 </td> <td> NM_004457 /// NM_203372 </td> <td> 0001676 // long-chain fatty acid metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0034379 // very-low-density lipoprotein particle assembly // inferred from mutant phenotype /// 0042998 // positive regulation of Golgi to plasma membrane protein transport // inferred from mutant phenotype /// 0044539 // long-chain fatty acid import // inferred from direct assay /// 0051047 // positive regulation of secretion // inferred from mutant phenotype /// 2001247 // positive regulation of phosphatidylcholine biosynthetic process // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005811 // lipid particle // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004467 // long-chain fatty acid-CoA ligase activity // inferred from mutant phenotype /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction </td> <td> -252.15 </td> <td> 356.73 </td> <td> -6.69 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201637_s_at </td> <td> 201637_s_at </td> <td> NM_005087 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005087.1 /DEF=Homo sapiens fragile X mental retardation, autosomal homolog 1 (FXR1), mRNA.  /FEA=mRNA /GEN=FXR1 /PROD=fragile X mental retardation-related protein 1 /DB_XREF=gi:4826735 /UG=Hs.82712 fragile X mental retardation, autosomal homolog 1 /FL=gb:NM_005087.1 gb:U25165.1 </td> <td> NM_005087 </td> <td> fragile X mental retardation, autosomal homolog 1 </td> <td> FXR1 </td> <td> 8087 </td> <td> NM_001013438 /// NM_001013439 /// NM_005087 /// XM_005247813 /// XM_005247814 /// XM_005247815 /// XM_005247816 /// XM_006713775 </td> <td> 0006915 // apoptotic process // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005844 // polysome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0043034 // costamere // inferred from electronic annotation </td> <td> 0002151 // G-quadruplex RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -170.30 </td> <td> 431.10 </td> <td> -6.69 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 217870_s_at </td> <td> 217870_s_at </td> <td> NM_016308 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016308.1 /DEF=Homo sapiens UMP-CMP kinase (LOC51727), mRNA. /FEA=mRNA /GEN=LOC51727 /PROD=UMP-CMP kinase /DB_XREF=gi:7706496 /UG=Hs.11463 UMP-CMP kinase /FL=gb:AF259961.1 gb:AF110643.1 gb:AF112216.1 gb:AF070416.1 gb:NM_016308.1 </td> <td> NM_016308 </td> <td> cytidine monophosphate (UMP-CMP) kinase 1, cytosolic </td> <td> CMPK1 </td> <td> 51727 </td> <td> NM_001136140 /// NM_016308 /// NR_046394 /// NR_046395 </td> <td> 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006165 // nucleoside diphosphate phosphorylation // inferred from direct assay /// 0006221 // pyrimidine nucleotide biosynthetic process // inferred from electronic annotation /// 0006222 // UMP biosynthetic process // traceable author statement /// 0006225 // UDP biosynthetic process // inferred from electronic annotation /// 0006227 // dUDP biosynthetic process // inferred from electronic annotation /// 0006240 // dCDP biosynthetic process // inferred from electronic annotation /// 0009142 // nucleoside triphosphate biosynthetic process // inferred from direct assay /// 0009220 // pyrimidine ribonucleotide biosynthetic process // traceable author statement /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018963 // phthalate metabolic process // inferred from electronic annotation /// 0022602 // ovulation cycle process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046705 // CDP biosynthetic process // inferred from electronic annotation /// 0046939 // nucleotide phosphorylation // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005763 // mitochondrial small ribosomal subunit // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0004127 // cytidylate kinase activity // inferred from electronic annotation /// 0004550 // nucleoside diphosphate kinase activity // inferred from direct assay /// 0004849 // uridine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0009041 // uridylate kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016776 // phosphotransferase activity, phosphate group as acceptor // inferred from electronic annotation /// 0019201 // nucleotide kinase activity // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation /// 0033862 // UMP kinase activity // inferred from electronic annotation </td> <td> 111.30 </td> <td> 421.40 </td> <td> 6.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213552_at </td> <td> 213552_at </td> <td> W87398 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W87398 /FEA=EST /DB_XREF=gi:1401453 /DB_XREF=est:zh66h10.s1 /CLONE=IMAGE:417091 /UG=Hs.183006 KIAA0836 protein </td> <td> W87398 </td> <td> glucuronic acid epimerase </td> <td> GLCE </td> <td> 26035 </td> <td> NM_015554 /// XM_005254298 /// XM_005254299 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from direct assay /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from sequence or structural similarity /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030210 // heparin biosynthetic process // inferred from electronic annotation /// 0030210 // heparin biosynthetic process // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0016853 // isomerase activity // inferred from electronic annotation /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from sequence or structural similarity /// 0047464 // heparosan-N-sulfate-glucuronate 5-epimerase activity // inferred from mutant phenotype /// 0050379 // UDP-glucuronate 5'-epimerase activity // inferred from direct assay </td> <td> 119.65 </td> <td> 179.30 </td> <td> 6.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208848_at </td> <td> 208848_at </td> <td> M30471 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M30471.1 /DEF=Human class III alcohol dehydrogenase (ADH5) chi subunit mRNA, complete cds.  /FEA=mRNA /GEN=ADH5 /PROD=alcohol dehydrogenase 3 /DB_XREF=gi:178133 /UG=Hs.78989 alcohol dehydrogenase 5 (class III), chi polypeptide /FL=gb:NM_000671.2 gb:M29872.1 gb:M30471.1 </td> <td> M30471 </td> <td> alcohol dehydrogenase 5 (class III), chi polypeptide </td> <td> ADH5 </td> <td> 128 </td> <td> NM_000671 </td> <td> 0001523 // retinoid metabolic process // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0006068 // ethanol catabolic process // inferred from electronic annotation /// 0006069 // ethanol oxidation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0018119 // peptidyl-cysteine S-nitrosylation // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0045777 // positive regulation of blood pressure // inferred from electronic annotation /// 0046294 // formaldehyde catabolic process // inferred from electronic annotation /// 0051409 // response to nitrosative stress // inferred from electronic annotation /// 0051775 // response to redox state // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004022 // alcohol dehydrogenase (NAD) activity // inferred from electronic annotation /// 0005504 // fatty acid binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0018467 // formaldehyde dehydrogenase activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051903 // S-(hydroxymethyl)glutathione dehydrogenase activity // traceable author statement </td> <td> 70.40 </td> <td> 122.92 </td> <td> 6.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 203288_at </td> <td> 203288_at </td> <td> NM_014686 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014686.1 /DEF=Homo sapiens KIAA0355 gene product (KIAA0355), mRNA. /FEA=mRNA /GEN=KIAA0355 /PROD=KIAA0355 gene product /DB_XREF=gi:7662075 /UG=Hs.186840 KIAA0355 gene product /FL=gb:AB002353.1 gb:NM_014686.1 </td> <td> NM_014686 </td> <td> KIAA0355 </td> <td> KIAA0355 </td> <td> 9710 </td> <td> NM_014686 /// XM_005259444 </td> <td>  </td> <td>  </td> <td>  </td> <td> 93.90 </td> <td> 190.78 </td> <td> 6.67 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212130_x_at </td> <td> 212130_x_at </td> <td> AL537707 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL537707 /FEA=EST /DB_XREF=gi:12801200 /DB_XREF=est:AL537707 /CLONE=CS0DF026YP17 (5 prime) /UG=Hs.150580 putative translation initiation factor </td> <td> AL537707 </td> <td> eukaryotic translation initiation factor 1 </td> <td> EIF1 </td> <td> 10209 </td> <td> NM_005801 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0006950 // response to stress // non-traceable author statement /// 0009048 // dosage compensation by inactivation of X chromosome // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement </td> <td> 0003743 // translation initiation factor activity // non-traceable author statement /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -871.68 </td> <td> 2309.16 </td> <td> -6.67 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 216061_x_at </td> <td> 216061_x_at </td> <td> AU150748 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU150748 /FEA=EST /DB_XREF=gi:11012269 /DB_XREF=est:AU150748 /CLONE=NT2RP2003517 /UG=Hs.1976 platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog) </td> <td> AU150748 </td> <td> platelet-derived growth factor beta polypeptide </td> <td> PDGFB </td> <td> 5155 </td> <td> NM_002608 /// NM_033016 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0002548 // monocyte chemotaxis // inferred from direct assay /// 0002576 // platelet degranulation // traceable author statement /// 0003104 // positive regulation of glomerular filtration // inferred from sequence or structural similarity /// 0006260 // DNA replication // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006929 // substrate-dependent cell migration // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009611 // response to wounding // inferred from direct assay /// 0009611 // response to wounding // non-traceable author statement /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010512 // negative regulation of phosphatidylinositol biosynthetic process // inferred from direct assay /// 0010544 // negative regulation of platelet activation // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from direct assay /// 0016049 // cell growth // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030031 // cell projection assembly // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032147 // activation of protein kinase activity // inferred from direct assay /// 0032148 // activation of protein kinase B activity // inferred from direct assay /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0035793 // positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway // inferred from direct assay /// 0038001 // paracrine signaling // inferred from sequence or structural similarity /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from direct assay /// 0043627 // response to estrogen // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045737 // positive regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045743 // positive regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050918 // positive chemotaxis // inferred from direct assay /// 0050921 // positive regulation of chemotaxis // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from direct assay /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from electronic annotation /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from direct assay /// 0071506 // cellular response to mycophenolic acid // inferred from sequence or structural similarity /// 0072126 // positive regulation of glomerular mesangial cell proliferation // inferred from direct assay /// 0072255 // metanephric glomerular mesangial cell development // inferred from sequence or structural similarity /// 0072262 // metanephric glomerular mesangial cell proliferation involved in metanephros development // inferred from electronic annotation /// 0072264 // metanephric glomerular endothelium development // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from mutant phenotype /// 0090280 // positive regulation of calcium ion import // inferred from direct assay /// 1900127 // positive regulation of hyaluronan biosynthetic process // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay /// 2000573 // positive regulation of DNA biosynthetic process // inferred from direct assay /// 2000591 // positive regulation of metanephric mesenchymal cell migration // inferred from direct assay </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // not recorded /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0031093 // platelet alpha granule lumen // traceable author statement </td> <td> 0005161 // platelet-derived growth factor receptor binding // inferred from direct assay /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005161 // platelet-derived growth factor receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from direct assay /// 0016176 // superoxide-generating NADPH oxidase activator activity // inferred from direct assay /// 0042056 // chemoattractant activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from physical interaction </td> <td> 102.05 </td> <td> 167.45 </td> <td> 6.67 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213573_at </td> <td> 213573_at </td> <td> AA861608 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA861608 /FEA=EST /DB_XREF=gi:2953748 /DB_XREF=est:ak34e01.s1 /CLONE=IMAGE:1407864 /UG=Hs.180446 karyopherin (importin) beta 1 </td> <td> AA861608 </td> <td> karyopherin (importin) beta 1 </td> <td> KPNB1 </td> <td> 3837 </td> <td> NM_001276453 /// NM_002265 </td> <td> 0000060 // protein import into nucleus, translocation // traceable author statement /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006610 // ribosomal protein import into nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071782 // endoplasmic reticulum tubular network // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008270 // zinc ion binding // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 93.70 </td> <td> 182.85 </td> <td> 6.67 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200058_s_at </td> <td> 200058_s_at </td> <td> BC001417 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001417.1 /DEF=Homo sapiens, Similar to U5 snRNP-specific protein, 200 kDa (DEXH RNA helicase family), clone MGC:2580, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to U5 snRNP-specific protein, 200 kDa(DEXH RNA helicase family) /DB_XREF=gi:12655128 /UG=Hs.246112 KIAA0788 protein /FL=gb:BC001417.1 gb:AF119874.1 </td> <td> BC001417 </td> <td> U5 small nuclear ribonucleoprotein 200 kDa helicase-like /// small nuclear ribonucleoprotein 200kDa (U5) </td> <td> LOC101929240 /// SNRNP200 </td> <td> 23020 /// 101929240 </td> <td> NM_014014 /// XR_243770 /// XR_253745 /// XR_424859 </td> <td> 0000354 // cis assembly of pre-catalytic spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005682 // U5 snRNP // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 85.20 </td> <td> 327.65 </td> <td> 6.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209651_at </td> <td> 209651_at </td> <td> BC001830 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001830.1 /DEF=Homo sapiens, Similar to transforming growth factor beta 1 induced transcript 1, clone MGC:4078, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to transforming growth factor beta 1induced transcript 1 /DB_XREF=gi:12804778 /UG=Hs.25511 transforming growth factor beta 1 induced transcript 1 /FL=gb:BC001830.1 gb:AF116343.1 gb:NM_015927.1 </td> <td> BC001830 </td> <td> transforming growth factor beta 1 induced transcript 1 </td> <td> TGFB1I1 </td> <td> 7041 </td> <td> NM_001042454 /// NM_001164719 /// NM_015927 </td> <td> 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0030579 // ubiquitin-dependent SMAD protein catabolic process // inferred from direct assay /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay </td> <td> 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048495 // Roundabout binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction /// 0050681 // androgen receptor binding // non-traceable author statement /// 0070411 // I-SMAD binding // inferred from physical interaction </td> <td> 96.85 </td> <td> 325.75 </td> <td> 6.65 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218042_at </td> <td> 218042_at </td> <td> NM_016129 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016129.1 /DEF=Homo sapiens COP9 complex subunit 4 (LOC51138), mRNA. /FEA=mRNA /GEN=LOC51138 /PROD=COP9 complex subunit 4 /DB_XREF=gi:7705844 /UG=Hs.6671 COP9 complex subunit 4 /FL=gb:BC004302.1 gb:AF100757.1 gb:NM_016129.1 </td> <td> NM_016129 </td> <td> COP9 signalosome subunit 4 </td> <td> COPS4 </td> <td> 51138 </td> <td> NM_001258006 /// NM_016129 </td> <td> 0000338 // protein deneddylation // inferred from mutant phenotype /// 0010388 // cullin deneddylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from direct assay /// 0008180 // COP9 signalosome // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 119.90 </td> <td> 351.52 </td> <td> 6.65 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209409_at </td> <td> 209409_at </td> <td> D86962 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D86962.1 /DEF=Human mRNA for KIAA0207 gene, complete cds. /FEA=mRNA /GEN=KIAA0207 /DB_XREF=gi:1503997 /UG=Hs.81875 growth factor receptor-bound protein 10 /FL=gb:D86962.1 gb:AF000017.1 </td> <td> D86962 </td> <td> growth factor receptor-bound protein 10 </td> <td> GRB10 </td> <td> 2887 </td> <td> NM_001001549 /// NM_001001550 /// NM_001001555 /// NM_005311 /// XM_005271760 /// XM_005271761 /// XM_005271765 /// XM_005271766 /// XM_005271767 /// XM_006715703 /// XM_006715704 /// XM_006715705 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from direct assay /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0032868 // response to insulin // inferred from sequence or structural similarity /// 0042326 // negative regulation of phosphorylation // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from sequence or structural similarity /// 0045719 // negative regulation of glycogen biosynthetic process // inferred from electronic annotation /// 0045719 // negative regulation of glycogen biosynthetic process // inferred from sequence or structural similarity /// 0046325 // negative regulation of glucose import // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement </td> <td> 0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005158 // insulin receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction </td> <td> -236.35 </td> <td> 692.32 </td> <td> -6.64 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212457_at </td> <td> 212457_at </td> <td> AL161985 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL161985.1 /DEF=Homo sapiens mRNA; cDNA DKFZp761J1810 (from clone DKFZp761J1810). /FEA=mRNA /DB_XREF=gi:7328121 /UG=Hs.274184 transcription factor binding to IGHM enhancer 3 </td> <td> AL161985 </td> <td> transcription factor binding to IGHM enhancer 3 </td> <td> TFE3 </td> <td> 7030 </td> <td> NM_001282142 /// NM_006521 /// XM_006724549 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006959 // humoral immune response // inferred from sequence or structural similarity /// 0045670 // regulation of osteoclast differentiation // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -66.38 </td> <td> 158.84 </td> <td> -6.64 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208654_s_at </td> <td> 208654_s_at </td> <td> BF669455 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF669455 /FEA=EST /DB_XREF=gi:11943350 /DB_XREF=est:602120159F1 /CLONE=IMAGE:4277366 /UG=Hs.43910 CD164 antigen, sialomucin /FL=gb:AF299341.1 gb:AF299343.1 gb:AF263279.1 </td> <td> BF669455 </td> <td> CD164 molecule, sialomucin </td> <td> CD164 </td> <td> 8763 </td> <td> NM_001142401 /// NM_001142402 /// NM_001142403 /// NM_001142404 /// NM_006016 </td> <td> 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007157 // heterophilic cell-cell adhesion // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0030097 // hemopoiesis // non-traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 200.20 </td> <td> 371.95 </td> <td> 6.63 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213629_x_at </td> <td> 213629_x_at </td> <td> BF246115 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF246115 /FEA=EST /DB_XREF=gi:11160133 /DB_XREF=est:601854068F1 /CLONE=IMAGE:4073921 /UG=Hs.8765 RNA helicase-related protein </td> <td> BF246115 </td> <td> metallothionein 1F </td> <td> MT1F </td> <td> 4494 </td> <td> NM_005949 </td> <td> 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0071276 // cellular response to cadmium ion // inferred from expression pattern /// 0071294 // cellular response to zinc ion // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0005507 // copper ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046870 // cadmium ion binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -179.45 </td> <td> 313.90 </td> <td> -6.63 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 203438_at </td> <td> 203438_at </td> <td> AI435828 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI435828 /FEA=EST /DB_XREF=gi:4305913 /DB_XREF=est:th79e05.x1 /CLONE=IMAGE:2124896 /UG=Hs.155223 stanniocalcin 2 /FL=gb:BC000658.1 gb:AF055460.1 gb:AB012664.1 gb:AF098462.1 gb:AF031036.1 gb:NM_003714.1 </td> <td> AI435828 </td> <td> stanniocalcin 2 </td> <td> STC2 </td> <td> 8614 </td> <td> NM_003714 </td> <td> 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007584 // response to nutrient // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from electronic annotation /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 2001256 // regulation of store-operated calcium entry // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation </td> <td> 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -147.40 </td> <td> 120.05 </td> <td> -6.62 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209034_at </td> <td> 209034_at </td> <td> AF279899 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF279899.1 /DEF=Homo sapiens PNAS-145 mRNA, complete cds. /FEA=mRNA /PROD=PNAS-145 /DB_XREF=gi:12751123 /UG=Hs.75969 proline-rich protein with nuclear targeting signal /FL=gb:AF279899.1 gb:U03105.1 gb:NM_006813.1 </td> <td> AF279899 </td> <td> proline-rich nuclear receptor coactivator 1 </td> <td> PNRC1 </td> <td> 10957 </td> <td> NM_006813 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -277.45 </td> <td> 229.47 </td> <td> -6.61 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200769_s_at </td> <td> 200769_s_at </td> <td> NM_005911 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005911.1 /DEF=Homo sapiens methionine adenosyltransferase II, alpha (MAT2A), mRNA.  /FEA=mRNA /GEN=MAT2A /PROD=methionine adenosyltransferase II, alpha /DB_XREF=gi:5174528 /UG=Hs.77502 methionine adenosyltransferase II, alpha /FL=gb:BC001686.1 gb:BC001854.1 gb:NM_005911.1 </td> <td> NM_005911 </td> <td> methionine adenosyltransferase II, alpha </td> <td> MAT2A </td> <td> 4144 </td> <td> NM_005911 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from direct assay /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0032259 // methylation // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0048269 // methionine adenosyltransferase complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004478 // methionine adenosyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 161.48 </td> <td> 155.84 </td> <td> 6.61 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213554_s_at </td> <td> 213554_s_at </td> <td> AI928407 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI928407 /FEA=EST /DB_XREF=gi:5664371 /DB_XREF=est:wo96h09.x1 /CLONE=IMAGE:2463233 /UG=Hs.283690 hypothetical protein </td> <td> AI928407 </td> <td> CDV3 homolog (mouse) </td> <td> CDV3 </td> <td> 55573 </td> <td> NM_001134422 /// NM_001134423 /// NM_001282762 /// NM_001282763 /// NM_001282764 /// NM_001282765 /// NM_017548 /// XM_005247588 /// XM_005247589 /// XM_005247590 /// XM_005247591 /// XM_005247592 /// XM_005247594 </td> <td> 0008283 // cell proliferation // non-traceable author statement </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td>  </td> <td> -153.60 </td> <td> 158.88 </td> <td> -6.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 205055_at </td> <td> 205055_at </td> <td> NM_002208 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002208.3 /DEF=Homo sapiens integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide) (ITGAE), mRNA.  /FEA=mRNA /GEN=ITGAE /PROD=integrin, alpha E (antigen CD103, human mucosallymphocyte antigen 1; alpha polypeptide) /DB_XREF=gi:6007850 /UG=Hs.851 integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide) /FL=gb:L25851.2 gb:NM_002208.3 </td> <td> NM_002208 </td> <td> integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide) </td> <td> ITGAE </td> <td> 3682 </td> <td> NM_002208 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 122.62 </td> <td> 321.79 </td> <td> 6.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212623_at </td> <td> 212623_at </td> <td> AU153138 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU153138 /FEA=EST /DB_XREF=gi:11014659 /DB_XREF=est:AU153138 /CLONE=NT2RP3002507 /UG=Hs.174905 KIAA0033 protein </td> <td> AU153138 </td> <td> transmembrane protein 41B </td> <td> TMEM41B </td> <td> 440026 </td> <td> NM_001165030 /// NM_015012 /// NR_028491 </td> <td> 0007399 // nervous system development // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 87.80 </td> <td> 153.60 </td> <td> 6.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 221568_s_at </td> <td> 221568_s_at </td> <td> AF090900 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF090900.1 /DEF=Homo sapiens clone HQ0189 PRO0189 mRNA, complete cds. /FEA=mRNA /PROD=PRO0189 /DB_XREF=gi:6690176 /UG=Hs.91393 Homo sapiens cDNA: FLJ21887 fis, clone HEP03135, highly similar to AF090900 Homo sapiens clone HQ0189 PRO0189 mRNA /FL=gb:AF090900.1 </td> <td> AF090900 </td> <td> lin-7 homolog C (C. elegans) </td> <td> LIN7C </td> <td> 55327 </td> <td> NM_018362 </td> <td> 0002011 // morphogenesis of an epithelial sheet // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005911 // cell-cell junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097025 // MPP7-DLG1-LIN7 complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0097016 // L27 domain binding // inferred from direct assay </td> <td> 78.25 </td> <td> 72.83 </td> <td> 6.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 210479_s_at </td> <td> 210479_s_at </td> <td> L14611 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L14611.1 /DEF=Human transcription factor RZR-alpha mRNA, complete cds. /FEA=mRNA /PROD=transcription factor /DB_XREF=gi:348240 /UG=Hs.2156 RAR-related orphan receptor A /FL=gb:L14611.1 gb:NM_002943.1 gb:U04899.1 </td> <td> L14611 </td> <td> RAR-related orphan receptor A </td> <td> RORA </td> <td> 6095 </td> <td> NM_002943 /// NM_134260 /// NM_134261 /// NM_134262 /// XM_005254584 </td> <td> 0001525 // angiogenesis // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006805 // xenobiotic metabolic process // inferred from sequence or structural similarity /// 0006809 // nitric oxide biosynthetic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from mutant phenotype /// 0010906 // regulation of glucose metabolic process // inferred from sequence or structural similarity /// 0019218 // regulation of steroid metabolic process // inferred from sequence or structural similarity /// 0021702 // cerebellar Purkinje cell differentiation // inferred from electronic annotation /// 0021930 // cerebellar granule cell precursor proliferation // inferred from sequence or structural similarity /// 0030522 // intracellular receptor signaling pathway // inferred from direct assay /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0036315 // cellular response to sterol // inferred from direct assay /// 0036315 // cellular response to sterol // inferred from mutant phenotype /// 0042692 // muscle cell differentiation // inferred from mutant phenotype /// 0042753 // positive regulation of circadian rhythm // inferred from sequence or structural similarity /// 0043030 // regulation of macrophage activation // inferred from electronic annotation /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046068 // cGMP metabolic process // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from mutant phenotype /// 0060850 // regulation of transcription involved in cell fate commitment // inferred from sequence or structural similarity /// 0070328 // triglyceride homeostasis // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from mutant phenotype /// 0072539 // T-helper 17 cell differentiation // inferred from sequence or structural similarity /// 2000188 // regulation of cholesterol homeostasis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0001222 // transcription corepressor binding // inferred from physical interaction /// 0001223 // transcription coactivator binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008142 // oxysterol binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0098531 // direct ligand regulated sequence-specific DNA binding transcription factor activity // inferred from direct assay </td> <td> -69.00 </td> <td> 65.28 </td> <td> -6.57 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218962_s_at </td> <td> 218962_s_at </td> <td> NM_022484 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022484.1 /DEF=Homo sapiens hypothetical protein FLJ13576 (FLJ13576), mRNA. /FEA=mRNA /GEN=FLJ13576 /PROD=hypothetical protein FLJ13576 /DB_XREF=gi:11968036 /UG=Hs.79353 hypothetical protein FLJ13576 /FL=gb:NM_022484.1 </td> <td> NM_022484 </td> <td> transmembrane protein 168 </td> <td> TMEM168 </td> <td> 64418 </td> <td> NM_001287497 /// NM_022484 /// NR_109840 /// XM_005250527 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from direct assay </td> <td>  </td> <td> 74.08 </td> <td> 75.71 </td> <td> 6.56 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200886_s_at </td> <td> 200886_s_at </td> <td> NM_002629 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002629.1 /DEF=Homo sapiens phosphoglycerate mutase 1 (brain) (PGAM1), mRNA. /FEA=mRNA /GEN=PGAM1 /PROD=phosphoglycerate mutase 1 (brain) /DB_XREF=gi:4505752 /UG=Hs.181013 phosphoglycerate mutase 1 (brain) /FL=gb:BC000455.1 gb:NM_002629.1 gb:J04173.1 </td> <td> NM_002629 </td> <td> phosphoglycerate mutase 1 (brain) </td> <td> PGAM1 </td> <td> 5223 </td> <td> NM_002629 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from direct assay /// 0006096 // glycolytic process // traceable author statement /// 0006110 // regulation of glycolytic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0043456 // regulation of pentose-phosphate shunt // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045730 // respiratory burst // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004082 // bisphosphoglycerate mutase activity // inferred from electronic annotation /// 0004083 // bisphosphoglycerate 2-phosphatase activity // inferred from electronic annotation /// 0004619 // phosphoglycerate mutase activity // inferred from direct assay /// 0004619 // phosphoglycerate mutase activity // inferred from mutant phenotype /// 0004619 // phosphoglycerate mutase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016868 // intramolecular transferase activity, phosphotransferases // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> -593.40 </td> <td> 1610.80 </td> <td> -6.56 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218729_at </td> <td> 218729_at </td> <td> NM_020169 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020169.1 /DEF=Homo sapiens latexin protein (LXN), mRNA. /FEA=mRNA /GEN=LXN /PROD=latexin protein /DB_XREF=gi:9910395 /UG=Hs.109276 latexin protein /FL=gb:BC005346.1 gb:AF282626.1 gb:NM_020169.1 </td> <td> NM_020169 </td> <td> latexin </td> <td> LXN </td> <td> 56925 </td> <td> NM_020169 </td> <td> 0006954 // inflammatory response // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0050965 // detection of temperature stimulus involved in sensory perception of pain // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0008191 // metalloendopeptidase inhibitor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> 111.90 </td> <td> 281.45 </td> <td> 6.55 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200800_s_at </td> <td> 200800_s_at </td> <td> NM_005345 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005345.3 /DEF=Homo sapiens heat shock 70kD protein 1A (HSPA1A), mRNA. /FEA=mRNA /GEN=HSPA1A /PROD=heat shock 70kD protein 1A /DB_XREF=gi:5579469 /UG=Hs.8997 heat shock 70kD protein 1A /FL=gb:BC002453.1 gb:NM_005345.3 </td> <td> NM_005345 </td> <td> heat shock 70kDa protein 1A /// heat shock 70kDa protein 1B /// heat shock 70kDa protein 1-like </td> <td> HSPA1A /// HSPA1B /// HSPA1L </td> <td> 3303 /// 3304 /// 3305 </td> <td> NM_005345 /// NM_005346 /// NM_005527 /// XM_005249070 /// XM_005249071 /// XM_005249073 /// XM_005272813 /// XM_005272816 /// XM_005272817 /// XM_005274859 /// XM_005274861 /// XM_005274862 /// XM_005274970 /// XM_005274973 /// XM_005274974 /// XM_005275399 /// XM_005275401 /// XM_005275402 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006402 // mRNA catabolic process // inferred from direct assay /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0006986 // response to unfolded protein // traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010941 // regulation of cell death // inferred from mutant phenotype /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0034605 // cellular response to heat // inferred from direct assay /// 0042026 // protein refolding // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0045648 // positive regulation of erythrocyte differentiation // inferred from mutant phenotype /// 0060548 // negative regulation of cell death // inferred from mutant phenotype /// 0070370 // cellular heat acclimation // inferred from mutant phenotype /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype </td> <td> 0002199 // zona pellucida receptor complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005814 // centriole // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008180 // COP9 signalosome // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0044297 // cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001618 // virus receptor activity // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042623 // ATPase activity, coupled // inferred from direct assay /// 0044183 // protein binding involved in protein folding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051082 // unfolded protein binding // traceable author statement </td> <td> 90.77 </td> <td> 64.26 </td> <td> 6.54 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202949_s_at </td> <td> 202949_s_at </td> <td> NM_001450 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001450.1 /DEF=Homo sapiens four and a half LIM domains 2 (FHL2), mRNA. /FEA=mRNA /GEN=FHL2 /PROD=four and a half LIM domains 2 /DB_XREF=gi:4503722 /UG=Hs.8302 four and a half LIM domains 2 /FL=gb:U29332.1 gb:NM_001450.1 </td> <td> NM_001450 </td> <td> four and a half LIM domains 2 </td> <td> FHL2 </td> <td> 2274 </td> <td> NM_001039492 /// NM_001450 /// NM_201555 /// NM_201556 /// NM_201557 /// XM_005263901 /// XM_005263902 /// XM_005263903 /// XM_005263904 /// XM_005263906 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0009725 // response to hormone // inferred from mutant phenotype /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0055014 // atrial cardiac muscle cell development // inferred from electronic annotation /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0060347 // heart trabecula formation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0031430 // M band // inferred from electronic annotation </td> <td> 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // non-traceable author statement </td> <td> 266.35 </td> <td> 808.40 </td> <td> 6.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 207551_s_at </td> <td> 207551_s_at </td> <td> NM_006800 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006800.1 /DEF=Homo sapiens male-specific lethal-3 (Drosophila)-like 1 (MSL3L1), mRNA.  /FEA=mRNA /GEN=MSL3L1 /PROD=male-specific lethal-3 (Drosophila)-like 1 /DB_XREF=gi:5803103 /UG=Hs.88764 male-specific lethal-3 (Drosophila)-like 1 /FL=gb:AF117065.1 gb:NM_006800.1 </td> <td> NM_006800 </td> <td> male-specific lethal 3 homolog (Drosophila) </td> <td> MSL3 </td> <td> 10943 </td> <td> NM_001193270 /// NM_001282174 /// NM_006800 /// NM_078628 /// NM_078629 /// NM_078630 /// XM_005274440 /// XM_006724461 </td> <td> 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043984 // histone H4-K16 acetylation // inferred from direct assay </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0072487 // MSL complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0035064 // methylated histone binding // inferred from direct assay </td> <td> -109.55 </td> <td> 270.80 </td> <td> -6.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 219120_at </td> <td> 219120_at </td> <td> NM_025203 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025203.1 /DEF=Homo sapiens hypothetical protein FLJ21945 (FLJ21945), mRNA. /FEA=mRNA /GEN=FLJ21945 /PROD=hypothetical protein FLJ21945 /DB_XREF=gi:13376797 /UG=Hs.24624 hypothetical protein FLJ21945 /FL=gb:NM_025203.1 </td> <td> NM_025203 </td> <td> chromosome 2 open reading frame 44 </td> <td> C2orf44 </td> <td> 80304 </td> <td> NM_001142319 /// NM_025203 </td> <td>  </td> <td>  </td> <td>  </td> <td> 54.80 </td> <td> 32.17 </td> <td> 6.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 221123_x_at </td> <td> 221123_x_at </td> <td> NM_018660 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018660.1 /DEF=Homo sapiens papillomavirus regulatory factor PRF-1 (LOC55893), mRNA.  /FEA=mRNA /GEN=LOC55893 /PROD=papillomavirus regulatory factor PRF-1 /DB_XREF=gi:8923886 /UG=Hs.27410 papillomavirus regulatory factor PRF-1 /FL=gb:AF263928.1 gb:NM_018660.1 </td> <td> NM_018660 </td> <td> F-box protein 16 /// zinc finger protein 395 </td> <td> FBXO16 /// ZNF395 </td> <td> 55893 /// 157574 </td> <td> NM_001258211 /// NM_018660 /// NM_172366 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred by curator </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -58.58 </td> <td> 43.09 </td> <td> -6.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209939_x_at </td> <td> 209939_x_at </td> <td> AF005775 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF005775.1 /DEF=Homo sapiens caspase-like apoptosis regulatory protein 2 (clarp) mRNA, alternatively spliced, complete cds.  /FEA=mRNA /GEN=clarp /PROD=caspase-like apoptosis regulatory protein 2 /DB_XREF=gi:2286146 /UG=Hs.195175 CASP8 and FADD-like apoptosis regulator /FL=gb:AF005775.1 </td> <td> AF005775 </td> <td> CASP8 and FADD-like apoptosis regulator </td> <td> CFLAR </td> <td> 8837 </td> <td> NM_001127183 /// NM_001127184 /// NM_001202515 /// NM_001202516 /// NM_001202517 /// NM_001202518 /// NM_001202519 /// NM_003879 /// XM_005246935 /// XM_005246936 /// XM_005246937 /// XM_005246938 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from sequence or structural similarity /// 0014732 // skeletal muscle atrophy // inferred from sequence or structural similarity /// 0014842 // regulation of satellite cell proliferation // inferred from sequence or structural similarity /// 0014866 // skeletal myofibril assembly // inferred from sequence or structural similarity /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043403 // skeletal muscle tissue regeneration // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0060544 // regulation of necroptotic process // inferred from direct assay /// 0097190 // apoptotic signaling pathway // traceable author statement /// 1901740 // negative regulation of myoblast fusion // inferred from sequence or structural similarity /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0031264 // death-inducing signaling complex // inferred from direct assay /// 0031265 // CD95 death-inducing signaling complex // inferred from electronic annotation /// 0097342 // ripoptosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0004197 // cysteine-type endopeptidase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // inferred from direct assay /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0035877 // death effector domain binding // not recorded </td> <td> -301.90 </td> <td> 703.55 </td> <td> -6.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212640_at </td> <td> 212640_at </td> <td> AV712602 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV712602 /FEA=EST /DB_XREF=gi:10731908 /DB_XREF=est:AV712602 /CLONE=DCAACD04 /UG=Hs.5957 Homo sapiens clone 24416 mRNA sequence </td> <td> AV712602 </td> <td> protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b </td> <td> PTPLB </td> <td> 201562 </td> <td> NM_198402 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016829 // lyase activity // inferred from electronic annotation </td> <td> 72.47 </td> <td> 106.71 </td> <td> 6.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218888_s_at </td> <td> 218888_s_at </td> <td> NM_018092 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018092.1 /DEF=Homo sapiens hypothetical protein FLJ10430 (FLJ10430), mRNA. /FEA=mRNA /GEN=FLJ10430 /PROD=hypothetical protein FLJ10430 /DB_XREF=gi:8922419 /UG=Hs.6823 hypothetical protein FLJ10430 /FL=gb:NM_018092.1 </td> <td> NM_018092 </td> <td> neuropilin (NRP) and tolloid (TLL)-like 2 </td> <td> NETO2 </td> <td> 81831 </td> <td> NM_001201477 /// NM_018092 /// XM_006721289 /// XM_006721290 /// XM_006721291 /// XM_006721292 </td> <td> 2000312 // regulation of kainate selective glutamate receptor activity // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032983 // kainate selective glutamate receptor complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 134.68 </td> <td> 183.91 </td> <td> 6.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 217734_s_at </td> <td> 217734_s_at </td> <td> NM_018031 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018031.2 /DEF=Homo sapiens WD repeat domain 6 (WDR6), mRNA. /FEA=mRNA /GEN=WDR6 /PROD=WD repeat domain 6 /DB_XREF=gi:11072092 /UG=Hs.8737 WD repeat domain 6 /FL=gb:NM_018031.2 gb:AF099100.1 </td> <td> NM_018031 </td> <td> WD repeat domain 6 </td> <td> WDR6 </td> <td> 11180 </td> <td> NM_018031 /// XM_005264837 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010507 // negative regulation of autophagy // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0008180 // COP9 signalosome // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 122.70 </td> <td> 96.05 </td> <td> 6.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 45297_at </td> <td> 45297_at </td> <td> AI417917 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI417917:tg55d04.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2112679 /clone_end=3' /gb=AI417917 /gi=4261421 /ug=Hs.20733 /len=662 </td> <td> AI417917 </td> <td> EH-domain containing 2 </td> <td> EHD2 </td> <td> 30846 </td> <td> NM_014601 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from genetic interaction /// 0072659 // protein localization to plasma membrane // inferred from sequence or structural similarity /// 1901741 // positive regulation of myoblast fusion // inferred from sequence or structural similarity /// 2001137 // positive regulation of endocytic recycling // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005901 // caveola // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 202.15 </td> <td> 313.32 </td> <td> 6.51 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218633_x_at </td> <td> 218633_x_at </td> <td> NM_018394 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018394.1 /DEF=Homo sapiens hypothetical protein FLJ11342 (FLJ11342), mRNA. /FEA=mRNA /GEN=FLJ11342 /PROD=hypothetical protein FLJ11342 /DB_XREF=gi:8923000 /UG=Hs.266514 hypothetical protein FLJ11342 /FL=gb:NM_018394.1 </td> <td> NM_018394 </td> <td> abhydrolase domain containing 10 </td> <td> ABHD10 </td> <td> 55347 </td> <td> NM_001272069 /// NM_018394 /// NR_073570 /// NR_073571 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0019391 // glucuronoside catabolic process // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay </td> <td> 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from direct assay /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 76.80 </td> <td> 141.72 </td> <td> 6.50 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208776_at </td> <td> 208776_at </td> <td> BF432873 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF432873 /FEA=EST /DB_XREF=gi:11445036 /DB_XREF=est:7n28a02.x1 /CLONE=IMAGE:3565730 /UG=Hs.90744 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 /FL=gb:BC000437.1 gb:BC004430.1 gb:AB003102.1 gb:AF001212.1 gb:NM_002815.1 </td> <td> BF432873 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 </td> <td> PSMD11 </td> <td> 5717 </td> <td> NM_001270482 /// NM_002815 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043248 // proteasome assembly // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0048863 // stem cell differentiation // inferred from mutant phenotype /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022624 // proteasome accessory complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 86.28 </td> <td> 71.56 </td> <td> 6.50 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212992_at </td> <td> 212992_at </td> <td> AI935123 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI935123 /FEA=EST /DB_XREF=gi:5673993 /DB_XREF=est:wp13h09.x1 /CLONE=IMAGE:2464769 /UG=Hs.57548 ESTs </td> <td> AI935123 </td> <td> AHNAK nucleoprotein 2 </td> <td> AHNAK2 </td> <td> 113146 </td> <td> NM_138420 /// XM_005267299 </td> <td> 0001778 // plasma membrane repair // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030315 // T-tubule // non-traceable author statement /// 0030659 // cytoplasmic vesicle membrane // inferred from sequence or structural similarity /// 0042383 // sarcolemma // non-traceable author statement /// 0043034 // costamere // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 156.35 </td> <td> 211.22 </td> <td> 6.50 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212337_at </td> <td> 212337_at </td> <td> AI687738 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI687738 /FEA=EST /DB_XREF=gi:4899032 /DB_XREF=est:tp93g08.x1 /CLONE=IMAGE:2206910 /UG=Hs.699 peptidylprolyl isomerase B (cyclophilin B) </td> <td> AI687738 </td> <td> taurine up-regulated 1 (non-protein coding) </td> <td> TUG1 </td> <td> 55000 </td> <td> NR_002323 /// NR_110492 /// NR_110493 </td> <td>  </td> <td>  </td> <td>  </td> <td> 115.25 </td> <td> 219.78 </td> <td> 6.49 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212217_at </td> <td> 212217_at </td> <td> AU154782 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU154782 /FEA=EST /DB_XREF=gi:11016303 /DB_XREF=est:AU154782 /CLONE=NT2RP4002085 /UG=Hs.110 putative L-type neutral amino acid transporter </td> <td> AU154782 </td> <td> prolyl endopeptidase-like </td> <td> PREPL </td> <td> 9581 </td> <td> NM_001042385 /// NM_001042386 /// NM_001171603 /// NM_001171606 /// NM_001171613 /// NM_001171617 /// NM_006036 /// XM_005264653 /// XM_005264654 /// XM_005264655 /// XM_005264657 /// XM_005264658 /// XM_005264659 /// XM_005264660 /// XM_006712151 /// XM_006712152 </td> <td> 0006508 // proteolysis // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation </td> <td> 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0070008 // serine-type exopeptidase activity // inferred from electronic annotation </td> <td> 51.78 </td> <td> 62.69 </td> <td> 6.49 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213400_s_at </td> <td> 213400_s_at </td> <td> AV753028 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV753028 /FEA=EST /DB_XREF=gi:10910876 /DB_XREF=est:AV753028 /CLONE=NPDBCD07 /UG=Hs.76536 transducin (beta)-like 1 </td> <td> AV753028 </td> <td> transducin (beta)-like 1X-linked </td> <td> TBL1X </td> <td> 6907 </td> <td> NM_001139466 /// NM_001139467 /// NM_001139468 /// NM_005647 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006508 // proteolysis // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0043627 // response to estrogen // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from genetic interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay </td> <td> -70.35 </td> <td> 130.25 </td> <td> -6.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218681_s_at </td> <td> 218681_s_at </td> <td> NM_022044 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022044.1 /DEF=Homo sapiens stromal cell-derived factor 2-like 1 (SDF2L1), mRNA. /FEA=mRNA /GEN=SDF2L1 /PROD=stromal cell-derived factor 2-like 1 /DB_XREF=gi:11545742 /UG=Hs.303116 stromal cell-derived factor 2-like 1 /FL=gb:AB043007.1 gb:NM_022044.1 </td> <td> NM_022044 </td> <td> stromal cell-derived factor 2-like 1 </td> <td> SDF2L1 </td> <td> 23753 </td> <td> NM_022044 </td> <td> 0006208 // pyrimidine nucleobase catabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation </td> <td> 76.25 </td> <td> 130.10 </td> <td> 6.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212519_at </td> <td> 212519_at </td> <td> AL518159 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL518159 /FEA=EST /DB_XREF=gi:12781652 /DB_XREF=est:AL518159 /CLONE=CS0DA010YD02 (5 prime) /UG=Hs.7766 ubiquitin-conjugating enzyme E2E 1 (homologous to yeast UBC45) /FL=gb:NM_003341.1 </td> <td> AL518159 </td> <td> ubiquitin-conjugating enzyme E2E 1 </td> <td> UBE2E1 </td> <td> 7324 </td> <td> NM_001202476 /// NM_003341 /// NM_182666 /// XM_005265431 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010390 // histone monoubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0032020 // ISG15-protein conjugation // inferred from direct assay /// 0033523 // histone H2B ubiquitination // inferred from direct assay /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0042296 // ISG15 ligase activity // inferred from direct assay </td> <td> -216.17 </td> <td> 787.44 </td> <td> -6.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 203002_at </td> <td> 203002_at </td> <td> NM_016201 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016201.1 /DEF=Homo sapiens Leman coiled-coil protein (LCCP), mRNA. /FEA=mRNA /GEN=LCCP /PROD=Leman coiled-coil protein /DB_XREF=gi:7705577 /UG=Hs.92186 Leman coiled-coil protein /FL=gb:AF175966.1 gb:NM_016201.1 </td> <td> NM_016201 </td> <td> angiomotin like 2 </td> <td> AMOTL2 </td> <td> 51421 </td> <td> NM_001278683 /// NM_001278685 /// NM_016201 /// XM_005247520 /// XM_006713654 /// XM_006713655 </td> <td> 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0035329 // hippo signaling // traceable author statement </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005923 // tight junction // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> 120.48 </td> <td> 231.06 </td> <td> 6.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212088_at </td> <td> 212088_at </td> <td> BF570122 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF570122 /FEA=EST /DB_XREF=gi:11643834 /DB_XREF=est:602185972T1 /CLONE=IMAGE:4310632 /UG=Hs.75353 KIAA0123 protein </td> <td> BF570122 </td> <td> peptidase (mitochondrial processing) alpha </td> <td> PMPCA </td> <td> 23203 </td> <td> NM_001282944 /// NM_001282946 /// NM_015160 /// XM_005266059 </td> <td> 0006508 // proteolysis // traceable author statement /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 82.57 </td> <td> 83.21 </td> <td> 6.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201420_s_at </td> <td> 201420_s_at </td> <td> BF975273 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF975273 /FEA=EST /DB_XREF=gi:12342488 /DB_XREF=est:602244783F1 /CLONE=IMAGE:4335765 /UG=Hs.11039 hypothetical protein MGC2722 /FL=gb:BC001679.1 gb:NM_024102.1 </td> <td> BF975273 </td> <td> WD repeat domain 77 </td> <td> WDR77 </td> <td> 79084 </td> <td> NM_024102 </td> <td> 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement /// 0060528 // secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development // inferred from electronic annotation /// 0060770 // negative regulation of epithelial cell proliferation involved in prostate gland development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from genetic interaction /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from genetic interaction /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0034709 // methylosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from genetic interaction </td> <td> 82.63 </td> <td> 159.64 </td> <td> 6.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202561_at </td> <td> 202561_at </td> <td> AF070613 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF070613.1 /DEF=Homo sapiens clone 24585 mRNA sequence. /FEA=mRNA /DB_XREF=gi:3387995 /UG=Hs.131814 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase /FL=gb:AF082556.1 gb:NM_003747.1 </td> <td> AF070613 </td> <td> tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase </td> <td> TNKS </td> <td> 8658 </td> <td> NM_003747 /// XM_006716263 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006471 // protein ADP-ribosylation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007052 // mitotic spindle organization // traceable author statement /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0032210 // regulation of telomere maintenance via telomerase // inferred by curator /// 0032212 // positive regulation of telomere maintenance via telomerase // inferred from direct assay /// 0032212 // positive regulation of telomere maintenance via telomerase // inferred from mutant phenotype /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051225 // spindle assembly // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0070198 // protein localization to chromosome, telomeric region // inferred from mutant phenotype /// 0070212 // protein poly-ADP-ribosylation // inferred from direct assay /// 0070213 // protein auto-ADP-ribosylation // inferred from direct assay /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0000242 // pericentriolar material // traceable author statement /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000781 // chromosome, telomeric region // inferred from direct assay /// 0000784 // nuclear chromosome, telomeric region // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005643 // nuclear pore // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0031965 // nuclear membrane // traceable author statement </td> <td> 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 72.43 </td> <td> 96.04 </td> <td> 6.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202615_at </td> <td> 202615_at </td> <td> BF222895 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF222895 /FEA=EST /DB_XREF=gi:11130072 /DB_XREF=est:7q24f10.x1 /CLONE=IMAGE:3699235 /UG=Hs.296261 guanine nucleotide binding protein (G protein), q polypeptide /FL=gb:U43083.1 gb:AF329284.1 gb:AF011496.1 gb:NM_002072.1 </td> <td> BF222895 </td> <td> guanine nucleotide binding protein (G protein), q polypeptide </td> <td> GNAQ </td> <td> 2776 </td> <td> NM_002072 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001508 // action potential // not recorded /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // not recorded /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007215 // glutamate receptor signaling pathway // not recorded /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0016322 // neuron remodeling // inferred from electronic annotation /// 0021884 // forebrain neuron development // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0035412 // regulation of catenin import into nucleus // inferred from mutant phenotype /// 0042711 // maternal behavior // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0045634 // regulation of melanocyte differentiation // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0060158 // phospholipase C-activating dopamine receptor signaling pathway // not recorded </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // not recorded /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // not recorded /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // not recorded /// 0005096 // GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031826 // type 2A serotonin receptor binding //  /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 185.78 </td> <td> 350.91 </td> <td> 6.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 219563_at </td> <td> 219563_at </td> <td> NM_024633 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024633.1 /DEF=Homo sapiens hypothetical protein FLJ21276 (FLJ21276), mRNA. /FEA=mRNA /GEN=FLJ21276 /PROD=hypothetical protein FLJ21276 /DB_XREF=gi:13375863 /UG=Hs.41502 hypothetical protein FLJ21276 /FL=gb:NM_024633.1 </td> <td> NM_024633 </td> <td> long intergenic non-protein coding RNA 341 /// spectrin repeat containing, nuclear envelope family member 3 </td> <td> LINC00341 /// SYNE3 </td> <td> 79686 /// 161176 </td> <td> NM_024633 /// NM_152592 /// NR_026779 /// XM_005267376 /// XM_005267377 /// XM_006720063 /// XM_006720064 /// XM_006720065 /// XM_006720066 /// XM_006720067 </td> <td> 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0090150 // establishment of protein localization to membrane // inferred from direct assay /// 0090286 // cytoskeletal anchoring at nuclear membrane // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0034993 // SUN-KASH complex // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0051015 // actin filament binding // inferred from mutant phenotype </td> <td> 53.87 </td> <td> 54.34 </td> <td> 6.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213093_at </td> <td> 213093_at </td> <td> AI471375 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI471375 /FEA=EST /DB_XREF=gi:4333465 /DB_XREF=est:tm10c12.x1 /CLONE=IMAGE:2156182 /UG=Hs.80206 glucose-6-phosphate dehydrogenase </td> <td> AI471375 </td> <td> protein kinase C, alpha </td> <td> PRKCA </td> <td> 5578 </td> <td> NM_002737 /// XM_006721972 /// XR_243672 /// XR_243673 </td> <td> 0000188 // inactivation of MAPK activity // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001816 // cytokine production // inferred from mutant phenotype /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0002159 // desmosome assembly // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006098 // pentose-phosphate shunt // inferred from direct assay /// 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0006098 // pentose-phosphate shunt // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006695 // cholesterol biosynthetic process // inferred from mutant phenotype /// 0006739 // NADP metabolic process // inferred from direct assay /// 0006740 // NADPH regeneration // inferred from mutant phenotype /// 0006749 // glutathione metabolic process // inferred from mutant phenotype /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007190 // activation of adenylate cyclase activity // inferred from sequence or structural similarity /// 0007194 // negative regulation of adenylate cyclase activity // inferred from sequence or structural similarity /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009051 // pentose-phosphate shunt, oxidative branch // inferred from electronic annotation /// 0009051 // pentose-phosphate shunt, oxidative branch // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from sequence or structural similarity /// 0010734 // negative regulation of protein glutathionylation // inferred from mutant phenotype /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019322 // pentose biosynthetic process // inferred from direct assay /// 0021762 // substantia nigra development // inferred from expression pattern /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0031666 // positive regulation of lipopolysaccharide-mediated signaling pathway // inferred from mutant phenotype /// 0032094 // response to food // inferred from electronic annotation /// 0034351 // negative regulation of glial cell apoptotic process // inferred from mutant phenotype /// 0034599 // cellular response to oxidative stress // inferred from mutant phenotype /// 0035408 // histone H3-T6 phosphorylation // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0036289 // peptidyl-serine autophosphorylation // inferred from electronic annotation /// 0043249 // erythrocyte maturation // inferred from mutant phenotype /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045651 // positive regulation of macrophage differentiation // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045785 // positive regulation of cell adhesion // inferred from mutant phenotype /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0046325 // negative regulation of glucose import // inferred from electronic annotation /// 0046390 // ribose phosphate biosynthetic process // inferred from mutant phenotype /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation /// 0051156 // glucose 6-phosphate metabolic process // inferred from direct assay /// 0051156 // glucose 6-phosphate metabolic process // inferred from electronic annotation /// 0051156 // glucose 6-phosphate metabolic process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070555 // response to interleukin-1 // inferred from mutant phenotype /// 0071322 // cellular response to carbohydrate stimulus // inferred from electronic annotation /// 0090330 // regulation of platelet aggregation // inferred from direct assay /// 0097190 // apoptotic signaling pathway // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // inferred from electronic annotation /// 2000707 // positive regulation of dense core granule biogenesis // inferred from sequence or structural similarity </td> <td> 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009898 // cytoplasmic side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004345 // glucose-6-phosphate dehydrogenase activity // inferred from direct assay /// 0004345 // glucose-6-phosphate dehydrogenase activity // inferred from electronic annotation /// 0004345 // glucose-6-phosphate dehydrogenase activity // inferred from mutant phenotype /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from sequence or structural similarity /// 0004698 // calcium-dependent protein kinase C activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005536 // glucose binding // inferred from direct assay /// 0005536 // glucose binding // inferred from electronic annotation /// 0005536 // glucose binding // inferred from mutant phenotype /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from direct assay /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0035403 // histone kinase activity (H3-T6 specific) // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from direct assay /// 0050661 // NADP binding // inferred from electronic annotation </td> <td> 96.62 </td> <td> 123.21 </td> <td> 6.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200808_s_at </td> <td> 200808_s_at </td> <td> NM_003461 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003461.1 /DEF=Homo sapiens zyxin (ZYX), mRNA. /FEA=mRNA /GEN=ZYX /PROD=zyxin /DB_XREF=gi:4508046 /UG=Hs.75873 zyxin /FL=gb:NM_003461.1 </td> <td> NM_003461 </td> <td> zyxin </td> <td> ZYX </td> <td> 7791 </td> <td> NM_001010972 /// NM_003461 /// XM_005250052 /// XM_005250053 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 194.80 </td> <td> 666.50 </td> <td> 6.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218082_s_at </td> <td> 218082_s_at </td> <td> NM_014517 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014517.1 /DEF=Homo sapiens upstream binding protein 1 (LBP-1a) (UBP1), mRNA. /FEA=mRNA /GEN=UBP1 /PROD=upstream binding protein 1 (LBP-1a) /DB_XREF=gi:7657668 /UG=Hs.28423 upstream binding protein 1 (LBP-1a) /FL=gb:AF198487.1 gb:NM_014517.1 </td> <td> NM_014517 </td> <td> upstream binding protein 1 (LBP-1a) </td> <td> UBP1 </td> <td> 7342 </td> <td> NM_001128160 /// NM_001128161 /// NM_014517 /// XM_006713322 /// XR_427288 /// XR_427289 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement </td> <td> 151.35 </td> <td> 279.82 </td> <td> 6.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202169_s_at </td> <td> 202169_s_at </td> <td> AF302110 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF302110.1 /DEF=Homo sapiens alpha-aminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase mRNA, complete cds.  /FEA=mRNA /PROD=alpha-aminoadipic semialdehydedehydrogenase-phosphopantetheinyl transferase /DB_XREF=gi:11120434 /UG=Hs.64595 aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase /FL=gb:AF302110.1 gb:AF136978.1 gb:AF151838.1 gb:AF151057.1 gb:NM_015423.1 gb:AF201943.1 </td> <td> AF302110 </td> <td> aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase </td> <td> AASDHPPT </td> <td> 60496 </td> <td> NM_015423 </td> <td> 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0009059 // macromolecule biosynthetic process // inferred from electronic annotation /// 0015939 // pantothenate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008897 // holo-[acyl-carrier-protein] synthase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 137.98 </td> <td> 354.56 </td> <td> 6.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212642_s_at </td> <td> 212642_s_at </td> <td> AL023584 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL023584 /DEF=Human DNA sequence from clone 67K17 on chromosome 6q24.1-24.3. Contains the HIVEP2 (Schnurri-2) gene for HIV type 1 Enhancer-binding Protein 2, and a possible pseudogene in an intron of this gene. Contains STSs and GSSs and an AAAT repeat polymorp... /FEA=mRNA /DB_XREF=gi:3790154 /UG=Hs.75063 human immunodeficiency virus type I enhancer-binding protein 2 /FL=gb:NM_006734.1 </td> <td> AL023584 </td> <td> human immunodeficiency virus type I enhancer binding protein 2 </td> <td> HIVEP2 </td> <td> 3097 </td> <td> NM_006734 /// XM_005266957 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -154.90 </td> <td> 99.75 </td> <td> -6.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 217795_s_at </td> <td> 217795_s_at </td> <td> W74580 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W74580 /FEA=EST /DB_XREF=gi:1384812 /DB_XREF=est:zd76g10.s1 /CLONE=IMAGE:346626 /UG=Hs.323193 hypothetical protein MGC3222 /FL=gb:AL136916.1 gb:BC003125.1 gb:NM_024334.1 </td> <td> W74580 </td> <td> transmembrane protein 43 </td> <td> TMEM43 </td> <td> 79188 </td> <td> NM_024334 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -125.02 </td> <td> 373.81 </td> <td> -6.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202878_s_at </td> <td> 202878_s_at </td> <td> NM_012072 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012072.2 /DEF=Homo sapiens complement component C1q receptor (C1QR), mRNA. /FEA=mRNA /GEN=C1QR /PROD=complement component C1q receptor /DB_XREF=gi:11496985 /UG=Hs.97199 complement component C1q receptor /FL=gb:NM_012072.2 gb:U94333.1 </td> <td> NM_012072 </td> <td> CD93 molecule </td> <td> CD93 </td> <td> 22918 </td> <td> NM_012072 </td> <td> 0006909 // phagocytosis // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042116 // macrophage activation // non-traceable author statement </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred by curator /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation </td> <td> 0001849 // complement component C1q binding // inferred from direct assay /// 0004872 // receptor activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> 472.43 </td> <td> 1576.84 </td> <td> 6.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 222157_s_at </td> <td> 222157_s_at </td> <td> AB040882 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB040882.1 /DEF=Homo sapiens mRNA for KIAA1449 protein, partial cds. /FEA=mRNA /GEN=KIAA1449 /PROD=KIAA1449 protein /DB_XREF=gi:7959156 /UG=Hs.109778 KIAA1449 protein </td> <td> AB040882 </td> <td> WD repeat domain 48 </td> <td> WDR48 </td> <td> 57599 </td> <td> NM_020839 /// XM_005265346 </td> <td> 0016032 // viral process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -60.62 </td> <td> 93.69 </td> <td> -6.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202691_at </td> <td> 202691_at </td> <td> NM_006938 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006938.1 /DEF=Homo sapiens small nuclear ribonucleoprotein D1 polypeptide (16kD) (SNRPD1), mRNA.  /FEA=mRNA /GEN=SNRPD1 /PROD=small nuclear ribonucleoprotein D1 polypeptide(16kD) /DB_XREF=gi:5902101 /UG=Hs.86948 small nuclear ribonucleoprotein D1 polypeptide (16kD) /FL=gb:BC001721.1 gb:J03798.1 gb:NM_006938.1 </td> <td> NM_006938 </td> <td> small nuclear ribonucleoprotein D1 polypeptide 16kDa </td> <td> SNRPD1 </td> <td> 6632 </td> <td> NM_001291916 /// NM_006938 </td> <td> 0000245 // spliceosomal complex assembly // traceable author statement /// 0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005685 // U1 snRNP // inferred from direct assay /// 0005687 // U4 snRNP // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement /// 0034709 // methylosome // inferred from direct assay /// 0034715 // pICln-Sm protein complex // inferred from direct assay /// 0034719 // SMN-Sm protein complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 62.78 </td> <td> 85.14 </td> <td> 6.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209140_x_at </td> <td> 209140_x_at </td> <td> L42024 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L42024.1 /DEF=Homo sapiens MHC HLA-B39 mRNA, complete cds. /FEA=mRNA /GEN=HLA-B39 /PROD=major histocompatibility complex /DB_XREF=gi:804748 /UG=Hs.77961 major histocompatibility complex, class I, B /FL=gb:L37880.1 gb:U29057.1 gb:U29480.1 gb:U63653.1 gb:D85761.1 gb:D85762.1 gb:M77774.1 gb:M77778.1 gb:M77777.1 gb:M16102.1 gb:M84380.1 gb:M32317.1 gb:M24033.1 gb:L17005.1 gb:U88407.1 gb:U29083.1 gb:L24373.1 gb:U03698.1 gb:U04787.1 gb:U04244.1 gb:U04245.1 gb:NM_005514.1 gb:L33922.1 gb:AF189017.1 gb:U21052.1 gb:U21053.1 gb:L36318.1 gb:U09912.1 gb:L42024.1 </td> <td> L42024 </td> <td> major histocompatibility complex, class I, B </td> <td> HLA-B </td> <td> 3106 </td> <td> NM_005514 /// XM_005249043 /// XM_005275100 /// XM_005275238 /// XM_005275376 /// XM_005275377 /// XM_005275535 /// XM_006725904 /// XM_006725905 /// XR_246962 /// XR_427830 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from direct assay /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002486 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent // inferred from direct assay /// 0002667 // regulation of T cell anergy // inferred from mutant phenotype /// 0006952 // defense response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016045 // detection of bacterium // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032655 // regulation of interleukin-12 production // inferred from mutant phenotype /// 0032675 // regulation of interleukin-6 production // inferred from mutant phenotype /// 0042270 // protection from natural killer cell mediated cytotoxicity // inferred from direct assay /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 2001198 // regulation of dendritic cell differentiation // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005102 // receptor binding // not recorded /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0042605 // peptide antigen binding // not recorded /// 0042605 // peptide antigen binding // inferred from direct assay /// 0042605 // peptide antigen binding // inferred from sequence or structural similarity /// 0046977 // TAP binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> -381.55 </td> <td> 792.85 </td> <td> -6.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 220911_s_at </td> <td> 220911_s_at </td> <td> NM_025081 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025081.1 /DEF=Homo sapiens KIAA1305 protein (KIAA1305), mRNA. /FEA=mRNA /GEN=KIAA1305 /PROD=hypothetical protein FLJ11811 /DB_XREF=gi:13378146 /UG=Hs.288348 KIAA1305 protein /FL=gb:NM_025081.1 </td> <td> NM_025081 </td> <td> NYN domain and retroviral integrase containing </td> <td> NYNRIN </td> <td> 57523 </td> <td> NM_025081 </td> <td> 0015074 // DNA integration // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation </td> <td> 76.65 </td> <td> 50.95 </td> <td> 6.43 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209308_s_at </td> <td> 209308_s_at </td> <td> BC002461 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002461.1 /DEF=Homo sapiens, BCL2adenovirus E1B 19kD-interacting protein 2, clone MGC:1529, mRNA, complete cds.  /FEA=mRNA /PROD=BCL2adenovirus E1B 19kD-interacting protein 2 /DB_XREF=gi:12803290 /UG=Hs.155596 BCL2adenovirus E1B 19kD-interacting protein 2 /FL=gb:BC002461.1 </td> <td> BC002461 </td> <td> BCL2/adenovirus E1B 19kDa interacting protein 2 </td> <td> BNIP2 </td> <td> 663 </td> <td> NM_004330 /// XM_005254607 </td> <td> 0001824 // blastocyst development // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from physical interaction /// 0042692 // muscle cell differentiation // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0051057 // positive regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051297 // centrosome organization // inferred from electronic annotation </td> <td> 0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement /// 0031616 // spindle pole centrosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // traceable author statement /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // not recorded </td> <td> -108.60 </td> <td> 211.08 </td> <td> -6.43 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218632_at </td> <td> 218632_at </td> <td> NM_024602 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024602.1 /DEF=Homo sapiens hypothetical protein FLJ21156 (FLJ21156), mRNA. /FEA=mRNA /GEN=FLJ21156 /PROD=hypothetical protein FLJ21156 /DB_XREF=gi:13375804 /UG=Hs.26058 hypothetical protein FLJ21156 /FL=gb:NM_024602.1 </td> <td> NM_024602 </td> <td> HECT domain containing E3 ubiquitin protein ligase 3 </td> <td> HECTD3 </td> <td> 79654 </td> <td> NM_024602 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay </td> <td> 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from electronic annotation </td> <td> 80.58 </td> <td> 132.26 </td> <td> 6.43 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200976_s_at </td> <td> 200976_s_at </td> <td> NM_006024 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006024.2 /DEF=Homo sapiens Tax1 (human T-cell leukemia virus type I) binding protein 1 (TAX1BP1), mRNA.  /FEA=mRNA /GEN=TAX1BP1 /PROD=Tax1 (human T-cell leukemia virus type I)binding protein 1 /DB_XREF=gi:5803188 /UG=Hs.5437 Tax1 (human T-cell leukemia virus type I) binding protein 1 /FL=gb:U33821.2 gb:NM_006024.2 gb:AF090891.1 gb:AF268075.1 </td> <td> NM_006024 </td> <td> Tax1 (human T-cell leukemia virus type I) binding protein 1 </td> <td> TAX1BP1 </td> <td> 8887 </td> <td> NM_001079864 /// NM_001206901 /// NM_001206902 /// NM_006024 /// XM_005249900 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from sequence or structural similarity </td> <td> -176.12 </td> <td> 417.56 </td> <td> -6.43 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202939_at </td> <td> 202939_at </td> <td> NM_005857 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005857.1 /DEF=Homo sapiens zinc metalloproteinase, STE24 (yeast, homolog) (ZMPSTE24), mRNA.  /FEA=mRNA /GEN=ZMPSTE24 /PROD=zinc metalloproteinase, STE24 (yeast, homolog) /DB_XREF=gi:5032128 /UG=Hs.25846 zinc metalloproteinase, STE24 (yeast, homolog) /FL=gb:AB016068.1 gb:AF064867.1 gb:NM_005857.1 </td> <td> NM_005857 </td> <td> zinc metallopeptidase STE24 </td> <td> ZMPSTE24 </td> <td> 10269 </td> <td> NM_005857 </td> <td> 0006508 // proteolysis // traceable author statement /// 0006998 // nuclear envelope organization // inferred from electronic annotation /// 0030327 // prenylated protein catabolic process // inferred from electronic annotation /// 0071586 // CAAX-box protein processing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008235 // metalloexopeptidase activity // traceable author statement /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 194.98 </td> <td> 430.86 </td> <td> 6.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212068_s_at </td> <td> 212068_s_at </td> <td> AB011087 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB011087.1 /DEF=Homo sapiens mRNA for KIAA0515 protein, partial cds. /FEA=mRNA /GEN=KIAA0515 /PROD=KIAA0515 protein /DB_XREF=gi:3043553 /UG=Hs.108945 KIAA0515 protein </td> <td> AB011087 </td> <td> proline-rich coiled-coil 2B </td> <td> PRRC2B </td> <td> 84726 </td> <td> NM_013318 /// NM_032640 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 115.45 </td> <td> 186.03 </td> <td> 6.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 214651_s_at </td> <td> 214651_s_at </td> <td> U41813 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U41813.1 /DEF=Human class I homeoprotein (HOXA9) mRNA, partial cds. /FEA=mRNA /GEN=HOXA9 /PROD=HOXA9 /DB_XREF=gi:1184168 /UG=Hs.127428 homeo box A9 /FL=gb:NM_002142.1 </td> <td> U41813 </td> <td> HOXA10-HOXA9 readthrough /// homeobox A9 /// microRNA 196b </td> <td> HOXA10-HOXA9 /// HOXA9 /// MIR196B </td> <td> 3205 /// 442920 /// 100534589 </td> <td> NM_152739 /// NR_029911 /// NR_037940 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042118 // endothelial cell activation // inferred from mutant phenotype /// 0045638 // negative regulation of myeloid cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0060216 // definitive hemopoiesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 93.10 </td> <td> 145.35 </td> <td> 6.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208711_s_at </td> <td> 208711_s_at </td> <td> BC000076 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000076.1 /DEF=Homo sapiens, cyclin D1 (PRAD1: parathyroid adenomatosis 1), clone MGC:2316, mRNA, complete cds.  /FEA=mRNA /PROD=cyclin D1 (PRAD1: parathyroid adenomatosis 1) /DB_XREF=gi:12652656 /UG=Hs.82932 cyclin D1 (PRAD1: parathyroid adenomatosis 1) /FL=gb:BC000076.1 gb:M73554.1 </td> <td> BC000076 </td> <td> cyclin D1 </td> <td> CCND1 </td> <td> 595 </td> <td> NM_053056 /// XM_006718653 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0000320 // re-entry into mitotic cell cycle // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007595 // lactation // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from electronic annotation /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010633 // negative regulation of epithelial cell migration // inferred from electronic annotation /// 0010633 // negative regulation of epithelial cell migration // inferred from sequence or structural similarity /// 0010971 // positive regulation of G2/M transition of mitotic cell cycle // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from electronic annotation /// 0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031571 // mitotic G1 DNA damage checkpoint // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0033327 // Leydig cell differentiation // inferred from electronic annotation /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0033601 // positive regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from expression pattern /// 0043627 // response to estrogen // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045737 // positive regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051497 // negative regulation of stress fiber assembly // inferred from electronic annotation /// 0051497 // negative regulation of stress fiber assembly // inferred from sequence or structural similarity /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway // inferred from electronic annotation /// 0060675 // ureteric bud morphogenesis // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation /// 0070141 // response to UV-A // inferred from direct assay /// 0071157 // negative regulation of cell cycle arrest // inferred from direct assay /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0090191 // negative regulation of branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0090191 // negative regulation of branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 1900025 // negative regulation of substrate adhesion-dependent cell spreading // inferred from electronic annotation /// 1900025 // negative regulation of substrate adhesion-dependent cell spreading // inferred from sequence or structural similarity /// 1900028 // negative regulation of ruffle assembly // inferred from electronic annotation /// 1900028 // negative regulation of ruffle assembly // inferred from sequence or structural similarity /// 2000045 // regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 2000146 // negative regulation of cell motility // inferred from electronic annotation /// 2000146 // negative regulation of cell motility // inferred from sequence or structural similarity /// 2000738 // positive regulation of stem cell differentiation // inferred from electronic annotation </td> <td> 0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005923 // tight junction // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016538 // cyclin-dependent protein serine/threonine kinase regulator activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from direct assay </td> <td> 102.32 </td> <td> 142.14 </td> <td> 6.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201098_at </td> <td> 201098_at </td> <td> NM_004766 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004766.1 /DEF=Homo sapiens coatomer protein complex, subunit beta 2 (beta prime) (COPB2), mRNA.  /FEA=mRNA /GEN=COPB2 /PROD=coatomer protein complex, subunit beta 2 (betaprime) /DB_XREF=gi:4758031 /UG=Hs.75724 coatomer protein complex, subunit beta 2 (beta prime) /FL=gb:BC000326.1 gb:NM_004766.1 </td> <td> NM_004766 </td> <td> coatomer protein complex, subunit beta 2 (beta prime) </td> <td> COPB2 </td> <td> 9276 </td> <td> NM_004766 /// NR_023350 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from direct assay /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 111.28 </td> <td> 348.89 </td> <td> 6.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201346_at </td> <td> 201346_at </td> <td> NM_024551 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024551.1 /DEF=Homo sapiens hypothetical protein FLJ21432 (FLJ21432), mRNA. /FEA=mRNA /GEN=FLJ21432 /PROD=hypothetical protein FLJ21432 /DB_XREF=gi:13375714 /UG=Hs.11641 hypothetical protein FLJ21432 /FL=gb:NM_024551.1 gb:BC004906.1 </td> <td> NM_024551 </td> <td> adiponectin receptor 2 </td> <td> ADIPOR2 </td> <td> 79602 </td> <td> NM_024551 /// XM_005253789 /// XM_006719018 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from sequence or structural similarity /// 0019395 // fatty acid oxidation // inferred from sequence or structural similarity /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0033211 // adiponectin-activated signaling pathway // not recorded /// 0046326 // positive regulation of glucose import // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0042562 // hormone binding // not recorded /// 0042562 // hormone binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 72.10 </td> <td> 177.57 </td> <td> 6.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 205890_s_at </td> <td> 205890_s_at </td> <td> NM_006398 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006398.1 /DEF=Homo sapiens diubiquitin (UBD), mRNA. /FEA=mRNA /GEN=UBD /PROD=diubiquitin /DB_XREF=gi:5454143 /UG=Hs.44532 diubiquitin /FL=gb:NM_006398.1 </td> <td> NM_006398 </td> <td> gamma-aminobutyric acid (GABA) B receptor, 1 /// ubiquitin D </td> <td> GABBR1 /// UBD </td> <td> 2550 /// 10537 </td> <td> NM_001470 /// NM_006398 /// NM_021903 /// NM_021904 /// NM_021905 /// XM_005248982 /// XM_005272785 /// XM_005274841 /// XM_005274931 /// XM_005275088 /// XM_005275227 /// XM_005275363 /// XM_006715047 /// XM_006725030 /// XM_006725477 /// XM_006725691 /// XM_006725807 /// XM_006725901 /// XM_006725988 /// XR_241884 /// XR_246960 /// XR_247352 /// XR_247386 /// XR_247400 /// XR_430672 /// XR_430972 </td> <td> 0006508 // proteolysis // non-traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007194 // negative regulation of adenylate cyclase activity // traceable author statement /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0032446 // protein modification by small protein conjugation // non-traceable author statement /// 0034341 // response to interferon-gamma // inferred from expression pattern /// 0034612 // response to tumor necrosis factor // inferred from expression pattern /// 0043011 // myeloid dendritic cell differentiation // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0070842 // aggresome assembly // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0038037 // G-protein coupled receptor dimeric complex // inferred from electronic annotation /// 0038039 // G-protein coupled receptor heterodimeric complex // inferred from physical interaction /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0070628 // proteasome binding // inferred from direct assay </td> <td> -67.25 </td> <td> 39.80 </td> <td> -6.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209272_at </td> <td> 209272_at </td> <td> AF045451 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF045451.1 /DEF=Homo sapiens transcriptional regulatory protein p54 mRNA, complete cds.  /FEA=mRNA /PROD=transcriptional regulatory protein p54 /DB_XREF=gi:3282822 /UG=Hs.107474 NGFI-A binding protein 1 (ERG1 binding protein 1) /FL=gb:AF045451.1 </td> <td> AF045451 </td> <td> NGFI-A binding protein 1 (EGR1 binding protein 1) </td> <td> NAB1 </td> <td> 4664 </td> <td> NM_005966 /// XM_005246579 /// XM_005246580 /// XM_005246581 /// XM_005246582 /// XM_005246583 /// XM_005246584 /// XM_005246585 /// XM_005246586 /// XM_005246587 /// XM_006712540 </td> <td> 0001958 // endochondral ossification // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0014037 // Schwann cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0045682 // regulation of epidermis development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0005634 // nucleus // non-traceable author statement </td> <td> 0008134 // transcription factor binding // inferred from electronic annotation </td> <td> -61.63 </td> <td> 97.79 </td> <td> -6.40 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 205585_at </td> <td> 205585_at </td> <td> NM_001987 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001987.1 /DEF=Homo sapiens ets variant gene 6 (TEL oncogene) (ETV6), mRNA. /FEA=mRNA /GEN=ETV6 /PROD=ets variant gene 6 (TEL oncogene) /DB_XREF=gi:4503610 /UG=Hs.169081 ets variant gene 6 (TEL oncogene) /FL=gb:NM_001987.1 gb:U11732.1 </td> <td> NM_001987 </td> <td> ets variant 6 </td> <td> ETV6 </td> <td> 2120 </td> <td> NM_001987 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0006959 // humoral immune response // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0030154 // cell differentiation // not recorded /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0001227 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred by curator /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -54.70 </td> <td> 59.30 </td> <td> -6.40 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 206157_at </td> <td> 206157_at </td> <td> NM_002852 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002852.1 /DEF=Homo sapiens pentaxin-related gene, rapidly induced by IL-1 beta (PTX3), mRNA.  /FEA=mRNA /GEN=PTX3 /PROD=pentaxin-related gene, rapidly induced by IL-1beta /DB_XREF=gi:4506332 /UG=Hs.2050 pentaxin-related gene, rapidly induced by IL-1 beta /FL=gb:M31166.1 gb:NM_002852.1 </td> <td> NM_002852 </td> <td> pentraxin 3, long </td> <td> PTX3 </td> <td> 5806 </td> <td> NM_002852 </td> <td> 0001878 // response to yeast // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0008228 // opsonization // inferred from electronic annotation /// 0045087 // innate immune response // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0046597 // negative regulation of viral entry into host cell // inferred from direct assay /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 1903016 // negative regulation of exo-alpha-sialidase activity // inferred from direct assay /// 1903019 // negative regulation of glycoprotein metabolic process // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay </td> <td> 0001849 // complement component C1q binding // inferred from direct assay /// 0001872 // (1-&gt;3)-beta-D-glucan binding // inferred from electronic annotation /// 0046790 // virion binding // inferred from direct assay </td> <td> -942.12 </td> <td> 1783.16 </td> <td> -6.39 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201788_at </td> <td> 201788_at </td> <td> NM_007372 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007372.1 /DEF=Homo sapiens RNA helicase-related protein (RNAHP), mRNA. /FEA=mRNA /GEN=RNAHP /PROD=RNA helicase-related protein /DB_XREF=gi:11321631 /UG=Hs.8765 RNA helicase-related protein /FL=gb:NM_007372.1 gb:AF083255.1 </td> <td> NM_007372 </td> <td> DEAD (Asp-Glu-Ala-Asp) box helicase 42 </td> <td> DDX42 </td> <td> 11325 </td> <td> NM_007372 /// NM_203499 /// XM_006721657 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0008104 // protein localization // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 114.60 </td> <td> 189.20 </td> <td> 6.39 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212502_at </td> <td> 212502_at </td> <td> AV713053 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV713053 /FEA=EST /DB_XREF=gi:10732372 /DB_XREF=est:AV713053 /CLONE=DCAADD03 /UG=Hs.99821 Homo sapiens mRNA; cDNA DKFZp564C046 (from clone DKFZp564C046) </td> <td> AV713053 </td> <td> 2-aminoethanethiol (cysteamine) dioxygenase </td> <td> ADO </td> <td> 84890 </td> <td> NM_032804 </td> <td> 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047800 // cysteamine dioxygenase activity // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> 62.55 </td> <td> 98.40 </td> <td> 6.39 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213455_at </td> <td> 213455_at </td> <td> W87466 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W87466 /FEA=EST /DB_XREF=gi:1401521 /DB_XREF=est:zh67c05.s1 /CLONE=IMAGE:417128 /UG=Hs.246885 hypothetical protein FLJ20783 </td> <td> W87466 </td> <td> family with sequence similarity 114, member A1 </td> <td> FAM114A1 </td> <td> 92689 </td> <td> NM_138389 /// NR_033290 /// XM_005262672 /// XM_005262673 /// XM_006714033 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td>  </td> <td> 145.77 </td> <td> 410.04 </td> <td> 6.38 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 210757_x_at </td> <td> 210757_x_at </td> <td> AF188298 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF188298.1 /DEF=Homo sapiens disabled 2 p93 (DAB2) mRNA, alternatively spliced, complete cds.  /FEA=mRNA /GEN=DAB2 /PROD=disabled 2 p93 /DB_XREF=gi:6176335 /UG=Hs.81988 disabled (Drosophila) homolog 2 (mitogen-responsive phosphoprotein) /FL=gb:AF188298.1 </td> <td> AF188298 </td> <td> Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) /// uncharacterized LOC101926921 </td> <td> DAB2 /// LOC101926921 </td> <td> 1601 /// 101926921 </td> <td> NM_001244871 /// NM_001343 /// XR_241759 /// XR_249766 /// XR_251775 </td> <td> 0000904 // cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001921 // positive regulation of receptor recycling // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0006907 // pinocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007588 // excretion // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030099 // myeloid cell differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0032091 // negative regulation of protein binding // inferred from mutant phenotype /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0032968 // positive regulation of transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from direct assay /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 0061024 // membrane organization // traceable author statement /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from electronic annotation /// 2000096 // positive regulation of Wnt signaling pathway, planar cell polarity pathway // inferred from mutant phenotype /// 2000370 // positive regulation of clathrin-mediated endocytosis // inferred from mutant phenotype /// 2000643 // positive regulation of early endosome to late endosome transport // inferred from mutant phenotype /// 2001046 // positive regulation of integrin-mediated signaling pathway // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030132 // clathrin coat of coated pit // inferred from electronic annotation /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070022 // transforming growth factor beta receptor homodimeric complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0030276 // clathrin binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0035612 // AP-2 adaptor complex binding // inferred from electronic annotation /// 0035615 // clathrin adaptor activity // inferred from mutant phenotype /// 0038024 // cargo receptor activity // inferred from mutant phenotype /// 0046332 // SMAD binding // inferred from direct assay </td> <td> 201.55 </td> <td> 684.85 </td> <td> 6.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 221986_s_at </td> <td> 221986_s_at </td> <td> AW006750 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW006750 /FEA=EST /DB_XREF=gi:5855528 /DB_XREF=est:wr28h09.x1 /CLONE=IMAGE:2489057 /UG=Hs.246875 hypothetical protein FLJ20059 </td> <td> AW006750 </td> <td> kelch-like family member 24 </td> <td> KLHL24 </td> <td> 54800 </td> <td> NM_017644 /// XM_005247552 /// XM_005247553 /// XM_005247554 /// XM_005247555 /// XM_005247556 /// XM_006713674 /// XR_241499 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -73.95 </td> <td> 41.67 </td> <td> -6.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 216841_s_at </td> <td> 216841_s_at </td> <td> X15132 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X15132.1 /DEF=Human mRNA for manganese containing superoxide dismutase (EC 1.15.1.1).  /FEA=mRNA /DB_XREF=gi:34794 /UG=Hs.318885 superoxide dismutase 2, mitochondrial </td> <td> X15132 </td> <td> uncharacterized LOC100129518 /// superoxide dismutase 2, mitochondrial </td> <td> LOC100129518 /// SOD2 </td> <td> 6648 /// 100129518 </td> <td> NM_000636 /// NM_001024465 /// NM_001024466 /// NR_037166 </td> <td> 0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0000303 // response to superoxide // inferred from mutant phenotype /// 0001306 // age-dependent response to oxidative stress // inferred from electronic annotation /// 0001315 // age-dependent response to reactive oxygen species // inferred from mutant phenotype /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0003032 // detection of oxygen // inferred from electronic annotation /// 0003069 // vasodilation by acetylcholine involved in regulation of systemic arterial blood pressure // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006801 // superoxide metabolic process // inferred from direct assay /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0008631 // intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from electronic annotation /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010042 // response to manganese ion // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010269 // response to selenium ion // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0019430 // removal of superoxide radicals // inferred from mutant phenotype /// 0022904 // respiratory electron transport chain // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032364 // oxygen homeostasis // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0034021 // response to silicon dioxide // inferred from electronic annotation /// 0042311 // vasodilation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0042743 // hydrogen peroxide metabolic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0048773 // erythrophore differentiation // inferred from electronic annotation /// 0050665 // hydrogen peroxide biosynthetic process // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from physical interaction /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071361 // cellular response to ethanol // inferred from electronic annotation /// 1902176 // negative regulation of intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0042645 // mitochondrial nucleoid // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0004784 // superoxide dismutase activity // inferred from direct assay /// 0004784 // superoxide dismutase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019825 // oxygen binding // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0030145 // manganese ion binding // traceable author statement /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -491.43 </td> <td> 270.44 </td> <td> -6.36 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 217783_s_at </td> <td> 217783_s_at </td> <td> NM_016061 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016061.1 /DEF=Homo sapiens CGI-127 protein (LOC51646), mRNA. /FEA=mRNA /GEN=LOC51646 /PROD=CGI-127 protein /DB_XREF=gi:7706340 /UG=Hs.184542 CGI-127 protein /FL=gb:BC000836.1 gb:AF151885.1 gb:NM_016061.1 </td> <td> NM_016061 </td> <td> yippee-like 5 (Drosophila) </td> <td> YPEL5 </td> <td> 51646 </td> <td> NM_001127399 /// NM_001127400 /// NM_001127401 /// NM_016061 </td> <td>  </td> <td>  </td> <td>  </td> <td> -139.65 </td> <td> 375.10 </td> <td> -6.36 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202557_at </td> <td> 202557_at </td> <td> AI718418 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI718418 /FEA=EST /DB_XREF=gi:5035674 /DB_XREF=est:as43b01.x1 /CLONE=IMAGE:2319913 /UG=Hs.288799 stress 70 protein chaperone, microsome-associated, 60kD /FL=gb:U04735.1 gb:NM_006948.1 </td> <td> AI718418 </td> <td> heat shock protein 70kDa family, member 13 </td> <td> HSPA13 </td> <td> 6782 </td> <td> NM_006948 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> -176.13 </td> <td> 238.06 </td> <td> -6.36 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212445_s_at </td> <td> 212445_s_at </td> <td> AI357376 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI357376 /FEA=EST /DB_XREF=gi:4108997 /DB_XREF=est:qy13a06.x1 /CLONE=IMAGE:2011858 /UG=Hs.12017 homolog of yeast ubiquitin-protein ligase Rsp5; potential epithelial sodium channel regulator </td> <td> AI357376 </td> <td> neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase </td> <td> NEDD4L </td> <td> 23327 </td> <td> NM_001144964 /// NM_001144965 /// NM_001144966 /// NM_001144967 /// NM_001144968 /// NM_001144969 /// NM_001144970 /// NM_001144971 /// NM_001243960 /// NM_015277 /// XM_005266658 /// XM_005266660 /// XM_005266663 /// XM_006722421 /// XM_006722422 /// XM_006722423 /// XM_006722424 /// XM_006722425 /// XM_006722426 /// XM_006722427 /// XM_006722428 /// XM_006722429 /// XM_006722430 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0003085 // negative regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0003254 // regulation of membrane depolarization // inferred from direct assay /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006513 // protein monoubiquitination // inferred from electronic annotation /// 0006814 // sodium ion transport // non-traceable author statement /// 0006883 // cellular sodium ion homeostasis // non-traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007588 // excretion // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009651 // response to salt stress // inferred from electronic annotation /// 0010038 // response to metal ion // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010765 // positive regulation of sodium ion transport // inferred from electronic annotation /// 0010766 // negative regulation of sodium ion transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // non-traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0030104 // water homeostasis // non-traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from direct assay /// 0042176 // regulation of protein catabolic process // non-traceable author statement /// 0042391 // regulation of membrane potential // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043162 // ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060306 // regulation of membrane repolarization // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0086005 // ventricular cardiac muscle cell action potential // inferred from sequence or structural similarity /// 1901016 // regulation of potassium ion transmembrane transporter activity // inferred from direct assay /// 1901017 // negative regulation of potassium ion transmembrane transporter activity // inferred from direct assay /// 1901380 // negative regulation of potassium ion transmembrane transport // inferred from direct assay /// 1902306 // negative regulation of sodium ion transmembrane transport // inferred from direct assay /// 2000009 // negative regulation of protein localization to cell surface // inferred from direct assay /// 2000650 // negative regulation of sodium ion transmembrane transporter activity // inferred from direct assay /// 2000810 // regulation of tight junction assembly // inferred from electronic annotation /// 2001259 // positive regulation of cation channel activity // inferred from electronic annotation /// 2001288 // positive regulation of caveolin-mediated endocytosis // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred by curator /// 0005634 // nucleus // not recorded /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // not recorded /// 0004842 // ubiquitin-protein transferase activity // non-traceable author statement /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // inferred from direct assay /// 0019870 // potassium channel inhibitor activity // inferred from direct assay /// 0019871 // sodium channel inhibitor activity // inferred from direct assay /// 0044325 // ion channel binding // inferred from physical interaction </td> <td> -58.10 </td> <td> 84.05 </td> <td> -6.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202628_s_at </td> <td> 202628_s_at </td> <td> NM_000602 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000602.1 /DEF=Homo sapiens serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 (SERPINE1), mRNA.  /FEA=mRNA /GEN=SERPINE1 /PROD=serine (or cysteine) proteinase inhibitor, cladeE (nexin, plasminogen activator inhibitor type 1), member1 /DB_XREF=gi:10835158 /UG=Hs.82085 serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 /FL=gb:NM_000602.1 gb:M16006.1 </td> <td> NM_000602 </td> <td> serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 </td> <td> SERPINE1 </td> <td> 5054 </td> <td> NM_000602 /// NM_001165413 </td> <td> 0001300 // chronological cell aging // inferred from expression pattern /// 0001525 // angiogenesis // inferred from expression pattern /// 0002576 // platelet degranulation // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010469 // regulation of receptor activity // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from mutant phenotype /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from mutant phenotype /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030198 // extracellular matrix organization // traceable author statement /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from mutant phenotype /// 0033629 // negative regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0035491 // positive regulation of leukotriene production involved in inflammatory response // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042730 // fibrinolysis // traceable author statement /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0050729 // positive regulation of inflammatory response // inferred from genetic interaction /// 0050829 // defense response to Gram-negative bacterium // inferred from genetic interaction /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay /// 0061044 // negative regulation of vascular wound healing // inferred from genetic interaction /// 0061045 // negative regulation of wound healing // inferred by curator /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 0090026 // positive regulation of monocyte chemotaxis // inferred from mutant phenotype /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 2000098 // negative regulation of smooth muscle cell-matrix adhesion // inferred from direct assay /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> -1212.97 </td> <td> 3988.36 </td> <td> -6.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209197_at </td> <td> 209197_at </td> <td> AA626780 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA626780 /FEA=EST /DB_XREF=gi:2539167 /DB_XREF=est:ad09f03.s1 /CLONE=IMAGE:877757 /UG=Hs.74554 KIAA0080 protein /FL=gb:BC004291.1 </td> <td> AA626780 </td> <td> synaptotagmin XI </td> <td> SYT11 </td> <td> 23208 </td> <td> NM_152280 /// XM_005245014 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 67.62 </td> <td> 117.01 </td> <td> 6.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201671_x_at </td> <td> 201671_x_at </td> <td> BC003556 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003556.1 /DEF=Homo sapiens, ubiquitin specific protease 14 (tRNA-guanine transglycosylase), clone MGC:1453, mRNA, complete cds.  /FEA=mRNA /PROD=ubiquitin specific protease 14 (tRNA-guaninetransglycosylase) /DB_XREF=gi:13097695 /UG=Hs.75981 ubiquitin specific protease 14 (tRNA-guanine transglycosylase) /FL=gb:BC003556.1 gb:NM_005151.1 gb:U30888.1 </td> <td> BC003556 </td> <td> ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) </td> <td> USP14 </td> <td> 9097 </td> <td> NM_001037334 /// NM_005151 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from mutant phenotype /// 0016579 // protein deubiquitination // inferred from direct assay /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0061136 // regulation of proteasomal protein catabolic process // inferred from mutant phenotype </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004866 // endopeptidase inhibitor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008193 // tRNA guanylyltransferase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation /// 0070628 // proteasome binding // inferred from direct assay </td> <td> 127.45 </td> <td> 245.47 </td> <td> 6.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 206562_s_at </td> <td> 206562_s_at </td> <td> NM_001892 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001892.1 /DEF=Homo sapiens casein kinase 1, alpha 1 (CSNK1A1), mRNA. /FEA=mRNA /GEN=CSNK1A1 /PROD=casein kinase 1, alpha 1 /DB_XREF=gi:4503088 /UG=Hs.283738 casein kinase 1, alpha 1 /FL=gb:NM_001892.1 gb:L37042.1 </td> <td> NM_001892 </td> <td> casein kinase 1, alpha 1 </td> <td> CSNK1A1 </td> <td> 1452 </td> <td> NM_001025105 /// NM_001271741 /// NM_001271742 /// NM_001892 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -184.95 </td> <td> 467.20 </td> <td> -6.34 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212199_at </td> <td> 212199_at </td> <td> AL566962 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL566962 /FEA=EST /DB_XREF=gi:12919867 /DB_XREF=est:AL566962 /CLONE=CS0DF026YH08 (3 prime) /UG=Hs.284281 Human putative ribosomal protein S1 mRNA </td> <td> AL566962 </td> <td> Morf4 family associated protein 1-like 1 </td> <td> MRFAP1L1 </td> <td> 114932 </td> <td> NM_152301 /// NM_203462 /// XM_005247932 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 95.65 </td> <td> 141.10 </td> <td> 6.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 203820_s_at </td> <td> 203820_s_at </td> <td> NM_006547 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006547.1 /DEF=Homo sapiens IGF-II mRNA-binding protein 3 (KOC1), mRNA. /FEA=mRNA /GEN=KOC1 /PROD=IGF-II mRNA-binding protein 3 /DB_XREF=gi:5729900 /UG=Hs.79440 IGF-II mRNA-binding protein 3 /FL=gb:U97188.1 gb:U76705.1 gb:AF117108.1 gb:NM_006547.1 </td> <td> NM_006547 </td> <td> insulin-like growth factor 2 mRNA binding protein 3 </td> <td> IGF2BP3 </td> <td> 10643 </td> <td> NM_006547 /// XM_006715638 /// XM_006715639 </td> <td> 0006412 // translation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0042035 // regulation of cytokine biosynthetic process // inferred by curator /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0045182 // translation regulator activity // inferred from sequence or structural similarity /// 0048027 // mRNA 5'-UTR binding // inferred from direct assay </td> <td> 255.55 </td> <td> 595.85 </td> <td> 6.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200715_x_at </td> <td> 200715_x_at </td> <td> BC000514 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000514.1 /DEF=Homo sapiens, ribosomal protein L13a, clone MGC:8547, mRNA, complete cds.  /FEA=mRNA /PROD=ribosomal protein L13a /DB_XREF=gi:12653484 /UG=Hs.119122 ribosomal protein L13a /FL=gb:BC000514.1 gb:NM_012423.1 </td> <td> BC000514 </td> <td> ribosomal protein L13a /// small nucleolar RNA, C/D box 32A /// small nucleolar RNA, C/D box 33 /// small nucleolar RNA, C/D box 34 /// small nucleolar RNA, C/D box 35A </td> <td> RPL13A /// SNORD32A /// SNORD33 /// SNORD34 /// SNORD35A </td> <td> 23521 /// 26816 /// 26817 /// 26818 /// 26819 </td> <td> NM_001270491 /// NM_012423 /// NR_000018 /// NR_000019 /// NR_000020 /// NR_000021 /// NR_073024 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071346 // cellular response to interferon-gamma // inferred from direct assay /// 1901194 // negative regulation of formation of translation preinitiation complex // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015934 // large ribosomal subunit // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -987.25 </td> <td> 2490.22 </td> <td> -6.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 203367_at </td> <td> 203367_at </td> <td> NM_007026 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007026.1 /DEF=Homo sapiens MKP-1 like protein tyrosine phosphatase (MKP-L), mRNA. /FEA=mRNA /GEN=MKP-L /PROD=MKP-1 like protein tyrosine phosphatase /DB_XREF=gi:5902001 /UG=Hs.91448 MKP-1 like protein tyrosine phosphatase /FL=gb:BC000370.1 gb:BC001894.1 gb:BC004448.1 gb:AF038844.1 gb:NM_007026.1 gb:AF120032.1 </td> <td> NM_007026 </td> <td> dual specificity phosphatase 14 </td> <td> DUSP14 </td> <td> 11072 </td> <td> NM_007026 /// XM_005256977 /// XM_006725300 </td> <td> 0000188 // inactivation of MAPK activity // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // not recorded </td> <td>  </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 93.62 </td> <td> 220.61 </td> <td> 6.32 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 217845_x_at </td> <td> 217845_x_at </td> <td> NM_014056 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014056.1 /DEF=Homo sapiens DKFZP564K247 protein (DKFZP564K247), mRNA. /FEA=mRNA /GEN=DKFZP564K247 /PROD=DKFZP564K247 protein /DB_XREF=gi:7661619 /UG=Hs.7917 DKFZP564K247 protein /FL=gb:BC000601.1 gb:AF077034.1 gb:AF145385.1 gb:AL110233.1 gb:NM_014056.1 </td> <td> NM_014056 </td> <td> HIG1 hypoxia inducible domain family, member 1A </td> <td> HIGD1A </td> <td> 25994 </td> <td> NM_001099668 /// NM_001099669 /// NM_014056 </td> <td> 0006950 // response to stress // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td>  </td> <td> 128.38 </td> <td> 586.69 </td> <td> 6.31 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 211828_s_at </td> <td> 211828_s_at </td> <td> AF172268 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF172268.1 /DEF=Homo sapiens Traf2 and NCK interacting kinase, splice variant 5 (TNIK) mRNA, complete cds.  /FEA=CDS /GEN=TNIK /PROD=Traf2 and NCK interacting kinase, splice variant5 /DB_XREF=gi:6110356 /UG=Hs.170204 KIAA0551 protein /FL=gb:AF172268.1 </td> <td> AF172268 </td> <td> TRAF2 and NCK interacting kinase </td> <td> TNIK </td> <td> 23043 </td> <td> NM_001161560 /// NM_001161561 /// NM_001161562 /// NM_001161563 /// NM_001161564 /// NM_001161565 /// NM_001161566 /// NM_015028 /// NR_027767 /// XM_006713555 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007256 // activation of JNKK activity // inferred from direct assay /// 0007256 // activation of JNKK activity // inferred from mutant phenotype /// 0007399 // nervous system development // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048814 // regulation of dendrite morphogenesis // inferred from direct assay /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 56.33 </td> <td> 100.49 </td> <td> 6.31 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201605_x_at </td> <td> 201605_x_at </td> <td> NM_004368 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004368.1 /DEF=Homo sapiens calponin 2 (CNN2), mRNA. /FEA=mRNA /GEN=CNN2 /PROD=calponin 2 /DB_XREF=gi:4758017 /UG=Hs.169718 calponin 2 /FL=gb:D83735.1 gb:NM_004368.1 </td> <td> NM_004368 </td> <td> calponin 2 </td> <td> CNN2 </td> <td> 1265 </td> <td> NM_004368 /// NM_201277 </td> <td> 0007010 // cytoskeleton organization // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0031032 // actomyosin structure organization // inferred from electronic annotation /// 0032970 // regulation of actin filament-based process // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0050765 // negative regulation of phagocytosis // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from direct assay </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005911 // cell-cell junction // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation </td> <td> 87.12 </td> <td> 272.09 </td> <td> 6.31 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 219390_at </td> <td> 219390_at </td> <td> NM_017946 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017946.1 /DEF=Homo sapiens hypothetical protein FLJ20731 (FLJ20731), mRNA. /FEA=mRNA /GEN=FLJ20731 /PROD=hypothetical protein FLJ20731 /DB_XREF=gi:8923658 /UG=Hs.264636 hypothetical protein FLJ20731 /FL=gb:BC005206.1 gb:NM_017946.1 </td> <td> NM_017946 </td> <td> FK506 binding protein 14, 22 kDa </td> <td> FKBP14 </td> <td> 55033 </td> <td> NM_017946 /// NR_046478 /// NR_046479 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0006457 // protein folding // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0018208 // peptidyl-proline modification //  /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0061077 // chaperone-mediated protein folding // not recorded </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // not recorded /// 0016020 // membrane // </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 55.22 </td> <td> 73.96 </td> <td> 6.30 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201378_s_at </td> <td> 201378_s_at </td> <td> NM_014847 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014847.1 /DEF=Homo sapiens KIAA0144 gene product (KIAA0144), mRNA. /FEA=mRNA /GEN=KIAA0144 /PROD=KIAA0144 gene product /DB_XREF=gi:7661941 /UG=Hs.8127 KIAA0144 gene product /FL=gb:D63478.1 gb:NM_014847.1 </td> <td> NM_014847 </td> <td> ubiquitin associated protein 2-like </td> <td> UBAP2L </td> <td> 9898 </td> <td> NM_001127320 /// NM_001287815 /// NM_001287816 /// NM_014847 /// XM_005245658 /// XM_005245667 /// XM_005245668 /// XM_005245669 /// XM_005245670 /// XM_005245672 /// XM_005245673 /// XM_005245674 /// XM_006711679 /// XM_006711680 /// XM_006711681 /// XM_006711682 /// XM_006711683 /// XM_006711684 /// XM_006711685 /// XM_006711686 /// XM_006711687 /// XM_006711688 /// XM_006711689 </td> <td> 0007339 // binding of sperm to zona pellucida // inferred from mutant phenotype </td> <td> 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 144.80 </td> <td> 250.25 </td> <td> 6.30 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 219283_at </td> <td> 219283_at </td> <td> NM_014158 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014158.1 /DEF=Homo sapiens HSPC067 protein (HSPC067), mRNA. /FEA=mRNA /GEN=HSPC067 /PROD=HSPC067 protein /DB_XREF=gi:7661771 /UG=Hs.279938 HSPC067 protein /FL=gb:AF161552.1 gb:NM_014158.1 </td> <td> NM_014158 </td> <td> C1GALT1-specific chaperone 1 </td> <td> C1GALT1C1 </td> <td> 29071 </td> <td> NM_001011551 /// NM_152692 </td> <td> 0006493 // protein O-linked glycosylation // inferred from mutant phenotype /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 90.40 </td> <td> 147.43 </td> <td> 6.30 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201881_s_at </td> <td> 201881_s_at </td> <td> NM_005744 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005744.2 /DEF=Homo sapiens ariadne (Drosophila) homolog, ubiquitin-conjugating enzyme E2-binding protein, 1 (ARIH1), mRNA.  /FEA=mRNA /GEN=ARIH1 /PROD=ariadne homolog /DB_XREF=gi:9966762 /UG=Hs.181461 ariadne (Drosophila) homolog, ubiquitin-conjugating enzyme E2-binding protein, 1 /FL=gb:AF072832.1 gb:NM_005744.2 </td> <td> NM_005744 </td> <td> ariadne RBR E3 ubiquitin protein ligase 1 </td> <td> ARIH1 </td> <td> 25820 </td> <td> NM_005744 /// XM_006720460 </td> <td> 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement </td> <td> 0000151 // ubiquitin ligase complex // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0019787 // small conjugating protein ligase activity // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -66.00 </td> <td> 124.33 </td> <td> -6.30 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208025_s_at </td> <td> 208025_s_at </td> <td> NM_003483 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003483.2 /DEF=Homo sapiens high-mobility group (nonhistone chromosomal) protein isoform I-C (HMGIC), mRNA.  /FEA=mRNA /GEN=HMGIC /PROD=high-mobility group (nonhistone chromosomal)protein isoform I-C /DB_XREF=gi:6631086 /FL=gb:NM_003483.2 </td> <td> NM_003483 </td> <td> high mobility group AT-hook 2 </td> <td> HMGA2 </td> <td> 8091 </td> <td> NM_001015886 /// NM_003483 /// NM_003484 /// XM_005269164 /// XM_006719620 /// XR_245958 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000737 // DNA catabolic process, endonucleolytic // inferred from direct assay /// 0001837 // epithelial to mesenchymal transition // inferred from mutant phenotype /// 0002062 // chondrocyte differentiation // inferred from direct assay /// 0003131 // mesodermal-endodermal cell signaling // inferred from mutant phenotype /// 0006284 // base-excision repair // inferred from direct assay /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007095 // mitotic G2 DNA damage checkpoint // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0010564 // regulation of cell cycle process // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0021846 // cell proliferation in forebrain // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030261 // chromosome condensation // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0031052 // chromosome breakage // inferred from direct assay /// 0031507 // heterochromatin assembly // inferred from direct assay /// 0033144 // negative regulation of intracellular steroid hormone receptor signaling pathway // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035978 // histone H2A-S139 phosphorylation // inferred from direct assay /// 0035986 // senescence-associated heterochromatin focus assembly // inferred from direct assay /// 0035987 // endodermal cell differentiation // inferred from mutant phenotype /// 0035988 // chondrocyte proliferation // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042769 // DNA damage response, detection of DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043922 // negative regulation by host of viral transcription // inferred from direct assay /// 0045444 // fat cell differentiation // inferred from mutant phenotype /// 0045869 // negative regulation of single stranded viral RNA replication via double stranded DNA intermediate // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046426 // negative regulation of JAK-STAT cascade // inferred from electronic annotation /// 0048333 // mesodermal cell differentiation // inferred from mutant phenotype /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048762 // mesenchymal cell differentiation // inferred from mutant phenotype /// 0048863 // stem cell differentiation // inferred from expression pattern /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0060123 // regulation of growth hormone secretion // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0060613 // fat pad development // inferred from electronic annotation /// 0071158 // positive regulation of cell cycle arrest // inferred from direct assay /// 0090276 // regulation of peptide hormone secretion // inferred from electronic annotation /// 0090402 // oncogene-induced cell senescence // inferred from direct assay /// 2000036 // regulation of stem cell maintenance // inferred from mutant phenotype /// 2000036 // regulation of stem cell maintenance // traceable author statement /// 2000648 // positive regulation of stem cell proliferation // inferred from direct assay /// 2000648 // positive regulation of stem cell proliferation // inferred from mutant phenotype /// 2000679 // positive regulation of transcription regulatory region DNA binding // inferred from direct assay /// 2000685 // positive regulation of cellular response to X-ray // inferred from direct assay /// 2000774 // positive regulation of cellular senescence // inferred from mutant phenotype /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from direct assay /// 2001033 // negative regulation of double-strand break repair via nonhomologous end joining // inferred from direct assay /// 2001038 // regulation of cellular response to drug // inferred from direct assay </td> <td> 0000228 // nuclear chromosome // inferred from sequence or structural similarity /// 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0032993 // protein-DNA complex // inferred from direct assay /// 0035985 // senescence-associated heterochromatin focus // inferred from direct assay /// 0071141 // SMAD protein complex // inferred from direct assay </td> <td> 0000975 // regulatory region DNA binding // inferred from direct assay /// 0000988 // protein binding transcription factor activity // inferred from direct assay /// 0001047 // core promoter binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // non-traceable author statement /// 0003680 // AT DNA binding // inferred from direct assay /// 0003680 // AT DNA binding // inferred from mutant phenotype /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity // inferred from direct assay /// 0004677 // DNA-dependent protein kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008301 // DNA binding, bending // inferred from direct assay /// 0008301 // DNA binding, bending // inferred from mutant phenotype /// 0019899 // enzyme binding // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0035497 // cAMP response element binding // inferred from direct assay /// 0035500 // MH2 domain binding // inferred from direct assay /// 0035501 // MH1 domain binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from physical interaction /// 0051575 // 5'-deoxyribose-5-phosphate lyase activity // inferred from direct assay /// 0070742 // C2H2 zinc finger domain binding // inferred from mutant phenotype </td> <td> 252.13 </td> <td> 503.84 </td> <td> 6.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 204200_s_at </td> <td> 204200_s_at </td> <td> NM_002608 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002608.1 /DEF=Homo sapiens platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog) (PDGFB), mRNA.  /FEA=mRNA /GEN=PDGFB /PROD=platelet-derived growth factor beta polypeptide(simian sarcoma viral (v-sis) oncogene homolog) /DB_XREF=gi:4505680 /UG=Hs.1976 platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog) /FL=gb:M12783.1 gb:NM_002608.1 </td> <td> NM_002608 </td> <td> platelet-derived growth factor beta polypeptide </td> <td> PDGFB </td> <td> 5155 </td> <td> NM_002608 /// NM_033016 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0002548 // monocyte chemotaxis // inferred from direct assay /// 0002576 // platelet degranulation // traceable author statement /// 0003104 // positive regulation of glomerular filtration // inferred from sequence or structural similarity /// 0006260 // DNA replication // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006929 // substrate-dependent cell migration // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009611 // response to wounding // inferred from direct assay /// 0009611 // response to wounding // non-traceable author statement /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010512 // negative regulation of phosphatidylinositol biosynthetic process // inferred from direct assay /// 0010544 // negative regulation of platelet activation // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from direct assay /// 0016049 // cell growth // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030031 // cell projection assembly // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032147 // activation of protein kinase activity // inferred from direct assay /// 0032148 // activation of protein kinase B activity // inferred from direct assay /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0035793 // positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway // inferred from direct assay /// 0038001 // paracrine signaling // inferred from sequence or structural similarity /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from direct assay /// 0043627 // response to estrogen // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045737 // positive regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045743 // positive regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050918 // positive chemotaxis // inferred from direct assay /// 0050921 // positive regulation of chemotaxis // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from direct assay /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from electronic annotation /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from direct assay /// 0071506 // cellular response to mycophenolic acid // inferred from sequence or structural similarity /// 0072126 // positive regulation of glomerular mesangial cell proliferation // inferred from direct assay /// 0072255 // metanephric glomerular mesangial cell development // inferred from sequence or structural similarity /// 0072262 // metanephric glomerular mesangial cell proliferation involved in metanephros development // inferred from electronic annotation /// 0072264 // metanephric glomerular endothelium development // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from mutant phenotype /// 0090280 // positive regulation of calcium ion import // inferred from direct assay /// 1900127 // positive regulation of hyaluronan biosynthetic process // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay /// 2000573 // positive regulation of DNA biosynthetic process // inferred from direct assay /// 2000591 // positive regulation of metanephric mesenchymal cell migration // inferred from direct assay </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // not recorded /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0031093 // platelet alpha granule lumen // traceable author statement </td> <td> 0005161 // platelet-derived growth factor receptor binding // inferred from direct assay /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005161 // platelet-derived growth factor receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from direct assay /// 0016176 // superoxide-generating NADPH oxidase activator activity // inferred from direct assay /// 0042056 // chemoattractant activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from physical interaction </td> <td> 68.38 </td> <td> 117.14 </td> <td> 6.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 203764_at </td> <td> 203764_at </td> <td> NM_014750 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014750.1 /DEF=Homo sapiens KIAA0008 gene product (KIAA0008), mRNA. /FEA=mRNA /GEN=KIAA0008 /PROD=KIAA0008 gene product /DB_XREF=gi:7661851 /UG=Hs.77695 KIAA0008 gene product /FL=gb:D13633.1 gb:NM_014750.1 </td> <td> NM_014750 </td> <td> discs, large (Drosophila) homolog-associated protein 5 </td> <td> DLGAP5 </td> <td> 9787 </td> <td> NM_001146015 /// NM_014750 </td> <td> 0000087 // mitotic M phase // inferred from direct assay /// 0000087 // mitotic M phase // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007079 // mitotic chromosome movement towards spindle pole // non-traceable author statement /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0016311 // dephosphorylation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from sequence or structural similarity /// 0045842 // positive regulation of mitotic metaphase/anaphase transition // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031616 // spindle pole centrosome // inferred from direct assay /// 0031616 // spindle pole centrosome // inferred from sequence or structural similarity </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction </td> <td> 94.42 </td> <td> 160.29 </td> <td> 6.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 219062_s_at </td> <td> 219062_s_at </td> <td> NM_017742 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017742.1 /DEF=Homo sapiens hypothetical protein FLJ20281 (FLJ20281), mRNA. /FEA=mRNA /GEN=FLJ20281 /PROD=hypothetical protein FLJ20281 /DB_XREF=gi:8923259 /UG=Hs.18800 hypothetical protein FLJ20281 /FL=gb:NM_017742.1 </td> <td> NM_017742 </td> <td> zinc finger, CCHC domain containing 2 </td> <td> ZCCHC2 </td> <td> 54877 </td> <td> NM_017742 /// XM_006722493 /// XM_006722494 /// XR_245462 /// XR_430076 </td> <td> 0007154 // cell communication // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 53.40 </td> <td> 82.95 </td> <td> 6.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201456_s_at </td> <td> 201456_s_at </td> <td> AU160695 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU160695 /FEA=EST /DB_XREF=gi:11022216 /DB_XREF=est:AU160695 /CLONE=Y79AA1002240 /UG=Hs.40323 BUB3 (budding uninhibited by benzimidazoles 3, yeast) homolog /FL=gb:BC005138.1 gb:AF047472.1 gb:AF053304.1 gb:AF081496.1 gb:NM_004725.1 </td> <td> AU160695 </td> <td> BUB3 mitotic checkpoint protein </td> <td> BUB3 </td> <td> 9184 </td> <td> NM_001007793 /// NM_004725 </td> <td> 0000070 // mitotic sister chromatid segregation // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0008608 // attachment of spindle microtubules to kinetochore // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051983 // regulation of chromosome segregation // inferred from electronic annotation /// 0071173 // spindle assembly checkpoint // inferred from direct assay </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 93.10 </td> <td> 199.28 </td> <td> 6.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 210087_s_at </td> <td> 210087_s_at </td> <td> AF095727 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF095727.1 /DEF=Homo sapiens myelin protein zero-like protein MPZL1a mRNA, complete cds.  /FEA=mRNA /PROD=myelin protein zero-like protein MPZL1a /DB_XREF=gi:6002658 /UG=Hs.287832 myelin protein zero-like 1 /FL=gb:AF087020.1 gb:NM_003953.1 gb:AF092425.1 gb:AF095726.1 gb:AF095727.1 </td> <td> AF095727 </td> <td> myelin protein zero-like 1 </td> <td> MPZL1 </td> <td> 9019 </td> <td> NM_001146191 /// NM_003953 /// NM_024569 /// XM_006711614 </td> <td> 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement </td> <td> 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -100.70 </td> <td> 169.12 </td> <td> -6.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212573_at </td> <td> 212573_at </td> <td> AF131747 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF131747.1 /DEF=Homo sapiens clone 24951 mRNA sequence. /FEA=mRNA /DB_XREF=gi:4406562 /UG=Hs.167115 KIAA0830 protein </td> <td> AF131747 </td> <td> endonuclease domain containing 1 </td> <td> ENDOD1 </td> <td> 23052 </td> <td> NM_015036 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 56.50 </td> <td> 93.33 </td> <td> 6.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212098_at </td> <td> 212098_at </td> <td> AL134724 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL134724 /FEA=EST /DB_XREF=gi:6602911 /DB_XREF=est:DKFZp547P246_s1 /CLONE=DKFZp547P246 /UG=Hs.4988 Homo sapiens clone 24711 mRNA sequence </td> <td> AL134724 </td> <td> mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase </td> <td> MGAT5 </td> <td> 4249 </td> <td> NM_002410 /// XM_005263666 /// XM_005263668 /// XM_005263669 /// XM_005263670 /// XM_006712534 /// XM_006712535 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // non-traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008375 // acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030144 // alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity // non-traceable author statement </td> <td> 127.45 </td> <td> 243.18 </td> <td> 6.27 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201997_s_at </td> <td> 201997_s_at </td> <td> NM_015001 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015001.1 /DEF=Homo sapiens KIAA0929 protein Msx2 interacting nuclear target (MINT) homolog (KIAA0929), mRNA.  /FEA=mRNA /GEN=KIAA0929 /PROD=KIAA0929 protein Msx2 interacting nuclear target(MINT) homolog /DB_XREF=gi:7657266 /UG=Hs.184245 KIAA0929 protein Msx2 interacting nuclear target (MINT) homolog /FL=gb:NM_015001.1 </td> <td> NM_015001 </td> <td> spen family transcriptional repressor </td> <td> SPEN </td> <td> 23013 </td> <td> NM_015001 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -108.32 </td> <td> 258.04 </td> <td> -6.27 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 214004_s_at </td> <td> 214004_s_at </td> <td> AI806207 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI806207 /FEA=EST /DB_XREF=gi:5392773 /DB_XREF=est:wf26d03.x1 /CLONE=IMAGE:2356709 /UG=Hs.79025 KIAA0096 protein </td> <td> AI806207 </td> <td> vestigial-like family member 4 </td> <td> VGLL4 </td> <td> 9686 </td> <td> NM_001128219 /// NM_001128220 /// NM_001128221 /// NM_001284390 /// NM_001284391 /// NM_014667 /// XM_006713423 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td>  </td> <td> -88.28 </td> <td> 152.81 </td> <td> -6.26 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 204141_at </td> <td> 204141_at </td> <td> NM_001069 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001069.1 /DEF=Homo sapiens tubulin, beta polypeptide (TUBB), mRNA. /FEA=mRNA /GEN=TUBB /PROD=tubulin, beta polypeptide /DB_XREF=gi:4507728 /UG=Hs.179661 tubulin, beta polypeptide /FL=gb:BC001194.1 gb:NM_001069.1 </td> <td> NM_001069 </td> <td> tubulin, beta 2A class IIa </td> <td> TUBB2A </td> <td> 7280 </td> <td> NM_001069 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 112.68 </td> <td> 450.46 </td> <td> 6.26 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202760_s_at </td> <td> 202760_s_at </td> <td> NM_007203 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007203.1 /DEF=Homo sapiens A kinase (PRKA) anchor protein 2 (AKAP2), mRNA. /FEA=mRNA /GEN=AKAP2 /PROD=A kinase (PRKA) anchor protein 2 /DB_XREF=gi:6005708 /UG=Hs.42322 A kinase (PRKA) anchor protein 2 /FL=gb:AB023137.1 gb:NM_007203.1 </td> <td> NM_007203 </td> <td> A kinase (PRKA) anchor protein 2 /// PALM2-AKAP2 readthrough </td> <td> AKAP2 /// PALM2-AKAP2 </td> <td> 11217 /// 445815 </td> <td> NM_001004065 /// NM_001136562 /// NM_001198656 /// NM_007203 /// NM_147150 </td> <td> 0008360 // regulation of cell shape // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0016301 // kinase activity // inferred from electronic annotation /// 0019899 // enzyme binding // non-traceable author statement </td> <td> -347.30 </td> <td> 724.40 </td> <td> -6.26 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 204710_s_at </td> <td> 204710_s_at </td> <td> NM_016003 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016003.1 /DEF=Homo sapiens CGI-50 protein (LOC51623), mRNA. /FEA=mRNA /GEN=LOC51623 /PROD=CGI-50 protein /DB_XREF=gi:7706293 /UG=Hs.279850 CGI-50 protein /FL=gb:AF151808.1 gb:NM_016003.1 </td> <td> NM_016003 </td> <td> WD repeat domain, phosphoinositide interacting 2 </td> <td> WIPI2 </td> <td> 26100 </td> <td> NM_001033518 /// NM_001033519 /// NM_001033520 /// NM_001278299 /// NM_015610 /// NM_016003 /// XM_006715685 </td> <td> 0000045 // autophagic vacuole assembly // inferred from mutant phenotype /// 0000046 // autophagic vacuole fusion // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation </td> <td> 0000421 // autophagic vacuole membrane // not recorded /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // inferred from direct assay </td> <td> -105.33 </td> <td> 376.04 </td> <td> -6.26 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213410_at </td> <td> 213410_at </td> <td> AL050102 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL050102.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586F1019 (from clone DKFZp586F1019); partial cds.  /FEA=mRNA /GEN=DKFZp586F1019 /PROD=hypothetical protein /DB_XREF=gi:4884131 /UG=Hs.227209 DKFZP586F1019 protein </td> <td> AL050102 </td> <td> erythroid differentiation regulatory factor 1 </td> <td> EDRF1 </td> <td> 26098 </td> <td> NM_001202438 /// NM_015608 /// NM_030897 /// NR_110857 /// NR_110858 /// NR_110859 /// XM_005269687 /// XM_005269688 /// XM_005269689 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td>  </td> <td> 56.13 </td> <td> 45.86 </td> <td> 6.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208647_at </td> <td> 208647_at </td> <td> AA872727 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA872727 /FEA=EST /DB_XREF=gi:2968849 /DB_XREF=est:ob11c12.s1 /CLONE=IMAGE:1323382 /UG=Hs.48876 farnesyl-diphosphate farnesyltransferase 1 /FL=gb:L06070.1 gb:L06105.1 gb:NM_004462.1 </td> <td> AA872727 </td> <td> farnesyl-diphosphate farnesyltransferase 1 </td> <td> FDFT1 </td> <td> 2222 </td> <td> NM_001287742 /// NM_001287743 /// NM_001287744 /// NM_001287745 /// NM_001287747 /// NM_001287748 /// NM_001287749 /// NM_001287750 /// NM_001287751 /// NM_001287756 /// NM_004462 /// XM_006716247 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // traceable author statement /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045338 // farnesyl diphosphate metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004310 // farnesyl-diphosphate farnesyltransferase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016765 // transferase activity, transferring alkyl or aryl (other than methyl) groups // inferred from electronic annotation /// 0051996 // squalene synthase activity // inferred from electronic annotation </td> <td> 199.03 </td> <td> 303.29 </td> <td> 6.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 211988_at </td> <td> 211988_at </td> <td> BG289800 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG289800 /FEA=EST /DB_XREF=gi:13045953 /DB_XREF=est:602385095F1 /CLONE=IMAGE:4514135 /UG=Hs.332848 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 /FL=gb:NM_003079.1 </td> <td> BG289800 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 </td> <td> SMARCE1 </td> <td> 6605 </td> <td> NM_003079 </td> <td> 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0000228 // nuclear chromosome // traceable author statement /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from physical interaction /// 0043234 // protein complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // traceable author statement /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from direct assay /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> 104.22 </td> <td> 250.31 </td> <td> 6.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202583_s_at </td> <td> 202583_s_at </td> <td> NM_005493 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005493.1 /DEF=Homo sapiens RAN binding protein 9 (RANBP9), mRNA. /FEA=mRNA /GEN=RANBP9 /PROD=RAN binding protein 9 /DB_XREF=gi:4885570 /UG=Hs.279886 RAN binding protein 9 /FL=gb:AF306510.1 gb:AB008515.1 gb:NM_005493.1 </td> <td> NM_005493 </td> <td> RAN binding protein 9 </td> <td> RANBP9 </td> <td> 10048 </td> <td> NM_005493 /// XM_006714945 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0007020 // microtubule nucleation // non-traceable author statement /// 0007411 // axon guidance // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005875 // microtubule associated complex // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> -119.02 </td> <td> 240.61 </td> <td> -6.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209379_s_at </td> <td> 209379_s_at </td> <td> AF241785 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF241785.1 /DEF=Homo sapiens NPD012 (NPD012) mRNA, complete cds. /FEA=mRNA /GEN=NPD012 /PROD=NPD012 /DB_XREF=gi:12005486 /UG=Hs.81897 KIAA1128 protein /FL=gb:AF241785.1 </td> <td> AF241785 </td> <td> coiled-coil serine-rich protein 2 </td> <td> CCSER2 </td> <td> 54462 </td> <td> NM_001284240 /// NM_001284241 /// NM_001284242 /// NM_001284243 /// NM_018999 /// XM_005269905 /// XM_005269906 /// XM_005269908 /// XM_006717894 /// XM_006717895 </td> <td> 0001578 // microtubule bundle formation // inferred from electronic annotation </td> <td> 0015630 // microtubule cytoskeleton // inferred from electronic annotation </td> <td> 0008017 // microtubule binding // inferred from electronic annotation </td> <td> 63.68 </td> <td> 99.69 </td> <td> 6.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218016_s_at </td> <td> 218016_s_at </td> <td> NM_018119 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018119.1 /DEF=Homo sapiens hypothetical protein FLJ10509 (FLJ10509), mRNA. /FEA=mRNA /GEN=FLJ10509 /PROD=hypothetical protein FLJ10509 /DB_XREF=gi:8922476 /UG=Hs.274319 hypothetical protein FLJ10509 /FL=gb:BC000285.1 gb:NM_018119.1 </td> <td> NM_018119 </td> <td> DNA-directed RNA polymerase III subunit RPC5-like /// polymerase (RNA) III (DNA directed) polypeptide E (80kD) </td> <td> LOC101060521 /// POLR3E </td> <td> 55718 /// 101060521 </td> <td> NM_001258033 /// NM_001258034 /// NM_001258035 /// NM_001258036 /// NM_018119 /// NR_047581 /// XM_005276498 /// XM_006721063 /// XM_006726613 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051607 // defense response to virus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005666 // DNA-directed RNA polymerase III complex // not recorded /// 0005666 // DNA-directed RNA polymerase III complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0001056 // RNA polymerase III activity // not recorded /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation </td> <td> 55.23 </td> <td> 91.66 </td> <td> 6.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 210916_s_at </td> <td> 210916_s_at </td> <td> AF098641 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF098641.1 /DEF=Homo sapiens CD44 isoform RC (CD44) mRNA, complete cds. /FEA=mRNA /GEN=CD44 /PROD=CD44 isoform RC /DB_XREF=gi:3832517 /UG=Hs.306278 Homo sapiens CD44 isoform RC (CD44) mRNA, complete cds /FL=gb:AF098641.1 </td> <td> AF098641 </td> <td> CD44 molecule (Indian blood group) </td> <td> CD44 </td> <td> 960 </td> <td> NM_000610 /// NM_001001389 /// NM_001001390 /// NM_001001391 /// NM_001001392 /// NM_001202555 /// NM_001202556 /// NM_001202557 /// XM_005253231 /// XM_005253232 /// XM_005253233 /// XM_005253234 /// XM_005253235 /// XM_005253238 /// XM_005253239 /// XM_005253240 /// XM_006718388 /// XM_006718389 /// XM_006718390 </td> <td> 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0002246 // wound healing involved in inflammatory response // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030212 // hyaluronan metabolic process // traceable author statement /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0030214 // hyaluronan catabolic process // traceable author statement /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0051216 // cartilage development // inferred from expression pattern /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060442 // branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070487 // monocyte aggregation // inferred from mutant phenotype /// 1900625 // positive regulation of monocyte aggregation // inferred from mutant phenotype /// 1902166 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004415 // hyalurononglucosaminidase activity // inferred from direct assay /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0005540 // hyaluronic acid binding // inferred from direct assay /// 0005540 // hyaluronic acid binding // non-traceable author statement </td> <td> -54.25 </td> <td> 47.27 </td> <td> -6.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 204115_at </td> <td> 204115_at </td> <td> NM_004126 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004126.1 /DEF=Homo sapiens guanine nucleotide binding protein 11 (GNG11), mRNA. /FEA=mRNA /GEN=GNG11 /PROD=guanine nucleotide binding protein 11 /DB_XREF=gi:4758447 /UG=Hs.83381 guanine nucleotide binding protein 11 /FL=gb:NM_004126.1 gb:U31384.1 </td> <td> NM_004126 </td> <td> guanine nucleotide binding protein (G protein), gamma 11 </td> <td> GNG11 </td> <td> 2791 </td> <td> NM_004126 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0006184 // GTP catabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement </td> <td> 0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation </td> <td> 523.65 </td> <td> 1094.47 </td> <td> 6.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202269_x_at </td> <td> 202269_x_at </td> <td> BC002666 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002666.1 /DEF=Homo sapiens, guanylate binding protein 1, interferon-inducible, 67kD, clone MGC:3949, mRNA, complete cds.  /FEA=mRNA /PROD=guanylate binding protein 1,interferon-inducible, 67kD /DB_XREF=gi:12803662 /UG=Hs.62661 guanylate binding protein 1, interferon-inducible, 67kD /FL=gb:BC002666.1 gb:M55542.1 gb:NM_002053.1 </td> <td> BC002666 </td> <td> guanylate binding protein 1, interferon-inducible </td> <td> GBP1 </td> <td> 2633 </td> <td> NM_002053 /// XM_006710573 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0051607 // defense response to virus // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -72.50 </td> <td> 71.22 </td> <td> -6.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200892_s_at </td> <td> 200892_s_at </td> <td> BC000451 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000451.1 /DEF=Homo sapiens, splicing factor, arginineserine-rich (transformer 2 Drosophila homolog) 10, clone MGC:8454, mRNA, complete cds.  /FEA=mRNA /PROD=splicing factor, arginineserine-rich(transformer 2 Drosophila homolog) 10 /DB_XREF=gi:12653362 /UG=Hs.30035 splicing factor, arginineserine-rich (transformer 2 Drosophila homolog) 10 /FL=gb:BC000160.1 gb:BC000451.1 gb:U61267.1 gb:U68063.1 gb:NM_004593.1 </td> <td> BC000451 </td> <td> transformer 2 beta homolog (Drosophila) </td> <td> TRA2B </td> <td> 6434 </td> <td> NM_001243879 /// NM_004593 /// XM_005247703 /// XM_006713724 </td> <td> 0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0048026 // positive regulation of mRNA splicing, via spliceosome // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 146.43 </td> <td> 443.84 </td> <td> 6.22 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212498_at </td> <td> 212498_at </td> <td> AF056433 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF056433.1 /DEF=Homo sapiens clone FBD3 Cri-du-chat critical region mRNA. /FEA=mRNA /DB_XREF=gi:3044151 /UG=Hs.8078 Homo sapiens clone FBD3 Cri-du-chat critical region mRNA </td> <td> AF056433 </td> <td> membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase </td> <td> MARCH6 </td> <td> 10299 </td> <td> NM_001270660 /// NM_001270661 /// NM_005885 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0031624 // ubiquitin conjugating enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 123.97 </td> <td> 172.31 </td> <td> 6.21 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 204348_s_at </td> <td> 204348_s_at </td> <td> NM_013410 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013410.1 /DEF=Homo sapiens adenylate kinase 3 (AK3), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=AK3 /PROD=adenylate kinase 3 /DB_XREF=gi:8051578 /UG=Hs.274691 adenylate kinase 3 /FL=gb:NM_013410.1 </td> <td> NM_013410 </td> <td> adenylate kinase 4 /// adenylate kinase 4, mitochondrial-like </td> <td> AK4 /// LOC100507855 </td> <td> 205 /// 100507855 </td> <td> NM_001005353 /// NM_013410 /// NM_203464 /// XM_003119530 </td> <td> 0001889 // liver development // inferred from electronic annotation /// 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006165 // nucleoside diphosphate phosphorylation // inferred from direct assay /// 0006172 // ADP biosynthetic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0009142 // nucleoside triphosphate biosynthetic process // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018885 // carbon tetrachloride metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043643 // tetracycline metabolic process // inferred from electronic annotation /// 0046033 // AMP metabolic process // inferred from direct assay /// 0046034 // ATP metabolic process // inferred from direct assay /// 0046039 // GTP metabolic process // inferred from direct assay /// 0046939 // nucleotide phosphorylation // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004017 // adenylate kinase activity // inferred from direct assay /// 0004550 // nucleoside diphosphate kinase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016776 // phosphotransferase activity, phosphate group as acceptor // inferred from electronic annotation /// 0019201 // nucleotide kinase activity // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation /// 0046899 // nucleoside triphosphate adenylate kinase activity // inferred from direct assay </td> <td> -136.48 </td> <td> 131.96 </td> <td> -6.21 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 221235_s_at </td> <td> 221235_s_at </td> <td> NM_030825 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030825.1 /DEF=Homo sapiens hypothetical protein FLJ22294 (FLJ22294), mRNA. /FEA=mRNA /GEN=FLJ22294 /PROD=hypothetical protein FLJ22294 /DB_XREF=gi:13540497 /FL=gb:NM_030825.1 </td> <td> NM_030825 </td> <td> transforming growth factor, beta receptor associated protein 1 </td> <td> TGFBRAP1 </td> <td> 9392 </td> <td> NM_001142621 /// NM_004257 /// XM_006712860 /// XM_006712861 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005160 // transforming growth factor beta receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from direct assay </td> <td> 66.52 </td> <td> 145.41 </td> <td> 6.21 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200753_x_at </td> <td> 200753_x_at </td> <td> BE866585 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE866585 /FEA=EST /DB_XREF=gi:10315361 /DB_XREF=est:601678773F1 /CLONE=IMAGE:3961243 /UG=Hs.73965 splicing factor, arginineserine-rich 2 /FL=gb:BC000339.1 gb:BC001303.1 gb:M90104.1 gb:NM_003016.1 </td> <td> BE866585 </td> <td> microRNA 636 /// serine/arginine-rich splicing factor 2 </td> <td> MIR636 /// SRSF2 </td> <td> 6427 /// 693221 </td> <td> NM_001195427 /// NM_003016 /// NR_030366 /// NR_036608 /// XR_429913 /// XR_429914 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 2001141 // regulation of RNA biosynthetic process // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0016605 // PML body // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 162.38 </td> <td> 297.51 </td> <td> 6.21 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 217886_at </td> <td> 217886_at </td> <td> BF213575 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF213575 /FEA=EST /DB_XREF=gi:11107161 /DB_XREF=est:601845379F1 /CLONE=IMAGE:4070610 /UG=Hs.79095 epidermal growth factor receptor pathway substrate 15 /FL=gb:NM_001981.1 gb:U07707.1 </td> <td> BF213575 </td> <td> epidermal growth factor receptor pathway substrate 15 </td> <td> EPS15 </td> <td> 2060 </td> <td> NM_001159969 /// NM_001981 /// XM_005270618 /// XM_006710446 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016050 // vesicle organization // traceable author statement /// 0032456 // endocytic recycling // inferred by curator /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048268 // clathrin coat assembly // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005905 // coated pit // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0060170 // ciliary membrane // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 63.45 </td> <td> 86.65 </td> <td> 6.20 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 217915_s_at </td> <td> 217915_s_at </td> <td> NM_016304 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016304.1 /DEF=Homo sapiens 60S ribosomal protein L30 isolog (LOC51187), mRNA. /FEA=mRNA /GEN=LOC51187 /PROD=60S ribosomal protein L30 isolog /DB_XREF=gi:10047101 /UG=Hs.284162 60S ribosomal protein L30 isolog /FL=gb:NM_016304.1 gb:AF060926.1 gb:AF212226.1 gb:BC005344.1 gb:AF201949.1 gb:AF165521.1 </td> <td> NM_016304 </td> <td> ribosomal L24 domain containing 1 </td> <td> RSL24D1 </td> <td> 51187 </td> <td> NM_016304 </td> <td> 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation </td> <td>  </td> <td> -335.90 </td> <td> 551.88 </td> <td> -6.20 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218364_at </td> <td> 218364_at </td> <td> NM_017724 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017724.1 /DEF=Homo sapiens leucine rich repeat (in FLII) interacting protein 2 (LRRFIP2), mRNA.  /FEA=mRNA /GEN=LRRFIP2 /PROD=leucine rich repeat (in FLII) interactingprotein 2 /DB_XREF=gi:8923223 /UG=Hs.57672 leucine rich repeat (in FLII) interacting protein 2 /FL=gb:NM_017724.1 </td> <td> NM_017724 </td> <td> leucine rich repeat (in FLII) interacting protein 2 </td> <td> LRRFIP2 </td> <td> 9209 </td> <td> NM_001134369 /// NM_001282691 /// NM_006309 /// NM_017724 /// XM_005265538 /// XM_005265539 /// XM_005265540 /// XM_005265550 /// XM_005265551 /// XM_005265553 /// XM_005265554 /// XM_005265555 /// XM_005265556 /// XM_005265557 /// XM_006713385 /// XM_006713386 /// XM_006713387 /// XM_006713388 /// XM_006713389 /// XM_006713390 /// XM_006713391 /// XM_006713392 /// XM_006713393 /// XM_006713394 /// XM_006713395 /// XM_006713396 /// XM_006713397 /// XM_006713398 /// XM_006713399 /// XM_006713400 /// XM_006713401 /// XM_006713402 /// XM_006713403 /// XM_006713404 </td> <td> 0016055 // Wnt signaling pathway // inferred from electronic annotation </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030275 // LRR domain binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -55.75 </td> <td> 103.50 </td> <td> -6.19 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 210260_s_at </td> <td> 210260_s_at </td> <td> BC005352 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005352.1 /DEF=Homo sapiens, TNF-induced protein, clone MGC:12451, mRNA, complete cds.  /FEA=mRNA /PROD=TNF-induced protein /DB_XREF=gi:13529163 /UG=Hs.17839 TNF-induced protein /FL=gb:BC005352.1 gb:AF099935.1 </td> <td> BC005352 </td> <td> tumor necrosis factor, alpha-induced protein 8 </td> <td> TNFAIP8 </td> <td> 25816 </td> <td> NM_001077654 /// NM_001286813 /// NM_001286814 /// NM_001286815 /// NM_001286817 /// NM_014350 /// XM_006714584 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay </td> <td> 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from mutant phenotype </td> <td> -265.63 </td> <td> 178.64 </td> <td> -6.18 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202074_s_at </td> <td> 202074_s_at </td> <td> NM_021980 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021980.1 /DEF=Homo sapiens tumor necrosis factor alpha-inducible cellular protein containing leucine zipper domains; Huntingtin interacting protein L; transcrption factor IIIA-interacting protein (FIP2), mRNA.  /FEA=mRNA /GEN=FIP2 /PROD=tumor necrosis factor alpha-inducible cellularprotein containing leucine zipper domains; Huntingtininteracting protein L; transcrption factorIIIA-interacting protein /DB_XREF=gi:11415041 /UG=Hs.278898 tumor necrosis factor alpha-inducible cellular protein containing leucine zipper domains; Huntingtin interacting protein L; transcrption factor IIIA-interacting protein /FL=gb:NM_021980.1 </td> <td> NM_021980 </td> <td> optineurin </td> <td> OPTN </td> <td> 10133 </td> <td> NM_001008211 /// NM_001008212 /// NM_001008213 /// NM_021980 /// XM_005252336 /// XM_005252337 /// XM_005252338 </td> <td> 0000042 // protein targeting to Golgi // inferred from mutant phenotype /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001920 // negative regulation of receptor recycling // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0016236 // macroautophagy // inferred from direct assay /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0043001 // Golgi to plasma membrane protein transport // inferred from mutant phenotype /// 0050829 // defense response to Gram-negative bacterium // inferred from mutant phenotype /// 0090161 // Golgi ribbon formation // inferred from direct assay </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay </td> <td> -317.80 </td> <td> 354.93 </td> <td> -6.16 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 204908_s_at </td> <td> 204908_s_at </td> <td> NM_005178 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005178.1 /DEF=Homo sapiens B-cell CLLlymphoma 3 (BCL3), mRNA. /FEA=mRNA /GEN=BCL3 /PROD=B-cell CLLlymphoma 3 /DB_XREF=gi:4885086 /UG=Hs.31210 B-cell CLLlymphoma 3 /FL=gb:M31732.1 gb:NM_005178.1 </td> <td> NM_005178 </td> <td> B-cell CLL/lymphoma 3 /// microRNA 8085 </td> <td> BCL3 /// MIR8085 </td> <td> 602 /// 102465879 </td> <td> NM_005178 /// NR_107052 /// XM_005259129 </td> <td> 0000060 // protein import into nucleus, translocation // inferred from mutant phenotype /// 0002268 // follicular dendritic cell differentiation // inferred from electronic annotation /// 0002315 // marginal zone B cell differentiation // inferred from electronic annotation /// 0002455 // humoral immune response mediated by circulating immunoglobulin // inferred from electronic annotation /// 0002467 // germinal center formation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0007249 // I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0009615 // response to virus // inferred from direct assay /// 0010225 // response to UV-C // inferred from direct assay /// 0019730 // antimicrobial humoral response // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0042088 // T-helper 1 type immune response // inferred from electronic annotation /// 0042345 // regulation of NF-kappaB import into nucleus // inferred from expression pattern /// 0042536 // negative regulation of tumor necrosis factor biosynthetic process // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from mutant phenotype /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045064 // T-helper 2 cell differentiation // inferred from electronic annotation /// 0045082 // positive regulation of interleukin-10 biosynthetic process // inferred from electronic annotation /// 0045415 // negative regulation of interleukin-8 biosynthetic process // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0051101 // regulation of DNA binding // inferred from expression pattern /// 0051457 // maintenance of protein location in nucleus // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0032996 // Bcl3-Bcl10 complex // inferred from direct assay /// 0033257 // Bcl3/NF-kappaB2 complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0045171 // intercellular bridge // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0030674 // protein binding, bridging // traceable author statement </td> <td> -50.15 </td> <td> 67.58 </td> <td> -6.16 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 204119_s_at </td> <td> 204119_s_at </td> <td> U90339 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U90339.1 /DEF=Human adenosine kinase short form mRNA, complete cds. /FEA=mRNA /PROD=adenosine kinase short form /DB_XREF=gi:1906010 /UG=Hs.94382 adenosine kinase /FL=gb:U50196.1 gb:BC003568.1 gb:U90339.1 gb:NM_001123.1 </td> <td> U90339 </td> <td> adenosine kinase </td> <td> ADK </td> <td> 132 </td> <td> NM_001123 /// NM_001202449 /// NM_001202450 /// NM_006721 /// XM_005269538 </td> <td> 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006166 // purine ribonucleoside salvage // inferred from electronic annotation /// 0006167 // AMP biosynthetic process // inferred from electronic annotation /// 0006175 // dATP biosynthetic process // inferred from electronic annotation /// 0009156 // ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032922 // circadian regulation of gene expression // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0043101 // purine-containing compound salvage // traceable author statement /// 0044209 // AMP salvage // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0044342 // type B pancreatic cell proliferation // inferred from electronic annotation /// 0046085 // adenosine metabolic process // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004001 // adenosine kinase activity // not recorded /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -113.28 </td> <td> 341.61 </td> <td> -6.15 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212082_s_at </td> <td> 212082_s_at </td> <td> BE734356 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE734356 /FEA=EST /DB_XREF=gi:10148348 /DB_XREF=est:601565603F1 /CLONE=IMAGE:3840385 /UG=Hs.77385 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle </td> <td> BE734356 </td> <td> myosin, light chain 6, alkali, smooth muscle and non-muscle </td> <td> MYL6 </td> <td> 4637 </td> <td> NM_021019 /// NM_079423 /// NM_079425 </td> <td> 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007519 // skeletal muscle tissue development // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030049 // muscle filament sliding // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016459 // myosin complex // traceable author statement /// 0016461 // unconventional myosin complex // traceable author statement /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from physical interaction /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071564 // npBAF complex // inferred from electronic annotation /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from electronic annotation /// 0071565 // nBAF complex // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003774 // motor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // inferred from direct assay /// 0030898 // actin-dependent ATPase activity // inferred from sequence or structural similarity /// 0031492 // nucleosomal DNA binding // inferred from direct assay </td> <td> 464.62 </td> <td> 2246.34 </td> <td> 6.15 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201362_at </td> <td> 201362_at </td> <td> AF205218 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF205218.1 /DEF=Homo sapiens NS1-binding protein-like protein mRNA, complete cds. /FEA=mRNA /PROD=NS1-binding protein-like protein /DB_XREF=gi:12003206 /UG=Hs.197298 NS1-binding protein /FL=gb:AF205218.1 gb:AB020657.1 gb:AF161553.1 gb:NM_016389.1 </td> <td> AF205218 </td> <td> influenza virus NS1A binding protein </td> <td> IVNS1ABP </td> <td> 10625 </td> <td> NM_006469 /// NM_016389 /// XM_005244843 </td> <td> 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005667 // transcription factor complex // traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 65.43 </td> <td> 75.21 </td> <td> 6.14 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 216342_x_at </td> <td> 216342_x_at </td> <td> AL121916 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL121916 /DEF=Human DNA sequence from clone RP1-189G13 on chromosome 20. Contains an RPL7A (60S ribosomal protein L7A) (SURF3) pseudogene, part of an RPS4 (40S ribosomal protein S4) pseudogene, ESTs, STSs and GSSs /FEA=CDS_2 /DB_XREF=gi:7406639 /UG=Hs.283838 Human DNA sequence from clone RP1-189G13 on chromosome 20. Contains an RPL7A (60S ribosomal protein L7A) (SURF3) pseudogene, part of an RPS4 (40S ribosomal protein S4) pseudogene, ESTs, STSs and GSSs </td> <td> AL121916 </td> <td> ribosomal protein S4X pseudogene 2 /// </td> <td> RPS4XP2 /// RPS4XP2 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -374.50 </td> <td> 1999.70 </td> <td> -6.14 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 211976_at </td> <td> 211976_at </td> <td> AK026168 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026168.1 /DEF=Homo sapiens cDNA: FLJ22515 fis, clone HRC12122, highly similar to AF052101 Homo sapiens clone 23872 mRNA sequence.  /FEA=mRNA /DB_XREF=gi:10438931 /UG=Hs.188882 Homo sapiens cDNA: FLJ21862 fis, clone HEP02321, highly similar to AF052101 Homo sapiens clone 23872 mRNA sequence </td> <td> AK026168 </td> <td> nudix (nucleoside diphosphate linked moiety X)-type motif 3 </td> <td> NUDT3 </td> <td> 11165 </td> <td> NM_006703 </td> <td> 0007267 // cell-cell signaling // traceable author statement /// 0015961 // diadenosine polyphosphate catabolic process // traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0071544 // diphosphoinositol polyphosphate catabolic process // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052840 // inositol diphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052841 // inositol bisdiphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052842 // inositol diphosphate pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052843 // inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052844 // inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052845 // inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052846 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity // inferred from electronic annotation /// 0052847 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation /// 0052848 // inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation </td> <td> 98.90 </td> <td> 188.93 </td> <td> 6.14 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218276_s_at </td> <td> 218276_s_at </td> <td> NM_021818 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021818.1 /DEF=Homo sapiens WW Domain-Containing Gene (WW45), mRNA. /FEA=mRNA /GEN=WW45 /PROD=WW Domain-Containing Gene /DB_XREF=gi:11141888 /UG=Hs.288906 WW Domain-Containing Gene /FL=gb:NM_021818.1 </td> <td> NM_021818 </td> <td> salvador family WW domain containing protein 1 </td> <td> SAV1 </td> <td> 60485 </td> <td> NM_021818 </td> <td> 0001942 // hair follicle development // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0035329 // hippo signaling // inferred from sequence or structural similarity /// 0035329 // hippo signaling // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046620 // regulation of organ growth // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060487 // lung epithelial cell differentiation // inferred from electronic annotation /// 0060575 // intestinal epithelial cell differentiation // inferred from electronic annotation /// 2000036 // regulation of stem cell maintenance // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -72.40 </td> <td> 75.02 </td> <td> -6.14 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201196_s_at </td> <td> 201196_s_at </td> <td> M21154 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M21154.1 /DEF=Human S-adenosylmethionine decarboxylase mRNA, complete cds. /FEA=mRNA /GEN=AMD2 /DB_XREF=gi:178517 /UG=Hs.262476 S-adenosylmethionine decarboxylase 1 /FL=gb:BC000171.2 gb:M21154.1 gb:NM_001634.3 </td> <td> M21154 </td> <td> adenosylmethionine decarboxylase 1 </td> <td> AMD1 </td> <td> 262 </td> <td> NM_001033059 /// NM_001287214 /// NM_001287215 /// NM_001287216 /// NM_001634 /// NR_109768 </td> <td> 0006557 // S-adenosylmethioninamine biosynthetic process // inferred from electronic annotation /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // inferred from electronic annotation /// 0008295 // spermidine biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0004014 // adenosylmethionine decarboxylase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation </td> <td> 73.93 </td> <td> 146.19 </td> <td> 6.14 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 204372_s_at </td> <td> 204372_s_at </td> <td> NM_003685 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003685.1 /DEF=Homo sapiens KH-type splicing regulatory protein (FUSE binding protein 2) (KHSRP), mRNA.  /FEA=mRNA /GEN=KHSRP /PROD=KH-type splicing regulatory protein (FUSEbinding protein 2) /DB_XREF=gi:4504864 /UG=Hs.91142 KH-type splicing regulatory protein (FUSE binding protein 2) /FL=gb:U94832.1 gb:NM_003685.1 </td> <td> NM_003685 </td> <td> KH-type splicing regulatory protein </td> <td> KHSRP </td> <td> 8570 </td> <td> NM_003685 /// XM_005259668 </td> <td> 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 90.53 </td> <td> 297.29 </td> <td> 6.13 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 207812_s_at </td> <td> 207812_s_at </td> <td> NM_015530 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015530.1 /DEF=Homo sapiens DKFZP434D156 protein (DKFZP434D156), mRNA. /FEA=mRNA /GEN=DKFZP434D156 /PROD=DKFZP434D156 protein /DB_XREF=gi:7661569 /UG=Hs.6880 DKFZP434D156 protein /FL=gb:NM_015530.1 </td> <td> NM_015530 </td> <td> golgi reassembly stacking protein 2, 55kDa </td> <td> GORASP2 </td> <td> 26003 </td> <td> NM_001201428 /// NM_015530 /// XM_006712408 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006996 // organelle organization // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 86.47 </td> <td> 344.81 </td> <td> 6.13 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 210594_x_at </td> <td> 210594_x_at </td> <td> AF239756 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF239756.1 /DEF=Homo sapiens PZR1b mRNA, complete cds. /FEA=mRNA /PROD=PZR1b /DB_XREF=gi:7542562 /UG=Hs.287832 myelin protein zero-like 1 /FL=gb:AF239756.1 </td> <td> AF239756 </td> <td> myelin protein zero-like 1 </td> <td> MPZL1 </td> <td> 9019 </td> <td> NM_001146191 /// NM_003953 /// NM_024569 /// XM_006711614 </td> <td> 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement </td> <td> 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -116.40 </td> <td> 171.95 </td> <td> -6.13 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201010_s_at </td> <td> 201010_s_at </td> <td> NM_006472 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006472.1 /DEF=Homo sapiens upregulated by 1,25-dihydroxyvitamin D-3 (VDUP1), mRNA.  /FEA=mRNA /GEN=VDUP1 /PROD=upregulated by 1,25-dihydroxyvitamin D-3 /DB_XREF=gi:5454161 /UG=Hs.179526 upregulated by 1,25-dihydroxyvitamin D-3 /FL=gb:NM_006472.1 gb:S73591.1 </td> <td> NM_006472 </td> <td> thioredoxin interacting protein </td> <td> TXNIP </td> <td> 10628 </td> <td> NM_006472 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from direct assay /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051782 // negative regulation of cell division // inferred from direct assay /// 0071228 // cellular response to tumor cell // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> -226.38 </td> <td> 180.29 </td> <td> -6.12 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 37384_at </td> <td> 37384_at </td> <td> D86995 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. D13640:Human mRNA for KIAA0015 gene, complete cds /cds=(106,1470) /gb=D13640 /gi=286006 /ug=Hs.77961 /len=5134 </td> <td> D86995 </td> <td> protein phosphatase, Mg2+/Mn2+ dependent, 1F </td> <td> PPM1F </td> <td> 9647 </td> <td> NM_014634 </td> <td> 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010634 // positive regulation of epithelial cell migration // inferred from mutant phenotype /// 0010811 // positive regulation of cell-substrate adhesion // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016576 // histone dephosphorylation // inferred from electronic annotation /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0035970 // peptidyl-threonine dephosphorylation // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0044387 // negative regulation of protein kinase activity by regulation of protein phosphorylation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045927 // positive regulation of growth // inferred from mutant phenotype /// 0050921 // positive regulation of chemotaxis // inferred from mutant phenotype /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0051894 // positive regulation of focal adhesion assembly // inferred from mutant phenotype /// 0097193 // intrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0005829 // cytosol // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 113.85 </td> <td> 192.85 </td> <td> 6.12 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 203278_s_at </td> <td> 203278_s_at </td> <td> NM_016621 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016621.1 /DEF=Homo sapiens hypothetical protein (LOC51317), mRNA. /FEA=mRNA /GEN=LOC51317 /PROD=hypothetical protein /DB_XREF=gi:7706159 /UG=Hs.106826 KIAA1696 protein /FL=gb:AF208848.1 gb:NM_016621.1 </td> <td> NM_016621 </td> <td> PHD finger protein 21A </td> <td> PHF21A </td> <td> 51317 </td> <td> NM_001101802 /// NM_016621 /// XM_005252962 /// XM_005252963 /// XM_005252964 /// XM_005252965 /// XM_005252967 /// XM_005252970 /// XM_006718247 /// XM_006718248 /// XR_242810 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001967 // suckling behavior // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation </td> <td> 0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -81.02 </td> <td> 75.51 </td> <td> -6.11 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218573_at </td> <td> 218573_at </td> <td> NM_014061 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014061.1 /DEF=Homo sapiens APR-1 protein (APR-1), mRNA. /FEA=mRNA /GEN=APR-1 /PROD=APR-1 protein /DB_XREF=gi:7661529 /UG=Hs.279819 APR-1 protein /FL=gb:AF320912.1 gb:AF143235.3 gb:NM_014061.1 </td> <td> NM_014061 </td> <td> melanoma antigen family H, 1 </td> <td> MAGEH1 </td> <td> 28986 </td> <td> NM_014061 </td> <td> 0006915 // apoptotic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td>  </td> <td> 65.22 </td> <td> 81.26 </td> <td> 6.11 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 203987_at </td> <td> 203987_at </td> <td> NM_003506 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003506.1 /DEF=Homo sapiens frizzled (Drosophila) homolog 6 (FZD6), mRNA. /FEA=mRNA /GEN=FZD6 /PROD=frizzled 6 /DB_XREF=gi:4503830 /UG=Hs.114218 frizzled (Drosophila) homolog 6 /FL=gb:AB012911.1 gb:NM_003506.1 gb:AF072873.1 </td> <td> NM_003506 </td> <td> frizzled class receptor 6 </td> <td> FZD6 </td> <td> 8323 </td> <td> NM_001164615 /// NM_001164616 /// NM_003506 /// XR_428385 </td> <td> 0001525 // angiogenesis // not recorded /// 0001736 // establishment of planar polarity // not recorded /// 0001843 // neural tube closure // not recorded /// 0001942 // hair follicle development // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007199 // G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger // not recorded /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007409 // axonogenesis // not recorded /// 0008406 // gonad development // not recorded /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030168 // platelet activation // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0033278 // cell proliferation in midbrain // not recorded /// 0035567 // non-canonical Wnt signaling pathway // inferred from direct assay /// 0042472 // inner ear morphogenesis // not recorded /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0060071 // Wnt signaling pathway, planar cell polarity pathway // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016327 // apicolateral plasma membrane // not recorded /// 0032589 // neuron projection membrane // not recorded /// 0045177 // apical part of cell // not recorded </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // not recorded /// 0017147 // Wnt-protein binding // inferred from sequence or structural similarity /// 0030165 // PDZ domain binding // not recorded /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042813 // Wnt-activated receptor activity // inferred from direct assay </td> <td> -304.05 </td> <td> 420.73 </td> <td> -6.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 206085_s_at </td> <td> 206085_s_at </td> <td> NM_001902 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001902.1 /DEF=Homo sapiens cystathionase (cystathionine gamma-lyase) (CTH), mRNA. /FEA=mRNA /GEN=CTH /PROD=cystathionase (cystathionine gamma-lyase) /DB_XREF=gi:4503124 /UG=Hs.19904 cystathionase (cystathionine gamma-lyase) /FL=gb:NM_001902.1 </td> <td> NM_001902 </td> <td> cystathionine gamma-lyase </td> <td> CTH </td> <td> 1491 </td> <td> NM_001190463 /// NM_001902 /// NM_153742 /// XM_005270509 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0000098 // sulfur amino acid catabolic process // traceable author statement /// 0006534 // cysteine metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0018272 // protein-pyridoxal-5-phosphate linkage via peptidyl-N6-pyridoxal phosphate-L-lysine // inferred from direct assay /// 0019344 // cysteine biosynthetic process // inferred from direct assay /// 0019344 // cysteine biosynthetic process // inferred from electronic annotation /// 0019346 // transsulfuration // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0044524 // protein sulfhydration // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from physical interaction /// 0070814 // hydrogen sulfide biosynthetic process // inferred from direct assay /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004123 // cystathionine gamma-lyase activity // inferred from direct assay /// 0004123 // cystathionine gamma-lyase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016846 // carbon-sulfur lyase activity // traceable author statement /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0044540 // L-cystine L-cysteine-lyase (deaminating) // inferred from mutant phenotype /// 0047982 // homocysteine desulfhydrase activity // traceable author statement /// 0080146 // L-cysteine desulfhydrase activity // traceable author statement </td> <td> -56.30 </td> <td> 40.27 </td> <td> -6.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213032_at </td> <td> 213032_at </td> <td> AI186739 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI186739 /FEA=EST /DB_XREF=gi:3737377 /DB_XREF=est:qe79c01.x1 /CLONE=IMAGE:1745184 /UG=Hs.326416 Homo sapiens mRNA; cDNA DKFZp564H1916 (from clone DKFZp564H1916) </td> <td> AI186739 </td> <td> nuclear factor I/B </td> <td> NFIB </td> <td> 4781 </td> <td> NM_001190737 /// NM_001190738 /// NM_001282787 /// NM_005596 /// XM_005251467 /// XM_005251468 /// XM_005251469 /// XM_005251470 /// XM_005251471 /// XM_006716773 /// XM_006716774 /// XM_006716775 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from sequence or structural similarity /// 0021740 // principal sensory nucleus of trigeminal nerve development // inferred from sequence or structural similarity /// 0021960 // anterior commissure morphogenesis // inferred from sequence or structural similarity /// 0030324 // lung development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060486 // Clara cell differentiation // inferred from sequence or structural similarity /// 0060509 // Type I pneumocyte differentiation // inferred from sequence or structural similarity /// 0060510 // Type II pneumocyte differentiation // inferred from sequence or structural similarity /// 0061141 // lung ciliated cell differentiation // inferred from sequence or structural similarity /// 0071679 // commissural neuron axon guidance // inferred from sequence or structural similarity /// 2000791 // negative regulation of mesenchymal cell proliferation involved in lung development // inferred from sequence or structural similarity /// 2000795 // negative regulation of epithelial cell proliferation involved in lung morphogenesis // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0044300 // cerebellar mossy fiber // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation </td> <td> 97.97 </td> <td> 138.56 </td> <td> 6.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 220942_x_at </td> <td> 220942_x_at </td> <td> NM_014367 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014367.1 /DEF=Homo sapiens hypothetical protein, estradiol-induced (E2IG5), mRNA. /FEA=mRNA /GEN=E2IG5 /PROD=hypothetical protein, estradiol-induced /DB_XREF=gi:7657049 /UG=Hs.5243 hypothetical protein, estradiol-induced /FL=gb:AF191020.1 gb:NM_014367.1 </td> <td> NM_014367 </td> <td> family with sequence similarity 162, member A </td> <td> FAM162A </td> <td> 26355 </td> <td> NM_014367 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006927 // transformed cell apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -240.37 </td> <td> 391.56 </td> <td> -6.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 219649_at </td> <td> 219649_at </td> <td> NM_013339 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013339.1 /DEF=Homo sapiens dolichyl-P-Glc:Man9GlcNAc2-PP-dolichylglucosyltransferase (ALG6), mRNA.  /FEA=mRNA /GEN=ALG6 /PROD=dolichyl-P-Glc:Man9GlcNAc2-PP-dolichylglucosyltransferase /DB_XREF=gi:7019324 /UG=Hs.80042 dolichyl-P-Glc:Man9GlcNAc2-PP-dolichylglucosyltransferase /FL=gb:AF063604.1 gb:BC001253.1 gb:AF102851.1 gb:NM_013339.1 </td> <td> NM_013339 </td> <td> ALG6, alpha-1,3-glucosyltransferase </td> <td> ALG6 </td> <td> 29929 </td> <td> NM_013339 /// XM_005270788 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // inferred from direct assay /// 0006487 // protein N-linked glycosylation // inferred from genetic interaction /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046527 // glucosyltransferase activity // inferred from direct assay </td> <td> 87.10 </td> <td> 154.32 </td> <td> 6.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202741_at </td> <td> 202741_at </td> <td> AA130247 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA130247 /FEA=EST /DB_XREF=gi:1691251 /DB_XREF=est:zl38g12.s1 /CLONE=IMAGE:504262 /UG=Hs.87773 protein kinase, cAMP-dependent, catalytic, beta /FL=gb:M34181.1 gb:NM_002731.1 </td> <td> AA130247 </td> <td> protein kinase, cAMP-dependent, catalytic, beta </td> <td> PRKACB </td> <td> 5567 </td> <td> NM_001242857 /// NM_001242858 /// NM_001242859 /// NM_001242860 /// NM_001242861 /// NM_001242862 /// NM_002731 /// NM_182948 /// NM_207578 /// XM_005271015 /// XM_005271016 /// XM_005271017 /// XM_005271018 /// XM_005271019 /// XM_005271020 /// XM_005271021 /// XM_005271022 /// XM_005271023 /// XM_006710758 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051447 // negative regulation of meiotic cell cycle // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0097338 // response to clozapine // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005952 // cAMP-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay </td> <td> 250.23 </td> <td> 494.99 </td> <td> 6.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218132_s_at </td> <td> 218132_s_at </td> <td> NM_024075 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024075.1 /DEF=Homo sapiens LENG5 protein (LENG5), mRNA. /FEA=mRNA /GEN=LENG5 /PROD=LENG5 protein /DB_XREF=gi:13129061 /UG=Hs.15580 LENG5 protein /FL=gb:BC000944.2 gb:NM_024075.1 </td> <td> NM_024075 </td> <td> TSEN34 tRNA splicing endonuclease subunit </td> <td> TSEN34 </td> <td> 79042 </td> <td> NM_001077446 /// NM_001282332 /// NM_001282333 /// NM_024075 /// XM_005259241 /// XM_005277087 /// XM_005277276 /// XM_005277318 /// XM_005278290 /// XM_006725878 /// XM_006725966 /// XM_006726065 /// XM_006726166 /// XM_006726203 </td> <td> 0000379 // tRNA-type intron splice site recognition and cleavage // inferred from electronic annotation /// 0006388 // tRNA splicing, via endonucleolytic cleavage and ligation // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090501 // RNA phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation </td> <td> 0000214 // tRNA-intron endonuclease complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation </td> <td> 0000213 // tRNA-intron endonuclease activity // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation </td> <td> 86.42 </td> <td> 192.31 </td> <td> 6.10 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 221799_at </td> <td> 221799_at </td> <td> AB037823 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB037823.1 /DEF=Homo sapiens mRNA for KIAA1402 protein, partial cds. /FEA=mRNA /GEN=KIAA1402 /PROD=KIAA1402 protein /DB_XREF=gi:7243184 /UG=Hs.86392 KIAA1402  protein </td> <td> AB037823 </td> <td> chondroitin polymerizing factor 2 </td> <td> CHPF2 </td> <td> 54480 </td> <td> NM_001284295 /// NM_019015 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation </td> <td> 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0050510 // N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity // inferred from electronic annotation </td> <td> 72.38 </td> <td> 56.59 </td> <td> 6.09 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 222155_s_at </td> <td> 222155_s_at </td> <td> AK021918 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK021918.1 /DEF=Homo sapiens cDNA FLJ11856 fis, clone HEMBA1006789. /FEA=mRNA /DB_XREF=gi:10433214 /UG=Hs.6459 hypothetical protein FLJ11856 </td> <td> AK021918 </td> <td> solute carrier family 52 (riboflavin transporter), member 2 </td> <td> SLC52A2 </td> <td> 79581 </td> <td> NM_001253815 /// NM_001253816 /// NM_024531 /// NR_045600 /// XM_006716658 /// XM_006716659 /// XM_006716660 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0032218 // riboflavin transport // inferred from direct assay </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0032217 // riboflavin transporter activity // inferred from direct assay </td> <td> 98.75 </td> <td> 79.53 </td> <td> 6.09 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 214276_at </td> <td> 214276_at </td> <td> N49268 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N49268 /FEA=EST /DB_XREF=gi:1190434 /DB_XREF=est:yy85e11.s1 /CLONE=IMAGE:280364 /UG=Hs.23510 Kruppel-like factor 12 </td> <td> N49268 </td> <td> Kruppel-like factor 12 </td> <td> KLF12 </td> <td> 11278 </td> <td> NM_007249 /// NM_016285 /// XM_005266251 /// XM_005266252 /// XM_006719762 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0001227 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -60.45 </td> <td> 82.08 </td> <td> -6.09 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208407_s_at </td> <td> 208407_s_at </td> <td> NM_001331 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001331.1 /DEF=Homo sapiens catenin (cadherin-associated protein), delta 1 (CTNND1), mRNA.  /FEA=mRNA /GEN=CTNND1 /PROD=catenin (cadherin-associated protein), delta 1 /DB_XREF=gi:10835009 /UG=Hs.166011 catenin (cadherin-associated protein), delta 1 /FL=gb:NM_001331.1 gb:AF062317.1 </td> <td> NM_001331 </td> <td> catenin (cadherin-associated protein), delta 1 /// TMX2-CTNND1 readthrough (NMD candidate) </td> <td> CTNND1 /// TMX2-CTNND1 </td> <td> 1500 /// 100528016 </td> <td> NM_001085458 /// NM_001085459 /// NM_001085460 /// NM_001085461 /// NM_001085462 /// NM_001085463 /// NM_001085464 /// NM_001085465 /// NM_001085466 /// NM_001085467 /// NM_001085468 /// NM_001085469 /// NM_001206883 /// NM_001206884 /// NM_001206885 /// NM_001206886 /// NM_001206887 /// NM_001206888 /// NM_001206889 /// NM_001206890 /// NM_001206891 /// NM_001331 /// NR_037646 </td> <td> 0001738 // morphogenesis of a polarized epithelium // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0060690 // epithelial cell differentiation involved in salivary gland development // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // inferred from physical interaction /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation </td> <td> 100.30 </td> <td> 139.07 </td> <td> 6.09 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208669_s_at </td> <td> 208669_s_at </td> <td> AF109873 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF109873.1 /DEF=Homo sapiens retinoblastoma protein-associated protein mRNA, complete cds.  /FEA=mRNA /PROD=retinoblastoma protein-associated protein /DB_XREF=gi:11415000 /UG=Hs.75847 CREBBPEP300 inhibitory protein 1 /FL=gb:AF109873.1 gb:AF274947.1 gb:AF274951.1 gb:AF092135.1 gb:NM_014335.1 </td> <td> AF109873 </td> <td> EP300 interacting inhibitor of differentiation 1 </td> <td> EID1 </td> <td> 23741 </td> <td> NM_014335 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from direct assay /// 0035065 // regulation of histone acetylation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from physical interaction /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0035034 // histone acetyltransferase regulator activity // inferred from direct assay /// 0035035 // histone acetyltransferase binding // inferred from direct assay </td> <td> 226.65 </td> <td> 358.35 </td> <td> 6.09 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202260_s_at </td> <td> 202260_s_at </td> <td> NM_003165 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003165.1 /DEF=Homo sapiens syntaxin binding protein 1 (STXBP1), mRNA. /FEA=mRNA /GEN=STXBP1 /PROD=syntaxin binding protein 1 /DB_XREF=gi:4507296 /UG=Hs.239356 syntaxin binding protein 1 /FL=gb:AF004563.1 gb:NM_003165.1 </td> <td> NM_003165 </td> <td> syntaxin binding protein 1 </td> <td> STXBP1 </td> <td> 6812 </td> <td> NM_001032221 /// NM_003165 </td> <td> 0002576 // platelet degranulation // inferred from mutant phenotype /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0007412 // axon target recognition // inferred from sequence or structural similarity /// 0010807 // regulation of synaptic vesicle priming // inferred from sequence or structural similarity /// 0014047 // glutamate secretion // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016188 // synaptic vesicle maturation // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032229 // negative regulation of synaptic transmission, GABAergic // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045921 // positive regulation of exocytosis // inferred from electronic annotation /// 0045956 // positive regulation of calcium ion-dependent exocytosis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050821 // protein stabilization // inferred from electronic annotation /// 0060292 // long term synaptic depression // inferred from electronic annotation /// 0070527 // platelet aggregation // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0031091 // platelet alpha granule // inferred from direct assay /// 0043234 // protein complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000149 // SNARE binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from electronic annotation /// 0017075 // syntaxin-1 binding // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from electronic annotation </td> <td> 55.52 </td> <td> 119.61 </td> <td> 6.08 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 221016_s_at </td> <td> 221016_s_at </td> <td> NM_031283 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031283.1 /DEF=Homo sapiens HMG-box transcription factor TCF-3 (TCF-3), mRNA. /FEA=mRNA /GEN=TCF-3 /PROD=HMG-box transcription factor TCF-3 /DB_XREF=gi:13786122 /FL=gb:NM_031283.1 </td> <td> NM_031283 </td> <td> transcription factor 7-like 1 (T-cell specific, HMG-box) </td> <td> TCF7L1 </td> <td> 83439 </td> <td> NM_031283 /// XM_006712109 /// XM_006712110 </td> <td> 0006325 // chromatin organization // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0007420 // brain development // not recorded /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030111 // regulation of Wnt signaling pathway // non-traceable author statement /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0046022 // positive regulation of transcription from RNA polymerase II promoter during mitosis // inferred from electronic annotation /// 0048319 // axial mesoderm morphogenesis // inferred from electronic annotation /// 0048699 // generation of neurons // not recorded /// 0048863 // stem cell differentiation // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway // not recorded /// 2000036 // regulation of stem cell maintenance // inferred from electronic annotation </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005667 // transcription factor complex // not recorded </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0003682 // chromatin binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // not recorded /// 0043565 // sequence-specific DNA binding // not recorded /// 0044212 // transcription regulatory region DNA binding // not recorded </td> <td> -58.38 </td> <td> 159.24 </td> <td> -6.08 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 203343_at </td> <td> 203343_at </td> <td> NM_003359 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003359.1 /DEF=Homo sapiens UDP-glucose dehydrogenase (UGDH), mRNA. /FEA=mRNA /GEN=UGDH /PROD=UDP-glucose dehydrogenase /DB_XREF=gi:4507812 /UG=Hs.28309 UDP-glucose dehydrogenase /FL=gb:AF061016.1 gb:NM_003359.1 </td> <td> NM_003359 </td> <td> UDP-glucose 6-dehydrogenase </td> <td> UGDH </td> <td> 7358 </td> <td> NM_001184700 /// NM_001184701 /// NM_003359 /// XM_005262667 /// XM_006714029 </td> <td> 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0006011 // UDP-glucose metabolic process // traceable author statement /// 0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006065 // UDP-glucuronate biosynthetic process // inferred from electronic annotation /// 0006065 // UDP-glucuronate biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0052695 // cellular glucuronidation // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0003979 // UDP-glucose 6-dehydrogenase activity // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 127.30 </td> <td> 208.72 </td> <td> 6.07 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 204178_s_at </td> <td> 204178_s_at </td> <td> NM_006328 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006328.1 /DEF=Homo sapiens RNA binding motif protein 14 (RBM14), mRNA. /FEA=mRNA /GEN=RBM14 /PROD=RNA binding motif protein 14 /DB_XREF=gi:5454063 /UG=Hs.11170 RNA binding motif protein 14 /FL=gb:AF080561.1 gb:NM_006328.1 </td> <td> NM_006328 </td> <td> RNA binding motif protein 14 </td> <td> RBM14 </td> <td> 10432 </td> <td> NM_001198836 /// NM_001198837 /// NM_006328 /// NM_032886 </td> <td> 0006260 // DNA replication // non-traceable author statement /// 0006281 // DNA repair // non-traceable author statement /// 0006310 // DNA recombination // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // non-traceable author statement /// 0009725 // response to hormone // traceable author statement /// 0016575 // histone deacetylation // inferred from physical interaction /// 0030520 // intracellular estrogen receptor signaling pathway // non-traceable author statement /// 0042921 // glucocorticoid receptor signaling pathway // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from physical interaction /// 0005730 // nucleolus // inferred from direct assay /// 0016592 // mediator complex // non-traceable author statement /// 0030529 // ribonucleoprotein complex // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001104 // RNA polymerase II transcription cofactor activity // non-traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from physical interaction /// 0030674 // protein binding, bridging // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 129.65 </td> <td> 105.58 </td> <td> 6.07 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201241_at </td> <td> 201241_at </td> <td> NM_004939 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004939.1 /DEF=Homo sapiens DEADH (Asp-Glu-Ala-AspHis) box polypeptide 1 (DDX1), mRNA.  /FEA=mRNA /GEN=DDX1 /PROD=DEADH (Asp-Glu-Ala-AspHis) box polypeptide 1 /DB_XREF=gi:4826685 /UG=Hs.78580 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 1 /FL=gb:X70649.1 gb:NM_004939.1 </td> <td> NM_004939 </td> <td> DEAD (Asp-Glu-Ala-Asp) box helicase 1 </td> <td> DDX1 </td> <td> 1653 </td> <td> NM_004939 </td> <td> 0000245 // spliceosomal complex assembly // non-traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006302 // double-strand break repair // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006446 // regulation of translational initiation // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from expression pattern /// 0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0071920 // cleavage body // inferred from direct assay /// 0072669 // tRNA-splicing ligase complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from direct assay /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from direct assay /// 0008143 // poly(A) binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0033677 // DNA/RNA helicase activity // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 155.90 </td> <td> 497.62 </td> <td> 6.07 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202693_s_at </td> <td> 202693_s_at </td> <td> AW194730 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW194730 /FEA=EST /DB_XREF=gi:6473630 /DB_XREF=est:xn43d11.x1 /CLONE=IMAGE:2696469 /UG=Hs.9075 serinethreonine kinase 17a (apoptosis-inducing) /FL=gb:AB011420.1 gb:NM_004760.1 </td> <td> AW194730 </td> <td> serine/threonine kinase 17a </td> <td> STK17A </td> <td> 9263 </td> <td> NM_004760 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 2000271 // positive regulation of fibroblast apoptotic process // inferred from mutant phenotype /// 2000377 // regulation of reactive oxygen species metabolic process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 103.42 </td> <td> 215.44 </td> <td> 6.06 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202558_s_at </td> <td> 202558_s_at </td> <td> NM_006948 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006948.1 /DEF=Homo sapiens stress 70 protein chaperone, microsome-associated, 60kD (STCH), mRNA.  /FEA=mRNA /GEN=STCH /PROD=stress 70 protein chaperone,microsome-associated, 60kD /DB_XREF=gi:5902125 /UG=Hs.288799 stress 70 protein chaperone, microsome-associated, 60kD /FL=gb:U04735.1 gb:NM_006948.1 </td> <td> NM_006948 </td> <td> heat shock protein 70kDa family, member 13 </td> <td> HSPA13 </td> <td> 6782 </td> <td> NM_006948 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> -117.00 </td> <td> 135.50 </td> <td> -6.06 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209482_at </td> <td> 209482_at </td> <td> BC001430 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001430.1 /DEF=Homo sapiens, POP7 (processing of precursor, S. cerevisiae) homolog, clone MGC:1986, mRNA, complete cds.  /FEA=mRNA /PROD=POP7 (processing of precursor, S. cerevisiae)homolog /DB_XREF=gi:12655150 /UG=Hs.18747 POP7 (processing of precursor, S. cerevisiae) homolog /FL=gb:BC001430.1 gb:U94316.1 gb:NM_005837.1 </td> <td> BC001430 </td> <td> processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae) </td> <td> POP7 </td> <td> 10248 </td> <td> NM_005837 </td> <td> 0008033 // tRNA processing // inferred from electronic annotation /// 0090501 // RNA phosphodiester bond hydrolysis // traceable author statement /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005655 // nucleolar ribonuclease P complex // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004526 // ribonuclease P activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 59.05 </td> <td> 115.75 </td> <td> 6.05 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212788_x_at </td> <td> 212788_x_at </td> <td> BG537190 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG537190 /FEA=EST /DB_XREF=gi:13528922 /DB_XREF=est:602565589F1 /CLONE=IMAGE:4690079 /UG=Hs.111334 ferritin, light polypeptide </td> <td> BG537190 </td> <td> ferritin, light polypeptide </td> <td> FTL </td> <td> 2512 </td> <td> NM_000146 </td> <td> 0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0055072 // iron ion homeostasis // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0008043 // intracellular ferritin complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005506 // iron ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation </td> <td> -690.55 </td> <td> 3487.57 </td> <td> -6.05 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209090_s_at </td> <td> 209090_s_at </td> <td> AL049597 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049597 /DEF=Human DNA sequence from clone RP4-612B15 on chromosome 1p22.2-31.1. Contains the (possibly pseudo) gene for a novel protein similar to 60S ribosomal protein L17 (RPL17), the gene for CGI-61, endophilin B1 and KIAA0491, ESTs, STSs, GSSs and two CpG... /FEA=mRNA_3 /DB_XREF=gi:9663352 /UG=Hs.136309 SH3-containing protein SH3GLB1 /FL=gb:AF263293.1 </td> <td> AL049597 </td> <td> SH3-domain GRB2-like endophilin B1 </td> <td> SH3GLB1 </td> <td> 51100 </td> <td> NM_001206651 /// NM_001206652 /// NM_001206653 /// NM_016009 /// XM_006710672 /// XM_006710673 </td> <td> 0006654 // phosphatidic acid biosynthetic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0051084 // 'de novo' posttranslational protein folding // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from direct assay /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005504 // fatty acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0042171 // lysophosphatidic acid acyltransferase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> 255.03 </td> <td> 376.86 </td> <td> 6.05 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212453_at </td> <td> 212453_at </td> <td> AB033105 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB033105.1 /DEF=Homo sapiens mRNA for KIAA1279 protein, partial cds. /FEA=mRNA /GEN=KIAA1279 /PROD=KIAA1279 protein /DB_XREF=gi:6331321 /UG=Hs.172854 DKFZP586B0923 protein </td> <td> AB033105 </td> <td> KIAA1279 </td> <td> KIAA1279 </td> <td> 26128 </td> <td> NM_015634 </td> <td> 0006839 // mitochondrial transport // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from physical interaction </td> <td> 68.55 </td> <td> 177.55 </td> <td> 6.05 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209905_at </td> <td> 209905_at </td> <td> AI246769 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI246769 /FEA=EST /DB_XREF=gi:3842166 /DB_XREF=est:qk40f08.x1 /CLONE=IMAGE:1871463 /UG=Hs.127428 homeo box A9 /FL=gb:U82759.1 </td> <td> AI246769 </td> <td> HOXA10-HOXA9 readthrough /// homeobox A9 /// microRNA 196b </td> <td> HOXA10-HOXA9 /// HOXA9 /// MIR196B </td> <td> 3205 /// 442920 /// 100534589 </td> <td> NM_152739 /// NR_029911 /// NR_037940 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042118 // endothelial cell activation // inferred from mutant phenotype /// 0045638 // negative regulation of myeloid cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0060216 // definitive hemopoiesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 74.35 </td> <td> 80.28 </td> <td> 6.04 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 217716_s_at </td> <td> 217716_s_at </td> <td> NM_013336 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013336.1 /DEF=Homo sapiens sec61 homolog (HSEC61), mRNA. /FEA=mRNA /GEN=HSEC61 /PROD=sec61 homolog /DB_XREF=gi:7019414 /UG=Hs.306079 sec61 homolog /FL=gb:BC002951.1 gb:AF346602.1 gb:AF084458.1 gb:NM_013336.1 </td> <td> NM_013336 </td> <td> Sec61 alpha 1 subunit (S. cerevisiae) </td> <td> SEC61A1 </td> <td> 29927 </td> <td> NM_013336 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // inferred from mutant phenotype /// 0006620 // posttranslational protein targeting to membrane // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007029 // endoplasmic reticulum organization // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016049 // cell growth // inferred from mutant phenotype /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045047 // protein targeting to ER // inferred from sequence or structural similarity /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from sequence or structural similarity </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from sequence or structural similarity </td> <td> 166.32 </td> <td> 378.59 </td> <td> 6.04 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 214211_at </td> <td> 214211_at </td> <td> AA083483 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA083483 /FEA=EST /DB_XREF=gi:1625544 /DB_XREF=est:zn32a06.s1 /CLONE=IMAGE:549106 /UG=Hs.62954 ferritin, heavy polypeptide 1 </td> <td> AA083483 </td> <td> ferritin, heavy polypeptide 1 </td> <td> FTH1 </td> <td> 2495 </td> <td> NM_002032 </td> <td> 0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006880 // intracellular sequestering of iron ion // inferred from direct assay /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006955 // immune response // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0048147 // negative regulation of fibroblast proliferation // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0008043 // intracellular ferritin complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004322 // ferroxidase activity // inferred from electronic annotation /// 0005506 // iron ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation </td> <td> -102.35 </td> <td> 200.82 </td> <td> -6.04 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208944_at </td> <td> 208944_at </td> <td> D50683 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D50683.1 /DEF=Homo sapiens mRNA for TGF-betaIIR alpha, complete cds. /FEA=mRNA /PROD=TGF-betaIIR alpha /DB_XREF=gi:1827474 /UG=Hs.82028 transforming growth factor, beta receptor II (70-80kD) /FL=gb:D50683.1 </td> <td> D50683 </td> <td> transforming growth factor, beta receptor II (70/80kDa) </td> <td> TGFBR2 </td> <td> 7048 </td> <td> NM_001024847 /// NM_003242 /// XM_006713316 </td> <td> 0001568 // blood vessel development // traceable author statement /// 0001569 // patterning of blood vessels // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0002088 // lens development in camera-type eye // inferred from electronic annotation /// 0002651 // positive regulation of tolerance induction to self antigen // inferred from sequence or structural similarity /// 0002663 // positive regulation of B cell tolerance induction // inferred from sequence or structural similarity /// 0002666 // positive regulation of T cell tolerance induction // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred by curator /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007182 // common-partner SMAD protein phosphorylation // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010634 // positive regulation of epithelial cell migration // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from sequence or structural similarity /// 0032924 // activin receptor signaling pathway // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from sequence or structural similarity /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from sequence or structural similarity /// 0042493 // response to drug // inferred from direct assay /// 0043011 // myeloid dendritic cell differentiation // inferred from sequence or structural similarity /// 0043415 // positive regulation of skeletal muscle tissue regeneration // inferred from electronic annotation /// 0043627 // response to estrogen // inferred from electronic annotation /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from sequence or structural similarity /// 0051138 // positive regulation of NK T cell differentiation // inferred from sequence or structural similarity /// 0051216 // cartilage development // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060425 // lung morphogenesis // inferred from electronic annotation /// 0060433 // bronchus development // inferred from electronic annotation /// 0060434 // bronchus morphogenesis // inferred from electronic annotation /// 0060439 // trachea morphogenesis // inferred from electronic annotation /// 0060440 // trachea formation // inferred from electronic annotation /// 0060443 // mammary gland morphogenesis // inferred from electronic annotation /// 0060463 // lung lobe morphogenesis // inferred from electronic annotation /// 0070723 // response to cholesterol // inferred from direct assay /// 1990086 // lens fiber cell apoptotic process // inferred from electronic annotation /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0070022 // transforming growth factor beta receptor homodimeric complex // inferred by curator </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred by curator /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from direct assay /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from mutant phenotype /// 0005026 // transforming growth factor beta receptor activity, type II // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017002 // activin-activated receptor activity // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation /// 0034713 // type I transforming growth factor beta receptor binding // inferred from direct assay /// 0034713 // type I transforming growth factor beta receptor binding // inferred from physical interaction /// 0034714 // type III transforming growth factor beta receptor binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050431 // transforming growth factor beta binding // inferred from direct assay /// 0050431 // transforming growth factor beta binding // inferred from physical interaction </td> <td> -383.70 </td> <td> 1465.25 </td> <td> -6.03 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202963_at </td> <td> 202963_at </td> <td> AW027312 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW027312 /FEA=EST /DB_XREF=gi:5886068 /DB_XREF=est:wt73b04.x1 /CLONE=IMAGE:2513071 /UG=Hs.166891 regulatory factor X, 5 (influences HLA class II expression) /FL=gb:NM_000449.1 </td> <td> AW027312 </td> <td> regulatory factor X, 5 (influences HLA class II expression) </td> <td> RFX5 </td> <td> 5993 </td> <td> NM_000449 /// NM_001025603 /// XM_005245405 /// XM_005245406 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 76.88 </td> <td> 88.11 </td> <td> 6.03 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213077_at </td> <td> 213077_at </td> <td> AL049305 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049305.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564A186 (from clone DKFZp564A186). /FEA=mRNA /DB_XREF=gi:4500074 /UG=Hs.104916 hypothetical protein FLJ21940 </td> <td> AL049305 </td> <td> YTH domain containing 2 </td> <td> YTHDC2 </td> <td> 64848 </td> <td> NM_022828 /// XM_005272052 /// XR_246540 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0034612 // response to tumor necrosis factor // inferred from direct assay /// 0044829 // positive regulation by host of viral genome replication // inferred from mutant phenotype /// 0070555 // response to interleukin-1 // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008186 // RNA-dependent ATPase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070063 // RNA polymerase binding // inferred from physical interaction </td> <td> 61.38 </td> <td> 98.14 </td> <td> 6.02 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212382_at </td> <td> 212382_at </td> <td> BF433429 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF433429 /FEA=EST /DB_XREF=gi:11445592 /DB_XREF=est:7q53a12.x1 /CLONE=IMAGE:3702046 /UG=Hs.289068 Homo sapiens cDNA FLJ11918 fis, clone HEMBB1000272 </td> <td> BF433429 </td> <td> transcription factor 4 </td> <td> TCF4 </td> <td> 6925 </td> <td> NM_001083962 /// NM_001243226 /// NM_001243227 /// NM_001243228 /// NM_001243230 /// NM_001243231 /// NM_001243232 /// NM_001243233 /// NM_001243234 /// NM_001243235 /// NM_001243236 /// NM_003199 /// XM_005266739 /// XM_005266741 /// XM_005266743 /// XM_005266744 /// XM_005266745 /// XM_005266746 /// XM_005266747 /// XM_005266749 /// XM_005266750 /// XM_005266752 /// XM_005266754 /// XM_005266755 /// XM_005266761 /// XM_006722529 /// XM_006722530 /// XM_006722531 /// XM_006722532 /// XM_006722533 /// XM_006722534 /// XM_006722535 /// XM_006722536 /// XM_006722537 /// XM_006722538 /// XM_006722539 /// XM_006722540 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006352 // DNA-templated transcription, initiation // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from sequence or structural similarity </td> <td> -193.25 </td> <td> 480.65 </td> <td> -6.01 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202107_s_at </td> <td> 202107_s_at </td> <td> NM_004526 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004526.1 /DEF=Homo sapiens minichromosome maintenance deficient (S. cerevisiae) 2 (mitotin) (MCM2), mRNA.  /FEA=mRNA /GEN=MCM2 /PROD=minichromosome maintenance deficient (S.cerevisiae) 2 (mitotin) /DB_XREF=gi:4758705 /UG=Hs.57101 minichromosome maintenance deficient (S. cerevisiae) 2 (mitotin) /FL=gb:D83987.1 gb:NM_004526.1 </td> <td> NM_004526 </td> <td> minichromosome maintenance complex component 2 </td> <td> MCM2 </td> <td> 4171 </td> <td> NM_004526 /// NR_073375 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006268 // DNA unwinding involved in DNA replication // inferred from electronic annotation /// 0006270 // DNA replication initiation // inferred from mutant phenotype /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0007049 // cell cycle // traceable author statement /// 0015979 // photosynthesis // inferred from electronic annotation /// 0015995 // chlorophyll biosynthetic process // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005664 // nuclear origin of replication recognition complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0042555 // MCM complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003688 // DNA replication origin binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016851 // magnesium chelatase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0042393 // histone binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 136.57 </td> <td> 172.16 </td> <td> 6.01 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213187_x_at </td> <td> 213187_x_at </td> <td> BG538564 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG538564 /FEA=EST /DB_XREF=gi:13530797 /DB_XREF=est:602567289F1 /CLONE=IMAGE:4691639 /UG=Hs.324746 alpha-2-HS-glycoprotein </td> <td> BG538564 </td> <td> ferritin, light polypeptide </td> <td> FTL </td> <td> 2512 </td> <td> NM_000146 </td> <td> 0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0055072 // iron ion homeostasis // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0008043 // intracellular ferritin complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation </td> <td> -765.80 </td> <td> 2220.10 </td> <td> -6.01 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212791_at </td> <td> 212791_at </td> <td> AL042729 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL042729 /FEA=EST /DB_XREF=gi:5935545 /DB_XREF=est:DKFZp434B0222_s1 /CLONE=DKFZp434B0222 /UG=Hs.112023 ESTs </td> <td> AL042729 </td> <td> chromosome 1 open reading frame 216 </td> <td> C1orf216 </td> <td> 127703 </td> <td> NM_152374 </td> <td>  </td> <td>  </td> <td>  </td> <td> 49.05 </td> <td> 75.33 </td> <td> 6.00 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201270_x_at </td> <td> 201270_x_at </td> <td> NM_015332 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015332.1 /DEF=Homo sapiens KIAA1068 protein (KIAA1068), mRNA. /FEA=mRNA /GEN=KIAA1068 /PROD=KIAA1068 protein /DB_XREF=gi:13357209 /UG=Hs.4770 KIAA1068 protein /FL=gb:BC003691.1 gb:NM_015332.1 </td> <td> NM_015332 </td> <td> NudC domain containing 3 </td> <td> NUDCD3 </td> <td> 23386 </td> <td> NM_015332 </td> <td>  </td> <td>  </td> <td>  </td> <td> 71.10 </td> <td> 234.67 </td> <td> 6.00 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209020_at </td> <td> 209020_at </td> <td> AF217514 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF217514.1 /DEF=Homo sapiens uncharacterized bone marrow protein BM038 mRNA, complete cds.  /FEA=mRNA /PROD=uncharacterized bone marrow protein BM038 /DB_XREF=gi:7688970 /UG=Hs.75798 hypothetical protein /FL=gb:AF161517.1 gb:AF151041.1 gb:AF217514.1 gb:NM_016470.1 </td> <td> AF217514 </td> <td> oxidative stress responsive serine-rich 1 </td> <td> OSER1 </td> <td> 51526 </td> <td> NM_016470 /// XM_005260424 /// XM_005260425 /// XM_006723803 </td> <td> 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation </td> <td>  </td> <td>  </td> <td> -80.90 </td> <td> 144.97 </td> <td> -6.00 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 65591_at </td> <td> 65591_at </td> <td> N64681 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. N64681:yz87g05.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-290072 /clone_end=3' /gb=N64681 /gi=1212510 /ug=Hs.239120 /len=606 </td> <td> N64681 </td> <td> WD repeat domain 48 </td> <td> WDR48 </td> <td> 57599 </td> <td> NM_020839 /// XM_005265346 </td> <td> 0016032 // viral process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -66.52 </td> <td> 168.74 </td> <td> -6.00 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201333_s_at </td> <td> 201333_s_at </td> <td> AI807672 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI807672 /FEA=EST /DB_XREF=gi:5394238 /DB_XREF=est:wf49f10.x1 /CLONE=IMAGE:2358955 /UG=Hs.6582 Rho guanine exchange factor (GEF) 12 /FL=gb:AF180681.1 gb:NM_015313.1 </td> <td> AI807672 </td> <td> Rho guanine nucleotide exchange factor (GEF) 12 </td> <td> ARHGEF12 </td> <td> 23365 </td> <td> NM_001198665 /// NM_015313 /// XM_005271478 /// XM_005271480 /// XM_006718805 </td> <td> 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001664 // G-protein coupled receptor binding // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> -60.10 </td> <td> 86.00 </td> <td> -5.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201221_s_at </td> <td> 201221_s_at </td> <td> NM_003089 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003089.1 /DEF=Homo sapiens small nuclear ribonucleoprotein 70kD polypeptide (RNP antigen) (SNRP70), mRNA.  /FEA=mRNA /GEN=SNRP70 /PROD=small nuclear ribonucleoprotein 70kD polypeptide(RNP antigen) /DB_XREF=gi:4507118 /UG=Hs.174051 small nuclear ribonucleoprotein 70kD polypeptide (RNP antigen) /FL=gb:BC000342.1 gb:M22636.1 gb:NM_003089.1 </td> <td> NM_003089 </td> <td> small nuclear ribonucleoprotein 70kDa (U1) </td> <td> SNRNP70 </td> <td> 6625 </td> <td> NM_001009820 /// NM_003089 /// XM_005259177 /// XM_005259178 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0032479 // regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032608 // interferon-beta production // inferred from electronic annotation /// 0032608 // interferon-beta production // inferred from sequence or structural similarity /// 0034340 // response to type I interferon // inferred from electronic annotation /// 0034340 // response to type I interferon // inferred from sequence or structural similarity /// 0043484 // regulation of RNA splicing // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0051607 // defense response to virus // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from sequence or structural similarity /// 0070534 // protein K63-linked ubiquitination // inferred from electronic annotation /// 0070534 // protein K63-linked ubiquitination // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005685 // U1 snRNP // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from mutant phenotype /// 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from sequence or structural similarity /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 204.55 </td> <td> 326.57 </td> <td> 5.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 203234_at </td> <td> 203234_at </td> <td> NM_003364 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003364.1 /DEF=Homo sapiens uridine phosphorylase (UP), mRNA. /FEA=mRNA /GEN=UP /PROD=uridine phosphorylase /DB_XREF=gi:4507838 /UG=Hs.77573 uridine phosphorylase /FL=gb:BC001405.1 gb:NM_003364.1 </td> <td> NM_003364 </td> <td> uridine phosphorylase 1 </td> <td> UPP1 </td> <td> 7378 </td> <td> NM_001287426 /// NM_001287428 /// NM_001287429 /// NM_001287430 /// NM_003364 /// NM_181597 /// NR_109837 /// XM_005249838 /// XM_006715771 </td> <td> 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006206 // pyrimidine nucleobase metabolic process // traceable author statement /// 0006220 // pyrimidine nucleotide metabolic process // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0009166 // nucleotide catabolic process // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0043097 // pyrimidine nucleoside salvage // traceable author statement /// 0044206 // UMP salvage // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046108 // uridine metabolic process // inferred from electronic annotation /// 0046135 // pyrimidine nucleoside catabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004850 // uridine phosphorylase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016763 // transferase activity, transferring pentosyl groups // inferred from electronic annotation </td> <td> -76.97 </td> <td> 110.29 </td> <td> -5.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 203119_at </td> <td> 203119_at </td> <td> NM_024098 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024098.1 /DEF=Homo sapiens hypothetical protein MGC2574 (MGC2574), mRNA. /FEA=mRNA /GEN=MGC2574 /PROD=hypothetical protein MGC2574 /DB_XREF=gi:13129103 /UG=Hs.4253 hypothetical protein MGC2574 /FL=gb:BC001378.1 gb:NM_024098.1 </td> <td> NM_024098 </td> <td> coiled-coil domain containing 86 </td> <td> CCDC86 </td> <td> 79080 </td> <td> NM_024098 </td> <td> 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 98.50 </td> <td> 261.45 </td> <td> 5.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213803_at </td> <td> 213803_at </td> <td> BG545463 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG545463 /FEA=EST /DB_XREF=gi:13544128 /DB_XREF=est:602572695F1 /CLONE=IMAGE:4701118 /UG=Hs.180446 karyopherin (importin) beta 1 </td> <td> BG545463 </td> <td> karyopherin (importin) beta 1 </td> <td> KPNB1 </td> <td> 3837 </td> <td> NM_001276453 /// NM_002265 </td> <td> 0000060 // protein import into nucleus, translocation // traceable author statement /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006610 // ribosomal protein import into nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071782 // endoplasmic reticulum tubular network // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008270 // zinc ion binding // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 104.10 </td> <td> 169.82 </td> <td> 5.99 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201845_s_at </td> <td> 201845_s_at </td> <td> AB029551 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB029551.1 /DEF=Homo sapiens YEAF1 mRNA for YY1 and E4TF1 associated factor 1, complete cds.  /FEA=mRNA /GEN=YEAF1 /PROD=YY1 and E4TF1 associated factor 1 /DB_XREF=gi:6714542 /UG=Hs.7910 RING1 and YY1 binding protein /FL=gb:AF179286.1 gb:AB029551.1 gb:NM_012234.1 </td> <td> AB029551 </td> <td> RING1 and YY1 binding protein </td> <td> RYBP </td> <td> 23429 </td> <td> NM_012234 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0035518 // histone H2A monoubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -79.80 </td> <td> 127.90 </td> <td> -5.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209682_at </td> <td> 209682_at </td> <td> U26710 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U26710.1 /DEF=Human cbl-b mRNA, complete cds. /FEA=mRNA /PROD=cbl-b /DB_XREF=gi:862406 /UG=Hs.3144 Cas-Br-M (murine) ectropic retroviral transforming sequence b /FL=gb:U26710.1 </td> <td> U26710 </td> <td> Cbl proto-oncogene B, E3 ubiquitin protein ligase </td> <td> CBLB </td> <td> 868 </td> <td> NM_170662 /// XM_005247852 /// XM_005247853 /// XM_006713796 /// XM_006713797 /// XR_427384 /// XR_427385 </td> <td> 0002669 // positive regulation of T cell anergy // inferred from electronic annotation /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0023051 // regulation of signaling // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042110 // T cell activation // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0046642 // negative regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement </td> <td> 0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -65.28 </td> <td> 111.66 </td> <td> -5.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213294_at </td> <td> 213294_at </td> <td> AV755522 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV755522 /FEA=EST /DB_XREF=gi:10913370 /DB_XREF=est:AV755522 /CLONE=BMFAWG03 /UG=Hs.306117 Homo sapiens clone FLC0675 PRO2870 mRNA, complete cds </td> <td> AV755522 </td> <td> eukaryotic translation initiation factor 2-alpha kinase 2 </td> <td> EIF2AK2 </td> <td> 5610 </td> <td> NM_001135651 /// NM_001135652 /// NM_002759 </td> <td> 0000186 // activation of MAPKK activity // inferred from mutant phenotype /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0002376 // immune system process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009615 // response to virus // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // traceable author statement /// 0019054 // modulation by virus of host process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0030683 // evasion or tolerance by virus of host immune response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0032722 // positive regulation of chemokine production // inferred from sequence or structural similarity /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from sequence or structural similarity /// 0033689 // negative regulation of osteoblast proliferation // inferred from mutant phenotype /// 0035455 // response to interferon-alpha // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 1900225 // regulation of NLRP3 inflammasome complex assembly // inferred from sequence or structural similarity /// 1901224 // positive regulation of NIK/NF-kappaB signaling // inferred from sequence or structural similarity /// 1901532 // regulation of hematopoietic progenitor cell differentiation // inferred from sequence or structural similarity /// 1902033 // regulation of hematopoietic stem cell proliferation // inferred from sequence or structural similarity /// 1902036 // regulation of hematopoietic stem cell differentiation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from mutant phenotype /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 81.62 </td> <td> 108.99 </td> <td> 5.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 204017_at </td> <td> 204017_at </td> <td> NM_006855 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006855.2 /DEF=Homo sapiens KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 (KDELR3), transcript variant 1, mRNA.  /FEA=mRNA /GEN=KDELR3 /PROD=KDEL  receptor 3, isoform a /DB_XREF=gi:8051612 /UG=Hs.250696 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 /FL=gb:BC001277.1 gb:NM_006855.2 </td> <td> NM_006855 </td> <td> KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 </td> <td> KDELR3 </td> <td> 11015 </td> <td> NM_006855 /// NM_016657 </td> <td> 0006621 // protein retention in ER lumen // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0046923 // ER retention sequence binding // inferred from electronic annotation </td> <td> 76.02 </td> <td> 152.31 </td> <td> 5.98 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212738_at </td> <td> 212738_at </td> <td> AV717623 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV717623 /FEA=EST /DB_XREF=gi:10814775 /DB_XREF=est:AV717623 /CLONE=DCBBIC10 /UG=Hs.80305 Human clone 23719 mRNA sequence </td> <td> AV717623 </td> <td> Rho GTPase activating protein 19 </td> <td> ARHGAP19 </td> <td> 84986 </td> <td> NM_001204300 /// NM_001256423 /// NM_032900 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation </td> <td> 49.48 </td> <td> 31.79 </td> <td> 5.97 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208735_s_at </td> <td> 208735_s_at </td> <td> AF022231 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF022231.1 /DEF=Homo sapiens unknown protein mRNA, complete cds. /FEA=mRNA /PROD=unknown protein /DB_XREF=gi:4103319 /UG=Hs.180669 conserved gene amplified in osteosarcoma /FL=gb:AF000152.1 gb:AF022231.1 </td> <td> AF022231 </td> <td> CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 </td> <td> CTDSP2 </td> <td> 10106 </td> <td> NM_005730 /// XM_005268556 </td> <td> 0006470 // protein dephosphorylation // inferred from direct assay /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008420 // CTD phosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -93.22 </td> <td> 186.76 </td> <td> -5.96 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208996_s_at </td> <td> 208996_s_at </td> <td> BC000409 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000409.1 /DEF=Homo sapiens, polymerase (RNA) II (DNA directed) polypeptide C (33kD), clone MGC:8577, mRNA, complete cds.  /FEA=mRNA /PROD=polymerase (RNA) II (DNA directed) polypeptide C(33kD) /DB_XREF=gi:12653280 /UG=Hs.79402 polymerase (RNA) II (DNA directed) polypeptide C (33kD) /FL=gb:BC000409.1 gb:BC003159.1 gb:AF008443.1 gb:NM_002694.1 </td> <td> BC000409 </td> <td> polymerase (RNA) II (DNA directed) polypeptide C, 33kDa </td> <td> POLR2C </td> <td> 5432 </td> <td> NM_002694 /// NM_032940 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay </td> <td> 0001055 // RNA polymerase II activity // not recorded /// 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> 124.72 </td> <td> 290.91 </td> <td> 5.96 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 205443_at </td> <td> 205443_at </td> <td> NM_003082 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003082.1 /DEF=Homo sapiens small nuclear RNA activating complex, polypeptide 1, 43kD (SNAPC1), mRNA.  /FEA=mRNA /GEN=SNAPC1 /PROD=small nuclear RNA activating complex,polypeptide 1, 43kD /DB_XREF=gi:4507100 /UG=Hs.179312 small nuclear RNA activating complex, polypeptide 1, 43kD /FL=gb:U44754.1 gb:NM_003082.1 </td> <td> NM_003082 </td> <td> small nuclear RNA activating complex, polypeptide 1, 43kDa </td> <td> SNAPC1 </td> <td> 6617 </td> <td> NM_003082 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation </td> <td> -168.37 </td> <td> 185.49 </td> <td> -5.96 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218418_s_at </td> <td> 218418_s_at </td> <td> NM_015493 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015493.1 /DEF=Homo sapiens DKFZP434N161 protein (DKFZP434N161), mRNA. /FEA=mRNA /GEN=DKFZP434N161 /PROD=DKFZP434N161 protein /DB_XREF=gi:7661583 /UG=Hs.284208 DKFZP434N161 protein /FL=gb:NM_015493.1 </td> <td> NM_015493 </td> <td> KN motif and ankyrin repeat domains 2 </td> <td> KANK2 </td> <td> 25959 </td> <td> NM_001136191 /// NM_015493 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0043069 // negative regulation of programmed cell death // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 137.10 </td> <td> 181.07 </td> <td> 5.96 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 206472_s_at </td> <td> 206472_s_at </td> <td> NM_005078 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005078.1 /DEF=Homo sapiens transducin-like enhancer of split 3, homolog of Drosophila E(sp1) (TLE3), mRNA.  /FEA=mRNA /GEN=TLE3 /PROD=transducin-like enhancer of split 3, homolog ofDrosophila E(sp1) /DB_XREF=gi:4827029 /UG=Hs.287362 transducin-like enhancer of split 3, homolog of Drosophila E(sp1) /FL=gb:M99438.1 gb:NM_005078.1 </td> <td> NM_005078 </td> <td> transducin-like enhancer of split 3 </td> <td> TLE3 </td> <td> 7090 </td> <td> NM_001105192 /// NM_001282979 /// NM_001282980 /// NM_001282981 /// NM_001282982 /// NM_005078 /// NM_020908 /// XM_005254622 /// XM_005254623 /// XM_005254625 /// XM_005254628 /// XM_005254633 /// XM_006720662 /// XM_006720663 /// XM_006720664 /// XM_006720665 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -53.30 </td> <td> 54.00 </td> <td> -5.95 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 38157_at </td> <td> 38157_at </td> <td> AF059252 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AF059252:Homo sapiens clone 1 HLA class III protein Dom3z (DOM3Z) mRNA, complete cds /cds=(129,1319) /gb=AF059252 /gi=3372629 /ug=Hs.153299 /len=1386 </td> <td> AF059252 </td> <td> decapping exoribonuclease </td> <td> DXO </td> <td> 1797 </td> <td> NM_005510 /// XM_006715005 /// XM_006715006 /// XM_006715007 /// XM_006725474 /// XM_006725475 /// XM_006725476 /// XM_006725688 /// XM_006725689 /// XM_006725690 /// XM_006725898 /// XM_006725899 /// XM_006725900 /// XM_006725985 /// XM_006725986 /// XM_006725987 /// XM_006726078 /// XM_006726079 /// XM_006726080 /// XR_427826 /// XR_430856 /// XR_430934 /// XR_430935 /// XR_430996 /// XR_431013 /// XR_431043 </td> <td> 0006402 // mRNA catabolic process // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from sequence or structural similarity /// 0050779 // RNA destabilization // inferred from sequence or structural similarity /// 0071028 // nuclear mRNA surveillance // inferred from sequence or structural similarity /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from sequence or structural similarity /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0008409 // 5'-3' exonuclease activity // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0034353 // RNA pyrophosphohydrolase activity // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 48.68 </td> <td> 35.64 </td> <td> 5.95 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 217797_at </td> <td> 217797_at </td> <td> NM_016406 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016406.1 /DEF=Homo sapiens hypothetical protein (HSPC155), mRNA. /FEA=mRNA /GEN=HSPC155 /PROD=hypothetical protein /DB_XREF=gi:7705480 /UG=Hs.177507 hypothetical protein /FL=gb:BC005187.1 gb:AF151884.1 gb:AF161504.1 gb:NM_016406.1 </td> <td> NM_016406 </td> <td> ubiquitin-fold modifier conjugating enzyme 1 </td> <td> UFC1 </td> <td> 51506 </td> <td> NM_016406 /// XM_005245254 </td> <td> 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0071569 // protein ufmylation // inferred from direct assay /// 0071569 // protein ufmylation // inferred from mutant phenotype </td> <td> 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0071568 // UFM1 conjugating enzyme activity // inferred from direct assay </td> <td> 114.90 </td> <td> 373.15 </td> <td> 5.95 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 207292_s_at </td> <td> 207292_s_at </td> <td> NM_002749 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002749.1 /DEF=Homo sapiens mitogen-activated protein kinase 7 (MAPK7), mRNA. /FEA=mRNA /GEN=MAPK7 /PROD=mitogen-activated protein kinase 7 /DB_XREF=gi:4506092 /UG=Hs.3080 mitogen-activated protein kinase 7 /FL=gb:NM_002749.1 gb:U25278.1 </td> <td> NM_002749 </td> <td> mitogen-activated protein kinase 7 </td> <td> MAPK7 </td> <td> 5598 </td> <td> NM_002749 /// NM_139032 /// NM_139033 /// NM_139034 /// XM_005256719 /// XM_006721557 /// XM_006721558 /// XM_006721559 /// XM_006721560 </td> <td> 0000165 // MAPK cascade // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0019933 // cAMP-mediated signaling // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030821 // negative regulation of cAMP catabolic process // non-traceable author statement /// 0034115 // negative regulation of heterotypic cell-cell adhesion // inferred from genetic interaction /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0036003 // positive regulation of transcription from RNA polymerase II promoter in response to stress // inferred from mutant phenotype /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050728 // negative regulation of inflammatory response // traceable author statement /// 0051247 // positive regulation of protein metabolic process // inferred from genetic interaction /// 0051344 // negative regulation of cyclic-nucleotide phosphodiesterase activity // non-traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051534 // negative regulation of NFAT protein import into nucleus // inferred from electronic annotation /// 0060761 // negative regulation of response to cytokine stimulus // inferred from genetic interaction /// 0070301 // cellular response to hydrogen peroxide // inferred from mutant phenotype /// 0071363 // cellular response to growth factor stimulus // inferred from genetic interaction /// 0071499 // cellular response to laminar fluid shear stress // inferred from mutant phenotype /// 0071499 // cellular response to laminar fluid shear stress // traceable author statement /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from direct assay /// 1902176 // negative regulation of intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from mutant phenotype /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from mutant phenotype /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from genetic interaction </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016605 // PML body // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0051019 // mitogen-activated protein kinase binding // inferred from physical interaction </td> <td> -78.45 </td> <td> 71.62 </td> <td> -5.94 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 211450_s_at </td> <td> 211450_s_at </td> <td> D89646 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D89646.1 /DEF=Homo sapiens GTBP mRNA for GTBP-ALT, complete cds. /FEA=mRNA /GEN=GTBP /PROD=GTBP-ALT /DB_XREF=gi:2687868 /UG=Hs.3248 mutS (E. coli) homolog 6 /FL=gb:D89646.1 </td> <td> D89646 </td> <td> mutS homolog 6 </td> <td> MSH6 </td> <td> 2956 </td> <td> NM_000179 /// NM_001281492 /// NM_001281493 /// NM_001281494 /// XM_005264271 </td> <td> 0000710 // meiotic mismatch repair // not recorded /// 0000710 // meiotic mismatch repair // inferred from sequence or structural similarity /// 0006200 // ATP catabolic process // not recorded /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006281 // DNA repair // inferred from direct assay /// 0006298 // mismatch repair // inferred from direct assay /// 0006298 // mismatch repair // inferred from genetic interaction /// 0006298 // mismatch repair // inferred from mutant phenotype /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // not recorded /// 0008340 // determination of adult lifespan // inferred from sequence or structural similarity /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // not recorded /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from sequence or structural similarity /// 0009411 // response to UV // not recorded /// 0009411 // response to UV // inferred from sequence or structural similarity /// 0016446 // somatic hypermutation of immunoglobulin genes // not recorded /// 0016446 // somatic hypermutation of immunoglobulin genes // inferred from sequence or structural similarity /// 0016447 // somatic recombination of immunoglobulin gene segments // inferred from sequence or structural similarity /// 0043570 // maintenance of DNA repeat elements // inferred from mutant phenotype /// 0045190 // isotype switching // not recorded /// 0045190 // isotype switching // inferred from sequence or structural similarity /// 0045910 // negative regulation of DNA recombination // inferred from direct assay /// 0051096 // positive regulation of helicase activity // inferred from direct assay /// 0097193 // intrinsic apoptotic signaling pathway // inferred from sequence or structural similarity </td> <td> 0000228 // nuclear chromosome // not recorded /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0032301 // MutSalpha complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000400 // four-way junction DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008094 // DNA-dependent ATPase activity // not recorded /// 0016887 // ATPase activity // inferred from direct assay /// 0030983 // mismatched DNA binding // inferred from direct assay /// 0032137 // guanine/thymine mispair binding // inferred from direct assay /// 0032142 // single guanine insertion binding // inferred from direct assay /// 0032143 // single thymine insertion binding // inferred from direct assay /// 0032357 // oxidized purine DNA binding // inferred from direct assay /// 0032405 // MutLalpha complex binding // inferred from direct assay /// 0035064 // methylated histone binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043531 // ADP binding // inferred from direct assay </td> <td> 80.25 </td> <td> 83.42 </td> <td> 5.94 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209094_at </td> <td> 209094_at </td> <td> AL078459 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL078459 /DEF=Human DNA sequence from clone RP4-621F18 on chromosome 1p11.4-21.3. Contains the 3 end of the gene for ng,ng dimethylarginine dimethylaminohydrolase (EC 3.5.3.18), ESTs, STSs and GSSs /FEA=mRNA /DB_XREF=gi:5791502 /UG=Hs.303180 dimethylarginine dimethylaminohydrolase 1 /FL=gb:AB001915.1 gb:NM_012137.1 </td> <td> AL078459 </td> <td> dimethylarginine dimethylaminohydrolase 1 </td> <td> DDAH1 </td> <td> 23576 </td> <td> NM_001134445 /// NM_012137 /// XM_005270706 /// XM_005270707 /// XM_005270708 /// XM_005270709 /// XM_005270710 /// XM_006710543 /// XM_006710544 </td> <td> 0000052 // citrulline metabolic process // inferred from direct assay /// 0003073 // regulation of systemic arterial blood pressure // inferred from sequence or structural similarity /// 0006525 // arginine metabolic process // inferred from electronic annotation /// 0006527 // arginine catabolic process // traceable author statement /// 0007263 // nitric oxide mediated signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // traceable author statement /// 0016403 // dimethylargininase activity // inferred from direct assay /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016813 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 201.55 </td> <td> 547.62 </td> <td> 5.94 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202630_at </td> <td> 202630_at </td> <td> AA046411 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA046411 /FEA=EST /DB_XREF=gi:1526376 /DB_XREF=est:zf47b09.s1 /CLONE=IMAGE:380057 /UG=Hs.84084 amyloid beta precursor protein (cytoplasmic tail)-binding protein 2 /FL=gb:AF017782.1 gb:NM_006380.1 </td> <td> AA046411 </td> <td> amyloid beta precursor protein (cytoplasmic tail) binding protein 2 </td> <td> APPBP2 </td> <td> 10513 </td> <td> NM_001282476 /// NM_006380 /// XM_006721639 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0046907 // intracellular transport // inferred from direct assay </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // non-traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay </td> <td> 0003777 // microtubule motor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 53.85 </td> <td> 57.92 </td> <td> 5.94 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213852_at </td> <td> 213852_at </td> <td> BG289199 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG289199 /FEA=EST /DB_XREF=gi:13044802 /DB_XREF=est:602387595F1 /CLONE=IMAGE:4516438 /UG=Hs.65648 RNA binding motif protein 8A </td> <td> BG289199 </td> <td> RNA binding motif protein 8A </td> <td> RBM8A </td> <td> 9939 </td> <td> NM_005105 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from mutant phenotype /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003729 // mRNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 86.90 </td> <td> 128.22 </td> <td> 5.94 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 204466_s_at </td> <td> 204466_s_at </td> <td> BG260394 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG260394 /FEA=EST /DB_XREF=gi:12770210 /DB_XREF=est:602371523F1 /CLONE=IMAGE:4479556 /UG=Hs.76930 synuclein, alpha (non A4 component of amyloid precursor) /FL=gb:L08850.1 gb:NM_000345.2 </td> <td> BG260394 </td> <td> synuclein, alpha (non A4 component of amyloid precursor) </td> <td> SNCA </td> <td> 6622 </td> <td> NM_000345 /// NM_001146054 /// NM_001146055 /// NM_007308 </td> <td> 0001774 // microglial cell activation // inferred from electronic annotation /// 0001921 // positive regulation of receptor recycling // inferred from direct assay /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001956 // positive regulation of neurotransmitter secretion // inferred from electronic annotation /// 0001963 // synaptic transmission, dopaminergic // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006638 // neutral lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007006 // mitochondrial membrane organization // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0010040 // response to iron(II) ion // inferred from direct assay /// 0010517 // regulation of phospholipase activity // inferred from direct assay /// 0010642 // negative regulation of platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0014048 // regulation of glutamate secretion // inferred from electronic annotation /// 0014059 // regulation of dopamine secretion // traceable author statement /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0031623 // receptor internalization // inferred from direct assay /// 0031648 // protein destabilization // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from direct assay /// 0032410 // negative regulation of transporter activity // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032769 // negative regulation of monooxygenase activity // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from direct assay /// 0034599 // cellular response to oxidative stress // inferred from electronic annotation /// 0035067 // negative regulation of histone acetylation // inferred from direct assay /// 0040012 // regulation of locomotion // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042416 // dopamine biosynthetic process // traceable author statement /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042775 // mitochondrial ATP synthesis coupled electron transport // inferred from electronic annotation /// 0043030 // regulation of macrophage activation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043206 // extracellular fibril organization // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from direct assay /// 0045920 // negative regulation of exocytosis // inferred from mutant phenotype /// 0045963 // negative regulation of dopamine metabolic process // inferred from electronic annotation /// 0046928 // regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048148 // behavioral response to cocaine // inferred from electronic annotation /// 0048168 // regulation of neuronal synaptic plasticity // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048488 // synaptic vesicle endocytosis // inferred from sequence or structural similarity /// 0048489 // synaptic vesicle transport // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0050812 // regulation of acyl-CoA biosynthetic process // inferred from electronic annotation /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051583 // dopamine uptake involved in synaptic transmission // traceable author statement /// 0051585 // negative regulation of dopamine uptake involved in synaptic transmission // inferred from direct assay /// 0051612 // negative regulation of serotonin uptake // inferred from direct assay /// 0051622 // negative regulation of norepinephrine uptake // inferred from direct assay /// 0055074 // calcium ion homeostasis // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0060732 // positive regulation of inositol phosphate biosynthetic process // inferred from direct assay /// 0070495 // negative regulation of thrombin receptor signaling pathway // inferred from direct assay /// 0070555 // response to interleukin-1 // inferred from direct assay /// 0071280 // cellular response to copper ion // inferred from direct assay /// 0071872 // cellular response to epinephrine stimulus // traceable author statement /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 1901214 // regulation of neuron death // inferred from genetic interaction </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016234 // inclusion body // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030426 // growth cone // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // inferred from direct assay /// 0043195 // terminal bouton // inferred from electronic annotation /// 0043205 // fibril // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0005504 // fatty acid binding // inferred from direct assay /// 0005507 // copper ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008198 // ferrous iron binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0019894 // kinesin binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0043014 // alpha-tubulin binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0045502 // dynein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0050544 // arachidonic acid binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from direct assay /// 0060961 // phospholipase D inhibitor activity // inferred from direct assay </td> <td> 169.40 </td> <td> 492.52 </td> <td> 5.94 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 215884_s_at </td> <td> 215884_s_at </td> <td> AK001029 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001029.1 /DEF=Homo sapiens cDNA FLJ10167 fis, clone HEMBA1003617, highly similar to Homo sapiens HRIHFB2157 mRNA.  /FEA=mRNA /DB_XREF=gi:7022050 /UG=Hs.4552 ubiquilin 2 </td> <td> AK001029 </td> <td> ubiquilin 2 </td> <td> UBQLN2 </td> <td> 29978 </td> <td> NM_013444 </td> <td> 0006289 // nucleotide-excision repair // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0003684 // damaged DNA binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 57.57 </td> <td> 118.01 </td> <td> 5.94 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213229_at </td> <td> 213229_at </td> <td> BF590131 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF590131 /FEA=EST /DB_XREF=gi:11682455 /DB_XREF=est:nab19e04.x1 /CLONE=IMAGE:3266383 /UG=Hs.87889 helicase-moi </td> <td> BF590131 </td> <td> dicer 1, ribonuclease type III </td> <td> DICER1 </td> <td> 23405 </td> <td> NM_001195573 /// NM_001271282 /// NM_001291628 /// NM_030621 /// NM_177438 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010070 // zygote asymmetric cell division // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010626 // negative regulation of Schwann cell proliferation // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0014040 // positive regulation of Schwann cell differentiation // inferred from sequence or structural similarity /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021675 // nerve development // inferred from sequence or structural similarity /// 0021889 // olfactory bulb interneuron differentiation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030422 // production of siRNA involved in RNA interference // inferred from direct assay /// 0030423 // targeting of mRNA for destruction involved in RNA interference // inferred from mutant phenotype /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031054 // pre-miRNA processing // inferred from direct assay /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031641 // regulation of myelination // inferred from electronic annotation /// 0031643 // positive regulation of myelination // inferred from sequence or structural similarity /// 0032290 // peripheral nervous system myelin formation // inferred from sequence or structural similarity /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from sequence or structural similarity /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042487 // regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045069 // regulation of viral genome replication // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048713 // regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0055013 // cardiac muscle cell development // inferred from electronic annotation /// 0060119 // inner ear receptor cell development // inferred from electronic annotation /// 0060576 // intestinal epithelial cell development // inferred from electronic annotation /// 0070173 // regulation of enamel mineralization // inferred from electronic annotation /// 0071335 // hair follicle cell proliferation // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090501 // RNA phosphodiester bond hydrolysis // inferred from direct assay /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from direct assay /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation /// 2000630 // positive regulation of miRNA metabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016442 // RISC complex // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004525 // ribonuclease III activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016891 // endoribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0035198 // miRNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 104.35 </td> <td> 87.95 </td> <td> 5.94 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 203455_s_at </td> <td> 203455_s_at </td> <td> NM_002970 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002970.1 /DEF=Homo sapiens spermidinespermine N1-acetyltransferase (SAT), mRNA. /FEA=mRNA /GEN=SAT /PROD=spermidinespermine N1-acetyltransferase /DB_XREF=gi:4506788 /UG=Hs.28491 spermidinespermine N1-acetyltransferase /FL=gb:BC002503.1 gb:M77693.1 gb:NM_002970.1 </td> <td> NM_002970 </td> <td> spermidine/spermine N1-acetyltransferase 1 </td> <td> SAT1 </td> <td> 6303 </td> <td> NM_002970 /// NR_027783 </td> <td> 0001525 // angiogenesis // inferred from expression pattern /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // traceable author statement /// 0006598 // polyamine catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009447 // putrescine catabolic process // inferred from electronic annotation /// 0032918 // spermidine acetylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004145 // diamine N-acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019809 // spermidine binding // inferred from electronic annotation </td> <td> -324.82 </td> <td> 548.26 </td> <td> -5.93 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202140_s_at </td> <td> 202140_s_at </td> <td> NM_003992 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003992.1 /DEF=Homo sapiens CDC-like kinase 3 (CLK3), transcript variant phclk3, mRNA.  /FEA=mRNA /GEN=CLK3 /PROD=CDC-like kinase 3 isoform hclk3 /DB_XREF=gi:4502884 /UG=Hs.73987 CDC-like kinase 3 /FL=gb:BC002555.1 gb:NM_003992.1 gb:L29217.1 </td> <td> NM_003992 </td> <td> CDC-like kinase 3 </td> <td> CLK3 </td> <td> 1198 </td> <td> NM_001130028 /// NM_001292 /// NM_003992 /// XM_005254151 /// XM_005254152 /// XM_005254153 /// XM_005254154 /// XM_006720383 /// XM_006720384 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -65.97 </td> <td> 107.36 </td> <td> -5.93 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202392_s_at </td> <td> 202392_s_at </td> <td> NM_014338 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014338.1 /DEF=Homo sapiens phosphatidylserine decarboxylase (PISD), mRNA. /FEA=mRNA /GEN=PISD /PROD=phosphatidylserine decarboxylase /DB_XREF=gi:13489111 /UG=Hs.8128 phosphatidylserine decarboxylase /FL=gb:NM_014338.1 </td> <td> NM_014338 </td> <td> microRNA 7109 /// phosphatidylserine decarboxylase </td> <td> MIR7109 /// PISD </td> <td> 23761 /// 102465666 </td> <td> NM_014338 /// NR_106959 /// XM_005261455 /// XM_005261456 /// XM_005261457 /// XM_005261458 /// XM_005261459 /// XM_005261460 /// XM_005261461 /// XM_005261462 /// XM_006724199 /// XM_006724200 /// XM_006724201 /// XM_006724202 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006646 // phosphatidylethanolamine biosynthetic process // inferred from electronic annotation /// 0006646 // phosphatidylethanolamine biosynthetic process // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0004609 // phosphatidylserine decarboxylase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation </td> <td> 59.42 </td> <td> 57.01 </td> <td> 5.93 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200992_at </td> <td> 200992_at </td> <td> AL137335 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL137335.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434A179 (from clone DKFZp434A179); partial cds.  /FEA=mRNA /GEN=DKFZp434A179 /PROD=hypothetical protein /DB_XREF=gi:6807827 /UG=Hs.5151 RAN binding protein 7 /FL=gb:AF098799.1 gb:NM_006391.1 </td> <td> AL137335 </td> <td> importin 7 </td> <td> IPO7 </td> <td> 10527 </td> <td> NM_006391 </td> <td> 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0005083 // small GTPase regulator activity // traceable author statement /// 0005215 // transporter activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from electronic annotation </td> <td> -139.62 </td> <td> 566.61 </td> <td> -5.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218932_at </td> <td> 218932_at </td> <td> NM_017953 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017953.1 /DEF=Homo sapiens hypothetical protein FLJ20729 (FLJ20729), mRNA. /FEA=mRNA /GEN=FLJ20729 /PROD=hypothetical protein FLJ20729 /DB_XREF=gi:8923654 /UG=Hs.5111 hypothetical protein FLJ20729 /FL=gb:AL442074.1 gb:NM_017953.1 </td> <td> NM_017953 </td> <td> zinc finger, HIT-type containing 6 </td> <td> ZNHIT6 </td> <td> 54680 </td> <td> NM_001170670 /// NM_017953 /// XM_006710703 </td> <td> 0000492 // box C/D snoRNP assembly // inferred from mutant phenotype /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070761 // pre-snoRNP complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 55.17 </td> <td> 121.61 </td> <td> 5.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 221752_at </td> <td> 221752_at </td> <td> AL041728 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL041728 /FEA=EST /DB_XREF=gi:5421076 /DB_XREF=est:DKFZp434O0717_s1 /CLONE=DKFZp434O0717 /UG=Hs.60377 KIAA1298 protein </td> <td> AL041728 </td> <td> slingshot protein phosphatase 1 </td> <td> SSH1 </td> <td> 54434 </td> <td> NM_001161330 /// NM_001161331 /// NM_018984 /// XM_005268984 /// XM_005268985 /// XM_005268986 /// XM_006719466 </td> <td> 0000902 // cell morphogenesis // inferred from mutant phenotype /// 0006470 // protein dephosphorylation // inferred from mutant phenotype /// 0008064 // regulation of actin polymerization or depolymerization // not recorded /// 0010591 // regulation of lamellipodium assembly // not recorded /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from mutant phenotype /// 0032268 // regulation of cellular protein metabolic process // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // not recorded /// 0071318 // cellular response to ATP // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from mutant phenotype /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> -370.98 </td> <td> 384.94 </td> <td> -5.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200010_at </td> <td> 200010_at </td> <td> NM_000975 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000975.1 /DEF=Homo sapiens ribosomal protein L11 (RPL11), mRNA. /FEA=mRNA /GEN=RPL11 /PROD=ribosomal protein L11 /DB_XREF=gi:4506594 /UG=Hs.179943 ribosomal protein L11 /FL=gb:L05092.1 gb:NM_000975.1 </td> <td> NM_000975 </td> <td> ribosomal protein L11 </td> <td> RPL11 </td> <td> 6135 </td> <td> NM_000975 /// NM_001199802 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006605 // protein targeting // inferred from mutant phenotype /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0034504 // protein localization to nucleus // inferred from sequence or structural similarity /// 0042273 // ribosomal large subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -892.55 </td> <td> 2566.00 </td> <td> -5.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 217744_s_at </td> <td> 217744_s_at </td> <td> NM_022121 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022121.1 /DEF=Homo sapiens p53-induced protein PIGPC1 (PIGPC1), mRNA. /FEA=mRNA /GEN=PIGPC1 /PROD=p53-induced protein PIGPC1 /DB_XREF=gi:11545842 /UG=Hs.303125 p53-induced protein PIGPC1 /FL=gb:AF317550.1 gb:NM_022121.1 </td> <td> NM_022121 </td> <td> PERP, TP53 apoptosis effector </td> <td> PERP </td> <td> 64065 </td> <td> NM_022121 </td> <td> 0002934 // desmosome organization // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0034113 // heterotypic cell-cell adhesion // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from direct assay /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from electronic annotation /// 0097186 // amelogenesis // inferred from electronic annotation /// 0097202 // activation of cysteine-type endopeptidase activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030057 // desmosome // inferred from electronic annotation </td> <td>  </td> <td> -121.88 </td> <td> 256.14 </td> <td> -5.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212368_at </td> <td> 212368_at </td> <td> AA972711 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA972711 /FEA=EST /DB_XREF=gi:3147891 /DB_XREF=est:op90e07.s1 /CLONE=IMAGE:1584132 /UG=Hs.173081 KIAA0530 protein </td> <td> AA972711 </td> <td> zinc finger protein 292 </td> <td> ZNF292 </td> <td> 23036 </td> <td> NM_015021 /// XM_005248697 /// XM_005248698 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -215.85 </td> <td> 179.65 </td> <td> -5.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202228_s_at </td> <td> 202228_s_at </td> <td> NM_017455 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017455.1 /DEF=Homo sapiens stromal cell derived factor receptor 1 (SDFR1), transcript variant alpha, mRNA.  /FEA=mRNA /GEN=SDFR1 /PROD=stromal cell derived factor receptor 1 isoforma /DB_XREF=gi:9257239 /UG=Hs.6354 stromal cell derived factor receptor 1 /FL=gb:AF109127.1 gb:NM_017455.1 </td> <td> NM_017455 </td> <td> neuroplastin </td> <td> NPTN </td> <td> 27020 </td> <td> NM_001161363 /// NM_001161364 /// NM_012428 /// NM_017455 /// XM_005254304 /// XR_429449 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from sequence or structural similarity /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0045743 // positive regulation of fibroblast growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0048170 // positive regulation of long-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0060291 // long-term synaptic potentiation // inferred from sequence or structural similarity </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity </td> <td> 0005105 // type 1 fibroblast growth factor receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from sequence or structural similarity </td> <td> 216.35 </td> <td> 575.77 </td> <td> 5.92 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 203556_at </td> <td> 203556_at </td> <td> NM_014943 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014943.1 /DEF=Homo sapiens KIAA0854 protein (KIAA0854), mRNA. /FEA=mRNA /GEN=KIAA0854 /PROD=KIAA0854 protein /DB_XREF=gi:7662341 /UG=Hs.30209 KIAA0854 protein /FL=gb:AB020661.1 gb:NM_014943.1 </td> <td> NM_014943 </td> <td> zinc fingers and homeoboxes 2 </td> <td> ZHX2 </td> <td> 22882 </td> <td> NM_014943 /// XM_005250836 /// XM_005250837 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006402 // mRNA catabolic process // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay </td> <td> -46.38 </td> <td> 44.46 </td> <td> -5.91 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218194_at </td> <td> 218194_at </td> <td> NM_015523 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015523.1 /DEF=Homo sapiens small fragment nuclease (DKFZP566E144), mRNA. /FEA=mRNA /GEN=DKFZP566E144 /PROD=small fragment nuclease /DB_XREF=gi:7661645 /UG=Hs.7527 small fragment nuclease /FL=gb:AF151872.1 gb:AL110239.1 gb:NM_015523.1 </td> <td> NM_015523 </td> <td> RNA exonuclease 2 </td> <td> REXO2 </td> <td> 25996 </td> <td> NM_015523 </td> <td> 0006139 // nucleobase-containing compound metabolic process // inferred from direct assay /// 0009117 // nucleotide metabolic process // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0008408 // 3'-5' exonuclease activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation </td> <td> 145.98 </td> <td> 680.21 </td> <td> 5.91 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218277_s_at </td> <td> 218277_s_at </td> <td> NM_024612 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024612.1 /DEF=Homo sapiens hypothetical protein FLJ22060 (FLJ22060), mRNA. /FEA=mRNA /GEN=FLJ22060 /PROD=hypothetical protein FLJ22060 /DB_XREF=gi:13375824 /UG=Hs.29403 hypothetical protein FLJ22060 /FL=gb:NM_024612.1 </td> <td> NM_024612 </td> <td> DEAH (Asp-Glu-Ala-His) box polypeptide 40 </td> <td> DHX40 </td> <td> 79665 </td> <td> NM_001166301 /// NM_024612 /// XM_003846599 /// XM_006722083 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation </td> <td>  </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -87.02 </td> <td> 185.29 </td> <td> -5.91 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208999_at </td> <td> 208999_at </td> <td> D86957 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D86957.1 /DEF=Human mRNA for KIAA0202 gene, partial cds. /FEA=mRNA /GEN=KIAA0202 /DB_XREF=gi:1503987 /UG=Hs.80712 KIAA0202 protein /FL=gb:BC001329.1 </td> <td> D86957 </td> <td> septin 8 </td> <td> SEPT8 </td> <td> 23176 </td> <td> NM_001098811 /// NM_001098812 /// NM_001098813 /// NM_015146 /// XM_005271927 /// XM_005271928 /// XM_005271929 /// XM_005271930 /// XM_005271931 </td> <td> 0007049 // cell cycle // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 96.03 </td> <td> 165.66 </td> <td> 5.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212114_at </td> <td> 212114_at </td> <td> BE967207 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE967207 /FEA=EST /DB_XREF=gi:11773627 /DB_XREF=est:601661094R1 /CLONE=IMAGE:3916174 /UG=Hs.165590 ribosomal protein S13 </td> <td> BE967207 </td> <td> ataxin 7-like 3B </td> <td> ATXN7L3B </td> <td> 552889 </td> <td> NM_001136262 </td> <td>  </td> <td>  </td> <td>  </td> <td> 164.83 </td> <td> 239.44 </td> <td> 5.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213574_s_at </td> <td> 213574_s_at </td> <td> AA861608 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA861608 /FEA=EST /DB_XREF=gi:2953748 /DB_XREF=est:ak34e01.s1 /CLONE=IMAGE:1407864 /UG=Hs.180446 karyopherin (importin) beta 1 </td> <td> AA861608 </td> <td> karyopherin (importin) beta 1 </td> <td> KPNB1 </td> <td> 3837 </td> <td> NM_001276453 /// NM_002265 </td> <td> 0000060 // protein import into nucleus, translocation // traceable author statement /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006610 // ribosomal protein import into nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071782 // endoplasmic reticulum tubular network // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008270 // zinc ion binding // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 178.57 </td> <td> 313.34 </td> <td> 5.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201596_x_at </td> <td> 201596_x_at </td> <td> NM_000224 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000224.1 /DEF=Homo sapiens keratin 18 (KRT18), mRNA. /FEA=mRNA /GEN=KRT18 /PROD=keratin 18 /DB_XREF=gi:4557887 /UG=Hs.65114 keratin 18 /FL=gb:BC000698.1 gb:BC000180.2 gb:BC004253.1 gb:M26326.1 gb:NM_000224.1 </td> <td> NM_000224 </td> <td> keratin 18 </td> <td> KRT18 </td> <td> 3875 </td> <td> NM_000224 /// NM_199187 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from electronic annotation /// 0043000 // Golgi to plasma membrane CFTR protein transport // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045104 // intermediate filament cytoskeleton organization // inferred from direct assay /// 0097191 // extrinsic apoptotic signaling pathway // inferred from electronic annotation /// 0097284 // hepatocyte apoptotic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005882 // intermediate filament // inferred from direct assay /// 0034451 // centriolar satellite // inferred from direct assay /// 0045095 // keratin filament // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0097110 // scaffold protein binding // inferred from physical interaction </td> <td> 447.20 </td> <td> 700.10 </td> <td> 5.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212109_at </td> <td> 212109_at </td> <td> AI590869 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI590869 /FEA=EST /DB_XREF=gi:4599917 /DB_XREF=est:tw88g03.x1 /CLONE=IMAGE:2266804 /UG=Hs.172035 hypothetical protein similar to mouse  HN1 (Hematological and Neurological expressed sequence 1) </td> <td> AI590869 </td> <td> hematological and neurological expressed 1-like </td> <td> HN1L </td> <td> 90861 </td> <td> NM_144570 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td>  </td> <td> 55.85 </td> <td> 46.52 </td> <td> 5.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 221087_s_at </td> <td> 221087_s_at </td> <td> NM_014349 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014349.1 /DEF=Homo sapiens apolipoprotein L, 3 (APOL3), mRNA. /FEA=mRNA /GEN=APOL3 /PROD=apolipoprotein L, 3 /DB_XREF=gi:7656972 /UG=Hs.241535 apolipoprotein L, 3 /FL=gb:AY014905.1 gb:AF070675.1 gb:NM_014349.1 </td> <td> NM_014349 </td> <td> apolipoprotein L, 3 </td> <td> APOL3 </td> <td> 80833 </td> <td> NM_014349 /// NM_030644 /// NM_145639 /// NM_145640 /// NM_145641 /// NM_145642 /// NR_027833 /// NR_027834 /// NR_027835 /// XM_006724322 /// XM_006724323 /// XM_006724324 /// XM_006724325 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005319 // lipid transporter activity // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation </td> <td> -93.33 </td> <td> 72.46 </td> <td> -5.90 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213115_at </td> <td> 213115_at </td> <td> AL031177 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL031177 /DEF=Human DNA sequence from clone 889N15 on chromosome Xq22.1-22.3. Contains part of the gene for a novel protein similar to X. laevis Cortical Thymocyte Marker CTX, the possibly alternatively spliced gene for 26S Proteasome subunit p28 (Ankyrin repea... /FEA=mRNA_3 /DB_XREF=gi:4071056 /UG=Hs.8763 Human DNA sequence from clone 889N15 on chromosome Xq22.1-22.3. Contains part of the gene for a novel protein similar to X. laevis Cortical Thymocyte Marker CTX, the possibly alternatively spliced gene for 26S Proteasome subunit p28 (Ankyrin repeat protei </td> <td> AL031177 </td> <td> autophagy related 4A, cysteine peptidase </td> <td> ATG4A </td> <td> 115201 </td> <td> NM_052936 /// NM_178270 /// NM_178271 /// XM_005262064 </td> <td> 0000045 // autophagic vacuole assembly // not recorded /// 0000422 // mitochondrion degradation // not recorded /// 0006501 // C-terminal protein lipidation // not recorded /// 0006508 // proteolysis // inferred from direct assay /// 0006612 // protein targeting to membrane // not recorded /// 0006810 // transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006995 // cellular response to nitrogen starvation // not recorded /// 0015031 // protein transport // inferred from electronic annotation /// 0016485 // protein processing // not recorded /// 0034727 // piecemeal microautophagy of nucleus // not recorded /// 0044805 // late nucleophagy // not recorded /// 0051697 // protein delipidation // not recorded </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // not recorded </td> <td> 0004197 // cysteine-type endopeptidase activity // not recorded /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 68.13 </td> <td> 116.06 </td> <td> 5.89 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218268_at </td> <td> 218268_at </td> <td> NM_022771 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022771.1 /DEF=Homo sapiens hypothetical protein FLJ12085 (FLJ12085), mRNA. /FEA=mRNA /GEN=FLJ12085 /PROD=hypothetical protein FLJ12085 /DB_XREF=gi:12232450 /UG=Hs.48827 hypothetical protein FLJ12085 /FL=gb:NM_022771.1 </td> <td> NM_022771 </td> <td> TBC1 domain family, member 15 </td> <td> TBC1D15 </td> <td> 64786 </td> <td> NM_001146213 /// NM_001146214 /// NM_022771 /// NR_027449 /// XM_006719563 /// XM_006719564 /// XM_006719565 /// XM_006719566 /// XM_006719567 </td> <td> 0032313 // regulation of Rab GTPase activity // inferred from sequence or structural similarity /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction </td> <td> -66.40 </td> <td> 117.12 </td> <td> -5.89 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 205051_s_at </td> <td> 205051_s_at </td> <td> NM_000222 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000222.1 /DEF=Homo sapiens v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog (KIT), mRNA.  /FEA=mRNA /GEN=KIT /PROD=v-kit Hardy-Zuckerman 4 feline sarcoma viraloncogene homolog precursor /DB_XREF=gi:4557694 /UG=Hs.81665 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog /FL=gb:NM_000222.1 </td> <td> NM_000222 </td> <td> v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog </td> <td> KIT </td> <td> 3815 </td> <td> NM_000222 /// NM_001093772 /// XM_005265740 /// XM_005265741 /// XM_005265742 /// XM_006714038 </td> <td> 0000187 // activation of MAPK activity // inferred from direct assay /// 0001541 // ovarian follicle development // inferred from sequence or structural similarity /// 0002318 // myeloid progenitor cell differentiation // inferred from electronic annotation /// 0002320 // lymphoid progenitor cell differentiation // inferred from electronic annotation /// 0002327 // immature B cell differentiation // inferred from sequence or structural similarity /// 0002371 // dendritic cell cytokine production // inferred from sequence or structural similarity /// 0002551 // mast cell chemotaxis // inferred from direct assay /// 0002573 // myeloid leukocyte differentiation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006687 // glycosphingolipid metabolic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008584 // male gonad development // inferred from expression pattern /// 0009314 // response to radiation // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010863 // positive regulation of phospholipase C activity // traceable author statement /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019827 // stem cell maintenance // traceable author statement /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // traceable author statement /// 0030032 // lamellipodium assembly // inferred from sequence or structural similarity /// 0030097 // hemopoiesis // traceable author statement /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030318 // melanocyte differentiation // inferred from sequence or structural similarity /// 0030318 // melanocyte differentiation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031274 // positive regulation of pseudopodium assembly // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0032762 // mast cell cytokine production // inferred from direct assay /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from sequence or structural similarity /// 0035234 // ectopic germ cell programmed cell death // inferred from electronic annotation /// 0035855 // megakaryocyte development // inferred from sequence or structural similarity /// 0038093 // Fc receptor signaling pathway // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038109 // Kit signaling pathway // inferred from direct assay /// 0038162 // erythropoietin-mediated signaling pathway // inferred from sequence or structural similarity /// 0042127 // regulation of cell proliferation // traceable author statement /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0042523 // positive regulation of tyrosine phosphorylation of Stat5 protein // inferred from mutant phenotype /// 0043069 // negative regulation of programmed cell death // inferred from electronic annotation /// 0043303 // mast cell degranulation // inferred from mutant phenotype /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0043473 // pigmentation // inferred from sequence or structural similarity /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048070 // regulation of developmental pigmentation // inferred from electronic annotation /// 0048103 // somatic stem cell division // inferred from electronic annotation /// 0048170 // positive regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from sequence or structural similarity /// 0048863 // stem cell differentiation // inferred from sequence or structural similarity /// 0050673 // epithelial cell proliferation // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from sequence or structural similarity /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0060326 // cell chemotaxis // inferred from direct assay /// 0060374 // mast cell differentiation // inferred from sequence or structural similarity /// 0060374 // mast cell differentiation // traceable author statement /// 0070662 // mast cell proliferation // traceable author statement /// 0097067 // cellular response to thyroid hormone stimulus // inferred from electronic annotation /// 0097324 // melanocyte migration // inferred from sequence or structural similarity /// 0097326 // melanocyte adhesion // inferred from sequence or structural similarity </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009898 // cytoplasmic side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0042629 // mast cell granule // inferred from mutant phenotype </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0004716 // receptor signaling protein tyrosine kinase activity // inferred from electronic annotation /// 0005020 // stem cell factor receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019955 // cytokine binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 111.57 </td> <td> 215.04 </td> <td> 5.89 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202498_s_at </td> <td> 202498_s_at </td> <td> BE550486 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE550486 /FEA=EST /DB_XREF=gi:9792178 /DB_XREF=est:7a27c01.x1 /CLONE=IMAGE:3219936 /UG=Hs.7594 solute carrier family 2 (facilitated glucose transporter), member 3 /FL=gb:M20681.1 gb:NM_006931.1 </td> <td> BE550486 </td> <td> solute carrier family 2 (facilitated glucose transporter), member 3 </td> <td> SLC2A3 </td> <td> 6515 </td> <td> NM_006931 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation </td> <td> -68.55 </td> <td> 52.40 </td> <td> -5.89 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200897_s_at </td> <td> 200897_s_at </td> <td> NM_016081 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016081.1 /DEF=Homo sapiens palladin (KIAA0992), mRNA. /FEA=mRNA /GEN=KIAA0992 /PROD=palladin /DB_XREF=gi:7706354 /UG=Hs.194431 palladin /FL=gb:AF077041.1 gb:AF151909.1 gb:NM_016081.1 </td> <td> NM_016081 </td> <td> palladin, cytoskeletal associated protein </td> <td> PALLD </td> <td> 23022 </td> <td> NM_001166108 /// NM_001166109 /// NM_001166110 /// NM_016081 /// XM_005262861 /// XM_005262862 /// XM_005262863 /// XM_005262864 /// XM_005262865 /// XM_005262866 </td> <td> 0007010 // cytoskeleton organization // non-traceable author statement </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0051371 // muscle alpha-actinin binding // traceable author statement </td> <td> 112.70 </td> <td> 357.25 </td> <td> 5.89 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 221730_at </td> <td> 221730_at </td> <td> NM_000393 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_000393.1 /DEF=Homo sapiens collagen, type V, alpha 2 (COL5A2), mRNA. /FEA=CDS /GEN=COL5A2 /PROD=collagen, type V, alpha 2 /DB_XREF=gi:4502958 /UG=Hs.82985 collagen, type V, alpha 2 /FL=gb:NM_000393.1 </td> <td> NM_000393 </td> <td> collagen, type V, alpha 2 </td> <td> COL5A2 </td> <td> 1290 </td> <td> NM_000393 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030199 // collagen fibril organization // inferred from mutant phenotype /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030574 // collagen catabolic process // traceable author statement /// 0043588 // skin development // inferred from mutant phenotype /// 0043588 // skin development // inferred from sequence or structural similarity /// 0048592 // eye morphogenesis // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005588 // collagen type V trimer // inferred from mutant phenotype /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0031012 // extracellular matrix // non-traceable author statement </td> <td> 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -241.37 </td> <td> 441.36 </td> <td> -5.88 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201623_s_at </td> <td> 201623_s_at </td> <td> BC000629 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000629.1 /DEF=Homo sapiens, Similar to aspartyl-tRNA synthetase, clone MGC:1562, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to aspartyl-tRNA synthetase /DB_XREF=gi:12653688 /UG=Hs.80758 aspartyl-tRNA synthetase /FL=gb:BC000629.1 gb:J05032.1 gb:NM_001349.1 </td> <td> BC000629 </td> <td> aspartyl-tRNA synthetase </td> <td> DARS </td> <td> 1615 </td> <td> NM_001293312 /// NM_001349 </td> <td> 0006412 // translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006422 // aspartyl-tRNA aminoacylation // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004046 // aminoacylase activity // traceable author statement /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004815 // aspartate-tRNA ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -174.60 </td> <td> 369.20 </td> <td> -5.88 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 204517_at </td> <td> 204517_at </td> <td> BE962749 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE962749 /FEA=EST /DB_XREF=gi:11765968 /DB_XREF=est:601656143R1 /CLONE=IMAGE:3855754 /UG=Hs.110364 peptidylprolyl isomerase C (cyclophilin C) /FL=gb:BC002678.1 gb:NM_000943.1 </td> <td> BE962749 </td> <td> peptidylprolyl isomerase C (cyclophilin C) </td> <td> PPIC </td> <td> 5480 </td> <td> NM_000943 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0016018 // cyclosporin A binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement </td> <td> 64.17 </td> <td> 208.41 </td> <td> 5.88 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 217995_at </td> <td> 217995_at </td> <td> NM_021199 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021199.1 /DEF=Homo sapiens CGI-44 protein; sulfide dehydrogenase like (yeast) (CGI-44), mRNA.  /FEA=mRNA /GEN=CGI-44 /PROD=CGI-44 protein; sulfide dehydrogenase like(yeast) /DB_XREF=gi:10864010 /UG=Hs.8185 CGI-44 protein; sulfide dehydrogenase like (yeast) /FL=gb:NM_021199.1 gb:AF151802.1 gb:AF118085.1 </td> <td> NM_021199 </td> <td> sulfide quinone reductase-like (yeast) </td> <td> SQRDL </td> <td> 58472 </td> <td> NM_001271213 /// NM_021199 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0000098 // sulfur amino acid catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070221 // sulfide oxidation, using sulfide:quinone oxidoreductase // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement </td> <td> 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0070224 // sulfide:quinone oxidoreductase activity // traceable author statement </td> <td> -68.32 </td> <td> 124.51 </td> <td> -5.88 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200015_s_at </td> <td> 200015_s_at </td> <td> NM_004404 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004404.1 /DEF=Homo sapiens neural precursor cell expressed, developmentally down-regulated 5 (NEDD5), mRNA.  /FEA=mRNA /GEN=NEDD5 /PROD=neural precursor cell expressed, developmentallydown-regulated 5 /DB_XREF=gi:4758157 /UG=Hs.155595 neural precursor cell expressed, developmentally down-regulated 5 /FL=gb:D28540.1 gb:NM_004404.1 gb:D63878.1 </td> <td> NM_004404 </td> <td> septin 2 </td> <td> SEPT2 </td> <td> 4735 </td> <td> NM_001008491 /// NM_001008492 /// NM_001282972 /// NM_001282973 /// NM_004404 /// NM_006155 /// XM_005247011 /// XM_005247012 /// XM_005247013 /// XM_006712546 /// XM_006712547 /// XM_006712548 /// XM_006712549 /// XM_006712550 </td> <td> 0002036 // regulation of L-glutamate transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000145 // exocyst // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0060170 // ciliary membrane // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from electronic annotation </td> <td> 226.27 </td> <td> 1125.76 </td> <td> 5.87 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202377_at </td> <td> 202377_at </td> <td> AW026535 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW026535 /FEA=EST /DB_XREF=gi:5880065 /DB_XREF=est:wv14f10.x1 /CLONE=IMAGE:2529547 /UG=Hs.23581 leptin receptor gene-related protein /FL=gb:NM_017526.1 </td> <td> AW026535 </td> <td> leptin receptor overlapping transcript </td> <td> LEPROT </td> <td> 54741 </td> <td> NM_001198681 /// NM_001198683 /// NM_017526 </td> <td> 0046426 // negative regulation of JAK-STAT cascade // inferred from direct assay /// 0060400 // negative regulation of growth hormone receptor signaling pathway // inferred from direct assay /// 2000009 // negative regulation of protein localization to cell surface // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005102 // receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 144.38 </td> <td> 460.81 </td> <td> 5.87 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 206853_s_at </td> <td> 206853_s_at </td> <td> AL121964 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL121964 /DEF=Human DNA sequence from clone RP1-154G14 on chromosome 6q15-16.3. Contains the 3 end of the MAP3K7 gene for mitogen-activated protein kinase kinase kinase 7 (TGF-beta activated kinase 1, TAK1), ESTs, STSs and GSSs /FEA=mRNA_2 /DB_XREF=gi:6996467 /UG=Hs.7510 mitogen-activated protein kinase kinase kinase 7 /FL=gb:AB009356.1 gb:NM_003188.1 </td> <td> AL121964 </td> <td> mitogen-activated protein kinase kinase kinase 7 </td> <td> MAP3K7 </td> <td> 6885 </td> <td> NM_003188 /// NM_145331 /// NM_145332 /// NM_145333 /// XM_006715553 </td> <td> 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from direct assay /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0000187 // activation of MAPK activity // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002726 // positive regulation of T cell cytokine production // inferred from mutant phenotype /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from mutant phenotype /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032743 // positive regulation of interleukin-2 production // inferred from mutant phenotype /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // non-traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050870 // positive regulation of T cell activation // inferred by curator /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // inferred from direct assay /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008385 // IkappaB kinase complex // inferred from physical interaction /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004708 // MAP kinase kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0097110 // scaffold protein binding // inferred from direct assay </td> <td> 68.65 </td> <td> 99.52 </td> <td> 5.86 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202600_s_at </td> <td> 202600_s_at </td> <td> AI824012 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI824012 /FEA=EST /DB_XREF=gi:5444683 /DB_XREF=est:wj29e06.x1 /CLONE=IMAGE:2404258 /UG=Hs.155017 nuclear receptor interacting protein 1 /FL=gb:NM_003489.1 </td> <td> AI824012 </td> <td> nuclear receptor interacting protein 1 </td> <td> NRIP1 </td> <td> 8204 </td> <td> NM_003489 /// XM_005261063 /// XM_005261065 /// XM_005261066 /// XM_006724054 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001543 // ovarian follicle rupture // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0019915 // lipid storage // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0030728 // ovulation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay </td> <td> 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from physical interaction /// 0035257 // nuclear hormone receptor binding // inferred from physical interaction /// 0035259 // glucocorticoid receptor binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // non-traceable author statement </td> <td> -118.08 </td> <td> 131.61 </td> <td> -5.86 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201891_s_at </td> <td> 201891_s_at </td> <td> NM_004048 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004048.1 /DEF=Homo sapiens beta-2-microglobulin (B2M), mRNA. /FEA=mRNA /GEN=B2M /PROD=beta-2-microglobulin /DB_XREF=gi:4757825 /UG=Hs.75415 beta-2-microglobulin /FL=gb:AB021288.1 gb:NM_004048.1 </td> <td> NM_004048 </td> <td> beta-2-microglobulin </td> <td> B2M </td> <td> 567 </td> <td> NM_004048 /// XM_005254549 /// XM_006725182 </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002237 // response to molecule of bacterial origin // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002481 // antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0042026 // protein refolding // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0031905 // early endosome lumen // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -674.20 </td> <td> 2511.10 </td> <td> -5.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 200062_s_at </td> <td> 200062_s_at </td> <td> L05095 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L05095.1 /DEF=Homo sapiens ribosomal protein L30 mRNA, complete cds. /FEA=mRNA /PROD=ribosomal protein L30 /DB_XREF=gi:388034 /UG=Hs.111222 ribosomal protein L30 /FL=gb:L05095.1 gb:NM_000989.1 </td> <td> L05095 </td> <td> ribosomal protein L30 </td> <td> RPL30 </td> <td> 6156 </td> <td> NM_000989 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -609.28 </td> <td> 3060.14 </td> <td> -5.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201023_at </td> <td> 201023_at </td> <td> NM_005642 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005642.1 /DEF=Homo sapiens TATA box binding protein (TBP)-associated factor, RNA polymerase II, F, 55kD (TAF2F), mRNA.  /FEA=mRNA /GEN=TAF2F /PROD=TATA box binding protein (TBP)-associatedfactor, RNA polymerase II, F, 55kD /DB_XREF=gi:5032148 /UG=Hs.155188 TATA box binding protein (TBP)-associated factor, RNA polymerase II, F, 55kD /FL=gb:NM_005642.1 gb:U18062.1 </td> <td> NM_005642 </td> <td> TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa </td> <td> TAF7 </td> <td> 6879 </td> <td> NM_005642 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000296 // spermine transport // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006352 // DNA-templated transcription, initiation // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0030520 // intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0035067 // negative regulation of histone acetylation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0008024 // positive transcription elongation factor complex b // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042809 // vitamin D receptor binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046966 // thyroid hormone receptor binding // inferred from physical interaction </td> <td> 140.85 </td> <td> 313.73 </td> <td> 5.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212872_s_at </td> <td> 212872_s_at </td> <td> AK023092 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK023092.1 /DEF=Homo sapiens cDNA FLJ13030 fis, clone NT2RP3001111, highly similar to Homo sapiens TRF-proximal protein mRNA.  /FEA=mRNA /DB_XREF=gi:10434851 /UG=Hs.93796 DKFZP586D2223 protein </td> <td> AK023092 </td> <td> mediator complex subunit 20 </td> <td> MED20 </td> <td> 9477 </td> <td> NM_004275 </td> <td> 0006351 // transcription, DNA-templated // non-traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement </td> <td> 0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 57.85 </td> <td> 78.08 </td> <td> 5.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201696_at </td> <td> 201696_at </td> <td> NM_005626 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005626.1 /DEF=Homo sapiens splicing factor, arginineserine-rich 4 (SFRS4), mRNA. /FEA=mRNA /GEN=SFRS4 /PROD=splicing factor, arginineserine-rich 4 /DB_XREF=gi:5032088 /UG=Hs.76122 splicing factor, arginineserine-rich 4 /FL=gb:BC002781.1 gb:L14076.1 gb:NM_005626.1 </td> <td> NM_005626 </td> <td> serine/arginine-rich splicing factor 4 </td> <td> SRSF4 </td> <td> 6429 </td> <td> NM_005626 /// XM_006710815 /// XM_006710816 </td> <td> 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 100.10 </td> <td> 230.38 </td> <td> 5.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212227_x_at </td> <td> 212227_x_at </td> <td> W67644 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W67644 /FEA=EST /DB_XREF=gi:1376515 /DB_XREF=est:zd42a07.s1 /CLONE=IMAGE:343284 /UG=Hs.150580 putative translation initiation factor </td> <td> W67644 </td> <td> eukaryotic translation initiation factor 1 </td> <td> EIF1 </td> <td> 10209 </td> <td> NM_005801 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0006950 // response to stress // non-traceable author statement /// 0009048 // dosage compensation by inactivation of X chromosome // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement </td> <td> 0003743 // translation initiation factor activity // non-traceable author statement /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -974.33 </td> <td> 2332.86 </td> <td> -5.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218259_at </td> <td> 218259_at </td> <td> NM_014048 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014048.1 /DEF=Homo sapiens KIAA1243 protein (KIAA1243), mRNA. /FEA=mRNA /GEN=KIAA1243 /PROD=NPD001 protein /DB_XREF=gi:7662513 /UG=Hs.151076 KIAA1243 protein /FL=gb:AF078853.1 gb:NM_014048.1 </td> <td> NM_014048 </td> <td> MKL/myocardin-like 2 </td> <td> MKL2 </td> <td> 57496 </td> <td> NM_014048 /// XM_005255451 /// XM_005255452 /// XM_005255453 /// XM_005255455 /// XM_005255457 /// XM_006720908 /// XM_006720909 /// XM_006720910 /// XM_006720911 /// XM_006720912 /// XM_006720913 /// XM_006720914 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0010467 // gene expression // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045844 // positive regulation of striated muscle tissue development // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048738 // cardiac muscle tissue development // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred by curator /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 70.53 </td> <td> 101.41 </td> <td> 5.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208862_s_at </td> <td> 208862_s_at </td> <td> AW073672 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW073672 /FEA=EST /DB_XREF=gi:6028670 /DB_XREF=est:xb01b04.x1 /CLONE=IMAGE:2574991 /UG=Hs.166011 catenin (cadherin-associated protein), delta 1 /FL=gb:AF062328.1 </td> <td> AW073672 </td> <td> catenin (cadherin-associated protein), delta 1 /// TMX2-CTNND1 readthrough (NMD candidate) </td> <td> CTNND1 /// TMX2-CTNND1 </td> <td> 1500 /// 100528016 </td> <td> NM_001085458 /// NM_001085459 /// NM_001085460 /// NM_001085461 /// NM_001085462 /// NM_001085463 /// NM_001085464 /// NM_001085465 /// NM_001085466 /// NM_001085467 /// NM_001085468 /// NM_001085469 /// NM_001206883 /// NM_001206884 /// NM_001206885 /// NM_001206886 /// NM_001206887 /// NM_001206888 /// NM_001206889 /// NM_001206890 /// NM_001206891 /// NM_001331 /// NR_037646 </td> <td> 0001738 // morphogenesis of a polarized epithelium // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0060690 // epithelial cell differentiation involved in salivary gland development // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // inferred from physical interaction /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation </td> <td> 113.00 </td> <td> 306.12 </td> <td> 5.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202961_s_at </td> <td> 202961_s_at </td> <td> NM_004889 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004889.1 /DEF=Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit f, isoform 2 (ATP5J2), mRNA.  /FEA=mRNA /GEN=ATP5J2 /PROD=ATP synthase, H+ transporting, mitochondrial F0complex, subunit f, isoform 2 /DB_XREF=gi:4757811 /UG=Hs.155751 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit f, isoform 2 /FL=gb:BC003678.1 gb:AF047436.1 gb:NM_004889.1 </td> <td> NM_004889 </td> <td> ARMC2 antisense RNA 1 /// ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2 </td> <td> ARMC2-AS1 /// ATP5J2 </td> <td> 9551 /// 101929716 </td> <td> NM_001003713 /// NM_001003714 /// NM_001039178 /// NM_001190353 /// NM_001190354 /// NM_004889 /// NR_104137 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015992 // proton transport // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005753 // mitochondrial proton-transporting ATP synthase complex // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator </td> <td> 185.95 </td> <td> 931.00 </td> <td> 5.85 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218718_at </td> <td> 218718_at </td> <td> NM_016205 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016205.1 /DEF=Homo sapiens platelet derived growth factor C (PDGFC), mRNA. /FEA=mRNA /GEN=PDGFC /PROD=secretory growth factor-like protein fallotein /DB_XREF=gi:9994186 /UG=Hs.43080 platelet derived growth factor C /FL=gb:AF091434.1 gb:AF244813.1 gb:AB033831.1 gb:NM_016205.1 </td> <td> NM_016205 </td> <td> platelet derived growth factor C </td> <td> PDGFC </td> <td> 56034 </td> <td> NM_016205 /// NR_036641 /// XM_006714273 </td> <td> 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> -86.65 </td> <td> 151.82 </td> <td> -5.84 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201670_s_at </td> <td> 201670_s_at </td> <td> M68956 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M68956.1 /DEF=Human myristoylated alanine-rich C-kinase substrate mRNA, complete cds.  /FEA=mRNA /GEN=MACS /PROD=myristoylated alanine-rich C-kinase substrate /DB_XREF=gi:187386 /UG=Hs.75607 myristoylated alanine-rich protein kinase C substrate (MARCKS, 80K-L) /FL=gb:NM_002356.4 gb:M68956.1 gb:D10522.1 </td> <td> M68956 </td> <td> myristoylated alanine-rich protein kinase C substrate </td> <td> MARCKS </td> <td> 4082 </td> <td> NM_002356 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0042585 // germinal vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0051015 // actin filament binding // traceable author statement </td> <td> -282.65 </td> <td> 827.73 </td> <td> -5.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 209087_x_at </td> <td> 209087_x_at </td> <td> AF089868 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF089868.1 /DEF=Homo sapiens cell surface glycoprotein P1H12 precursor, mRNA, complete cds.  /FEA=mRNA /PROD=cell surface glycoprotein P1H12 precursor /DB_XREF=gi:4336423 /UG=Hs.211579 melanoma adhesion molecule /FL=gb:AF089868.1 gb:NM_006500.1 </td> <td> AF089868 </td> <td> melanoma cell adhesion molecule </td> <td> MCAM </td> <td> 4162 </td> <td> NM_006500 /// XM_005271551 /// XM_005271552 /// XM_006718836 /// XM_006718837 /// XM_006718838 </td> <td> 0003094 // glomerular filtration // inferred from expression pattern /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0061042 // vascular wound healing // inferred from expression pattern </td> <td> 0005886 // plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 376.65 </td> <td> 1299.25 </td> <td> 5.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 212116_at </td> <td> 212116_at </td> <td> NM_006510 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_006510.1 /DEF=Homo sapiens ret finger protein (RFP), mRNA. /FEA=CDS /GEN=RFP /PROD=ret finger protein /DB_XREF=gi:5730008 /UG=Hs.142653 ret finger protein /FL=gb:AF230393.1 gb:J03407.1 gb:NM_006510.1 </td> <td> NM_006510 </td> <td> tripartite motif containing 27 </td> <td> TRIM27 </td> <td> 5987 </td> <td> NM_006510 /// NM_030950 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002820 // negative regulation of adaptive immune response // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0032720 // negative regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0032897 // negative regulation of viral transcription // inferred from direct assay /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from direct assay /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0045087 // innate immune response // inferred from direct assay /// 0045814 // negative regulation of gene expression, epigenetic // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0070206 // protein trimerization // inferred from direct assay /// 0070534 // protein K63-linked ubiquitination // inferred from mutant phenotype /// 0072643 // interferon-gamma secretion // inferred from mutant phenotype /// 0090281 // negative regulation of calcium ion import // inferred from mutant phenotype /// 1900041 // negative regulation of interleukin-2 secretion // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016605 // PML body // inferred from electronic annotation /// 0030904 // retromer complex // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // traceable author statement </td> <td> 80.10 </td> <td> 153.55 </td> <td> 5.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 216041_x_at </td> <td> 216041_x_at </td> <td> AK023348 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK023348.1 /DEF=Homo sapiens cDNA FLJ13286 fis, clone OVARC1001154, highly similar to Homo sapiens clone 24720 epithelin 1 and 2 mRNA.  /FEA=mRNA /DB_XREF=gi:10435243 /UG=Hs.180577 granulin </td> <td> AK023348 </td> <td> granulin </td> <td> GRN </td> <td> 2896 </td> <td> NM_001012479 /// NM_002087 /// XM_005257253 </td> <td> 0001835 // blastocyst hatching // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -94.85 </td> <td> 471.52 </td> <td> -5.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208635_x_at </td> <td> 208635_x_at </td> <td> BF976260 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF976260 /FEA=EST /DB_XREF=gi:12343475 /DB_XREF=est:602245139F1 /CLONE=IMAGE:4336329 /UG=Hs.158164 ATP-binding cassette, sub-family B (MDRTAP), member 2 /FL=gb:BC001849.1 </td> <td> BF976260 </td> <td> nascent polypeptide-associated complex alpha subunit </td> <td> NACA </td> <td> 4666 </td> <td> NM_001113201 /// NM_001113202 /// NM_001113203 /// NM_005594 /// NR_045277 /// XM_006719412 /// XM_006719413 /// XM_006719414 /// XM_006719415 /// XM_006719416 /// XM_006719417 /// XM_006719418 /// XM_006719419 /// XM_006719420 /// XM_006719421 </td> <td> 0003231 // cardiac ventricle development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0010664 // negative regulation of striated muscle cell apoptotic process // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0043403 // skeletal muscle tissue regeneration // inferred from sequence or structural similarity /// 0048633 // positive regulation of skeletal muscle tissue growth // inferred from sequence or structural similarity /// 0048742 // regulation of skeletal muscle fiber development // inferred from sequence or structural similarity /// 0061384 // heart trabecula morphogenesis // inferred from sequence or structural similarity /// 1901227 // negative regulation of transcription from RNA polymerase II promoter involved in heart development // inferred from sequence or structural similarity /// 1901228 // positive regulation of transcription from RNA polymerase II promoter involved in heart development // inferred from sequence or structural similarity /// 2000138 // positive regulation of cell proliferation involved in heart morphogenesis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005854 // nascent polypeptide-associated complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0017025 // TBP-class protein binding // inferred from sequence or structural similarity </td> <td> -562.35 </td> <td> 2654.68 </td> <td> -5.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208746_x_at </td> <td> 208746_x_at </td> <td> AF070655 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF070655.1 /DEF=Homo sapiens F1F0-type ATP synthase subunit g mRNA, complete cds. /FEA=mRNA /PROD=F1F0-type ATP synthase subunit g /DB_XREF=gi:4454685 /UG=Hs.107476 ATP synthase, H+ transporting, mitochondrial F1F0, subunit g /FL=gb:AF070655.1 </td> <td> AF070655 </td> <td> ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G </td> <td> ATP5L </td> <td> 10632 </td> <td> NM_006476 /// NR_033759 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator </td> <td> 184.55 </td> <td> 1090.00 </td> <td> 5.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218889_at </td> <td> 218889_at </td> <td> NM_022451 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022451.1 /DEF=Homo sapiens hypothetical protein FLJ12820 (FLJ12820), mRNA. /FEA=mRNA /GEN=FLJ12820 /PROD=hypothetical protein FLJ12820 /DB_XREF=gi:11967984 /UG=Hs.74899 hypothetical protein FLJ12820 /FL=gb:NM_022451.1 </td> <td> NM_022451 </td> <td> nucleolar complex associated 3 homolog (S. cerevisiae) </td> <td> NOC3L </td> <td> 64318 </td> <td> NM_022451 /// XM_005270048 </td> <td> 0045444 // fat cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 65.25 </td> <td> 94.67 </td> <td> 5.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 218642_s_at </td> <td> 218642_s_at </td> <td> NM_024300 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024300.1 /DEF=Homo sapiens hypothetical protein MGC2217 (MGC2217), mRNA. /FEA=mRNA /GEN=MGC2217 /PROD=hypothetical protein MGC2217 /DB_XREF=gi:13236525 /UG=Hs.323164 hypothetical protein MGC2217 /FL=gb:BC002546.1 gb:NM_024300.1 </td> <td> NM_024300 </td> <td> coiled-coil-helix-coiled-coil-helix domain containing 7 </td> <td> CHCHD7 </td> <td> 79145 </td> <td> NM_001011667 /// NM_001011668 /// NM_001011669 /// NM_001011670 /// NM_001011671 /// NM_024300 /// XR_428340 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation </td> <td>  </td> <td> 61.20 </td> <td> 61.65 </td> <td> 5.83 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213548_s_at </td> <td> 213548_s_at </td> <td> BG257762 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG257762 /FEA=EST /DB_XREF=gi:12767578 /DB_XREF=est:602377462F1 /CLONE=IMAGE:4508319 /UG=Hs.283690 hypothetical protein </td> <td> BG257762 </td> <td> CDV3 homolog (mouse) </td> <td> CDV3 </td> <td> 55573 </td> <td> NM_001134422 /// NM_001134423 /// NM_001282762 /// NM_001282763 /// NM_001282764 /// NM_001282765 /// NM_017548 /// XM_005247588 /// XM_005247589 /// XM_005247590 /// XM_005247591 /// XM_005247592 /// XM_005247594 </td> <td> 0008283 // cell proliferation // non-traceable author statement </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td>  </td> <td> -166.20 </td> <td> 193.80 </td> <td> -5.82 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201517_at </td> <td> 201517_at </td> <td> BC001255 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001255.1 /DEF=Homo sapiens, nuclear cap binding protein subunit 2, 20kD, clone MGC:4991, mRNA, complete cds.  /FEA=mRNA /PROD=nuclear cap binding protein subunit 2, 20kD /DB_XREF=gi:12654824 /UG=Hs.240770 nuclear cap binding protein subunit 2, 20kD /FL=gb:D59253.1 gb:BC001255.1 gb:NM_007362.1 </td> <td> BC001255 </td> <td> nuclear cap binding protein subunit 2, 20kDa </td> <td> NCBP2 </td> <td> 22916 </td> <td> NM_001042540 /// NM_007362 /// XM_005269313 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // inferred from direct assay /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006408 // snRNA export from nucleus // inferred from sequence or structural similarity /// 0006408 // snRNA export from nucleus // non-traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0008334 // histone mRNA metabolic process // traceable author statement /// 0008380 // RNA splicing // inferred from sequence or structural similarity /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement /// 0045292 // mRNA cis splicing, via spliceosome // inferred from direct assay /// 0046833 // positive regulation of RNA export from nucleus // inferred from sequence or structural similarity /// 0050434 // positive regulation of viral transcription // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from direct assay /// 0005846 // nuclear cap binding complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000339 // RNA cap binding // non-traceable author statement /// 0000340 // RNA 7-methylguanosine cap binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 77.05 </td> <td> 193.65 </td> <td> 5.82 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 208980_s_at </td> <td> 208980_s_at </td> <td> M26880 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M26880.1 /DEF=Human ubiquitin mRNA, complete cds. /FEA=mRNA /DB_XREF=gi:340067 /UG=Hs.183704 ubiquitin C /FL=gb:M17597.1 gb:M26880.1 </td> <td> M26880 </td> <td> ubiquitin C </td> <td> UBC </td> <td> 7316 </td> <td> NM_021009 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005978 // glycogen biosynthetic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007144 // female meiosis I // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010992 // ubiquitin homeostasis // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019082 // viral protein processing // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0021888 // hypothalamus gonadotrophin-releasing hormone neuron development // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0032479 // regulation of type I interferon production // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0060613 // fat pad development // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0071456 // cellular response to hypoxia // traceable author statement /// 0072520 // seminiferous tubule development // inferred from electronic annotation /// 0075733 // intracellular transport of virus // traceable author statement /// 0097009 // energy homeostasis // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0030666 // endocytic vesicle membrane // traceable author statement </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1334.78 </td> <td> 3002.99 </td> <td> -5.82 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213640_s_at </td> <td> 213640_s_at </td> <td> BE503425 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE503425 /FEA=EST /DB_XREF=gi:9705833 /DB_XREF=est:7a18b11.x1 /CLONE=IMAGE:3219069 /UG=Hs.102267 lysyl oxidase </td> <td> BE503425 </td> <td> lysyl oxidase </td> <td> LOX </td> <td> 4015 </td> <td> NM_001178102 /// NM_002317 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0048251 // elastic fiber assembly // inferred from electronic annotation /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0004720 // protein-lysine 6-oxidase activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016641 // oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -64.38 </td> <td> 76.66 </td> <td> -5.82 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 214794_at </td> <td> 214794_at </td> <td> BF669264 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF669264 /FEA=EST /DB_XREF=gi:11943159 /DB_XREF=est:602120534F1 /CLONE=IMAGE:4277696 /UG=Hs.5181 proliferation-associated 2G4, 38kD </td> <td> BF669264 </td> <td> proliferation-associated 2G4, 38kDa </td> <td> PA2G4 </td> <td> 5036 </td> <td> NM_006191 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0009987 // cellular process // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 93.85 </td> <td> 112.15 </td> <td> 5.81 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 213341_at </td> <td> 213341_at </td> <td> AI862658 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI862658 /FEA=EST /DB_XREF=gi:5526765 /DB_XREF=est:wj27d03.x1 /CLONE=IMAGE:2404037 /UG=Hs.47367 hypothetical protein from EUROIMAGE 783647 </td> <td> AI862658 </td> <td> fem-1 homolog c (C. elegans) </td> <td> FEM1C </td> <td> 56929 </td> <td> NM_020177 /// XM_005272035 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -52.70 </td> <td> 107.08 </td> <td> -5.80 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 214167_s_at </td> <td> 214167_s_at </td> <td> AA555113 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA555113 /FEA=EST /DB_XREF=gi:2325652 /DB_XREF=est:nj40g05.s1 /CLONE=IMAGE:995000 /UG=Hs.73742 ribosomal protein, large, P0 </td> <td> AA555113 </td> <td> ribosomal protein, large, P0 </td> <td> RPLP0 </td> <td> 6175 </td> <td> NM_001002 /// NM_053275 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -478.05 </td> <td> 2148.65 </td> <td> -5.80 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 202505_at </td> <td> 202505_at </td> <td> NM_003092 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003092.1 /DEF=Homo sapiens small nuclear ribonucleoprotein polypeptide B (SNRPB2), mRNA.  /FEA=mRNA /GEN=SNRPB2 /PROD=small nuclear ribonucleoprotein polypeptide B /DB_XREF=gi:4507122 /UG=Hs.82575 small nuclear ribonucleoprotein polypeptide B /FL=gb:M15841.1 gb:NM_003092.1 </td> <td> NM_003092 </td> <td> small nuclear ribonucleoprotein polypeptide B </td> <td> SNRPB2 </td> <td> 6629 </td> <td> NM_003092 /// NM_198220 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005686 // U2 snRNP // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017069 // snRNA binding // inferred from electronic annotation </td> <td> 254.45 </td> <td> 483.57 </td> <td> 5.80 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 217591_at </td> <td> 217591_at </td> <td> BF725121 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF725121 /FEA=EST /DB_XREF=gi:12041032 /DB_XREF=est:bx12e01.x1 /CLONE=bx12e01 /UG=Hs.272108 ESTs </td> <td> BF725121 </td> <td> SKI-like proto-oncogene </td> <td> SKIL </td> <td> 6498 </td> <td> NM_001145097 /// NM_001145098 /// NM_001248008 /// NM_005414 /// XM_005247721 /// XM_006713735 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001825 // blastocyst formation // inferred from electronic annotation /// 0002260 // lymphocyte homeostasis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // not recorded /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from sequence or structural similarity /// 0046677 // response to antibiotic // inferred from expression pattern /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from mutant phenotype /// 0070207 // protein homotrimerization // inferred from direct assay /// 0070208 // protein heterotrimerization // inferred from direct assay /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation /// 0070848 // response to growth factor // inferred from direct assay /// 1902043 // positive regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from electronic annotation /// 1902231 // positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from physical interaction </td> <td> 48.45 </td> <td> 42.80 </td> <td> 5.79 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 205100_at </td> <td> 205100_at </td> <td> NM_005110 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005110.1 /DEF=Homo sapiens glutamine-fructose-6-phosphate transaminase 2 (GFPT2), mRNA.  /FEA=mRNA /GEN=GFPT2 /PROD=glutamine-fructose-6-phosphate transaminase 2 /DB_XREF=gi:4826741 /UG=Hs.30332 glutamine-fructose-6-phosphate transaminase 2 /FL=gb:BC000012.1 gb:AB016789.1 gb:NM_005110.1 </td> <td> NM_005110 </td> <td> glutamine-fructose-6-phosphate transaminase 2 </td> <td> GFPT2 </td> <td> 9945 </td> <td> NM_005110 /// XM_006714942 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006002 // fructose 6-phosphate metabolic process // traceable author statement /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0004360 // glutamine-fructose-6-phosphate transaminase (isomerizing) activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> -53.00 </td> <td> 69.05 </td> <td> -5.79 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 36030_at </td> <td> 36030_at </td> <td> AL080214 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AL080214:Homo sapiens mRNA; cDNA DKFZp586I2223 (from clone DKFZp586I2223) /cds=(0,318) /gb=AL080214 /gi=5262704 /ug=Hs.46659 /len=1272 </td> <td> AL080214 </td> <td> intermediate filament family orphan 1 </td> <td> IFFO1 </td> <td> 25900 </td> <td> NM_001039670 /// NM_001193457 /// NM_001193459 /// NM_015438 /// NM_080730 /// NM_080731 /// NR_036467 /// XM_006718973 /// XM_006718974 /// XM_006718975 /// XM_006718976 /// XM_006718977 /// XM_006718978 /// XM_006718979 /// XM_006718980 /// XM_006718981 /// XM_006718982 </td> <td>  </td> <td> 0005882 // intermediate filament // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation </td> <td> 53.85 </td> <td> 110.75 </td> <td> 5.79 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.44 </td> </tr>
  <tr> <td> 201767_s_at </td> <td> 201767_s_at </td> <td> NM_018127 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018127.2 /DEF=Homo sapiens putative prostate cancer susceptibility protein (HPC2), mRNA.  /FEA=mRNA /GEN=HPC2 /PROD=putative prostate cancer susceptibility protein /DB_XREF=gi:11875212 /UG=Hs.12124 putative prostate cancer susceptibility protein /FL=gb:AF304370.1 gb:NM_018127.2 gb:BC001939.1 gb:BC004158.1 </td> <td> NM_018127 </td> <td> elaC ribonuclease Z 2 </td> <td> ELAC2 </td> <td> 60528 </td> <td> NM_001165962 /// NM_018127 /// NM_173717 </td> <td> 0008033 // tRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0072684 // mitochondrial tRNA 3'-trailer cleavage, endonucleolytic // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 53.30 </td> <td> 86.30 </td> <td> 5.79 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209289_at </td> <td> 209289_at </td> <td> AI700518 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI700518 /FEA=EST /DB_XREF=gi:4988418 /DB_XREF=est:we37d09.x1 /CLONE=IMAGE:2343281 /UG=Hs.33287 nuclear factor IB /FL=gb:BC001283.1 gb:U85193.1 gb:NM_005596.1 </td> <td> AI700518 </td> <td> nuclear factor I/B </td> <td> NFIB </td> <td> 4781 </td> <td> NM_001190737 /// NM_001190738 /// NM_001282787 /// NM_005596 /// XM_005251467 /// XM_005251468 /// XM_005251469 /// XM_005251470 /// XM_005251471 /// XM_006716773 /// XM_006716774 /// XM_006716775 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from sequence or structural similarity /// 0021740 // principal sensory nucleus of trigeminal nerve development // inferred from sequence or structural similarity /// 0021960 // anterior commissure morphogenesis // inferred from sequence or structural similarity /// 0030324 // lung development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060486 // Clara cell differentiation // inferred from sequence or structural similarity /// 0060509 // Type I pneumocyte differentiation // inferred from sequence or structural similarity /// 0060510 // Type II pneumocyte differentiation // inferred from sequence or structural similarity /// 0061141 // lung ciliated cell differentiation // inferred from sequence or structural similarity /// 0071679 // commissural neuron axon guidance // inferred from sequence or structural similarity /// 2000791 // negative regulation of mesenchymal cell proliferation involved in lung development // inferred from sequence or structural similarity /// 2000795 // negative regulation of epithelial cell proliferation involved in lung morphogenesis // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0044300 // cerebellar mossy fiber // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation </td> <td> 196.77 </td> <td> 433.59 </td> <td> 5.79 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202324_s_at </td> <td> 202324_s_at </td> <td> NM_022735 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022735.1 /DEF=Homo sapiens golgi resident protein GCP60 (GCP60), mRNA. /FEA=mRNA /GEN=GCP60 /PROD=golgi resident protein GCP60 /DB_XREF=gi:12232390 /UG=Hs.6831 golgi resident protein GCP60 /FL=gb:AB043587.1 gb:NM_022735.1 </td> <td> NM_022735 </td> <td> acyl-CoA binding domain containing 3 </td> <td> ACBD3 </td> <td> 64746 </td> <td> NM_022735 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 79.67 </td> <td> 150.11 </td> <td> 5.79 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200609_s_at </td> <td> 200609_s_at </td> <td> NM_017491 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017491.1 /DEF=Homo sapiens WD repeat domain 1 (WDR1), transcript variant 1, mRNA. /FEA=mRNA /GEN=WDR1 /PROD=WD repeat-containing protein 1, isoform 1 /DB_XREF=gi:9257256 /UG=Hs.85100 WD repeat domain 1 /FL=gb:BC000201.1 gb:BC002489.1 gb:AF020056.1 gb:AB010427.2 gb:NM_017491.1 </td> <td> NM_017491 </td> <td> WD repeat domain 1 </td> <td> WDR1 </td> <td> 9948 </td> <td> NM_005112 /// NM_017491 /// XM_006713988 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007605 // sensory perception of sound // traceable author statement /// 0030168 // platelet activation // traceable author statement </td> <td> 0002102 // podosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 268.45 </td> <td> 774.70 </td> <td> 5.78 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218299_at </td> <td> 218299_at </td> <td> NM_022338 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022338.1 /DEF=Homo sapiens chromosome 11 open reading frame 24 (C11ORF24), mRNA. /FEA=mRNA /GEN=C11ORF24 /PROD=chromosome 11 open reading frame 24 /DB_XREF=gi:11641238 /UG=Hs.303025 chromosome 11 open reading frame 24 /FL=gb:AF264781.1 gb:NM_022338.1 </td> <td> NM_022338 </td> <td> chromosome 11 open reading frame 24 </td> <td> C11orf24 </td> <td> 53838 </td> <td> NM_022338 /// XM_005274053 /// XM_005274054 </td> <td>  </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 49.10 </td> <td> 37.45 </td> <td> 5.78 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209825_s_at </td> <td> 209825_s_at </td> <td> BC002906 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002906.1 /DEF=Homo sapiens, Similar to uridine monophosphate kinase, clone MGC:10318, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to uridine monophosphate kinase /DB_XREF=gi:12804106 /UG=Hs.75939 uridine monophosphate kinase /FL=gb:BC002906.1 gb:AF236637.1 </td> <td> BC002906 </td> <td> microRNA 3658 /// uridine-cytidine kinase 2 </td> <td> MIR3658 /// UCK2 </td> <td> 7371 /// 100500832 </td> <td> NM_012474 /// NR_037431 </td> <td> 0006206 // pyrimidine nucleobase metabolic process // traceable author statement /// 0007631 // feeding behavior // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015937 // coenzyme A biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043097 // pyrimidine nucleoside salvage // traceable author statement /// 0044206 // UMP salvage // inferred from electronic annotation /// 0044211 // CTP salvage // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048678 // response to axon injury // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0071453 // cellular response to oxygen levels // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004140 // dephospho-CoA kinase activity // inferred from electronic annotation /// 0004849 // uridine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0019206 // nucleoside kinase activity // not recorded </td> <td> -80.20 </td> <td> 280.43 </td> <td> -5.78 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218108_at </td> <td> 218108_at </td> <td> NM_018108 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018108.1 /DEF=Homo sapiens hypothetical protein FLJ10483 (FLJ10483), mRNA. /FEA=mRNA /GEN=FLJ10483 /PROD=hypothetical protein FLJ10483 /DB_XREF=gi:8922451 /UG=Hs.6877 hypothetical protein FLJ10483 /FL=gb:NM_018108.1 </td> <td> NM_018108 </td> <td> ubiquitin protein ligase E3 component n-recognin 7 (putative) </td> <td> UBR7 </td> <td> 55148 </td> <td> NM_001100417 /// NM_175748 /// NR_038150 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td>  </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 51.58 </td> <td> 107.26 </td> <td> 5.78 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202950_at </td> <td> 202950_at </td> <td> NM_001889 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001889.1 /DEF=Homo sapiens crystallin, zeta (quinone reductase) (CRYZ), mRNA. /FEA=mRNA /GEN=CRYZ /PROD=crystallin, zeta (quinone reductase) /DB_XREF=gi:4503066 /UG=Hs.83114 crystallin, zeta (quinone reductase) /FL=gb:L13278.1 gb:S58039.1 gb:NM_001889.1 </td> <td> NM_001889 </td> <td> crystallin, zeta (quinone reductase) </td> <td> CRYZ </td> <td> 1429 </td> <td> NM_001130042 /// NM_001130043 /// NM_001134759 /// NM_001889 /// XM_005270491 </td> <td> 0007601 // visual perception // traceable author statement /// 0042178 // xenobiotic catabolic process // inferred from direct assay /// 0051289 // protein homotetramerization // inferred from physical interaction /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0003960 // NADPH:quinone reductase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from direct assay /// 0070404 // NADH binding // inferred from direct assay </td> <td> 54.40 </td> <td> 82.95 </td> <td> 5.78 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 211340_s_at </td> <td> 211340_s_at </td> <td> M28882 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M28882.1 /DEF=Human MUC18 glycoprotein mRNA, complete cds. /FEA=mRNA /PROD=MUC18 glycoprotein /DB_XREF=gi:529723 /UG=Hs.211579 melanoma adhesion molecule /FL=gb:M28882.1 </td> <td> M28882 </td> <td> melanoma cell adhesion molecule /// microRNA 6756 </td> <td> MCAM /// MIR6756 </td> <td> 4162 /// 102465453 </td> <td> NM_006500 /// NR_106814 /// XM_005271551 /// XM_005271552 /// XM_006718836 /// XM_006718837 /// XM_006718838 </td> <td> 0003094 // glomerular filtration // inferred from expression pattern /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0061042 // vascular wound healing // inferred from expression pattern </td> <td> 0005886 // plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 381.48 </td> <td> 931.79 </td> <td> 5.77 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208881_x_at </td> <td> 208881_x_at </td> <td> BC005247 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005247.1 /DEF=Homo sapiens, isopentenyl-diphosphate delta isomerase, clone MGC:12281, mRNA, complete cds.  /FEA=mRNA /PROD=isopentenyl-diphosphate delta isomerase /DB_XREF=gi:13528899 /UG=Hs.76038 isopentenyl-diphosphate delta isomerase /FL=gb:BC005247.1 </td> <td> BC005247 </td> <td> isopentenyl-diphosphate delta isomerase 1 </td> <td> IDI1 </td> <td> 3422 </td> <td> NM_004508 /// XM_005252445 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from direct assay /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0035634 // response to stilbenoid // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050992 // dimethylallyl diphosphate biosynthetic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0004452 // isopentenyl-diphosphate delta-isomerase activity // inferred from direct assay /// 0004452 // isopentenyl-diphosphate delta-isomerase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 77.42 </td> <td> 134.61 </td> <td> 5.77 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 205471_s_at </td> <td> 205471_s_at </td> <td> AW772082 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW772082 /FEA=EST /DB_XREF=gi:7704144 /DB_XREF=est:hn67b07.x1 /CLONE=IMAGE:3032917 /UG=Hs.63931 dachshund (Drosophila) homolog /FL=gb:NM_004392.1 gb:AF102546.1 </td> <td> AW772082 </td> <td> dachshund family transcription factor 1 </td> <td> DACH1 </td> <td> 1602 </td> <td> NM_004392 /// NM_080759 /// NM_080760 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001967 // suckling behavior // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0046545 // development of primary female sexual characteristics // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0051123 // RNA polymerase II transcriptional preinitiation complex assembly // inferred from electronic annotation /// 0060244 // negative regulation of cell proliferation involved in contact inhibition // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001075 // RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 62.12 </td> <td> 61.19 </td> <td> 5.77 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202619_s_at </td> <td> 202619_s_at </td> <td> AI754404 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI754404 /FEA=EST /DB_XREF=gi:5132668 /DB_XREF=est:cr24g06.x1 /CLONE=HBMSC_cr24g06 /UG=Hs.41270 procollagen-lysine, 2-oxoglutarate 5-dioxygenase (lysine hydroxylase) 2 /FL=gb:U84573.1 gb:NM_000935.1 </td> <td> AI754404 </td> <td> procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 </td> <td> PLOD2 </td> <td> 5352 </td> <td> NM_000935 /// NM_182943 /// XM_005247535 /// XM_005247536 </td> <td> 0001666 // response to hypoxia // inferred from expression pattern /// 0006464 // cellular protein modification process // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005581 // collagen trimer // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030867 // rough endoplasmic reticulum membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005506 // iron ion binding // inferred from electronic annotation /// 0008475 // procollagen-lysine 5-dioxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -450.40 </td> <td> 724.20 </td> <td> -5.76 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218147_s_at </td> <td> 218147_s_at </td> <td> NM_018446 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018446.1 /DEF=Homo sapiens AD-017 protein (LOC55830), mRNA. /FEA=mRNA /GEN=LOC55830 /PROD=AD-017 protein /DB_XREF=gi:8923854 /UG=Hs.283737 AD-017 protein /FL=gb:BC001418.1 gb:AF157318.1 gb:NM_018446.1 </td> <td> NM_018446 </td> <td> glycosyltransferase 8 domain containing 1 </td> <td> GLT8D1 </td> <td> 55830 </td> <td> NM_001010983 /// NM_001278280 /// NM_001278281 /// NM_018446 /// NM_152932 /// XM_006713260 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> 45.68 </td> <td> 66.09 </td> <td> 5.76 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201022_s_at </td> <td> 201022_s_at </td> <td> NM_006870 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006870.2 /DEF=Homo sapiens destrin (actin depolymerizing factor) (ADF), mRNA. /FEA=mRNA /GEN=ADF /PROD=destrin (actin depolymerizing factor) /DB_XREF=gi:6466447 /UG=Hs.82306 destrin (actin depolymerizing factor) /FL=gb:NM_006870.2 </td> <td> NM_006870 </td> <td> destrin (actin depolymerizing factor) </td> <td> DSTN </td> <td> 11034 </td> <td> NM_001011546 /// NM_006870 </td> <td> 0000910 // cytokinesis // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // traceable author statement /// 0030042 // actin filament depolymerization // inferred from electronic annotation /// 0030836 // positive regulation of actin filament depolymerization // inferred from electronic annotation /// 0051014 // actin filament severing // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation </td> <td> -137.58 </td> <td> 1398.24 </td> <td> -5.76 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209860_s_at </td> <td> 209860_s_at </td> <td> J04543 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:J04543.1 /DEF=Human synexin mRNA, complete cds. /FEA=mRNA /DB_XREF=gi:338243 /UG=Hs.78637 annexin A7 /FL=gb:BC002632.1 gb:J04543.1 gb:NM_001156.2 </td> <td> J04543 </td> <td> annexin A7 </td> <td> ANXA7 </td> <td> 310 </td> <td> NM_001156 /// NM_004034 /// XM_005269738 /// XM_005269739 </td> <td> 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006914 // autophagy // inferred from mutant phenotype /// 0007599 // hemostasis // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009651 // response to salt stress // inferred from electronic annotation /// 0009992 // cellular water homeostasis // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from mutant phenotype /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0035176 // social behavior // inferred from expression pattern /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0061025 // membrane fusion // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0031982 // vesicle // inferred from electronic annotation /// 0042584 // chromaffin granule membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005178 // integrin binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> -112.97 </td> <td> 385.96 </td> <td> -5.75 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209175_at </td> <td> 209175_at </td> <td> AK001135 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001135.1 /DEF=Homo sapiens cDNA FLJ10273 fis, clone HEMBB1001137, highly similar to Homo sapiens mRNA for putative phospholipase.  /FEA=mRNA /DB_XREF=gi:7022202 /UG=Hs.300208 Sec23-interacting protein p125 /FL=gb:BC002540.1 gb:AB019435.1 gb:NM_007190.1 </td> <td> AK001135 </td> <td> SEC23 interacting protein </td> <td> SEC23IP </td> <td> 11196 </td> <td> NM_007190 /// NR_037771 /// XM_005269469 /// XM_005269470 /// XR_246061 </td> <td> 0006886 // intracellular protein transport // traceable author statement /// 0007030 // Golgi organization // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 66.97 </td> <td> 123.84 </td> <td> 5.75 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 205672_at </td> <td> 205672_at </td> <td> NM_000380 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000380.1 /DEF=Homo sapiens xeroderma pigmentosum, complementation group A (XPA), mRNA.  /FEA=mRNA /GEN=XPA /PROD=xeroderma pigmentosum, complementation group A /DB_XREF=gi:4507936 /UG=Hs.192803 xeroderma pigmentosum, complementation group A /FL=gb:NM_000380.1 </td> <td> NM_000380 </td> <td> xeroderma pigmentosum, complementation group A </td> <td> XPA </td> <td> 7507 </td> <td> NM_000380 /// NR_027302 /// XM_006717278 /// XR_428536 </td> <td> 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005662 // DNA replication factor A complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0045171 // intercellular bridge // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 58.40 </td> <td> 56.27 </td> <td> 5.74 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 210654_at </td> <td> 210654_at </td> <td> AF021233 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF021233.1 /DEF=Homo sapiens TRAIL-R4-B (TRAIL-R4) mRNA, complete cds. /FEA=mRNA /GEN=TRAIL-R4 /PROD=TRAIL-R4-B /DB_XREF=gi:3452184 /UG=Hs.129844 tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain /FL=gb:AF023849.1 gb:AF021232.1 gb:AF021233.1 gb:AF029761.1 gb:NM_003840.1 </td> <td> AF021233 </td> <td> tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain </td> <td> TNFRSF10D </td> <td> 8793 </td> <td> NM_003840 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0045569 // TRAIL binding // inferred from electronic annotation </td> <td> -87.42 </td> <td> 99.04 </td> <td> -5.74 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201102_s_at </td> <td> 201102_s_at </td> <td> NM_002626 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002626.1 /DEF=Homo sapiens phosphofructokinase, liver (PFKL), mRNA. /FEA=mRNA /GEN=PFKL /PROD=phosphofructokinase, liver /DB_XREF=gi:4505746 /UG=Hs.155455 phosphofructokinase, liver /FL=gb:BC004920.1 gb:X15573.1 gb:NM_002626.1 </td> <td> NM_002626 </td> <td> phosphofructokinase, liver </td> <td> PFKL </td> <td> 5211 </td> <td> NM_001002021 /// NM_002626 /// NR_024108 /// XM_005261135 /// XM_005261136 /// XM_005261137 /// XM_006724011 /// XM_006724012 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006002 // fructose 6-phosphate metabolic process // inferred from direct assay /// 0006002 // fructose 6-phosphate metabolic process // inferred from mutant phenotype /// 0006006 // glucose metabolic process // traceable author statement /// 0006096 // glycolytic process // inferred from direct assay /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009749 // response to glucose // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030388 // fructose 1,6-bisphosphate metabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0046835 // carbohydrate phosphorylation // inferred from direct assay /// 0046835 // carbohydrate phosphorylation // inferred from electronic annotation /// 0046835 // carbohydrate phosphorylation // inferred from mutant phenotype /// 0051259 // protein oligomerization // inferred from direct assay /// 0051289 // protein homotetramerization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005945 // 6-phosphofructokinase complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003872 // 6-phosphofructokinase activity // inferred from direct assay /// 0003872 // 6-phosphofructokinase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048029 // monosaccharide binding // inferred from electronic annotation /// 0070061 // fructose binding // inferred from direct assay /// 0070095 // fructose-6-phosphate binding // inferred from direct assay </td> <td> -65.75 </td> <td> 169.45 </td> <td> -5.73 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 221203_s_at </td> <td> 221203_s_at </td> <td> NM_018023 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018023.2 /DEF=Homo sapiens hypothetical protein FLJ10201 (FLJ10201), mRNA. /FEA=mRNA /GEN=FLJ10201 /PROD=hypothetical protein FLJ10201 /DB_XREF=gi:13492976 /UG=Hs.318127 hypothetical protein FLJ10201 /FL=gb:NM_018023.2 </td> <td> NM_018023 </td> <td> YEATS domain containing 2 </td> <td> YEATS2 </td> <td> 55689 </td> <td> NM_018023 /// XM_005247597 /// XM_005247598 /// XM_006713688 /// XR_427369 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006325 // chromatin organization // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0072686 // mitotic spindle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0017025 // TBP-class protein binding // inferred from physical interaction </td> <td> -65.00 </td> <td> 143.43 </td> <td> -5.73 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201175_at </td> <td> 201175_at </td> <td> NM_015959 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015959.1 /DEF=Homo sapiens CGI-31 protein (LOC51075), mRNA. /FEA=mRNA /GEN=LOC51075 /PROD=CGI-31 protein /DB_XREF=gi:7705725 /UG=Hs.279861 CGI-31 protein /FL=gb:AF059753.1 gb:BC000666.1 gb:AF132965.1 gb:NM_015959.1 </td> <td> NM_015959 </td> <td> thioredoxin-related transmembrane protein 2 </td> <td> TMX2 </td> <td> 51075 </td> <td> NM_001144012 /// NM_015959 /// NR_026593 /// NR_037645 </td> <td> 0045454 // cell redox homeostasis // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 71.18 </td> <td> 266.59 </td> <td> 5.73 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203243_s_at </td> <td> 203243_s_at </td> <td> NM_006457 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006457.1 /DEF=Homo sapiens LIM protein (similar to rat protein kinase C-binding enigma) (LIM), mRNA.  /FEA=mRNA /GEN=LIM /PROD=LIM protein (similar to rat protein kinaseC-binding enigma) /DB_XREF=gi:5453713 /UG=Hs.154103 LIM protein (similar to rat protein kinase C-binding enigma) /FL=gb:AF061258.1 gb:NM_006457.1 </td> <td> NM_006457 </td> <td> PDZ and LIM domain 5 </td> <td> PDLIM5 </td> <td> 10611 </td> <td> NM_001011513 /// NM_001011515 /// NM_001011516 /// NM_001256425 /// NM_001256426 /// NM_001256427 /// NM_001256428 /// NM_001256429 /// NM_006457 /// NR_046186 /// XM_005262693 /// XM_005262695 /// XM_005262696 /// XM_005262698 /// XM_006714066 /// XM_006714067 /// XM_006714068 /// XM_006714069 /// XM_006714070 </td> <td> 0051963 // regulation of synapse assembly // inferred from sequence or structural similarity /// 0061001 // regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042805 // actinin binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation </td> <td> 241.65 </td> <td> 598.62 </td> <td> 5.73 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200737_at </td> <td> 200737_at </td> <td> NM_000291 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000291.1 /DEF=Homo sapiens phosphoglycerate kinase 1 (PGK1), mRNA. /FEA=mRNA /GEN=PGK1 /PROD=phosphoglycerate kinase 1 /DB_XREF=gi:4505762 /UG=Hs.78771 phosphoglycerate kinase 1 /FL=gb:NM_000291.1 </td> <td> NM_000291 </td> <td> phosphoglycerate kinase 1 </td> <td> PGK1 </td> <td> 5230 </td> <td> NM_000291 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // not recorded /// 0004618 // phosphoglycerate kinase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -93.20 </td> <td> 412.90 </td> <td> -5.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 213571_s_at </td> <td> 213571_s_at </td> <td> BF516289 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF516289 /FEA=EST /DB_XREF=gi:11601468 /DB_XREF=est:UI-H-BW1-anz-d-07-0-UI.s1 /CLONE=IMAGE:3083964 /UG=Hs.19122 eukaryotic translation initiation factor 4E-like 3 </td> <td> BF516289 </td> <td> eukaryotic translation initiation factor 4E family member 2 </td> <td> EIF4E2 </td> <td> 9470 </td> <td> NM_001276336 /// NM_001276337 /// NM_001282958 /// NM_004846 /// XM_005246975 /// XR_427124 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019221 // cytokine-mediated signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from direct assay </td> <td> 0000339 // RNA cap binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 65.95 </td> <td> 216.93 </td> <td> 5.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202902_s_at </td> <td> 202902_s_at </td> <td> NM_004079 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004079.1 /DEF=Homo sapiens cathepsin S (CTSS), mRNA. /FEA=mRNA /GEN=CTSS /PROD=cathepsin S /DB_XREF=gi:4758097 /UG=Hs.181301 cathepsin S /FL=gb:BC002642.1 gb:M86553.1 gb:NM_004079.1 gb:M90696.1 </td> <td> NM_004079 </td> <td> cathepsin S </td> <td> CTSS </td> <td> 1520 </td> <td> NM_001199739 /// NM_004079 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002250 // adaptive immune response // inferred from expression pattern /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0006955 // immune response // traceable author statement /// 0019882 // antigen processing and presentation // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from direct assay /// 0034769 // basement membrane disassembly // inferred from direct assay /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from expression pattern </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0036021 // endolysosome lumen // traceable author statement /// 0043202 // lysosomal lumen // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0001968 // fibronectin binding // inferred from physical interaction /// 0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0005518 // collagen binding // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043236 // laminin binding // inferred from direct assay /// 0043394 // proteoglycan binding // inferred from physical interaction </td> <td> -91.03 </td> <td> 86.11 </td> <td> -5.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 221654_s_at </td> <td> 221654_s_at </td> <td> AF077040 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF077040.1 /DEF=Homo sapiens SIH003 mRNA, complete cds. /FEA=mRNA /PROD=SIH003 /DB_XREF=gi:4689127 /UG=Hs.251636 ubiquitin specific protease 3 /FL=gb:AF077040.1 </td> <td> AF077040 </td> <td> ubiquitin specific peptidase 3 </td> <td> USP3 </td> <td> 9960 </td> <td> NM_001256702 /// NM_006537 /// NR_046341 /// NR_046342 /// XM_005254816 /// XM_006720789 /// XM_006720790 /// XM_006720791 /// XM_006720792 </td> <td> 0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016578 // histone deubiquitination // inferred from direct assay /// 0031647 // regulation of protein stability // inferred from direct assay </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation /// 0042393 // histone binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -84.70 </td> <td> 212.97 </td> <td> -5.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209633_at </td> <td> 209633_at </td> <td> AL389975 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL389975.1 /DEF=Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 2004632. /FEA=mRNA /PROD=protein phosphatase 2A 72 kDa regulatorysubunit /DB_XREF=gi:9367827 /UG=Hs.28219 protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 72), alpha isoform and (PR 130), beta isoform /FL=gb:L07590.1 </td> <td> AL389975 </td> <td> protein phosphatase 2, regulatory subunit B'', alpha </td> <td> PPP2R3A </td> <td> 5523 </td> <td> NM_001190447 /// NM_002718 /// NM_181897 /// XM_006713686 </td> <td> 0001754 // eye photoreceptor cell differentiation // inferred from genetic interaction /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0007525 // somatic muscle development // inferred from genetic interaction /// 0045732 // positive regulation of protein catabolic process // inferred from mutant phenotype /// 0050790 // regulation of catalytic activity // traceable author statement /// 0061053 // somite development // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from genetic interaction /// 0090244 // Wnt signaling pathway involved in somitogenesis // inferred by curator /// 0090249 // regulation of cell motility involved in somitogenic axis elongation // inferred from genetic interaction /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from direct assay </td> <td> 0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // inferred from sequence or structural similarity </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 61.15 </td> <td> 88.58 </td> <td> 5.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202690_s_at </td> <td> 202690_s_at </td> <td> BC001721 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001721.1 /DEF=Homo sapiens, small nuclear ribonucleoprotein D1 polypeptide (16kD), clone MGC:2222, mRNA, complete cds.  /FEA=mRNA /PROD=small nuclear ribonucleoprotein D1 polypeptide(16kD) /DB_XREF=gi:12804598 /UG=Hs.86948 small nuclear ribonucleoprotein D1 polypeptide (16kD) /FL=gb:BC001721.1 gb:J03798.1 gb:NM_006938.1 </td> <td> BC001721 </td> <td> small nuclear ribonucleoprotein D1 polypeptide 16kDa </td> <td> SNRPD1 </td> <td> 6632 </td> <td> NM_001291916 /// NM_006938 </td> <td> 0000245 // spliceosomal complex assembly // traceable author statement /// 0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005685 // U1 snRNP // inferred from direct assay /// 0005687 // U4 snRNP // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement /// 0034709 // methylosome // inferred from direct assay /// 0034715 // pICln-Sm protein complex // inferred from direct assay /// 0034719 // SMN-Sm protein complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 141.50 </td> <td> 354.32 </td> <td> 5.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202934_at </td> <td> 202934_at </td> <td> AI761561 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI761561 /FEA=EST /DB_XREF=gi:5177228 /DB_XREF=est:wi61h11.x1 /CLONE=IMAGE:2394789 /UG=Hs.198427 hexokinase 2 /FL=gb:NM_000189.1 gb:AF148513.1 </td> <td> AI761561 </td> <td> hexokinase 2 </td> <td> HK2 </td> <td> 3099 </td> <td> NM_000189 /// XM_005264280 </td> <td> 0001678 // cellular glucose homeostasis // not recorded /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006096 // glycolytic process // not recorded /// 0007595 // lactation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008637 // apoptotic mitochondrial changes // inferred from direct assay /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019318 // hexose metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046324 // regulation of glucose import // inferred from electronic annotation /// 0046835 // carbohydrate phosphorylation // inferred from electronic annotation /// 0051156 // glucose 6-phosphate metabolic process // not recorded /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004340 // glucokinase activity // not recorded /// 0004396 // hexokinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005536 // glucose binding // inferred from electronic annotation /// 0008865 // fructokinase activity // not recorded /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0019158 // mannokinase activity // not recorded </td> <td> -157.52 </td> <td> 190.51 </td> <td> -5.72 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 213357_at </td> <td> 213357_at </td> <td> AV701318 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV701318 /FEA=EST /DB_XREF=gi:10717648 /DB_XREF=est:AV701318 /CLONE=ADAAGD10 /UG=Hs.278626 ArgAbl-interacting protein ArgBP2 </td> <td> AV701318 </td> <td> general transcription factor IIH, polypeptide 5 </td> <td> GTF2H5 </td> <td> 404672 </td> <td> NM_207118 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation </td> <td> 0000439 // core TFIIH complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td>  </td> <td> 55.38 </td> <td> 183.51 </td> <td> 5.71 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 204168_at </td> <td> 204168_at </td> <td> NM_002413 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002413.1 /DEF=Homo sapiens microsomal glutathione S-transferase 2 (MGST2), mRNA. /FEA=mRNA /GEN=MGST2 /PROD=microsomal glutathione S-transferase 2 /DB_XREF=gi:4505180 /UG=Hs.81874 microsomal glutathione S-transferase 2 /FL=gb:U77604.1 gb:NM_002413.1 </td> <td> NM_002413 </td> <td> microsomal glutathione S-transferase 2 </td> <td> MGST2 </td> <td> 4258 </td> <td> NM_001204366 /// NM_001204367 /// NM_001204368 /// NM_002413 /// XM_006714221 </td> <td> 0006691 // leukotriene metabolic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0019370 // leukotriene biosynthetic process // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // not recorded /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 1901687 // glutathione derivative biosynthetic process // traceable author statement </td> <td> 0005635 // nuclear envelope // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0004364 // glutathione transferase activity // inferred from direct assay /// 0004464 // leukotriene-C4 synthase activity // inferred from direct assay /// 0004602 // glutathione peroxidase activity // not recorded /// 0008047 // enzyme activator activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 110.67 </td> <td> 192.99 </td> <td> 5.71 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 64418_at </td> <td> 64418_at </td> <td> AI472320 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI472320:tj87c02.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2148482 /clone_end=3' /gb=AI472320 /gi=4334410 /ug=Hs.48504 /len=548 </td> <td> AI472320 </td> <td> synergin, gamma </td> <td> SYNRG </td> <td> 11276 </td> <td> NM_001163544 /// NM_001163545 /// NM_001163546 /// NM_001163547 /// NM_007247 /// NM_080550 /// NM_198882 /// XM_005256980 /// XM_005256981 /// XM_005256982 /// XM_005256983 /// XM_005256985 /// XM_005256986 /// XM_005256988 /// XM_006721652 /// XM_006721653 /// XM_006721654 /// XM_006721655 /// XM_006725301 /// XM_006725302 /// XM_006725303 /// XM_006725304 /// XM_006725305 /// XM_006725306 /// XM_006725307 /// XM_006725308 /// XM_006725309 /// XM_006725310 /// XM_006725311 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030121 // AP-1 adaptor complex // traceable author statement </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation </td> <td> 50.03 </td> <td> 63.39 </td> <td> 5.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 221526_x_at </td> <td> 221526_x_at </td> <td> AW452651 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW452651 /FEA=EST /DB_XREF=gi:6993427 /DB_XREF=est:UI-H-BI3-alu-g-02-0-UI.s1 /CLONE=IMAGE:3068738 /UG=Hs.72249 three-PDZ containing protein similar to C. elegans PAR3 (partitioning defect) /FL=gb:AF196185.1 </td> <td> AW452651 </td> <td> par-3 family cell polarity regulator </td> <td> PARD3 </td> <td> 56288 </td> <td> NM_001184785 /// NM_001184786 /// NM_001184787 /// NM_001184788 /// NM_001184789 /// NM_001184790 /// NM_001184791 /// NM_001184792 /// NM_001184793 /// NM_001184794 /// NM_019619 /// XM_005252528 /// XM_005252530 /// XM_005252531 /// XM_005252532 /// XM_005252534 /// XM_005252535 /// XM_005252536 /// XM_006717471 /// XM_006717472 /// XM_006717473 /// XM_006717474 /// XM_006717475 /// XM_006717476 /// XM_006717477 /// XM_006717478 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0003383 // apical constriction // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006612 // protein targeting to membrane // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007409 // axonogenesis // traceable author statement /// 0008356 // asymmetric cell division // traceable author statement /// 0010801 // negative regulation of peptidyl-threonine phosphorylation // inferred from sequence or structural similarity /// 0022011 // myelination in peripheral nervous system // inferred from sequence or structural similarity /// 0031643 // positive regulation of myelination // inferred from sequence or structural similarity /// 0032970 // regulation of actin filament-based process // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0044319 // wound healing, spreading of cells // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from electronic annotation /// 0060341 // regulation of cellular localization // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from sequence or structural similarity /// 0070830 // tight junction assembly // traceable author statement /// 0090162 // establishment of epithelial cell polarity // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005938 // cell cortex // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // traceable author statement /// 0033269 // internode region of axon // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044295 // axonal growth cone // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation </td> <td> 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0008289 // lipid binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from sequence or structural similarity </td> <td> -61.22 </td> <td> 92.74 </td> <td> -5.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201092_at </td> <td> 201092_at </td> <td> NM_002893 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002893.2 /DEF=Homo sapiens retinoblastoma-binding protein 7 (RBBP7), mRNA. /FEA=mRNA /GEN=RBBP7 /PROD=retinoblastoma-binding protein 7 /DB_XREF=gi:13259504 /UG=Hs.31314 retinoblastoma-binding protein 7 /FL=gb:U35143.1 gb:NM_002893.2 </td> <td> NM_002893 </td> <td> retinoblastoma binding protein 7 </td> <td> RBBP7 </td> <td> 5931 </td> <td> NM_001198719 /// NM_002893 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006325 // chromatin organization // traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0034080 // centromere-specific nucleosome assembly // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0070370 // cellular heat acclimation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0016581 // NuRD complex // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 96.97 </td> <td> 450.49 </td> <td> 5.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 211730_s_at </td> <td> 211730_s_at </td> <td> BC005903 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005903.1 /DEF=Homo sapiens, polymerase (RNA) II (DNA directed) polypeptide L (7.6kD), clone MGC:14494, mRNA, complete cds.  /FEA=mRNA /PROD=polymerase (RNA) II (DNA directed) polypeptide L(7.6kD) /DB_XREF=gi:13543491 /FL=gb:BC005903.1 </td> <td> BC005903 </td> <td> polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa </td> <td> POLR2L </td> <td> 5441 </td> <td> NM_021128 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006356 // regulation of transcription from RNA polymerase I promoter // traceable author statement /// 0006360 // transcription from RNA polymerase I promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0005666 // DNA-directed RNA polymerase III complex // not recorded /// 0005736 // DNA-directed RNA polymerase I complex // not recorded /// 0005829 // cytosol // traceable author statement </td> <td> 0001054 // RNA polymerase I activity // not recorded /// 0001055 // RNA polymerase II activity // not recorded /// 0001056 // RNA polymerase III activity // not recorded /// 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement /// 0008270 // zinc ion binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 339.57 </td> <td> 893.29 </td> <td> 5.70 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212115_at </td> <td> 212115_at </td> <td> AK023154 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK023154.1 /DEF=Homo sapiens cDNA FLJ13092 fis, clone NT2RP3002147. /FEA=mRNA /DB_XREF=gi:10434948 /UG=Hs.172035 hypothetical protein similar to mouse  HN1 (Hematological and Neurological expressed sequence 1) </td> <td> AK023154 </td> <td> hematological and neurological expressed 1-like </td> <td> HN1L </td> <td> 90861 </td> <td> NM_144570 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td>  </td> <td> 136.35 </td> <td> 226.43 </td> <td> 5.69 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201846_s_at </td> <td> 201846_s_at </td> <td> NM_012234 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012234.1 /DEF=Homo sapiens RING1 and YY1 binding protein (RYBP), mRNA. /FEA=mRNA /GEN=RYBP /PROD=RING1 and YY1 binding protein /DB_XREF=gi:6912639 /UG=Hs.7910 RING1 and YY1 binding protein /FL=gb:AF179286.1 gb:AB029551.1 gb:NM_012234.1 </td> <td> NM_012234 </td> <td> RING1 and YY1 binding protein </td> <td> RYBP </td> <td> 23429 </td> <td> NM_012234 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0035518 // histone H2A monoubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -85.28 </td> <td> 140.51 </td> <td> -5.69 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208804_s_at </td> <td> 208804_s_at </td> <td> AL031681 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL031681 /DEF=Human DNA sequence from clone 862K6 on chromosome 20q12-13.13. Contains the gene for a protein similar to Drosophila lethal (3) malignant brain tumor (l(3)mbt) protein, the SFRS6 gene for arginineserine-rich splicing factor 6 (SRP55), a 4E-BP2 (4... /FEA=mRNA_3 /DB_XREF=gi:10198606 /UG=Hs.6891 splicing factor, arginineserine-rich 6 /FL=gb:U30828.1 </td> <td> AL031681 </td> <td> serine/arginine-rich splicing factor 6 </td> <td> SRSF6 </td> <td> 6431 </td> <td> NM_006275 /// NR_034009 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from mutant phenotype /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // inferred from mutant phenotype /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010837 // regulation of keratinocyte proliferation // inferred from mutant phenotype /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0045617 // negative regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // inferred from direct assay /// 0060548 // negative regulation of cell death // inferred from direct assay /// 0061041 // regulation of wound healing // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0036002 // pre-mRNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 225.92 </td> <td> 296.44 </td> <td> 5.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208581_x_at </td> <td> 208581_x_at </td> <td> NM_005952 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005952.1 /DEF=Homo sapiens metallothionein 1X (MT1X), mRNA. /FEA=CDS /GEN=MT1X /PROD=metallothionein 1X /DB_XREF=gi:10835231 /UG=Hs.278462 metallothionein 1X /FL=gb:NM_005952.1 </td> <td> NM_005952 </td> <td> metallothionein 1X </td> <td> MT1X </td> <td> 4501 </td> <td> NM_005952 </td> <td> 0010038 // response to metal ion // traceable author statement /// 0036018 // cellular response to erythropoietin // inferred from expression pattern /// 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0071276 // cellular response to cadmium ion // inferred from expression pattern /// 0071294 // cellular response to zinc ion // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // traceable author statement </td> <td> -2129.38 </td> <td> 3716.66 </td> <td> -5.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 217806_s_at </td> <td> 217806_s_at </td> <td> NM_015584 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015584.1 /DEF=Homo sapiens DKFZP586F1524 protein (DKFZP586F1524), mRNA. /FEA=mRNA /GEN=DKFZP586F1524 /PROD=DKFZP586F1524 protein /DB_XREF=gi:7661671 /UG=Hs.241543 DKFZP586F1524 protein /FL=gb:BC000655.1 gb:AF077203.1 gb:NM_015584.1 </td> <td> NM_015584 </td> <td> polymerase (DNA-directed), delta interacting protein 2 </td> <td> POLDIP2 </td> <td> 26073 </td> <td> NM_001290145 /// NM_015584 </td> <td> 0070584 // mitochondrion morphogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation </td> <td> 144.35 </td> <td> 226.70 </td> <td> 5.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 211942_x_at </td> <td> 211942_x_at </td> <td> BF979419 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF979419 /FEA=EST /DB_XREF=gi:12346634 /DB_XREF=est:602288246F1 /CLONE=IMAGE:4373914 /UG=Hs.119122 ribosomal protein L13a </td> <td> BF979419 </td> <td> ribosomal protein L13a /// ribosomal protein L13a pseudogene 5 /// ribosomal protein L13a pseudogene 6 /// small nucleolar RNA, C/D box 32A /// small nucleolar RNA, C/D box 33 /// small nucleolar RNA, C/D box 34 /// small nucleolar RNA, C/D box 35A </td> <td> RPL13A /// RPL13AP5 /// RPL13AP6 /// SNORD32A /// SNORD33 /// SNORD34 /// SNORD35A </td> <td> 23521 /// 26816 /// 26817 /// 26818 /// 26819 /// 644511 /// 728658 </td> <td> NM_001270491 /// NM_012423 /// NR_000018 /// NR_000019 /// NR_000020 /// NR_000021 /// NR_026712 /// NR_026715 /// NR_073024 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071346 // cellular response to interferon-gamma // inferred from direct assay /// 1901194 // negative regulation of formation of translation preinitiation complex // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015934 // large ribosomal subunit // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -591.40 </td> <td> 2390.57 </td> <td> -5.68 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 217301_x_at </td> <td> 217301_x_at </td> <td> X71810 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X71810.1 /DEF=H.sapiens IEF 9306 mRNA. /FEA=mRNA /GEN=9306 /PROD=IEF SSP 9306 /DB_XREF=gi:297905 /UG=Hs.16003 retinoblastoma-binding protein 4 </td> <td> X71810 </td> <td> retinoblastoma binding protein 4 </td> <td> RBBP4 </td> <td> 5928 </td> <td> NM_001135255 /// NM_001135256 /// NM_005610 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006334 // nucleosome assembly // traceable author statement /// 0006335 // DNA replication-dependent nucleosome assembly // inferred from direct assay /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0031497 // chromatin assembly // inferred from direct assay /// 0034080 // centromere-specific nucleosome assembly // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0051726 // regulation of cell cycle // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0016580 // Sin3 complex // non-traceable author statement /// 0016581 // NuRD complex // inferred from direct assay /// 0016581 // NuRD complex // non-traceable author statement /// 0016589 // NURF complex // inferred from direct assay /// 0033186 // CAF-1 complex // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042393 // histone binding // non-traceable author statement /// 0042826 // histone deacetylase binding // inferred from physical interaction </td> <td> 153.70 </td> <td> 299.88 </td> <td> 5.67 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 219582_at </td> <td> 219582_at </td> <td> NM_024576 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024576.1 /DEF=Homo sapiens hypothetical protein FLJ21079 (FLJ21079), mRNA. /FEA=mRNA /GEN=FLJ21079 /PROD=hypothetical protein FLJ21079 /DB_XREF=gi:13375751 /UG=Hs.16512 hypothetical protein FLJ21079 /FL=gb:NM_024576.1 </td> <td> NM_024576 </td> <td> opioid growth factor receptor-like 1 </td> <td> OGFRL1 </td> <td> 79627 </td> <td> NM_024576 /// XM_005248765 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // inferred from electronic annotation </td> <td> -101.45 </td> <td> 104.35 </td> <td> -5.67 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 205990_s_at </td> <td> 205990_s_at </td> <td> NM_003392 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003392.1 /DEF=Homo sapiens wingless-type MMTV integration site family, member 5A (WNT5A), mRNA.  /FEA=mRNA /GEN=WNT5A /PROD=wingless-type MMTV integration site family,member 5A /DB_XREF=gi:4507928 /UG=Hs.152213 wingless-type MMTV integration site family, member 5A /FL=gb:L20861.1 gb:NM_003392.1 </td> <td> NM_003392 </td> <td> wingless-type MMTV integration site family, member 5A </td> <td> WNT5A </td> <td> 7474 </td> <td> NM_001256105 /// NM_003392 /// XM_006713324 </td> <td> 0000187 // activation of MAPK activity // inferred from direct assay /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001736 // establishment of planar polarity // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from expression pattern /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001947 // heart looping // inferred from electronic annotation /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002088 // lens development in camera-type eye // inferred from sequence or structural similarity /// 0002741 // positive regulation of cytokine secretion involved in immune response // inferred from mutant phenotype /// 0003323 // type B pancreatic cell development // inferred from electronic annotation /// 0003344 // pericardium morphogenesis // inferred from electronic annotation /// 0003401 // axis elongation // inferred from electronic annotation /// 0003408 // optic cup formation involved in camera-type eye development // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007223 // Wnt signaling pathway, calcium modulating pathway // inferred from direct assay /// 0007223 // Wnt signaling pathway, calcium modulating pathway // inferred from mutant phenotype /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from direct assay /// 0007257 // activation of JUN kinase activity // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007442 // hindgut morphogenesis // inferred from electronic annotation /// 0007494 // midgut development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from expression pattern /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from expression pattern /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0010820 // positive regulation of T cell chemotaxis // inferred from mutant phenotype /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0016055 // Wnt signaling pathway // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0021891 // olfactory bulb interneuron development // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // not recorded /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030216 // keratinocyte differentiation // inferred from expression pattern /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0030825 // positive regulation of cGMP metabolic process // inferred from direct assay /// 0032148 // activation of protein kinase B activity // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from mutant phenotype /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0036342 // post-anal tail morphogenesis // inferred from electronic annotation /// 0038031 // non-canonical Wnt signaling pathway via JNK cascade // inferred from electronic annotation /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0042060 // wound healing // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0045080 // positive regulation of chemokine biosynthetic process // inferred from mutant phenotype /// 0045165 // cell fate commitment // not recorded /// 0045599 // negative regulation of fat cell differentiation // inferred from mutant phenotype /// 0045732 // positive regulation of protein catabolic process // inferred from genetic interaction /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045778 // positive regulation of ossification // inferred from mutant phenotype /// 0045836 // positive regulation of meiosis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046546 // development of primary male sexual characteristics // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from mutant phenotype /// 0048806 // genitalia development // inferred from mutant phenotype /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048850 // hypophysis morphogenesis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from mutant phenotype /// 0050729 // positive regulation of inflammatory response // inferred from mutant phenotype /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051216 // cartilage development // inferred from electronic annotation /// 0051964 // negative regulation of synapse assembly // inferred from electronic annotation /// 0060021 // palate development // inferred from mutant phenotype /// 0060026 // convergent extension // inferred from electronic annotation /// 0060029 // convergent extension involved in organogenesis // inferred from electronic annotation /// 0060065 // uterus development // inferred from electronic annotation /// 0060067 // cervix development // inferred from electronic annotation /// 0060068 // vagina development // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway // inferred from electronic annotation /// 0060071 // Wnt signaling pathway, planar cell polarity pathway // inferred from electronic annotation /// 0060157 // urinary bladder development // inferred from electronic annotation /// 0060324 // face development // inferred from mutant phenotype /// 0060340 // positive regulation of type I interferon-mediated signaling pathway // inferred from direct assay /// 0060599 // lateral sprouting involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060606 // tube closure // inferred from electronic annotation /// 0060638 // mesenchymal-epithelial cell signaling // inferred from electronic annotation /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation /// 0060744 // mammary gland branching involved in thelarche // inferred from electronic annotation /// 0060750 // epithelial cell proliferation involved in mammary gland duct elongation // inferred from electronic annotation /// 0060760 // positive regulation of response to cytokine stimulus // inferred from direct assay /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060907 // positive regulation of macrophage cytokine production // inferred from mutant phenotype /// 0061036 // positive regulation of cartilage development // inferred from electronic annotation /// 0061347 // planar cell polarity pathway involved in outflow tract morphogenesis // inferred from electronic annotation /// 0061348 // planar cell polarity pathway involved in ventricular septum morphogenesis // inferred from electronic annotation /// 0061349 // planar cell polarity pathway involved in cardiac right atrium morphogenesis // inferred from electronic annotation /// 0061350 // planar cell polarity pathway involved in cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0061354 // planar cell polarity pathway involved in pericardium morphogenesis // inferred from electronic annotation /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0071219 // cellular response to molecule of bacterial origin // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from expression pattern /// 0071277 // cellular response to calcium ion // inferred from expression pattern /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity /// 0071346 // cellular response to interferon-gamma // inferred from expression pattern /// 0071425 // hematopoietic stem cell proliferation // inferred from direct assay /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern /// 0072201 // negative regulation of mesenchymal cell proliferation // inferred from direct assay /// 0090009 // primitive streak formation // inferred from electronic annotation /// 0090037 // positive regulation of protein kinase C signaling // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from genetic interaction /// 0090103 // cochlea morphogenesis // inferred from electronic annotation /// 0090179 // planar cell polarity pathway involved in neural tube closure // inferred from electronic annotation /// 2000049 // positive regulation of cell-cell adhesion mediated by cadherin // inferred from electronic annotation /// 2000484 // positive regulation of interleukin-8 secretion // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // traceable author statement </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from electronic annotation /// 0005109 // frizzled binding // inferred from physical interaction /// 0005110 // frizzled-2 binding // inferred from electronic annotation /// 0005115 // receptor tyrosine kinase-like orphan receptor binding // inferred from physical interaction /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0048018 // receptor agonist activity // inferred by curator </td> <td> -48.57 </td> <td> 42.09 </td> <td> -5.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 204214_s_at </td> <td> 204214_s_at </td> <td> NM_006834 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006834.1 /DEF=Homo sapiens RAB32, member RAS oncogene family (RAB32), mRNA. /FEA=mRNA /GEN=RAB32 /PROD=RAB32, member RAS oncogene family /DB_XREF=gi:5803132 /UG=Hs.32217 RAB32, member RAS oncogene family /FL=gb:U71127.1 gb:NM_006834.1 </td> <td> NM_006834 </td> <td> RAB32, member RAS oncogene family </td> <td> RAB32 </td> <td> 10981 </td> <td> NM_006834 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from mutant phenotype /// 0032438 // melanosome organization // inferred from mutant phenotype /// 0035646 // endosome to melanosome transport // inferred from mutant phenotype /// 0090382 // phagosome maturation // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031905 // early endosome lumen // inferred from direct assay /// 0042470 // melanosome // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // non-traceable author statement /// 0030742 // GTP-dependent protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from physical interaction /// 0035612 // AP-2 adaptor complex binding // inferred from direct assay /// 0035650 // AP-1 adaptor complex binding // inferred from physical interaction /// 0035651 // AP-3 adaptor complex binding // inferred from physical interaction </td> <td> -98.32 </td> <td> 345.41 </td> <td> -5.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 221486_at </td> <td> 221486_at </td> <td> AF067170 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF067170.1 /DEF=Homo sapiens alpha endosulfine mRNA, complete cds. /FEA=mRNA /PROD=alpha endosulfine /DB_XREF=gi:4894373 /UG=Hs.111680 endosulfine alpha /FL=gb:AF067170.1 gb:AF157510.1 </td> <td> AF067170 </td> <td> endosulfine alpha </td> <td> ENSA </td> <td> 2029 </td> <td> NM_004436 /// NM_207042 /// NM_207043 /// NM_207044 /// NM_207045 /// NM_207046 /// NM_207047 /// NM_207168 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from sequence or structural similarity /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from sequence or structural similarity /// 0007584 // response to nutrient // traceable author statement /// 0009749 // response to glucose // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0050790 // regulation of catalytic activity // inferred from sequence or structural similarity /// 0050796 // regulation of insulin secretion // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from direct assay /// 0008200 // ion channel inhibitor activity // traceable author statement /// 0008601 // protein phosphatase type 2A regulator activity // inferred from sequence or structural similarity /// 0019212 // phosphatase inhibitor activity // inferred from sequence or structural similarity /// 0019870 // potassium channel inhibitor activity // inferred from direct assay /// 0051721 // protein phosphatase 2A binding // inferred from sequence or structural similarity </td> <td> 75.80 </td> <td> 149.50 </td> <td> 5.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212312_at </td> <td> 212312_at </td> <td> AL117381 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL117381 /DEF=Human DNA sequence from clone RP5-857M17 on chromosome 20 Contains ESTs, STSs, GSSs and CpG islands. Contains the 3 part of the ID1 gene for inhibitor of DNA binding 1 (dominant negative helix-loop-helix protein), a gene for a novel protein simil... /FEA=mRNA_1 /DB_XREF=gi:11493211 /UG=Hs.305890 BCL2-like 1 </td> <td> AL117381 </td> <td> BCL2-like 1 </td> <td> BCL2L1 </td> <td> 598 </td> <td> NM_001191 /// NM_138578 /// XM_005260481 /// XM_005260482 /// XM_005260483 /// XM_005260484 /// XM_005260485 /// XM_005260486 /// XM_005260487 /// XM_006723843 /// XM_006723844 /// XM_006723845 </td> <td> 0000910 // cytokinesis // inferred from mutant phenotype /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from direct assay /// 0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007093 // mitotic cell cycle checkpoint // inferred from mutant phenotype /// 0007281 // germ cell development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0008637 // apoptotic mitochondrial changes // traceable author statement /// 0009314 // response to radiation // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0010507 // negative regulation of autophagy // traceable author statement /// 0019050 // suppression by virus of host apoptotic process // inferred from direct assay /// 0034097 // response to cytokine // inferred from direct assay /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040007 // growth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0046898 // response to cycloheximide // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from direct assay /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from direct assay /// 0060154 // cellular process regulating host cell cycle in response to virus // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071312 // cellular response to alkaloid // inferred from electronic annotation /// 0071480 // cellular response to gamma radiation // inferred from electronic annotation /// 0071839 // apoptotic process in bone marrow // inferred from electronic annotation /// 0090005 // negative regulation of establishment of protein localization to plasma membrane // inferred from direct assay /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred by curator /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // not recorded /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 0097284 // hepatocyte apoptotic process // inferred from electronic annotation /// 1900118 // negative regulation of execution phase of apoptosis // inferred from direct assay /// 1902230 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage // inferred from direct assay /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from direct assay /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // non-traceable author statement /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0097136 // Bcl-2 family protein complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // not recorded /// 0046982 // protein heterodimerization activity // not recorded /// 0051434 // BH3 domain binding // inferred from physical interaction </td> <td> 119.90 </td> <td> 161.43 </td> <td> 5.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203575_at </td> <td> 203575_at </td> <td> NM_001896 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001896.1 /DEF=Homo sapiens casein kinase 2, alpha prime polypeptide (CSNK2A2), mRNA.  /FEA=mRNA /GEN=CSNK2A2 /PROD=casein kinase 2, alpha prime polypeptide /DB_XREF=gi:4503096 /UG=Hs.82201 casein kinase 2, alpha prime polypeptide /FL=gb:M55268.1 gb:NM_001896.1 </td> <td> NM_001896 </td> <td> casein kinase 2, alpha prime polypeptide </td> <td> CSNK2A2 </td> <td> 1459 </td> <td> NM_001896 /// XM_005255799 /// XM_005255800 /// XM_005255801 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0071174 // mitotic spindle checkpoint // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0031519 // PcG protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -100.85 </td> <td> 168.82 </td> <td> -5.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201431_s_at </td> <td> 201431_s_at </td> <td> NM_001387 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001387.1 /DEF=Homo sapiens dihydropyrimidinase-like 3 (DPYSL3), mRNA. /FEA=mRNA /GEN=DPYSL3 /PROD=dihydropyrimidinase-like 3 /DB_XREF=gi:4503378 /UG=Hs.74566 dihydropyrimidinase-like 3 /FL=gb:D78014.1 gb:NM_001387.1 </td> <td> NM_001387 </td> <td> dihydropyrimidinase-like 3 </td> <td> DPYSL3 </td> <td> 1809 </td> <td> NM_001197294 /// NM_001387 </td> <td> 0006208 // pyrimidine nucleobase catabolic process // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0010977 // negative regulation of neuron projection development // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0048666 // neuron development // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from sequence or structural similarity /// 0051017 // actin filament bundle assembly // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from sequence or structural similarity /// 0051491 // positive regulation of filopodium assembly // inferred from sequence or structural similarity /// 0051764 // actin crosslink formation // inferred from sequence or structural similarity /// 0071345 // cellular response to cytokine stimulus // inferred from sequence or structural similarity </td> <td> 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0031941 // filamentous actin // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0044297 // cell body // inferred from sequence or structural similarity /// 0070382 // exocytic vesicle // inferred from sequence or structural similarity </td> <td> 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from sequence or structural similarity /// 0035374 // chondroitin sulfate binding // inferred from sequence or structural similarity /// 0051219 // phosphoprotein binding // inferred from electronic annotation </td> <td> 154.85 </td> <td> 349.40 </td> <td> 5.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 205353_s_at </td> <td> 205353_s_at </td> <td> NM_002567 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002567.1 /DEF=Homo sapiens prostatic binding protein (PBP), mRNA. /FEA=mRNA /GEN=PBP /PROD=prostatic binding protein /DB_XREF=gi:4505620 /UG=Hs.80423 prostatic binding protein /FL=gb:D16111.1 gb:NM_002567.1 </td> <td> NM_002567 </td> <td> phosphatidylethanolamine binding protein 1 </td> <td> PEBP1 </td> <td> 5037 </td> <td> NM_002567 </td> <td> 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0008429 // phosphatidylethanolamine binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 87.53 </td> <td> 215.51 </td> <td> 5.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 219774_at </td> <td> 219774_at </td> <td> NM_019044 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019044.1 /DEF=Homo sapiens hypothetical protein (FLJ10996), mRNA. /FEA=mRNA /GEN=FLJ10996 /PROD=hypothetical protein /DB_XREF=gi:9506632 /UG=Hs.98324 hypothetical protein /FL=gb:NM_019044.1 </td> <td> NM_019044 </td> <td> coiled-coil domain containing 93 </td> <td> CCDC93 </td> <td> 54520 </td> <td> NM_019044 /// XM_006712597 /// XM_006712598 /// XM_006712599 /// XM_006712600 </td> <td>  </td> <td>  </td> <td>  </td> <td> -54.52 </td> <td> 65.34 </td> <td> -5.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 221962_s_at </td> <td> 221962_s_at </td> <td> AI829920 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI829920 /FEA=EST /DB_XREF=gi:5450591 /DB_XREF=est:wj47d11.x1 /CLONE=IMAGE:2405973 /UG=Hs.28505 ubiquitin-conjugating enzyme E2H (homologous to yeast UBC8) </td> <td> AI829920 </td> <td> ubiquitin-conjugating enzyme E2H </td> <td> UBE2H </td> <td> 7328 </td> <td> NM_001202498 /// NM_003344 /// NM_182697 </td> <td> 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td>  </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> -94.22 </td> <td> 220.99 </td> <td> -5.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 220547_s_at </td> <td> 220547_s_at </td> <td> NM_019054 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019054.1 /DEF=Homo sapiens hypothetical protein MGC5560 (MGC5560), mRNA. /FEA=mRNA /GEN=MGC5560 /PROD=hypothetical protein MGC5560 /DB_XREF=gi:12963480 /UG=Hs.233150 hypothetical protein MGC5560 /FL=gb:NM_019054.1 </td> <td> NM_019054 </td> <td> family with sequence similarity 35, member A </td> <td> FAM35A </td> <td> 54537 </td> <td> NM_019054 /// XM_005269920 /// XM_006717902 /// XM_006717903 /// XM_006717904 /// XM_006717905 /// XM_006717906 </td> <td>  </td> <td>  </td> <td>  </td> <td> 103.65 </td> <td> 217.85 </td> <td> 5.66 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212899_at </td> <td> 212899_at </td> <td> AB028951 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB028951.1 /DEF=Homo sapiens mRNA for KIAA1028 protein, partial cds. /FEA=mRNA /GEN=KIAA1028 /PROD=KIAA1028 protein /DB_XREF=gi:5689392 /UG=Hs.129836 KIAA1028 protein </td> <td> AB028951 </td> <td> cyclin-dependent kinase 19 </td> <td> CDK19 </td> <td> 23097 </td> <td> NM_015076 /// XM_005266870 /// XM_005266871 /// XM_005266872 /// XM_005266873 /// XM_006715402 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td>  </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -52.25 </td> <td> 87.12 </td> <td> -5.65 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 214113_s_at </td> <td> 214113_s_at </td> <td> AI738479 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI738479 /FEA=EST /DB_XREF=gi:5100460 /DB_XREF=est:wi32d06.x1 /CLONE=IMAGE:2391947 /UG=Hs.65648 RNA binding motif protein 8A </td> <td> AI738479 </td> <td> RNA binding motif protein 8A </td> <td> RBM8A </td> <td> 9939 </td> <td> NM_005105 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from mutant phenotype /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003729 // mRNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 51.87 </td> <td> 97.91 </td> <td> 5.64 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 220419_s_at </td> <td> 220419_s_at </td> <td> NM_013396 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013396.1 /DEF=Homo sapiens ubiquitin specific protease 25 (USP25), mRNA. /FEA=mRNA /GEN=USP25 /PROD=ubiquitin specific protease 25 /DB_XREF=gi:7019564 /UG=Hs.186961 ubiquitin specific protease 25 /FL=gb:AF134213.1 gb:NM_013396.1 </td> <td> NM_013396 </td> <td> ubiquitin specific peptidase 25 </td> <td> USP25 </td> <td> 29761 </td> <td> NM_001283041 /// NM_001283042 /// NM_013396 /// XM_005260949 /// XM_006723992 /// XR_430349 </td> <td> 0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0070536 // protein K63-linked deubiquitination // inferred from mutant phenotype /// 0071108 // protein K48-linked deubiquitination // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // traceable author statement /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0032183 // SUMO binding // inferred from direct assay /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation </td> <td> -69.85 </td> <td> 250.07 </td> <td> -5.63 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201053_s_at </td> <td> 201053_s_at </td> <td> NM_006814 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006814.1 /DEF=Homo sapiens proteasome (prosome, macropain) inhibitor subunit 1 (PI31) (PSMF1), mRNA.  /FEA=mRNA /GEN=PSMF1 /PROD=proteasome inhibitor /DB_XREF=gi:5803122 /UG=Hs.75925 proteasome (prosome, macropain) inhibitor subunit 1 (PI31) /FL=gb:D88378.1 gb:NM_006814.1 </td> <td> NM_006814 </td> <td> proteasome (prosome, macropain) inhibitor subunit 1 (PI31) </td> <td> PSMF1 </td> <td> 9491 </td> <td> NM_006814 /// NM_178578 /// NM_178579 /// XM_005260873 /// XM_005260874 /// XM_006723664 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010951 // negative regulation of endopeptidase activity // non-traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 1901799 // negative regulation of proteasomal protein catabolic process // inferred from direct assay </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // non-traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0004866 // endopeptidase inhibitor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0070628 // proteasome binding // inferred from direct assay </td> <td> 50.87 </td> <td> 71.39 </td> <td> 5.63 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 213065_at </td> <td> 213065_at </td> <td> AB011118 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB011118.1 /DEF=Homo sapiens mRNA for KIAA0546 protein, partial cds. /FEA=mRNA /GEN=KIAA0546 /PROD=KIAA0546 protein /DB_XREF=gi:3043615 /UG=Hs.26764 KIAA0546 protein </td> <td> AB011118 </td> <td> zinc finger, C3H1-type containing </td> <td> ZFC3H1 </td> <td> 196441 </td> <td> NM_144982 </td> <td> 0006396 // RNA processing // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 68.10 </td> <td> 100.95 </td> <td> 5.63 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202577_s_at </td> <td> 202577_s_at </td> <td> BC005162 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005162.1 /DEF=Homo sapiens, hypothetical protein FLJ11126, clone MGC:4651, mRNA, complete cds.  /FEA=mRNA /PROD=hypothetical protein FLJ11126 /DB_XREF=gi:13477370 /UG=Hs.226396 hypothetical protein FLJ11126 /FL=gb:BC005162.1 gb:NM_018332.1 </td> <td> BC005162 </td> <td> DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A </td> <td> DDX19A </td> <td> 55308 </td> <td> NM_018332 /// XM_005256030 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 52.45 </td> <td> 91.22 </td> <td> 5.63 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209224_s_at </td> <td> 209224_s_at </td> <td> BC003674 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003674.1 /DEF=Homo sapiens, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2 (8kD, B8), clone MGC:12315, mRNA, complete cds.  /FEA=mRNA /PROD=NADH dehydrogenase (ubiquinone) 1 alphasubcomplex, 2 (8kD, B8) /DB_XREF=gi:13277539 /UG=Hs.163867 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2 (8kD, B8) /FL=gb:BC003674.1 gb:AF047185.1 gb:NM_002488.1 gb:AF077029.1 </td> <td> BC003674 </td> <td> NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa </td> <td> NDUFA2 </td> <td> 4695 </td> <td> NM_001185012 /// NM_002488 /// NR_033697 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> 75.82 </td> <td> 225.01 </td> <td> 5.62 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201751_at </td> <td> 201751_at </td> <td> NM_014876 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014876.1 /DEF=Homo sapiens KIAA0063 gene product (KIAA0063), mRNA. /FEA=mRNA /GEN=KIAA0063 /PROD=KIAA0063 gene product /DB_XREF=gi:7661887 /UG=Hs.3094 KIAA0063 gene product /FL=gb:D31884.1 gb:NM_014876.1 </td> <td> NM_014876 </td> <td> Josephin domain containing 1 </td> <td> JOSD1 </td> <td> 9929 </td> <td> NM_014876 /// XM_005261876 /// XM_005261877 /// XM_005261878 /// XM_005261879 </td> <td> 0006508 // proteolysis // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0008233 // peptidase activity // inferred from electronic annotation /// 0008242 // omega peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 56.07 </td> <td> 170.86 </td> <td> 5.62 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212385_at </td> <td> 212385_at </td> <td> AU118026 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU118026 /FEA=EST /DB_XREF=gi:10933043 /DB_XREF=est:AU118026 /CLONE=HEMBA1002729 /UG=Hs.289068 Homo sapiens cDNA FLJ11918 fis, clone HEMBB1000272 </td> <td> AU118026 </td> <td> transcription factor 4 </td> <td> TCF4 </td> <td> 6925 </td> <td> NM_001083962 /// NM_001243226 /// NM_001243227 /// NM_001243228 /// NM_001243230 /// NM_001243231 /// NM_001243232 /// NM_001243233 /// NM_001243234 /// NM_001243235 /// NM_001243236 /// NM_003199 /// XM_005266739 /// XM_005266741 /// XM_005266743 /// XM_005266744 /// XM_005266745 /// XM_005266746 /// XM_005266747 /// XM_005266749 /// XM_005266750 /// XM_005266752 /// XM_005266754 /// XM_005266755 /// XM_005266761 /// XM_006722529 /// XM_006722530 /// XM_006722531 /// XM_006722532 /// XM_006722533 /// XM_006722534 /// XM_006722535 /// XM_006722536 /// XM_006722537 /// XM_006722538 /// XM_006722539 /// XM_006722540 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006352 // DNA-templated transcription, initiation // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from sequence or structural similarity </td> <td> -109.32 </td> <td> 296.56 </td> <td> -5.61 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 205194_at </td> <td> 205194_at </td> <td> NM_004577 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004577.1 /DEF=Homo sapiens phosphoserine phosphatase (PSPH), mRNA. /FEA=mRNA /GEN=PSPH /PROD=phosphoserine phosphatase /DB_XREF=gi:4758971 /UG=Hs.56407 phosphoserine phosphatase /FL=gb:NM_004577.1 </td> <td> NM_004577 </td> <td> phosphoserine phosphatase </td> <td> PSPH </td> <td> 5723 </td> <td> NM_004577 /// XM_005271773 /// XM_005271774 /// XM_005271775 /// XM_005271776 /// XM_005271777 /// XM_006715760 /// XM_006715761 </td> <td> 0006563 // L-serine metabolic process // inferred from direct assay /// 0006564 // L-serine biosynthetic process // not recorded /// 0006564 // L-serine biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0033574 // response to testosterone // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0043005 // neuron projection // inferred from electronic annotation </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0004647 // phosphoserine phosphatase activity // inferred from direct assay /// 0004647 // phosphoserine phosphatase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0008253 // 5'-nucleotidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -54.65 </td> <td> 62.73 </td> <td> -5.61 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203414_at </td> <td> 203414_at </td> <td> NM_012329 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012329.1 /DEF=Homo sapiens monocyte to macrophage differentiation-associated (MMD), mRNA.  /FEA=mRNA /GEN=MMD /PROD=monocyte to macrophagedifferentiation-associated, precursor /DB_XREF=gi:6912507 /UG=Hs.79889 monocyte to macrophage differentiation-associated /FL=gb:NM_012329.1 </td> <td> NM_012329 </td> <td> monocyte to macrophage differentiation-associated </td> <td> MMD </td> <td> 23531 </td> <td> NM_012329 /// XM_006721795 /// XR_429880 </td> <td> 0019835 // cytolysis // inferred from electronic annotation </td> <td> 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // traceable author statement </td> <td> -107.78 </td> <td> 190.89 </td> <td> -5.61 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 215440_s_at </td> <td> 215440_s_at </td> <td> AL523320 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL523320 /FEA=EST /DB_XREF=gi:12786813 /DB_XREF=est:AL523320 /CLONE=CS0DC001YD02 (5 prime) /UG=Hs.184736 hypothetical protein FLJ10097 </td> <td> AL523320 </td> <td> brain expressed, X-linked 4 </td> <td> BEX4 </td> <td> 56271 </td> <td> NM_001080425 /// NM_001127688 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td>  </td> <td> 54.45 </td> <td> 92.58 </td> <td> 5.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 220610_s_at </td> <td> 220610_s_at </td> <td> NM_006309 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006309.1 /DEF=Homo sapiens leucine rich repeat (in FLII) interacting protein 2 (LRRFIP2), mRNA.  /FEA=mRNA /GEN=LRRFIP2 /PROD=leucine rich repeat (in FLII) interactingprotein 2 /DB_XREF=gi:5453725 /UG=Hs.57672 leucine rich repeat (in FLII) interacting protein 2 /FL=gb:AF115509.1 gb:NM_006309.1 </td> <td> NM_006309 </td> <td> leucine rich repeat (in FLII) interacting protein 2 </td> <td> LRRFIP2 </td> <td> 9209 </td> <td> NM_001134369 /// NM_001282691 /// NM_006309 /// NM_017724 /// XM_005265538 /// XM_005265539 /// XM_005265540 /// XM_005265550 /// XM_005265551 /// XM_005265553 /// XM_005265554 /// XM_005265555 /// XM_005265556 /// XM_005265557 /// XM_006713385 /// XM_006713386 /// XM_006713387 /// XM_006713388 /// XM_006713389 /// XM_006713390 /// XM_006713391 /// XM_006713392 /// XM_006713393 /// XM_006713394 /// XM_006713395 /// XM_006713396 /// XM_006713397 /// XM_006713398 /// XM_006713399 /// XM_006713400 /// XM_006713401 /// XM_006713402 /// XM_006713403 /// XM_006713404 </td> <td> 0016055 // Wnt signaling pathway // inferred from electronic annotation </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030275 // LRR domain binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -53.82 </td> <td> 77.81 </td> <td> -5.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 210627_s_at </td> <td> 210627_s_at </td> <td> BC002804 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002804.1 /DEF=Homo sapiens, Similar to glucosidase I, clone MGC:3544, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to glucosidase I /DB_XREF=gi:12803914 /UG=Hs.83919 glucosidase I /FL=gb:BC002804.1 </td> <td> BC002804 </td> <td> mannosyl-oligosaccharide glucosidase </td> <td> MOGS </td> <td> 7841 </td> <td> NM_001146158 /// NM_006302 </td> <td> 0006457 // protein folding // traceable author statement /// 0006487 // protein N-linked glycosylation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009311 // oligosaccharide metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004573 // mannosyl-oligosaccharide glucosidase activity // inferred from electronic annotation /// 0015926 // glucosidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation </td> <td> 63.85 </td> <td> 69.75 </td> <td> 5.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212795_at </td> <td> 212795_at </td> <td> AL137753 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL137753.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434K1412 (from clone DKFZp434K1412). /FEA=mRNA /DB_XREF=gi:6808455 /UG=Hs.12144 KIAA1033 protein </td> <td> AL137753 </td> <td> KIAA1033 </td> <td> KIAA1033 </td> <td> 23325 </td> <td> NM_001293640 /// NM_015275 /// XM_005268742 /// XM_005268743 /// XM_005268744 /// XM_005268745 /// XM_005268746 /// XR_245916 </td> <td> 0016197 // endosomal transport // inferred from mutant phenotype /// 0016197 // endosomal transport // inferred from sequence or structural similarity </td> <td> 0005768 // endosome // inferred from direct assay /// 0071203 // WASH complex // inferred from direct assay </td> <td>  </td> <td> 77.02 </td> <td> 182.41 </td> <td> 5.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218519_at </td> <td> 218519_at </td> <td> NM_017945 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017945.1 /DEF=Homo sapiens hypothetical protein FLJ20730 (FLJ20730), mRNA. /FEA=mRNA /GEN=FLJ20730 /PROD=hypothetical protein FLJ20730 /DB_XREF=gi:8923656 /UG=Hs.237480 hypothetical protein FLJ20730 /FL=gb:BC005207.1 gb:NM_017945.1 </td> <td> NM_017945 </td> <td> solute carrier family 35, member A5 </td> <td> SLC35A5 </td> <td> 55032 </td> <td> NM_017945 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015780 // nucleotide-sugar transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 1901679 // nucleotide transmembrane transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005338 // nucleotide-sugar transmembrane transporter activity // inferred from electronic annotation /// 0005351 // sugar:proton symporter activity // inferred from electronic annotation </td> <td> 56.15 </td> <td> 66.78 </td> <td> 5.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 213567_at </td> <td> 213567_at </td> <td> BF431965 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF431965 /FEA=EST /DB_XREF=gi:11444079 /DB_XREF=est:nab83d09.x1 /CLONE=IMAGE:3274409 /UG=Hs.153106 Homo sapiens clone 23728 mRNA sequence </td> <td> BF431965 </td> <td> karyopherin alpha 4 (importin alpha 3) </td> <td> KPNA4 </td> <td> 3840 </td> <td> NM_002268 </td> <td> 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> 52.28 </td> <td> 77.99 </td> <td> 5.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 204009_s_at </td> <td> 204009_s_at </td> <td> W80678 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W80678 /FEA=EST /DB_XREF=gi:1391858 /DB_XREF=est:zd90d06.s1 /CLONE=IMAGE:356747 /UG=Hs.184050 v-Ki-ras2 Kirsten rat sarcoma 2 viral oncogene homolog /FL=gb:M54968.1 gb:NM_004985.1 </td> <td> W80678 </td> <td> Kirsten rat sarcoma viral oncogene homolog </td> <td> KRAS </td> <td> 3845 </td> <td> NM_004985 /// NM_033360 /// XM_006719069 </td> <td> 0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007569 // cell aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008542 // visual learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0035022 // positive regulation of Rac protein signal transduction // inferred from electronic annotation /// 0035176 // social behavior // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051385 // response to mineralocorticoid // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0097193 // intrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019002 // GMP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation /// 0030275 // LRR domain binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from direct assay </td> <td> 151.05 </td> <td> 215.77 </td> <td> 5.60 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 210214_s_at </td> <td> 210214_s_at </td> <td> U25110 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U25110.1 /DEF=Human bone morphogenic protein type II receptor mRNA, complete cds. /FEA=mRNA /PROD=bone morphogenic protein type II receptor /DB_XREF=gi:882390 /UG=Hs.53250 bone morphogenetic protein receptor, type II (serinethreonine kinase) /FL=gb:U25110.1 </td> <td> U25110 </td> <td> bone morphogenetic protein receptor, type II (serine/threonine kinase) </td> <td> BMPR2 </td> <td> 659 </td> <td> NM_001204 /// NM_033346 </td> <td> 0001707 // mesoderm formation // inferred from sequence or structural similarity /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001946 // lymphangiogenesis // inferred from sequence or structural similarity /// 0001974 // blood vessel remodeling // inferred from sequence or structural similarity /// 0002063 // chondrocyte development // inferred from mutant phenotype /// 0003085 // negative regulation of systemic arterial blood pressure // inferred from mutant phenotype /// 0006366 // transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from direct assay /// 0007420 // brain development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from expression pattern /// 0009952 // anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010634 // positive regulation of epithelial cell migration // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0014916 // regulation of lung blood pressure // inferred from mutant phenotype /// 0014916 // regulation of lung blood pressure // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from sequence or structural similarity /// 0030509 // BMP signaling pathway // traceable author statement /// 0030513 // positive regulation of BMP signaling pathway // inferred from mutant phenotype /// 0032924 // activin receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045906 // negative regulation of vasoconstriction // inferred from sequence or structural similarity /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0048286 // lung alveolus development // inferred from sequence or structural similarity /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0060836 // lymphatic endothelial cell differentiation // inferred from sequence or structural similarity /// 0060840 // artery development // inferred from sequence or structural similarity /// 0060841 // venous blood vessel development // inferred from sequence or structural similarity /// 0061298 // retina vasculature development in camera-type eye // inferred from sequence or structural similarity /// 1902731 // negative regulation of chondrocyte proliferation // inferred from mutant phenotype /// 2000279 // negative regulation of DNA biosynthetic process // inferred from mutant phenotype </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005901 // caveola // inferred from mutant phenotype /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044214 // fully spanning plasma membrane // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016362 // activin receptor activity, type II // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -127.72 </td> <td> 184.41 </td> <td> -5.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202544_at </td> <td> 202544_at </td> <td> NM_004124 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004124.1 /DEF=Homo sapiens glia maturation factor, beta (GMFB), mRNA. /FEA=mRNA /GEN=GMFB /PROD=glia maturation factor, beta /DB_XREF=gi:4758441 /UG=Hs.151413 glia maturation factor, beta /FL=gb:BC005359.1 gb:M86492.1 gb:AB001106.1 gb:NM_004124.1 </td> <td> NM_004124 </td> <td> glia maturation factor, beta </td> <td> GMFB </td> <td> 2764 </td> <td> NM_004124 /// XM_005267541 /// XM_006720118 </td> <td> 0006468 // protein phosphorylation // traceable author statement /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0008047 // enzyme activator activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation </td> <td> 112.43 </td> <td> 317.59 </td> <td> 5.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209161_at </td> <td> 209161_at </td> <td> AI184802 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI184802 /FEA=EST /DB_XREF=gi:3735440 /DB_XREF=est:qd24g04.x1 /CLONE=IMAGE:1724694 /UG=Hs.8551 PRP4STKWD splicing factor /FL=gb:AF016369.1 gb:U82756.1 gb:NM_004697.1 </td> <td> AI184802 </td> <td> pre-mRNA processing factor 4 </td> <td> PRPF4 </td> <td> 9128 </td> <td> NM_001244926 /// NM_004697 /// XM_005252300 </td> <td> 0000375 // RNA splicing, via transesterification reactions // non-traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred by curator /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071001 // U4/U6 snRNP // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 68.23 </td> <td> 96.64 </td> <td> 5.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218460_at </td> <td> 218460_at </td> <td> NM_017802 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017802.1 /DEF=Homo sapiens hypothetical protein FLJ20397 (FLJ20397), mRNA. /FEA=mRNA /GEN=FLJ20397 /PROD=hypothetical protein FLJ20397 /DB_XREF=gi:8923371 /UG=Hs.272688 hypothetical protein FLJ20397 /FL=gb:NM_017802.1 </td> <td> NM_017802 </td> <td> HEAT repeat containing 2 </td> <td> HEATR2 </td> <td> 54919 </td> <td> NM_017802 /// NR_075098 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 84.32 </td> <td> 248.89 </td> <td> 5.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 217922_at </td> <td> 217922_at </td> <td> AL157902 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL157902 /DEF=Human DNA sequence from clone RP4-675C20 on chromosome 1p13.2. Contains the 3 end of the MAN1A2 gene for mannosidase alpha 1A2, a pseudogene similar to predicted fly, worm and yeast genes, ESTs, STSs and GSSs /FEA=mRNA /DB_XREF=gi:9581579 /UG=Hs.239114 mannosidase, alpha, class 1A, member 2 /FL=gb:AF027156.1 gb:NM_006699.1 </td> <td> AL157902 </td> <td> mannosidase, alpha, class 1A, member 2 </td> <td> MAN1A2 </td> <td> 10905 </td> <td> NM_006699 /// XM_006710302 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0006491 // N-glycan processing // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009100 // glycoprotein metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048286 // lung alveolus development // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation </td> <td> 170.72 </td> <td> 206.46 </td> <td> 5.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202894_at </td> <td> 202894_at </td> <td> NM_004444 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004444.1 /DEF=Homo sapiens EphB4 (EPHB4) mRNA. /FEA=mRNA /GEN=HTK /PROD=EphB4 /DB_XREF=gi:4758289 /UG=Hs.155227 EphB4 /FL=gb:NM_004444.1 gb:U07695.1 </td> <td> NM_004444 </td> <td> EPH receptor B4 </td> <td> EPHB4 </td> <td> 2050 </td> <td> NM_004444 </td> <td> 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from direct assay /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0005003 // ephrin receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -114.37 </td> <td> 252.86 </td> <td> -5.59 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202154_x_at </td> <td> 202154_x_at </td> <td> NM_006086 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006086.1 /DEF=Homo sapiens tubulin, beta, 4 (TUBB4), mRNA. /FEA=mRNA /GEN=TUBB4 /PROD=tubulin, beta, 4 /DB_XREF=gi:5174736 /UG=Hs.159154 tubulin, beta, 4 /FL=gb:BC000748.1 gb:U47634.1 gb:NM_006086.1 </td> <td> NM_006086 </td> <td> tubulin, beta 3 class III </td> <td> TUBB3 </td> <td> 10381 </td> <td> NM_001197181 /// NM_006086 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // inferred from mutant phenotype /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation </td> <td> 312.40 </td> <td> 686.70 </td> <td> 5.58 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 219459_at </td> <td> 219459_at </td> <td> NM_018082 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018082.1 /DEF=Homo sapiens hypothetical protein FLJ10388 (FLJ10388), mRNA. /FEA=mRNA /GEN=FLJ10388 /PROD=hypothetical protein FLJ10388 /DB_XREF=gi:8922398 /UG=Hs.197642 hypothetical protein FLJ10388 /FL=gb:NM_018082.1 </td> <td> NM_018082 </td> <td> polymerase (RNA) III (DNA directed) polypeptide B </td> <td> POLR3B </td> <td> 55703 </td> <td> NM_001160708 /// NM_018082 /// XM_006719498 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032728 // positive regulation of interferon-beta production // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045089 // positive regulation of innate immune response // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005666 // DNA-directed RNA polymerase III complex // not recorded /// 0005666 // DNA-directed RNA polymerase III complex // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0001056 // RNA polymerase III activity // not recorded /// 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0032549 // ribonucleoside binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 49.35 </td> <td> 107.58 </td> <td> 5.58 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203272_s_at </td> <td> 203272_s_at </td> <td> BF308548 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF308548 /FEA=EST /DB_XREF=gi:11255776 /DB_XREF=est:601890403F1 /CLONE=IMAGE:4131457 /UG=Hs.8186 lung cancer candidate /FL=gb:AF055479.1 gb:NM_007275.1 </td> <td> BF308548 </td> <td> tumor suppressor candidate 2 </td> <td> TUSC2 </td> <td> 11334 </td> <td> NM_007275 </td> <td> 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0032618 // interleukin-15 production // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from electronic annotation /// 0071609 // chemokine (C-C motif) ligand 5 production // inferred from electronic annotation /// 2000377 // regulation of reactive oxygen species metabolic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation </td> <td>  </td> <td> 66.15 </td> <td> 124.50 </td> <td> 5.58 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 211951_at </td> <td> 211951_at </td> <td> D21262 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D21262.1 /DEF=Human mRNA for KIAA0035 gene, partial cds. /FEA=mRNA /GEN=KIAA0035 /PROD=ORF /DB_XREF=gi:434764 /UG=Hs.75337 nucleolar phosphoprotein p130 </td> <td> D21262 </td> <td> nucleolar and coiled-body phosphoprotein 1 </td> <td> NOLC1 </td> <td> 9221 </td> <td> NM_001284388 /// NM_001284389 /// NM_004741 /// XM_005270273 </td> <td> 0006364 // rRNA processing // traceable author statement /// 0007000 // nucleolus organization // inferred from electronic annotation /// 0007049 // cell cycle // traceable author statement /// 0007067 // mitotic nuclear division // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 123.33 </td> <td> 220.39 </td> <td> 5.58 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201468_s_at </td> <td> 201468_s_at </td> <td> NM_000903 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000903.1 /DEF=Homo sapiens diaphorase (NADHNADPH) (cytochrome b-5 reductase) (DIA4), mRNA.  /FEA=mRNA /GEN=DIA4 /PROD=NAD(P)H menadione oxidoreductase 1,dioxin-inducible /DB_XREF=gi:4505414 /UG=Hs.80706 diaphorase (NADHNADPH) (cytochrome b-5 reductase) /FL=gb:J03934.1 gb:NM_000903.1 </td> <td> NM_000903 </td> <td> NAD(P)H dehydrogenase, quinone 1 </td> <td> NQO1 </td> <td> 1728 </td> <td> NM_000903 /// NM_001025433 /// NM_001025434 /// NM_001286137 </td> <td> 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006801 // superoxide metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006809 // nitric oxide biosynthetic process // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007271 // synaptic transmission, cholinergic // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0009636 // response to toxic substance // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019430 // removal of superoxide radicals // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003955 // NAD(P)H dehydrogenase (quinone) activity // inferred from electronic annotation /// 0004128 // cytochrome-b5 reductase activity, acting on NAD(P)H // traceable author statement /// 0004784 // superoxide dismutase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 73.23 </td> <td> 356.74 </td> <td> 5.57 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209568_s_at </td> <td> 209568_s_at </td> <td> AF186779 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF186779.1 /DEF=Homo sapiens RGL protein (RGL) mRNA, complete cds. /FEA=mRNA /GEN=RGL /PROD=RGL protein /DB_XREF=gi:7682470 /UG=Hs.79219 RalGDS-like gene; KIAA0959 protein /FL=gb:AF186779.1 </td> <td> AF186779 </td> <td> ral guanine nucleotide dissociation stimulator-like 1 </td> <td> RGL1 </td> <td> 23179 </td> <td> NM_015149 /// XM_005245010 /// XM_005245011 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // non-traceable author statement /// 0032315 // regulation of Ral GTPase activity // non-traceable author statement /// 0032852 // positive regulation of Ral GTPase activity // non-traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0008321 // Ral guanyl-nucleotide exchange factor activity // non-traceable author statement </td> <td> 247.40 </td> <td> 396.62 </td> <td> 5.57 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 220052_s_at </td> <td> 220052_s_at </td> <td> NM_012461 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012461.1 /DEF=Homo sapiens TERF1 (TRF1)-interacting nuclear factor 2 (TINF2), mRNA.  /FEA=mRNA /GEN=TINF2 /PROD=TERF1 (TRF1)-interacting nuclear factor 2 /DB_XREF=gi:6912715 /UG=Hs.7797 TERF1 (TRF1)-interacting nuclear factor 2 /FL=gb:AF195512.1 gb:NM_012461.1 </td> <td> NM_012461 </td> <td> TERF1 (TRF1)-interacting nuclear factor 2 </td> <td> TINF2 </td> <td> 26277 </td> <td> NM_001099274 /// NM_012461 /// XM_005267528 /// XM_005267529 </td> <td> 0000723 // telomere maintenance // traceable author statement /// 0010833 // telomere maintenance via telomere lengthening // inferred from mutant phenotype /// 0010836 // negative regulation of protein ADP-ribosylation // inferred from genetic interaction /// 0032202 // telomere assembly // inferred from mutant phenotype /// 0032205 // negative regulation of telomere maintenance // inferred from electronic annotation /// 0032206 // positive regulation of telomere maintenance // inferred from mutant phenotype /// 0032211 // negative regulation of telomere maintenance via telomerase // inferred by curator /// 0032211 // negative regulation of telomere maintenance via telomerase // inferred from genetic interaction /// 0034502 // protein localization to chromosome // inferred by curator /// 0034502 // protein localization to chromosome // inferred from mutant phenotype /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0070198 // protein localization to chromosome, telomeric region // inferred from mutant phenotype </td> <td> 0000781 // chromosome, telomeric region // inferred from direct assay /// 0000783 // nuclear telomere cap complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0010370 // perinucleolar chromocenter // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042162 // telomeric DNA binding // inferred from direct assay </td> <td> 52.20 </td> <td> 46.15 </td> <td> 5.57 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212234_at </td> <td> 212234_at </td> <td> AL034550 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL034550 /DEF=Human DNA sequence from clone RP5-1184F4 on chromosome 20q11.1-11.23. Contains the 3 end of gene KIAA0978, two genes for novel proteins similar to nucleolar protein 4 (NOL4) (NOLP), and one or two novel genes. Contains ESTs, STSs, GSSs and three ... /FEA=mRNA_4 /DB_XREF=gi:9187334 /UG=Hs.3686 KIAA0978 protein </td> <td> AL034550 </td> <td> additional sex combs like transcriptional regulator 1 </td> <td> ASXL1 </td> <td> 171023 </td> <td> NM_001164603 /// NM_015338 /// XM_006723727 /// XM_006723728 /// XM_006723729 /// XM_006723730 /// XM_006723731 /// XM_006723732 /// XM_006723733 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from sequence or structural similarity /// 0035359 // negative regulation of peroxisome proliferator activated receptor signaling pathway // inferred from sequence or structural similarity /// 0035522 // monoubiquitinated histone H2A deubiquitination // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0060348 // bone development // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0035517 // PR-DUB complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from sequence or structural similarity /// 0042975 // peroxisome proliferator activated receptor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 52.53 </td> <td> 81.14 </td> <td> 5.57 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202883_s_at </td> <td> 202883_s_at </td> <td> T79584 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:T79584 /FEA=EST /DB_XREF=gi:698093 /DB_XREF=est:yd71a11.s1 /CLONE=IMAGE:113660 /UG=Hs.108705 protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform /FL=gb:NM_002716.1 gb:AF163473.1 gb:M65254.1 gb:AF087438.1 </td> <td> T79584 </td> <td> protein phosphatase 2, regulatory subunit A, beta </td> <td> PPP2R1B </td> <td> 5519 </td> <td> NM_001177562 /// NM_001177563 /// NM_002716 /// NM_181699 /// NM_181700 /// XM_006718867 /// XM_006718868 /// XM_006718869 /// XM_006718870 /// XM_006718871 /// XM_006718872 </td> <td> 0060561 // apoptotic process involved in morphogenesis // inferred from mutant phenotype /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype </td> <td> 0045121 // membrane raft // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 58.35 </td> <td> 141.72 </td> <td> 5.57 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201231_s_at </td> <td> 201231_s_at </td> <td> NM_001428 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001428.1 /DEF=Homo sapiens enolase 1, (alpha) (ENO1), mRNA. /FEA=mRNA /GEN=ENO1 /PROD=enolase 1, (alpha) /DB_XREF=gi:4503570 /UG=Hs.254105 enolase 1, (alpha) /FL=gb:BC001810.1 gb:BC004458.1 gb:M14328.1 gb:NM_001428.1 </td> <td> NM_001428 </td> <td> enolase 1, (alpha) </td> <td> ENO1 </td> <td> 2023 </td> <td> NM_001201483 /// NM_001428 /// XM_006710433 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0000015 // phosphopyruvate hydratase complex // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031305 // integral component of mitochondrial inner membrane // inferred from electronic annotation /// 0031430 // M band // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0004634 // phosphopyruvate hydratase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016829 // lyase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -617.35 </td> <td> 1934.30 </td> <td> -5.56 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 205963_s_at </td> <td> 205963_s_at </td> <td> NM_005147 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005147.1 /DEF=Homo sapiens tumorous imaginal discs (Drosophila) homolog (TID1), mRNA.  /FEA=mRNA /GEN=TID1 /PROD=tumorous imaginal discs (Drosophila) homolog /DB_XREF=gi:4827025 /UG=Hs.311057 DnaJ (Hsp40) homolog, subfamily A, member 3 /FL=gb:AF061749.1 gb:NM_005147.1 </td> <td> NM_005147 </td> <td> DnaJ (Hsp40) homolog, subfamily A, member 3 </td> <td> DNAJA3 </td> <td> 9093 </td> <td> NM_001135110 /// NM_001286516 /// NM_005147 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006264 // mitochondrial DNA replication // inferred from electronic annotation /// 0006457 // protein folding // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006924 // activation-induced cell death of T cells // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007528 // neuromuscular junction development // inferred from direct assay /// 0007569 // cell aging // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009408 // response to heat // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay /// 0060336 // negative regulation of interferon-gamma-mediated signaling pathway // inferred from direct assay /// 0071340 // skeletal muscle acetylcholine-gated channel clustering // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // inferred from mutant phenotype /// 0005884 // actin filament // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008385 // IkappaB kinase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019897 // extrinsic component of plasma membrane // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from sequence or structural similarity /// 0033256 // I-kappaB/NF-kappaB complex // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity </td> <td> 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005133 // interferon-gamma receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030544 // Hsp70 protein binding // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051059 // NF-kappaB binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 63.83 </td> <td> 156.56 </td> <td> 5.56 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201008_s_at </td> <td> 201008_s_at </td> <td> AA812232 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA812232 /FEA=EST /DB_XREF=gi:2881843 /DB_XREF=est:ob84h09.s1 /CLONE=IMAGE:1338113 /UG=Hs.179526 upregulated by 1,25-dihydroxyvitamin D-3 /FL=gb:NM_006472.1 gb:S73591.1 </td> <td> AA812232 </td> <td> thioredoxin interacting protein </td> <td> TXNIP </td> <td> 10628 </td> <td> NM_006472 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from direct assay /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051782 // negative regulation of cell division // inferred from direct assay /// 0071228 // cellular response to tumor cell // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> -132.22 </td> <td> 97.54 </td> <td> -5.55 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203607_at </td> <td> 203607_at </td> <td> NM_014937 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014937.1 /DEF=Homo sapiens KIAA0966 protein (KIAA0966), mRNA. /FEA=mRNA /GEN=KIAA0966 /PROD=KIAA0966 protein /DB_XREF=gi:7662413 /UG=Hs.52463 KIAA0966 protein /FL=gb:AF113227.1 gb:AB023183.1 gb:NM_014937.1 </td> <td> NM_014937 </td> <td> inositol polyphosphate-5-phosphatase F </td> <td> INPP5F </td> <td> 22876 </td> <td> NM_001243194 /// NM_001243195 /// NM_014937 /// XM_006717719 /// XM_006717720 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0014898 // cardiac muscle hypertrophy in response to stress // inferred from electronic annotation /// 0031161 // phosphatidylinositol catabolic process // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0051896 // regulation of protein kinase B signaling // inferred from electronic annotation </td> <td>  </td> <td> 0016787 // hydrolase activity // inferred from electronic annotation /// 0042578 // phosphoric ester hydrolase activity // inferred from electronic annotation </td> <td> 71.38 </td> <td> 105.79 </td> <td> 5.55 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202850_at </td> <td> 202850_at </td> <td> NM_002858 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002858.2 /DEF=Homo sapiens ATP-binding cassette, sub-family D (ALD), member 3 (ABCD3), mRNA.  /FEA=mRNA /GEN=ABCD3 /PROD=ATP-binding cassette, sub-family D, member 3 /DB_XREF=gi:10947125 /UG=Hs.76781 ATP-binding cassette, sub-family D (ALD), member 3 /FL=gb:NM_002858.2 gb:M81182.1 </td> <td> NM_002858 </td> <td> ATP-binding cassette, sub-family D (ALD), member 3 </td> <td> ABCD3 </td> <td> 5825 </td> <td> NM_001122674 /// NM_002858 /// XM_005271088 /// XM_005271089 /// XM_006710802 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from genetic interaction /// 0006810 // transport // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from direct assay /// 0007031 // peroxisome organization // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0042760 // very long-chain fatty acid catabolic process // inferred from genetic interaction /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // traceable author statement /// 0005782 // peroxisomal matrix // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016887 // ATPase activity // inferred from direct assay /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> 90.65 </td> <td> 135.75 </td> <td> 5.55 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212485_at </td> <td> 212485_at </td> <td> AU146596 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU146596 /FEA=EST /DB_XREF=gi:11008117 /DB_XREF=est:AU146596 /CLONE=HEMBB1000938 /UG=Hs.105749 KIAA0553 protein </td> <td> AU146596 </td> <td> G patch domain containing 8 </td> <td> GPATCH8 </td> <td> 23131 </td> <td> NM_001002909 /// NR_036474 /// XM_006721781 /// XM_006721782 /// XM_006721783 </td> <td>  </td> <td>  </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 47.55 </td> <td> 101.12 </td> <td> 5.54 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218067_s_at </td> <td> 218067_s_at </td> <td> NM_018011 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018011.1 /DEF=Homo sapiens hypothetical protein FLJ10154 (FLJ10154), mRNA. /FEA=mRNA /GEN=FLJ10154 /PROD=hypothetical protein FLJ10154 /DB_XREF=gi:8922258 /UG=Hs.179972 hypothetical protein FLJ10154 /FL=gb:NM_018011.1 </td> <td> NM_018011 </td> <td> arginine and glutamate rich 1 </td> <td> ARGLU1 </td> <td> 55082 </td> <td> NM_018011 /// XR_243043 /// XR_429268 /// XR_429269 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 158.22 </td> <td> 180.41 </td> <td> 5.54 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218351_at </td> <td> 218351_at </td> <td> NM_017845 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017845.1 /DEF=Homo sapiens hypothetical protein FLJ20502 (FLJ20502), mRNA. /FEA=mRNA /GEN=FLJ20502 /PROD=hypothetical protein FLJ20502 /DB_XREF=gi:8923457 /UG=Hs.23956 hypothetical protein FLJ20502 /FL=gb:AF182421.1 gb:NM_017845.1 </td> <td> NM_017845 </td> <td> COMM domain containing 8 </td> <td> COMMD8 </td> <td> 54951 </td> <td> NM_017845 /// XM_006714019 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 123.07 </td> <td> 350.24 </td> <td> 5.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212397_at </td> <td> 212397_at </td> <td> AL137751 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL137751.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434I0812 (from clone DKFZp434I0812); partial cds.  /FEA=mRNA /GEN=DKFZp434I0812 /PROD=hypothetical protein /DB_XREF=gi:6808387 /UG=Hs.263671 Homo sapiens mRNA; cDNA DKFZp434I0812 (from clone DKFZp434I0812); partial cds </td> <td> AL137751 </td> <td> radixin </td> <td> RDX </td> <td> 5962 </td> <td> NM_001260492 /// NM_001260493 /// NM_001260494 /// NM_001260495 /// NM_001260496 /// NM_002906 </td> <td> 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from genetic interaction /// 0030033 // microvillus assembly // inferred from electronic annotation /// 0045176 // apical protein localization // inferred from electronic annotation /// 0051693 // actin filament capping // inferred from electronic annotation /// 0061028 // establishment of endothelial barrier // inferred from genetic interaction </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005902 // microvillus // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032420 // stereocilium // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0051286 // cell tip // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -238.95 </td> <td> 693.73 </td> <td> -5.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218290_at </td> <td> 218290_at </td> <td> NM_018049 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018049.1 /DEF=Homo sapiens hypothetical protein FLJ10297 (FLJ10297), mRNA. /FEA=mRNA /GEN=FLJ10297 /PROD=hypothetical protein FLJ10297 /DB_XREF=gi:8922332 /UG=Hs.173739 hypothetical protein FLJ10297 /FL=gb:BC003084.1 gb:NM_018049.1 </td> <td> NM_018049 </td> <td> microRNA 6789 /// pleckstrin homology domain containing, family J member 1 </td> <td> MIR6789 /// PLEKHJ1 </td> <td> 55111 /// 102466736 </td> <td> NM_018049 /// NR_106847 /// XM_005259591 /// XM_006722784 </td> <td>  </td> <td>  </td> <td> 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> 58.48 </td> <td> 89.41 </td> <td> 5.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218263_s_at </td> <td> 218263_s_at </td> <td> NM_021211 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021211.1 /DEF=Homo sapiens transposon-derived Buster1 transposase-like protein (LOC58486), mRNA.  /FEA=mRNA /GEN=LOC58486 /PROD=transposon-derived Buster1 transposase-likeprotein /DB_XREF=gi:10864022 /UG=Hs.25726 transposon-derived Buster1 transposase-like protein /FL=gb:NM_021211.1 gb:AF205600.1 </td> <td> NM_021211 </td> <td> zinc finger, BED-type containing 5 </td> <td> ZBED5 </td> <td> 58486 </td> <td> NM_001143667 /// NM_021211 </td> <td>  </td> <td>  </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 67.73 </td> <td> 100.39 </td> <td> 5.53 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 215706_x_at </td> <td> 215706_x_at </td> <td> BC002323 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BC002323.1 /DEF=Homo sapiens, Similar to thyroid hormone receptor interactor 6, clone IMAGE:3504464, mRNA, partial cds.  /FEA=mRNA /PROD=Similar to thyroid hormone receptor interactor6 /DB_XREF=gi:12803044 /UG=Hs.75873 zyxin </td> <td> BC002323 </td> <td> zyxin </td> <td> ZYX </td> <td> 7791 </td> <td> NM_001010972 /// NM_003461 /// XM_005250052 /// XM_005250053 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 180.30 </td> <td> 683.23 </td> <td> 5.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212648_at </td> <td> 212648_at </td> <td> AL079292 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL079292.1 /DEF=Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 48814. /FEA=mRNA /PROD=hypothetical protein, similar to (AC007017)putative RNA helicase A Arabidopsis thaliana /DB_XREF=gi:5102732 /UG=Hs.95665 hypothetical protein </td> <td> AL079292 </td> <td> DEAH (Asp-Glu-Ala-His) box polypeptide 29 </td> <td> DHX29 </td> <td> 54505 </td> <td> NM_019030 /// XM_005248544 /// XM_006714653 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016282 // eukaryotic 43S preinitiation complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043024 // ribosomal small subunit binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 85.75 </td> <td> 117.08 </td> <td> 5.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 216526_x_at </td> <td> 216526_x_at </td> <td> AK024836 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024836.1 /DEF=Homo sapiens cDNA: FLJ21183 fis, clone CAS11634, highly similar to HSHLACW07 Homo sapiens mRNA for human leukocyte antigen C alpha chain.  /FEA=mRNA /DB_XREF=gi:10437242 /UG=Hs.277477 major histocompatibility complex, class I, C </td> <td> AK024836 </td> <td> major histocompatibility complex, class I, C </td> <td> HLA-C </td> <td> 3107 </td> <td> NM_001243042 /// NM_002117 </td> <td> 0001539 // cilium or flagellum-dependent cell motility // non-traceable author statement /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002486 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent // inferred from direct assay /// 0006955 // immune response // non-traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005102 // receptor binding // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0032395 // MHC class II receptor activity // non-traceable author statement /// 0042605 // peptide antigen binding // not recorded /// 0042605 // peptide antigen binding // inferred from direct assay /// 0042605 // peptide antigen binding // inferred from sequence or structural similarity /// 0046977 // TAP binding // inferred from direct assay </td> <td> -397.75 </td> <td> 1010.20 </td> <td> -5.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200036_s_at </td> <td> 200036_s_at </td> <td> NM_007104 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007104.2 /DEF=Homo sapiens ribosomal protein L10a (RPL10A), mRNA. /FEA=mRNA /GEN=RPL10A /PROD=ribosomal protein L10a /DB_XREF=gi:6325471 /UG=Hs.252574 ribosomal protein L10a /FL=gb:U12404.1 gb:NM_007104.2 </td> <td> NM_007104 </td> <td> ribosomal protein L10a </td> <td> RPL10A </td> <td> 4736 </td> <td> NM_007104 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015934 // large ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -380.83 </td> <td> 1527.01 </td> <td> -5.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212633_at </td> <td> 212633_at </td> <td> AL132776 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL132776 /DEF=Human DNA sequence from clone RP3-393D12 on chromosome 6q16.1-16.3. Contains the 3 end of the gene KIAA0776, the gene for a novel LIM domain protein, ESTs, STSs and GSSs /FEA=mRNA_2 /DB_XREF=gi:6706246 /UG=Hs.5460 KIAA0776 protein </td> <td> AL132776 </td> <td> UFM1-specific ligase 1 </td> <td> UFL1 </td> <td> 23376 </td> <td> NM_015323 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0071569 // protein ufmylation // inferred from direct assay /// 0071569 // protein ufmylation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0071568 // UFM1 conjugating enzyme activity // inferred from direct assay </td> <td> 69.10 </td> <td> 95.22 </td> <td> 5.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218812_s_at </td> <td> 218812_s_at </td> <td> NM_025156 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025156.1 /DEF=Homo sapiens hypothetical protein FLJ12474 (FLJ12474), mRNA. /FEA=mRNA /GEN=FLJ12474 /PROD=hypothetical protein FLJ12474 /DB_XREF=gi:13376752 /UG=Hs.289053 hypothetical protein FLJ12474 /FL=gb:NM_025156.1 </td> <td> NM_025156 </td> <td> ORAI calcium release-activated calcium modulator 2 </td> <td> ORAI2 </td> <td> 80228 </td> <td> NM_001126340 /// NM_001271818 /// NM_001271819 /// NM_032831 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 74.25 </td> <td> 86.67 </td> <td> 5.52 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 214259_s_at </td> <td> 214259_s_at </td> <td> AI144075 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI144075 /FEA=EST /DB_XREF=gi:3665884 /DB_XREF=est:qi63e12.x1 /CLONE=IMAGE:1861198 /UG=Hs.6980 aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) </td> <td> AI144075 </td> <td> aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) </td> <td> AKR7A2 </td> <td> 8574 </td> <td> NM_003689 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006081 // cellular aldehyde metabolic process // traceable author statement /// 0044597 // daunorubicin metabolic process // inferred from mutant phenotype /// 0044598 // doxorubicin metabolic process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004032 // alditol:NADP+ 1-oxidoreductase activity // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019119 // phenanthrene-9,10-epoxide hydrolase activity // inferred from direct assay </td> <td> 84.82 </td> <td> 189.36 </td> <td> 5.51 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 219202_at </td> <td> 219202_at </td> <td> NM_024599 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024599.1 /DEF=Homo sapiens hypothetical protein FLJ22341 (FLJ22341), mRNA. /FEA=mRNA /GEN=FLJ22341 /PROD=hypothetical protein FLJ22341 /DB_XREF=gi:13375798 /UG=Hs.25485 hypothetical protein FLJ22341 /FL=gb:NM_024599.1 </td> <td> NM_024599 </td> <td> rhomboid 5 homolog 2 (Drosophila) </td> <td> RHBDF2 </td> <td> 79651 </td> <td> NM_001005498 /// NM_024599 /// XM_005257669 /// XM_005257670 /// XM_005257672 /// XM_006722079 /// XM_006722080 /// XM_006722081 /// XM_006722082 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0050709 // negative regulation of protein secretion // inferred from sequence or structural similarity </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation </td> <td> -88.88 </td> <td> 125.86 </td> <td> -5.50 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201326_at </td> <td> 201326_at </td> <td> BE737030 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE737030 /FEA=EST /DB_XREF=gi:10151022 /DB_XREF=est:601304610F1 /CLONE=IMAGE:3639098 /UG=Hs.82916 chaperonin containing TCP1, subunit 6A (zeta 1) /FL=gb:M94083.1 gb:NM_001762.1 gb:L27706.1 </td> <td> BE737030 </td> <td> chaperonin containing TCP1, subunit 6A (zeta 1) </td> <td> CCT6A </td> <td> 908 </td> <td> NM_001009186 /// NM_001762 </td> <td> 0006457 // protein folding // traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0002199 // zona pellucida receptor complex // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 102.88 </td> <td> 235.44 </td> <td> 5.50 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201009_s_at </td> <td> 201009_s_at </td> <td> AI439556 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI439556 /FEA=EST /DB_XREF=gi:4305149 /DB_XREF=est:tc90c12.x1 /CLONE=IMAGE:2073430 /UG=Hs.179526 upregulated by 1,25-dihydroxyvitamin D-3 /FL=gb:NM_006472.1 gb:S73591.1 </td> <td> AI439556 </td> <td> thioredoxin interacting protein </td> <td> TXNIP </td> <td> 10628 </td> <td> NM_006472 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from direct assay /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051782 // negative regulation of cell division // inferred from direct assay /// 0071228 // cellular response to tumor cell // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> -156.15 </td> <td> 167.78 </td> <td> -5.50 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208697_s_at </td> <td> 208697_s_at </td> <td> BC000734 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000734.1 /DEF=Homo sapiens, eukaryotic translation initiation factor 3, subunit 6 (48kD), clone MGC:2060, mRNA, complete cds.  /FEA=mRNA /PROD=eukaryotic translation initiation factor 3,subunit 6 (48kD) /DB_XREF=gi:12653884 /UG=Hs.106673 eukaryotic translation initiation factor 3, subunit 6 (48kD) /FL=gb:BC000734.1 gb:U62962.1 gb:U54562.1 gb:U85947.1 gb:U94175.1 gb:NM_001568.1 </td> <td> BC000734 </td> <td> eukaryotic translation initiation factor 3, subunit E </td> <td> EIF3E </td> <td> 3646 </td> <td> NM_001568 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045947 // negative regulation of translational initiation // non-traceable author statement </td> <td> 0000785 // chromatin // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -413.20 </td> <td> 1611.80 </td> <td> -5.49 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 204369_at </td> <td> 204369_at </td> <td> NM_006218 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006218.1 /DEF=Homo sapiens phosphoinositide-3-kinase, catalytic, alpha polypeptide (PIK3CA), mRNA.  /FEA=mRNA /GEN=PIK3CA /PROD=phosphoinositide-3-kinase, catalytic, alphapolypeptide /DB_XREF=gi:5453891 /UG=Hs.85701 phosphoinositide-3-kinase, catalytic, alpha polypeptide /FL=gb:U79143.1 gb:NM_006218.1 </td> <td> NM_006218 </td> <td> phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha </td> <td> PIK3CA </td> <td> 5290 </td> <td> NM_006218 /// XM_006713658 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001944 // vasculature development // traceable author statement /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from direct assay /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from electronic annotation /// 0038028 // insulin receptor signaling pathway via phosphatidylinositol 3-kinase // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043491 // protein kinase B signaling // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043542 // endothelial cell migration // traceable author statement /// 0044029 // hypomethylation of CpG island // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from sequence or structural similarity /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0060048 // cardiac muscle contraction // traceable author statement /// 2000270 // negative regulation of fibroblast apoptotic process // inferred from electronic annotation /// 2000653 // regulation of genetic imprinting // inferred from electronic annotation /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype </td> <td> 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // not recorded /// 0005942 // phosphatidylinositol 3-kinase complex // inferred from sequence or structural similarity /// 0005943 // 1-phosphatidylinositol-4-phosphate 3-kinase, class IA complex // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // traceable author statement /// 0016303 // 1-phosphatidylinositol-3-kinase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0030295 // protein kinase activator activity // inferred from electronic annotation /// 0035004 // phosphatidylinositol 3-kinase activity // inferred from sequence or structural similarity /// 0035004 // phosphatidylinositol 3-kinase activity // traceable author statement /// 0035005 // 1-phosphatidylinositol-4-phosphate 3-kinase activity // not recorded /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation /// 0046934 // phosphatidylinositol-4,5-bisphosphate 3-kinase activity // traceable author statement </td> <td> -53.40 </td> <td> 89.50 </td> <td> -5.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201067_at </td> <td> 201067_at </td> <td> BF215487 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF215487 /FEA=EST /DB_XREF=gi:11109176 /DB_XREF=est:601881048F1 /CLONE=IMAGE:4093691 /UG=Hs.61153 proteasome (prosome, macropain) 26S subunit, ATPase, 2 /FL=gb:BC002589.1 gb:D11094.1 gb:NM_002803.1 </td> <td> BF215487 </td> <td> proteasome (prosome, macropain) 26S subunit, ATPase, 2 </td> <td> PSMC2 </td> <td> 5701 </td> <td> NM_001204453 /// NM_002803 /// XM_005250505 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> 58.85 </td> <td> 92.33 </td> <td> 5.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202695_s_at </td> <td> 202695_s_at </td> <td> NM_004760 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004760.1 /DEF=Homo sapiens serinethreonine kinase 17a (apoptosis-inducing) (STK17A), mRNA.  /FEA=mRNA /GEN=STK17A /PROD=serinethreonine kinase 17a(apoptosis-inducing) /DB_XREF=gi:4758191 /UG=Hs.9075 serinethreonine kinase 17a (apoptosis-inducing) /FL=gb:AB011420.1 gb:NM_004760.1 </td> <td> NM_004760 </td> <td> serine/threonine kinase 17a </td> <td> STK17A </td> <td> 9263 </td> <td> NM_004760 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 2000271 // positive regulation of fibroblast apoptotic process // inferred from mutant phenotype /// 2000377 // regulation of reactive oxygen species metabolic process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 65.90 </td> <td> 119.97 </td> <td> 5.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 204767_s_at </td> <td> 204767_s_at </td> <td> BC000323 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000323.1 /DEF=Homo sapiens, flap structure-specific endonuclease 1, clone MGC:8478, mRNA, complete cds.  /FEA=mRNA /PROD=flap structure-specific endonuclease 1 /DB_XREF=gi:12653112 /UG=Hs.4756 flap structure-specific endonuclease 1 /FL=gb:BC000323.1 gb:NM_004111.3 </td> <td> BC000323 </td> <td> flap structure-specific endonuclease 1 </td> <td> FEN1 </td> <td> 2237 </td> <td> NM_004111 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0000737 // DNA catabolic process, endonucleolytic // inferred from direct assay /// 0000737 // DNA catabolic process, endonucleolytic // inferred from electronic annotation /// 0000737 // DNA catabolic process, endonucleolytic // inferred from mutant phenotype /// 0000738 // DNA catabolic process, exonucleolytic // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009650 // UV protection // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0043137 // DNA replication, removal of RNA primer // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // traceable author statement /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003684 // damaged DNA binding // traceable author statement /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // traceable author statement /// 0004523 // RNA-DNA hybrid ribonuclease activity // inferred from direct assay /// 0004527 // exonuclease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008309 // double-stranded DNA exodeoxyribonuclease activity // traceable author statement /// 0008409 // 5'-3' exonuclease activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0017108 // 5'-flap endonuclease activity // inferred from direct assay /// 0017108 // 5'-flap endonuclease activity // inferred from mutant phenotype /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048256 // flap endonuclease activity // inferred from electronic annotation </td> <td> 109.58 </td> <td> 116.59 </td> <td> 5.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 216033_s_at </td> <td> 216033_s_at </td> <td> S74774 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:S74774.1 /DEF=p59fyn(T)=OKT3-induced calcium influx regulator human, Jurkat J6 T cell line, mRNA Partial, 1605 nt.  /FEA=CDS /PROD=tyrosine kinase p59fyn(T) /DB_XREF=gi:802050 /UG=Hs.169370 FYN oncogene related to SRC, FGR, YES </td> <td> S74774 </td> <td> FYN proto-oncogene, Src family tyrosine kinase </td> <td> FYN </td> <td> 2534 </td> <td> NM_001242779 /// NM_002037 /// NM_153047 /// NM_153048 /// XM_005266887 /// XM_005266888 /// XM_005266889 /// XM_005266890 /// XM_005266892 /// XM_006715429 </td> <td> 0001764 // neuron migration // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006816 // calcium ion transport // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007612 // learning // traceable author statement /// 0007631 // feeding behavior // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030900 // forebrain development // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0050798 // activated T cell proliferation // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0050966 // detection of mechanical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 1900182 // positive regulation of protein localization to nucleus // inferred from electronic annotation /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from physical interaction /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // non-traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042608 // T cell receptor binding // inferred from electronic annotation /// 0042609 // CD4 receptor binding // inferred from electronic annotation /// 0042610 // CD8 receptor binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0051428 // peptide hormone receptor binding // inferred from electronic annotation /// 0070851 // growth factor receptor binding // inferred from physical interaction </td> <td> -73.57 </td> <td> 180.21 </td> <td> -5.48 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 36711_at </td> <td> 36711_at </td> <td> AL021977 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AL021977:bK447C4.1 (novel MAFF (v-maf musculoaponeurotic fibrosarcoma (avian) oncogene family, protein F) LIKE protein) /cds=(0,494) /gb=AL021977 /gi=4914526 /ug=Hs.51305 /len=2128 </td> <td> AL021977 </td> <td> v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F </td> <td> MAFF </td> <td> 23764 </td> <td> NM_001161572 /// NM_001161573 /// NM_001161574 /// NM_012323 /// NM_152878 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007567 // parturition // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation /// 0045604 // regulation of epidermal cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 338.38 </td> <td> 839.39 </td> <td> 5.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212131_at </td> <td> 212131_at </td> <td> BG054966 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG054966 /FEA=EST /DB_XREF=gi:12512220 /DB_XREF=est:nac93b07.x1 /CLONE=IMAGE:3441756 /UG=Hs.8258 DKFZP434D1335 protein </td> <td> BG054966 </td> <td> LSM14A, SCD6 homolog A (S. cerevisiae) </td> <td> LSM14A </td> <td> 26065 </td> <td> NM_001114093 /// NM_015578 /// XM_005258719 /// XM_005258720 /// XM_005258721 /// XM_005276948 /// XM_005276949 /// XM_005276950 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from direct assay /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from mutant phenotype /// 0039529 // RIG-I signaling pathway // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0060340 // positive regulation of type I interferon-mediated signaling pathway // inferred from electronic annotation </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 72.20 </td> <td> 192.12 </td> <td> 5.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200669_s_at </td> <td> 200669_s_at </td> <td> NM_003340 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003340.1 /DEF=Homo sapiens ubiquitin-conjugating enzyme E2D 3 (homologous to yeast UBC45) (UBE2D3), mRNA.  /FEA=mRNA /GEN=UBE2D3 /PROD=ubiquitin-conjugating enzyme E2D 3 (homologousto yeast UBC45) /DB_XREF=gi:4507776 /UG=Hs.118797 ubiquitin-conjugating enzyme E2D 3 (homologous to yeast UBC45) /FL=gb:U39318.1 gb:BC003395.1 gb:NM_003340.1 </td> <td> NM_003340 </td> <td> ubiquitin-conjugating enzyme E2D 3 </td> <td> UBE2D3 </td> <td> 7323 </td> <td> NM_003340 /// NM_181886 /// NM_181887 /// NM_181888 /// NM_181889 /// NM_181890 /// NM_181891 /// NM_181892 /// NM_181893 /// XM_005263200 /// XM_005263205 /// XM_006714297 /// XM_006714298 /// XM_006714299 /// XM_006714300 /// XM_006714301 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030509 // BMP signaling pathway // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0071456 // cellular response to hypoxia // traceable author statement </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> -221.10 </td> <td> 647.10 </td> <td> -5.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218399_s_at </td> <td> 218399_s_at </td> <td> NM_017955 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017955.1 /DEF=Homo sapiens hypothetical protein FLJ20764 (FLJ20764), mRNA. /FEA=mRNA /GEN=FLJ20764 /PROD=hypothetical protein FLJ20764 /DB_XREF=gi:8923673 /UG=Hs.34045 hypothetical protein FLJ20764 /FL=gb:NM_017955.1 </td> <td> NM_017955 </td> <td> cell division cycle associated 4 </td> <td> CDCA4 </td> <td> 55038 </td> <td> NM_017955 /// NM_145701 </td> <td> 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 92.20 </td> <td> 193.20 </td> <td> 5.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212264_s_at </td> <td> 212264_s_at </td> <td> BE645850 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE645850 /FEA=EST /DB_XREF=gi:9970161 /DB_XREF=est:7e77c03.x1 /CLONE=IMAGE:3288484 /UG=Hs.154978 KIAA0261 protein </td> <td> BE645850 </td> <td> wings apart-like homolog (Drosophila) </td> <td> WAPAL </td> <td> 23063 </td> <td> NM_015045 /// XM_006717726 /// XM_006717727 /// XM_006717728 /// XM_006717729 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0035562 // negative regulation of chromatin binding // inferred from mutant phenotype /// 0045875 // negative regulation of sister chromatid cohesion // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0071168 // protein localization to chromatin // inferred from mutant phenotype /// 0071922 // regulation of cohesin localization to chromatin // inferred from mutant phenotype </td> <td> 0000775 // chromosome, centromeric region // traceable author statement /// 0000785 // chromatin // inferred from direct assay /// 0000795 // synaptonemal complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008278 // cohesin complex // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -116.70 </td> <td> 187.40 </td> <td> -5.47 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202048_s_at </td> <td> 202048_s_at </td> <td> NM_014292 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014292.1 /DEF=Homo sapiens chromobox homolog 6 (CBX6), mRNA. /FEA=mRNA /GEN=CBX6 /PROD=chromobox homolog 6 /DB_XREF=gi:10140848 /UG=Hs.107374 chromobox homolog 6 /FL=gb:NM_014292.1 </td> <td> NM_014292 </td> <td> chromobox homolog 6 </td> <td> CBX6 </td> <td> 23466 </td> <td> NM_014292 /// XM_005261412 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation </td> <td> 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0031519 // PcG protein complex // inferred from direct assay </td> <td> 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 94.25 </td> <td> 61.20 </td> <td> 5.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203404_at </td> <td> 203404_at </td> <td> NM_014782 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014782.1 /DEF=Homo sapiens KIAA0512 gene product (KIAA0512), mRNA. /FEA=mRNA /GEN=KIAA0512 /PROD=KIAA0512 gene product /DB_XREF=gi:7662161 /UG=Hs.48924 KIAA0512 gene product; ALEX2 /FL=gb:AB011084.1 gb:NM_014782.1 </td> <td> NM_014782 </td> <td> armadillo repeat containing, X-linked 2 </td> <td> ARMCX2 </td> <td> 9823 </td> <td> NM_001282231 /// NM_014782 /// NM_177949 /// XM_005278109 /// XM_005278110 /// XM_005278111 /// XM_005278113 /// XM_005278114 /// XM_005278115 /// XM_005278116 /// XM_005278117 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 94.43 </td> <td> 165.36 </td> <td> 5.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200937_s_at </td> <td> 200937_s_at </td> <td> NM_000969 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000969.1 /DEF=Homo sapiens ribosomal protein L5 (RPL5), mRNA. /FEA=mRNA /GEN=RPL5 /PROD=ribosomal protein L5 /DB_XREF=gi:4506654 /UG=Hs.180946 ribosomal protein L5 /FL=gb:AF113210.1 gb:NM_000969.1 gb:U14966.1 </td> <td> NM_000969 </td> <td> ribosomal protein L5 /// small nucleolar RNA, C/D box 21 </td> <td> RPL5 /// SNORD21 </td> <td> 6083 /// 6125 </td> <td> NM_000969 /// NR_000006 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042273 // ribosomal large subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008097 // 5S rRNA binding // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -381.30 </td> <td> 2153.10 </td> <td> -5.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218176_at </td> <td> 218176_at </td> <td> NM_022149 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022149.1 /DEF=Homo sapiens MAGEF1 protein (MAGEF1), mRNA. /FEA=mRNA /GEN=MAGEF1 /PROD=MAGEF1 protein /DB_XREF=gi:11545891 /UG=Hs.306123 MAGEF1 protein /FL=gb:AF295378.1 gb:NM_022149.1 </td> <td> NM_022149 </td> <td> melanoma antigen family F, 1 </td> <td> MAGEF1 </td> <td> 64110 </td> <td> NM_022149 </td> <td>  </td> <td> 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> 52.62 </td> <td> 40.44 </td> <td> 5.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 211784_s_at </td> <td> 211784_s_at </td> <td> BC006181 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006181.1 /DEF=Homo sapiens, Similar to splicing factor, arginineserine-rich 2 (SC-35), clone MGC:2622, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to splicing factor, arginineserine-rich2 (SC-35) /DB_XREF=gi:13544106 /FL=gb:BC006181.1 </td> <td> BC006181 </td> <td> serine/arginine-rich splicing factor 1 </td> <td> SRSF1 </td> <td> 6426 </td> <td> NM_001078166 /// NM_006924 /// NR_034041 /// XM_006722012 /// XR_429911 /// XR_429912 /// XR_429999 /// XR_430000 /// XR_430001 /// XR_430002 /// XR_433418 /// XR_433419 /// XR_433420 /// XR_433421 /// XR_433422 </td> <td> 0000395 // mRNA 5'-splice site recognition // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0060048 // cardiac muscle contraction // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from physical interaction /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050733 // RS domain binding // inferred from electronic annotation </td> <td> 175.07 </td> <td> 401.44 </td> <td> 5.46 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 221804_s_at </td> <td> 221804_s_at </td> <td> BE565675 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE565675 /FEA=EST /DB_XREF=gi:9809395 /DB_XREF=est:601338460F1 /CLONE=IMAGE:3680703 /UG=Hs.267923 uncharacterized hypothalamus protein HT011 </td> <td> BE565675 </td> <td> family with sequence similarity 45, member A /// family with sequence similarity 45, member A pseudogene </td> <td> FAM45A /// FAM45B </td> <td> 55855 /// 404636 </td> <td> NM_018472 /// NM_207009 /// NR_027141 /// XM_005269833 /// XM_006717849 /// XM_006717850 /// XM_006717851 /// XM_006717852 </td> <td>  </td> <td>  </td> <td>  </td> <td> 62.10 </td> <td> 279.98 </td> <td> 5.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 213249_at </td> <td> 213249_at </td> <td> AU145127 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU145127 /FEA=EST /DB_XREF=gi:11006648 /DB_XREF=est:AU145127 /CLONE=HEMBA1003978 /UG=Hs.76798 f-box and leucine-rich repeat protein 7 /FL=gb:AF199356.1 gb:NM_012304.1 </td> <td> AU145127 </td> <td> F-box and leucine-rich repeat protein 7 </td> <td> FBXL7 </td> <td> 23194 </td> <td> NM_001278317 /// NM_012304 /// XM_005248273 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from sequence or structural similarity /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from sequence or structural similarity </td> <td> 0004842 // ubiquitin-protein transferase activity // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -72.87 </td> <td> 222.14 </td> <td> -5.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218412_s_at </td> <td> 218412_s_at </td> <td> NM_016328 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016328.1 /DEF=Homo sapiens GTF2I repeat domain-containing 1 (GTF2IRD1), mRNA. /FEA=mRNA /GEN=GTF2IRD1 /PROD=general transcription factor 3 /DB_XREF=gi:7705386 /UG=Hs.21075 GTF2I repeat domain-containing 1 /FL=gb:AF151354.1 gb:AF089107.1 gb:NM_016328.1 </td> <td> NM_016328 </td> <td> GTF2I repeat domain containing 1 </td> <td> GTF2IRD1 </td> <td> 9569 </td> <td> NM_001199207 /// NM_005685 /// NM_016328 /// XM_005250720 /// XM_005250721 /// XM_006716182 /// XM_006716183 /// XM_006716184 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // non-traceable author statement </td> <td> -56.00 </td> <td> 153.70 </td> <td> -5.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203505_at </td> <td> 203505_at </td> <td> AF285167 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF285167.1 /DEF=Homo sapiens ATP-binding cassette transporter 1 (ABCA1) mRNA, complete cds.  /FEA=mRNA /GEN=ABCA1 /PROD=ATP-binding cassette transporter 1 /DB_XREF=gi:9755158 /UG=Hs.211562 ATP-binding cassette, sub-family A (ABC1), member 1 /FL=gb:AF165281.1 gb:NM_005502.1 gb:AF285167.1 </td> <td> AF285167 </td> <td> ATP-binding cassette, sub-family A (ABC1), member 1 </td> <td> ABCA1 </td> <td> 19 </td> <td> NM_005502 /// XM_005251773 /// XM_005251774 /// XM_005251776 /// XM_005251778 /// XM_005251780 /// XM_006716995 </td> <td> 0002790 // peptide secretion // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006497 // protein lipidation // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006911 // phagocytosis, engulfment // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from direct assay /// 0010745 // negative regulation of macrophage derived foam cell differentiation // traceable author statement /// 0010875 // positive regulation of cholesterol efflux // inferred from electronic annotation /// 0010887 // negative regulation of cholesterol storage // traceable author statement /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from direct assay /// 0030301 // cholesterol transport // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from mutant phenotype /// 0032367 // intracellular cholesterol transport // inferred from mutant phenotype /// 0032489 // regulation of Cdc42 protein signal transduction // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from direct assay /// 0033344 // cholesterol efflux // inferred from mutant phenotype /// 0033700 // phospholipid efflux // inferred from direct assay /// 0033700 // phospholipid efflux // inferred from mutant phenotype /// 0034380 // high-density lipoprotein particle assembly // inferred from mutant phenotype /// 0034616 // response to laminar fluid shear stress // inferred from expression pattern /// 0038027 // apolipoprotein A-I-mediated signaling pathway // inferred from direct assay /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042158 // lipoprotein biosynthetic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0043691 // reverse cholesterol transport // inferred from mutant phenotype /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045332 // phospholipid translocation // inferred from electronic annotation /// 0050702 // interleukin-1 beta secretion // inferred from mutant phenotype /// 0055091 // phospholipid homeostasis // inferred from mutant phenotype /// 0055098 // response to low-density lipoprotein particle // inferred from expression pattern /// 0060155 // platelet dense granule organization // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005543 // phospholipid binding // inferred by curator /// 0005548 // phospholipid transporter activity // inferred from direct assay /// 0008509 // anion transmembrane transporter activity // inferred from sequence or structural similarity /// 0015485 // cholesterol binding // inferred by curator /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from direct assay /// 0019905 // syntaxin binding // inferred from physical interaction /// 0031267 // small GTPase binding // inferred from physical interaction /// 0034185 // apolipoprotein binding // inferred from physical interaction /// 0034186 // apolipoprotein A-I binding // inferred from physical interaction /// 0034188 // apolipoprotein A-I receptor activity // inferred from direct assay /// 0051117 // ATPase binding // inferred from physical interaction </td> <td> -48.48 </td> <td> 42.29 </td> <td> -5.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 213701_at </td> <td> 213701_at </td> <td> AW299245 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW299245 /FEA=EST /DB_XREF=gi:6708922 /DB_XREF=est:xs48d07.x1 /CLONE=IMAGE:2772877 /UG=Hs.62601 Homo sapiens mRNA; cDNA DKFZp586K1318 (from clone DKFZp586K1318) </td> <td> AW299245 </td> <td> chromosome 12 open reading frame 29 </td> <td> C12orf29 </td> <td> 91298 </td> <td> NM_001009894 </td> <td>  </td> <td>  </td> <td>  </td> <td> 43.73 </td> <td> 32.64 </td> <td> 5.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 204681_s_at </td> <td> 204681_s_at </td> <td> NM_012294 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012294.1 /DEF=Homo sapiens guanine nucleotide exchange factor for Rap1; M-Ras-regulated GEF (KIAA0277), mRNA.  /FEA=mRNA /GEN=KIAA0277 /PROD=guanine nucleotide exchange factor for Rap1;M-Ras-regulated GEF /DB_XREF=gi:6912455 /UG=Hs.80620 guanine nucleotide exchange factor for Rap1; M-Ras-regulated GEF /FL=gb:D87467.1 gb:NM_012294.1 </td> <td> NM_012294 </td> <td> Rap guanine nucleotide exchange factor (GEF) 5 </td> <td> RAPGEF5 </td> <td> 9771 </td> <td> NM_012294 /// XM_005249914 /// XM_005249915 /// XM_005249916 /// XM_005249917 /// XM_006715804 </td> <td> 0007264 // small GTPase mediated signal transduction // non-traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0032317 // regulation of Rap GTPase activity // inferred from direct assay /// 0032318 // regulation of Ras GTPase activity // traceable author statement /// 0032320 // positive regulation of Ras GTPase activity // traceable author statement /// 0032854 // positive regulation of Rap GTPase activity // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // traceable author statement /// 0017034 // Rap guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0030742 // GTP-dependent protein binding // inferred from physical interaction </td> <td> -55.10 </td> <td> 79.92 </td> <td> -5.45 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209384_at </td> <td> 209384_at </td> <td> AA176833 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA176833 /FEA=EST /DB_XREF=gi:1757965 /DB_XREF=est:zp34f11.s1 /CLONE=IMAGE:611373 /UG=Hs.301959 proline synthetase co-transcribed (bacterial homolog) /FL=gb:AL136616.1 </td> <td> AA176833 </td> <td> proline synthetase co-transcribed homolog (bacterial) </td> <td> PROSC </td> <td> 11212 </td> <td> NM_007198 /// XM_005273395 </td> <td> 1901605 // alpha-amino acid metabolic process // not recorded </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0030170 // pyridoxal phosphate binding // not recorded </td> <td> 74.00 </td> <td> 223.47 </td> <td> 5.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 55093_at </td> <td> 55093_at </td> <td> AA534198 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AA534198:nj21a11.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-993116 /clone_end=3' /gb=AA534198 /gi=2278214 /ug=Hs.86392 /len=603 </td> <td> AA534198 </td> <td> chondroitin polymerizing factor 2 </td> <td> CHPF2 </td> <td> 54480 </td> <td> NM_001284295 /// NM_019015 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation </td> <td> 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0050510 // N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity // inferred from electronic annotation </td> <td> 60.67 </td> <td> 153.91 </td> <td> 5.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 219035_s_at </td> <td> 219035_s_at </td> <td> NM_025126 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025126.1 /DEF=Homo sapiens hypothetical protein FLJ21786 (FLJ21786), mRNA. /FEA=mRNA /GEN=FLJ21786 /PROD=hypothetical protein FLJ21786 /DB_XREF=gi:13376704 /UG=Hs.316809 hypothetical protein FLJ21786 /FL=gb:NM_025126.1 </td> <td> NM_025126 </td> <td> ring finger protein 34, E3 ubiquitin protein ligase </td> <td> RNF34 </td> <td> 80196 </td> <td> NM_001256858 /// NM_025126 /// NM_194271 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 2001271 // negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 1901981 // phosphatidylinositol phosphate binding // inferred from direct assay </td> <td> 62.35 </td> <td> 214.38 </td> <td> 5.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218527_at </td> <td> 218527_at </td> <td> NM_017692 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017692.1 /DEF=Homo sapiens hypothetical protein FLJ20157 (FLJ20157), mRNA. /FEA=mRNA /GEN=FLJ20157 /PROD=hypothetical protein FLJ20157 /DB_XREF=gi:8923155 /UG=Hs.14394 hypothetical protein FLJ20157 /FL=gb:BC001628.1 gb:NM_017692.1 </td> <td> NM_017692 </td> <td> aprataxin </td> <td> APTX </td> <td> 54840 </td> <td> NM_001195248 /// NM_001195249 /// NM_001195250 /// NM_001195251 /// NM_001195252 /// NM_001195254 /// NM_017692 /// NM_175069 /// NM_175072 /// NM_175073 /// NR_036576 /// NR_036577 /// NR_036578 /// NR_036579 /// XM_006716791 /// XM_006716792 /// XR_428423 </td> <td> 0000012 // single strand break repair // inferred from direct assay /// 0000738 // DNA catabolic process, exonucleolytic // inferred from direct assay /// 0000738 // DNA catabolic process, exonucleolytic // inferred from electronic annotation /// 0006266 // DNA ligation // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from direct assay /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0042542 // response to hydrogen peroxide // inferred from direct assay /// 0098506 // polynucleotide 3' dephosphorylation // inferred from direct assay </td> <td> 0000785 // chromatin // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003684 // damaged DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008967 // phosphoglycolate phosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0033699 // DNA 5'-adenosine monophosphate hydrolase activity // inferred from direct assay /// 0046403 // polynucleotide 3'-phosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from physical interaction </td> <td> 56.72 </td> <td> 103.79 </td> <td> 5.44 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218649_x_at </td> <td> 218649_x_at </td> <td> NM_004713 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004713.1 /DEF=Homo sapiens serologically defined colon cancer antigen 1 (SDCCAG1), mRNA.  /FEA=mRNA /GEN=SDCCAG1 /PROD=serologically defined colon cancer antigen 1 /DB_XREF=gi:4759077 /UG=Hs.54900 serologically defined colon cancer antigen 1 /FL=gb:AF039687.1 gb:NM_004713.1 </td> <td> NM_004713 </td> <td> nuclear export mediator factor </td> <td> NEMF </td> <td> 9147 </td> <td> NM_004713 /// XM_005268199 /// XM_005268200 /// XM_005268201 /// XR_429334 </td> <td> 0044780 // bacterial-type flagellum assembly // inferred from electronic annotation /// 0051168 // nuclear export // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay </td> <td>  </td> <td> 87.17 </td> <td> 139.34 </td> <td> 5.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218456_at </td> <td> 218456_at </td> <td> NM_023925 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_023925.1 /DEF=Homo sapiens hypothetical protein FLJ22569 (FLJ22569), mRNA. /FEA=mRNA /GEN=FLJ22569 /PROD=hypothetical protein FLJ22569 /DB_XREF=gi:12965192 /UG=Hs.234355 hypothetical protein FLJ22569 /FL=gb:NM_023925.1 </td> <td> NM_023925 </td> <td> caprin family member 2 </td> <td> CAPRIN2 </td> <td> 65981 </td> <td> NM_001002259 /// NM_001206856 /// NM_023925 /// NM_032156 /// NR_038177 /// XM_006719137 /// XM_006719138 /// XM_006719139 /// XM_006719140 /// XM_006719141 /// XM_006719142 /// XM_006719143 /// XM_006719144 /// XM_006719145 /// XM_006719146 /// XM_006719147 /// XM_006719148 </td> <td> 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050775 // positive regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction </td> <td> 109.15 </td> <td> 143.85 </td> <td> 5.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209778_at </td> <td> 209778_at </td> <td> AF007217 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF007217.1 /DEF=Homo sapiens Trip230 mRNA, complete cds. /FEA=mRNA /GEN=Trip230 /PROD=Trip230 /DB_XREF=gi:2253416 /UG=Hs.85092 thyroid hormone receptor interactor 11 /FL=gb:NM_004239.1 gb:AF007217.1 </td> <td> AF007217 </td> <td> thyroid hormone receptor interactor 11 </td> <td> TRIP11 </td> <td> 9321 </td> <td> NM_004239 /// XM_005268213 /// XM_005268214 /// XM_005268215 /// XM_006720321 </td> <td> 0000042 // protein targeting to Golgi // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003713 // transcription coactivator activity // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -53.85 </td> <td> 61.52 </td> <td> -5.42 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200873_s_at </td> <td> 200873_s_at </td> <td> NM_006585 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006585.1 /DEF=Homo sapiens chaperonin containing TCP1, subunit 8 (theta) (CCT8), mRNA.  /FEA=mRNA /GEN=CCT8 /PROD=chaperonin containing TCP1, subunit 8 (theta) /DB_XREF=gi:6005726 /UG=Hs.15071 chaperonin containing TCP1, subunit 8 (theta) /FL=gb:D13627.1 gb:NM_006585.1 </td> <td> NM_006585 </td> <td> chaperonin containing TCP1, subunit 8 (theta) </td> <td> CCT8 </td> <td> 10694 </td> <td> NM_001282907 /// NM_001282908 /// NM_001282909 /// NM_006585 </td> <td> 0006200 // ATP catabolic process // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0002199 // zona pellucida receptor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0044297 // cell body // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0042623 // ATPase activity, coupled // traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 178.60 </td> <td> 808.77 </td> <td> 5.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 219099_at </td> <td> 219099_at </td> <td> NM_020375 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020375.1 /DEF=Homo sapiens chromosome 12 open reading frame 5 (C12ORF5), mRNA. /FEA=mRNA /GEN=C12ORF5 /PROD=chromosome 12 open reading frame 5 /DB_XREF=gi:9966848 /UG=Hs.24792 chromosome 12 open reading frame 5 /FL=gb:NM_020375.1 </td> <td> NM_020375 </td> <td> chromosome 12 open reading frame 5 </td> <td> C12orf5 </td> <td> 57103 </td> <td> NM_020375 /// XM_006718993 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0010666 // positive regulation of cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 1901525 // negative regulation of macromitophagy // inferred from electronic annotation /// 2000378 // negative regulation of reactive oxygen species metabolic process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004331 // fructose-2,6-bisphosphate 2-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 51.85 </td> <td> 223.85 </td> <td> 5.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 222244_s_at </td> <td> 222244_s_at </td> <td> AK000749 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK000749.1 /DEF=Homo sapiens cDNA FLJ20742 fis, clone HEP06891. /FEA=mRNA /DB_XREF=gi:7021031 /UG=Hs.52184 hypothetical protein FLJ20618 </td> <td> AK000749 </td> <td> taurine up-regulated 1 (non-protein coding) </td> <td> TUG1 </td> <td> 55000 </td> <td> NR_002323 /// NR_110492 /// NR_110493 </td> <td>  </td> <td>  </td> <td>  </td> <td> 131.85 </td> <td> 269.30 </td> <td> 5.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202548_s_at </td> <td> 202548_s_at </td> <td> NM_003899 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003899.1 /DEF=Homo sapiens PAK-interacting exchange factor beta (P85SPR), mRNA. /FEA=mRNA /GEN=P85SPR /PROD=PAK-interacting exchange factor beta /DB_XREF=gi:4505572 /UG=Hs.172813 PAK-interacting exchange factor beta /FL=gb:D63476.1 gb:NM_003899.1 </td> <td> NM_003899 </td> <td> Rho guanine nucleotide exchange factor (GEF) 7 </td> <td> ARHGEF7 </td> <td> 8874 </td> <td> NM_001113511 /// NM_001113512 /// NM_001113513 /// NM_003899 /// NM_145735 /// XM_005254085 /// XM_005254086 /// XM_005254087 /// XM_005254088 /// XM_005254089 /// XM_005254090 /// XM_005254091 /// XM_005254092 /// XM_005254093 /// XM_005254094 /// XM_005254095 /// XM_006719956 /// XM_006719957 /// XM_006719958 /// XM_006719959 /// XM_006719960 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from sequence or structural similarity /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> 60.75 </td> <td> 438.73 </td> <td> 5.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218754_at </td> <td> 218754_at </td> <td> NM_024654 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024654.1 /DEF=Homo sapiens hypothetical protein FLJ23323 (FLJ23323), mRNA. /FEA=mRNA /GEN=FLJ23323 /PROD=hypothetical protein FLJ23323 /DB_XREF=gi:13375902 /UG=Hs.59425 hypothetical protein FLJ23323 /FL=gb:NM_024654.1 </td> <td> NM_024654 </td> <td> nucleolar protein 9 </td> <td> NOL9 </td> <td> 79707 </td> <td> NM_024654 /// XM_005263493 </td> <td> 0000460 // maturation of 5.8S rRNA // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0051731 // polynucleotide 5'-hydroxyl-kinase activity // inferred from direct assay </td> <td> 74.78 </td> <td> 149.61 </td> <td> 5.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 177_at </td> <td> 177_at </td> <td> U38545 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> U38545 /FEATURE= /DEFINITION=HSU38545 Human ARF-activated phosphatidylcholine-specific phospholipase D1a (hPLD1) mRNA, complete cds </td> <td> U38545 </td> <td> phospholipase D1, phosphatidylcholine-specific </td> <td> PLD1 </td> <td> 5337 </td> <td> NM_001130081 /// NM_002662 /// XM_005247533 /// XM_005247534 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006654 // phosphatidic acid biosynthetic process // traceable author statement /// 0006655 // phosphatidylglycerol biosynthetic process // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004630 // phospholipase D activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0070290 // N-acylphosphatidylethanolamine-specific phospholipase D activity // inferred from electronic annotation </td> <td> -52.25 </td> <td> 93.72 </td> <td> -5.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 217751_at </td> <td> 217751_at </td> <td> NM_015917 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015917.1 /DEF=Homo sapiens glutathione S-transferase subunit 13 homolog (LOC51064), mRNA.  /FEA=mRNA /GEN=LOC51064 /PROD=glutathione S-transferase subunit 13 homolog /DB_XREF=gi:7705703 /UG=Hs.279952 glutathione S-transferase subunit 13 homolog /FL=gb:AL136938.1 gb:BC001231.1 gb:AF070657.1 gb:AF068287.1 gb:NM_015917.1 </td> <td> NM_015917 </td> <td> glutathione S-transferase kappa 1 </td> <td> GSTK1 </td> <td> 373156 </td> <td> NM_001143679 /// NM_001143680 /// NM_001143681 /// NM_015917 </td> <td> 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004364 // glutathione transferase activity // inferred from direct assay /// 0004602 // glutathione peroxidase activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 78.40 </td> <td> 160.97 </td> <td> 5.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202123_s_at </td> <td> 202123_s_at </td> <td> NM_005157 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005157.2 /DEF=Homo sapiens v-abl Abelson murine leukemia viral oncogene homolog 1 (ABL1), transcript variant a, mRNA.  /FEA=mRNA /GEN=ABL1 /PROD=v-abl Abelson murine leukemia viral oncogenehomolog 1 isoform a /DB_XREF=gi:6382056 /UG=Hs.146355 v-abl Abelson murine leukemia viral oncogene homolog 1 /FL=gb:M14752.1 gb:NM_005157.2 </td> <td> NM_005157 </td> <td> ABL proto-oncogene 1, non-receptor tyrosine kinase </td> <td> ABL1 </td> <td> 25 </td> <td> NM_005157 /// NM_007313 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006298 // mismatch repair // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0006975 // DNA damage induced protein phosphorylation // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // traceable author statement /// 0010506 // regulation of autophagy // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030100 // regulation of endocytosis // traceable author statement /// 0030155 // regulation of cell adhesion // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0042692 // muscle cell differentiation // traceable author statement /// 0042770 // signal transduction in response to DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051353 // positive regulation of oxidoreductase activity // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from direct assay /// 2000145 // regulation of cell motility // traceable author statement /// 2000249 // regulation of actin cytoskeleton reorganization // traceable author statement /// 2001020 // regulation of response to DNA damage stimulus // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003677 // DNA binding // non-traceable author statement /// 0003785 // actin monomer binding // traceable author statement /// 0004515 // nicotinate-nucleotide adenylyltransferase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from physical interaction /// 0030145 // manganese ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051019 // mitogen-activated protein kinase binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from physical interaction </td> <td> -261.00 </td> <td> 462.60 </td> <td> -5.41 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201724_s_at </td> <td> 201724_s_at </td> <td> NM_020474 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020474.2 /DEF=Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) (GALNT1), mRNA.  /FEA=mRNA /GEN=GALNT1 /PROD=polypeptide N-acetylgalactosaminyltransferase 1 /DB_XREF=gi:13124890 /UG=Hs.80120 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) /FL=gb:U41514.1 gb:NM_020474.2 </td> <td> NM_020474 </td> <td> polypeptide N-acetylgalactosaminyltransferase 1 </td> <td> GALNT1 </td> <td> 2589 </td> <td> NM_020474 /// XM_005258239 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0006493 // protein O-linked glycosylation // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0018242 // protein O-linked glycosylation via serine // inferred from direct assay /// 0018243 // protein O-linked glycosylation via threonine // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 92.62 </td> <td> 416.89 </td> <td> 5.40 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218577_at </td> <td> 218577_at </td> <td> NM_017768 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017768.1 /DEF=Homo sapiens hypothetical protein FLJ20331 (FLJ20331), mRNA. /FEA=mRNA /GEN=FLJ20331 /PROD=hypothetical protein FLJ20331 /DB_XREF=gi:8923306 /UG=Hs.50848 hypothetical protein FLJ20331 /FL=gb:BC003407.1 gb:NM_017768.1 </td> <td> NM_017768 </td> <td> leucine rich repeat containing 40 </td> <td> LRRC40 </td> <td> 55631 </td> <td> NM_017768 /// XM_005271013 /// XM_006710757 </td> <td>  </td> <td> 0016020 // membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 79.07 </td> <td> 162.69 </td> <td> 5.40 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201802_at </td> <td> 201802_at </td> <td> NM_004955 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004955.1 /DEF=Homo sapiens solute carrier family 29 (nucleoside transporters), member 1 (SLC29A1), mRNA.  /FEA=mRNA /GEN=SLC29A1 /PROD=solute carrier family 29 (nucleosidetransporters), member 1 /DB_XREF=gi:4826715 /UG=Hs.25450 solute carrier family 29 (nucleoside transporters), member 1 /FL=gb:BC001382.1 gb:U81375.1 gb:AF079117.1 gb:NM_004955.1 </td> <td> NM_004955 </td> <td> solute carrier family 29 (equilibrative nucleoside transporter), member 1 </td> <td> SLC29A1 </td> <td> 2030 </td> <td> NM_001078174 /// NM_001078175 /// NM_001078176 /// NM_001078177 /// NM_004955 /// XM_005248875 /// XM_005248876 /// XM_005248878 /// XM_005248879 /// XM_005248880 /// XM_005248881 /// XM_005248882 </td> <td> 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0015858 // nucleoside transport // inferred from direct assay /// 0015862 // uridine transport // inferred from electronic annotation /// 0030431 // sleep // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 1901642 // nucleoside transmembrane transport // inferred from electronic annotation /// 1901642 // nucleoside transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay </td> <td> 0005337 // nucleoside transmembrane transporter activity // inferred from electronic annotation </td> <td> 100.52 </td> <td> 311.96 </td> <td> 5.40 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212622_at </td> <td> 212622_at </td> <td> N64760 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N64760 /FEA=EST /DB_XREF=gi:1212589 /DB_XREF=est:yz30c06.s1 /CLONE=IMAGE:284554 /UG=Hs.174905 KIAA0033 protein </td> <td> N64760 </td> <td> transmembrane protein 41B </td> <td> TMEM41B </td> <td> 440026 </td> <td> NM_001165030 /// NM_015012 /// NR_028491 </td> <td> 0007399 // nervous system development // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 58.20 </td> <td> 127.55 </td> <td> 5.40 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212961_x_at </td> <td> 212961_x_at </td> <td> L43578 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:L43578.1 /DEF=Homo sapiens (clone 115392) mRNA. /FEA=mRNA /DB_XREF=gi:899067 /UG=Hs.82171 Homo sapiens (clone 115392) mRNA </td> <td> L43578 </td> <td> chromosome X open reading frame 40B </td> <td> CXorf40B </td> <td> 541578 </td> <td> NM_001013845 /// XM_005274698 /// XM_005274699 /// XM_005274700 /// XM_005274701 /// XM_005274702 /// XM_006724825 /// XM_006724826 /// XM_006724827 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 55.80 </td> <td> 149.03 </td> <td> 5.40 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 215034_s_at </td> <td> 215034_s_at </td> <td> AI189753 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI189753 /FEA=EST /DB_XREF=gi:3740962 /DB_XREF=est:qd33a01.x1 /CLONE=IMAGE:1725480 /UG=Hs.306643 Homo sapiens cDNA FLJ13302 fis, clone OVARC1001357 </td> <td> AI189753 </td> <td> transmembrane 4 L six family member 1 </td> <td> TM4SF1 </td> <td> 4071 </td> <td> NM_014220 </td> <td>  </td> <td> 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 308.18 </td> <td> 833.09 </td> <td> 5.40 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202134_s_at </td> <td> 202134_s_at </td> <td> NM_015472 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015472.1 /DEF=Homo sapiens transcriptional co-activator with PDZ-binding motif (TAZ) (TAZ), mRNA.  /FEA=mRNA /GEN=TAZ /PROD=transcriptional co-activator with PDZ-bindingmotif (TAZ) /DB_XREF=gi:13346497 /UG=Hs.24341 transcriptional co-activator with PDZ-binding motif (TAZ) /FL=gb:NM_015472.1 </td> <td> NM_015472 </td> <td> WW domain containing transcription regulator 1 </td> <td> WWTR1 </td> <td> 25937 </td> <td> NM_001168278 /// NM_001168280 /// NM_015472 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0017145 // stem cell division // inferred from direct assay /// 0032835 // glomerulus development // inferred from electronic annotation /// 0035329 // hippo signaling // inferred from direct assay /// 0035329 // hippo signaling // traceable author statement /// 0035414 // negative regulation of catenin import into nucleus // inferred from mutant phenotype /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0060271 // cilium morphogenesis // inferred from electronic annotation /// 0060390 // regulation of SMAD protein import into nucleus // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation </td> <td> -244.65 </td> <td> 371.73 </td> <td> -5.39 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201599_at </td> <td> 201599_at </td> <td> NM_000274 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000274.1 /DEF=Homo sapiens ornithine aminotransferase (gyrate atrophy) (OAT), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=OAT /PROD=ornithine aminotransferase precursor /DB_XREF=gi:4557808 /UG=Hs.75485 ornithine aminotransferase (gyrate atrophy) /FL=gb:BC000964.1 gb:M12267.1 gb:M23204.1 gb:M14963.1 gb:NM_000274.1 </td> <td> NM_000274 </td> <td> ornithine aminotransferase </td> <td> OAT </td> <td> 4942 </td> <td> NM_000274 /// NM_001171814 /// XM_006717871 </td> <td> 0007601 // visual perception // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0034214 // protein hexamerization // inferred from direct assay /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055129 // L-proline biosynthetic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004587 // ornithine-oxo-acid transaminase activity // not recorded /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation </td> <td> 234.70 </td> <td> 530.98 </td> <td> 5.39 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202368_s_at </td> <td> 202368_s_at </td> <td> AI986461 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI986461 /FEA=EST /DB_XREF=gi:5813738 /DB_XREF=est:wz65f07.x1 /CLONE=IMAGE:2562949 /UG=Hs.153954 TRAM-like protein /FL=gb:D31762.1 gb:NM_012288.1 </td> <td> AI986461 </td> <td> translocation associated membrane protein 2 </td> <td> TRAM2 </td> <td> 9697 </td> <td> NM_012288 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0032964 // collagen biosynthetic process // inferred from mutant phenotype </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 153.43 </td> <td> 253.36 </td> <td> 5.39 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 217993_s_at </td> <td> 217993_s_at </td> <td> NM_013283 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013283.1 /DEF=Homo sapiens methionine adenosyltransferase II, beta (MAT2B), mRNA. /FEA=mRNA /GEN=MAT2B /PROD=methionine adenosyltransferase II, beta /DB_XREF=gi:11034824 /UG=Hs.54642 methionine adenosyltransferase II, beta /FL=gb:NM_013283.1 gb:AF113225.1 gb:AL136664.1 gb:AF182814.1 </td> <td> NM_013283 </td> <td> methionine adenosyltransferase II, beta </td> <td> MAT2B </td> <td> 27430 </td> <td> NM_013283 /// NM_182796 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from direct assay /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0032259 // methylation // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045226 // extracellular polysaccharide biosynthetic process // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0048269 // methionine adenosyltransferase complex // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0003854 // 3-beta-hydroxy-delta5-steroid dehydrogenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008831 // dTDP-4-dehydrorhamnose reductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0048270 // methionine adenosyltransferase regulator activity // inferred from direct assay /// 0050662 // coenzyme binding // inferred from electronic annotation </td> <td> -282.45 </td> <td> 990.98 </td> <td> -5.39 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218696_at </td> <td> 218696_at </td> <td> NM_004836 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004836.1 /DEF=Homo sapiens eukaryotic translation initiation factor 2-alpha kinase 3 (EIF2AK3), mRNA.  /FEA=mRNA /GEN=EIF2AK3 /PROD=eukaryotic translation initiation factor 2-alphakinase 3 /DB_XREF=gi:4758891 /UG=Hs.102506 eukaryotic translation initiation factor 2-alpha kinase 3 /FL=gb:AF110146.1 gb:NM_004836.1 gb:AF193339.1 </td> <td> NM_004836 </td> <td> eukaryotic translation initiation factor 2-alpha kinase 3 </td> <td> EIF2AK3 </td> <td> 9451 </td> <td> NM_004836 /// XM_005264649 </td> <td> 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001503 // ossification // inferred from mutant phenotype /// 0002063 // chondrocyte development // inferred from sequence or structural similarity /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0006983 // ER overload response // inferred from direct assay /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007029 // endoplasmic reticulum organization // inferred from sequence or structural similarity /// 0007595 // lactation // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0017148 // negative regulation of translation // traceable author statement /// 0019217 // regulation of fatty acid metabolic process // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from sequence or structural similarity /// 0030073 // insulin secretion // inferred from sequence or structural similarity /// 0030282 // bone mineralization // inferred from sequence or structural similarity /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from direct assay /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031016 // pancreas development // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from mutant phenotype /// 0031642 // negative regulation of myelination // inferred from sequence or structural similarity /// 0032055 // negative regulation of translation in response to stress // inferred from electronic annotation /// 0032057 // negative regulation of translational initiation in response to stress // traceable author statement /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0032933 // SREBP signaling pathway // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from mutant phenotype /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation </td> <td> 0005623 // cell // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred by curator /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // non-traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from direct assay /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from mutant phenotype /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 72.10 </td> <td> 121.45 </td> <td> 5.39 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209523_at </td> <td> 209523_at </td> <td> AK001618 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001618.1 /DEF=Homo sapiens cDNA FLJ10756 fis, clone NT2RP3004572, highly similar to Homo sapiens cofactor of initiator function mRNA.  /FEA=mRNA /DB_XREF=gi:7022983 /UG=Hs.122752 TATA box binding protein (TBP)-associated factor, RNA polymerase II, B, 150kD /FL=gb:AF026445.1 gb:AF040701.1 gb:AF057694.1 gb:NM_003184.1 </td> <td> AK001618 </td> <td> TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa </td> <td> TAF2 </td> <td> 6873 </td> <td> NM_003184 /// XM_006716621 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from mutant phenotype </td> <td> 53.77 </td> <td> 157.81 </td> <td> 5.39 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 205566_at </td> <td> 205566_at </td> <td> NM_007011 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007011.1 /DEF=Homo sapiens putative transmembrane protein (HS1-2), mRNA. /FEA=mRNA /GEN=HS1-2 /PROD=putative transmembrane protein /DB_XREF=gi:5901977 /UG=Hs.99364 putative transmembrane protein /FL=gb:NM_007011.1 </td> <td> NM_007011 </td> <td> abhydrolase domain containing 2 </td> <td> ABHD2 </td> <td> 11057 </td> <td> NM_007011 /// NM_152924 /// XM_005254832 /// XM_005254833 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -44.67 </td> <td> 96.31 </td> <td> -5.38 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 214011_s_at </td> <td> 214011_s_at </td> <td> BE314601 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE314601 /FEA=EST /DB_XREF=gi:9135934 /DB_XREF=est:601149573F1 /CLONE=IMAGE:3502002 /UG=Hs.279918 hypothetical protein </td> <td> BE314601 </td> <td> NOP16 nucleolar protein </td> <td> NOP16 </td> <td> 51491 </td> <td> NM_001256539 /// NM_001256540 /// NM_001291305 /// NM_001291306 /// NM_001291307 /// NM_001291308 /// NM_016391 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 114.85 </td> <td> 223.88 </td> <td> 5.38 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 205034_at </td> <td> 205034_at </td> <td> NM_004702 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004702.1 /DEF=Homo sapiens cyclin E2 (CCNE2), mRNA. /FEA=mRNA /GEN=CCNE2 /PROD=cyclin E2 /DB_XREF=gi:4757931 /UG=Hs.30464 cyclin E2 /FL=gb:AF091433.1 gb:AF102778.1 gb:AF106690.1 gb:NM_004702.1 </td> <td> NM_004702 </td> <td> cyclin E2 </td> <td> CCNE2 </td> <td> 9134 </td> <td> NM_004702 /// NM_057735 /// NM_057749 </td> <td> 0000075 // cell cycle checkpoint // traceable author statement /// 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006270 // DNA replication initiation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016538 // cyclin-dependent protein serine/threonine kinase regulator activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation </td> <td> 44.32 </td> <td> 44.39 </td> <td> 5.38 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201500_s_at </td> <td> 201500_s_at </td> <td> NM_021959 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021959.1 /DEF=Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 11 (PPP1R11), mRNA.  /FEA=mRNA /GEN=PPP1R11 /PROD=protein phosphatase 1, regulatory (inhibitor)subunit 11 /DB_XREF=gi:11386174 /UG=Hs.82887 protein phosphatase 1, regulatory (inhibitor) subunit 11 /FL=gb:NM_021959.1 </td> <td> NM_021959 </td> <td> protein phosphatase 1, regulatory (inhibitor) subunit 11 </td> <td> PPP1R11 </td> <td> 6992 </td> <td> NM_021959 /// NM_170781 /// XM_005275158 /// XM_006715174 /// XM_006725042 /// XM_006725499 /// XM_006725713 /// XM_006725921 /// XM_006726016 /// XM_006726110 </td> <td> 0043086 // negative regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity </td> <td> 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 70.42 </td> <td> 310.54 </td> <td> 5.38 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209085_x_at </td> <td> 209085_x_at </td> <td> L14922 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L14922.1 /DEF=Homo sapiens DNA-binding protein (PO-GA) mRNA, complete cds. /FEA=mRNA /PROD=DNA-binding protein /DB_XREF=gi:307337 /UG=Hs.166563 replication factor C (activator 1) 1 (145kD) /FL=gb:AF040250.1 gb:L14922.1 </td> <td> L14922 </td> <td> replication factor C (activator 1) 1, 145kDa </td> <td> RFC1 </td> <td> 5981 </td> <td> NM_001204747 /// NM_002913 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006261 // DNA-dependent DNA replication // traceable author statement /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007004 // telomere maintenance via telomerase // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005663 // DNA replication factor C complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // not recorded /// 0003689 // DNA clamp loader activity // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -65.95 </td> <td> 111.42 </td> <td> -5.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 219920_s_at </td> <td> 219920_s_at </td> <td> NM_021971 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021971.1 /DEF=Homo sapiens GDP-mannose pyrophosphorylase B (GMPPB), transcript variant 2, mRNA.  /FEA=mRNA /GEN=GMPPB /PROD=GDP-mannose pyrophosphorylase B, isoform 2 /DB_XREF=gi:11761620 /UG=Hs.28077 GDP-mannose pyrophosphorylase B /FL=gb:NM_021971.1 gb:BC001141.1 gb:AF135421.1 </td> <td> NM_021971 </td> <td> adhesion molecule with Ig-like domain 3 /// GDP-mannose pyrophosphorylase B </td> <td> AMIGO3 /// GMPPB </td> <td> 29925 /// 386724 </td> <td> NM_013334 /// NM_021971 /// NM_198722 </td> <td> 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from sequence or structural similarity /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009298 // GDP-mannose biosynthetic process // inferred from electronic annotation /// 0009298 // GDP-mannose biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004475 // mannose-1-phosphate guanylyltransferase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation </td> <td> 63.05 </td> <td> 81.95 </td> <td> 5.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 221729_at </td> <td> 221729_at </td> <td> AL575735 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL575735 /FEA=EST /DB_XREF=gi:12937190 /DB_XREF=est:AL575735 /CLONE=CS0DI070YK23 (3 prime) /UG=Hs.82985 collagen, type V, alpha 2 /FL=gb:NM_000393.1 </td> <td> AL575735 </td> <td> collagen, type V, alpha 2 </td> <td> COL5A2 </td> <td> 1290 </td> <td> NM_000393 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030199 // collagen fibril organization // inferred from mutant phenotype /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030574 // collagen catabolic process // traceable author statement /// 0043588 // skin development // inferred from mutant phenotype /// 0043588 // skin development // inferred from sequence or structural similarity /// 0048592 // eye morphogenesis // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005588 // collagen type V trimer // inferred from mutant phenotype /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0031012 // extracellular matrix // non-traceable author statement </td> <td> 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -148.57 </td> <td> 618.61 </td> <td> -5.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212811_x_at </td> <td> 212811_x_at </td> <td> AI889380 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI889380 /FEA=EST /DB_XREF=gi:5594544 /DB_XREF=est:wm98e02.x1 /CLONE=IMAGE:2443994 /UG=Hs.286049 phosphoserine aminotransferase </td> <td> AI889380 </td> <td> solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 </td> <td> SLC1A4 </td> <td> 6509 </td> <td> NM_001135581 /// NM_001193493 /// NM_003038 /// XM_006712079 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006821 // chloride transport // inferred from direct assay /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0006868 // glutamine transport // traceable author statement /// 0015808 // L-alanine transport // inferred from direct assay /// 0015811 // L-cystine transport // inferred from direct assay /// 0015824 // proline transport // inferred from direct assay /// 0015825 // L-serine transport // inferred from direct assay /// 0015826 // threonine transport // inferred from direct assay /// 0034589 // hydroxyproline transport // inferred from direct assay /// 0035249 // synaptic transmission, glutamatergic // non-traceable author statement /// 0035524 // proline transmembrane transport // inferred from direct assay /// 0050890 // cognition // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement /// 1902476 // chloride transmembrane transport // inferred from direct assay </td> <td> 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005882 // intermediate filament // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred by curator /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005254 // chloride channel activity // inferred from direct assay /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015180 // L-alanine transmembrane transporter activity // inferred from direct assay /// 0015184 // L-cystine transmembrane transporter activity // inferred from direct assay /// 0015186 // L-glutamine transmembrane transporter activity // traceable author statement /// 0015193 // L-proline transmembrane transporter activity // inferred from direct assay /// 0015194 // L-serine transmembrane transporter activity // inferred from direct assay /// 0015195 // L-threonine transmembrane transporter activity // inferred from direct assay /// 0015293 // symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation /// 0034590 // L-hydroxyproline transmembrane transporter activity // inferred from direct assay </td> <td> -66.57 </td> <td> 104.14 </td> <td> -5.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202419_at </td> <td> 202419_at </td> <td> NM_002035 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002035.1 /DEF=Homo sapiens follicular lymphoma variant translocation 1 (FVT1), mRNA.  /FEA=mRNA /GEN=FVT1 /PROD=follicular lymphoma variant translocation 1 /DB_XREF=gi:4503816 /UG=Hs.74050 follicular lymphoma variant translocation 1 /FL=gb:NM_002035.1 </td> <td> NM_002035 </td> <td> 3-ketodihydrosphingosine reductase </td> <td> KDSR </td> <td> 2531 </td> <td> NM_002035 /// XM_005266677 /// XM_006722433 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006666 // 3-keto-sphinganine metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005615 // extracellular space // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0047560 // 3-dehydrosphinganine reductase activity // inferred from direct assay </td> <td> -64.75 </td> <td> 178.10 </td> <td> -5.37 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200654_at </td> <td> 200654_at </td> <td> J02783 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:J02783.1 /DEF=Human thyroid hormone binding protein (p55) mRNA, complete cds. /FEA=mRNA /GEN=P4HB /DB_XREF=gi:339646 /UG=Hs.75655 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), beta polypeptide (protein disulfide isomerase; thyroid hormone binding protein p55) /FL=gb:J02783.1 gb:NM_000918.1 </td> <td> J02783 </td> <td> prolyl 4-hydroxylase, beta polypeptide </td> <td> P4HB </td> <td> 5034 </td> <td> NM_000918 </td> <td> 0006457 // protein folding // not recorded /// 0008152 // metabolic process // inferred from electronic annotation /// 0018401 // peptidyl-proline hydroxylation to 4-hydroxy-L-proline // inferred from direct assay /// 0030198 // extracellular matrix organization // traceable author statement /// 0034976 // response to endoplasmic reticulum stress // inferred from mutant phenotype /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from mutant phenotype /// 1902175 // regulation of intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016222 // procollagen-proline 4-dioxygenase complex // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003756 // protein disulfide isomerase activity // not recorded /// 0004656 // procollagen-proline 4-dioxygenase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -717.05 </td> <td> 2574.75 </td> <td> -5.36 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202868_s_at </td> <td> 202868_s_at </td> <td> NM_006627 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006627.1 /DEF=Homo sapiens POP4 (processing of precursor , S. cerevisiae) homolog (POP4), mRNA.  /FEA=mRNA /GEN=POP4 /PROD=POP4 (processing of precursor , S. cerevisiae)homolog /DB_XREF=gi:5729985 /UG=Hs.82238 POP4 (processing of precursor , S. cerevisiae) homolog /FL=gb:BC004438.1 gb:AF001176.2 gb:NM_006627.1 </td> <td> NM_006627 </td> <td> processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) </td> <td> POP4 </td> <td> 10775 </td> <td> NM_006627 /// NR_027368 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation /// 0006379 // mRNA cleavage // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0090501 // RNA phosphodiester bond hydrolysis // traceable author statement /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // traceable author statement </td> <td> 0000172 // ribonuclease MRP complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005655 // nucleolar ribonuclease P complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0030677 // ribonuclease P complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0004526 // ribonuclease P activity // inferred from electronic annotation /// 0004540 // ribonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 52.10 </td> <td> 179.30 </td> <td> 5.36 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 219568_x_at </td> <td> 219568_x_at </td> <td> NM_018419 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018419.1 /DEF=Homo sapiens SRY (sex determining region Y)-box 18 (SOX18), mRNA. /FEA=mRNA /GEN=SOX18 /PROD=SRY (sex determining region Y)-box 18 /DB_XREF=gi:8924247 /UG=Hs.8619 SRY (sex determining region Y)-box 18 /FL=gb:AF270652.1 gb:AB033888.1 gb:NM_018419.1 </td> <td> NM_018419 </td> <td> SRY (sex determining region Y)-box 18 </td> <td> SOX18 </td> <td> 54345 </td> <td> NM_018419 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001525 // angiogenesis // inferred from expression pattern /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from sequence or structural similarity /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0001946 // lymphangiogenesis // inferred from mutant phenotype /// 0001947 // heart looping // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0022405 // hair cycle process // inferred from mutant phenotype /// 0035050 // embryonic heart tube development // inferred from sequence or structural similarity /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from direct assay /// 0043534 // blood vessel endothelial cell migration // inferred from expression pattern /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048469 // cell maturation // inferred from electronic annotation /// 0048866 // stem cell fate specification // inferred from electronic annotation /// 0060214 // endocardium formation // inferred from sequence or structural similarity /// 0060836 // lymphatic endothelial cell differentiation // inferred from sequence or structural similarity /// 0060956 // endocardial cell differentiation // inferred from sequence or structural similarity /// 0061028 // establishment of endothelial barrier // inferred from mutant phenotype /// 0072091 // regulation of stem cell proliferation // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay </td> <td> 84.53 </td> <td> 92.94 </td> <td> 5.36 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201377_at </td> <td> 201377_at </td> <td> NM_014847 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014847.1 /DEF=Homo sapiens KIAA0144 gene product (KIAA0144), mRNA. /FEA=mRNA /GEN=KIAA0144 /PROD=KIAA0144 gene product /DB_XREF=gi:7661941 /UG=Hs.8127 KIAA0144 gene product /FL=gb:D63478.1 gb:NM_014847.1 </td> <td> NM_014847 </td> <td> ubiquitin associated protein 2-like </td> <td> UBAP2L </td> <td> 9898 </td> <td> NM_001127320 /// NM_001287815 /// NM_001287816 /// NM_014847 /// XM_005245658 /// XM_005245667 /// XM_005245668 /// XM_005245669 /// XM_005245670 /// XM_005245672 /// XM_005245673 /// XM_005245674 /// XM_006711679 /// XM_006711680 /// XM_006711681 /// XM_006711682 /// XM_006711683 /// XM_006711684 /// XM_006711685 /// XM_006711686 /// XM_006711687 /// XM_006711688 /// XM_006711689 </td> <td> 0007339 // binding of sperm to zona pellucida // inferred from mutant phenotype </td> <td> 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 101.50 </td> <td> 132.78 </td> <td> 5.36 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203087_s_at </td> <td> 203087_s_at </td> <td> NM_004520 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004520.1 /DEF=Homo sapiens kinesin heavy chain member 2 (KIF2), mRNA. /FEA=mRNA /GEN=KIF2 /PROD=kinesin heavy chain member 2 /DB_XREF=gi:4758643 /UG=Hs.113319 kinesin heavy chain member 2 /FL=gb:NM_004520.1 </td> <td> NM_004520 </td> <td> kinesin heavy chain member 2A </td> <td> KIF2A </td> <td> 3796 </td> <td> NM_001098511 /// NM_001243952 /// NM_001243953 /// NM_004520 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007018 // microtubule-based movement // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007052 // mitotic spindle organization // inferred from direct assay /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // traceable author statement /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation </td> <td> -97.17 </td> <td> 258.34 </td> <td> -5.36 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201609_x_at </td> <td> 201609_x_at </td> <td> AL578502 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL578502 /FEA=EST /DB_XREF=gi:12942638 /DB_XREF=est:AL578502 /CLONE=CS0DK011YK08 (3 prime) /UG=Hs.183212 isoprenylcysteine carboxyl methyltransferase /FL=gb:AF064084.1 gb:NM_012405.1 gb:AF173157.1 </td> <td> AL578502 </td> <td> isoprenylcysteine carboxyl methyltransferase </td> <td> ICMT </td> <td> 23463 </td> <td> NM_012405 /// NM_170705 /// XM_005263437 /// XM_006710518 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006479 // protein methylation // inferred from electronic annotation /// 0006481 // C-terminal protein methylation // inferred from electronic annotation /// 0006612 // protein targeting to membrane // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0046578 // regulation of Ras protein signal transduction // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003880 // protein C-terminal carboxyl O-methyltransferase activity // traceable author statement /// 0004671 // protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity // inferred from electronic annotation /// 0008140 // cAMP response element binding protein binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 75.58 </td> <td> 156.44 </td> <td> 5.36 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200864_s_at </td> <td> 200864_s_at </td> <td> NM_004663 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004663.1 /DEF=Homo sapiens RAB11A, member RAS oncogene family (RAB11A), mRNA. /FEA=mRNA /GEN=RAB11A /PROD=RAB11A, member RAS oncogene family /DB_XREF=gi:4758983 /UG=Hs.75618 RAB11A, member RAS oncogene family /FL=gb:AF000231.1 gb:NM_004663.1 </td> <td> NM_004663 </td> <td> RAB11A, member RAS oncogene family </td> <td> RAB11A </td> <td> 8766 </td> <td> NM_001206836 /// NM_004663 </td> <td> 0000910 // cytokinesis // inferred from mutant phenotype /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from direct assay /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0032402 // melanosome transport // inferred from sequence or structural similarity /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048227 // plasma membrane to endosome transport // non-traceable author statement /// 0051223 // regulation of protein transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0072659 // protein localization to plasma membrane // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from sequence or structural similarity /// 0055038 // recycling endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019905 // syntaxin binding // non-traceable author statement </td> <td> 68.40 </td> <td> 84.15 </td> <td> 5.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208644_at </td> <td> 208644_at </td> <td> M32721 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M32721.1 /DEF=Human poly(ADP-ribose) polymerase mRNA, complete cds. /FEA=mRNA /GEN=PPOL /DB_XREF=gi:190266 /UG=Hs.177766 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase) /FL=gb:NM_001618.2 gb:M18112.1 gb:M32721.1 gb:J03473.1 </td> <td> M32721 </td> <td> poly (ADP-ribose) polymerase 1 </td> <td> PARP1 </td> <td> 142 </td> <td> NM_001618 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000723 // telomere maintenance // inferred from electronic annotation /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006471 // protein ADP-ribosylation // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016540 // protein autoprocessing // inferred from electronic annotation /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030225 // macrophage differentiation // traceable author statement /// 0032869 // cellular response to insulin stimulus // inferred from direct assay /// 0040009 // regulation of growth rate // inferred from electronic annotation /// 0042769 // DNA damage response, detection of DNA damage // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from electronic annotation /// 0070212 // protein poly-ADP-ribosylation // inferred from direct assay /// 2000679 // positive regulation of transcription regulatory region DNA binding // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from direct assay /// 0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051287 // NAD binding // inferred from electronic annotation /// 0070412 // R-SMAD binding // inferred from electronic annotation </td> <td> 87.98 </td> <td> 196.64 </td> <td> 5.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 221748_s_at </td> <td> 221748_s_at </td> <td> AL046979 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL046979 /FEA=EST /DB_XREF=gi:5435035 /DB_XREF=est:DKFZp586K0617_s1 /CLONE=DKFZp586K0617 /UG=Hs.9973 tensin </td> <td> AL046979 </td> <td> tensin 1 </td> <td> TNS1 </td> <td> 7145 </td> <td> NM_022648 /// XM_005246825 /// XM_005246826 /// XM_006712721 /// XM_006712722 </td> <td> 0007044 // cell-substrate junction assembly // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030055 // cell-substrate junction // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 59.87 </td> <td> 158.71 </td> <td> 5.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 221937_at </td> <td> 221937_at </td> <td> AI472320 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI472320 /FEA=EST /DB_XREF=gi:4334410 /DB_XREF=est:tj87c02.x1 /CLONE=IMAGE:2148482 /UG=Hs.48504 ESTs, Moderately similar to ALU5_HUMAN ALU SUBFAMILY SC SEQUENCE CONTAMINATION WARNING ENTRY H.sapiens </td> <td> AI472320 </td> <td> synergin, gamma </td> <td> SYNRG </td> <td> 11276 </td> <td> NM_001163544 /// NM_001163545 /// NM_001163546 /// NM_001163547 /// NM_007247 /// NM_080550 /// NM_198882 /// XM_005256980 /// XM_005256981 /// XM_005256982 /// XM_005256983 /// XM_005256985 /// XM_005256986 /// XM_005256988 /// XM_006721652 /// XM_006721653 /// XM_006721654 /// XM_006721655 /// XM_006725301 /// XM_006725302 /// XM_006725303 /// XM_006725304 /// XM_006725305 /// XM_006725306 /// XM_006725307 /// XM_006725308 /// XM_006725309 /// XM_006725310 /// XM_006725311 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030121 // AP-1 adaptor complex // traceable author statement </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation </td> <td> 78.32 </td> <td> 77.59 </td> <td> 5.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212072_s_at </td> <td> 212072_s_at </td> <td> AL049761 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049761 /DEF=Human DNA sequence from clone RP5-863C7 on chromosome 20p12.3-13. Contains the CSNK2A1 gene for casein kinase 2 alpha 1 polypeptide (EC 2.7.1.37), ESTs, STSs and GSSs /FEA=mRNA_2 /DB_XREF=gi:5738437 /UG=Hs.155140 casein kinase 2, alpha 1 polypeptide </td> <td> AL049761 </td> <td> casein kinase 2, alpha 1 polypeptide </td> <td> CSNK2A1 </td> <td> 1457 </td> <td> NM_001895 /// NM_177559 /// NM_177560 /// XM_006723548 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0001558 // regulation of cell growth // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from mutant phenotype /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0042127 // regulation of cell proliferation // non-traceable author statement /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // traceable author statement /// 0071174 // mitotic spindle checkpoint // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005956 // protein kinase CK2 complex // traceable author statement /// 0016580 // Sin3 complex // inferred from direct assay /// 0016581 // NuRD complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019888 // protein phosphatase regulator activity // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051879 // Hsp90 protein binding // traceable author statement </td> <td> -67.45 </td> <td> 200.40 </td> <td> -5.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212609_s_at </td> <td> 212609_s_at </td> <td> U79271 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U79271.1 /DEF=Human clones 23920 and 23921 mRNA sequence. /FEA=mRNA /DB_XREF=gi:1710237 /UG=Hs.300642 serologically defined colon cancer antigen 8 </td> <td> U79271 </td> <td> v-akt murine thymoma viral oncogene homolog 3 </td> <td> AKT3 </td> <td> 10000 </td> <td> NM_001206729 /// NM_005465 /// NM_181690 /// XM_005272994 /// XM_005272995 /// XM_005272997 /// XM_006711725 /// XM_006711726 /// XM_006724959 /// XM_006724960 /// XM_006724961 /// XM_006724962 /// XM_006724963 </td> <td> 0000002 // mitochondrial genome maintenance // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 49.77 </td> <td> 86.56 </td> <td> 5.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208863_s_at </td> <td> 208863_s_at </td> <td> M72709 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M72709.1 /DEF=Human alternative splicing factor mRNA, complete cds. /FEA=mRNA /DB_XREF=gi:179073 /UG=Hs.73737 splicing factor, arginineserine-rich 1 (splicing factor 2, alternate splicing factor) /FL=gb:M72709.1 </td> <td> M72709 </td> <td> serine/arginine-rich splicing factor 1 </td> <td> SRSF1 </td> <td> 6426 </td> <td> NM_001078166 /// NM_006924 /// NR_034041 /// XM_006722012 /// XR_429911 /// XR_429912 /// XR_429999 /// XR_430000 /// XR_430001 /// XR_430002 /// XR_433418 /// XR_433419 /// XR_433420 /// XR_433421 /// XR_433422 </td> <td> 0000395 // mRNA 5'-splice site recognition // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0060048 // cardiac muscle contraction // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from physical interaction /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050733 // RS domain binding // inferred from electronic annotation </td> <td> 70.45 </td> <td> 175.80 </td> <td> 5.35 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202706_s_at </td> <td> 202706_s_at </td> <td> D86227 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D86227.1 /DEF=Homo sapiens clone TA-UMPSpoly mRNA for UMP synthase, complete cds.  /FEA=mRNA /GEN=UMPS /PROD=UMP synthase /DB_XREF=gi:2081619 /UG=Hs.2057 uridine monophosphate synthetase (orotate phosphoribosyl transferase and orotidine-5-decarboxylase) /FL=gb:BC000364.1 gb:D86227.1 gb:D86228.1 gb:D86230.1 gb:J03626.1 gb:NM_000373.1 </td> <td> D86227 </td> <td> uridine monophosphate synthetase </td> <td> UMPS </td> <td> 7372 </td> <td> NM_000373 /// NR_033434 /// NR_033437 </td> <td> 0006206 // pyrimidine nucleobase metabolic process // traceable author statement /// 0006207 // 'de novo' pyrimidine nucleobase biosynthetic process // inferred from electronic annotation /// 0006221 // pyrimidine nucleotide biosynthetic process // inferred from electronic annotation /// 0006222 // UMP biosynthetic process // inferred from direct assay /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0044205 // 'de novo' UMP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004588 // orotate phosphoribosyltransferase activity // inferred from direct assay /// 0004588 // orotate phosphoribosyltransferase activity // traceable author statement /// 0004590 // orotidine-5'-phosphate decarboxylase activity // inferred from direct assay /// 0004590 // orotidine-5'-phosphate decarboxylase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation </td> <td> 79.45 </td> <td> 104.65 </td> <td> 5.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 217786_at </td> <td> 217786_at </td> <td> NM_006109 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006109.1 /DEF=Homo sapiens skb1 (S. pombe) homolog (SKB1), mRNA. /FEA=mRNA /GEN=SKB1 /PROD=skb1 (S. pombe) homolog /DB_XREF=gi:5174682 /UG=Hs.12912 skb1 (S. pombe) homolog /FL=gb:AF015913.1 gb:NM_006109.1 gb:AF167572.1 </td> <td> NM_006109 </td> <td> protein arginine methyltransferase 5 </td> <td> PRMT5 </td> <td> 10419 </td> <td> NM_001039619 /// NM_001282953 /// NM_001282954 /// NM_001282955 /// NM_001282956 /// NM_006109 /// XR_429287 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000387 // spliceosomal snRNP assembly // inferred from mutant phenotype /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // not recorded /// 0006479 // protein methylation // inferred from electronic annotation /// 0007088 // regulation of mitosis // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0018216 // peptidyl-arginine methylation // inferred from mutant phenotype /// 0019918 // peptidyl-arginine methylation, to symmetrical-dimethyl arginine // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0034660 // ncRNA metabolic process // traceable author statement /// 0035246 // peptidyl-arginine N-methylation // inferred from direct assay /// 0042118 // endothelial cell activation // inferred from mutant phenotype /// 0043985 // histone H4-R3 methylation // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0034709 // methylosome // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0001046 // core promoter sequence-specific DNA binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from direct assay /// 0008469 // histone-arginine N-methyltransferase activity // not recorded /// 0016740 // transferase activity // inferred from electronic annotation /// 0035243 // protein-arginine omega-N symmetric methyltransferase activity // inferred from mutant phenotype /// 0043021 // ribonucleoprotein complex binding // inferred from physical interaction </td> <td> 91.27 </td> <td> 164.96 </td> <td> 5.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 220748_s_at </td> <td> 220748_s_at </td> <td> NM_016202 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016202.1 /DEF=Homo sapiens LDL induced EC protein (LOC51157), mRNA. /FEA=mRNA /GEN=LOC51157 /PROD=LDL induced EC protein /DB_XREF=gi:7705880 /UG=Hs.94392 LDL induced EC protein /FL=gb:AF184939.1 gb:NM_016202.1 </td> <td> NM_016202 </td> <td> zinc finger protein 580 </td> <td> ZNF580 </td> <td> 51157 </td> <td> NM_001163423 /// NM_016202 /// NM_207115 /// XM_005258967 /// XM_005258968 /// XM_006723236 </td> <td> 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0002690 // positive regulation of leukocyte chemotaxis // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 86.85 </td> <td> 70.90 </td> <td> 5.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 215691_x_at </td> <td> 215691_x_at </td> <td> AV702994 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV702994 /FEA=EST /DB_XREF=gi:10719324 /DB_XREF=est:AV702994 /CLONE=ADBAPB06 /UG=Hs.46967 HSPCO34 protein </td> <td> AV702994 </td> <td> heat shock protein family B (small), member 11 </td> <td> HSPB11 </td> <td> 51668 </td> <td> NM_016126 /// XM_005270942 /// XM_005270943 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from sequence or structural similarity </td> <td> 0005929 // cilium // inferred from electronic annotation /// 0030992 // intraciliary transport particle B // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 64.88 </td> <td> 138.96 </td> <td> 5.33 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 204088_at </td> <td> 204088_at </td> <td> NM_002560 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002560.1 /DEF=Homo sapiens purinergic receptor P2X, ligand-gated ion channel, 4 (P2RX4), mRNA.  /FEA=mRNA /GEN=P2RX4 /PROD=purinergic receptor P2X, ligand-gated ionchannel, 4 /DB_XREF=gi:4505548 /UG=Hs.321709 purinergic receptor P2X, ligand-gated ion channel, 4 /FL=gb:U83993.1 gb:NM_002560.1 </td> <td> NM_002560 </td> <td> purinergic receptor P2X, ligand-gated ion channel, 4 </td> <td> P2RX4 </td> <td> 5025 </td> <td> NM_001256796 /// NM_001261397 /// NM_001261398 /// NM_002560 /// NM_175567 /// NM_175568 /// NR_046372 /// NR_046373 /// XR_429105 </td> <td> 0001894 // tissue homeostasis // non-traceable author statement /// 0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0006809 // nitric oxide biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from direct assay /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from direct assay /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0008217 // regulation of blood pressure // inferred from mutant phenotype /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from direct assay /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from mutant phenotype /// 0010614 // negative regulation of cardiac muscle hypertrophy // inferred from mutant phenotype /// 0019228 // neuronal action potential // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from sequence or structural similarity /// 0032308 // positive regulation of prostaglandin secretion // non-traceable author statement /// 0033198 // response to ATP // inferred from direct assay /// 0034220 // ion transmembrane transport // inferred from direct assay /// 0034405 // response to fluid shear stress // inferred from direct assay /// 0035590 // purinergic nucleotide receptor signaling pathway // inferred from mutant phenotype /// 0042118 // endothelial cell activation // traceable author statement /// 0042311 // vasodilation // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // non-traceable author statement /// 0050850 // positive regulation of calcium-mediated signaling // inferred from direct assay /// 0050850 // positive regulation of calcium-mediated signaling // inferred from mutant phenotype /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051899 // membrane depolarization // inferred from direct assay /// 0051928 // positive regulation of calcium ion transport // non-traceable author statement /// 0055117 // regulation of cardiac muscle contraction // inferred from mutant phenotype /// 0055119 // relaxation of cardiac muscle // inferred from mutant phenotype /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0071318 // cellular response to ATP // inferred from direct assay /// 0097190 // apoptotic signaling pathway // inferred from direct assay </td> <td> 0005639 // integral component of nuclear inner membrane // not recorded /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral component of plasma membrane // inferred by curator /// 0005887 // integral component of plasma membrane // inferred from mutant phenotype /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043195 // terminal bouton // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001614 // purinergic nucleotide receptor activity // inferred from direct assay /// 0001614 // purinergic nucleotide receptor activity // inferred from mutant phenotype /// 0004931 // extracellular ATP-gated cation channel activity // inferred from direct assay /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred by curator /// 0008144 // drug binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // non-traceable author statement /// 0045296 // cadherin binding // inferred from physical interaction </td> <td> -96.13 </td> <td> 230.21 </td> <td> -5.32 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209037_s_at </td> <td> 209037_s_at </td> <td> AW182860 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW182860 /FEA=EST /DB_XREF=gi:6451320 /DB_XREF=est:xj64g08.x1 /CLONE=IMAGE:2662046 /UG=Hs.155119 EH domain containing 1 /FL=gb:AF001434.1 </td> <td> AW182860 </td> <td> EH-domain containing 1 </td> <td> EHD1 </td> <td> 10938 </td> <td> NM_001282444 /// NM_001282445 /// NM_006795 /// XM_006718424 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0010886 // positive regulation of cholesterol storage // inferred from sequence or structural similarity /// 0016197 // endosomal transport // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0032456 // endocytic recycling // inferred from genetic interaction /// 0032456 // endocytic recycling // inferred from mutant phenotype /// 0034383 // low-density lipoprotein particle clearance // inferred from sequence or structural similarity /// 0042632 // cholesterol homeostasis // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from physical interaction /// 1901741 // positive regulation of myoblast fusion // inferred from sequence or structural similarity /// 1990090 // cellular response to nerve growth factor stimulus // inferred from sequence or structural similarity /// 2001137 // positive regulation of endocytic recycling // inferred from sequence or structural similarity </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0010008 // endosome membrane // inferred from sequence or structural similarity /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031095 // platelet dense tubular network membrane // inferred from sequence or structural similarity /// 0031901 // early endosome membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -46.12 </td> <td> 84.46 </td> <td> -5.32 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 206283_s_at </td> <td> 206283_s_at </td> <td> NM_003189 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003189.1 /DEF=Homo sapiens T-cell acute lymphocytic leukemia 1 (TAL1), mRNA. /FEA=mRNA /GEN=TAL1 /PROD=T-cell acute lymphocytic leukemia 1 /DB_XREF=gi:4507362 /UG=Hs.73828 T-cell acute lymphocytic leukemia 1 /FL=gb:M29038.1 gb:NM_003189.1 gb:M61108.1 </td> <td> NM_003189 </td> <td> T-cell acute lymphocytic leukemia 1 </td> <td> TAL1 </td> <td> 6886 </td> <td> NM_001287347 /// NM_001290403 /// NM_001290404 /// NM_001290405 /// NM_001290406 /// NM_003189 /// XM_005271158 /// XM_005271159 /// XM_005271160 /// XM_006710862 /// XM_006710863 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from sequence or structural similarity /// 0030099 // myeloid cell differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from expression pattern /// 0030218 // erythrocyte differentiation // inferred from mutant phenotype /// 0030219 // megakaryocyte differentiation // inferred from expression pattern /// 0030220 // platelet formation // inferred from electronic annotation /// 0030221 // basophil differentiation // inferred from expression pattern /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0035162 // embryonic hemopoiesis // inferred from sequence or structural similarity /// 0035855 // megakaryocyte development // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043249 // erythrocyte maturation // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from sequence or structural similarity /// 0045637 // regulation of myeloid cell differentiation // inferred from electronic annotation /// 0045648 // positive regulation of erythrocyte differentiation // inferred from direct assay /// 0045648 // positive regulation of erythrocyte differentiation // inferred from sequence or structural similarity /// 0045799 // positive regulation of chromatin assembly or disassembly // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048699 // generation of neurons // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from mutant phenotype /// 0060018 // astrocyte fate commitment // inferred from electronic annotation /// 0060216 // definitive hemopoiesis // inferred from electronic annotation /// 0060217 // hemangioblast cell differentiation // inferred from electronic annotation /// 0060218 // hematopoietic stem cell differentiation // inferred from electronic annotation /// 0060375 // regulation of mast cell differentiation // inferred from electronic annotation /// 2000036 // regulation of stem cell maintenance // inferred from electronic annotation </td> <td> 0000118 // histone deacetylase complex // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from direct assay /// 0033193 // Lsd1/2 complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from direct assay </td> <td> 71.77 </td> <td> 116.16 </td> <td> 5.31 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 204549_at </td> <td> 204549_at </td> <td> NM_014002 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014002.1 /DEF=Homo sapiens IKK-related kinase epsilon; inducible IkappaB kinase (IKKE), mRNA.  /FEA=mRNA /GEN=IKKE /PROD=IKK-related kinase epsilon /DB_XREF=gi:7661945 /UG=Hs.321045 IKK-related kinase epsilon; inducible IkappaB kinase /FL=gb:D63485.1 gb:AB016590.1 gb:AF241789.1 gb:NM_014002.1 </td> <td> NM_014002 </td> <td> inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon </td> <td> IKBKE </td> <td> 9641 </td> <td> NM_001193321 /// NM_001193322 /// NM_014002 /// XM_005273356 /// XM_006711641 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006955 // immune response // non-traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007252 // I-kappaB phosphorylation // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038061 // NIK/NF-kappaB signaling // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0016605 // PML body // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004704 // NF-kappaB-inducing kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008384 // IkappaB kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -59.75 </td> <td> 109.45 </td> <td> -5.31 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 207339_s_at </td> <td> 207339_s_at </td> <td> NM_002341 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002341.1 /DEF=Homo sapiens lymphotoxin beta (TNF superfamily, member 3) (LTB), transcript variant 1, mRNA.  /FEA=mRNA /GEN=LTB /PROD=lymphotoxin-beta isoform a /DB_XREF=gi:4505034 /UG=Hs.890 lymphotoxin beta (TNF superfamily, member 3) /FL=gb:L11015.1 gb:NM_002341.1 </td> <td> NM_002341 </td> <td> lymphotoxin beta (TNF superfamily, member 3) </td> <td> LTB </td> <td> 4050 </td> <td> NM_002341 /// NM_009588 </td> <td> 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0010467 // gene expression // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0045084 // positive regulation of interleukin-12 biosynthetic process // inferred from sequence or structural similarity /// 0048535 // lymph node development // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -59.85 </td> <td> 43.75 </td> <td> -5.31 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201980_s_at </td> <td> 201980_s_at </td> <td> NM_012425 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012425.2 /DEF=Homo sapiens Ras suppressor protein 1 (RSU1), mRNA. /FEA=mRNA /GEN=RSU1 /PROD=ras suppressor protein 1 /DB_XREF=gi:10800408 /UG=Hs.75551 Homo sapiens Ras suppressor protein 1 (RSU1), mRNA /FL=gb:NM_012425.2 </td> <td> NM_012425 </td> <td> Ras suppressor protein 1 </td> <td> RSU1 </td> <td> 6251 </td> <td> NM_012425 /// NM_152724 /// XM_005252552 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 66.02 </td> <td> 214.64 </td> <td> 5.31 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 207435_s_at </td> <td> 207435_s_at </td> <td> NM_016333 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016333.1 /DEF=Homo sapiens RNA binding protein; AT-rich element binding factor (SRM300), mRNA.  /FEA=mRNA /GEN=SRM300 /PROD=splicing coactivator subunit SRm300 /DB_XREF=gi:7706718 /UG=Hs.197114 RNA binding protein; AT-rich element binding factor /FL=gb:AF201422.1 gb:NM_016333.1 </td> <td> NM_016333 </td> <td> serine/arginine repetitive matrix 2 </td> <td> SRRM2 </td> <td> 23524 </td> <td> NM_016333 /// XM_005255225 /// XM_005255226 /// XM_005255227 /// XM_006720872 /// XM_006720873 /// XM_006720874 /// XR_243270 /// XR_243271 /// XR_429640 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0070742 // C2H2 zinc finger domain binding // inferred from direct assay </td> <td> 118.65 </td> <td> 197.70 </td> <td> 5.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 220305_at </td> <td> 220305_at </td> <td> NM_024030 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024030.1 /DEF=Homo sapiens hypothetical protein MGC3260 (MGC3260), mRNA. /FEA=mRNA /GEN=MGC3260 /PROD=hypothetical protein MGC3260 /DB_XREF=gi:13128977 /UG=Hs.15514 hypothetical protein MGC3260 /FL=gb:BC000073.1 gb:NM_024030.1 </td> <td> NM_024030 </td> <td> mitochondrial antiviral signaling protein </td> <td> MAVS </td> <td> 57506 </td> <td> NM_001206491 /// NM_020746 /// NR_037921 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0002218 // activation of innate immune response // inferred from mutant phenotype /// 0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0002230 // positive regulation of defense response to virus by host // inferred from mutant phenotype /// 0002376 // immune system process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // inferred from electronic annotation /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032727 // positive regulation of interferon-alpha production // inferred from mutant phenotype /// 0032728 // positive regulation of interferon-beta production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from mutant phenotype /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from direct assay /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from direct assay /// 0039529 // RIG-I signaling pathway // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from mutant phenotype /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051607 // defense response to virus // inferred from direct assay /// 0060340 // positive regulation of type I interferon-mediated signaling pathway // inferred from direct assay /// 0071360 // cellular response to exogenous dsRNA // inferred from mutant phenotype /// 0071651 // positive regulation of chemokine (C-C motif) ligand 5 production // inferred from direct assay /// 0071660 // positive regulation of IP-10 production // inferred from direct assay /// 1900063 // regulation of peroxisome organization // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0050700 // CARD domain binding // inferred from physical interaction </td> <td> 60.35 </td> <td> 49.67 </td> <td> 5.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 211090_s_at </td> <td> 211090_s_at </td> <td> Z25435 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:Z25435.1 /DEF=H.sapiens protein-serinethreonine kinase gene, complete CDS. /FEA=mRNA /PROD=protein-serinethreonine kinase /DB_XREF=gi:405748 /FL=gb:Z25435.1 </td> <td> Z25435 </td> <td> pre-mRNA processing factor 4B </td> <td> PRPF4B </td> <td> 8899 </td> <td> NM_003913 /// NM_176800 /// XM_006715238 /// XR_241936 /// XR_241940 /// XR_241944 /// XR_241945 /// XR_241947 /// XR_241948 /// XR_241949 /// XR_427838 /// XR_427839 /// XR_427840 /// XR_427841 /// XR_427842 /// XR_427843 /// XR_427844 /// XR_427845 /// XR_427846 /// XR_427847 /// XR_427848 /// XR_427849 /// XR_427850 /// XR_427851 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 101.33 </td> <td> 110.86 </td> <td> 5.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 217844_at </td> <td> 217844_at </td> <td> NM_021198 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021198.1 /DEF=Homo sapiens nuclear LIM interactor-interacting factor (NLI-IF), mRNA.  /FEA=mRNA /GEN=NLI-IF /PROD=nuclear LIM interactor-interacting factor /DB_XREF=gi:10864008 /UG=Hs.283724 nuclear LIM interactor-interacting factor /FL=gb:AF229162.1 gb:NM_021198.1 </td> <td> NM_021198 </td> <td> CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 </td> <td> CTDSP1 </td> <td> 58190 </td> <td> NM_001206878 /// NM_001206879 /// NM_021198 /// NM_182642 </td> <td> 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008420 // CTD phosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -89.42 </td> <td> 183.94 </td> <td> -5.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209311_at </td> <td> 209311_at </td> <td> D87461 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D87461.1 /DEF=Human mRNA for KIAA0271 gene, complete cds. /FEA=mRNA /GEN=KIAA0271 /DB_XREF=gi:1944417 /UG=Hs.75244 BCL2-like 2 /FL=gb:U59747.1 gb:D87461.1 gb:NM_004050.1 </td> <td> D87461 </td> <td> BCL2-like 2 </td> <td> BCL2L2 </td> <td> 599 </td> <td> NM_001199839 /// NM_004050 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // not recorded /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0060011 // Sertoli cell proliferation // inferred from electronic annotation /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // not recorded /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // not recorded </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // not recorded /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // not recorded /// 0046982 // protein heterodimerization activity // not recorded /// 0051400 // BH domain binding // inferred from electronic annotation </td> <td> 53.35 </td> <td> 60.90 </td> <td> 5.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 204897_at </td> <td> 204897_at </td> <td> AA897516 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA897516 /FEA=EST /DB_XREF=gi:3034136 /DB_XREF=est:aj62c04.s1 /CLONE=IMAGE:1394886 /UG=Hs.199248 prostaglandin E receptor 4 (subtype EP4) /FL=gb:D28472.1 gb:L25124.1 gb:NM_000958.1 gb:L28175.1 </td> <td> AA897516 </td> <td> prostaglandin E receptor 4 (subtype EP4) </td> <td> PTGER4 </td> <td> 5734 </td> <td> NM_000958 /// XM_005248326 /// XM_005248327 </td> <td> 0006955 // immune response // inferred from expression pattern /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007254 // JNK cascade // inferred from sequence or structural similarity /// 0009612 // response to mechanical stimulus // inferred from expression pattern /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033624 // negative regulation of integrin activation // inferred from direct assay /// 0042093 // T-helper cell differentiation // inferred from sequence or structural similarity /// 0050710 // negative regulation of cytokine secretion // inferred from sequence or structural similarity /// 0050715 // positive regulation of cytokine secretion // inferred from sequence or structural similarity /// 0050728 // negative regulation of inflammatory response // inferred from direct assay /// 0050729 // positive regulation of inflammatory response // inferred from sequence or structural similarity /// 0051492 // regulation of stress fiber assembly // inferred from sequence or structural similarity /// 0060348 // bone development // inferred from sequence or structural similarity /// 0070371 // ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0071260 // cellular response to mechanical stimulus // inferred from sequence or structural similarity /// 2000420 // negative regulation of eosinophil extravasation // inferred from direct assay </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004955 // prostaglandin receptor activity // inferred from electronic annotation /// 0004957 // prostaglandin E receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 133.90 </td> <td> 308.10 </td> <td> 5.29 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208954_s_at </td> <td> 208954_s_at </td> <td> BC003381 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003381.1 /DEF=Homo sapiens, clone MGC:5353, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:5353) /DB_XREF=gi:13097242 /UG=Hs.78851 KIAA0217 protein /FL=gb:BC003381.1 </td> <td> BC003381 </td> <td> La ribonucleoprotein domain family, member 4B </td> <td> LARP4B </td> <td> 23185 </td> <td> NM_015155 /// XM_005252431 /// XM_005252432 /// XM_005252433 /// XM_005252435 /// XM_006717436 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0042788 // polysomal ribosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 58.35 </td> <td> 82.85 </td> <td> 5.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 52164_at </td> <td> 52164_at </td> <td> AA065185 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AA065185:zm50e09.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-529096 /clone_end=3' /gb=AA065185 /gi=1559080 /ug=Hs.47008 /len=605 </td> <td> AA065185 </td> <td> chromosome 11 open reading frame 24 </td> <td> C11orf24 </td> <td> 53838 </td> <td> NM_022338 /// XM_005274053 /// XM_005274054 </td> <td>  </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 49.72 </td> <td> 95.86 </td> <td> 5.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208051_s_at </td> <td> 208051_s_at </td> <td> NM_006451 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006451.1 /DEF=Homo sapiens polyadenylate binding protein-interacting protein 1 (PAIP1), mRNA.  /FEA=mRNA /GEN=PAIP1 /PROD=polyadenylate binding protein-interactingprotein 1 /DB_XREF=gi:5453845 /UG=Hs.109643 polyadenylate binding protein-interacting protein 1 /FL=gb:AF013758.1 gb:NM_006451.1 </td> <td> NM_006451 </td> <td> poly(A) binding protein interacting protein 1 </td> <td> PAIP1 </td> <td> 10605 </td> <td> NM_006451 /// NM_182789 /// NM_183323 /// XM_005248230 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from direct assay /// 0048255 // mRNA stabilization // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from direct assay </td> <td> 54.55 </td> <td> 63.42 </td> <td> 5.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 205521_at </td> <td> 205521_at </td> <td> BF511976 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF511976 /FEA=EST /DB_XREF=gi:11595274 /DB_XREF=est:UI-H-BI4-apu-a-03-0-UI.s1 /CLONE=IMAGE:3088420 /UG=Hs.266258 endonuclease G-like 1 /FL=gb:AB020523.1 gb:NM_005107.1 </td> <td> BF511976 </td> <td> endo/exonuclease (5'-3'), endonuclease G-like </td> <td> EXOG </td> <td> 9941 </td> <td> NM_001145464 /// NM_005107 /// XM_005265633 /// XM_005265635 /// XM_006713442 /// XM_006713443 /// XM_006713444 /// XM_006713445 /// XM_006713446 /// XM_006713447 </td> <td> 0000737 // DNA catabolic process, endonucleolytic // not recorded /// 0008152 // metabolic process // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // not recorded /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 42.93 </td> <td> 24.26 </td> <td> 5.28 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218269_at </td> <td> 218269_at </td> <td> NM_013235 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013235.1 /DEF=Homo sapiens putative ribonuclease III (RNASE3L), mRNA. /FEA=mRNA /GEN=RNASE3L /PROD=putative ribonuclease III /DB_XREF=gi:7106396 /UG=Hs.49163 putative ribonuclease III /FL=gb:AF116910.1 gb:NM_013235.1 gb:AF189011.1 </td> <td> NM_013235 </td> <td> drosha, ribonuclease type III </td> <td> DROSHA </td> <td> 29102 </td> <td> NM_001100412 /// NM_013235 /// XM_005248291 /// XM_005248292 /// XM_005248293 /// XM_005248294 </td> <td> 0006396 // RNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010586 // miRNA metabolic process // inferred from electronic annotation /// 0016075 // rRNA catabolic process // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031053 // primary miRNA processing // inferred from direct assay /// 0031053 // primary miRNA processing // inferred from mutant phenotype /// 0031054 // pre-miRNA processing // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090501 // RNA phosphodiester bond hydrolysis // inferred from direct assay /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from direct assay /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation </td> <td> 0001530 // lipopolysaccharide binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004521 // endoribonuclease activity // inferred from electronic annotation /// 0004525 // ribonuclease III activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 59.60 </td> <td> 115.10 </td> <td> 5.27 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 211240_x_at </td> <td> 211240_x_at </td> <td> AB002382 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB002382.1 /DEF=Human mRNA for KIAA0384 gene, complete cds. /FEA=mRNA /GEN=KIAA0384 /DB_XREF=gi:2224708 /UG=Hs.166011 catenin (cadherin-associated protein), delta 1 /FL=gb:AB002382.1 </td> <td> AB002382 </td> <td> catenin (cadherin-associated protein), delta 1 /// TMX2-CTNND1 readthrough (NMD candidate) </td> <td> CTNND1 /// TMX2-CTNND1 </td> <td> 1500 /// 100528016 </td> <td> NM_001085458 /// NM_001085459 /// NM_001085460 /// NM_001085461 /// NM_001085462 /// NM_001085463 /// NM_001085464 /// NM_001085465 /// NM_001085466 /// NM_001085467 /// NM_001085468 /// NM_001085469 /// NM_001206883 /// NM_001206884 /// NM_001206885 /// NM_001206886 /// NM_001206887 /// NM_001206888 /// NM_001206889 /// NM_001206890 /// NM_001206891 /// NM_001331 /// NR_037646 </td> <td> 0001738 // morphogenesis of a polarized epithelium // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0060690 // epithelial cell differentiation involved in salivary gland development // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // inferred from physical interaction /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation </td> <td> 114.10 </td> <td> 286.60 </td> <td> 5.27 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212196_at </td> <td> 212196_at </td> <td> AW242916 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW242916 /FEA=EST /DB_XREF=gi:6576686 /DB_XREF=est:xn27f03.x1 /CLONE=IMAGE:2694941 /UG=Hs.71968 Homo sapiens mRNA; cDNA DKFZp564F053 (from clone DKFZp564F053) </td> <td> AW242916 </td> <td> interleukin 6 signal transducer </td> <td> IL6ST </td> <td> 3572 </td> <td> NM_001190981 /// NM_002184 /// NM_175767 /// NR_120480 /// XM_005248496 </td> <td> 0002675 // positive regulation of acute inflammatory response // inferred by curator /// 0002821 // positive regulation of adaptive immune response // inferred by curator /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008593 // regulation of Notch signaling pathway // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0034097 // response to cytokine // inferred from direct assay /// 0038154 // interleukin-11-mediated signaling pathway // inferred from electronic annotation /// 0038165 // oncostatin-M-mediated signaling pathway // inferred from mutant phenotype /// 0042102 // positive regulation of T cell proliferation // inferred from mutant phenotype /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048861 // leukemia inhibitory factor signaling pathway // inferred from genetic interaction /// 0070102 // interleukin-6-mediated signaling pathway // inferred from mutant phenotype /// 0070104 // negative regulation of interleukin-6-mediated signaling pathway // inferred from direct assay /// 0070106 // interleukin-27-mediated signaling pathway // inferred from mutant phenotype /// 0070120 // ciliary neurotrophic factor-mediated signaling pathway // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005896 // interleukin-6 receptor complex // inferred from direct assay /// 0005900 // oncostatin-M receptor complex // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070110 // ciliary neurotrophic factor receptor complex // inferred from direct assay </td> <td> 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004897 // ciliary neurotrophic factor receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from genetic interaction /// 0004921 // interleukin-11 receptor activity // inferred from electronic annotation /// 0004923 // leukemia inhibitory factor receptor activity // inferred from genetic interaction /// 0004924 // oncostatin-M receptor activity // inferred from direct assay /// 0005127 // ciliary neurotrophic factor receptor binding // inferred from physical interaction /// 0005138 // interleukin-6 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from physical interaction /// 0019970 // interleukin-11 binding // inferred from electronic annotation /// 0019981 // interleukin-6 binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // traceable author statement /// 0045509 // interleukin-27 receptor activity // inferred by curator </td> <td> -363.40 </td> <td> 724.15 </td> <td> -5.27 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209773_s_at </td> <td> 209773_s_at </td> <td> BC001886 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001886.1 /DEF=Homo sapiens, ribonucleotide reductase M2 polypeptide, clone MGC:1551, mRNA, complete cds.  /FEA=mRNA /PROD=ribonucleotide reductase M2 polypeptide /DB_XREF=gi:12804874 /UG=Hs.75319 ribonucleotide reductase M2 polypeptide /FL=gb:BC001886.1 </td> <td> BC001886 </td> <td> ribonucleotide reductase M2 </td> <td> RRM2 </td> <td> 6241 </td> <td> NM_001034 /// NM_001165931 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0009186 // deoxyribonucleoside diphosphate metabolic process // inferred from electronic annotation /// 0009262 // deoxyribonucleotide metabolic process // inferred from electronic annotation /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from sequence or structural similarity /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from sequence or structural similarity /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation </td> <td> 181.10 </td> <td> 387.50 </td> <td> 5.26 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 219279_at </td> <td> 219279_at </td> <td> NM_017718 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017718.1 /DEF=Homo sapiens hypothetical protein FLJ20220 (FLJ20220), mRNA. /FEA=mRNA /GEN=FLJ20220 /PROD=hypothetical protein FLJ20220 /DB_XREF=gi:8923209 /UG=Hs.21126 hypothetical protein FLJ20220 /FL=gb:NM_017718.1 </td> <td> NM_017718 </td> <td> dedicator of cytokinesis 10 </td> <td> DOCK10 </td> <td> 55619 </td> <td> NM_001290263 /// NM_014689 /// NM_017718 /// XM_005246672 /// XM_005246673 /// XM_005246674 /// XM_006712616 /// XM_006712617 /// XM_006712618 /// XM_006712619 /// XM_006712620 /// XM_006712621 /// XM_006712622 /// XM_006712623 /// XM_006712624 </td> <td> 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from direct assay /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation </td> <td> -70.13 </td> <td> 126.76 </td> <td> -5.26 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 211929_at </td> <td> 211929_at </td> <td> AA527502 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA527502 /FEA=EST /DB_XREF=gi:2269571 /DB_XREF=est:ng41f10.s1 /CLONE=IMAGE:937387 /UG=Hs.249247 heterogeneous nuclear protein similar to rat helix destabilizing protein </td> <td> AA527502 </td> <td> heterogeneous nuclear ribonucleoprotein A3 </td> <td> HNRNPA3 </td> <td> 220988 </td> <td> NM_194247 /// XM_005246380 /// XM_005246381 /// XM_005246382 /// XM_006712365 /// XR_427076 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 159.08 </td> <td> 213.96 </td> <td> 5.26 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203811_s_at </td> <td> 203811_s_at </td> <td> NM_007034 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007034.2 /DEF=Homo sapiens DnaJ-like heat shock protein 40 (HLJ1), mRNA. /FEA=mRNA /GEN=HLJ1 /PROD=DnaJ-like heat shock protein 40 /DB_XREF=gi:6631084 /UG=Hs.41693 DnaJ (Hsp40) homolog, subfamily B, member 4 /FL=gb:U40992.2 gb:NM_007034.2 </td> <td> NM_007034 </td> <td> DnaJ (Hsp40) homolog, subfamily B, member 4 </td> <td> DNAJB4 </td> <td> 11080 </td> <td> NM_007034 /// XM_005270397 /// XM_006710308 </td> <td> 0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0009408 // response to heat // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> 131.83 </td> <td> 185.66 </td> <td> 5.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201904_s_at </td> <td> 201904_s_at </td> <td> BF031714 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF031714 /FEA=EST /DB_XREF=gi:10739426 /DB_XREF=est:601558023F1 /CLONE=IMAGE:3827909 /UG=Hs.147189 HYA22 protein /FL=gb:D88153.1 gb:NM_005808.1 </td> <td> BF031714 </td> <td> CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like </td> <td> CTDSPL </td> <td> 10217 </td> <td> NM_001008392 /// NM_005808 /// XM_006712922 /// XM_006712923 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 60.25 </td> <td> 43.42 </td> <td> 5.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202733_at </td> <td> 202733_at </td> <td> NM_004199 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004199.1 /DEF=Homo sapiens procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide II (P4HA2), mRNA.  /FEA=mRNA /GEN=P4HA2 /PROD=procollagen-proline, 2-oxoglutarate4-dioxygenase (proline 4-hydroxylase), alpha polypeptideII /DB_XREF=gi:4758867 /UG=Hs.3622 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide II /FL=gb:U90441.1 gb:NM_004199.1 </td> <td> NM_004199 </td> <td> uncharacterized LOC101927705 /// prolyl 4-hydroxylase, alpha polypeptide II </td> <td> LOC101927705 /// P4HA2 </td> <td> 8974 /// 101927705 </td> <td> NM_001017973 /// NM_001017974 /// NM_001142598 /// NM_001142599 /// NM_004199 /// XM_005272116 /// XM_005272117 /// XM_005272118 /// XM_005272119 /// XM_005272120 /// XM_005272122 /// XM_006714728 /// XM_006714729 /// XM_006714730 /// XM_006714731 /// XR_246585 /// XR_249830 /// XR_251870 </td> <td> 0018401 // peptidyl-proline hydroxylation to 4-hydroxy-L-proline // inferred from electronic annotation /// 0019511 // peptidyl-proline hydroxylation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0004656 // procollagen-proline 4-dioxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -120.40 </td> <td> 230.55 </td> <td> -5.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 213010_at </td> <td> 213010_at </td> <td> AI088622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI088622 /FEA=EST /DB_XREF=gi:3427681 /DB_XREF=est:qb14f06.x1 /CLONE=IMAGE:1696259 /UG=Hs.85181 v-raf-1 murine leukemia viral oncogene homolog 1 </td> <td> AI088622 </td> <td> protein kinase C, delta binding protein </td> <td> PRKCDBP </td> <td> 112464 </td> <td> NM_145040 </td> <td>  </td> <td> 0005901 // caveola // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 56.25 </td> <td> 254.50 </td> <td> 5.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201924_at </td> <td> 201924_at </td> <td> NM_005935 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005935.1 /DEF=Homo sapiens myeloidlymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to, 2 (MLLT2), mRNA.  /FEA=mRNA /GEN=MLLT2 /PROD=myeloidlymphoid or mixed-lineage leukemia(trithorax (Drosophila) homolog); translocated to, 2 /DB_XREF=gi:5174572 /UG=Hs.114765 myeloidlymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to, 2 /FL=gb:L13773.1 gb:L25050.1 gb:NM_005935.1 </td> <td> NM_005935 </td> <td> AF4/FMR2 family, member 1 </td> <td> AFF1 </td> <td> 4299 </td> <td> NM_001166693 /// NM_005935 /// XM_005263007 /// XM_005263008 /// XM_005263009 /// XM_005263010 /// XM_005263011 /// XM_005263012 /// XM_005263013 </td> <td> 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 217.55 </td> <td> 216.57 </td> <td> 5.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201037_at </td> <td> 201037_at </td> <td> NM_002627 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002627.1 /DEF=Homo sapiens phosphofructokinase, platelet (PFKP), mRNA. /FEA=mRNA /GEN=PFKP /PROD=phosphofructokinase, platelet /DB_XREF=gi:11321600 /UG=Hs.99910 phosphofructokinase, platelet /FL=gb:NM_002627.1 gb:BC002536.1 gb:M64784.1 gb:D25328.1 </td> <td> NM_002627 </td> <td> phosphofructokinase, platelet </td> <td> PFKP </td> <td> 5214 </td> <td> NM_001242339 /// NM_002627 /// XM_005252465 /// XM_005252466 /// XM_005252467 /// XM_006717449 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006002 // fructose 6-phosphate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046835 // carbohydrate phosphorylation // inferred from electronic annotation /// 0046835 // carbohydrate phosphorylation // inferred from sequence or structural similarity /// 0046835 // carbohydrate phosphorylation // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005945 // 6-phosphofructokinase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003872 // 6-phosphofructokinase activity // inferred from sequence or structural similarity /// 0003872 // 6-phosphofructokinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -287.78 </td> <td> 1265.74 </td> <td> -5.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202038_at </td> <td> 202038_at </td> <td> NM_004788 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004788.1 /DEF=Homo sapiens ubiquitination factor E4A (homologous to yeast UFD2) (UBE4A), mRNA.  /FEA=mRNA /GEN=UBE4A /PROD=ubiquitination factor E4A (homologous to yeastUFD2) /DB_XREF=gi:4759287 /UG=Hs.75275 ubiquitination factor E4A (homologous to yeast UFD2) /FL=gb:D50916.1 gb:NM_004788.1 </td> <td> NM_004788 </td> <td> ubiquitination factor E4A </td> <td> UBE4A </td> <td> 9354 </td> <td> NM_001204077 /// NM_004788 </td> <td> 0000209 // protein polyubiquitination // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from electronic annotation </td> <td> 90.80 </td> <td> 266.00 </td> <td> 5.25 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212614_at </td> <td> 212614_at </td> <td> BG285011 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG285011 /FEA=EST /DB_XREF=gi:13036541 /DB_XREF=est:602409278F1 /CLONE=IMAGE:4538275 /UG=Hs.12702 Homo sapiens mRNA; cDNA DKFZp586N012 (from clone DKFZp586N012) </td> <td> BG285011 </td> <td> AT rich interactive domain 5B (MRF1-like) </td> <td> ARID5B </td> <td> 84159 </td> <td> NM_001244638 /// NM_032199 </td> <td> 0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0048644 // muscle organ morphogenesis // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0060021 // palate development // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from sequence or structural similarity /// 0060613 // fat pad development // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay </td> <td> -48.63 </td> <td> 75.81 </td> <td> -5.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201198_s_at </td> <td> 201198_s_at </td> <td> AI860431 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI860431 /FEA=EST /DB_XREF=gi:5514047 /DB_XREF=est:wl13h07.x1 /CLONE=IMAGE:2424829 /UG=Hs.3887 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 /FL=gb:D44466.1 gb:NM_002807.1 </td> <td> AI860431 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 </td> <td> PSMD1 </td> <td> 5707 </td> <td> NM_001191037 /// NM_002807 /// NR_034059 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005838 // proteasome regulatory particle // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation </td> <td> 96.32 </td> <td> 455.69 </td> <td> 5.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 214771_x_at </td> <td> 214771_x_at </td> <td> AK025604 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK025604.1 /DEF=Homo sapiens cDNA: FLJ21951 fis, clone HEP04968. /FEA=mRNA /DB_XREF=gi:10438172 /UG=Hs.84883 KIAA0864 protein </td> <td> AK025604 </td> <td> myosin phosphatase Rho interacting protein </td> <td> MPRIP </td> <td> 23164 </td> <td> NM_015134 /// NM_201274 /// XM_005256563 /// XM_005256564 /// XM_006721487 /// XM_006721488 /// XM_006721489 /// XM_006721490 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> -101.63 </td> <td> 524.89 </td> <td> -5.24 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201089_at </td> <td> 201089_at </td> <td> NM_001693 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001693.1 /DEF=Homo sapiens ATPase, H+ transporting, lysosomal (vacuolar proton pump), beta polypeptide, 5658kD, isoform 2 (ATP6B2), mRNA.  /FEA=mRNA /GEN=ATP6B2 /PROD=ATPase, H+ transporting, lysosomal (vacuolarproton pump), beta polypeptide, 5658kD, isoform 2 /DB_XREF=gi:4502310 /UG=Hs.1697 ATPase, H+ transporting, lysosomal (vacuolar proton pump), beta polypeptide, 5658kD, isoform 2 /FL=gb:BC003100.1 gb:NM_001693.1 gb:L35249.1 </td> <td> NM_001693 </td> <td> ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 </td> <td> ATP6V1B2 </td> <td> 526 </td> <td> NM_001693 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0033572 // transferrin transport // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005902 // microvillus // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005524 // ATP binding // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // traceable author statement </td> <td> -69.75 </td> <td> 347.77 </td> <td> -5.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218007_s_at </td> <td> 218007_s_at </td> <td> NM_015920 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015920.1 /DEF=Homo sapiens 40S ribosomal protein S27 isoform (LOC51065), mRNA. /FEA=mRNA /GEN=LOC51065 /PROD=40S ribosomal protein S27 isoform /DB_XREF=gi:7705705 /UG=Hs.108957 40S ribosomal protein S27 isoform /FL=gb:BC003667.1 gb:AF070668.1 gb:NM_015920.1 </td> <td> NM_015920 </td> <td> ribosomal protein S27-like </td> <td> RPS27L </td> <td> 51065 </td> <td> NM_015920 </td> <td> 0006281 // DNA repair // inferred from mutant phenotype /// 0006412 // translation // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0031571 // mitotic G1 DNA damage checkpoint // inferred from mutant phenotype /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from direct assay /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 299.90 </td> <td> 1505.53 </td> <td> 5.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 215773_x_at </td> <td> 215773_x_at </td> <td> AJ236912 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AJ236912.1 /DEF=Homo sapiens mRNA for poly-(ADP-ribose) polymerase II. /FEA=mRNA /GEN=PARP2 /PROD=poly-(ADP-ribose) polymerase II /DB_XREF=gi:6688129 /UG=Hs.24284 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 2 </td> <td> AJ236912 </td> <td> poly (ADP-ribose) polymerase 2 </td> <td> PARP2 </td> <td> 10038 </td> <td> NM_001042618 /// NM_005484 /// XM_005267247 </td> <td> 0006281 // DNA repair // traceable author statement /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0097191 // extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> 54.55 </td> <td> 175.97 </td> <td> 5.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212103_at </td> <td> 212103_at </td> <td> BG403834 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG403834 /FEA=EST /DB_XREF=gi:13297282 /DB_XREF=est:602419675F1 /CLONE=IMAGE:4526611 /UG=Hs.301553 karyopherin alpha 6 (importin alpha 7) /FL=gb:AF060543.1 gb:NM_012316.1 </td> <td> BG403834 </td> <td> karyopherin alpha 6 (importin alpha 7) </td> <td> KPNA6 </td> <td> 23633 </td> <td> NM_012316 /// XM_005270711 </td> <td> 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> 77.22 </td> <td> 105.56 </td> <td> 5.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 221847_at </td> <td> 221847_at </td> <td> BF665706 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF665706 /FEA=EST /DB_XREF=gi:11939601 /DB_XREF=est:602124033F1 /CLONE=IMAGE:4280744 /UG=Hs.45033 lacrimal proline rich protein </td> <td> BF665706 </td> <td> chromosome X open reading frame 69-like </td> <td> LOC100129361 </td> <td> 100129361 </td> <td> NM_001271592 /// NR_036583 </td> <td>  </td> <td>  </td> <td>  </td> <td> 68.05 </td> <td> 102.22 </td> <td> 5.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218973_at </td> <td> 218973_at </td> <td> NM_024580 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024580.1 /DEF=Homo sapiens hypothetical protein FLJ13119 (FLJ13119), mRNA. /FEA=mRNA /GEN=FLJ13119 /PROD=hypothetical protein FLJ13119 /DB_XREF=gi:13375759 /UG=Hs.19348 hypothetical protein FLJ13119 /FL=gb:NM_024580.1 </td> <td> NM_024580 </td> <td> elongation factor Tu GTP binding domain containing 1 </td> <td> EFTUD1 </td> <td> 79631 </td> <td> NM_001040610 /// NM_024580 </td> <td> 0006184 // GTP catabolic process // inferred from direct assay /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042256 // mature ribosome assembly // inferred from mutant phenotype </td> <td>  </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from mutant phenotype </td> <td> -71.87 </td> <td> 172.74 </td> <td> -5.23 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218096_at </td> <td> 218096_at </td> <td> NM_018361 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018361.1 /DEF=Homo sapiens hypothetical protein FLJ11210 (FLJ11210), mRNA. /FEA=mRNA /GEN=FLJ11210 /PROD=hypothetical protein FLJ11210 /DB_XREF=gi:8922941 /UG=Hs.27842 hypothetical protein FLJ11210 /FL=gb:NM_018361.1 </td> <td> NM_018361 </td> <td> 1-acylglycerol-3-phosphate O-acyltransferase 5 </td> <td> AGPAT5 </td> <td> 55326 </td> <td> NM_018361 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006639 // acylglycerol metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006654 // phosphatidic acid biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // non-traceable author statement /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation </td> <td> 61.25 </td> <td> 320.75 </td> <td> 5.22 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218546_at </td> <td> 218546_at </td> <td> NM_024709 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024709.1 /DEF=Homo sapiens hypothetical protein FLJ14146 (FLJ14146), mRNA. /FEA=mRNA /GEN=FLJ14146 /PROD=hypothetical protein FLJ14146 /DB_XREF=gi:13376004 /UG=Hs.103395 hypothetical protein FLJ14146 /FL=gb:NM_024709.1 </td> <td> NM_024709 </td> <td> chromosome 1 open reading frame 115 </td> <td> C1orf115 </td> <td> 79762 </td> <td> NM_024709 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 95.98 </td> <td> 106.14 </td> <td> 5.21 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 207173_x_at </td> <td> 207173_x_at </td> <td> D21254 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D21254.1 /DEF=Human mRNA for OB-cadherin-1, complete cds. /FEA=mRNA /GEN=osf-4 /PROD=OB-cadherin-1 /DB_XREF=gi:575577 /UG=Hs.75929 cadherin 11, type 2, OB-cadherin (osteoblast) /FL=gb:NM_001797.1 gb:L34056.1 gb:D21254.1 </td> <td> D21254 </td> <td> cadherin 11, type 2, OB-cadherin (osteoblast) </td> <td> CDH11 </td> <td> 1009 </td> <td> NM_001797 /// XM_005255761 /// XM_005255762 /// XM_005255763 /// XM_005255764 /// XM_005255766 /// XM_005255767 </td> <td> 0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // non-traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // non-traceable author statement /// 0021957 // corticospinal tract morphogenesis // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -86.23 </td> <td> 254.41 </td> <td> -5.21 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212667_at </td> <td> 212667_at </td> <td> AL575922 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL575922 /FEA=EST /DB_XREF=gi:12937561 /DB_XREF=est:AL575922 /CLONE=CS0DI067YN03 (3 prime) /UG=Hs.111779 secreted protein, acidic, cysteine-rich (osteonectin) </td> <td> AL575922 </td> <td> secreted protein, acidic, cysteine-rich (osteonectin) </td> <td> SPARC </td> <td> 6678 </td> <td> NM_003118 </td> <td> 0001503 // ossification // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009629 // response to gravity // inferred from electronic annotation /// 0010288 // response to lead ion // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0060348 // bone development // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation </td> <td> 126.67 </td> <td> 633.79 </td> <td> 5.21 </td> <td> 0.00 </td> <td> 0.00 </td> <td> -4.45 </td> </tr>
  <tr> <td> 217959_s_at </td> <td> 217959_s_at </td> <td> NM_016146 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016146.1 /DEF=Homo sapiens PTD009 protein (PTD009), mRNA. /FEA=mRNA /GEN=PTD009 /PROD=PTD009 protein /DB_XREF=gi:7706666 /UG=Hs.279901 PTD009 protein /FL=gb:AF151862.1 gb:AF078862.1 gb:AF161520.1 gb:NM_016146.1 </td> <td> NM_016146 </td> <td> microRNA 3656 /// trafficking protein particle complex 4 </td> <td> MIR3656 /// TRAPPC4 </td> <td> 51399 /// 100500840 </td> <td> NM_016146 /// NR_037429 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016358 // dendrite development // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from sequence or structural similarity /// 0005801 // cis-Golgi network // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0030008 // TRAPP complex // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 78.80 </td> <td> 210.95 </td> <td> 5.20 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208093_s_at </td> <td> 208093_s_at </td> <td> NM_030808 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030808.1 /DEF=Homo sapiens LIS1-interacting protein NUDEL; endooligopeptidase A (NUDEL), mRNA.  /FEA=mRNA /GEN=NUDEL /PROD=LIS1-interacting protein NUDEL;endooligopeptidase A /DB_XREF=gi:13540599 /FL=gb:NM_030808.1 </td> <td> NM_030808 </td> <td> nudE neurodevelopment protein 1-like 1 </td> <td> NDEL1 </td> <td> 81565 </td> <td> NM_001025579 /// NM_030808 /// XM_005256806 /// XM_006721580 /// XM_006721581 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0001833 // inner cell mass cell proliferation // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008090 // retrograde axon cargo transport // inferred from electronic annotation /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021799 // cerebral cortex radially oriented cell migration // inferred from electronic annotation /// 0021955 // central nervous system neuron axonogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032864 // activation of Cdc42 GTPase activity // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0047496 // vesicle transport along microtubule // inferred from electronic annotation /// 0048680 // positive regulation of axon regeneration // inferred from electronic annotation /// 0051081 // nuclear envelope disassembly // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0060053 // neurofilament cytoskeleton // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0070012 // oligopeptidase activity // inferred from electronic annotation </td> <td> 61.75 </td> <td> 195.53 </td> <td> 5.20 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201449_at </td> <td> 201449_at </td> <td> AL567227 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL567227 /FEA=EST /DB_XREF=gi:12920378 /DB_XREF=est:AL567227 /CLONE=CS0DF027YA11 (3 prime) /UG=Hs.239489 TIA1 cytotoxic granule-associated RNA-binding protein /FL=gb:NM_022037.1 gb:M77142.1 </td> <td> AL567227 </td> <td> TIA1 cytotoxic granule-associated RNA binding protein </td> <td> TIA1 </td> <td> 7072 </td> <td> NM_022037 /// NM_022173 /// XM_005264524 /// XM_005264525 /// XM_005264526 /// XM_005264527 /// XM_005264528 /// XM_005264530 /// XM_005264531 /// XM_005264532 /// XM_005264533 /// XR_244953 /// XR_244954 /// XR_244955 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0042036 // negative regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0048024 // regulation of mRNA splicing, via spliceosome // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0097165 // nuclear stress granule // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 46.55 </td> <td> 60.07 </td> <td> 5.20 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 204312_x_at </td> <td> 204312_x_at </td> <td> AI655737 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI655737 /FEA=EST /DB_XREF=gi:4739716 /DB_XREF=est:tt14h05.x1 /CLONE=IMAGE:2240793 /UG=Hs.79194 cAMP responsive element binding protein 1 /FL=gb:M27691.1 gb:NM_004379.1 </td> <td> AI655737 </td> <td> cAMP responsive element binding protein 1 </td> <td> CREB1 </td> <td> 1385 </td> <td> NM_004379 /// NM_134442 /// XR_241289 /// XR_241290 /// XR_241292 /// XR_427071 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007595 // lactation // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010033 // response to organic substance // inferred from direct assay /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0033363 // secretory granule organization // inferred from electronic annotation /// 0033762 // response to glucagon // inferred from sequence or structural similarity /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045600 // positive regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0046889 // positive regulation of lipid biosynthetic process // inferred from sequence or structural similarity /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060428 // lung epithelium development // inferred from electronic annotation /// 0060430 // lung saccule development // inferred from electronic annotation /// 0060509 // Type I pneumocyte differentiation // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred by curator /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -47.32 </td> <td> 91.79 </td> <td> -5.19 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 219008_at </td> <td> 219008_at </td> <td> NM_021925 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021925.1 /DEF=Homo sapiens hypothetical protein FLJ21820 (FLJ21820), mRNA. /FEA=mRNA /GEN=FLJ21820 /PROD=hypothetical protein FLJ21820 /DB_XREF=gi:11345457 /UG=Hs.63300 hypothetical protein FLJ21820 /FL=gb:NM_021925.1 </td> <td> NM_021925 </td> <td> chromosome 2 open reading frame 43 </td> <td> C2orf43 </td> <td> 60526 </td> <td> NM_001282719 /// NM_001282720 /// NM_001282721 /// NM_001282722 /// NM_001282723 /// NM_001282724 /// NM_021925 /// NR_104233 /// XR_426990 /// XR_426991 /// XR_426992 </td> <td>  </td> <td>  </td> <td>  </td> <td> 42.40 </td> <td> 46.80 </td> <td> 5.19 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 210524_x_at </td> <td> 210524_x_at </td> <td> AF078844 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF078844.1 /DEF=Homo sapiens hqp0376 protein mRNA, complete cds. /FEA=mRNA /PROD=hqp0376 protein /DB_XREF=gi:6683748 /UG=Hs.8765 RNA helicase-related protein /FL=gb:AF078844.1 </td> <td> AF078844 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0071276 // cellular response to cadmium ion // inferred from expression pattern /// 0071294 // cellular response to zinc ion // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -97.30 </td> <td> 203.70 </td> <td> -5.19 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201630_s_at </td> <td> 201630_s_at </td> <td> NM_004300 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004300.1 /DEF=Homo sapiens acid phosphatase 1, soluble (ACP1), transcript variant a, mRNA.  /FEA=mRNA /GEN=ACP1 /PROD=acid phosphatase 1 isoform a /DB_XREF=gi:4757713 /UG=Hs.75393 acid phosphatase 1, soluble /FL=gb:M83653.1 gb:NM_004300.1 </td> <td> NM_004300 </td> <td> acid phosphatase 1, soluble </td> <td> ACP1 </td> <td> 52 </td> <td> NM_001040649 /// NM_004300 /// NM_007099 /// NM_177554 /// NR_024080 /// XR_426957 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0009898 // cytoplasmic side of plasma membrane // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003993 // acid phosphatase activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation </td> <td> 64.72 </td> <td> 293.59 </td> <td> 5.19 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 213144_at </td> <td> 213144_at </td> <td> AI074611 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI074611 /FEA=EST /DB_XREF=gi:3401255 /DB_XREF=est:oy99c09.x1 /CLONE=IMAGE:1673968 /UG=Hs.100651 golgi SNAP receptor complex member 2 </td> <td> AI074611 </td> <td> golgi SNAP receptor complex member 2 </td> <td> GOSR2 </td> <td> 9570 </td> <td> NM_001012511 /// NM_004287 /// NM_054022 /// XM_005257843 /// XM_005257844 /// XM_005257845 /// XM_006722188 /// XM_006722189 /// XM_006722190 /// XM_006722191 /// XM_006722192 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0061025 // membrane fusion // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005215 // transporter activity // traceable author statement </td> <td> 45.50 </td> <td> 67.58 </td> <td> 5.18 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 207573_x_at </td> <td> 207573_x_at </td> <td> NM_006476 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006476.1 /DEF=Homo sapiens ATP synthase, H+ transporting, mitochondrial F1F0, subunit g (ATP5JG), mRNA.  /FEA=mRNA /GEN=ATP5JG /PROD=ATP synthase, H+ transporting, mitochondrialF1F0, subunit g /DB_XREF=gi:5453560 /UG=Hs.107476 ATP synthase, H+ transporting, mitochondrial F1F0, subunit g /FL=gb:AF092124.1 gb:NM_006476.1 </td> <td> NM_006476 </td> <td> ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G </td> <td> ATP5L </td> <td> 10632 </td> <td> NM_006476 /// NR_033759 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator </td> <td> 155.60 </td> <td> 937.98 </td> <td> 5.18 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218397_at </td> <td> 218397_at </td> <td> NM_018062 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018062.1 /DEF=Homo sapiens hypothetical protein FLJ10335 (FLJ10335), mRNA. /FEA=mRNA /GEN=FLJ10335 /PROD=hypothetical protein FLJ10335 /DB_XREF=gi:8922359 /UG=Hs.279841 hypothetical protein FLJ10335 /FL=gb:NM_018062.1 </td> <td> NM_018062 </td> <td> Fanconi anemia, complementation group L </td> <td> FANCL </td> <td> 55120 </td> <td> NM_001114636 /// NM_018062 /// XM_005264395 /// XM_005264397 /// XM_006712038 /// XR_426986 </td> <td> 0006281 // DNA repair // inferred from mutant phenotype /// 0006281 // DNA repair // traceable author statement /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from mutant phenotype /// 0007276 // gamete generation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from sequence or structural similarity /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 46.65 </td> <td> 45.52 </td> <td> 5.18 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200692_s_at </td> <td> 200692_s_at </td> <td> NM_004134 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004134.1 /DEF=Homo sapiens heat shock 70kD protein 9B (mortalin-2) (HSPA9B), mRNA.  /FEA=mRNA /GEN=HSPA9B /PROD=heat shock 70kD protein 9B (mortalin-2) /DB_XREF=gi:4758569 /UG=Hs.3069 heat shock 70kD protein 9B (mortalin-2) /FL=gb:BC000478.1 gb:L15189.1 gb:NM_004134.1 </td> <td> NM_004134 </td> <td> heat shock 70kDa protein 9 (mortalin) </td> <td> HSPA9 </td> <td> 3313 </td> <td> NM_004134 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // traceable author statement </td> <td> -179.95 </td> <td> 388.98 </td> <td> -5.18 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203013_at </td> <td> 203013_at </td> <td> NM_007265 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007265.1 /DEF=Homo sapiens suppressor of S. cerevisiae gcr2 (HSGT1), mRNA. /FEA=mRNA /GEN=HSGT1 /PROD=suppressor of S. cerevisiae gcr2 /DB_XREF=gi:6005783 /UG=Hs.19673 suppressor of S. cerevisiae gcr2 /FL=gb:BC000721.1 gb:D88208.1 gb:NM_007265.1 </td> <td> NM_007265 </td> <td> ecdysoneless homolog (Drosophila) </td> <td> ECD </td> <td> 11319 </td> <td> NM_001135752 /// NM_001135753 /// NM_007265 /// NR_024203 </td> <td> 0006110 // regulation of glycolytic process // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 2000045 // regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 60.88 </td> <td> 115.94 </td> <td> 5.17 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201894_s_at </td> <td> 201894_s_at </td> <td> NM_001920 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001920.1 /DEF=Homo sapiens decorin (DCN), mRNA. /FEA=mRNA /GEN=DCN /PROD=decorin /DB_XREF=gi:4503270 /UG=Hs.76152 decorin /FL=gb:M14219.1 gb:NM_001920.1 gb:AF138300.1 gb:AF138304.1 </td> <td> NM_001920 </td> <td> signal sequence receptor, alpha </td> <td> SSR1 </td> <td> 6745 </td> <td> NM_001292008 /// NM_003144 /// NR_120448 </td> <td> 0001822 // kidney development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0019800 // peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // traceable author statement /// 0030207 // chondroitin sulfate catabolic process // traceable author statement /// 0030208 // dermatan sulfate biosynthetic process // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005589 // collagen type VI trimer // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005796 // Golgi lumen // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation </td> <td> 85.22 </td> <td> 352.96 </td> <td> 5.17 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218536_at </td> <td> 218536_at </td> <td> AF052167 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF052167.1 /DEF=Homo sapiens clone 24749 and 24750 mRNA sequences. /FEA=mRNA /DB_XREF=gi:3360478 /UG=Hs.30057 transporter similar to yeast MRS2 /FL=gb:NM_020662.1 gb:AF288288.1 </td> <td> AF052167 </td> <td> MRS2 magnesium transporter </td> <td> MRS2 </td> <td> 57380 </td> <td> NM_001286264 /// NM_001286265 /// NM_001286266 /// NM_020662 /// NR_104423 /// XM_005249242 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015693 // magnesium ion transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0015095 // magnesium ion transmembrane transporter activity // inferred from electronic annotation </td> <td> 46.55 </td> <td> 52.57 </td> <td> 5.17 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212301_at </td> <td> 212301_at </td> <td> D87440 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D87440.1 /DEF=Human mRNA for KIAA0252 gene, partial cds. /FEA=mRNA /GEN=KIAA0252 /DB_XREF=gi:1665770 /UG=Hs.83419 KIAA0252 protein </td> <td> D87440 </td> <td> Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) </td> <td> RTF1 </td> <td> 23168 </td> <td> NM_015138 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001711 // endodermal cell fate commitment // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006352 // DNA-templated transcription, initiation // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016570 // histone modification // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from direct assay /// 0032968 // positive regulation of transcription elongation from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from electronic annotation /// 0080182 // histone H3-K4 trimethylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016593 // Cdc73/Paf1 complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 53.38 </td> <td> 162.01 </td> <td> 5.17 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209652_s_at </td> <td> 209652_s_at </td> <td> BC001422 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001422.1 /DEF=Homo sapiens, Similar to placental growth factor, vascular endothelial growth factor-related protein, clone MGC:1683, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to placental growth factor, vascularendothelial growth factor-related protein /DB_XREF=gi:12802997 /UG=Hs.2894 placental growth factor, vascular endothelial growth factor-related protein /FL=gb:BC001422.1 gb:S72960.1 </td> <td> BC001422 </td> <td> placental growth factor </td> <td> PGF </td> <td> 5228 </td> <td> NM_001207012 /// NM_001293643 /// NM_002632 /// XM_005267761 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060688 // regulation of morphogenesis of a branching structure // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from mutant phenotype /// 0008201 // heparin binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 167.22 </td> <td> 485.76 </td> <td> 5.17 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 214812_s_at </td> <td> 214812_s_at </td> <td> D80006 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D80006.1 /DEF=Human mRNA for KIAA0184 gene, partial cds. /FEA=mRNA /GEN=KIAA0184 /DB_XREF=gi:1136427 /UG=Hs.322903 KIAA0184 protein </td> <td> D80006 </td> <td> MOB kinase activator 1A </td> <td> MOB1A </td> <td> 55233 </td> <td> NM_018221 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0035329 // hippo signaling // inferred from direct assay /// 0035329 // hippo signaling // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 104.98 </td> <td> 241.29 </td> <td> 5.17 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201071_x_at </td> <td> 201071_x_at </td> <td> NM_012433 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012433.1 /DEF=Homo sapiens splicing factor 3b, subunit 1, 155kD (SF3B1), mRNA. /FEA=mRNA /GEN=SF3B1 /PROD=splicing factor 3b, subunit 1, 155kD /DB_XREF=gi:6912653 /UG=Hs.13453 splicing factor 3b, subunit 1, 155kD /FL=gb:AF054284.1 gb:NM_012433.1 </td> <td> NM_012433 </td> <td> splicing factor 3b, subunit 1, 155kDa </td> <td> SF3B1 </td> <td> 23451 </td> <td> NM_001005526 /// NM_012433 /// XM_005246428 /// XR_241300 /// XR_241301 /// XR_241302 </td> <td> 0000375 // RNA splicing, via transesterification reactions // non-traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // non-traceable author statement /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -159.50 </td> <td> 967.62 </td> <td> -5.16 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202765_s_at </td> <td> 202765_s_at </td> <td> AI264196 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI264196 /FEA=EST /DB_XREF=gi:3872399 /DB_XREF=est:qi20h04.x1 /CLONE=IMAGE:1857079 /UG=Hs.750 fibrillin 1 (Marfan syndrome) /FL=gb:L13923.1 gb:NM_000138.1 </td> <td> AI264196 </td> <td> fibrillin 1 </td> <td> FBN1 </td> <td> 2200 </td> <td> NM_000138 </td> <td> 0001501 // skeletal system development // inferred from mutant phenotype /// 0001822 // kidney development // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0035582 // sequestering of BMP in extracellular matrix // inferred from sequence or structural similarity /// 0035583 // sequestering of TGFbeta in extracellular matrix // inferred from sequence or structural similarity </td> <td> 0001527 // microfibril // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from direct assay /// 0005604 // basement membrane // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005201 // extracellular matrix structural constituent // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> -142.53 </td> <td> 175.09 </td> <td> -5.16 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201412_at </td> <td> 201412_at </td> <td> NM_014045 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014045.1 /DEF=Homo sapiens DKFZP564C1940 protein (DKFZP564C1940), mRNA. /FEA=mRNA /GEN=DKFZP564C1940 /PROD=DKFZP564C1940 protein /DB_XREF=gi:13027587 /UG=Hs.3804 DKFZP564C1940 protein /FL=gb:BC000424.1 gb:NM_014045.1 gb:AF131760.1 </td> <td> NM_014045 </td> <td> low density lipoprotein receptor-related protein 10 </td> <td> LRP10 </td> <td> 26020 </td> <td> NM_014045 /// XM_005267510 </td> <td> 0006897 // endocytosis // inferred from electronic annotation </td> <td> 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 91.90 </td> <td> 437.30 </td> <td> 5.16 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218140_x_at </td> <td> 218140_x_at </td> <td> NM_021203 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021203.1 /DEF=Homo sapiens APMCF1 protein (APMCF1), mRNA. /FEA=mRNA /GEN=APMCF1 /PROD=APMCF1 protein /DB_XREF=gi:10864014 /UG=Hs.12152 APMCF1 protein /FL=gb:NM_021203.1 gb:AF141882.1 </td> <td> NM_021203 </td> <td> signal recognition particle receptor, B subunit </td> <td> SRPRB </td> <td> 58477 </td> <td> NM_021203 </td> <td> 0006412 // translation // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008199 // ferric iron binding // inferred from electronic annotation </td> <td> 110.10 </td> <td> 249.38 </td> <td> 5.15 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218882_s_at </td> <td> 218882_s_at </td> <td> NM_006784 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006784.1 /DEF=Homo sapiens WD repeat domain 3 (WDR3), mRNA. /FEA=mRNA /GEN=WDR3 /PROD=WD repeat-containing protein 3 /DB_XREF=gi:5803220 /UG=Hs.33085 WD repeat domain 3 /FL=gb:AF083217.1 gb:NM_006784.1 </td> <td> NM_006784 </td> <td> WD repeat domain 3 </td> <td> WDR3 </td> <td> 10885 </td> <td> NM_006784 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0036126 // sperm flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 63.27 </td> <td> 109.69 </td> <td> 5.15 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203427_at </td> <td> 203427_at </td> <td> NM_014034 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014034.1 /DEF=Homo sapiens DKFZP547E2110 protein (DKFZP547E2110), mRNA. /FEA=mRNA /GEN=DKFZP547E2110 /PROD=DKFZP547E2110 protein /DB_XREF=gi:7661591 /UG=Hs.108110 DKFZP547E2110 protein /FL=gb:AL050261.1 gb:AF151856.1 gb:AF161495.1 gb:NM_014034.1 gb:AB028628.1 </td> <td> NM_014034 </td> <td> anti-silencing function 1A histone chaperone </td> <td> ASF1A </td> <td> 25842 </td> <td> NM_014034 </td> <td> 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006281 // DNA repair // inferred from direct assay /// 0006333 // chromatin assembly or disassembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // inferred from direct assay /// 0006335 // DNA replication-dependent nucleosome assembly // inferred from direct assay /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0031936 // negative regulation of chromatin silencing // non-traceable author statement /// 0042692 // muscle cell differentiation // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0043234 // protein complex // inferred from direct assay </td> <td> 0003682 // chromatin binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay </td> <td> 51.73 </td> <td> 93.41 </td> <td> 5.15 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 219137_s_at </td> <td> 219137_s_at </td> <td> NM_020194 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020194.1 /DEF=Homo sapiens GL004 protein (GL004), mRNA. /FEA=mRNA /GEN=GL004 /PROD=GL004 protein /DB_XREF=gi:9910247 /UG=Hs.7045 GL004 protein /FL=gb:AF226049.1 gb:NM_020194.1 </td> <td> NM_020194 </td> <td> mitochondrial fission factor </td> <td> MFF </td> <td> 56947 </td> <td> NM_001277061 /// NM_001277062 /// NM_001277063 /// NM_001277064 /// NM_001277065 /// NM_001277066 /// NM_001277067 /// NM_001277068 /// NM_020194 /// NR_102266 /// XM_005246681 /// XM_005246682 /// XM_005246683 /// XM_005246684 /// XM_005246685 /// XM_005246686 /// XM_005246687 /// XM_005246688 /// XM_006712637 /// XM_006712638 /// XM_006712639 </td> <td> 0000266 // mitochondrial fission // inferred from sequence or structural similarity /// 0001836 // release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0006626 // protein targeting to mitochondrion // inferred from mutant phenotype /// 0008053 // mitochondrial fusion // inferred from mutant phenotype /// 0010821 // regulation of mitochondrion organization // inferred from mutant phenotype /// 0016559 // peroxisome fission // inferred from mutant phenotype /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from mutant phenotype /// 0051260 // protein homooligomerization // inferred from direct assay /// 0070584 // mitochondrion morphogenesis // inferred from mutant phenotype /// 0090141 // positive regulation of mitochondrial fission // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0090314 // positive regulation of protein targeting to membrane // inferred from direct assay /// 1900063 // regulation of peroxisome organization // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005777 // peroxisome // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032592 // integral component of mitochondrial membrane // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> 45.35 </td> <td> 56.80 </td> <td> 5.15 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218088_s_at </td> <td> 218088_s_at </td> <td> NM_022157 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022157.1 /DEF=Homo sapiens Rag C protein (GTR2), mRNA. /FEA=mRNA /GEN=GTR2 /PROD=Rag C protein /DB_XREF=gi:11995471 /UG=Hs.110950 Rag C protein /FL=gb:AF272035.1 gb:NM_022157.1 gb:AF323609.1 </td> <td> NM_022157 </td> <td> Ras-related GTP binding C </td> <td> RRAGC </td> <td> 64121 </td> <td> NM_001271851 /// NM_022157 </td> <td> 0006184 // GTP catabolic process // inferred from direct assay /// 0006351 // transcription, DNA-templated // non-traceable author statement /// 0006915 // apoptotic process // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008380 // RNA splicing // non-traceable author statement /// 0016049 // cell growth // non-traceable author statement /// 0034613 // cellular protein localization // inferred from sequence or structural similarity /// 0071230 // cellular response to amino acid stimulus // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // non-traceable author statement /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0019003 // GDP binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> -160.93 </td> <td> 353.69 </td> <td> -5.15 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202568_s_at </td> <td> 202568_s_at </td> <td> AI745639 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI745639 /FEA=EST /DB_XREF=gi:5113927 /DB_XREF=est:tr24b01.x1 /CLONE=IMAGE:2219209 /UG=Hs.172766 MAPmicrotubule affinity-regulating kinase 3 /FL=gb:M80359.1 gb:NM_002376.1 </td> <td> AI745639 </td> <td> MAP/microtubule affinity-regulating kinase 3 </td> <td> MARK3 </td> <td> 4140 </td> <td> NM_001128918 /// NM_001128919 /// NM_001128920 /// NM_001128921 /// NM_002376 /// XM_005267641 /// XM_005267642 /// XM_005267643 /// XM_006720146 /// XM_006720147 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -52.08 </td> <td> 116.19 </td> <td> -5.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218023_s_at </td> <td> 218023_s_at </td> <td> NM_016605 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016605.1 /DEF=Homo sapiens putative nuclear protein (LOC51307), mRNA. /FEA=mRNA /GEN=LOC51307 /PROD=putative nuclear protein /DB_XREF=gi:7706138 /UG=Hs.102469 putative nuclear protein /FL=gb:AF251040.1 gb:NM_016605.1 </td> <td> NM_016605 </td> <td> family with sequence similarity 53, member C </td> <td> FAM53C </td> <td> 51307 </td> <td> NM_001135647 /// NM_016605 </td> <td>  </td> <td>  </td> <td>  </td> <td> 77.35 </td> <td> 235.82 </td> <td> 5.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218653_at </td> <td> 218653_at </td> <td> NM_014252 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014252.1 /DEF=Homo sapiens solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 (SLC25A15), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=SLC25A15 /PROD=ornithine transporter 1(hyperornithinemia-hyperammonemia-homocitrullinuria) /DB_XREF=gi:7657584 /UG=Hs.78457 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 /FL=gb:BC002702.1 gb:AF112968.1 gb:NM_014252.1 </td> <td> NM_014252 </td> <td> solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 </td> <td> SLC25A15 </td> <td> 10166 </td> <td> NM_014252 </td> <td> 0000050 // urea cycle // traceable author statement /// 0000066 // mitochondrial ornithine transport // traceable author statement /// 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000064 // L-ornithine transmembrane transporter activity // traceable author statement </td> <td> 56.62 </td> <td> 97.26 </td> <td> 5.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208919_s_at </td> <td> 208919_s_at </td> <td> BC001709 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001709.1 /DEF=Homo sapiens, Similar to hypothetical protein FLJ13052, clone MGC:1900, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to hypothetical protein FLJ13052 /DB_XREF=gi:12804578 /UG=Hs.220324 hypothetical protein FLJ13052 /FL=gb:BC001709.1 </td> <td> BC001709 </td> <td> NAD kinase </td> <td> NADK </td> <td> 65220 </td> <td> NM_001198993 /// NM_001198994 /// NM_001198995 /// NM_023018 /// XM_005244778 /// XM_006710837 /// XM_006710838 /// XM_006710839 /// XR_241040 </td> <td> 0006741 // NADP biosynthetic process // inferred from electronic annotation /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // non-traceable author statement /// 0019674 // NAD metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // non-traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003951 // NAD+ kinase activity // inferred from direct assay /// 0003951 // NAD+ kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 109.25 </td> <td> 178.20 </td> <td> 5.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 210101_x_at </td> <td> 210101_x_at </td> <td> AF257318 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF257318.1 /DEF=Homo sapiens SH3-containing protein SH3GLB1 mRNA, complete cds. /FEA=mRNA /PROD=SH3-containing protein SH3GLB1 /DB_XREF=gi:8896091 /UG=Hs.136309 SH3-containing protein SH3GLB1 /FL=gb:AF350371.1 gb:AF151819.1 gb:NM_016009.1 gb:AF257318.1 </td> <td> AF257318 </td> <td> SH3-domain GRB2-like endophilin B1 </td> <td> SH3GLB1 </td> <td> 51100 </td> <td> NM_001206651 /// NM_001206652 /// NM_001206653 /// NM_016009 /// XM_006710672 /// XM_006710673 </td> <td> 0006654 // phosphatidic acid biosynthetic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0051084 // 'de novo' posttranslational protein folding // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from direct assay /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005504 // fatty acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0042171 // lysophosphatidic acid acyltransferase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> -268.33 </td> <td> 798.61 </td> <td> -5.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218582_at </td> <td> 218582_at </td> <td> NM_017824 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017824.1 /DEF=Homo sapiens hypothetical protein FLJ20445 (FLJ20445), mRNA. /FEA=mRNA /GEN=FLJ20445 /PROD=hypothetical protein FLJ20445 /DB_XREF=gi:8923414 /UG=Hs.10340 hypothetical protein FLJ20445 /FL=gb:NM_017824.1 </td> <td> NM_017824 </td> <td> membrane-associated ring finger (C3HC4) 5 </td> <td> MARCH5 </td> <td> 54708 </td> <td> NM_017824 /// XM_005269923 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0070585 // protein localization to mitochondrion // inferred from mutant phenotype /// 0090140 // regulation of mitochondrial fission // inferred from mutant phenotype /// 0090141 // positive regulation of mitochondrial fission // inferred from mutant phenotype /// 0090344 // negative regulation of cell aging // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051020 // GTPase binding // inferred from physical interaction </td> <td> -86.37 </td> <td> 196.09 </td> <td> -5.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209147_s_at </td> <td> 209147_s_at </td> <td> AB000888 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB000888.1 /DEF=Homo sapiens mRNA for phosphatidic acid phosphatase 2a, complete cds.  /FEA=mRNA /PROD=phosphatidic acid phosphatase 2a /DB_XREF=gi:2467297 /UG=Hs.41569 phosphatidic acid phosphatase type 2A /FL=gb:AB000888.1 gb:AF017116.1 gb:AF014402.1 gb:NM_003711.1 </td> <td> AB000888 </td> <td> phosphatidic acid phosphatase type 2A </td> <td> PPAP2A </td> <td> 8611 </td> <td> NM_003711 /// NM_176895 /// NR_103485 /// XM_006714724 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0008354 // germ cell migration // traceable author statement /// 0019216 // regulation of lipid metabolic process // non-traceable author statement /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030518 // intracellular steroid hormone receptor signaling pathway // traceable author statement /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046839 // phospholipid dephosphorylation // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0008195 // phosphatidate phosphatase activity // inferred from direct assay /// 0008195 // phosphatidate phosphatase activity // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -51.42 </td> <td> 101.66 </td> <td> -5.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212139_at </td> <td> 212139_at </td> <td> D86973 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D86973.1 /DEF=Human mRNA for KIAA0219 gene, partial cds. /FEA=mRNA /GEN=KIAA0219 /DB_XREF=gi:1504019 /UG=Hs.75354 GCN1 (general control of amino-acid synthesis 1, yeast)-like 1 </td> <td> D86973 </td> <td> GCN1 general control of amino-acid synthesis 1-like 1 (yeast) </td> <td> GCN1L1 </td> <td> 10985 </td> <td> NM_006836 </td> <td> 0006412 // translation // non-traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 60.70 </td> <td> 145.40 </td> <td> 5.13 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 210574_s_at </td> <td> 210574_s_at </td> <td> AF241788 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF241788.1 /DEF=Homo sapiens NPD011 (NPD011) mRNA, complete cds. /FEA=mRNA /GEN=NPD011 /PROD=NPD011 /DB_XREF=gi:12005492 /UG=Hs.263812 nuclear distribution gene C (A.nidulans) homolog /FL=gb:AF241788.1 </td> <td> AF241788 </td> <td> nudC nuclear distribution protein </td> <td> NUDC </td> <td> 10726 </td> <td> NM_006600 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 60.80 </td> <td> 262.02 </td> <td> 5.13 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 205816_at </td> <td> 205816_at </td> <td> NM_002214 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002214.1 /DEF=Homo sapiens integrin, beta 8 (ITGB8), mRNA. /FEA=mRNA /GEN=ITGB8 /PROD=integrin, beta 8 /DB_XREF=gi:4504778 /UG=Hs.52620 integrin, beta 8 /FL=gb:M73780.1 gb:NM_002214.1 </td> <td> NM_002214 </td> <td> integrin, beta 8 </td> <td> ITGB8 </td> <td> 3696 </td> <td> NM_002214 /// XM_005249751 /// XM_005249752 </td> <td> 0001573 // ganglioside metabolic process // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0060674 // placenta blood vessel development // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation </td> <td> -43.40 </td> <td> 30.25 </td> <td> -5.13 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 213140_s_at </td> <td> 213140_s_at </td> <td> AB014593 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB014593.1 /DEF=Homo sapiens mRNA for KIAA0693 protein, partial cds. /FEA=mRNA /GEN=KIAA0693 /PROD=KIAA0693 protein /DB_XREF=gi:3327199 /UG=Hs.154429 KIAA0693 protein </td> <td> AB014593 </td> <td> synovial sarcoma translocation gene on chromosome 18-like 1 </td> <td> SS18L1 </td> <td> 26039 </td> <td> NM_015558 /// NM_198935 /// XM_005260389 /// XM_005260391 /// XM_006723771 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0050773 // regulation of dendrite development // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000780 // condensed nuclear chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005694 // chromosome // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 45.95 </td> <td> 37.45 </td> <td> 5.13 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212183_at </td> <td> 212183_at </td> <td> AW511135 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW511135 /FEA=EST /DB_XREF=gi:7149213 /DB_XREF=est:hd43g08.x1 /CLONE=IMAGE:2912318 /UG=Hs.92381 nudix (nucleoside diphosphate linked moiety X)-type motif 4 </td> <td> AW511135 </td> <td> nudix (nucleoside diphosphate linked moiety X)-type motif 4 /// nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1 </td> <td> NUDT4 /// NUDT4P1 </td> <td> 11163 /// 440672 </td> <td> NM_019094 /// NM_199040 /// NR_002212 /// XM_005268595 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0009187 // cyclic nucleotide metabolic process // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0019935 // cyclic-nucleotide-mediated signaling // traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046831 // regulation of RNA export from nucleus // traceable author statement /// 0046907 // intracellular transport // traceable author statement </td> <td> 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030515 // snoRNA binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050072 // m7G(5')pppN diphosphatase activity // inferred from sequence or structural similarity /// 0052840 // inositol diphosphate tetrakisphosphate diphosphatase activity // traceable author statement /// 0052841 // inositol bisdiphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052842 // inositol diphosphate pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052843 // inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052844 // inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052845 // inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052846 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity // inferred from electronic annotation /// 0052847 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation /// 0052848 // inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation </td> <td> 78.60 </td> <td> 135.68 </td> <td> 5.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 210825_s_at </td> <td> 210825_s_at </td> <td> AF130103 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF130103.1 /DEF=Homo sapiens clone FLB2914 PRO0720 mRNA, complete cds. /FEA=mRNA /PROD=PRO0720 /DB_XREF=gi:11493509 /UG=Hs.160483 erythrocyte membrane protein band 7.2 (stomatin) /FL=gb:AF130103.1 </td> <td> AF130103 </td> <td> phosphatidylethanolamine binding protein 1 </td> <td> PEBP1 </td> <td> 5037 </td> <td> NM_002567 </td> <td> 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0008429 // phosphatidylethanolamine binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 197.07 </td> <td> 512.51 </td> <td> 5.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218734_at </td> <td> 218734_at </td> <td> NM_024771 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024771.1 /DEF=Homo sapiens hypothetical protein FLJ13848 (FLJ13848), mRNA. /FEA=mRNA /GEN=FLJ13848 /PROD=hypothetical protein FLJ13848 /DB_XREF=gi:13376118 /UG=Hs.136976 hypothetical protein FLJ13848 /FL=gb:NM_024771.1 </td> <td> NM_024771 </td> <td> N(alpha)-acetyltransferase 40, NatD catalytic subunit </td> <td> NAA40 </td> <td> 79829 </td> <td> NM_024771 /// XM_005274295 /// XM_005274296 /// XM_006718689 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation </td> <td>  </td> <td> 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation </td> <td> 47.23 </td> <td> 77.66 </td> <td> 5.11 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203819_s_at </td> <td> 203819_s_at </td> <td> AU160004 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU160004 /FEA=EST /DB_XREF=gi:11021525 /DB_XREF=est:AU160004 /CLONE=Y79AA1000871 /UG=Hs.79440 IGF-II mRNA-binding protein 3 /FL=gb:U97188.1 gb:U76705.1 gb:AF117108.1 gb:NM_006547.1 </td> <td> AU160004 </td> <td> insulin-like growth factor 2 mRNA binding protein 3 </td> <td> IGF2BP3 </td> <td> 10643 </td> <td> NM_006547 /// XM_006715638 /// XM_006715639 </td> <td> 0006412 // translation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0042035 // regulation of cytokine biosynthetic process // inferred by curator /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0045182 // translation regulator activity // inferred from sequence or structural similarity /// 0048027 // mRNA 5'-UTR binding // inferred from direct assay </td> <td> 189.33 </td> <td> 405.84 </td> <td> 5.11 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209608_s_at </td> <td> 209608_s_at </td> <td> BC000408 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000408.1 /DEF=Homo sapiens, acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase), clone MGC:8573, mRNA, complete cds.  /FEA=mRNA /PROD=acetyl-Coenzyme A acetyltransferase 2(acetoacetyl Coenzyme A thiolase) /DB_XREF=gi:12653278 /UG=Hs.278544 acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase) /FL=gb:BC000408.1 </td> <td> BC000408 </td> <td> acetyl-CoA acetyltransferase 2 </td> <td> ACAT2 </td> <td> 39 </td> <td> NM_005891 /// XM_005266980 </td> <td> 0006629 // lipid metabolic process // inferred by curator /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0003985 // acetyl-CoA C-acetyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation </td> <td> 66.18 </td> <td> 138.41 </td> <td> 5.11 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200757_s_at </td> <td> 200757_s_at </td> <td> NM_001219 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001219.2 /DEF=Homo sapiens calumenin (CALU), mRNA. /FEA=mRNA /GEN=CALU /PROD=calumenin precursor /DB_XREF=gi:6005991 /UG=Hs.7753 calumenin /FL=gb:U67280.1 gb:AF013759.1 gb:NM_001219.2 </td> <td> NM_001219 </td> <td> calumenin </td> <td> CALU </td> <td> 813 </td> <td> NM_001130674 /// NM_001199671 /// NM_001199672 /// NM_001199673 /// NM_001199674 /// NM_001219 /// NR_074086 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0033018 // sarcoplasmic reticulum lumen // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 233.28 </td> <td> 737.99 </td> <td> 5.11 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 204658_at </td> <td> 204658_at </td> <td> NM_013293 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013293.1 /DEF=Homo sapiens transformer-2 alpha (htra-2 alpha) (HSU53209), mRNA. /FEA=mRNA /GEN=HSU53209 /PROD=transformer-2 alpha (htra-2 alpha) /DB_XREF=gi:9558732 /UG=Hs.24937 transformer-2 alpha (htra-2 alpha) /FL=gb:U53209.1 gb:NM_013293.1 </td> <td> NM_013293 </td> <td> transformer 2 alpha homolog (Drosophila) </td> <td> TRA2A </td> <td> 29896 </td> <td> NM_001282757 /// NM_001282758 /// NM_001282759 /// NM_013293 /// XM_005249725 /// XM_006715713 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 49.07 </td> <td> 232.94 </td> <td> 5.11 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200744_s_at </td> <td> 200744_s_at </td> <td> AI741124 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI741124 /FEA=EST /DB_XREF=gi:5109412 /DB_XREF=est:wg19c04.x1 /CLONE=IMAGE:2365542 /UG=Hs.215595 guanine nucleotide binding protein (G protein), beta polypeptide 1 /FL=gb:NM_002074.1 gb:BC004186.1 </td> <td> AI741124 </td> <td> guanine nucleotide binding protein (G protein), beta polypeptide 1 </td> <td> GNB1 </td> <td> 2782 </td> <td> NM_001282538 /// NM_001282539 /// NM_002074 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050909 // sensory perception of taste // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity </td> <td> 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005834 // heterotrimeric G-protein complex // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0042622 // photoreceptor outer segment membrane // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097381 // photoreceptor disc membrane // traceable author statement </td> <td> 0003924 // GTPase activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from direct assay /// 0051020 // GTPase binding // inferred from physical interaction </td> <td> -275.28 </td> <td> 591.96 </td> <td> -5.10 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202688_at </td> <td> 202688_at </td> <td> NM_003810 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003810.1 /DEF=Homo sapiens tumor necrosis factor (ligand) superfamily, member 10 (TNFSF10), mRNA.  /FEA=mRNA /GEN=TNFSF10 /PROD=tumor necrosis factor (ligand) superfamily,member 10 /DB_XREF=gi:4507592 /UG=Hs.83429 tumor necrosis factor (ligand) superfamily, member 10 /FL=gb:U37518.1 gb:U57059.1 gb:NM_003810.1 </td> <td> NM_003810 </td> <td> tumor necrosis factor (ligand) superfamily, member 10 </td> <td> TNFSF10 </td> <td> 8743 </td> <td> NM_001190942 /// NM_001190943 /// NM_003810 /// NR_033994 </td> <td> 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0097190 // apoptotic signaling pathway // traceable author statement /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from direct assay /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032813 // tumor necrosis factor receptor superfamily binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -136.48 </td> <td> 121.69 </td> <td> -5.09 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202627_s_at </td> <td> 202627_s_at </td> <td> AL574210 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL574210 /FEA=EST /DB_XREF=gi:12934198 /DB_XREF=est:AL574210 /CLONE=CS0DI039YB02 (3 prime) /UG=Hs.82085 serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 /FL=gb:NM_000602.1 gb:M16006.1 </td> <td> AL574210 </td> <td> serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 </td> <td> SERPINE1 </td> <td> 5054 </td> <td> NM_000602 /// NM_001165413 </td> <td> 0001300 // chronological cell aging // inferred from expression pattern /// 0001525 // angiogenesis // inferred from expression pattern /// 0002576 // platelet degranulation // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010469 // regulation of receptor activity // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from mutant phenotype /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from mutant phenotype /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030198 // extracellular matrix organization // traceable author statement /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from mutant phenotype /// 0033629 // negative regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0035491 // positive regulation of leukotriene production involved in inflammatory response // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042730 // fibrinolysis // traceable author statement /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0050729 // positive regulation of inflammatory response // inferred from genetic interaction /// 0050829 // defense response to Gram-negative bacterium // inferred from genetic interaction /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay /// 0061044 // negative regulation of vascular wound healing // inferred from genetic interaction /// 0061045 // negative regulation of wound healing // inferred by curator /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 0090026 // positive regulation of monocyte chemotaxis // inferred from mutant phenotype /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 2000098 // negative regulation of smooth muscle cell-matrix adhesion // inferred from direct assay /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> -1012.73 </td> <td> 3560.59 </td> <td> -5.09 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202572_s_at </td> <td> 202572_s_at </td> <td> NM_014902 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014902.1 /DEF=Homo sapiens KIAA0964 protein (KIAA0964), mRNA. /FEA=mRNA /GEN=KIAA0964 /PROD=KIAA0964 protein /DB_XREF=gi:7662411 /UG=Hs.177425 KIAA0964 protein /FL=gb:AB023181.1 gb:NM_014902.1 </td> <td> NM_014902 </td> <td> discs, large (Drosophila) homolog-associated protein 4 </td> <td> DLGAP4 </td> <td> 22839 </td> <td> NM_001042486 /// NM_014902 /// NM_183006 /// XM_005260329 /// XM_005260331 /// XM_005260332 /// XM_005260333 /// XR_430296 </td> <td> 0007267 // cell-cell signaling // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 53.30 </td> <td> 113.12 </td> <td> 5.09 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200875_s_at </td> <td> 200875_s_at </td> <td> NM_006392 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006392.1 /DEF=Homo sapiens nucleolar protein (KKED repeat) (NOP56), mRNA. /FEA=mRNA /GEN=NOP56 /PROD=nucleolar protein (KKED repeat) /DB_XREF=gi:5453793 /UG=Hs.296585 nucleolar protein (KKED repeat) /FL=gb:NM_006392.1 </td> <td> NM_006392 </td> <td> microRNA 1292 /// NOP56 ribonucleoprotein /// small nucleolar RNA, C/D box 110 /// small nucleolar RNA, C/D box 57 /// small nucleolar RNA, C/D box 86 </td> <td> MIR1292 /// NOP56 /// SNORD110 /// SNORD57 /// SNORD86 </td> <td> 10528 /// 26792 /// 692201 /// 692213 /// 100302138 </td> <td> NM_006392 /// NR_002738 /// NR_003078 /// NR_004399 /// NR_027700 /// NR_031699 </td> <td> 0006364 // rRNA processing // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005732 // small nucleolar ribonucleoprotein complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031428 // box C/D snoRNP complex // non-traceable author statement /// 0070761 // pre-snoRNP complex // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030515 // snoRNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 91.35 </td> <td> 253.22 </td> <td> 5.09 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208868_s_at </td> <td> 208868_s_at </td> <td> BF125756 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF125756 /FEA=EST /DB_XREF=gi:10964796 /DB_XREF=est:601763146F1 /CLONE=IMAGE:4026010 /UG=Hs.282654 Homo sapiens mRNA; cDNA DKFZp564N1272 (from clone DKFZp564N1272); complete cds /FL=gb:AL136676.1 gb:AF087847.1 </td> <td> BF125756 </td> <td> GABA(A) receptor-associated protein like 1 </td> <td> GABARAPL1 </td> <td> 23710 </td> <td> NM_031412 /// XM_005253344 </td> <td> 0000045 // autophagic vacuole assembly // not recorded /// 0000422 // mitochondrion degradation // not recorded /// 0006914 // autophagy // inferred from electronic annotation /// 0012501 // programmed cell death // not recorded /// 0032258 // CVT pathway // not recorded /// 0034727 // piecemeal microautophagy of nucleus // not recorded /// 0044805 // late nucleophagy // not recorded /// 0071211 // protein targeting to vacuole involved in autophagy // not recorded </td> <td> 0000407 // pre-autophagosomal structure // not recorded /// 0000421 // autophagic vacuole membrane // not recorded /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032590 // dendrite membrane // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // not recorded /// 0008429 // phosphatidylethanolamine binding // not recorded /// 0048487 // beta-tubulin binding // inferred from sequence or structural similarity /// 0050811 // GABA receptor binding // not recorded /// 0050811 // GABA receptor binding // inferred from sequence or structural similarity </td> <td> -46.20 </td> <td> 63.20 </td> <td> -5.09 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 213278_at </td> <td> 213278_at </td> <td> AW014788 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW014788 /FEA=EST /DB_XREF=gi:5863545 /DB_XREF=est:UI-H-BI0-aae-h-10-0-UI.s1 /CLONE=IMAGE:2709354 /UG=Hs.48802 Homo sapiens clone 23632 mRNA sequence </td> <td> AW014788 </td> <td> myotubularin related protein 9 </td> <td> MTMR9 </td> <td> 66036 </td> <td> NM_015458 /// XM_005272396 </td> <td> 0016311 // dephosphorylation // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation </td> <td> 45.33 </td> <td> 71.99 </td> <td> 5.09 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 201687_s_at </td> <td> 201687_s_at </td> <td> NM_006595 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006595.1 /DEF=Homo sapiens API5-like 1 (API5L1), mRNA. /FEA=mRNA /GEN=API5L1 /PROD=API5-like 1 /DB_XREF=gi:5729729 /UG=Hs.227913 API5-like 1 /FL=gb:AF229254.1 gb:NM_006595.1 </td> <td> NM_006595 </td> <td> apoptosis inhibitor 5 </td> <td> API5 </td> <td> 8539 </td> <td> NM_001142930 /// NM_001142931 /// NM_001243747 /// NM_006595 /// NR_024625 /// XM_006718359 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 2000270 // negative regulation of fibroblast apoptotic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 55.78 </td> <td> 168.19 </td> <td> 5.08 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218175_at </td> <td> 218175_at </td> <td> NM_025140 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025140.1 /DEF=Homo sapiens hypothetical protein FLJ22471 (FLJ22471), mRNA. /FEA=mRNA /GEN=FLJ22471 /PROD=hypothetical protein FLJ22471 /DB_XREF=gi:13376724 /UG=Hs.288909 hypothetical protein FLJ22471 /FL=gb:NM_025140.1 </td> <td> NM_025140 </td> <td> coiled-coil domain containing 92 </td> <td> CCDC92 </td> <td> 80212 </td> <td> NM_025140 /// XM_005253624 /// XM_005253625 /// XM_006719611 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005814 // centriole // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -63.30 </td> <td> 312.98 </td> <td> -5.08 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209920_at </td> <td> 209920_at </td> <td> U20165 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U20165.1 /DEF=Human type II serinethreonine kinase receptor mRNA, complete cds. /FEA=mRNA /PROD=type II serinethreonine kinase receptor /DB_XREF=gi:704361 /UG=Hs.53250 bone morphogenetic protein receptor, type II (serinethreonine kinase) /FL=gb:NM_001204.2 gb:U20165.1 gb:D50516.1 </td> <td> U20165 </td> <td> bone morphogenetic protein receptor, type II (serine/threonine kinase) </td> <td> BMPR2 </td> <td> 659 </td> <td> NM_001204 /// NM_033346 </td> <td> 0001707 // mesoderm formation // inferred from sequence or structural similarity /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001946 // lymphangiogenesis // inferred from sequence or structural similarity /// 0001974 // blood vessel remodeling // inferred from sequence or structural similarity /// 0002063 // chondrocyte development // inferred from mutant phenotype /// 0003085 // negative regulation of systemic arterial blood pressure // inferred from mutant phenotype /// 0006366 // transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from direct assay /// 0007420 // brain development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from expression pattern /// 0009952 // anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010634 // positive regulation of epithelial cell migration // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0014916 // regulation of lung blood pressure // inferred from mutant phenotype /// 0014916 // regulation of lung blood pressure // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from sequence or structural similarity /// 0030509 // BMP signaling pathway // traceable author statement /// 0030513 // positive regulation of BMP signaling pathway // inferred from mutant phenotype /// 0032924 // activin receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045906 // negative regulation of vasoconstriction // inferred from sequence or structural similarity /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0048286 // lung alveolus development // inferred from sequence or structural similarity /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0060836 // lymphatic endothelial cell differentiation // inferred from sequence or structural similarity /// 0060840 // artery development // inferred from sequence or structural similarity /// 0060841 // venous blood vessel development // inferred from sequence or structural similarity /// 0061298 // retina vasculature development in camera-type eye // inferred from sequence or structural similarity /// 1902731 // negative regulation of chondrocyte proliferation // inferred from mutant phenotype /// 2000279 // negative regulation of DNA biosynthetic process // inferred from mutant phenotype </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005901 // caveola // inferred from mutant phenotype /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044214 // fully spanning plasma membrane // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016362 // activin receptor activity, type II // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -87.75 </td> <td> 101.85 </td> <td> -5.08 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203058_s_at </td> <td> 203058_s_at </td> <td> AW299958 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW299958 /FEA=EST /DB_XREF=gi:6709635 /DB_XREF=est:xs44g05.x1 /CLONE=IMAGE:2772536 /UG=Hs.274230 3-phosphoadenosine 5-phosphosulfate synthase 2 /FL=gb:AF150754.2 gb:AF313907.1 gb:AF091242.1 gb:NM_004670.1 gb:AF074331.1 gb:AF173365.1 </td> <td> AW299958 </td> <td> 3'-phosphoadenosine 5'-phosphosulfate synthase 2 </td> <td> PAPSS2 </td> <td> 9060 </td> <td> NM_001015880 /// NM_004670 </td> <td> 0000103 // sulfate assimilation // inferred from electronic annotation /// 0001501 // skeletal system development // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement /// 0050428 // 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process // traceable author statement /// 0060348 // bone development // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004020 // adenylylsulfate kinase activity // inferred from electronic annotation /// 0004781 // sulfate adenylyltransferase (ATP) activity // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from sequence or structural similarity </td> <td> -59.75 </td> <td> 232.50 </td> <td> -5.07 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 202033_s_at </td> <td> 202033_s_at </td> <td> BG402105 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG402105 /FEA=EST /DB_XREF=gi:13295553 /DB_XREF=est:602465641F1 /CLONE=IMAGE:4593682 /UG=Hs.50421 KIAA0203 gene product /FL=gb:D86958.1 gb:NM_014781.1 </td> <td> BG402105 </td> <td> RB1-inducible coiled-coil 1 </td> <td> RB1CC1 </td> <td> 9821 </td> <td> NM_001083617 /// NM_014781 /// XM_006716491 /// XM_006716492 /// XM_006716493 </td> <td> 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0010506 // regulation of autophagy // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045793 // positive regulation of cell size // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000407 // pre-autophagosomal structure // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0034045 // pre-autophagosomal structure membrane // inferred from sequence or structural similarity /// 0070969 // ULK1-ATG13-FIP200 complex // inferred from physical interaction </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation </td> <td> -107.20 </td> <td> 201.05 </td> <td> -5.07 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218530_at </td> <td> 218530_at </td> <td> NM_013241 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013241.1 /DEF=Homo sapiens FH1FH2 domain-containing protein (FHOS), mRNA. /FEA=mRNA /GEN=FHOS /PROD=FH1FH2 domain-containing protein /DB_XREF=gi:7019374 /UG=Hs.95231 FH1FH2 domain-containing protein /FL=gb:AF113615.1 gb:NM_013241.1 </td> <td> NM_013241 </td> <td> formin homology 2 domain containing 1 </td> <td> FHOD1 </td> <td> 29109 </td> <td> NM_013241 /// XM_005255909 /// XM_005255910 /// XM_006721180 </td> <td> 0007015 // actin filament organization // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0032059 // bleb // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 98.45 </td> <td> 155.60 </td> <td> 5.07 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203974_at </td> <td> 203974_at </td> <td> NM_012080 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012080.1 /DEF=Homo sapiens DNA segment, numerous copies, expressed probes (GS1 gene) (DXF68S1E), mRNA.  /FEA=mRNA /GEN=DXF68S1E /PROD=DNA segment, numerous copies, expressed probes(GS1 gene) /DB_XREF=gi:6912345 /UG=Hs.78991 DNA segment, numerous copies, expressed probes (GS1 gene) /FL=gb:M86934.1 gb:NM_012080.1 </td> <td> NM_012080 </td> <td> haloacid dehalogenase-like hydrolase domain containing 1 </td> <td> HDHD1 </td> <td> 8226 </td> <td> NM_001135565 /// NM_001178135 /// NM_001178136 /// NM_012080 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation </td> <td> 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 67.75 </td> <td> 245.60 </td> <td> 5.06 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 213315_x_at </td> <td> 213315_x_at </td> <td> L43577 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:L43577 /FEA=EST /DB_XREF=gi:899066 /DB_XREF=est:L43577 /CLONE=EST500 /UG=Hs.82171 Homo sapiens (clone 115392) mRNA </td> <td> L43577 </td> <td> chromosome X open reading frame 40A </td> <td> CXorf40A </td> <td> 91966 </td> <td> NM_001171907 /// NM_001171908 /// NM_001171909 /// NM_178124 /// XM_005262348 /// XM_005262349 /// XM_005262350 /// XM_005278212 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 50.80 </td> <td> 146.70 </td> <td> 5.06 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208614_s_at </td> <td> 208614_s_at </td> <td> M62994 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M62994.1 /DEF=Homo sapiens thyroid autoantigen (truncated actin-binding protein) mRNA, complete cds.  /FEA=mRNA /PROD=thyroid autoantigen /DB_XREF=gi:349450 /UG=Hs.81008 filamin B, beta (actin-binding protein-278) /FL=gb:AF043045.1 gb:AF042166.1 gb:M62994.1 gb:NM_001457.1 </td> <td> M62994 </td> <td> filamin B, beta </td> <td> FLNB </td> <td> 2317 </td> <td> NM_001164317 /// NM_001164318 /// NM_001164319 /// NM_001457 /// XM_005264977 /// XM_005264978 /// XM_005264981 /// XM_005264982 /// XM_006713067 </td> <td> 0007016 // cytoskeletal anchoring at plasma membrane // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016021 // integral component of membrane // non-traceable author statement /// 0030018 // Z disc // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 280.88 </td> <td> 884.44 </td> <td> 5.06 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200810_s_at </td> <td> 200810_s_at </td> <td> NM_001280 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001280.1 /DEF=Homo sapiens cold inducible RNA-binding protein (CIRBP), mRNA. /FEA=mRNA /GEN=CIRBP /PROD=cold inducible RNA-binding protein /DB_XREF=gi:4502846 /UG=Hs.119475 cold inducible RNA-binding protein /FL=gb:D78134.1 gb:BC000403.1 gb:BC000901.1 gb:AF021336.1 gb:NM_001280.1 </td> <td> NM_001280 </td> <td> cold inducible RNA binding protein </td> <td> CIRBP </td> <td> 1153 </td> <td> NM_001280 /// NR_023312 /// NR_023313 /// XM_006722636 /// XM_006722637 /// XM_006722638 /// XR_430127 /// XR_430128 </td> <td> 0006950 // response to stress // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0009411 // response to UV // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0034063 // stress granule assembly // inferred from sequence or structural similarity /// 0045727 // positive regulation of translation // inferred from direct assay /// 0048255 // mRNA stabilization // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0030371 // translation repressor activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070181 // small ribosomal subunit rRNA binding // inferred from direct assay </td> <td> 115.87 </td> <td> 290.56 </td> <td> 5.06 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218809_at </td> <td> 218809_at </td> <td> NM_024960 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024960.1 /DEF=Homo sapiens hypothetical protein FLJ11729 (FLJ11729), mRNA. /FEA=mRNA /GEN=FLJ11729 /PROD=hypothetical protein FLJ11729 /DB_XREF=gi:13376450 /UG=Hs.286212 hypothetical protein FLJ11729 /FL=gb:NM_024960.1 </td> <td> NM_024960 </td> <td> pantothenate kinase 2 </td> <td> PANK2 </td> <td> 80025 </td> <td> NM_024960 /// NM_153637 /// NM_153638 /// NM_153639 /// NM_153640 /// NM_153641 /// XM_005260835 /// XM_005260836 /// XM_006723631 </td> <td> 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0009060 // aerobic respiration // inferred from electronic annotation /// 0009108 // coenzyme biosynthetic process // traceable author statement /// 0015937 // coenzyme A biosynthetic process // inferred from electronic annotation /// 0015939 // pantothenate metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051881 // regulation of mitochondrial membrane potential // inferred from electronic annotation /// 0070584 // mitochondrion morphogenesis // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004594 // pantothenate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -60.38 </td> <td> 190.99 </td> <td> -5.05 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203057_s_at </td> <td> 203057_s_at </td> <td> AV724783 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV724783 /FEA=EST /DB_XREF=gi:10829513 /DB_XREF=est:AV724783 /CLONE=HTBCEG11 /UG=Hs.26719 zinc-finger DNA-binding protein /FL=gb:D45132.1 gb:NM_015866.1 </td> <td> AV724783 </td> <td> PR domain containing 2, with ZNF domain </td> <td> PRDM2 </td> <td> 7799 </td> <td> NM_001007257 /// NM_001135610 /// NM_012231 /// NM_015866 /// XM_005245992 /// XM_005245993 /// XM_005245994 /// XM_005245995 /// XM_005245996 /// XM_005245997 /// XM_005245998 /// XM_006710877 /// XM_006710878 /// XM_006710879 /// XM_006710880 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 63.47 </td> <td> 120.74 </td> <td> 5.05 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 216267_s_at </td> <td> 216267_s_at </td> <td> BF034906 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF034906 /FEA=EST /DB_XREF=gi:10742618 /DB_XREF=est:601458947F1 /CLONE=IMAGE:3862474 /UG=Hs.91566 PL6 protein </td> <td> BF034906 </td> <td> transmembrane protein 115 </td> <td> TMEM115 </td> <td> 11070 </td> <td> NM_007024 </td> <td> 0008285 // negative regulation of cell proliferation // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 44.92 </td> <td> 74.11 </td> <td> 5.05 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 217908_s_at </td> <td> 217908_s_at </td> <td> NM_018442 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018442.1 /DEF=Homo sapiens PC326 protein (PC326), mRNA. /FEA=mRNA /GEN=PC326 /PROD=PC326 protein /DB_XREF=gi:8923955 /UG=Hs.279882 PC326 protein /FL=gb:AL136738.1 gb:AF150734.1 gb:NM_018442.1 </td> <td> NM_018442 </td> <td> DDB1 and CUL4 associated factor 6 </td> <td> DCAF6 </td> <td> 55827 </td> <td> NM_001017977 /// NM_001198956 /// NM_001198957 /// NM_018442 /// XM_005245331 /// XM_005245332 /// XM_005245333 </td> <td> 0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction </td> <td> 0005634 // nucleus // inferred from direct assay /// 0080008 // Cul4-RING E3 ubiquitin ligase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay </td> <td> -40.22 </td> <td> 134.71 </td> <td> -5.05 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 219806_s_at </td> <td> 219806_s_at </td> <td> NM_020179 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020179.1 /DEF=Homo sapiens FN5 protein (FN5), mRNA. /FEA=mRNA /GEN=FN5 /PROD=FN5 protein /DB_XREF=gi:9910225 /UG=Hs.259737 FN5 protein /FL=gb:AF197137.1 gb:NM_020179.1 </td> <td> NM_020179 </td> <td> single-pass membrane protein with coiled-coil domains 4 </td> <td> SMCO4 </td> <td> 56935 </td> <td> NM_020179 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 65.95 </td> <td> 75.12 </td> <td> 5.05 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 203504_s_at </td> <td> 203504_s_at </td> <td> NM_005502 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005502.1 /DEF=Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 1 (ABCA1), mRNA.  /FEA=mRNA /GEN=ABCA1 /PROD=ATP-binding cassette, sub-family A member 1 /DB_XREF=gi:5915657 /UG=Hs.211562 ATP-binding cassette, sub-family A (ABC1), member 1 /FL=gb:AF165281.1 gb:NM_005502.1 gb:AF285167.1 </td> <td> NM_005502 </td> <td> ATP-binding cassette, sub-family A (ABC1), member 1 </td> <td> ABCA1 </td> <td> 19 </td> <td> NM_005502 /// XM_005251773 /// XM_005251774 /// XM_005251776 /// XM_005251778 /// XM_005251780 /// XM_006716995 </td> <td> 0002790 // peptide secretion // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006497 // protein lipidation // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0006911 // phagocytosis, engulfment // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from direct assay /// 0010745 // negative regulation of macrophage derived foam cell differentiation // traceable author statement /// 0010875 // positive regulation of cholesterol efflux // inferred from electronic annotation /// 0010887 // negative regulation of cholesterol storage // traceable author statement /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from direct assay /// 0030301 // cholesterol transport // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from mutant phenotype /// 0032367 // intracellular cholesterol transport // inferred from mutant phenotype /// 0032489 // regulation of Cdc42 protein signal transduction // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from direct assay /// 0033344 // cholesterol efflux // inferred from mutant phenotype /// 0033700 // phospholipid efflux // inferred from direct assay /// 0033700 // phospholipid efflux // inferred from mutant phenotype /// 0034380 // high-density lipoprotein particle assembly // inferred from mutant phenotype /// 0034616 // response to laminar fluid shear stress // inferred from expression pattern /// 0038027 // apolipoprotein A-I-mediated signaling pathway // inferred from direct assay /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042158 // lipoprotein biosynthetic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0043691 // reverse cholesterol transport // inferred from mutant phenotype /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045332 // phospholipid translocation // inferred from electronic annotation /// 0050702 // interleukin-1 beta secretion // inferred from mutant phenotype /// 0055091 // phospholipid homeostasis // inferred from mutant phenotype /// 0055098 // response to low-density lipoprotein particle // inferred from expression pattern /// 0060155 // platelet dense granule organization // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005543 // phospholipid binding // inferred by curator /// 0005548 // phospholipid transporter activity // inferred from direct assay /// 0008509 // anion transmembrane transporter activity // inferred from sequence or structural similarity /// 0015485 // cholesterol binding // inferred by curator /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from direct assay /// 0019905 // syntaxin binding // inferred from physical interaction /// 0031267 // small GTPase binding // inferred from physical interaction /// 0034185 // apolipoprotein binding // inferred from physical interaction /// 0034186 // apolipoprotein A-I binding // inferred from physical interaction /// 0034188 // apolipoprotein A-I receptor activity // inferred from direct assay /// 0051117 // ATPase binding // inferred from physical interaction </td> <td> -62.62 </td> <td> 75.96 </td> <td> -5.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218726_at </td> <td> 218726_at </td> <td> NM_018410 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018410.1 /DEF=Homo sapiens hypothetical protein DKFZp762E1312 (DKFZp762E1312), mRNA.  /FEA=mRNA /GEN=DKFZp762E1312 /PROD=hypothetical protein DKFZp762E1312 /DB_XREF=gi:8922180 /UG=Hs.104859 hypothetical protein DKFZp762E1312 /FL=gb:BC001940.1 gb:NM_018410.1 </td> <td> NM_018410 </td> <td> Holliday junction recognition protein </td> <td> HJURP </td> <td> 55355 </td> <td> NM_001282962 /// NM_001282963 /// NM_018410 </td> <td> 0006334 // nucleosome assembly // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0034080 // centromere-specific nucleosome assembly // inferred from mutant phenotype /// 0034080 // centromere-specific nucleosome assembly // traceable author statement /// 0043254 // regulation of protein complex assembly // inferred from direct assay /// 0051101 // regulation of DNA binding // inferred from direct assay </td> <td> 0000775 // chromosome, centromeric region // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0042393 // histone binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -87.32 </td> <td> 191.21 </td> <td> -5.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208780_x_at </td> <td> 208780_x_at </td> <td> AF154847 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF154847.1 /DEF=Homo sapiens 33 kDa Vamp-associated protein (VAMP) mRNA, complete cds.  /FEA=mRNA /GEN=VAMP /PROD=33 kDa Vamp-associated protein /DB_XREF=gi:8099349 /UG=Hs.9006 VAMP (vesicle-associated membrane protein)-associated protein A (33kD) /FL=gb:BC002992.1 gb:AF057358.1 gb:AF044670.1 gb:AF086627.1 gb:NM_003574.1 gb:AF154847.1 </td> <td> AF154847 </td> <td> VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa </td> <td> VAPA </td> <td> 9218 </td> <td> NM_003574 /// NM_194434 </td> <td> 0006665 // sphingolipid metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0008219 // cell death // inferred from mutant phenotype /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0061025 // membrane fusion // traceable author statement /// 0070972 // protein localization to endoplasmic reticulum // inferred from mutant phenotype </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005923 // tight junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> -382.05 </td> <td> 1439.03 </td> <td> -5.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 208942_s_at </td> <td> 208942_s_at </td> <td> BE866511 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE866511 /FEA=EST /DB_XREF=gi:10315287 /DB_XREF=est:601678885F1 /CLONE=IMAGE:3961461 /UG=Hs.8146 translocation protein 1 /FL=gb:D87127.1 gb:U93239.1 gb:NM_003262.1 </td> <td> BE866511 </td> <td> SEC62 homolog (S. cerevisiae) </td> <td> SEC62 </td> <td> 7095 </td> <td> NM_003262 </td> <td> 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006620 // posttranslational protein targeting to membrane // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0004872 // receptor activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation </td> <td> 171.53 </td> <td> 241.59 </td> <td> 5.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 218092_s_at </td> <td> 218092_s_at </td> <td> NM_004504 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004504.2 /DEF=Homo sapiens HIV-1 Rev binding protein (HRB), mRNA. /FEA=mRNA /GEN=HRB /PROD=HIV-1 Rev binding protein /DB_XREF=gi:7262381 /UG=Hs.171545 HIV-1 Rev binding protein /FL=gb:NM_004504.2 </td> <td> NM_004504 </td> <td> ArfGAP with FG repeats 1 </td> <td> AGFG1 </td> <td> 3267 </td> <td> NM_001135187 /// NM_001135188 /// NM_001135189 /// NM_004504 /// XM_005246516 /// XM_006712478 /// XM_006712479 /// XM_006712480 /// XM_006712481 </td> <td> 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -72.50 </td> <td> 209.43 </td> <td> -5.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 36564_at </td> <td> 36564_at </td> <td> W27419 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. W27419:31a10 Homo sapiens cDNA /gb=W27419 /gi=1307241 /ug=Hs.64239 /len=803 </td> <td> W27419 </td> <td> ring finger protein 19B </td> <td> RNF19B </td> <td> 127544 </td> <td> NM_001127361 /// NM_153341 /// XM_005270460 /// XM_006710356 /// XM_006710357 /// XM_006710358 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042267 // natural killer cell mediated cytotoxicity // inferred from electronic annotation /// 0072643 // interferon-gamma secretion // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0044194 // cytolytic granule // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -61.63 </td> <td> 150.11 </td> <td> -5.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 209579_s_at </td> <td> 209579_s_at </td> <td> AL556619 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL556619 /FEA=EST /DB_XREF=gi:12899460 /DB_XREF=est:AL556619 /CLONE=CS0DK006YH06 (5 prime) /UG=Hs.35947 methyl-CpG binding domain protein 4 /FL=gb:AF072250.1 gb:NM_003925.1 gb:AF114784.1 </td> <td> AL556619 </td> <td> methyl-CpG binding domain protein 4 </td> <td> MBD4 </td> <td> 8930 </td> <td> NM_001276270 /// NM_001276271 /// NM_001276272 /// NM_001276273 /// NM_003925 </td> <td> 0000737 // DNA catabolic process, endonucleolytic // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007095 // mitotic G2 DNA damage checkpoint // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0031572 // G2 DNA damage checkpoint // inferred from electronic annotation /// 0045008 // depyrimidination // traceable author statement </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003696 // satellite DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004520 // endodeoxyribonuclease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008263 // pyrimidine-specific mismatch base pair DNA N-glycosylase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 57.40 </td> <td> 105.98 </td> <td> 5.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 219491_at </td> <td> 219491_at </td> <td> NM_024036 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024036.1 /DEF=Homo sapiens hypothetical protein MGC3103 (MGC3103), mRNA. /FEA=mRNA /GEN=MGC3103 /PROD=hypothetical protein MGC3103 /DB_XREF=gi:13128987 /UG=Hs.115960 hypothetical protein MGC3103 /FL=gb:BC000207.1 gb:NM_024036.1 </td> <td> NM_024036 </td> <td> leucine rich repeat and fibronectin type III domain containing 4 </td> <td> LRFN4 </td> <td> 78999 </td> <td> NM_024036 /// XM_005274239 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 39.70 </td> <td> 25.65 </td> <td> 5.03 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 213988_s_at </td> <td> 213988_s_at </td> <td> BE971383 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE971383 /FEA=EST /DB_XREF=gi:10584719 /DB_XREF=est:601651561F1 /CLONE=IMAGE:3934935 /UG=Hs.28491 spermidinespermine N1-acetyltransferase </td> <td> BE971383 </td> <td> spermidine/spermine N1-acetyltransferase 1 </td> <td> SAT1 </td> <td> 6303 </td> <td> NM_002970 /// NR_027783 </td> <td> 0001525 // angiogenesis // inferred from expression pattern /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // traceable author statement /// 0006598 // polyamine catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009447 // putrescine catabolic process // inferred from electronic annotation /// 0032918 // spermidine acetylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004145 // diamine N-acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019809 // spermidine binding // inferred from electronic annotation </td> <td> -399.85 </td> <td> 351.52 </td> <td> -5.03 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 200685_at </td> <td> 200685_at </td> <td> AU146237 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU146237 /FEA=EST /DB_XREF=gi:11007758 /DB_XREF=est:AU146237 /CLONE=HEMBA1007233 /UG=Hs.11482 splicing factor, arginineserine-rich 11 /FL=gb:M74002.1 gb:NM_004768.1 </td> <td> AU146237 </td> <td> serine/arginine-rich splicing factor 11 </td> <td> SRSF11 </td> <td> 9295 </td> <td> NM_001190987 /// NM_004768 /// XM_005271338 /// XM_005271339 /// XM_006711037 /// XM_006711038 /// XM_006711039 /// XM_006711040 /// XM_006711041 /// XR_426640 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 39.60 </td> <td> 30.93 </td> <td> 5.03 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 217861_s_at </td> <td> 217861_s_at </td> <td> NM_013388 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013388.1 /DEF=Homo sapiens prolactin regulatory element binding (PREB), mRNA. /FEA=mRNA /GEN=PREB /PROD=prolactin regulatory element binding /DB_XREF=gi:7019502 /UG=Hs.279784 prolactin regulatory element binding /FL=gb:BC002765.1 gb:AF203687.1 gb:NM_013388.1 gb:AF226684.1 </td> <td> NM_013388 </td> <td> prolactin regulatory element binding </td> <td> PREB </td> <td> 10113 </td> <td> NM_013388 /// XM_006711914 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 51.85 </td> <td> 126.78 </td> <td> 5.03 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 212742_at </td> <td> 212742_at </td> <td> AL530462 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL530462 /FEA=EST /DB_XREF=gi:12793955 /DB_XREF=est:AL530462 /CLONE=CS0DD007YH21 (3 prime) /UG=Hs.16537 hypothetical protein, similar to (U06944) PRAJA1 </td> <td> AL530462 </td> <td> ring finger protein 115 </td> <td> RNF115 </td> <td> 27246 </td> <td> NM_014455 /// XM_005272952 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -69.90 </td> <td> 171.45 </td> <td> -5.03 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.45 </td> </tr>
  <tr> <td> 206332_s_at </td> <td> 206332_s_at </td> <td> NM_005531 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005531.1 /DEF=Homo sapiens interferon, gamma-inducible protein 16 (IFI16), mRNA. /FEA=mRNA /GEN=IFI16 /PROD=interferon, gamma-inducible protein 16 /DB_XREF=gi:5031778 /UG=Hs.155530 interferon, gamma-inducible protein 16 /FL=gb:M63838.1 gb:NM_005531.1 </td> <td> NM_005531 </td> <td> interferon, gamma-inducible protein 16 </td> <td> IFI16 </td> <td> 3428 </td> <td> NM_001206567 /// NM_005531 /// XM_005245127 /// XM_006711290 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001819 // positive regulation of cytokine production // traceable author statement /// 0002218 // activation of innate immune response // inferred from direct assay /// 0002376 // immune system process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0009615 // response to virus // non-traceable author statement /// 0010506 // regulation of autophagy // inferred from expression pattern /// 0030097 // hemopoiesis // non-traceable author statement /// 0030099 // myeloid cell differentiation // non-traceable author statement /// 0030224 // monocyte differentiation // inferred from direct assay /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032731 // positive regulation of interleukin-1 beta production // inferred from direct assay /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from direct assay /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045824 // negative regulation of innate immune response // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from mutant phenotype /// 0071479 // cellular response to ionizing radiation // inferred from direct assay /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from mutant phenotype /// 0097202 // activation of cysteine-type endopeptidase activity // inferred from mutant phenotype /// 2000117 // negative regulation of cysteine-type endopeptidase activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -90.22 </td> <td> 380.71 </td> <td> -5.02 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213123_at </td> <td> 213123_at </td> <td> BE222709 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE222709 /FEA=EST /DB_XREF=gi:8910027 /DB_XREF=est:hu51g06.x1 /CLONE=IMAGE:3173626 /UG=Hs.28785 microfibrillar-associated protein 3 </td> <td> BE222709 </td> <td> microfibrillar-associated protein 3 </td> <td> MFAP3 </td> <td> 4238 </td> <td> NM_001135037 /// NM_001242336 /// NM_005927 </td> <td> 0030198 // extracellular matrix organization // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 54.37 </td> <td> 112.76 </td> <td> 5.02 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217941_s_at </td> <td> 217941_s_at </td> <td> NM_018695 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018695.1 /DEF=Homo sapiens erbb2-interacting protein ERBIN (LOC55914), mRNA. /FEA=mRNA /GEN=LOC55914 /PROD=erbb2-interacting protein ERBIN /DB_XREF=gi:8923908 /UG=Hs.8117 erbb2-interacting protein ERBIN /FL=gb:AF263744.1 gb:NM_018695.1 </td> <td> NM_018695 </td> <td> erbb2 interacting protein </td> <td> ERBB2IP </td> <td> 55914 </td> <td> NM_001006600 /// NM_001253697 /// NM_001253698 /// NM_001253699 /// NM_001253701 /// NM_018695 /// XM_005248554 /// XM_005248555 /// XM_005248556 /// XM_006714660 </td> <td> 0006605 // protein targeting // inferred from electronic annotation /// 0007049 // cell cycle // non-traceable author statement /// 0007155 // cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0016049 // cell growth // non-traceable author statement /// 0045104 // intermediate filament cytoskeleton organization // non-traceable author statement /// 0045175 // basal protein localization // non-traceable author statement /// 0045197 // establishment or maintenance of epithelial cell apical/basal polarity // non-traceable author statement </td> <td> 0005604 // basement membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0005176 // ErbB-2 class receptor binding // traceable author statement /// 0005178 // integrin binding // inferred from physical interaction /// 0005200 // structural constituent of cytoskeleton // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -50.32 </td> <td> 151.51 </td> <td> -5.01 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209907_s_at </td> <td> 209907_s_at </td> <td> AF182198 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF182198.1 /DEF=Homo sapiens intersectin 2 long isoform (ITSN2) mRNA, complete cds. /FEA=mRNA /GEN=ITSN2 /PROD=intersectin 2 long isoform /DB_XREF=gi:7329075 /UG=Hs.166184 intersectin 2 /FL=gb:AF182198.1 </td> <td> AF182198 </td> <td> intersectin 2 </td> <td> ITSN2 </td> <td> 50618 </td> <td> NM_006277 /// NM_019595 /// NM_147152 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -71.43 </td> <td> 168.54 </td> <td> -5.01 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201176_s_at </td> <td> 201176_s_at </td> <td> NM_001655 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001655.2 /DEF=Homo sapiens archain 1 (ARCN1), mRNA. /FEA=mRNA /GEN=ARCN1 /PROD=archain /DB_XREF=gi:11863153 /UG=Hs.33642 archain 1 /FL=gb:NM_001655.2 </td> <td> NM_001655 </td> <td> archain 1 </td> <td> ARCN1 </td> <td> 372 </td> <td> NM_001142281 /// NM_001655 /// XM_005271542 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0021691 // cerebellar Purkinje cell layer maturation // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation /// 0048193 // Golgi vesicle transport // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030137 // COPI-coated vesicle // inferred from electronic annotation /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 121.93 </td> <td> 301.91 </td> <td> 5.01 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202110_at </td> <td> 202110_at </td> <td> NM_001866 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001866.1 /DEF=Homo sapiens cytochrome c oxidase subunit VIIb (COX7B), mRNA. /FEA=mRNA /GEN=COX7B /PROD=cytochrome c oxidase subunit VIIb /DB_XREF=gi:4502990 /UG=Hs.75752 cytochrome c oxidase subunit VIIb /FL=gb:NM_001866.1 </td> <td> NM_001866 </td> <td> cytochrome c oxidase subunit VIIb </td> <td> COX7B </td> <td> 1349 </td> <td> NM_001866 </td> <td> 0007417 // central nervous system development // inferred from mutant phenotype /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005746 // mitochondrial respiratory chain // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation </td> <td> 158.47 </td> <td> 424.39 </td> <td> 5.01 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 218151_x_at </td> <td> 218151_x_at </td> <td> NM_024531 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024531.1 /DEF=Homo sapiens hypothetical protein FLJ11856 (FLJ11856), mRNA. /FEA=mRNA /GEN=FLJ11856 /PROD=hypothetical protein FLJ11856 /DB_XREF=gi:13375681 /UG=Hs.6459 hypothetical protein FLJ11856 /FL=gb:BC002917.1 gb:NM_024531.1 </td> <td> NM_024531 </td> <td> solute carrier family 52 (riboflavin transporter), member 2 </td> <td> SLC52A2 </td> <td> 79581 </td> <td> NM_001253815 /// NM_001253816 /// NM_024531 /// NR_045600 /// XM_006716658 /// XM_006716659 /// XM_006716660 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0032218 // riboflavin transport // inferred from direct assay </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0032217 // riboflavin transporter activity // inferred from direct assay </td> <td> 61.57 </td> <td> 100.31 </td> <td> 5.00 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201281_at </td> <td> 201281_at </td> <td> NM_007002 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007002.1 /DEF=Homo sapiens cell membrane glycoprotein, 110000M(r) (surface antigen) (GP110), mRNA.  /FEA=mRNA /GEN=GP110 /PROD=cell membrane glycoprotein, 110000M(r) (surfaceantigen) /DB_XREF=gi:5901959 /UG=Hs.90107 cell membrane glycoprotein, 110000M(r) (surface antigen) /FL=gb:NM_007002.1 gb:D64154.1 </td> <td> NM_007002 </td> <td> adhesion regulating molecule 1 </td> <td> ADRM1 </td> <td> 11047 </td> <td> NM_001281437 /// NM_001281438 /// NM_007002 /// NM_175573 /// XM_005260257 </td> <td> 0006368 // transcription elongation from RNA polymerase II promoter // inferred from mutant phenotype /// 0010950 // positive regulation of endopeptidase activity // inferred from direct assay /// 0043248 // proteasome assembly // inferred from direct assay </td> <td> 0000502 // proteasome complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0061133 // endopeptidase activator activity // inferred from direct assay /// 0070628 // proteasome binding // inferred from direct assay </td> <td> -162.70 </td> <td> 581.15 </td> <td> -5.00 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208795_s_at </td> <td> 208795_s_at </td> <td> D55716 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D55716.1 /DEF=Human mRNA for P1cdc47, complete cds. /FEA=mRNA /GEN=P1cdc47 /PROD=P1cdc47 /DB_XREF=gi:1255616 /UG=Hs.77152 minichromosome maintenance deficient (S. cerevisiae) 7 /FL=gb:D55716.1 </td> <td> D55716 </td> <td> minichromosome maintenance complex component 7 </td> <td> MCM7 </td> <td> 4176 </td> <td> NM_001278595 /// NM_005916 /// NM_182776 /// XM_005250348 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006268 // DNA unwinding involved in DNA replication // inferred from electronic annotation /// 0006270 // DNA replication initiation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0015979 // photosynthesis // inferred from electronic annotation /// 0015995 // chlorophyll biosynthetic process // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation </td> <td> 0000785 // chromatin // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0042555 // MCM complex // inferred from direct assay /// 0042555 // MCM complex // inferred from mutant phenotype </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016851 // magnesium chelatase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> -69.40 </td> <td> 186.12 </td> <td> -5.00 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201191_at </td> <td> 201191_at </td> <td> H15647 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:H15647 /FEA=EST /DB_XREF=gi:880467 /DB_XREF=est:ym27b09.s1 /CLONE=IMAGE:49287 /UG=Hs.79709 phosphotidylinositol transfer protein /FL=gb:D30036.1 gb:M73704.1 gb:NM_006224.1 </td> <td> H15647 </td> <td> phosphatidylinositol transfer protein, alpha </td> <td> PITPNA </td> <td> 5306 </td> <td> NM_006224 </td> <td> 0006629 // lipid metabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0015914 // phospholipid transport // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0008525 // phosphatidylcholine transporter activity // traceable author statement /// 0008526 // phosphatidylinositol transporter activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0070540 // stearic acid binding // inferred from electronic annotation </td> <td> 57.15 </td> <td> 106.75 </td> <td> 5.00 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 221622_s_at </td> <td> 221622_s_at </td> <td> AF246240 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF246240.1 /DEF=Homo sapiens HT026 mRNA, complete cds. /FEA=mRNA /PROD=HT026 /DB_XREF=gi:12005514 /UG=Hs.24371 uncharacterized hypothalamus protein HT007 /FL=gb:AF246240.1 </td> <td> AF246240 </td> <td> transmembrane protein 126B </td> <td> TMEM126B </td> <td> 55863 </td> <td> NM_001193537 /// NM_001193538 /// NM_001256546 /// NM_001256547 /// NM_018480 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td>  </td> <td> 82.45 </td> <td> 322.95 </td> <td> 5.00 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209193_at </td> <td> 209193_at </td> <td> M24779 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M24779.1 /DEF=Homo sapiens protein kinase-related oncogene (PIM1) mRNA, complete cds.  /FEA=mRNA /GEN=PIM1 /PROD=protein kinase /DB_XREF=gi:1066790 /UG=Hs.81170 pim-1 oncogene /FL=gb:M24779.1 gb:M16750.1 gb:M54915.1 gb:NM_002648.1 </td> <td> M24779 </td> <td> Pim-1 proto-oncogene, serine/threonine kinase </td> <td> PIM1 </td> <td> 5292 </td> <td> NM_001243186 /// NM_002648 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030212 // hyaluronan metabolic process // inferred from electronic annotation /// 0031659 // positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0043024 // ribosomal small subunit binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -63.50 </td> <td> 69.80 </td> <td> -5.00 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202946_s_at </td> <td> 202946_s_at </td> <td> NM_014962 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014962.1 /DEF=Homo sapiens KIAA0952 protein (KIAA0952), mRNA. /FEA=mRNA /GEN=KIAA0952 /PROD=KIAA0952 protein /DB_XREF=gi:7662401 /UG=Hs.7935 KIAA0952 protein /FL=gb:AB023169.1 gb:NM_014962.1 </td> <td> NM_014962 </td> <td> BTB (POZ) domain containing 3 </td> <td> BTBD3 </td> <td> 22903 </td> <td> NM_001282550 /// NM_001282551 /// NM_001282552 /// NM_001282554 /// NM_014962 /// NM_181443 /// XM_006723550 /// XM_006723551 </td> <td> 0007399 // nervous system development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from sequence or structural similarity /// 0048813 // dendrite morphogenesis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 54.30 </td> <td> 96.62 </td> <td> 5.00 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201020_at </td> <td> 201020_at </td> <td> NM_003405 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003405.1 /DEF=Homo sapiens tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, eta polypeptide (YWHAH), mRNA.  /FEA=mRNA /GEN=YWHAH /PROD=tyrosine 3-monooxygenasetryptophan5-monooxygenase activation protein, eta polypeptide /DB_XREF=gi:4507950 /UG=Hs.75544 tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, eta polypeptide /FL=gb:BC003047.1 gb:L20422.1 gb:NM_003405.1 </td> <td> NM_003405 </td> <td> tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta </td> <td> YWHAH </td> <td> 7533 </td> <td> NM_003405 </td> <td> 0002028 // regulation of sodium ion transport // inferred from direct assay /// 0006713 // glucocorticoid catabolic process // inferred from direct assay /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006915 // apoptotic process // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0042921 // glucocorticoid receptor signaling pathway // inferred from direct assay /// 0045664 // regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0048167 // regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0050774 // negative regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0086010 // membrane depolarization during action potential // inferred from direct assay /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement /// 2000649 // regulation of sodium ion transmembrane transporter activity // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0014704 // intercalated disc // inferred by curator /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005159 // insulin-like growth factor receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0017080 // sodium channel regulator activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from sequence or structural similarity /// 0035259 // glucocorticoid receptor binding // inferred from physical interaction /// 0044325 // ion channel binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> 92.53 </td> <td> 267.66 </td> <td> 5.00 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212460_at </td> <td> 212460_at </td> <td> BE738425 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE738425 /FEA=EST /DB_XREF=gi:10152417 /DB_XREF=est:601572441T1 /CLONE=IMAGE:3839147 /UG=Hs.241507 ribosomal protein S6 </td> <td> BE738425 </td> <td> serine palmitoyltransferase, small subunit A </td> <td> SPTSSA </td> <td> 171546 </td> <td> NM_138288 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0017059 // serine C-palmitoyltransferase complex // inferred from direct assay </td> <td> 0004758 // serine C-palmitoyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 69.30 </td> <td> 189.38 </td> <td> 4.99 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 214949_at </td> <td> 214949_at </td> <td> AL050136 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL050136.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586L141 (from clone DKFZp586L141). /FEA=mRNA /DB_XREF=gi:4884346 /UG=Hs.140945 Homo sapiens mRNA; cDNA DKFZp586L141 (from clone DKFZp586L141) </td> <td> AL050136 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 60.80 </td> <td> 132.10 </td> <td> 4.99 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209195_s_at </td> <td> 209195_s_at </td> <td> AF250226 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF250226.1 /DEF=Homo sapiens adenylyl cyclase type VI mRNA, complete cds. /FEA=mRNA /PROD=adenylyl cyclase type VI /DB_XREF=gi:9049782 /UG=Hs.12373 adenylate cyclase 6 /FL=gb:NM_015270.2 gb:AF250226.1 </td> <td> AF250226 </td> <td> adenylate cyclase 6 </td> <td> ADCY6 </td> <td> 112 </td> <td> NM_015270 /// NM_020983 /// XM_005268605 /// XM_006719209 /// XM_006719210 /// XM_006719211 /// XM_006719212 /// XM_006719213 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // inferred from direct assay /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007212 // dopamine receptor signaling pathway // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009190 // cyclic nucleotide biosynthetic process // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from sequence or structural similarity /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from direct assay /// 0071870 // cellular response to catecholamine stimulus // inferred from direct assay </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004016 // adenylate cyclase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016849 // phosphorus-oxygen lyase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 89.43 </td> <td> 107.51 </td> <td> 4.99 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209598_at </td> <td> 209598_at </td> <td> AB020690 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB020690.1 /DEF=Homo sapiens mRNA for KIAA0883 protein, complete cds. /FEA=mRNA /GEN=KIAA0883 /PROD=KIAA0883 protein /DB_XREF=gi:4240254 /UG=Hs.7782 paraneoplastic antigen MA2 /FL=gb:AF286487.1 gb:NM_007257.1 gb:AB020690.1 </td> <td> AB020690 </td> <td> paraneoplastic Ma antigen 2 </td> <td> PNMA2 </td> <td> 10687 </td> <td> NM_007257 </td> <td> 0006915 // apoptotic process // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 49.55 </td> <td> 63.12 </td> <td> 4.99 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 207535_s_at </td> <td> 207535_s_at </td> <td> NM_002502 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002502.1 /DEF=Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49p100) (NFKB2), mRNA.  /FEA=mRNA /GEN=NFKB2 /PROD=nuclear factor of kappa light polypeptide geneenhancer in B-cells 2 (p49p100) /DB_XREF=gi:4505382 /UG=Hs.73090 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49p100) /FL=gb:NM_002502.1 </td> <td> NM_002502 </td> <td> nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) </td> <td> NFKB2 </td> <td> 4791 </td> <td> NM_001077494 /// NM_001261403 /// NM_001288724 /// NM_002502 /// XM_005269860 /// XM_005269861 /// XM_006717869 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002268 // follicular dendritic cell differentiation // inferred from electronic annotation /// 0002467 // germinal center formation // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0048536 // spleen development // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0033257 // Bcl3/NF-kappaB2 complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -52.43 </td> <td> 58.76 </td> <td> -4.98 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212074_at </td> <td> 212074_at </td> <td> BE972774 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE972774 /FEA=EST /DB_XREF=gi:10586110 /DB_XREF=est:601652004F1 /CLONE=IMAGE:3935281 /UG=Hs.7531 KIAA0810 protein </td> <td> BE972774 </td> <td> Sad1 and UNC84 domain containing 1 </td> <td> SUN1 </td> <td> 23353 </td> <td> NM_001130965 /// NM_001171944 /// NM_001171945 /// NM_001171946 /// NM_025154 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006998 // nuclear envelope organization // inferred from genetic interaction /// 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from mutant phenotype /// 0090286 // cytoskeletal anchoring at nuclear membrane // inferred from direct assay /// 0090292 // nuclear matrix anchoring at nuclear membrane // inferred from direct assay </td> <td> 0002080 // acrosomal membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005639 // integral component of nuclear inner membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0034993 // SUN-KASH complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071818 // BAT3 complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from electronic annotation </td> <td> 54.72 </td> <td> 206.16 </td> <td> 4.98 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 219353_at </td> <td> 219353_at </td> <td> NM_017687 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017687.1 /DEF=Homo sapiens hypothetical protein FLJ20147 (FLJ20147), mRNA. /FEA=mRNA /GEN=FLJ20147 /PROD=hypothetical protein FLJ20147 /DB_XREF=gi:8923144 /UG=Hs.23984 hypothetical protein FLJ20147 /FL=gb:NM_017687.1 </td> <td> NM_017687 </td> <td> NHL repeat containing 2 </td> <td> NHLRC2 </td> <td> 374354 </td> <td> NM_198514 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 40.50 </td> <td> 36.20 </td> <td> 4.98 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 220486_x_at </td> <td> 220486_x_at </td> <td> NM_017698 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017698.1 /DEF=Homo sapiens hypothetical protein FLJ20173 (FLJ20173), mRNA. /FEA=mRNA /GEN=FLJ20173 /PROD=hypothetical protein FLJ20173 /DB_XREF=gi:8923168 /UG=Hs.5472 hypothetical protein FLJ20173 /FL=gb:NM_017698.1 </td> <td> NM_017698 </td> <td> uncharacterized LOC101928589 /// transmembrane protein 164 </td> <td> LOC101928589 /// TMEM164 </td> <td> 84187 /// 101928589 </td> <td> NM_017698 /// NM_032227 /// XM_005262205 /// XM_005262206 /// XM_005262208 /// XM_005262239 /// XM_006724708 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 79.45 </td> <td> 130.62 </td> <td> 4.98 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 216210_x_at </td> <td> 216210_x_at </td> <td> AA046650 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA046650 /FEA=EST /DB_XREF=gi:1524566 /DB_XREF=est:zk72e08.s1 /CLONE=IMAGE:488390 /UG=Hs.40342 putative nuclear protein </td> <td> AA046650 </td> <td> TRIO and F-actin binding protein </td> <td> TRIOBP </td> <td> 11078 </td> <td> NM_001039141 /// NM_007032 /// NM_138632 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0030047 // actin modification // non-traceable author statement /// 0051016 // barbed-end actin filament capping // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // non-traceable author statement /// 0030496 // midbody // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017049 // GTP-Rho binding // non-traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0045159 // myosin II binding // non-traceable author statement /// 0051015 // actin filament binding // inferred from direct assay </td> <td> 95.78 </td> <td> 204.71 </td> <td> 4.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 219146_at </td> <td> 219146_at </td> <td> NM_024683 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024683.1 /DEF=Homo sapiens hypothetical protein FLJ22729 (FLJ22729), mRNA. /FEA=mRNA /GEN=FLJ22729 /PROD=hypothetical protein FLJ22729 /DB_XREF=gi:13375953 /UG=Hs.94891 hypothetical protein FLJ22729 /FL=gb:NM_024683.1 </td> <td> NM_024683 </td> <td> transcription elongation factor, mitochondrial </td> <td> TEFM </td> <td> 79736 </td> <td> NM_024683 /// XM_006722084 </td> <td> 0006119 // oxidative phosphorylation // inferred from mutant phenotype /// 0006259 // DNA metabolic process // inferred from direct assay /// 0006264 // mitochondrial DNA replication // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006390 // transcription from mitochondrial promoter // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008821 // crossover junction endodeoxyribonuclease activity // inferred from direct assay /// 0030337 // DNA polymerase processivity factor activity // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 40.92 </td> <td> 39.36 </td> <td> 4.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 200618_at </td> <td> 200618_at </td> <td> NM_006148 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006148.1 /DEF=Homo sapiens LIM and SH3 protein 1 (LASP1), mRNA. /FEA=mRNA /GEN=LASP1 /PROD=LIM and SH3 protein 1 /DB_XREF=gi:5453709 /UG=Hs.75080 LIM and SH3 protein 1 /FL=gb:NM_006148.1 </td> <td> NM_006148 </td> <td> LIM and SH3 protein 1 </td> <td> LASP1 </td> <td> 3927 </td> <td> NM_001271608 /// NM_006148 /// NR_073384 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from sequence or structural similarity /// 0009967 // positive regulation of signal transduction // traceable author statement /// 0034220 // ion transmembrane transport // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015075 // ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation </td> <td> 158.87 </td> <td> 689.26 </td> <td> 4.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212061_at </td> <td> 212061_at </td> <td> AB002330 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB002330.1 /DEF=Human mRNA for KIAA0332 gene, partial cds. /FEA=mRNA /GEN=KIAA0332 /DB_XREF=gi:2224604 /UG=Hs.7976 KIAA0332 protein </td> <td> AB002330 </td> <td> U2 snRNP-associated SURP domain containing </td> <td> U2SURP </td> <td> 23350 </td> <td> NM_001080415 /// XM_005247246 /// XM_005247248 /// XM_005247249 </td> <td> 0006396 // RNA processing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 45.25 </td> <td> 32.90 </td> <td> 4.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217913_at </td> <td> 217913_at </td> <td> NM_013245 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013245.1 /DEF=Homo sapiens vacuolar sorting protein 4 (VPS4), mRNA. /FEA=mRNA /GEN=VPS4 /PROD=vacuolar sorting protein 4 /DB_XREF=gi:7019568 /UG=Hs.234839 vacuolar sorting protein 4 /FL=gb:AF159063.1 gb:AF112215.1 gb:NM_013245.1 </td> <td> NM_013245 </td> <td> vacuolar protein sorting 4 homolog A (S. cerevisiae) </td> <td> VPS4A </td> <td> 27183 </td> <td> NM_013245 </td> <td> 0000910 // cytokinesis // inferred from direct assay /// 0006200 // ATP catabolic process // non-traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009838 // abscission // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from direct assay /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0031565 // cytokinesis checkpoint // inferred from mutant phenotype /// 0032466 // negative regulation of cytokinesis // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement </td> <td> 0000815 // ESCRT III complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0009378 // four-way junction helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042623 // ATPase activity, coupled // non-traceable author statement </td> <td> 69.40 </td> <td> 196.22 </td> <td> 4.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 211185_s_at </td> <td> 211185_s_at </td> <td> AF130099 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF130099.1 /DEF=Homo sapiens clone FLC1464 PRO3102 mRNA, complete cds. /FEA=mRNA /PROD=PRO3102 /DB_XREF=gi:11493501 /UG=Hs.13453 splicing factor 3b, subunit 1, 155kD /FL=gb:AF130099.1 </td> <td> AF130099 </td> <td> splicing factor 3b, subunit 1, 155kDa </td> <td> SF3B1 </td> <td> 23451 </td> <td> NM_001005526 /// NM_012433 /// XM_005246428 /// XR_241300 /// XR_241301 /// XR_241302 </td> <td> 0000375 // RNA splicing, via transesterification reactions // non-traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // non-traceable author statement /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -150.38 </td> <td> 864.51 </td> <td> -4.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201995_at </td> <td> 201995_at </td> <td> NM_000127 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000127.1 /DEF=Homo sapiens exostoses (multiple) 1 (EXT1), mRNA. /FEA=mRNA /GEN=EXT1 /PROD=exostoses (multiple) 1 /DB_XREF=gi:4557570 /UG=Hs.184161 exostoses (multiple) 1 /FL=gb:BC001174.1 gb:NM_000127.1 </td> <td> NM_000127 </td> <td> exostosin glycosyltransferase 1 </td> <td> EXT1 </td> <td> 2131 </td> <td> NM_000127 </td> <td> 0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006024 // glycosaminoglycan biosynthetic process // inferred from direct assay /// 0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007369 // gastrulation // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from direct assay /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from sequence or structural similarity /// 0015014 // heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process // inferred from mutant phenotype /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0033692 // cellular polysaccharide biosynthetic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0072498 // embryonic skeletal joint development // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // non-traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0031227 // intrinsic component of endoplasmic reticulum membrane // inferred from electronic annotation </td> <td> 0008375 // acetylglucosaminyltransferase activity // inferred from direct assay /// 0015020 // glucuronosyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from direct assay /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0042328 // heparan sulfate N-acetylglucosaminyltransferase activity // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0050508 // glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity // inferred from sequence or structural similarity /// 0050508 // glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity // non-traceable author statement /// 0050509 // N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity // inferred from sequence or structural similarity /// 0050509 // N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity // non-traceable author statement </td> <td> -187.53 </td> <td> 428.34 </td> <td> -4.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 210817_s_at </td> <td> 210817_s_at </td> <td> BC004130 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004130.1 /DEF=Homo sapiens, nuclear domain 10 protein, clone MGC:1399, mRNA, complete cds.  /FEA=mRNA /PROD=nuclear domain 10 protein /DB_XREF=gi:13278698 /UG=Hs.154230 nuclear domain 10 protein /FL=gb:BC004130.1 </td> <td> BC004130 </td> <td> calcium binding and coiled-coil domain 2 </td> <td> CALCOCO2 </td> <td> 10241 </td> <td> NM_001261390 /// NM_001261391 /// NM_001261393 /// NM_001261395 /// NM_005831 </td> <td> 0016032 // viral process // traceable author statement /// 0034341 // response to interferon-gamma // inferred from direct assay </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> -104.47 </td> <td> 210.29 </td> <td> -4.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213296_at </td> <td> 213296_at </td> <td> BF339133 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF339133 /FEA=EST /DB_XREF=gi:11285556 /DB_XREF=est:602038434F1 /CLONE=IMAGE:4186304 /UG=Hs.247220 peroxisome biogenesis factor 10 </td> <td> BF339133 </td> <td> retention in endoplasmic reticulum sorting receptor 1 </td> <td> RER1 </td> <td> 11079 </td> <td> NM_007033 /// XM_005244713 /// XM_006710305 /// XM_006710306 /// XM_006710307 </td> <td> 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030173 // integral component of Golgi membrane // inferred from direct assay </td> <td>  </td> <td> 42.75 </td> <td> 107.12 </td> <td> 4.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208828_at </td> <td> 208828_at </td> <td> BC004170 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004170.1 /DEF=Homo sapiens, histone fold protein CHRAC17; DNA polymerase epsilon p17 subunit, clone MGC:2725, mRNA, complete cds.  /FEA=mRNA /PROD=histone fold protein CHRAC17; DNA polymeraseepsilon p17 subunit /DB_XREF=gi:13278800 /UG=Hs.108112 histone fold protein CHRAC17; DNA polymerase epsilon p17 subunit /FL=gb:BC003166.1 gb:BC004170.1 gb:AF226077.1 gb:NM_017443.1 </td> <td> BC004170 </td> <td> polymerase (DNA directed), epsilon 3, accessory subunit </td> <td> POLE3 </td> <td> 54107 </td> <td> NM_001278255 /// NM_017443 /// NR_027261 </td> <td> 0006260 // DNA replication // traceable author statement /// 0006261 // DNA-dependent DNA replication // inferred from electronic annotation /// 0006261 // DNA-dependent DNA replication // traceable author statement /// 0043966 // histone H3 acetylation // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0008622 // epsilon DNA polymerase complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 94.52 </td> <td> 214.29 </td> <td> 4.96 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217043_s_at </td> <td> 217043_s_at </td> <td> U95822 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U95822.1 /DEF=Human putative transmembrane GTPase mRNA, partial cds. /FEA=mRNA /GEN=fzo /PROD=putative transmembrane GTPase /DB_XREF=gi:2252803 /UG=Hs.197877 hypothetical protein FLJ20693 </td> <td> U95822 </td> <td> mitofusin 1 </td> <td> MFN1 </td> <td> 55669 </td> <td> NM_017927 /// NM_033540 /// XM_005247595 /// XM_005247596 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0008053 // mitochondrial fusion // inferred from direct assay /// 0008053 // mitochondrial fusion // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 49.43 </td> <td> 94.56 </td> <td> 4.96 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208682_s_at </td> <td> 208682_s_at </td> <td> AF126181 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF126181.1 /DEF=Homo sapiens breast cancer-associated gene 1 protein (BCG1) mRNA, complete cds.  /FEA=mRNA /GEN=BCG1 /PROD=breast cancer-associated gene 1 protein /DB_XREF=gi:4732088 /UG=Hs.4943 hepatocellular carcinoma associated protein; breast cancer associated gene 1 /FL=gb:NM_006787.1 gb:BC000304.1 gb:U92544.1 gb:AF126181.1 gb:AF128527.1 gb:AF128528.1 </td> <td> AF126181 </td> <td> melanoma antigen family D, 2 </td> <td> MAGED2 </td> <td> 10916 </td> <td> NM_014599 /// NM_177433 /// NM_201222 </td> <td>  </td> <td> 0016020 // membrane // inferred from direct assay </td> <td>  </td> <td> 110.45 </td> <td> 265.23 </td> <td> 4.96 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201964_at </td> <td> 201964_at </td> <td> N64643 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N64643 /FEA=EST /DB_XREF=gi:1212472 /DB_XREF=est:yz87a06.s1 /CLONE=IMAGE:290002 /UG=Hs.154919 KIAA0625 protein /FL=gb:NM_015046.1 </td> <td> N64643 </td> <td> senataxin </td> <td> SETX </td> <td> 23064 </td> <td> NM_015046 /// XM_005272171 /// XM_005272172 /// XM_005272173 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from direct assay /// 0006369 // termination of RNA polymerase II transcription // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred by curator /// 0003678 // DNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 45.00 </td> <td> 114.58 </td> <td> 4.96 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 205449_at </td> <td> 205449_at </td> <td> NM_013299 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013299.1 /DEF=Homo sapiens protein predicted by clone 23627 (HSU79266), mRNA. /FEA=mRNA /GEN=HSU79266 /PROD=protein predicted by clone 23627 /DB_XREF=gi:9558738 /UG=Hs.23642 protein predicted by clone 23627 /FL=gb:U79266.1 gb:NM_013299.1 </td> <td> NM_013299 </td> <td> SAC3 domain containing 1 </td> <td> SAC3D1 </td> <td> 29901 </td> <td> NM_013299 /// XM_005273960 /// XM_005273961 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0046426 // negative regulation of JAK-STAT cascade // inferred from electronic annotation /// 0050776 // regulation of immune response // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051298 // centrosome duplication // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 49.15 </td> <td> 29.80 </td> <td> 4.95 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202309_at </td> <td> 202309_at </td> <td> NM_005956 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005956.2 /DEF=Homo sapiens methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase (MTHFD1), mRNA.  /FEA=mRNA /GEN=MTHFD1 /PROD=methylenetetrahydrofolate dehydrogenase (NADP+dependent), methenyltetrahydrofolate cyclohydrolase,formyltetrahydrofolate synthetase /DB_XREF=gi:13699867 /UG=Hs.172665 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase /FL=gb:NM_005956.2 gb:J04031.1 </td> <td> NM_005956 </td> <td> methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase </td> <td> MTHFD1 </td> <td> 4522 </td> <td> NM_005956 </td> <td> 0000105 // histidine biosynthetic process // inferred from electronic annotation /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // not recorded /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0009396 // folic acid-containing compound biosynthetic process // inferred from electronic annotation /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046655 // folic acid metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004329 // formate-tetrahydrofolate ligase activity // not recorded /// 0004329 // formate-tetrahydrofolate ligase activity // traceable author statement /// 0004477 // methenyltetrahydrofolate cyclohydrolase activity // not recorded /// 0004477 // methenyltetrahydrofolate cyclohydrolase activity // traceable author statement /// 0004486 // methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity // traceable author statement /// 0004488 // methylenetetrahydrofolate dehydrogenase (NADP+) activity // not recorded /// 0005524 // ATP binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> 71.25 </td> <td> 230.65 </td> <td> 4.95 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 221745_at </td> <td> 221745_at </td> <td> BE538424 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE538424 /FEA=EST /DB_XREF=gi:9767069 /DB_XREF=est:601068256F1 /CLONE=IMAGE:3454693 /UG=Hs.288283 Homo sapiens cDNA: FLJ22355 fis, clone HRC06344 </td> <td> BE538424 </td> <td> DDB1 and CUL4 associated factor 7 </td> <td> DCAF7 </td> <td> 10238 </td> <td> NM_001003725 /// NM_005828 /// NR_073585 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0016363 // nuclear matrix // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0080008 // Cul4-RING E3 ubiquitin ligase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 48.82 </td> <td> 77.49 </td> <td> 4.95 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 216973_s_at </td> <td> 216973_s_at </td> <td> S49765 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:S49765.1 /DEF=homeobox gene human, mRNA Partial, 769 nt. /FEA=mRNA /GEN=homeobox gene /DB_XREF=gi:233572 /UG=Hs.819 homeo box B7 </td> <td> S49765 </td> <td> homeobox B7 </td> <td> HOXB7 </td> <td> 3217 </td> <td> NM_004502 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0007275 // multicellular organismal development // non-traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0030099 // myeloid cell differentiation // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 108.65 </td> <td> 205.47 </td> <td> 4.95 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208433_s_at </td> <td> 208433_s_at </td> <td> NM_017522 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017522.1 /DEF=Homo sapiens apolipoprotein E receptor 2 (HSZ75190), mRNA. /FEA=mRNA /GEN=HSZ75190 /PROD=apolipoprotein E receptor 2 /DB_XREF=gi:8923799 /UG=Hs.54481 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor /FL=gb:NM_017522.1 </td> <td> NM_017522 </td> <td> low density lipoprotein receptor-related protein 8, apolipoprotein e receptor </td> <td> LRP8 </td> <td> 7804 </td> <td> NM_001018054 /// NM_004631 /// NM_017522 /// NM_033300 /// XM_005271173 /// XM_005271174 /// XM_005271175 /// XM_005271176 /// XM_006710881 /// XM_006710882 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001523 // retinoid metabolic process // traceable author statement /// 0006508 // proteolysis // non-traceable author statement /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006897 // endocytosis // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // non-traceable author statement /// 0021541 // ammon gyrus development // inferred from sequence or structural similarity /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021819 // layer formation in cerebral cortex // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0032793 // positive regulation of CREB transcription factor activity // inferred from sequence or structural similarity /// 0038026 // reelin-mediated signaling pathway // inferred from sequence or structural similarity /// 0042493 // response to drug // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050804 // regulation of synaptic transmission // inferred from sequence or structural similarity /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from sequence or structural similarity /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation /// 1900006 // positive regulation of dendrite development // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred by curator /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008035 // high-density lipoprotein particle binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from electronic annotation /// 0030229 // very-low-density lipoprotein particle receptor activity // inferred from direct assay /// 0034185 // apolipoprotein binding // inferred by curator /// 0038025 // reelin receptor activity // inferred from sequence or structural similarity </td> <td> 54.28 </td> <td> 65.31 </td> <td> 4.95 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204823_at </td> <td> 204823_at </td> <td> NM_014903 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014903.1 /DEF=Homo sapiens KIAA0938 protein (KIAA0938), mRNA. /FEA=mRNA /GEN=KIAA0938 /PROD=KIAA0938 protein /DB_XREF=gi:7662389 /UG=Hs.174188 KIAA0938 protein /FL=gb:AB023155.1 gb:NM_014903.1 </td> <td> NM_014903 </td> <td> neuron navigator 3 </td> <td> NAV3 </td> <td> 89795 </td> <td> NM_001024383 /// NM_014903 /// XM_005269215 /// XM_006719675 /// XM_006719676 /// XM_006719677 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> -207.25 </td> <td> 248.75 </td> <td> -4.94 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 205567_at </td> <td> 205567_at </td> <td> NM_003654 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003654.1 /DEF=Homo sapiens carbohydrate (chondroitin 6keratan) sulfotransferase 1 (CHST1), mRNA.  /FEA=mRNA /GEN=CHST1 /PROD=carbohydrate (chondroitin 6keratan)sulfotransferase 1 /DB_XREF=gi:4502840 /UG=Hs.104576 carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 /FL=gb:U65637.1 gb:AB003791.1 gb:AF090137.1 gb:NM_003654.1 </td> <td> NM_003654 </td> <td> carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 </td> <td> CHST1 </td> <td> 8534 </td> <td> NM_003654 /// XM_006718356 /// XM_006718357 /// XR_428858 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0005976 // polysaccharide metabolic process // traceable author statement /// 0006012 // galactose metabolic process // inferred from direct assay /// 0006790 // sulfur compound metabolic process // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0018146 // keratan sulfate biosynthetic process // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0042339 // keratan sulfate metabolic process // inferred from direct assay /// 0042339 // keratan sulfate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement </td> <td> 0008146 // sulfotransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0045130 // keratan sulfotransferase activity // inferred from direct assay </td> <td> 72.95 </td> <td> 291.02 </td> <td> 4.94 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 205618_at </td> <td> 205618_at </td> <td> NM_000950 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000950.1 /DEF=Homo sapiens proline-rich Gla (G-carboxyglutamic acid) polypeptide 1 (PRRG1), mRNA.  /FEA=mRNA /GEN=PRRG1 /PROD=proline-rich Gla (G-carboxyglutamic acid)polypeptide 1 /DB_XREF=gi:4506134 /UG=Hs.40637 proline-rich Gla (G-carboxyglutamic acid) polypeptide 1 /FL=gb:AF009242.1 gb:NM_000950.1 </td> <td> NM_000950 </td> <td> proline rich Gla (G-carboxyglutamic acid) 1 </td> <td> PRRG1 </td> <td> 5638 </td> <td> NM_000950 /// NM_001142395 /// NM_001173486 /// NM_001173489 /// NM_001173490 </td> <td>  </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation </td> <td> 77.85 </td> <td> 204.93 </td> <td> 4.94 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201853_s_at </td> <td> 201853_s_at </td> <td> NM_021873 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021873.1 /DEF=Homo sapiens cell division cycle 25B (CDC25B), transcript variant 3, mRNA.  /FEA=mRNA /GEN=CDC25B /PROD=cell division cycle 25B, isoform 3 /DB_XREF=gi:11641412 /UG=Hs.153752 cell division cycle 25B /FL=gb:NM_021873.1 </td> <td> NM_021873 </td> <td> cell division cycle 25B </td> <td> CDC25B </td> <td> 994 </td> <td> NM_001287516 /// NM_001287517 /// NM_001287518 /// NM_001287519 /// NM_001287520 /// NM_001287522 /// NM_001287524 /// NM_004358 /// NM_021872 /// NM_021873 /// NM_021874 /// NM_212530 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000087 // mitotic M phase // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007144 // female meiosis I // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0032467 // positive regulation of cytokinesis // inferred from mutant phenotype /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> 71.38 </td> <td> 156.94 </td> <td> 4.93 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212309_at </td> <td> 212309_at </td> <td> AV725315 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV725315 /FEA=EST /DB_XREF=gi:10830580 /DB_XREF=est:AV725315 /CLONE=HTCCAG11 /UG=Hs.108614 KIAA0627 protein; Drosophila multiple asters (Mast)-like homolog 2 </td> <td> AV725315 </td> <td> cytoplasmic linker associated protein 2 </td> <td> CLASP2 </td> <td> 23122 </td> <td> NM_001207044 /// NM_015097 /// XM_006713036 /// XM_006713037 /// XM_006713038 /// XM_006713039 /// XM_006713040 /// XM_006713041 /// XM_006713042 /// XM_006713043 /// XM_006713044 /// XM_006713045 /// XM_006713046 /// XM_006713047 /// XM_006713048 /// XM_006713049 /// XM_006713050 /// XM_006713051 /// XM_006713052 /// XM_006713053 /// XM_006713054 /// XM_006713055 /// XM_006713056 /// XM_006713057 /// XM_006713058 /// XM_006713059 /// XM_006713060 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0031110 // regulation of microtubule polymerization or depolymerization // inferred from mutant phenotype /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0034453 // microtubule anchoring // inferred from mutant phenotype /// 0036065 // fucosylation // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005828 // kinetochore microtubule // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008107 // galactoside 2-alpha-L-fucosyltransferase activity // non-traceable author statement /// 0043515 // kinetochore binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from direct assay </td> <td> 50.07 </td> <td> 49.89 </td> <td> 4.93 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204366_s_at </td> <td> 204366_s_at </td> <td> NM_001521 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001521.1 /DEF=Homo sapiens general transcription factor IIIC, polypeptide 2 (beta subunit, 110kD) (GTF3C2), mRNA.  /FEA=mRNA /GEN=GTF3C2 /PROD=general transcription factor IIIC, polypeptide 2(beta subunit, 110kD) /DB_XREF=gi:4504204 /UG=Hs.75782 general transcription factor IIIC, polypeptide 2 (beta subunit, 110kD) /FL=gb:D13636.1 gb:NM_001521.1 </td> <td> NM_001521 </td> <td> general transcription factor IIIC, polypeptide 2, beta 110kDa </td> <td> GTF3C2 </td> <td> 2976 </td> <td> NM_001035521 /// NM_001521 /// XM_005264272 /// XM_005264273 </td> <td> 0006351 // transcription, DNA-templated // inferred from direct assay /// 0006383 // transcription from RNA polymerase III promoter // inferred from direct assay /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042791 // 5S class rRNA transcription from RNA polymerase III type 1 promoter // inferred by curator /// 0042797 // tRNA transcription from RNA polymerase III promoter // inferred by curator </td> <td> 0000127 // transcription factor TFIIIC complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 69.73 </td> <td> 178.84 </td> <td> 4.93 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201549_x_at </td> <td> 201549_x_at </td> <td> NM_006618 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006618.1 /DEF=Homo sapiens putative DNAchromatin binding motif (PLU-1), mRNA. /FEA=mRNA /GEN=PLU-1 /PROD=putative DNAchromatin binding motif /DB_XREF=gi:5729977 /UG=Hs.143323 putative DNAchromatin binding motif /FL=gb:NM_006618.1 </td> <td> NM_006618 </td> <td> lysine (K)-specific demethylase 5B </td> <td> KDM5B </td> <td> 10765 </td> <td> NM_006618 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from direct assay /// 0034721 // histone H3-K4 demethylation, trimethyl-H3-K4-specific // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0032453 // histone demethylase activity (H3-K4 specific) // inferred from electronic annotation /// 0034647 // histone demethylase activity (H3-trimethyl-K4 specific) // inferred from direct assay /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -59.70 </td> <td> 188.50 </td> <td> -4.93 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217829_s_at </td> <td> 217829_s_at </td> <td> NM_006590 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006590.1 /DEF=Homo sapiens SnRNP assembly defective 1 homolog (SAD1), mRNA. /FEA=mRNA /GEN=SAD1 /PROD=SnRNP assembly defective 1 homolog /DB_XREF=gi:5730024 /UG=Hs.12820 SnRNP assembly defective 1 homolog /FL=gb:AF130096.1 gb:BC001384.1 gb:AF132955.1 gb:NM_006590.1 </td> <td> NM_006590 </td> <td> ubiquitin specific peptidase 39 </td> <td> USP39 </td> <td> 10713 </td> <td> NM_001256725 /// NM_001256726 /// NM_001256727 /// NM_001256728 /// NM_006590 /// NR_046347 /// XM_006711922 /// XM_006711923 </td> <td> 0000245 // spliceosomal complex assembly // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation </td> <td> 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 50.65 </td> <td> 70.67 </td> <td> 4.92 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202794_at </td> <td> 202794_at </td> <td> NM_002194 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002194.2 /DEF=Homo sapiens inositol polyphosphate-1-phosphatase (INPP1), mRNA. /FEA=mRNA /GEN=INPP1 /PROD=inositol polyphosphate-1-phosphatase /DB_XREF=gi:4755138 /UG=Hs.32309 inositol polyphosphate-1-phosphatase /FL=gb:L08488.1 gb:NM_002194.2 </td> <td> NM_002194 </td> <td> inositol polyphosphate-1-phosphatase </td> <td> INPP1 </td> <td> 3628 </td> <td> NM_001128928 /// NM_002194 /// XM_005246532 /// XM_006712498 </td> <td> 0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0004441 // inositol-1,4-bisphosphate 1-phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052829 // inositol-1,3,4-trisphosphate 1-phosphatase activity // traceable author statement </td> <td> 91.53 </td> <td> 228.59 </td> <td> 4.92 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202371_at </td> <td> 202371_at </td> <td> NM_024863 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024863.1 /DEF=Homo sapiens hypothetical protein FLJ21174 (FLJ21174), mRNA. /FEA=mRNA /GEN=FLJ21174 /PROD=hypothetical protein FLJ21174 /DB_XREF=gi:13376293 /UG=Hs.194329 hypothetical protein FLJ21174 /FL=gb:AF271783.1 gb:NM_024863.1 </td> <td> NM_024863 </td> <td> transcription elongation factor A (SII)-like 4 </td> <td> TCEAL4 </td> <td> 79921 </td> <td> NM_001006935 /// NM_001006936 /// NM_001006937 /// NM_024863 /// XM_005262192 /// XM_005262193 /// XM_005262194 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003746 // translation elongation factor activity // inferred from electronic annotation </td> <td> 85.47 </td> <td> 300.16 </td> <td> 4.92 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201224_s_at </td> <td> 201224_s_at </td> <td> AU147713 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU147713 /FEA=EST /DB_XREF=gi:11009234 /DB_XREF=est:AU147713 /CLONE=MAMMA1001474 /UG=Hs.18192 SerArg-related nuclear matrix protein (plenty of prolines 101-like) /FL=gb:AF048977.1 gb:NM_005839.1 </td> <td> AU147713 </td> <td> serine/arginine repetitive matrix 1 </td> <td> SRRM1 </td> <td> 10250 </td> <td> NM_005839 /// XM_005245717 /// XM_005245718 /// XM_005245719 /// XM_005245720 /// XM_005245721 /// XM_005245722 /// XR_241182 /// XR_241183 </td> <td> 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 54.45 </td> <td> 68.40 </td> <td> 4.92 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201290_at </td> <td> 201290_at </td> <td> NM_014300 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014300.1 /DEF=Homo sapiens signal peptidase complex (18kD) (SPC18), mRNA. /FEA=mRNA /GEN=SPC18 /PROD=signal peptidase complex (18kD) /DB_XREF=gi:7657608 /UG=Hs.9534 signal peptidase complex (18kD) /FL=gb:BC000359.1 gb:AF061737.1 gb:AF108945.1 gb:NM_014300.1 </td> <td> NM_014300 </td> <td> SEC11 homolog A (S. cerevisiae) </td> <td> SEC11A </td> <td> 23478 </td> <td> NM_001271918 /// NM_001271919 /// NM_001271920 /// NM_001271921 /// NM_001271922 /// NM_014300 /// NR_073518 </td> <td> 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 134.55 </td> <td> 843.05 </td> <td> 4.92 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 220342_x_at </td> <td> 220342_x_at </td> <td> NM_017992 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017992.1 /DEF=Homo sapiens hypothetical protein FLJ10083 (FLJ10083), mRNA. /FEA=mRNA /GEN=FLJ10083 /PROD=hypothetical protein FLJ10083 /DB_XREF=gi:8922223 /UG=Hs.279951 hypothetical protein FLJ10083 /FL=gb:NM_017992.1 </td> <td> NM_017992 </td> <td> ER degradation enhancer, mannosidase alpha-like 3 </td> <td> EDEM3 </td> <td> 80267 </td> <td> NM_025191 /// XM_005245499 </td> <td> 0006457 // protein folding // traceable author statement /// 0006516 // glycoprotein catabolic process // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0004569 // glycoprotein endo-alpha-1,2-mannosidase activity // inferred from electronic annotation /// 0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 50.85 </td> <td> 90.88 </td> <td> 4.92 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201076_at </td> <td> 201076_at </td> <td> NM_005008 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005008.1 /DEF=Homo sapiens non-histone chromosome protein 2 (S. cerevisiae)-like 1 (NHP2L1), mRNA.  /FEA=mRNA /GEN=NHP2L1 /PROD=non-histone chromosome protein 2 (S.cerevisiae)-like 1 /DB_XREF=gi:4826859 /UG=Hs.182255 non-histone chromosome protein 2 (S. cerevisiae)-like 1 /FL=gb:BC005358.1 gb:D50420.1 gb:AF091076.1 gb:NM_005008.1 gb:AF155235.1 </td> <td> NM_005008 </td> <td> NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) </td> <td> NHP2L1 </td> <td> 4809 </td> <td> NM_001003796 /// NM_005008 /// XM_005261620 /// XM_006724258 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031428 // box C/D snoRNP complex // non-traceable author statement </td> <td> 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030515 // snoRNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 46.85 </td> <td> 139.60 </td> <td> 4.92 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212492_s_at </td> <td> 212492_s_at </td> <td> AW237172 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW237172 /FEA=EST /DB_XREF=gi:6569561 /DB_XREF=est:xm66e04.x1 /CLONE=IMAGE:2689182 /UG=Hs.301011 KIAA0876 protein </td> <td> AW237172 </td> <td> lysine (K)-specific demethylase 4B </td> <td> KDM4B </td> <td> 23030 </td> <td> NM_015015 /// XM_005259521 /// XM_005259522 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -134.25 </td> <td> 145.85 </td> <td> -4.91 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 200625_s_at </td> <td> 200625_s_at </td> <td> NM_006367 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006367.2 /DEF=Homo sapiens adenylyl cyclase-associated protein (CAP), mRNA. /FEA=mRNA /GEN=CAP /PROD=adenylyl cyclase-associated protein /DB_XREF=gi:10938021 /UG=Hs.104125 adenylyl cyclase-associated protein /FL=gb:NM_006367.2 gb:L12168.1 gb:M98474.1 </td> <td> NM_006367 </td> <td> CAP, adenylate cyclase-associated protein 1 (yeast) </td> <td> CAP1 </td> <td> 10487 </td> <td> NM_001105530 /// NM_006367 /// XM_005270367 /// XM_005270368 /// XM_006710294 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 240.75 </td> <td> 693.05 </td> <td> 4.91 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202877_s_at </td> <td> 202877_s_at </td> <td> W72082 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W72082 /FEA=EST /DB_XREF=gi:1382588 /DB_XREF=est:zd70c06.s1 /CLONE=IMAGE:345994 /UG=Hs.97199 complement component C1q receptor /FL=gb:NM_012072.2 gb:U94333.1 </td> <td> W72082 </td> <td> CD93 molecule </td> <td> CD93 </td> <td> 22918 </td> <td> NM_012072 </td> <td> 0006909 // phagocytosis // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042116 // macrophage activation // non-traceable author statement </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred by curator /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation </td> <td> 0001849 // complement component C1q binding // inferred from direct assay /// 0004872 // receptor activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> 173.28 </td> <td> 316.21 </td> <td> 4.91 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 218854_at </td> <td> 218854_at </td> <td> NM_013352 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013352.1 /DEF=Homo sapiens squamous cell carcinoma antigen recognized by T cell (SART-2), mRNA.  /FEA=mRNA /GEN=SART-2 /PROD=squamous cell carcinoma antigen recognized by Tcell /DB_XREF=gi:7019520 /UG=Hs.58636 squamous cell carcinoma antigen recognized by T cell /FL=gb:AF098066.1 gb:NM_013352.1 </td> <td> NM_013352 </td> <td> dermatan sulfate epimerase </td> <td> DSE </td> <td> 29940 </td> <td> NM_001080976 /// NM_013352 /// XM_005266953 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // inferred from electronic annotation /// 0030208 // dermatan sulfate biosynthetic process // inferred from direct assay /// 0030208 // dermatan sulfate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0016853 // isomerase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from direct assay </td> <td> -48.52 </td> <td> 108.64 </td> <td> -4.91 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 207507_s_at </td> <td> 207507_s_at </td> <td> NM_001689 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001689.1 /DEF=Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9) isoform 3 (ATP5G3), mRNA.  /FEA=mRNA /GEN=ATP5G3 /PROD=ATP synthase, H+ transporting, mitochondrial F0complex, subunit c (subunit 9) isoform 3 /DB_XREF=gi:4502300 /UG=Hs.429 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9) isoform 3 /FL=gb:U09813.1 gb:NM_001689.1 </td> <td> NM_001689 </td> <td> ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) </td> <td> ATP5G3 </td> <td> 518 </td> <td> NM_001002258 /// NM_001190329 /// NM_001689 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation </td> <td> 303.33 </td> <td> 899.19 </td> <td> 4.90 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204656_at </td> <td> 204656_at </td> <td> AL138752 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL138752 /DEF=Human DNA sequence from clone RP11-3J10 on chromosome 9p12-13.3 Contains part of a novel gene, the 3 end of the SHB (SHB adaptor protein (a Src homology 2 ) protein ) gene, the gene for CG7943 protein, a pseudogene similar to CGI-31 protein, a ps... /FEA=mRNA_2 /DB_XREF=gi:8452480 /UG=Hs.244542 SHB adaptor protein (a Src homology 2 protein) /FL=gb:NM_003028.1 </td> <td> AL138752 </td> <td> Src homology 2 domain containing adaptor protein B </td> <td> SHB </td> <td> 6461 </td> <td> NM_003028 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // traceable author statement /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 1900194 // negative regulation of oocyte maturation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0001948 // glycoprotein binding // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -45.00 </td> <td> 45.68 </td> <td> -4.90 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209878_s_at </td> <td> 209878_s_at </td> <td> M62399 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M62399.1 /DEF=Human NF-kappa-B transcription factor p65 DNA binding subunit mRNA, complete cds.  /FEA=mRNA /PROD=NF-kappa-B transcription factor /DB_XREF=gi:189503 /UG=Hs.75569 v-rel avian reticuloendotheliosis viral oncogene homolog A (nuclear factor of kappa light polypeptide gene enhancer in B-cells 3 (p65)) /FL=gb:M62399.1 </td> <td> M62399 </td> <td> v-rel avian reticuloendotheliosis viral oncogene homolog A </td> <td> RELA </td> <td> 5970 </td> <td> NM_001145138 /// NM_001243984 /// NM_001243985 /// NM_021975 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001889 // liver development // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006117 // acetaldehyde metabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006952 // defense response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from direct assay /// 0006968 // cellular defense response // non-traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from direct assay /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010224 // response to UV-B // inferred from direct assay /// 0014040 // positive regulation of Schwann cell differentiation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0033590 // response to cobalamin // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043200 // response to amino acid // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0045084 // positive regulation of interleukin-12 biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050727 // regulation of inflammatory response // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051607 // defense response to virus // non-traceable author statement /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0070431 // nucleotide-binding oligomerization domain containing 2 signaling pathway // inferred from direct assay /// 0070555 // response to interleukin-1 // inferred from genetic interaction /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071316 // cellular response to nicotine // inferred from mutant phenotype /// 0071347 // cellular response to interleukin-1 // inferred from direct assay /// 0071354 // cellular response to interleukin-6 // inferred from mutant phenotype /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071375 // cellular response to peptide hormone stimulus // inferred from mutant phenotype /// 2000630 // positive regulation of miRNA metabolic process // inferred from mutant phenotype /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001205 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0042301 // phosphate ion binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from physical interaction /// 0070491 // repressing transcription factor binding // inferred from physical interaction /// 0071532 // ankyrin repeat binding // inferred from electronic annotation </td> <td> -77.15 </td> <td> 142.03 </td> <td> -4.90 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209064_x_at </td> <td> 209064_x_at </td> <td> AL136920 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136920.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586C051 (from clone DKFZp586C051); complete cds.  /FEA=mRNA /GEN=DKFZp586C051 /PROD=hypothetical protein /DB_XREF=gi:12053334 /UG=Hs.109643 polyadenylate binding protein-interacting protein 1 /FL=gb:AL136920.1 </td> <td> AL136920 </td> <td> poly(A) binding protein interacting protein 1 </td> <td> PAIP1 </td> <td> 10605 </td> <td> NM_006451 /// NM_182789 /// NM_183323 /// XM_005248230 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from direct assay /// 0048255 // mRNA stabilization // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from direct assay </td> <td> 60.70 </td> <td> 88.90 </td> <td> 4.90 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 205479_s_at </td> <td> 205479_s_at </td> <td> NM_002658 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002658.1 /DEF=Homo sapiens plasminogen activator, urokinase (PLAU), mRNA. /FEA=mRNA /GEN=PLAU /PROD=plasminogen activator, urokinase /DB_XREF=gi:4505862 /UG=Hs.77274 plasminogen activator, urokinase /FL=gb:M15476.1 gb:NM_002658.1 </td> <td> NM_002658 </td> <td> plasminogen activator, urokinase </td> <td> PLAU </td> <td> 5328 </td> <td> NM_001145031 /// NM_002658 /// XM_006717893 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006935 // chemotaxis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from direct assay /// 0014909 // smooth muscle cell migration // inferred from electronic annotation /// 0014910 // regulation of smooth muscle cell migration // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042730 // fibrinolysis // traceable author statement /// 0061041 // regulation of wound healing // inferred by curator /// 2000097 // regulation of smooth muscle cell-matrix adhesion // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -139.15 </td> <td> 213.97 </td> <td> -4.89 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201685_s_at </td> <td> 201685_s_at </td> <td> NM_014828 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014828.1 /DEF=Homo sapiens KIAA0737 gene product (KIAA0737), mRNA. /FEA=mRNA /GEN=KIAA0737 /PROD=KIAA0737 gene product /DB_XREF=gi:7662273 /UG=Hs.194035 KIAA0737 gene product /FL=gb:AB018280.1 gb:NM_014828.1 </td> <td> NM_014828 </td> <td> TOX high mobility group box family member 4 </td> <td> TOX4 </td> <td> 9878 </td> <td> NM_014828 </td> <td>  </td> <td> 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 45.17 </td> <td> 50.71 </td> <td> 4.89 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 218421_at </td> <td> 218421_at </td> <td> NM_022766 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022766.1 /DEF=Homo sapiens hypothetical protein FLJ23239 (FLJ23239), mRNA. /FEA=mRNA /GEN=FLJ23239 /PROD=hypothetical protein FLJ23239 /DB_XREF=gi:12232440 /UG=Hs.34516 hypothetical protein FLJ23239 /FL=gb:NM_022766.1 gb:BC004278.1 </td> <td> NM_022766 </td> <td> ceramide kinase </td> <td> CERK </td> <td> 64781 </td> <td> NM_022766 /// NM_182661 </td> <td> 0006665 // sphingolipid metabolic process // traceable author statement /// 0006672 // ceramide metabolic process // inferred from direct assay /// 0006672 // ceramide metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046834 // lipid phosphorylation // inferred from direct assay /// 0046834 // lipid phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0001729 // ceramide kinase activity // inferred from direct assay /// 0003951 // NAD+ kinase activity // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 105.48 </td> <td> 354.29 </td> <td> 4.89 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217988_at </td> <td> 217988_at </td> <td> NM_021178 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021178.1 /DEF=Homo sapiens enhancer of invasion 10 (HEI10), mRNA. /FEA=mRNA /GEN=HEI10 /PROD=enhancer of invasion 10 /DB_XREF=gi:10863978 /UG=Hs.107003 enhancer of invasion 10 /FL=gb:NM_021178.1 gb:BC000369.1 gb:BC001218.1 gb:BC004435.1 gb:AF216381.1 </td> <td> NM_021178 </td> <td> cyclin B1 interacting protein 1, E3 ubiquitin protein ligase </td> <td> CCNB1IP1 </td> <td> 57820 </td> <td> NM_021178 /// NM_182849 /// NM_182851 /// NM_182852 </td> <td> 0001825 // blastocyst formation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // inferred from sequence or structural similarity /// 0007286 // spermatid development // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035265 // organ growth // inferred from electronic annotation /// 0051026 // chiasma assembly // inferred from sequence or structural similarity </td> <td> 0000795 // synaptonemal complex // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -53.30 </td> <td> 145.72 </td> <td> -4.88 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203093_s_at </td> <td> 203093_s_at </td> <td> NM_006351 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006351.1 /DEF=Homo sapiens translocase of inner mitochondrial membrane 44 (yeast) homolog (TIM44), mRNA.  /FEA=mRNA /GEN=TIM44 /PROD=translocase of inner mitochondrial membrane 44(yeast) homolog /DB_XREF=gi:5454123 /UG=Hs.123178 translocase of inner mitochondrial membrane 44 (yeast) homolog /FL=gb:AF026030.1 gb:NM_006351.1 </td> <td> NM_006351 </td> <td> translocase of inner mitochondrial membrane 44 homolog (yeast) </td> <td> TIMM44 </td> <td> 10469 </td> <td> NM_006351 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071806 // protein transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation </td> <td> -52.15 </td> <td> 99.33 </td> <td> -4.88 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203286_at </td> <td> 203286_at </td> <td> NM_014901 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014901.1 /DEF=Homo sapiens KIAA1100 protein (KIAA1100), mRNA. /FEA=mRNA /GEN=KIAA1100 /PROD=KIAA1100 protein /DB_XREF=gi:7662485 /UG=Hs.179946 KIAA1100 protein /FL=gb:AB029023.1 gb:NM_014901.1 </td> <td> NM_014901 </td> <td> ring finger protein 44 </td> <td> RNF44 </td> <td> 22838 </td> <td> NM_014901 /// XM_005265840 /// XM_005265841 /// XM_005265842 /// XM_005265843 /// XM_005265844 /// XM_005265845 /// XM_006714831 /// XM_006714832 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -134.60 </td> <td> 200.20 </td> <td> -4.88 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 218319_at </td> <td> 218319_at </td> <td> NM_020651 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020651.2 /DEF=Homo sapiens pellino (Drosophila) homolog 1 (PELI1), mRNA. /FEA=mRNA /GEN=PELI1 /PROD=pellino protein /DB_XREF=gi:11037062 /UG=Hs.7886 pellino (Drosophila) homolog 1 /FL=gb:AF302505.1 gb:AF300987.1 gb:NM_020651.2 </td> <td> NM_020651 </td> <td> pellino E3 ubiquitin protein ligase 1 </td> <td> PELI1 </td> <td> 57162 </td> <td> NM_020651 /// XM_005264436 /// XM_005264437 </td> <td> 0000209 // protein polyubiquitination // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0008063 // Toll signaling pathway // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034141 // positive regulation of toll-like receptor 3 signaling pathway // inferred from electronic annotation /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034145 // positive regulation of toll-like receptor 4 signaling pathway // inferred from electronic annotation /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0043331 // response to dsRNA // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0050868 // negative regulation of T cell activation // inferred from electronic annotation /// 0050871 // positive regulation of B cell activation // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -91.62 </td> <td> 192.04 </td> <td> -4.88 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208892_s_at </td> <td> 208892_s_at </td> <td> BC003143 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003143.1 /DEF=Homo sapiens, dual specificity phosphatase 6, clone MGC:3789, mRNA, complete cds.  /FEA=mRNA /PROD=dual specificity phosphatase 6 /DB_XREF=gi:13111942 /UG=Hs.180383 dual specificity phosphatase 6 /FL=gb:BC003562.1 gb:BC003143.1 gb:BC005047.1 gb:AB013382.1 gb:NM_001946.1 </td> <td> BC003143 </td> <td> dual specificity phosphatase 6 </td> <td> DUSP6 </td> <td> 1848 </td> <td> NM_001946 /// NM_022652 </td> <td> 0000188 // inactivation of MAPK activity // inferred from direct assay /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // not recorded /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // not recorded /// 0042493 // response to drug // inferred from electronic annotation /// 0042663 // regulation of endodermal cell fate specification // not recorded /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051409 // response to nitrosative stress // inferred from expression pattern /// 0060420 // regulation of heart growth // not recorded /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070848 // response to growth factor // inferred from electronic annotation </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from direct assay </td> <td> -341.55 </td> <td> 795.42 </td> <td> -4.88 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201489_at </td> <td> 201489_at </td> <td> BC005020 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005020.1 /DEF=Homo sapiens, peptidylprolyl isomerase F (cyclophilin F), clone MGC:11022, mRNA, complete cds.  /FEA=mRNA /PROD=peptidylprolyl isomerase F (cyclophilin F) /DB_XREF=gi:13477126 /UG=Hs.173125 peptidylprolyl isomerase F (cyclophilin F) /FL=gb:BC005020.1 gb:M80254.1 gb:NM_005729.1 </td> <td> BC005020 </td> <td> peptidylprolyl isomerase F </td> <td> PPIF </td> <td> 10105 </td> <td> NM_005729 /// XM_005269379 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0002931 // response to ischemia // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0010849 // regulation of proton-transporting ATPase activity, rotational mechanism // inferred from sequence or structural similarity /// 0010939 // regulation of necrotic cell death // inferred from electronic annotation /// 0010940 // positive regulation of necrotic cell death // inferred from electronic annotation /// 0012501 // programmed cell death // inferred from electronic annotation /// 0032780 // negative regulation of ATPase activity // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0046902 // regulation of mitochondrial membrane permeability // inferred from sequence or structural similarity /// 0070301 // cellular response to hydrogen peroxide // inferred from mutant phenotype /// 0071243 // cellular response to arsenic-containing substance // inferred from sequence or structural similarity /// 0071277 // cellular response to calcium ion // inferred from sequence or structural similarity /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0090324 // negative regulation of oxidative phosphorylation // inferred from sequence or structural similarity /// 1902445 // regulation of mitochondrial membrane permeability involved in programmed necrotic cell death // inferred from mutant phenotype /// 2000276 // negative regulation of oxidative phosphorylation uncoupler activity // inferred from sequence or structural similarity /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0016020 // membrane // traceable author statement </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016018 // cyclosporin A binding // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation </td> <td> 116.83 </td> <td> 143.69 </td> <td> 4.88 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 214151_s_at </td> <td> 214151_s_at </td> <td> AU144243 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU144243 /FEA=EST /DB_XREF=gi:11005764 /DB_XREF=est:AU144243 /CLONE=HEMBA1001328 /UG=Hs.247118 phosphatidylinositol glycan, class B </td> <td> AU144243 </td> <td> cell cycle progression 1 /// DYX1C1-CCPG1 readthrough (NMD candidate) </td> <td> CCPG1 /// DYX1C1-CCPG1 </td> <td> 9236 /// 100533483 </td> <td> NM_001204450 /// NM_001204451 /// NM_004748 /// NM_020739 /// NR_037923 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0045787 // positive regulation of cell cycle // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 2001106 // regulation of Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 48.15 </td> <td> 80.38 </td> <td> 4.88 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212311_at </td> <td> 212311_at </td> <td> AA522514 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA522514 /FEA=EST /DB_XREF=gi:2263226 /DB_XREF=est:ni38c01.s1 /CLONE=IMAGE:979104 /UG=Hs.49500 KIAA0746 protein </td> <td> AA522514 </td> <td> sel-1 suppressor of lin-12-like 3 (C. elegans) </td> <td> SEL1L3 </td> <td> 23231 </td> <td> NM_015187 /// XM_005248143 /// XM_006713956 /// XM_006713957 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -71.95 </td> <td> 182.72 </td> <td> -4.88 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208765_s_at </td> <td> 208765_s_at </td> <td> NM_005826 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_005826.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein R (HNRPR), mRNA.  /FEA=CDS /GEN=HNRPR /PROD=heterogeneous nuclear ribonucleoprotein R /DB_XREF=gi:5031754 /UG=Hs.15265 heterogeneous nuclear ribonucleoprotein R /FL=gb:BC001449.1 gb:AF000364.1 gb:NM_005826.1 </td> <td> NM_005826 </td> <td> heterogeneous nuclear ribonucleoprotein R </td> <td> HNRNPR </td> <td> 10236 </td> <td> NM_001102397 /// NM_001102398 /// NM_001102399 /// NM_005826 /// XM_005245711 /// XM_005245712 /// XM_005245713 /// XM_005245714 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // non-traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 227.65 </td> <td> 317.73 </td> <td> 4.87 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 214246_x_at </td> <td> 214246_x_at </td> <td> AI859060 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI859060 /FEA=EST /DB_XREF=gi:5512676 /DB_XREF=est:wl66d06.x1 /CLONE=IMAGE:2429867 /UG=Hs.278295 cholinergic receptor, nicotinic, epsilon polypeptide </td> <td> AI859060 </td> <td> misshapen-like kinase 1 </td> <td> MINK1 </td> <td> 50488 </td> <td> NM_001024937 /// NM_015716 /// NM_153827 /// NM_170663 /// XM_005256664 /// XM_005256665 /// XM_005256666 /// XM_006721530 /// XM_006721531 /// XM_006721532 /// XM_006721533 /// XM_006721534 /// XM_006721535 /// XM_006721536 /// XM_006721537 /// XM_006721538 </td> <td> 0001952 // regulation of cell-matrix adhesion // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from sequence or structural similarity /// 0007254 // JNK cascade // traceable author statement /// 0007268 // synaptic transmission // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0022407 // regulation of cell-cell adhesion // inferred from mutant phenotype /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from sequence or structural similarity /// 0045060 // negative thymic T cell selection // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048813 // dendrite morphogenesis // inferred from sequence or structural similarity /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 2000311 // regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 55.77 </td> <td> 171.59 </td> <td> 4.87 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 219199_at </td> <td> 219199_at </td> <td> NM_014423 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014423.1 /DEF=Homo sapiens ALL1 fused gene from 5q31 (AF5Q31), mRNA. /FEA=mRNA /GEN=AF5Q31 /PROD=ALL1 fused gene from 5q31 /DB_XREF=gi:7656878 /UG=Hs.231967 ALL1 fused gene from 5q31 /FL=gb:AF197927.1 gb:NM_014423.1 </td> <td> NM_014423 </td> <td> AF4/FMR2 family, member 4 </td> <td> AFF4 </td> <td> 27125 </td> <td> NM_014423 /// XM_005271963 /// XM_005271964 /// XM_006714587 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -62.25 </td> <td> 76.03 </td> <td> -4.86 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203627_at </td> <td> 203627_at </td> <td> AI830698 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI830698 /FEA=EST /DB_XREF=gi:5451454 /DB_XREF=est:wj52f06.x1 /CLONE=IMAGE:2406467 /UG=Hs.239176 insulin-like growth factor 1 receptor /FL=gb:NM_000875.2 </td> <td> AI830698 </td> <td> insulin-like growth factor 1 receptor </td> <td> IGF1R </td> <td> 3480 </td> <td> NM_000875 /// NM_001291858 /// NM_152452 /// XM_005254896 /// XM_005254897 /// XM_006720486 /// XM_006720487 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006955 // immune response // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010656 // negative regulation of muscle cell apoptotic process // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase signaling // inferred by curator /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0038083 // peptidyl-tyrosine autophosphorylation // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051389 // inactivation of MAPKK activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred by curator /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // inferred from direct assay /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043559 // insulin binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from physical interaction </td> <td> -120.90 </td> <td> 194.12 </td> <td> -4.86 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213069_at </td> <td> 213069_at </td> <td> AI148659 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI148659 /FEA=EST /DB_XREF=gi:3677128 /DB_XREF=est:qc69c01.x1 /CLONE=IMAGE:1714848 /UG=Hs.296326 ESTs </td> <td> AI148659 </td> <td> heart development protein with EGF-like domains 1 </td> <td> HEG1 </td> <td> 57493 </td> <td> NM_020733 /// XM_005247666 </td> <td> 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001885 // endothelial cell development // inferred from electronic annotation /// 0001886 // endothelial cell morphogenesis // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0003017 // lymph circulation // inferred from electronic annotation /// 0003209 // cardiac atrium morphogenesis // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0007043 // cell-cell junction assembly // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0048845 // venous blood vessel morphogenesis // inferred from electronic annotation /// 0050878 // regulation of body fluid levels // inferred from electronic annotation /// 0060039 // pericardium development // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 78.45 </td> <td> 157.18 </td> <td> 4.86 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213251_at </td> <td> 213251_at </td> <td> AV712064 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV712064 /FEA=EST /DB_XREF=gi:10731370 /DB_XREF=est:AV712064 /CLONE=DCAAUD05 /UG=Hs.9456 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 </td> <td> AV712064 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 </td> <td> SMARCA5 </td> <td> 8467 </td> <td> NM_003601 </td> <td> 0000183 // chromatin silencing at rDNA // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006333 // chromatin assembly or disassembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // inferred from direct assay /// 0006334 // nucleosome assembly // traceable author statement /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006352 // DNA-templated transcription, initiation // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016584 // nucleosome positioning // inferred from direct assay /// 0034080 // centromere-specific nucleosome assembly // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0000793 // condensed chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005677 // chromatin silencing complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016589 // NURF complex // inferred from direct assay /// 0031010 // ISWI-type complex // inferred from electronic annotation /// 0031213 // RSF complex // inferred from physical interaction /// 0043596 // nuclear replication fork // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0031491 // nucleosome binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay </td> <td> 44.68 </td> <td> 111.11 </td> <td> 4.85 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 200867_at </td> <td> 200867_at </td> <td> AL031685 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL031685 /DEF=Human DNA sequence from clone RP5-963K23 on chromosome 20q13.11-13.2 Contains a KRT18 (Keratin type I, Cytoskeletal 18 (Cytokeratin 18, CK18,CYK18)) pseudogene, a gene for a novel protein, the gene for spermatogenesis associated protein PD1 (KIAA0... /FEA=mRNA_2 /DB_XREF=gi:9368423 /UG=Hs.10590 zinc finger protein 313 /FL=gb:AF265215.1 gb:NM_018683.1 </td> <td> AL031685 </td> <td> ring finger protein 114 </td> <td> RNF114 </td> <td> 55905 </td> <td> NM_018683 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 42.20 </td> <td> 60.00 </td> <td> 4.85 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 220091_at </td> <td> 220091_at </td> <td> NM_017585 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017585.2 /DEF=Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 6 (SLC2A6), mRNA.  /FEA=mRNA /GEN=SLC2A6 /PROD=sugar transporter (SLC2A6 gene) /DB_XREF=gi:9938031 /UG=Hs.244378 solute carrier family 2 (facilitated glucose transporter), member 6 /FL=gb:NM_017585.2 </td> <td> NM_017585 </td> <td> solute carrier family 2 (facilitated glucose transporter), member 6 </td> <td> SLC2A6 </td> <td> 11182 </td> <td> NM_001145099 /// NM_017585 /// XR_428513 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015758 // glucose transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // non-traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation </td> <td> -69.55 </td> <td> 75.28 </td> <td> -4.84 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208643_s_at </td> <td> 208643_s_at </td> <td> J04977 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:J04977.1 /DEF=Human Ku autoimmune antigen gene, complete cds. /FEA=mRNA /GEN=G22P1 /DB_XREF=gi:186791 /UG=Hs.84981 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining; Ku autoantigen, 80kD) /FL=gb:NM_021141.2 gb:J04977.1 gb:M30938.1 </td> <td> J04977 </td> <td> X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) </td> <td> XRCC5 </td> <td> 7520 </td> <td> NM_021141 /// XM_005246836 /// XM_005246837 </td> <td> 0000723 // telomere maintenance // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from mutant phenotype /// 0006303 // double-strand break repair via nonhomologous end joining // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0060218 // hematopoietic stem cell differentiation // inferred from electronic annotation /// 0071398 // cellular response to fatty acid // inferred from electronic annotation /// 0071475 // cellular hyperosmotic salinity response // inferred from electronic annotation /// 0071481 // cellular response to X-ray // inferred from electronic annotation /// 0075713 // establishment of integrated proviral latency // traceable author statement </td> <td> 0000783 // nuclear telomere cap complex // traceable author statement /// 0000784 // nuclear chromosome, telomeric region // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0043564 // Ku70:Ku80 complex // inferred from direct assay /// 0070419 // nonhomologous end joining complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003691 // double-stranded telomeric DNA binding // inferred from direct assay /// 0004003 // ATP-dependent DNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042162 // telomeric DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051575 // 5'-deoxyribose-5-phosphate lyase activity // inferred from mutant phenotype </td> <td> 189.15 </td> <td> 430.88 </td> <td> 4.84 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209255_at </td> <td> 209255_at </td> <td> D87454 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D87454.1 /DEF=Human mRNA for KIAA0265 gene, partial cds. /FEA=mRNA /GEN=KIAA0265 /DB_XREF=gi:1665796 /UG=Hs.192966 KIAA0265 protein /FL=gb:AF277177.1 </td> <td> D87454 </td> <td> kelch domain containing 10 </td> <td> KLHDC10 </td> <td> 23008 </td> <td> NM_014997 /// XM_005250233 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 47.57 </td> <td> 80.39 </td> <td> 4.84 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213117_at </td> <td> 213117_at </td> <td> AW138594 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW138594 /FEA=EST /DB_XREF=gi:6142912 /DB_XREF=est:UI-H-BI1-acw-b-06-0-UI.s1 /CLONE=IMAGE:2715610 /UG=Hs.106283 hypothetical protein FLJ10262 </td> <td> AW138594 </td> <td> kelch-like family member 9 </td> <td> KLHL9 </td> <td> 55958 </td> <td> NM_001040713 /// NM_018847 </td> <td> 0000910 // cytokinesis // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0030496 // midbody // inferred from direct assay /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 48.60 </td> <td> 64.33 </td> <td> 4.84 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 215235_at </td> <td> 215235_at </td> <td> AL110273 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL110273.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564P0562 (from clone DKFZp564P0562); partial cds.  /FEA=mRNA /GEN=DKFZp564P0562 /PROD=hypothetical protein /DB_XREF=gi:5817091 /UG=Hs.77196 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) </td> <td> AL110273 </td> <td> spectrin, alpha, non-erythrocytic 1 </td> <td> SPTAN1 </td> <td> 6709 </td> <td> NM_001130438 /// NM_001195532 /// NM_003127 /// XM_006717245 /// XM_006717246 /// XM_006717247 /// XM_006717248 /// XM_006717249 /// XM_006717250 /// XM_006717251 /// XM_006717252 /// XM_006717253 /// XM_006717254 </td> <td> 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0008091 // spectrin // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0032437 // cuticular plate // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0030507 // spectrin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 100.87 </td> <td> 383.21 </td> <td> 4.83 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201209_at </td> <td> 201209_at </td> <td> NM_004964 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004964.2 /DEF=Homo sapiens histone deacetylase 1 (HDAC1), mRNA. /FEA=mRNA /GEN=HDAC1 /PROD=histone deacetylase 1 /DB_XREF=gi:13128859 /UG=Hs.88556 histone deacetylase 1 /FL=gb:BC000301.1 gb:U50079.1 gb:NM_004964.2 gb:D50405.1 </td> <td> NM_004964 </td> <td> histone deacetylase 1 </td> <td> HDAC1 </td> <td> 3065 </td> <td> NM_004964 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006338 // chromatin remodeling // inferred by curator /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006476 // protein deacetylation // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0009913 // epidermal cell differentiation // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0010832 // negative regulation of myotube differentiation // inferred from mutant phenotype /// 0010870 // positive regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0016568 // chromatin modification // traceable author statement /// 0016575 // histone deacetylation // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042733 // embryonic digit morphogenesis // inferred from sequence or structural similarity /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043922 // negative regulation by host of viral transcription // inferred from mutant phenotype /// 0045786 // negative regulation of cell cycle // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from direct assay /// 0060789 // hair follicle placode formation // inferred from sequence or structural similarity /// 0061029 // eyelid development in camera-type eye // inferred from sequence or structural similarity /// 0061198 // fungiform papilla formation // inferred from sequence or structural similarity /// 0070932 // histone H3 deacetylation // inferred from direct assay /// 0070933 // histone H4 deacetylation // inferred from direct assay </td> <td> 0000118 // histone deacetylase complex // traceable author statement /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0016580 // Sin3 complex // inferred from direct assay /// 0016581 // NuRD complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001047 // core promoter binding // inferred from direct assay /// 0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004407 // histone deacetylase activity // inferred from direct assay /// 0004407 // histone deacetylase activity // inferred from mutant phenotype /// 0004407 // histone deacetylase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019213 // deacetylase activity // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from physical interaction /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0033558 // protein deacetylase activity // inferred from direct assay /// 0033558 // protein deacetylase activity // inferred from mutant phenotype /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0051059 // NF-kappaB binding // inferred from physical interaction /// 0097372 // NAD-dependent histone deacetylase activity (H3-K18 specific) // inferred from electronic annotation </td> <td> 84.62 </td> <td> 222.74 </td> <td> 4.83 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 214036_at </td> <td> 214036_at </td> <td> BE464799 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE464799 /FEA=EST /DB_XREF=gi:9510493 /DB_XREF=est:hs87a06.x1 /CLONE=IMAGE:3144178 /UG=Hs.27342 ESTs </td> <td> BE464799 </td> <td> ephrin-A5 </td> <td> EFNA5 </td> <td> 1946 </td> <td> NM_001962 /// XM_006714565 </td> <td> 0006915 // apoptotic process // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // not recorded /// 0022407 // regulation of cell-cell adhesion // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031290 // retinal ganglion cell axon guidance // inferred from electronic annotation /// 0032314 // regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0032319 // regulation of Rho GTPase activity // inferred from direct assay /// 0032956 // regulation of actin cytoskeleton organization // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0051893 // regulation of focal adhesion assembly // inferred from direct assay /// 0061178 // regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0070507 // regulation of microtubule cytoskeleton organization // inferred from direct assay </td> <td> 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0031362 // anchored component of external side of plasma membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0045499 // chemorepellent activity // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction </td> <td> 46.55 </td> <td> 116.33 </td> <td> 4.83 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212760_at </td> <td> 212760_at </td> <td> AB002347 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB002347.1 /DEF=Human mRNA for KIAA0349 gene, partial cds. /FEA=mRNA /GEN=KIAA0349 /DB_XREF=gi:2224638 /UG=Hs.15303 KIAA0349 protein </td> <td> AB002347 </td> <td> ubiquitin protein ligase E3 component n-recognin 2 </td> <td> UBR2 </td> <td> 23304 </td> <td> NM_001184801 /// NM_015255 /// XM_005248965 /// XM_005248966 </td> <td> 0006342 // chromatin silencing // inferred from sequence or structural similarity /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling // inferred from mutant phenotype /// 0033522 // histone H2A ubiquitination // inferred from sequence or structural similarity /// 0071233 // cellular response to leucine // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070728 // leucine binding // inferred from direct assay </td> <td> 72.32 </td> <td> 101.26 </td> <td> 4.83 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213848_at </td> <td> 213848_at </td> <td> AI655015 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI655015 /FEA=EST /DB_XREF=gi:4738994 /DB_XREF=est:wb66a10.x1 /CLONE=IMAGE:2310618 /UG=Hs.3843 Homo sapiens mRNA; cDNA DKFZp586F2224 (from clone DKFZp586F2224) </td> <td> AI655015 </td> <td> dual specificity phosphatase 7 </td> <td> DUSP7 </td> <td> 1849 </td> <td> NM_001947 </td> <td> 0000188 // inactivation of MAPK activity // inferred from direct assay /// 0000188 // inactivation of MAPK activity // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from direct assay </td> <td> 50.75 </td> <td> 89.78 </td> <td> 4.82 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212378_at </td> <td> 212378_at </td> <td> NM_000819 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_000819.1 /DEF=Homo sapiens phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase (GART), mRNA.  /FEA=CDS /GEN=GART /PROD=phosphoribosylglycinamide formyltransferase,phosphoribosylglycinamide synthetase,phosphoribosylaminoimidazole synthetase /DB_XREF=gi:4503914 /UG=Hs.82285 phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase /FL=gb:NM_000819.1 </td> <td> NM_000819 </td> <td> phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase </td> <td> GART </td> <td> 2618 </td> <td> NM_000819 /// NM_001136005 /// NM_001136006 /// NM_175085 /// XM_005260941 /// XM_006723988 /// XM_006723989 /// XM_006723990 </td> <td> 0003360 // brainstem development // inferred from electronic annotation /// 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006189 // 'de novo' IMP biosynthetic process // inferred from electronic annotation /// 0006544 // glycine metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009113 // purine nucleobase biosynthetic process // inferred from electronic annotation /// 0009156 // ribonucleoside monophosphate biosynthetic process // inferred from electronic annotation /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046654 // tetrahydrofolate biosynthetic process // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004637 // phosphoribosylamine-glycine ligase activity // inferred from electronic annotation /// 0004641 // phosphoribosylformylglycinamidine cyclo-ligase activity // inferred from electronic annotation /// 0004644 // phosphoribosylglycinamide formyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016742 // hydroxymethyl-, formyl- and related transferase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -77.50 </td> <td> 159.03 </td> <td> -4.82 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 31845_at </td> <td> 31845_at </td> <td> U32645 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. U32645:Human myeloid elf-1 like factor (MEF) mRNA, complete cds /cds=(382,2373) /gb=U32645 /gi=1761934 /ug=Hs.151139 /len=4167 </td> <td> U32645 </td> <td> E74-like factor 4 (ets domain transcription factor) </td> <td> ELF4 </td> <td> 2000 </td> <td> NM_001127197 /// NM_001421 /// XM_005262389 </td> <td> 0001787 // natural killer cell proliferation // inferred from sequence or structural similarity /// 0001866 // NK T cell proliferation // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0030154 // cell differentiation // not recorded /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016605 // PML body // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -51.48 </td> <td> 158.49 </td> <td> -4.82 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 215096_s_at </td> <td> 215096_s_at </td> <td> AU145746 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU145746 /FEA=EST /DB_XREF=gi:11007267 /DB_XREF=est:AU145746 /CLONE=HEMBA1005679 /UG=Hs.82193 esterase Dformylglutathione hydrolase </td> <td> AU145746 </td> <td> esterase D </td> <td> ESD </td> <td> 2098 </td> <td> NM_001984 /// XM_005266278 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0046294 // formaldehyde catabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from direct assay /// 0018738 // S-formylglutathione hydrolase activity // inferred from electronic annotation /// 0047374 // methylumbelliferyl-acetate deacetylase activity // inferred from electronic annotation /// 0052689 // carboxylic ester hydrolase activity // non-traceable author statement </td> <td> 114.45 </td> <td> 352.20 </td> <td> 4.82 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203200_s_at </td> <td> 203200_s_at </td> <td> NM_024010 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024010.1 /DEF=Homo sapiens 5-methyltetrahydrofolate-homocysteine methyltransferase reductase (MTRR), transcript variant 2, mRNA.  /FEA=mRNA /GEN=MTRR /PROD=methionine synthase reductase, isoform 2 /DB_XREF=gi:13325067 /UG=Hs.153792 5-methyltetrahydrofolate-homocysteine methyltransferase reductase /FL=gb:NM_024010.1 gb:AF121214.1 </td> <td> NM_024010 </td> <td> 5-methyltetrahydrofolate-homocysteine methyltransferase reductase </td> <td> MTRR </td> <td> 4552 </td> <td> NM_002454 /// NM_024010 /// XM_006714474 /// XR_241702 /// XR_241703 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006306 // DNA methylation // inferred from sequence or structural similarity /// 0006555 // methionine metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0009235 // cobalamin metabolic process // traceable author statement /// 0032259 // methylation // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046655 // folic acid metabolic process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0003958 // NADPH-hemoprotein reductase activity // not recorded /// 0005506 // iron ion binding // inferred from electronic annotation /// 0010181 // FMN binding // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen // not recorded /// 0016723 // oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor // inferred from direct assay /// 0030586 // [methionine synthase] reductase activity // traceable author statement /// 0050660 // flavin adenine dinucleotide binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // traceable author statement /// 0050661 // NADP binding // traceable author statement </td> <td> 45.10 </td> <td> 76.03 </td> <td> 4.82 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209143_s_at </td> <td> 209143_s_at </td> <td> AF005422 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF005422.1 /DEF=Homo sapiens reticulocyte pICln mRNA, complete cds. /FEA=mRNA /PROD=reticulocyte pICln /DB_XREF=gi:2209234 /UG=Hs.84974 chloride channel, nucleotide-sensitive, 1A /FL=gb:U53454.1 gb:AF005422.1 gb:AF026003.1 gb:NM_001293.1 gb:U17899.1 </td> <td> AF005422 </td> <td> chloride channel, nucleotide-sensitive, 1A </td> <td> CLNS1A </td> <td> 1207 </td> <td> NM_001293 </td> <td> 0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0006810 // transport // traceable author statement /// 0006821 // chloride transport // inferred from electronic annotation /// 0006884 // cell volume homeostasis // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0034709 // methylosome // inferred from direct assay /// 0034715 // pICln-Sm protein complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 80.65 </td> <td> 257.95 </td> <td> 4.82 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209226_s_at </td> <td> 209226_s_at </td> <td> U72069 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U72069.1 /DEF=Human karyopherin beta2 mRNA, complete cds. /FEA=mRNA /PROD=karyopherin beta2 /DB_XREF=gi:1657775 /UG=Hs.168075 karyopherin (importin) beta 2 /FL=gb:U72069.1 gb:U72395.1 </td> <td> U72069 </td> <td> transportin 1 </td> <td> TNPO1 </td> <td> 3842 </td> <td> NM_002270 /// NM_153188 /// XM_005248500 /// XM_005248501 </td> <td> 0000060 // protein import into nucleus, translocation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -427.40 </td> <td> 954.40 </td> <td> -4.82 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 211042_x_at </td> <td> 211042_x_at </td> <td> BC006329 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006329.1 /DEF=Homo sapiens, Similar to melanoma adhesion molecule, clone MGC:12808, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to melanoma adhesion molecule /DB_XREF=gi:13623456 /FL=gb:BC006329.1 </td> <td> BC006329 </td> <td> melanoma cell adhesion molecule /// microRNA 6756 </td> <td> MCAM /// MIR6756 </td> <td> 4162 /// 102465453 </td> <td> NM_006500 /// NR_106814 /// XM_005271551 /// XM_005271552 /// XM_006718836 /// XM_006718837 /// XM_006718838 </td> <td> 0003094 // glomerular filtration // inferred from expression pattern /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0061042 // vascular wound healing // inferred from expression pattern </td> <td> 0005886 // plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 82.68 </td> <td> 104.59 </td> <td> 4.81 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217759_at </td> <td> 217759_at </td> <td> BF431488 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF431488 /FEA=EST /DB_XREF=gi:11443602 /DB_XREF=est:7o14f01.x1 /CLONE=IMAGE:3574033 /UG=Hs.14512 DIPB protein /FL=gb:NM_017583.1 </td> <td> BF431488 </td> <td> tripartite motif containing 44 </td> <td> TRIM44 </td> <td> 54765 </td> <td> NM_017583 /// XM_006718254 </td> <td>  </td> <td> 0005622 // intracellular // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 84.88 </td> <td> 181.76 </td> <td> 4.81 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209387_s_at </td> <td> 209387_s_at </td> <td> M90657 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M90657.1 /DEF=Human tumor antigen (L6) mRNA, complete cds. /FEA=mRNA /GEN=L6 /DB_XREF=gi:186803 /UG=Hs.3337 transmembrane 4 superfamily member 1 /FL=gb:M90657.1 </td> <td> M90657 </td> <td> transmembrane 4 L six family member 1 </td> <td> TM4SF1 </td> <td> 4071 </td> <td> NM_014220 </td> <td>  </td> <td> 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 330.10 </td> <td> 939.23 </td> <td> 4.81 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201005_at </td> <td> 201005_at </td> <td> NM_001769 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001769.1 /DEF=Homo sapiens CD9 antigen (p24) (CD9), mRNA. /FEA=mRNA /GEN=CD9 /PROD=CD9 antigen (p24) /DB_XREF=gi:4502692 /UG=Hs.1244 CD9 antigen (p24) /FL=gb:M38690.1 gb:NM_001769.1 gb:L34068.1 </td> <td> NM_001769 </td> <td> CD9 molecule </td> <td> CD9 </td> <td> 928 </td> <td> NM_001769 /// XM_005253814 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0006928 // cellular component movement // inferred from direct assay /// 0007155 // cell adhesion // inferred from direct assay /// 0007338 // single fertilization // traceable author statement /// 0007342 // fusion of sperm to egg plasma membrane // inferred from direct assay /// 0007342 // fusion of sperm to egg plasma membrane // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009414 // response to water deprivation // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0030168 // platelet activation // non-traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030913 // paranodal junction assembly // inferred from sequence or structural similarity /// 0032504 // multicellular organism reproduction // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 301.90 </td> <td> 1177.03 </td> <td> 4.80 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208987_s_at </td> <td> 208987_s_at </td> <td> AK024505 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024505.1 /DEF=Homo sapiens mRNA for FLJ00115 protein, partial cds. /FEA=mRNA /GEN=FLJ00115 /PROD=FLJ00115 protein /DB_XREF=gi:10440529 /UG=Hs.219614 f-box and leucine-rich repeat protein 11 /FL=gb:AF179221.1 </td> <td> AK024505 </td> <td> lysine (K)-specific demethylase 2A </td> <td> KDM2A </td> <td> 22992 </td> <td> NM_001256405 /// NM_012308 /// NR_027473 /// XM_006718479 /// XM_006718480 /// XM_006718481 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070544 // histone H3-K36 demethylation // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0045322 // unmethylated CpG binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from electronic annotation </td> <td> -67.90 </td> <td> 179.75 </td> <td> -4.80 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 200031_s_at </td> <td> 200031_s_at </td> <td> NM_001015 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001015.1 /DEF=Homo sapiens ribosomal protein S11 (RPS11), mRNA. /FEA=mRNA /GEN=RPS11 /PROD=ribosomal protein S11 /DB_XREF=gi:4506680 /UG=Hs.182740 ribosomal protein S11 /FL=gb:NM_001015.1 </td> <td> NM_001015 </td> <td> ribosomal protein S11 /// small nucleolar RNA, C/D box 35B </td> <td> RPS11 /// SNORD35B </td> <td> 6205 /// 84546 </td> <td> NM_001015 /// NR_001285 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -553.03 </td> <td> 3219.09 </td> <td> -4.80 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 205507_at </td> <td> 205507_at </td> <td> NM_014958 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014958.1 /DEF=Homo sapiens KIAA0915 protein (KIAA0915), mRNA. /FEA=mRNA /GEN=KIAA0915 /PROD=KIAA0915 protein /DB_XREF=gi:7662377 /UG=Hs.16714 Rho guanine exchange factor (GEF) 15 /FL=gb:AB020722.1 gb:NM_014958.1 </td> <td> NM_014958 </td> <td> Rho guanine nucleotide exchange factor (GEF) 15 </td> <td> ARHGEF15 </td> <td> 22899 </td> <td> NM_025014 /// NM_173728 /// XM_005256537 /// XM_006721474 </td> <td> 0032319 // regulation of Rho GTPase activity // inferred from direct assay /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from sequence or structural similarity /// 0061299 // retina vasculature morphogenesis in camera-type eye // inferred from electronic annotation /// 2000297 // negative regulation of synapse maturation // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 49.50 </td> <td> 197.32 </td> <td> 4.80 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 211666_x_at </td> <td> 211666_x_at </td> <td> L22453 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L22453.1 /DEF=Homo sapiens HIV-1 TAR RNA binding protein (TARBP-b) mRNA, complete cds.  /FEA=mRNA /GEN=TARBP-b /DB_XREF=gi:347963 /FL=gb:L22453.1 </td> <td> L22453 </td> <td> RNA, U86 small nucleolar /// ribosomal protein L3 /// small nucleolar RNA, C/D box 83B </td> <td> RNU86 /// RPL3 /// SNORD83B </td> <td> 6122 /// 116936 /// 116938 </td> <td> NM_000967 /// NM_001033853 /// NR_000026 /// NR_000028 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1041.35 </td> <td> 3036.80 </td> <td> -4.79 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201996_s_at </td> <td> 201996_s_at </td> <td> AL524033 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL524033 /FEA=EST /DB_XREF=gi:12787526 /DB_XREF=est:AL524033 /CLONE=CS0DC003YL08 (3 prime) /UG=Hs.184245 KIAA0929 protein Msx2 interacting nuclear target (MINT) homolog /FL=gb:NM_015001.1 </td> <td> AL524033 </td> <td> spen family transcriptional repressor </td> <td> SPEN </td> <td> 23013 </td> <td> NM_015001 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -49.40 </td> <td> 91.38 </td> <td> -4.79 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 200711_s_at </td> <td> 200711_s_at </td> <td> NM_003197 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003197.2 /DEF=Homo sapiens transcription elongation factor B (SIII), polypeptide 1-like (TCEB1L), mRNA.  /FEA=mRNA /GEN=TCEB1L /PROD=transcription elongation factor B polypeptide1-like /DB_XREF=gi:6006030 /UG=Hs.171626 transcription elongation factor B (SIII), polypeptide 1-like /FL=gb:NM_003197.2 </td> <td> NM_003197 </td> <td> S-phase kinase-associated protein 1 </td> <td> SKP1 </td> <td> 6500 </td> <td> NM_006930 /// NM_170679 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0031467 // Cul7-RING ubiquitin ligase complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 88.33 </td> <td> 458.96 </td> <td> 4.79 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212370_x_at </td> <td> 212370_x_at </td> <td> AL080183 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL080183.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434O171 (from clone DKFZp434O171); partial cds.  /FEA=mRNA /GEN=DKFZp434O171 /PROD=hypothetical protein /DB_XREF=gi:5262659 /UG=Hs.13273 KIAA0592 protein </td> <td> AL080183 </td> <td> family with sequence similarity 21, member A /// family with sequence similarity 21, member C /// uncharacterized LOC101930591 </td> <td> FAM21A /// FAM21C /// LOC101930591 </td> <td> 253725 /// 387680 /// 101930591 </td> <td> NM_001005751 /// NM_001169106 /// NM_001169107 /// NM_001291398 /// NM_015262 /// NM_018232 /// XM_005269805 /// XM_005269806 /// XM_005269807 /// XM_005269808 /// XM_005269810 /// XM_006717831 /// XM_006717832 /// XR_247516 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0042147 // retrograde transport, endosome to Golgi // inferred from sequence or structural similarity </td> <td> 0005768 // endosome // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0071203 // WASH complex // inferred from direct assay /// 0071203 // WASH complex // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -60.15 </td> <td> 297.25 </td> <td> -4.79 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212790_x_at </td> <td> 212790_x_at </td> <td> BF942308 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF942308 /FEA=EST /DB_XREF=gi:12359628 /DB_XREF=est:nae91f11.x1 /CLONE=IMAGE:4119332 /UG=Hs.119122 ribosomal protein L13a </td> <td> BF942308 </td> <td> ribosomal protein L13a /// ribosomal protein L13a pseudogene 5 /// small nucleolar RNA, C/D box 32A /// small nucleolar RNA, C/D box 33 /// small nucleolar RNA, C/D box 34 /// small nucleolar RNA, C/D box 35A </td> <td> RPL13A /// RPL13AP5 /// SNORD32A /// SNORD33 /// SNORD34 /// SNORD35A </td> <td> 23521 /// 26816 /// 26817 /// 26818 /// 26819 /// 728658 </td> <td> NM_001270491 /// NM_012423 /// NR_000018 /// NR_000019 /// NR_000020 /// NR_000021 /// NR_026712 /// NR_073024 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071346 // cellular response to interferon-gamma // inferred from direct assay /// 1901194 // negative regulation of formation of translation preinitiation complex // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015934 // large ribosomal subunit // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -908.10 </td> <td> 4532.43 </td> <td> -4.79 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 218181_s_at </td> <td> 218181_s_at </td> <td> NM_017792 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017792.1 /DEF=Homo sapiens hypothetical protein FLJ20373 (FLJ20373), mRNA. /FEA=mRNA /GEN=FLJ20373 /PROD=hypothetical protein FLJ20373 /DB_XREF=gi:8923351 /UG=Hs.6631 hypothetical protein FLJ20373 /FL=gb:NM_017792.1 </td> <td> NM_017792 </td> <td> mitogen-activated protein kinase kinase kinase kinase 4 </td> <td> MAP4K4 </td> <td> 9448 </td> <td> NM_001242559 /// NM_001242560 /// NM_004834 /// NM_145686 /// NM_145687 /// XM_005264044 /// XM_005264045 /// XM_005264046 /// XM_005264047 /// XM_005264048 /// XM_005264049 /// XM_005264050 /// XM_005264052 /// XM_005264053 /// XM_005264054 /// XM_005264055 /// XM_005264056 /// XM_005264057 /// XM_005264058 /// XM_005264059 /// XM_005264060 /// XM_005264061 /// XM_005264062 /// XM_005264063 /// XM_005264064 /// XM_005264065 /// XM_005264066 /// XM_005264068 /// XM_005264069 /// XM_005264071 /// XM_006712864 /// XM_006712865 /// XM_006712866 /// XM_006712867 /// XM_006712868 /// XM_006712869 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // not recorded /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 71.53 </td> <td> 196.31 </td> <td> 4.79 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204127_at </td> <td> 204127_at </td> <td> BC000149 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000149.2 /DEF=Homo sapiens, replication factor C (activator 1) 3 (38kD), clone MGC:5276, mRNA, complete cds.  /FEA=mRNA /PROD=replication factor C (activator 1) 3 (38kD) /DB_XREF=gi:12803002 /UG=Hs.115474 replication factor C (activator 1) 3 (38kD) /FL=gb:BC000149.2 gb:L07541.1 gb:NM_002915.1 </td> <td> BC000149 </td> <td> replication factor C (activator 1) 3, 38kDa </td> <td> RFC3 </td> <td> 5983 </td> <td> NM_002915 /// NM_181558 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0000731 // DNA synthesis involved in DNA repair // traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006260 // DNA replication // inferred from direct assay /// 0006260 // DNA replication // traceable author statement /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0046683 // response to organophosphorus // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005663 // DNA replication factor C complex // inferred from direct assay /// 0005663 // DNA replication factor C complex // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003689 // DNA clamp loader activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> 73.42 </td> <td> 82.16 </td> <td> 4.78 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209112_at </td> <td> 209112_at </td> <td> BC001971 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001971.1 /DEF=Homo sapiens, Similar to cyclin-dependent kinase inhibitor 1B (p27, Kip1), clone MGC:5304, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to cyclin-dependent kinase inhibitor 1B(p27, Kip1) /DB_XREF=gi:12805034 /UG=Hs.238990 cyclin-dependent kinase inhibitor 1B (p27, Kip1) /FL=gb:BC001971.1 gb:NM_004064.1 gb:U10906.1 gb:AF247551.1 gb:AY004255.1 </td> <td> BC001971 </td> <td> cyclin-dependent kinase inhibitor 1B (p27, Kip1) </td> <td> CDKN1B </td> <td> 1027 </td> <td> NM_004064 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009749 // response to glucose // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0031116 // positive regulation of microtubule polymerization // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0033673 // negative regulation of kinase activity // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043200 // response to amino acid // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0045736 // negative regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048102 // autophagic cell death // inferred from direct assay /// 0048839 // inner ear development // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051271 // negative regulation of cellular component movement // inferred from electronic annotation /// 0060770 // negative regulation of epithelial cell proliferation involved in prostate gland development // inferred from electronic annotation /// 0071236 // cellular response to antibiotic // inferred from electronic annotation /// 0071285 // cellular response to lithium ion // inferred from direct assay /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071850 // mitotic cell cycle arrest // inferred from direct assay /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0004860 // protein kinase inhibitor activity // inferred from electronic annotation /// 0004861 // cyclin-dependent protein serine/threonine kinase inhibitor activity // inferred from electronic annotation /// 0005072 // transforming growth factor beta receptor, cytoplasmic mediator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0030544 // Hsp70 protein binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation </td> <td> -108.82 </td> <td> 220.76 </td> <td> -4.78 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204094_s_at </td> <td> 204094_s_at </td> <td> NM_014779 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014779.1 /DEF=Homo sapiens KIAA0669 gene product (KIAA0669), mRNA. /FEA=mRNA /GEN=KIAA0669 /PROD=KIAA0669 gene product /DB_XREF=gi:7662235 /UG=Hs.52526 KIAA0669 gene product /FL=gb:AB014569.1 gb:NM_014779.1 </td> <td> NM_014779 </td> <td> TSC22 domain family, member 2 </td> <td> TSC22D2 </td> <td> 9819 </td> <td> NM_014779 /// XM_005247920 /// XR_427388 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation </td> <td>  </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation </td> <td> 83.00 </td> <td> 158.25 </td> <td> 4.78 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201145_at </td> <td> 201145_at </td> <td> NM_006118 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006118.2 /DEF=Homo sapiens HS1 binding protein (HAX1), mRNA. /FEA=mRNA /GEN=HAX1 /PROD=HS1 binding protein /DB_XREF=gi:13435355 /UG=Hs.15318 HS1 binding protein /FL=gb:NM_006118.2 gb:BC005240.1 gb:U68566.1 </td> <td> NM_006118 </td> <td> HCLS1 associated protein X-1 </td> <td> HAX1 </td> <td> 10456 </td> <td> NM_001018837 /// NM_006118 </td> <td> 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from mutant phenotype /// 0030833 // regulation of actin filament polymerization // inferred from mutant phenotype /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0051897 // positive regulation of protein kinase B signaling // inferred from mutant phenotype /// 0071345 // cellular response to cytokine stimulus // inferred from mutant phenotype /// 2000251 // positive regulation of actin cytoskeleton reorganization // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019966 // interleukin-1 binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from direct assay </td> <td> -131.80 </td> <td> 315.10 </td> <td> -4.77 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209609_s_at </td> <td> 209609_s_at </td> <td> BC004517 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004517.1 /DEF=Homo sapiens, Similar to RIKEN cDNA C330013D18 gene, clone MGC:11226, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to RIKEN cDNA C330013D18 gene /DB_XREF=gi:13325435 /UG=Hs.288936 Homo sapiens, Similar to RIKEN cDNA C330013D18 gene, clone MGC:11226, mRNA, complete cds /FL=gb:BC004517.1 </td> <td> BC004517 </td> <td> mitochondrial ribosomal protein L9 </td> <td> MRPL9 </td> <td> 65005 </td> <td> NM_031420 /// XM_005245455 </td> <td> 0006412 // translation // non-traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 65.18 </td> <td> 229.34 </td> <td> 4.77 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212138_at </td> <td> 212138_at </td> <td> AK021757 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK021757.1 /DEF=Homo sapiens cDNA FLJ11695 fis, clone HEMBA1005019, highly similar to Homo sapiens mRNA for KIAA0648 protein.  /FEA=mRNA /DB_XREF=gi:10433003 /UG=Hs.31921 KIAA0648 protein </td> <td> AK021757 </td> <td> PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) </td> <td> PDS5A </td> <td> 23244 </td> <td> NM_001100399 /// NM_001100400 /// NM_015200 /// XM_005262652 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // traceable author statement /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -83.00 </td> <td> 307.25 </td> <td> -4.77 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 214435_x_at </td> <td> 214435_x_at </td> <td> NM_005402 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_005402.1 /DEF=Homo sapiens v-ral simian leukemia viral oncogene homolog A (ras related) (RALA), mRNA.  /FEA=CDS /GEN=RALA /PROD=v-ral simian leukemia viral oncogene homolog A(ras related) /DB_XREF=gi:4885568 /UG=Hs.288757 v-ral simian leukemia viral oncogene homolog A (ras related) /FL=gb:M29893.1 gb:NM_005402.1 </td> <td> NM_005402 </td> <td> v-ral simian leukemia viral oncogene homolog A (ras related) </td> <td> RALA </td> <td> 5898 </td> <td> NM_005402 /// XM_006715762 /// XM_006715763 </td> <td> 0000910 // cytokinesis // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006935 // chemotaxis // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0017157 // regulation of exocytosis // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051491 // positive regulation of filopodium assembly // inferred from direct assay /// 0051665 // membrane raft localization // inferred from direct assay /// 0061024 // membrane organization // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0032154 // cleavage furrow // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0031755 // Edg-2 lysophosphatidic acid receptor binding // inferred from direct assay </td> <td> -238.48 </td> <td> 960.49 </td> <td> -4.77 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217916_s_at </td> <td> 217916_s_at </td> <td> NM_016623 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016623.1 /DEF=Homo sapiens hypothetical protein (BM-009), mRNA. /FEA=mRNA /GEN=BM-009 /PROD=hypothetical protein /DB_XREF=gi:7705303 /UG=Hs.92918 hypothetical protein /FL=gb:BC003599.1 gb:AF208851.1 gb:NM_016623.1 </td> <td> NM_016623 </td> <td> family with sequence similarity 49, member B </td> <td> FAM49B </td> <td> 51571 </td> <td> NM_001256763 /// NM_016623 /// NR_046359 /// NR_046360 /// NR_046361 /// XM_005250966 /// XM_006716582 /// XM_006716583 </td> <td>  </td> <td> 0005929 // cilium // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> 67.60 </td> <td> 213.32 </td> <td> 4.77 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212267_at </td> <td> 212267_at </td> <td> D87450 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D87450.1 /DEF=Human mRNA for KIAA0261 gene, partial cds. /FEA=mRNA /GEN=KIAA0261 /DB_XREF=gi:1665788 /UG=Hs.154978 KIAA0261 protein </td> <td> D87450 </td> <td> wings apart-like homolog (Drosophila) </td> <td> WAPAL </td> <td> 23063 </td> <td> NM_015045 /// XM_006717726 /// XM_006717727 /// XM_006717728 /// XM_006717729 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0035562 // negative regulation of chromatin binding // inferred from mutant phenotype /// 0045875 // negative regulation of sister chromatid cohesion // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0071168 // protein localization to chromatin // inferred from mutant phenotype /// 0071922 // regulation of cohesin localization to chromatin // inferred from mutant phenotype </td> <td> 0000775 // chromosome, centromeric region // traceable author statement /// 0000785 // chromatin // inferred from direct assay /// 0000795 // synaptonemal complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008278 // cohesin complex // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 52.20 </td> <td> 91.88 </td> <td> 4.77 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 215535_s_at </td> <td> 215535_s_at </td> <td> AF007145 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF007145.1 /DEF=Homo sapiens clone 23552 unknown mRNA, partial cds. /FEA=mRNA /PROD=unknown /DB_XREF=gi:2852622 /UG=Hs.240534 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) </td> <td> AF007145 </td> <td> 1-acylglycerol-3-phosphate O-acyltransferase 1 </td> <td> AGPAT1 </td> <td> 10554 </td> <td> NM_006411 /// NM_032741 /// XM_005248805 /// XM_005248806 /// XM_005272761 /// XM_005272762 /// XM_005274829 /// XM_005274830 /// XM_005275073 /// XM_005275074 /// XM_005275203 /// XM_005275204 /// XM_005275337 /// XM_005275338 /// XM_005275504 /// XM_005275505 </td> <td> 0001819 // positive regulation of cytokine production // inferred from mutant phenotype /// 0001961 // positive regulation of cytokine-mediated signaling pathway // inferred by curator /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006654 // phosphatidic acid biosynthetic process // inferred from genetic interaction /// 0006654 // phosphatidic acid biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0031325 // positive regulation of cellular metabolic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // inferred from genetic interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation </td> <td> 45.72 </td> <td> 136.49 </td> <td> 4.76 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213080_x_at </td> <td> 213080_x_at </td> <td> BF214492 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF214492 /FEA=EST /DB_XREF=gi:11108078 /DB_XREF=est:601845736F1 /CLONE=IMAGE:4076600 /UG=Hs.180946 ribosomal protein L5 </td> <td> BF214492 </td> <td> ribosomal protein L5 /// small nucleolar RNA, C/D box 21 </td> <td> RPL5 /// SNORD21 </td> <td> 6083 /// 6125 </td> <td> NM_000969 /// NR_000006 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042273 // ribosomal large subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008097 // 5S rRNA binding // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -388.15 </td> <td> 2259.40 </td> <td> -4.76 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 205282_at </td> <td> 205282_at </td> <td> NM_004631 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004631.1 /DEF=Homo sapiens low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (LRP8), mRNA.  /FEA=mRNA /GEN=LRP8 /PROD=low density lipoprotein receptor-related protein8, apolipoprotein e receptor /DB_XREF=gi:4758687 /UG=Hs.54481 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor /FL=gb:D50678.1 gb:NM_004631.1 </td> <td> NM_004631 </td> <td> low density lipoprotein receptor-related protein 8, apolipoprotein e receptor </td> <td> LRP8 </td> <td> 7804 </td> <td> NM_001018054 /// NM_004631 /// NM_017522 /// NM_033300 /// XM_005271173 /// XM_005271174 /// XM_005271175 /// XM_005271176 /// XM_006710881 /// XM_006710882 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001523 // retinoid metabolic process // traceable author statement /// 0006508 // proteolysis // non-traceable author statement /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006897 // endocytosis // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // non-traceable author statement /// 0021541 // ammon gyrus development // inferred from sequence or structural similarity /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021819 // layer formation in cerebral cortex // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0032793 // positive regulation of CREB transcription factor activity // inferred from sequence or structural similarity /// 0038026 // reelin-mediated signaling pathway // inferred from sequence or structural similarity /// 0042493 // response to drug // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050804 // regulation of synaptic transmission // inferred from sequence or structural similarity /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from sequence or structural similarity /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation /// 1900006 // positive regulation of dendrite development // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred by curator /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008035 // high-density lipoprotein particle binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from electronic annotation /// 0030229 // very-low-density lipoprotein particle receptor activity // inferred from direct assay /// 0034185 // apolipoprotein binding // inferred by curator /// 0038025 // reelin receptor activity // inferred from sequence or structural similarity </td> <td> 39.08 </td> <td> 49.91 </td> <td> 4.76 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 33768_at </td> <td> 33768_at </td> <td> L19267 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. L19267:Homo sapiens 59 protein mRNA, 3 end /cds=(0,1661) /gb=L19267 /gi=306711 /ug=Hs.198836 /len=2894 </td> <td> L19267 </td> <td> dystrophia myotonica, WD repeat containing </td> <td> DMWD </td> <td> 1762 </td> <td> NM_004943 </td> <td> 0007126 // meiotic nuclear division // non-traceable author statement </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 63.15 </td> <td> 199.03 </td> <td> 4.76 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203454_s_at </td> <td> 203454_s_at </td> <td> NM_004045 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004045.1 /DEF=Homo sapiens ATX1 (antioxidant protein 1, yeast) homolog 1 (ATOX1), mRNA.  /FEA=mRNA /GEN=ATOX1 /PROD=ATX1 (antioxidant protein 1, yeast) homolog 1 /DB_XREF=gi:4757803 /UG=Hs.279910 ATX1 (antioxidant protein 1, yeast) homolog 1 /FL=gb:NM_004045.1 </td> <td> NM_004045 </td> <td> antioxidant 1 copper chaperone </td> <td> ATOX1 </td> <td> 475 </td> <td> NM_004045 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006825 // copper ion transport // traceable author statement /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0005507 // copper ion binding // inferred from direct assay /// 0016530 // metallochaperone activity // traceable author statement /// 0016531 // copper chaperone activity // inferred from direct assay /// 0032767 // copper-dependent protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 45.85 </td> <td> 196.28 </td> <td> 4.76 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 221970_s_at </td> <td> 221970_s_at </td> <td> AU158148 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU158148 /FEA=EST /DB_XREF=gi:11019669 /DB_XREF=est:AU158148 /CLONE=PLACE1011221 /UG=Hs.321105 Homo sapiens cDNA: FLJ21737 fis, clone COLF3396 </td> <td> AU158148 </td> <td> nucleolar protein 11 </td> <td> NOL11 </td> <td> 25926 </td> <td> NM_015462 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0030490 // maturation of SSU-rRNA // inferred from mutant phenotype /// 1901838 // positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0034455 // t-UTP complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 65.58 </td> <td> 195.44 </td> <td> 4.76 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212780_at </td> <td> 212780_at </td> <td> AA700167 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA700167 /FEA=EST /DB_XREF=gi:2703130 /DB_XREF=est:zj36h12.s1 /CLONE=IMAGE:452423 /UG=Hs.326392 son of sevenless (Drosophila) homolog 1 /FL=gb:L13857.1 </td> <td> AA700167 </td> <td> son of sevenless homolog 1 (Drosophila) </td> <td> SOS1 </td> <td> 6654 </td> <td> NM_005633 /// XM_005264515 </td> <td> 0007165 // signal transduction // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0032318 // regulation of Ras GTPase activity // not recorded /// 0032318 // regulation of Ras GTPase activity // traceable author statement /// 0032319 // regulation of Rho GTPase activity // traceable author statement /// 0032320 // positive regulation of Ras GTPase activity //  /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045742 // positive regulation of epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051057 // positive regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // not recorded /// 0005088 // Ras guanyl-nucleotide exchange factor activity // traceable author statement /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -61.35 </td> <td> 129.05 </td> <td> -4.75 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203499_at </td> <td> 203499_at </td> <td> NM_004431 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004431.1 /DEF=Homo sapiens EphA2 (EPHA2), mRNA. /FEA=mRNA /GEN=EPHA2 /PROD=EphA2 /DB_XREF=gi:4758277 /UG=Hs.171596 EphA2 /FL=gb:M59371.1 gb:NM_004431.1 </td> <td> NM_004431 </td> <td> EPH receptor A2 </td> <td> EPHA2 </td> <td> 1969 </td> <td> NM_004431 /// XM_005245751 /// XM_005245752 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from direct assay /// 0010591 // regulation of lamellipodium assembly // inferred from mutant phenotype /// 0014028 // notochord formation // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from mutant phenotype /// 0030316 // osteoclast differentiation // inferred from sequence or structural similarity /// 0032863 // activation of Rac GTPase activity // inferred from mutant phenotype /// 0033598 // mammary gland epithelial cell proliferation // inferred from sequence or structural similarity /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0036342 // post-anal tail morphogenesis // inferred from electronic annotation /// 0043491 // protein kinase B signaling // inferred from direct assay /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from sequence or structural similarity /// 0045765 // regulation of angiogenesis // inferred from sequence or structural similarity /// 0046849 // bone remodeling // inferred from sequence or structural similarity /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048320 // axial mesoderm formation // inferred from electronic annotation /// 0048570 // notochord morphogenesis // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling // inferred from direct assay /// 0060035 // notochord cell development // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from mutant phenotype /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from sequence or structural similarity /// 0070309 // lens fiber cell morphogenesis // inferred from sequence or structural similarity /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070848 // response to growth factor // inferred from mutant phenotype /// 0090004 // positive regulation of establishment of protein localization to plasma membrane // inferred from mutant phenotype </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031256 // leading edge membrane // inferred from direct assay /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -125.62 </td> <td> 424.61 </td> <td> -4.75 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201397_at </td> <td> 201397_at </td> <td> NM_006623 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006623.1 /DEF=Homo sapiens phosphoglycerate dehydrogenase (PHGDH), mRNA. /FEA=mRNA /GEN=PHGDH /PROD=phosphoglycerate dehydrogenase /DB_XREF=gi:5729973 /UG=Hs.3343 phosphoglycerate dehydrogenase /FL=gb:BC000303.1 gb:BC001349.1 gb:AF006043.1 gb:NM_006623.1 gb:AF171237.1 </td> <td> NM_006623 </td> <td> phosphoglycerate dehydrogenase </td> <td> PHGDH </td> <td> 26227 </td> <td> NM_006623 </td> <td> 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0006544 // glycine metabolic process // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from electronic annotation /// 0006564 // L-serine biosynthetic process // traceable author statement /// 0006566 // threonine metabolic process // inferred from electronic annotation /// 0007420 // brain development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0009448 // gamma-aminobutyric acid metabolic process // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0019530 // taurine metabolic process // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021782 // glial cell development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0022402 // cell cycle process // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070314 // G1 to G0 transition // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004617 // phosphoglycerate dehydrogenase activity // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> -58.07 </td> <td> 69.09 </td> <td> -4.75 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 220615_s_at </td> <td> 220615_s_at </td> <td> NM_018099 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018099.1 /DEF=Homo sapiens hypothetical protein FLJ10462 (FLJ10462), mRNA. /FEA=mRNA /GEN=FLJ10462 /PROD=hypothetical protein FLJ10462 /DB_XREF=gi:8922433 /UG=Hs.100895 hypothetical protein FLJ10462 /FL=gb:AL136843.1 gb:NM_018099.1 </td> <td> NM_018099 </td> <td> fatty acyl CoA reductase 2 </td> <td> FAR2 </td> <td> 55711 </td> <td> NM_001271783 /// NM_001271784 /// NM_018099 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0008611 // ether lipid biosynthetic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0035336 // long-chain fatty-acyl-CoA metabolic process // inferred from direct assay /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005777 // peroxisome // inferred from sequence or structural similarity /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0003854 // 3-beta-hydroxy-delta5-steroid dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0050062 // long-chain-fatty-acyl-CoA reductase activity // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from electronic annotation /// 0080019 // fatty-acyl-CoA reductase (alcohol-forming) activity // inferred from direct assay </td> <td> 75.82 </td> <td> 229.81 </td> <td> 4.75 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204612_at </td> <td> 204612_at </td> <td> NM_006823 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006823.1 /DEF=Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor alpha (PKIA), mRNA.  /FEA=mRNA /GEN=PKIA /PROD=protein kinase, cAMP-dependent, catalytic,inhibitor alpha /DB_XREF=gi:5803126 /UG=Hs.75209 protein kinase (cAMP-dependent, catalytic) inhibitor alpha /FL=gb:NM_006823.1 </td> <td> NM_006823 </td> <td> protein kinase (cAMP-dependent, catalytic) inhibitor alpha </td> <td> PKIA </td> <td> 5569 </td> <td> NM_006823 /// NM_181839 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0010389 // regulation of G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042308 // negative regulation of protein import into nucleus // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from electronic annotation /// 2000480 // negative regulation of cAMP-dependent protein kinase activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004860 // protein kinase inhibitor activity // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // inferred from direct assay /// 0004862 // cAMP-dependent protein kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0034236 // protein kinase A catalytic subunit binding // inferred from physical interaction </td> <td> -113.45 </td> <td> 514.75 </td> <td> -4.75 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203940_s_at </td> <td> 203940_s_at </td> <td> NM_014909 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014909.1 /DEF=Homo sapiens KIAA1036 protein (KIAA1036), mRNA. /FEA=mRNA /GEN=KIAA1036 /PROD=KIAA1036 protein /DB_XREF=gi:7662453 /UG=Hs.155182 KIAA1036 protein /FL=gb:AB028959.1 gb:NM_014909.1 </td> <td> NM_014909 </td> <td> vasohibin 1 </td> <td> VASH1 </td> <td> 22846 </td> <td> NM_014909 /// XM_006720080 </td> <td> 0001525 // angiogenesis // inferred from direct assay /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0009611 // response to wounding // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from genetic interaction /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from genetic interaction /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 1901491 // negative regulation of lymphangiogenesis // inferred from genetic interaction /// 2000772 // regulation of cellular senescence // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0045177 // apical part of cell // inferred from direct assay </td> <td>  </td> <td> 53.30 </td> <td> 63.35 </td> <td> 4.75 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209849_s_at </td> <td> 209849_s_at </td> <td> AF029669 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF029669.1 /DEF=Homo sapiens Rad51C (RAD51C) mRNA, complete cds. /FEA=mRNA /GEN=RAD51C /PROD=Rad51C /DB_XREF=gi:2909800 /UG=Hs.11393 RAD51 (S. cerevisiae) homolog C /FL=gb:AF029669.1 </td> <td> AF029669 </td> <td> RAD51 paralog C </td> <td> RAD51C </td> <td> 5889 </td> <td> NM_002876 /// NM_058216 /// NR_103872 /// NR_103873 /// XM_006722001 /// XM_006722002 /// XM_006722003 /// XM_006722004 /// XM_006722005 /// XM_006722006 </td> <td> 0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0000737 // DNA catabolic process, endonucleolytic // inferred from electronic annotation /// 0000737 // DNA catabolic process, endonucleolytic // inferred from mutant phenotype /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006281 // DNA repair // inferred from direct assay /// 0006310 // DNA recombination // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007062 // sister chromatid cohesion // inferred from sequence or structural similarity /// 0007066 // female meiosis sister chromatid cohesion // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // inferred from electronic annotation /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0010971 // positive regulation of G2/M transition of mitotic cell cycle // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0033063 // Rad51B-Rad51C-Rad51D-XRCC2 complex // inferred from direct assay /// 0033065 // Rad51C-XRCC3 complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048476 // Holliday junction resolvase complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000400 // four-way junction DNA binding // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // inferred from electronic annotation /// 0008821 // crossover junction endodeoxyribonuclease activity // inferred from mutant phenotype /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> 60.95 </td> <td> 106.38 </td> <td> 4.74 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 211302_s_at </td> <td> 211302_s_at </td> <td> L20966 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L20966.1 /DEF=Human phosphodiesterase mRNA, complete cds. /FEA=mRNA /PROD=phosphodiesterase /DB_XREF=gi:347121 /UG=Hs.188 phosphodiesterase 4B, cAMP-specific (dunce (Drosophila)-homolog phosphodiesterase E4) /FL=gb:L20966.1 </td> <td> L20966 </td> <td> phosphodiesterase 4B, cAMP-specific </td> <td> PDE4B </td> <td> 5142 </td> <td> NM_001037339 /// NM_001037340 /// NM_001037341 /// NM_001297440 /// NM_001297441 /// NM_001297442 /// NM_002600 /// XM_005270923 /// XM_005270924 /// XM_005270925 /// XM_005270926 /// XM_006710680 </td> <td> 0001780 // neutrophil homeostasis // inferred from sequence or structural similarity /// 0006198 // cAMP catabolic process // inferred from direct assay /// 0006198 // cAMP catabolic process // inferred from electronic annotation /// 0006198 // cAMP catabolic process // inferred from genetic interaction /// 0007165 // signal transduction // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0030593 // neutrophil chemotaxis // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from mutant phenotype /// 0032743 // positive regulation of interleukin-2 production // inferred from mutant phenotype /// 0035690 // cellular response to drug // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // inferred from mutant phenotype /// 0050900 // leukocyte migration // inferred from sequence or structural similarity /// 0071222 // cellular response to lipopolysaccharide // inferred from sequence or structural similarity /// 0071872 // cellular response to epinephrine stimulus // inferred from sequence or structural similarity /// 0086004 // regulation of cardiac muscle cell contraction // inferred from sequence or structural similarity /// 1901841 // regulation of high voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 1901898 // negative regulation of relaxation of cardiac muscle // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005891 // voltage-gated calcium channel complex // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from sequence or structural similarity /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from direct assay /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from genetic interaction /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from genetic interaction /// 0044325 // ion channel binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -150.27 </td> <td> 355.39 </td> <td> -4.74 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 206765_at </td> <td> 206765_at </td> <td> AF153820 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF153820.1 /DEF=Homo sapiens inwardly-rectifying potassium channel Kir2.1 (KCNJ2) mRNA, complete cds.  /FEA=mRNA /GEN=KCNJ2 /PROD=inwardly-rectifying potassium channel Kir2.1 /DB_XREF=gi:8132296 /UG=Hs.1547 potassium inwardly-rectifying channel, subfamily J, member 2 /FL=gb:AF011904.1 gb:AF021139.1 gb:NM_000891.1 gb:U16861.1 gb:U12507.1 gb:U22413.1 gb:AF153820.1 gb:U24055.1 </td> <td> AF153820 </td> <td> potassium inwardly-rectifying channel, subfamily J, member 2 </td> <td> KCNJ2 </td> <td> 3759 </td> <td> NM_000891 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0010107 // potassium ion import // inferred from direct assay /// 0014861 // regulation of skeletal muscle contraction via regulation of action potential // inferred from mutant phenotype /// 0015693 // magnesium ion transport // inferred from electronic annotation /// 0030007 // cellular potassium ion homeostasis // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from direct assay /// 0055119 // relaxation of cardiac muscle // inferred from mutant phenotype /// 0060075 // regulation of resting membrane potential // traceable author statement /// 0060306 // regulation of membrane repolarization // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from direct assay /// 0086001 // cardiac muscle cell action potential // inferred from electronic annotation /// 0086002 // cardiac muscle cell action potential involved in contraction // inferred from mutant phenotype /// 0086004 // regulation of cardiac muscle cell contraction // inferred from electronic annotation /// 0086011 // membrane repolarization during action potential // inferred from mutant phenotype /// 0086012 // membrane depolarization during cardiac muscle cell action potential // traceable author statement /// 0086013 // membrane repolarization during cardiac muscle cell action potential // inferred from mutant phenotype /// 0086013 // membrane repolarization during cardiac muscle cell action potential // traceable author statement /// 0086091 // regulation of heart rate by cardiac conduction // inferred from mutant phenotype /// 0090076 // relaxation of skeletal muscle // inferred from mutant phenotype /// 1901381 // positive regulation of potassium ion transmembrane transport // inferred from electronic annotation </td> <td> 0005790 // smooth endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0008076 // voltage-gated potassium channel complex // inferred from direct assay /// 0014704 // intercalated disc // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031224 // intrinsic component of membrane // inferred from direct assay /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation </td> <td> 0005242 // inward rectifier potassium channel activity // inferred from direct assay /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from electronic annotation /// 0086008 // voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization // inferred from mutant phenotype </td> <td> -51.60 </td> <td> 100.60 </td> <td> -4.74 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202759_s_at </td> <td> 202759_s_at </td> <td> BE879367 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE879367 /FEA=EST /DB_XREF=gi:10328143 /DB_XREF=est:601484628F1 /CLONE=IMAGE:3887262 /UG=Hs.42322 A kinase (PRKA) anchor protein 2 /FL=gb:AB023137.1 gb:NM_007203.1 </td> <td> BE879367 </td> <td> A kinase (PRKA) anchor protein 2 /// PALM2-AKAP2 readthrough </td> <td> AKAP2 /// PALM2-AKAP2 </td> <td> 11217 /// 445815 </td> <td> NM_001004065 /// NM_001136562 /// NM_001198656 /// NM_007203 /// NM_147150 </td> <td> 0008360 // regulation of cell shape // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0016301 // kinase activity // inferred from electronic annotation /// 0019899 // enzyme binding // non-traceable author statement </td> <td> -424.67 </td> <td> 1264.76 </td> <td> -4.74 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 214329_x_at </td> <td> 214329_x_at </td> <td> AW474434 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW474434 /FEA=EST /DB_XREF=gi:7044540 /DB_XREF=est:xs95h07.x1 /CLONE=IMAGE:2777437 /UG=Hs.301527 ESTs, Moderately similar to unknown H.sapiens </td> <td> AW474434 </td> <td> tumor necrosis factor (ligand) superfamily, member 10 </td> <td> TNFSF10 </td> <td> 8743 </td> <td> NM_001190942 /// NM_001190943 /// NM_003810 /// NR_033994 </td> <td> 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0097190 // apoptotic signaling pathway // traceable author statement /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from direct assay /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032813 // tumor necrosis factor receptor superfamily binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -58.60 </td> <td> 60.80 </td> <td> -4.74 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201803_at </td> <td> 201803_at </td> <td> NM_000938 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000938.1 /DEF=Homo sapiens polymerase (RNA) II (DNA directed) polypeptide B (140kD) (POLR2B), mRNA.  /FEA=mRNA /GEN=POLR2B /PROD=polymerase (RNA) II (DNA directed) polypeptide B(140kD) /DB_XREF=gi:4505940 /UG=Hs.296014 polymerase (RNA) II (DNA directed) polypeptide B (140kD) /FL=gb:NM_000938.1 </td> <td> NM_000938 </td> <td> polymerase (RNA) II (DNA directed) polypeptide B, 140kDa </td> <td> POLR2B </td> <td> 5431 </td> <td> NM_000938 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0001055 // RNA polymerase II activity // not recorded /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0032549 // ribonucleoside binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 121.55 </td> <td> 570.80 </td> <td> 4.74 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 218265_at </td> <td> 218265_at </td> <td> NM_024077 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024077.1 /DEF=Homo sapiens hypothetical protein MGC3156 (MGC3156), mRNA. /FEA=mRNA /GEN=MGC3156 /PROD=hypothetical protein MGC3156 /DB_XREF=gi:13129065 /UG=Hs.288141 hypothetical protein MGC3156 /FL=gb:AL136881.1 gb:NM_024077.1 </td> <td> NM_024077 </td> <td> SECIS binding protein 2 </td> <td> SECISBP2 </td> <td> 79048 </td> <td> NM_001282688 /// NM_001282689 /// NM_001282690 /// NM_024077 /// XM_005252193 /// XM_005252195 /// XM_005252196 /// XM_005252198 /// XM_005252202 /// XM_006717282 /// XR_428537 </td> <td> 0006412 // translation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0035368 // selenocysteine insertion sequence binding // inferred from electronic annotation /// 0043021 // ribonucleoprotein complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 39.88 </td> <td> 37.74 </td> <td> 4.74 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 219192_at </td> <td> 219192_at </td> <td> NM_018449 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018449.1 /DEF=Homo sapiens AD-012 protein (LOC55833), mRNA. /FEA=mRNA /GEN=LOC55833 /PROD=AD-012 protein /DB_XREF=gi:8923858 /UG=Hs.14953 AD-012 protein /FL=gb:AF157327.1 gb:NM_018449.1 </td> <td> NM_018449 </td> <td> ubiquitin associated protein 2 </td> <td> UBAP2 </td> <td> 55833 </td> <td> NM_001282529 /// NM_001282530 /// NM_018449 /// NM_020867 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 48.92 </td> <td> 128.44 </td> <td> 4.74 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 210612_s_at </td> <td> 210612_s_at </td> <td> AF318616 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF318616.1 /DEF=Homo sapiens synaptojanin 2 mRNA, complete cds. /FEA=mRNA /PROD=synaptojanin 2 /DB_XREF=gi:12034891 /UG=Hs.61289 synaptojanin 2 /FL=gb:AF318616.1 </td> <td> AF318616 </td> <td> synaptojanin 2 </td> <td> SYNJ2 </td> <td> 8871 </td> <td> NM_001178088 /// NM_003898 /// XM_005267197 /// XM_005267198 /// XM_005267199 /// XM_005267200 /// XM_006715591 /// XM_006715592 /// XR_245556 </td> <td> 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046856 // phosphatidylinositol dephosphorylation // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004439 // phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042578 // phosphoric ester hydrolase activity // inferred from electronic annotation </td> <td> -130.52 </td> <td> 199.06 </td> <td> -4.73 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 211919_s_at </td> <td> 211919_s_at </td> <td> AF348491 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF348491.1 /DEF=Homo sapiens chemokine receptor CXCR4 mRNA, complete cds. /FEA=CDS /PROD=chemokine receptor CXCR4 /DB_XREF=gi:13549089 /FL=gb:AF348491.1 </td> <td> AF348491 </td> <td> chemokine (C-X-C motif) receptor 4 </td> <td> CXCR4 </td> <td> 7852 </td> <td> NM_001008540 /// NM_003467 </td> <td> 0000187 // activation of MAPK activity // traceable author statement /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from expression pattern /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0002407 // dendritic cell chemotaxis // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007204 // positive regulation of cytosolic calcium ion concentration // traceable author statement /// 0007281 // germ cell development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008045 // motor neuron axon guidance // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from mutant phenotype /// 0030260 // entry into host cell // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0043217 // myelin maintenance // inferred from sequence or structural similarity /// 0048699 // generation of neurons // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0061351 // neural precursor cell proliferation // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // non-traceable author statement /// 0071345 // cellular response to cytokine stimulus // inferred from direct assay </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005764 // lysosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004950 // chemokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement /// 0016494 // C-X-C chemokine receptor activity // non-traceable author statement /// 0019955 // cytokine binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032027 // myosin light chain binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay </td> <td> -139.08 </td> <td> 444.34 </td> <td> -4.73 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 219405_at </td> <td> 219405_at </td> <td> NM_018073 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018073.1 /DEF=Homo sapiens hypothetical protein FLJ10369 (FLJ10369), mRNA. /FEA=mRNA /GEN=FLJ10369 /PROD=hypothetical protein FLJ10369 /DB_XREF=gi:8922379 /UG=Hs.53940 hypothetical protein FLJ10369 /FL=gb:NM_018073.1 </td> <td> NM_018073 </td> <td> tripartite motif containing 68 </td> <td> TRIM68 </td> <td> 55128 </td> <td> NM_018073 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0060765 // regulation of androgen receptor signaling pathway // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from physical interaction </td> <td> 38.13 </td> <td> 48.86 </td> <td> 4.73 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209493_at </td> <td> 209493_at </td> <td> AF338650 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF338650.1 /DEF=Homo sapiens PDZ domain-containing protein AIPC (AIPC) mRNA, complete cds.  /FEA=mRNA /GEN=AIPC /PROD=PDZ domain-containing protein AIPC /DB_XREF=gi:12751451 /UG=Hs.173035 KIAA0300 protein /FL=gb:AF338650.1 </td> <td> AF338650 </td> <td> PDZ domain containing 2 </td> <td> PDZD2 </td> <td> 23037 </td> <td> NM_015022 /// NM_178140 /// XM_005248269 /// XM_005248270 /// XM_005248271 /// XM_005248272 /// XM_006714456 /// XM_006714457 /// XM_006714458 /// XM_006714459 /// XM_006714460 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -45.03 </td> <td> 36.41 </td> <td> -4.73 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204004_at </td> <td> 204004_at </td> <td> AI336206 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI336206 /FEA=EST /DB_XREF=gi:4073133 /DB_XREF=est:qt44e12.x1 /CLONE=IMAGE:1950862 /UG=Hs.176090 PRKC, apoptosis, WT1, regulator /FL=gb:U63809.1 gb:NM_002583.1 </td> <td> AI336206 </td> <td> PRKC, apoptosis, WT1, regulator </td> <td> PAWR </td> <td> 5074 </td> <td> NM_002583 /// XM_006719435 /// XM_006719436 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0030889 // negative regulation of B cell proliferation // inferred from electronic annotation /// 0042094 // interleukin-2 biosynthetic process // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation /// 0042986 // positive regulation of amyloid precursor protein biosynthetic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // non-traceable author statement /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from sequence or structural similarity /// 0097190 // apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005884 // actin filament // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // traceable author statement /// 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from direct assay /// 0043522 // leucine zipper domain binding // inferred from physical interaction </td> <td> 104.35 </td> <td> 257.77 </td> <td> 4.73 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213581_at </td> <td> 213581_at </td> <td> BF446180 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF446180 /FEA=EST /DB_XREF=gi:11511318 /DB_XREF=est:7p33e08.x1 /CLONE=IMAGE:3647703 /UG=Hs.41639 programmed cell death 2 </td> <td> BF446180 </td> <td> programmed cell death 2 </td> <td> PDCD2 </td> <td> 5134 </td> <td> NM_001199461 /// NM_001199462 /// NM_001199463 /// NM_001199464 /// NM_002598 /// NM_144781 /// XM_006715498 /// XR_427972 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0012501 // programmed cell death // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 44.97 </td> <td> 77.44 </td> <td> 4.73 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 218032_at </td> <td> 218032_at </td> <td> AF070673 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF070673.1 /DEF=Homo sapiens stannin mRNA, complete cds. /FEA=mRNA /PROD=stannin /DB_XREF=gi:3978241 /UG=Hs.76691 stannin /FL=gb:AF030196.1 gb:AF070673.1 gb:NM_003498.1 gb:AL161976.1 </td> <td> AF070673 </td> <td> stannin </td> <td> SNN </td> <td> 8303 </td> <td> NM_003498 </td> <td> 0006950 // response to stress // traceable author statement /// 0009628 // response to abiotic stimulus // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 64.43 </td> <td> 127.81 </td> <td> 4.72 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213198_at </td> <td> 213198_at </td> <td> AL117643 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL117643.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434M245 (from clone DKFZp434M245). /FEA=mRNA /DB_XREF=gi:5912233 /UG=Hs.5288 Homo sapiens mRNA; cDNA DKFZp434M245 (from clone DKFZp434M245) </td> <td> AL117643 </td> <td> activin A receptor, type IB </td> <td> ACVR1B </td> <td> 91 </td> <td> NM_004302 /// NM_020327 /// NM_020328 /// XM_006719685 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007165 // signal transduction // inferred from direct assay /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0032924 // activin receptor signaling pathway // inferred from direct assay /// 0032924 // activin receptor signaling pathway // inferred from mutant phenotype /// 0032927 // positive regulation of activin receptor signaling pathway // inferred from direct assay /// 0038092 // nodal signaling pathway // inferred from genetic interaction /// 0045648 // positive regulation of erythrocyte differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046545 // development of primary female sexual characteristics // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0097191 // extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 1901165 // positive regulation of trophoblast cell migration // inferred from direct assay </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // non-traceable author statement /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016361 // activin receptor activity, type I // inferred from direct assay /// 0016361 // activin receptor activity, type I // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017002 // activin-activated receptor activity // inferred from direct assay /// 0019838 // growth factor binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // non-traceable author statement /// 0034711 // inhibin binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048185 // activin binding // inferred from direct assay </td> <td> -91.55 </td> <td> 248.92 </td> <td> -4.72 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209344_at </td> <td> 209344_at </td> <td> BC002827 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002827.1 /DEF=Homo sapiens, tropomyosin 4, clone MGC:3641, mRNA, complete cds. /FEA=mRNA /PROD=tropomyosin 4 /DB_XREF=gi:12803958 /UG=Hs.250641 tropomyosin 4 /FL=gb:BC002827.1 gb:NM_003290.1 </td> <td> BC002827 </td> <td> tropomyosin 4 </td> <td> TPM4 </td> <td> 7171 </td> <td> NM_001145160 /// NM_003290 /// XM_005260042 /// XM_006722865 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0030049 // muscle filament sliding // traceable author statement </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0002102 // podosome // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005862 // muscle thin filament tropomyosin // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0008307 // structural constituent of muscle // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 174.58 </td> <td> 409.29 </td> <td> 4.72 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 216231_s_at </td> <td> 216231_s_at </td> <td> AW188940 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW188940 /FEA=EST /DB_XREF=gi:6463376 /DB_XREF=est:xk90f09.x1 /CLONE=IMAGE:2674025 /UG=Hs.75415 beta-2-microglobulin </td> <td> AW188940 </td> <td> beta-2-microglobulin </td> <td> B2M </td> <td> 567 </td> <td> NM_004048 /// XM_005254549 /// XM_006725182 </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002237 // response to molecule of bacterial origin // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002481 // antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0042026 // protein refolding // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0031905 // early endosome lumen // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -532.82 </td> <td> 2350.81 </td> <td> -4.72 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202442_at </td> <td> 202442_at </td> <td> NM_001284 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001284.1 /DEF=Homo sapiens adaptor-related protein complex 3, sigma 1 subunit (AP3S1), mRNA.  /FEA=mRNA /GEN=AP3S1 /PROD=adaptor-related protein complex 3, sigma 1subunit /DB_XREF=gi:4502860 /UG=Hs.80917 adaptor-related protein complex 3, sigma 1 subunit /FL=gb:BC000804.1 gb:D63643.1 gb:U91932.1 gb:NM_001284.1 </td> <td> NM_001284 </td> <td> adaptor-related protein complex 3, sigma 1 subunit </td> <td> AP3S1 </td> <td> 1176 </td> <td> NM_001002924 /// NM_001284 /// XM_005271872 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0008089 // anterograde axon cargo transport // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0048490 // anterograde synaptic vesicle transport // inferred from sequence or structural similarity </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030119 // AP-type membrane coat adaptor complex // traceable author statement /// 0030123 // AP-3 adaptor complex // inferred from direct assay /// 0030133 // transport vesicle // traceable author statement /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> 215.67 </td> <td> 715.46 </td> <td> 4.72 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 210983_s_at </td> <td> 210983_s_at </td> <td> AF279900 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF279900.1 /DEF=Homo sapiens PNAS-146 mRNA, complete cds. /FEA=mRNA /PROD=PNAS-146 /DB_XREF=gi:12751125 /UG=Hs.77152 minichromosome maintenance deficient (S. cerevisiae) 7 /FL=gb:AF279900.1 </td> <td> AF279900 </td> <td> minichromosome maintenance complex component 7 </td> <td> MCM7 </td> <td> 4176 </td> <td> NM_001278595 /// NM_005916 /// NM_182776 /// XM_005250348 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006268 // DNA unwinding involved in DNA replication // inferred from electronic annotation /// 0006270 // DNA replication initiation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0015979 // photosynthesis // inferred from electronic annotation /// 0015995 // chlorophyll biosynthetic process // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation </td> <td> 0000785 // chromatin // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0042555 // MCM complex // inferred from direct assay /// 0042555 // MCM complex // inferred from mutant phenotype </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016851 // magnesium chelatase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> -106.52 </td> <td> 260.59 </td> <td> -4.72 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 218101_s_at </td> <td> 218101_s_at </td> <td> NM_004549 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004549.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2 (14.5kD, B14.5b) (NDUFC2), mRNA.  /FEA=mRNA /GEN=NDUFC2 /PROD=NADH dehydrogenase (ubiquinone) 1, subcomplexunknown, 2 (14.5kD, B14.5b) /DB_XREF=gi:4758783 /UG=Hs.193313 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2 (14.5kD, B14.5b) /FL=gb:AF087659.1 gb:AF070652.1 gb:NM_004549.1 </td> <td> NM_004549 </td> <td> NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa /// NDUFC2-KCTD14 readthrough </td> <td> NDUFC2 /// NDUFC2-KCTD14 </td> <td> 4718 /// 100532726 </td> <td> NM_001203260 /// NM_001203261 /// NM_001203262 /// NM_001204054 /// NM_001204055 /// NM_004549 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation </td> <td> 196.82 </td> <td> 823.76 </td> <td> 4.72 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212418_at </td> <td> 212418_at </td> <td> M82882 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:M82882.1 /DEF=Human cis-acting sequence. /FEA=mRNA /DB_XREF=gi:180551 /UG=Hs.154365 E74-like factor 1 (ets domain transcription factor) </td> <td> M82882 </td> <td> E74-like factor 1 (ets domain transcription factor) </td> <td> ELF1 </td> <td> 1997 </td> <td> NM_001145353 /// NM_172373 /// XM_005266276 /// XM_005266277 </td> <td> 0001817 // regulation of cytokine production // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0030154 // cell differentiation // not recorded /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -86.42 </td> <td> 127.11 </td> <td> -4.71 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202297_s_at </td> <td> 202297_s_at </td> <td> AF157324 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF157324.1 /DEF=Homo sapiens RER1 protein (RER1) mRNA, complete cds. /FEA=mRNA /GEN=RER1 /PROD=RER1 protein /DB_XREF=gi:7688698 /UG=Hs.40500 similar to S. cerevisiae RER1 /FL=gb:BC004965.1 gb:NM_007033.1 gb:AF157324.1 </td> <td> AF157324 </td> <td> retention in endoplasmic reticulum sorting receptor 1 </td> <td> RER1 </td> <td> 11079 </td> <td> NM_007033 /// XM_005244713 /// XM_006710305 /// XM_006710306 /// XM_006710307 </td> <td> 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030173 // integral component of Golgi membrane // inferred from direct assay </td> <td>  </td> <td> 60.85 </td> <td> 161.62 </td> <td> 4.70 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202906_s_at </td> <td> 202906_s_at </td> <td> AF049895 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF049895 /DEF=Homo sapiens 8q21.3: Nibrin (NBS1), 2,4-dienoyl-CoA reductase (DECR), and calbindin 1 (CALB1) genes /FEA=mRNA_5 /DB_XREF=gi:4126312 /UG=Hs.25812 Nijmegen breakage syndrome 1 (nibrin) /FL=gb:AF058696.1 gb:AF051334.1 gb:NM_002485.2 </td> <td> AF049895 </td> <td> nibrin </td> <td> NBN </td> <td> 4683 </td> <td> NM_001024688 /// NM_002485 /// XM_005250923 /// XR_242390 /// XR_242391 </td> <td> 0000075 // cell cycle checkpoint // inferred from electronic annotation /// 0000077 // DNA damage checkpoint // inferred from direct assay /// 0000723 // telomere maintenance // inferred from mutant phenotype /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001832 // blastocyst growth // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006302 // double-strand break repair // inferred from direct assay /// 0006302 // double-strand break repair // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007093 // mitotic cell cycle checkpoint // inferred from direct assay /// 0007095 // mitotic G2 DNA damage checkpoint // inferred from direct assay /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0030174 // regulation of DNA-dependent DNA replication initiation // traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // traceable author statement /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from mutant phenotype /// 0033674 // positive regulation of kinase activity // inferred from direct assay /// 0045190 // isotype switching // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0097193 // intrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0000784 // nuclear chromosome, telomeric region // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0030870 // Mre11 complex // inferred from direct assay /// 0035861 // site of double-strand break // inferred from direct assay /// 0042405 // nuclear inclusion body // inferred from direct assay </td> <td> 0003684 // damaged DNA binding // inferred by curator /// 0004003 // ATP-dependent DNA helicase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -55.33 </td> <td> 81.94 </td> <td> -4.70 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201458_s_at </td> <td> 201458_s_at </td> <td> NM_004725 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004725.1 /DEF=Homo sapiens BUB3 (budding uninhibited by benzimidazoles 3, yeast) homolog (BUB3), mRNA.  /FEA=mRNA /GEN=BUB3 /PROD=BUB3 (budding uninhibited by benzimidazoles 3,yeast) homolog /DB_XREF=gi:4757879 /UG=Hs.40323 BUB3 (budding uninhibited by benzimidazoles 3, yeast) homolog /FL=gb:BC005138.1 gb:AF047472.1 gb:AF053304.1 gb:AF081496.1 gb:NM_004725.1 </td> <td> NM_004725 </td> <td> BUB3 mitotic checkpoint protein </td> <td> BUB3 </td> <td> 9184 </td> <td> NM_001007793 /// NM_004725 </td> <td> 0000070 // mitotic sister chromatid segregation // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0008608 // attachment of spindle microtubules to kinetochore // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051983 // regulation of chromosome segregation // inferred from electronic annotation /// 0071173 // spindle assembly checkpoint // inferred from direct assay </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 156.55 </td> <td> 298.43 </td> <td> 4.70 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212810_s_at </td> <td> 212810_s_at </td> <td> W72527 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W72527 /FEA=EST /DB_XREF=gi:1382184 /DB_XREF=est:zd63a09.s1 /CLONE=IMAGE:345304 /UG=Hs.286049 phosphoserine aminotransferase </td> <td> W72527 </td> <td> solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 </td> <td> SLC1A4 </td> <td> 6509 </td> <td> NM_001135581 /// NM_001193493 /// NM_003038 /// XM_006712079 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006821 // chloride transport // inferred from direct assay /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0006868 // glutamine transport // traceable author statement /// 0015808 // L-alanine transport // inferred from direct assay /// 0015811 // L-cystine transport // inferred from direct assay /// 0015824 // proline transport // inferred from direct assay /// 0015825 // L-serine transport // inferred from direct assay /// 0015826 // threonine transport // inferred from direct assay /// 0034589 // hydroxyproline transport // inferred from direct assay /// 0035249 // synaptic transmission, glutamatergic // non-traceable author statement /// 0035524 // proline transmembrane transport // inferred from direct assay /// 0050890 // cognition // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement /// 1902476 // chloride transmembrane transport // inferred from direct assay </td> <td> 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005882 // intermediate filament // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred by curator /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005254 // chloride channel activity // inferred from direct assay /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015180 // L-alanine transmembrane transporter activity // inferred from direct assay /// 0015184 // L-cystine transmembrane transporter activity // inferred from direct assay /// 0015186 // L-glutamine transmembrane transporter activity // traceable author statement /// 0015193 // L-proline transmembrane transporter activity // inferred from direct assay /// 0015194 // L-serine transmembrane transporter activity // inferred from direct assay /// 0015195 // L-threonine transmembrane transporter activity // inferred from direct assay /// 0015293 // symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation /// 0034590 // L-hydroxyproline transmembrane transporter activity // inferred from direct assay </td> <td> -41.12 </td> <td> 55.59 </td> <td> -4.70 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202530_at </td> <td> 202530_at </td> <td> NM_001315 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001315.1 /DEF=Homo sapiens mitogen-activated protein kinase 14 (MAPK14), mRNA. /FEA=mRNA /GEN=MAPK14 /PROD=mitogen-activated protein kinase 14 /DB_XREF=gi:4503068 /UG=Hs.79107 mitogen-activated protein kinase 14 /FL=gb:NM_001315.1 gb:L35263.1 </td> <td> NM_001315 </td> <td> mitogen-activated protein kinase 14 </td> <td> MAPK14 </td> <td> 1432 </td> <td> NM_001315 /// NM_139012 /// NM_139013 /// NM_139014 /// XM_006714998 </td> <td> 0000077 // DNA damage checkpoint // inferred from electronic annotation /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000187 // activation of MAPK activity // traceable author statement /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001502 // cartilage condensation // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010831 // positive regulation of myotube differentiation // inferred from sequence or structural similarity /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0019395 // fatty acid oxidation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030316 // osteoclast differentiation // inferred from sequence or structural similarity /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0038066 // p38MAPK cascade // inferred from sequence or structural similarity /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042307 // positive regulation of protein import into nucleus // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0042770 // signal transduction in response to DNA damage // inferred from mutant phenotype /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045648 // positive regulation of erythrocyte differentiation // inferred from electronic annotation /// 0045663 // positive regulation of myoblast differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070935 // 3'-UTR-mediated mRNA stabilization // traceable author statement /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from electronic annotation /// 0090400 // stress-induced premature senescence // inferred from mutant phenotype /// 1901741 // positive regulation of myoblast fusion // inferred from sequence or structural similarity /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005623 // cell // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004707 // MAP kinase activity // inferred from direct assay /// 0004708 // MAP kinase kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0051525 // NFAT protein binding // inferred from sequence or structural similarity </td> <td> 62.93 </td> <td> 101.16 </td> <td> 4.70 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209479_at </td> <td> 209479_at </td> <td> BC000758 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000758.1 /DEF=Homo sapiens, clone MGC:2698, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:2698) /DB_XREF=gi:12653928 /UG=Hs.44468 DKFZP586D0623 protein /FL=gb:BC000758.1 </td> <td> BC000758 </td> <td> coiled-coil domain containing 28A </td> <td> CCDC28A </td> <td> 25901 </td> <td> NM_015439 </td> <td>  </td> <td>  </td> <td>  </td> <td> -50.20 </td> <td> 101.53 </td> <td> -4.69 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 215195_at </td> <td> 215195_at </td> <td> AF035594 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF035594.1 /DEF=Homo sapiens protein kinase C-alpha mRNA, partial 3 UTR. /FEA=mRNA /DB_XREF=gi:3168857 /UG=Hs.279856 Homo sapiens protein kinase C-alpha mRNA, partial 3 UTR </td> <td> AF035594 </td> <td> protein kinase C, alpha </td> <td> PRKCA </td> <td> 5578 </td> <td> NM_002737 /// XM_006721972 /// XR_243672 /// XR_243673 </td> <td> 0000188 // inactivation of MAPK activity // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0002159 // desmosome assembly // inferred from mutant phenotype /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007190 // activation of adenylate cyclase activity // inferred from sequence or structural similarity /// 0007194 // negative regulation of adenylate cyclase activity // inferred from sequence or structural similarity /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from sequence or structural similarity /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0031666 // positive regulation of lipopolysaccharide-mediated signaling pathway // inferred from mutant phenotype /// 0034351 // negative regulation of glial cell apoptotic process // inferred from mutant phenotype /// 0035408 // histone H3-T6 phosphorylation // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0036289 // peptidyl-serine autophosphorylation // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045651 // positive regulation of macrophage differentiation // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045785 // positive regulation of cell adhesion // inferred from mutant phenotype /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0046325 // negative regulation of glucose import // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070555 // response to interleukin-1 // inferred from mutant phenotype /// 0071322 // cellular response to carbohydrate stimulus // inferred from electronic annotation /// 0090330 // regulation of platelet aggregation // inferred from direct assay /// 0097190 // apoptotic signaling pathway // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // inferred from electronic annotation /// 2000707 // positive regulation of dense core granule biogenesis // inferred from sequence or structural similarity </td> <td> 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from sequence or structural similarity /// 0004698 // calcium-dependent protein kinase C activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from direct assay /// 0035403 // histone kinase activity (H3-T6 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -49.10 </td> <td> 43.85 </td> <td> -4.69 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212185_x_at </td> <td> 212185_x_at </td> <td> NM_005953 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_005953.1 /DEF=Homo sapiens metallothionein 2A (MT2A), mRNA. /FEA=CDS /GEN=MT2A /PROD=metallothionein 2A /DB_XREF=gi:5174763 /UG=Hs.118786 metallothionein 2A /FL=gb:NM_005953.1 </td> <td> NM_005953 </td> <td> metallothionein 2A </td> <td> MT2A </td> <td> 4502 </td> <td> NM_005953 </td> <td> 0006878 // cellular copper ion homeostasis // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0035690 // cellular response to drug // inferred from direct assay /// 0036016 // cellular response to interleukin-3 // inferred from expression pattern /// 0036018 // cellular response to erythropoietin // inferred from expression pattern /// 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0071294 // cellular response to zinc ion // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -2595.70 </td> <td> 5236.95 </td> <td> -4.69 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213154_s_at </td> <td> 213154_s_at </td> <td> AI934125 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI934125 /FEA=EST /DB_XREF=gi:5672995 /DB_XREF=est:wn97c08.x1 /CLONE=IMAGE:2453774 /UG=Hs.17411 KIAA0699 protein </td> <td> AI934125 </td> <td> bicaudal D homolog 2 (Drosophila) </td> <td> BICD2 </td> <td> 23299 </td> <td> NM_001003800 /// NM_015250 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0072385 // minus-end-directed organelle transport along microtubule // inferred from sequence or structural similarity /// 0072393 // microtubule anchoring at microtubule organizing center // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from sequence or structural similarity </td> <td> 68.77 </td> <td> 149.11 </td> <td> 4.69 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 219628_at </td> <td> 219628_at </td> <td> NM_022470 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022470.1 /DEF=Homo sapiens hypothetical protein FLJ12296 similar to wild-type p53-induced gene 1 (FLJ12296), mRNA.  /FEA=mRNA /GEN=FLJ12296 /PROD=hypothetical protein FLJ12296 similar towild-type p53-induced gene 1 /DB_XREF=gi:11968018 /UG=Hs.252406 hypothetical protein FLJ12296 similar to wild-type p53-induced gene 1 /FL=gb:NM_022470.1 gb:BC002896.1 </td> <td> NM_022470 </td> <td> zinc finger, matrin-type 3 </td> <td> ZMAT3 </td> <td> 64393 </td> <td> NM_022470 /// NM_152240 /// XM_005247706 /// XM_006713725 /// XM_006713726 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 87.85 </td> <td> 168.88 </td> <td> 4.69 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 210705_s_at </td> <td> 210705_s_at </td> <td> AF220028 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF220028.1 /DEF=Homo sapiens tripartite motif protein TRIM5 isoform delta (TRIM5) mRNA, complete cds; alternatively spliced.  /FEA=mRNA /GEN=TRIM5 /PROD=tripartite motif protein TRIM5 isoform delta /DB_XREF=gi:12407386 /UG=Hs.30445 Homo sapiens tripartite motif protein TRIM5 isoform epsilon (TRIM5) mRNA, complete cds; alternatively spliced /FL=gb:AF220028.1 </td> <td> AF220028 </td> <td> tripartite motif containing 5 </td> <td> TRIM5 </td> <td> 85363 </td> <td> NM_033034 /// NM_033092 /// NM_033093 /// XM_005253183 /// XM_005253184 /// XM_006718358 </td> <td> 0002218 // activation of innate immune response // inferred from direct assay /// 0002221 // pattern recognition receptor signaling pathway // inferred from direct assay /// 0002376 // immune system process // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031664 // regulation of lipopolysaccharide-mediated signaling pathway // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from direct assay /// 0046597 // negative regulation of viral entry into host cell // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051607 // defense response to virus // traceable author statement /// 0070206 // protein trimerization // inferred from direct assay /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 1902187 // negative regulation of viral release from host cell // inferred from direct assay </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008329 // signaling pattern recognition receptor activity // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 53.23 </td> <td> 67.09 </td> <td> 4.69 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203182_s_at </td> <td> 203182_s_at </td> <td> NM_003138 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003138.1 /DEF=Homo sapiens SFRS protein kinase 2 (SRPK2), mRNA. /FEA=mRNA /GEN=SRPK2 /PROD=SFRS protein kinase 2 /DB_XREF=gi:4507220 /UG=Hs.78353 SFRS protein kinase 2 /FL=gb:U88666.1 gb:NM_003138.1 </td> <td> NM_003138 </td> <td> SRSF protein kinase 2 </td> <td> SRPK2 </td> <td> 6733 </td> <td> NM_001278273 /// NM_182691 /// NM_182692 /// XM_005250549 /// XM_005250550 /// XM_005250551 /// XM_006716098 </td> <td> 0000245 // spliceosomal complex assembly // inferred from direct assay /// 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008380 // RNA splicing // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035063 // nuclear speck organization // inferred from sequence or structural similarity /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0043525 // positive regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0045070 // positive regulation of viral genome replication // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // inferred by curator /// 0045787 // positive regulation of cell cycle // inferred from sequence or structural similarity /// 0048024 // regulation of mRNA splicing, via spliceosome // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0071889 // 14-3-3 protein binding // inferred from sequence or structural similarity </td> <td> 53.92 </td> <td> 138.54 </td> <td> 4.68 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209079_x_at </td> <td> 209079_x_at </td> <td> AF152318 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF152318.1 /DEF=Homo sapiens protocadherin gamma A1 (PCDH-gamma-A1) mRNA, complete cds.  /FEA=mRNA /GEN=PCDH-gamma-A1 /PROD=protocadherin gamma A1 /DB_XREF=gi:5456923 /UG=Hs.284180 protocadherin gamma subfamily A, 1 /FL=gb:NM_018912.1 gb:BC004321.1 gb:AF152318.1 </td> <td> AF152318 </td> <td> protocadherin gamma subfamily A, 1 /// protocadherin gamma subfamily A, 10 /// protocadherin gamma subfamily A, 11 /// protocadherin gamma subfamily A, 12 /// protocadherin gamma subfamily A, 2 /// protocadherin gamma subfamily A, 3 /// protocadherin gamma subfamily A, 4 /// protocadherin gamma subfamily A, 5 /// protocadherin gamma subfamily A, 6 /// protocadherin gamma subfamily A, 7 /// protocadherin gamma subfamily A, 8 /// protocadherin gamma subfamily A, 9 /// protocadherin gamma subfamily B, 1 /// protocadherin gamma subfamily B, 2 /// protocadherin gamma subfamily B, 3 /// protocadherin gamma subfamily B, 4 /// protocadherin gamma subfamily B, 5 /// protocadherin gamma subfamily B, 6 /// protocadherin gamma subfamily B, 7 /// protocadherin gamma subfamily C, 3 /// protocadherin gamma subfamily C, 4 /// protocadherin gamma subfamily C, 5 </td> <td> PCDHGA1 /// PCDHGA10 /// PCDHGA11 /// PCDHGA12 /// PCDHGA2 /// PCDHGA3 /// PCDHGA4 /// PCDHGA5 /// PCDHGA6 /// PCDHGA7 /// PCDHGA8 /// PCDHGA9 /// PCDHGB1 /// PCDHGB2 /// PCDHGB3 /// PCDHGB4 /// PCDHGB5 /// PCDHGB6 /// PCDHGB7 /// PCDHGC3 /// PCDHGC4 /// PCDHGC5 </td> <td> 5098 /// 8641 /// 9708 /// 26025 /// 56097 /// 56098 /// 56099 /// 56100 /// 56101 /// 56102 /// 56103 /// 56104 /// 56105 /// 56106 /// 56107 /// 56108 /// 56109 /// 56110 /// 56111 /// 56112 /// 56113 /// 56114 </td> <td> NM_002588 /// NM_003735 /// NM_003736 /// NM_014004 /// NM_018912 /// NM_018913 /// NM_018914 /// NM_018915 /// NM_018916 /// NM_018917 /// NM_018918 /// NM_018919 /// NM_018920 /// NM_018921 /// NM_018922 /// NM_018923 /// NM_018924 /// NM_018925 /// NM_018926 /// NM_018927 /// NM_018928 /// NM_018929 /// NM_031993 /// NM_032009 /// NM_032011 /// NM_032053 /// NM_032054 /// NM_032086 /// NM_032087 /// NM_032088 /// NM_032089 /// NM_032090 /// NM_032091 /// NM_032092 /// NM_032094 /// NM_032095 /// NM_032096 /// NM_032097 /// NM_032098 /// NM_032099 /// NM_032100 /// NM_032101 /// NM_032402 /// NM_032403 /// NM_032406 /// NM_032407 </td> <td> 0007155 // cell adhesion // traceable author statement /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -68.80 </td> <td> 348.98 </td> <td> -4.68 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201615_x_at </td> <td> 201615_x_at </td> <td> AI685060 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI685060 /FEA=EST /DB_XREF=gi:4896365 /DB_XREF=est:wc67a07.x1 /CLONE=IMAGE:2323668 /UG=Hs.325474 caldesmon 1 /FL=gb:NM_004342.2 gb:M64110.1 </td> <td> AI685060 </td> <td> caldesmon 1 </td> <td> CALD1 </td> <td> 800 </td> <td> NM_004342 /// NM_033138 /// NM_033139 /// NM_033140 /// NM_033157 /// XM_006716136 /// XM_006716137 /// XM_006716138 /// XM_006716139 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030478 // actin cap // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation </td> <td> -45.97 </td> <td> 138.54 </td> <td> -4.68 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213310_at </td> <td> 213310_at </td> <td> AI613483 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI613483 /FEA=EST /DB_XREF=gi:4622650 /DB_XREF=est:ty37e12.x1 /CLONE=IMAGE:2281294 /UG=Hs.324504 Homo sapiens mRNA; cDNA DKFZp586J0720 (from clone DKFZp586J0720) </td> <td> AI613483 </td> <td> argonaute RISC catalytic component 2 /// cancer susceptibility candidate 7 (non-protein coding) ///  /// Homo sapiens cDNA FLJ38845 fis, clone MESAN2003709. </td> <td> AGO2 /// CASC7 /// CASC7 /// DQ574852 </td> <td> 27161 /// 286109 </td> <td> NM_001164623 /// NM_012154 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006379 // mRNA cleavage // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006413 // translational initiation // non-traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031047 // gene silencing by RNA // inferred from sequence or structural similarity /// 0031054 // pre-miRNA processing // inferred from direct assay /// 0035278 // negative regulation of translation involved in gene silencing by miRNA // inferred from direct assay /// 0035278 // negative regulation of translation involved in gene silencing by miRNA // inferred from mutant phenotype /// 0035279 // mRNA cleavage involved in gene silencing by miRNA // inferred from direct assay /// 0035279 // mRNA cleavage involved in gene silencing by miRNA // inferred from mutant phenotype /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045947 // negative regulation of translational initiation // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0060213 // positive regulation of nuclear-transcribed mRNA poly(A) tail shortening // inferred from sequence or structural similarity /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // not recorded /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from direct assay /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation /// 1900153 // positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // inferred from sequence or structural similarity </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005844 // polysome // inferred from direct assay /// 0005845 // mRNA cap binding complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016442 // RISC complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0035068 // micro-ribonucleoprotein complex // inferred from direct assay </td> <td> 0000340 // RNA 7-methylguanosine cap binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // non-traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004521 // endoribonuclease activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016891 // endoribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0035197 // siRNA binding // inferred from direct assay /// 0035198 // miRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070551 // endoribonuclease activity, cleaving siRNA-paired mRNA // inferred from direct assay </td> <td> -91.80 </td> <td> 187.28 </td> <td> -4.68 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 218303_x_at </td> <td> 218303_x_at </td> <td> NM_016618 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016618.1 /DEF=Homo sapiens hypothetical protein (LOC51315), mRNA. /FEA=mRNA /GEN=LOC51315 /PROD=hypothetical protein /DB_XREF=gi:7706155 /UG=Hs.5721 hypothetical protein /FL=gb:AF208845.1 gb:AF217520.1 gb:NM_016618.1 </td> <td> NM_016618 </td> <td> lysine-rich coiled-coil 1 </td> <td> KRCC1 </td> <td> 51315 </td> <td> NM_016618 /// XM_005264360 </td> <td>  </td> <td>  </td> <td>  </td> <td> -99.65 </td> <td> 312.82 </td> <td> -4.68 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 222039_at </td> <td> 222039_at </td> <td> AA292789 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA292789 /FEA=EST /DB_XREF=gi:1941611 /DB_XREF=est:zt56d09.s1 /CLONE=IMAGE:726353 /UG=Hs.274448 hypothetical protein FLJ11029 </td> <td> AA292789 </td> <td> kinesin family member 18B </td> <td> KIF18B </td> <td> 146909 </td> <td> NM_001080443 /// NM_001264573 /// NM_001265577 /// XM_005257077 </td> <td> 0000278 // mitotic cell cycle // inferred from direct assay /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007019 // microtubule depolymerization // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0008152 // metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051302 // regulation of cell division // inferred from direct assay </td> <td> 0000235 // astral microtubule // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0035371 // microtubule plus-end // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from direct assay /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction </td> <td> 59.57 </td> <td> 113.19 </td> <td> 4.67 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217760_at </td> <td> 217760_at </td> <td> AA176780 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA176780 /FEA=EST /DB_XREF=gi:1757929 /DB_XREF=est:zp32a10.s1 /CLONE=IMAGE:611130 /UG=Hs.14512 DIPB protein /FL=gb:NM_017583.1 </td> <td> AA176780 </td> <td> tripartite motif containing 44 </td> <td> TRIM44 </td> <td> 54765 </td> <td> NM_017583 /// XM_006718254 </td> <td>  </td> <td> 0005622 // intracellular // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 65.47 </td> <td> 150.71 </td> <td> 4.67 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 221505_at </td> <td> 221505_at </td> <td> AW612574 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW612574 /FEA=EST /DB_XREF=gi:7317760 /DB_XREF=est:hh05b12.x1 /CLONE=IMAGE:2954207 /UG=Hs.71331 hypothetical protein MGC5350 /FL=gb:BC003380.1 </td> <td> AW612574 </td> <td> acidic (leucine-rich) nuclear phosphoprotein 32 family, member E </td> <td> ANP32E </td> <td> 81611 </td> <td> NM_001136478 /// NM_001136479 /// NM_001280559 /// NM_001280560 /// NM_030920 /// XM_005245513 /// XM_005245514 /// XR_426799 /// XR_426800 </td> <td> 0016568 // chromatin modification // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0043486 // histone exchange // inferred from direct assay </td> <td> 0000812 // Swr1 complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0019212 // phosphatase inhibitor activity // inferred from sequence or structural similarity /// 0042393 // histone binding // inferred from direct assay </td> <td> 55.70 </td> <td> 294.72 </td> <td> 4.67 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 221059_s_at </td> <td> 221059_s_at </td> <td> NM_021615 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021615.1 /DEF=Homo sapiens carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 (CHST6), mRNA.  /FEA=mRNA /GEN=CHST6 /PROD=carbohydrate (N-acetylglucosamine 6-O)sulfotransferase 6 /DB_XREF=gi:11055975 /UG=Hs.157439 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 /FL=gb:AF219990.1 gb:NM_021615.1 </td> <td> NM_021615 </td> <td> coactosin-like F-actin binding protein 1 </td> <td> COTL1 </td> <td> 23406 </td> <td> NM_021149 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006044 // N-acetylglucosamine metabolic process // inferred by curator /// 0006044 // N-acetylglucosamine metabolic process // inferred from direct assay /// 0006790 // sulfur compound metabolic process // inferred from direct assay /// 0018146 // keratan sulfate biosynthetic process // inferred from direct assay /// 0018146 // keratan sulfate biosynthetic process // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0042339 // keratan sulfate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050832 // defense response to fungus // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001517 // N-acetylglucosamine 6-O-sulfotransferase activity // inferred from direct assay /// 0001517 // N-acetylglucosamine 6-O-sulfotransferase activity // traceable author statement /// 0003779 // actin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> -186.15 </td> <td> 468.32 </td> <td> -4.67 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212188_at </td> <td> 212188_at </td> <td> AA551075 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA551075 /FEA=EST /DB_XREF=gi:2321327 /DB_XREF=est:nk74h06.s1 /CLONE=IMAGE:1019291 /UG=Hs.109438 Homo sapiens clone 24775 mRNA sequence </td> <td> AA551075 </td> <td> potassium channel tetramerization domain containing 12 </td> <td> KCTD12 </td> <td> 115207 </td> <td> NM_138444 </td> <td> 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 226.15 </td> <td> 407.93 </td> <td> 4.67 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204382_at </td> <td> 204382_at </td> <td> NM_015654 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015654.1 /DEF=Homo sapiens DKFZP564C103 protein (DKFZP564C103), mRNA. /FEA=mRNA /GEN=DKFZP564C103 /PROD=DKFZP564C103 protein /DB_XREF=gi:7661603 /UG=Hs.144058 DKFZP564C103 protein /FL=gb:BC004195.1 gb:BC004225.1 gb:NM_015654.1 </td> <td> NM_015654 </td> <td> N-acetyltransferase 9 (GCN5-related, putative) </td> <td> NAT9 </td> <td> 26151 </td> <td> NM_015654 /// XM_005257207 /// XM_005257212 /// XM_006721812 /// XM_006721813 /// XM_006721814 /// XM_006721815 /// XM_006721816 /// XR_243644 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0043234 // protein complex // inferred from direct assay </td> <td> 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation </td> <td> 51.02 </td> <td> 48.61 </td> <td> 4.67 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217407_x_at </td> <td> 217407_x_at </td> <td> U37220 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U37220.1 /DEF=Human cyclophilin-like protein mRNA, partial cds. /FEA=mRNA /PROD=cyclophilin-like protein /DB_XREF=gi:1199599 /UG=Hs.93523 peptidylprolyl isomerase (cyclophilin)-like 2 </td> <td> U37220 </td> <td> peptidylprolyl isomerase (cyclophilin)-like 2 </td> <td> PPIL2 </td> <td> 23759 </td> <td> NM_014337 /// NM_148175 /// NM_148176 /// XM_005261447 /// XM_005261448 /// XM_006724197 /// XM_006724198 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031641 // regulation of myelination // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0051898 // negative regulation of protein kinase B signaling // inferred from electronic annotation </td> <td> 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005796 // Golgi lumen // traceable author statement </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from direct assay </td> <td> 37.63 </td> <td> 31.51 </td> <td> 4.66 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213293_s_at </td> <td> 213293_s_at </td> <td> AA083478 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA083478 /FEA=EST /DB_XREF=gi:1625564 /DB_XREF=est:zn32e02.s1 /CLONE=IMAGE:549146 /UG=Hs.295978 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 746039 </td> <td> AA083478 </td> <td> tripartite motif containing 22 </td> <td> TRIM22 </td> <td> 10346 </td> <td> NM_001199573 /// NM_006074 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006955 // immune response // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 0070206 // protein trimerization // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 84.37 </td> <td> 374.54 </td> <td> 4.66 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213860_x_at </td> <td> 213860_x_at </td> <td> AW268585 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW268585 /FEA=EST /DB_XREF=gi:6655615 /DB_XREF=est:xv34g06.x1 /CLONE=IMAGE:2815066 /UG=Hs.84264 acidic protein rich in leucines </td> <td> AW268585 </td> <td> casein kinase 1, alpha 1 </td> <td> CSNK1A1 </td> <td> 1452 </td> <td> NM_001025105 /// NM_001271741 /// NM_001271742 /// NM_001892 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -153.73 </td> <td> 759.21 </td> <td> -4.66 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201729_s_at </td> <td> 201729_s_at </td> <td> NM_014680 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014680.1 /DEF=Homo sapiens KIAA0100 gene product (KIAA0100), mRNA. /FEA=mRNA /GEN=KIAA0100 /PROD=KIAA0100 gene product /DB_XREF=gi:7661903 /UG=Hs.151761 KIAA0100 gene product /FL=gb:D43947.1 gb:NM_014680.1 </td> <td> NM_014680 </td> <td> KIAA0100 </td> <td> KIAA0100 </td> <td> 9703 </td> <td> NM_014680 /// XM_005258073 /// XM_006722198 /// XR_429933 </td> <td>  </td> <td> 0005576 // extracellular region // inferred from electronic annotation </td> <td>  </td> <td> 49.88 </td> <td> 177.04 </td> <td> 4.66 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209232_s_at </td> <td> 209232_s_at </td> <td> BC004191 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004191.1 /DEF=Homo sapiens, dynactin 4, clone MGC:3248, mRNA, complete cds. /FEA=mRNA /PROD=dynactin 4 /DB_XREF=gi:13278857 /UG=Hs.111429 Homo sapiens, dynactin 4, clone MGC:3248, mRNA, complete cds /FL=gb:BC004191.1 </td> <td> BC004191 </td> <td> dynactin 5 (p25) </td> <td> DCTN5 </td> <td> 84516 </td> <td> NM_001199011 /// NM_001199743 /// NM_032486 /// NR_037573 /// XR_243320 </td> <td> 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td>  </td> <td> 93.65 </td> <td> 93.33 </td> <td> 4.66 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202056_at </td> <td> 202056_at </td> <td> AW051311 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW051311 /FEA=EST /DB_XREF=gi:5913581 /DB_XREF=est:wy89b01.x1 /CLONE=IMAGE:2555689 /UG=Hs.169149 karyopherin alpha 1 (importin alpha 5) /FL=gb:BC002374.1 gb:BC003009.1 gb:NM_002264.1 </td> <td> AW051311 </td> <td> karyopherin alpha 1 (importin alpha 5) </td> <td> KPNA1 </td> <td> 3836 </td> <td> NM_002264 /// NR_026698 /// XM_005247437 /// XM_005247439 </td> <td> 0000018 // regulation of DNA recombination // traceable author statement /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0042307 // positive regulation of protein import into nucleus // inferred from sequence or structural similarity /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0030425 // dendrite // inferred from sequence or structural similarity </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> 47.07 </td> <td> 83.89 </td> <td> 4.65 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 214971_s_at </td> <td> 214971_s_at </td> <td> AV695711 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV695711 /FEA=EST /DB_XREF=gi:10297574 /DB_XREF=est:AV695711 /CLONE=GKCDXA06 /UG=Hs.2554 sialyltransferase 1 (beta-galactoside alpha-2,6-sialytransferase) </td> <td> AV695711 </td> <td> ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 </td> <td> ST6GAL1 </td> <td> 6480 </td> <td> NM_003032 /// NM_173216 /// NM_173217 /// XM_005247717 /// XM_005247719 /// XM_005247720 /// XM_006713734 </td> <td> 0006054 // N-acetylneuraminate metabolic process // inferred from direct assay /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0016266 // O-glycan processing // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // inferred from direct assay /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0097503 // sialylation // inferred from direct assay </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030173 // integral component of Golgi membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003835 // beta-galactoside alpha-2,6-sialyltransferase activity // inferred from direct assay /// 0008373 // sialyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> -117.88 </td> <td> 91.76 </td> <td> -4.65 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 207265_s_at </td> <td> 207265_s_at </td> <td> NM_016657 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016657.1 /DEF=Homo sapiens KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 (KDELR3), transcript variant 2, mRNA.  /FEA=mRNA /GEN=KDELR3 /PROD=KDEL receptor 3, isoform b /DB_XREF=gi:8051610 /UG=Hs.250696 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 /FL=gb:NM_016657.1 </td> <td> NM_016657 </td> <td> KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 </td> <td> KDELR3 </td> <td> 11015 </td> <td> NM_006855 /// NM_016657 </td> <td> 0006621 // protein retention in ER lumen // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0046923 // ER retention sequence binding // inferred from electronic annotation </td> <td> 106.07 </td> <td> 259.16 </td> <td> 4.65 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 205541_s_at </td> <td> 205541_s_at </td> <td> NM_018094 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018094.1 /DEF=Homo sapiens hypothetical protein FLJ10441 (FLJ10441), mRNA. /FEA=mRNA /GEN=FLJ10441 /PROD=hypothetical protein FLJ10441 /DB_XREF=gi:8922423 /UG=Hs.59523 hypothetical protein FLJ10441 /FL=gb:NM_018094.1 </td> <td> NM_018094 </td> <td> G1 to S phase transition 2 </td> <td> GSPT2 </td> <td> 23708 </td> <td> NM_018094 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 42.60 </td> <td> 87.22 </td> <td> 4.65 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208857_s_at </td> <td> 208857_s_at </td> <td> M93008 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M93008.1 /DEF=Human L-isoaspartylD-aspartyl protein carboxyl methyltransferase isozyme II mRNA, complete cds.  /FEA=mRNA /PROD=L-isoaspartylD-aspartyl protein carboxylmethyltransferase /DB_XREF=gi:180636 /UG=Hs.79137 protein-L-isoaspartate (D-aspartate) O-methyltransferase /FL=gb:D25546.1 gb:M93008.1 gb:D13892.1 </td> <td> M93008 </td> <td> protein-L-isoaspartate (D-aspartate) O-methyltransferase </td> <td> PCMT1 </td> <td> 5110 </td> <td> NM_001252049 /// NM_001252050 /// NM_001252051 /// NM_001252052 /// NM_001252053 /// NM_005389 </td> <td> 0006464 // cellular protein modification process // inferred from electronic annotation /// 0006479 // protein methylation // traceable author statement /// 0030091 // protein repair // traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0046498 // S-adenosylhomocysteine metabolic process // inferred from electronic annotation /// 0046500 // S-adenosylmethionine metabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004719 // protein-L-isoaspartate (D-aspartate) O-methyltransferase activity // traceable author statement /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 68.75 </td> <td> 205.20 </td> <td> 4.64 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212747_at </td> <td> 212747_at </td> <td> AI990523 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI990523 /FEA=EST /DB_XREF=gi:5837404 /DB_XREF=est:ws40g04.x1 /CLONE=IMAGE:2499702 /UG=Hs.20060 KIAA0229 protein </td> <td> AI990523 </td> <td> ankyrin repeat and sterile alpha motif domain containing 1A </td> <td> ANKS1A </td> <td> 23294 </td> <td> NM_015245 /// XM_005248964 /// XM_006715033 /// XM_006715034 /// XM_006715035 /// XM_006715036 /// XM_006715037 /// XM_006715038 </td> <td> 0006929 // substrate-dependent cell migration // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0048013 // ephrin receptor signaling pathway // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from electronic annotation </td> <td> 44.58 </td> <td> 79.59 </td> <td> 4.64 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 219600_s_at </td> <td> 219600_s_at </td> <td> NM_006134 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006134.2 /DEF=Homo sapiens chromosome 21 open reading frame 4 (C21ORF4), mRNA. /FEA=mRNA /GEN=C21ORF4 /PROD=chromosome 21 open reading frame 4 /DB_XREF=gi:8659558 /UG=Hs.284142 chromosome 21 open reading frame 4 /FL=gb:BC000569.1 gb:AF045606.2 gb:NM_006134.2 </td> <td> NM_006134 </td> <td> transmembrane protein 50B </td> <td> TMEM50B </td> <td> 757 </td> <td> NM_006134 /// NR_038211 /// NR_040016 </td> <td>  </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 50.75 </td> <td> 116.15 </td> <td> 4.64 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208598_s_at </td> <td> 208598_s_at </td> <td> NM_005703 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005703.2 /DEF=Homo sapiens upstream regulatory element binding protein 1 (UREB1), mRNA.  /FEA=CDS /GEN=UREB1 /PROD=upstream regulatory element binding protein 1 /DB_XREF=gi:6692990 /UG=Hs.3383 upstream regulatory element binding protein 1 /FL=gb:NM_005703.2 </td> <td> NM_005703 </td> <td> HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase </td> <td> HUWE1 </td> <td> 10075 </td> <td> NM_031407 /// XM_005261965 /// XM_005261966 /// XM_005261967 /// XM_005261968 /// XM_005261969 /// XM_005261971 /// XM_005261972 /// XM_006724574 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006284 // base-excision repair // inferred from mutant phenotype /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016574 // histone ubiquitination // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from sequence or structural similarity /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -139.57 </td> <td> 579.91 </td> <td> -4.64 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212282_at </td> <td> 212282_at </td> <td> BF038366 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF038366 /FEA=EST /DB_XREF=gi:10744142 /DB_XREF=est:601459338F1 /CLONE=IMAGE:3862808 /UG=Hs.199695 hypothetical protein </td> <td> BF038366 </td> <td> transmembrane protein 97 </td> <td> TMEM97 </td> <td> 27346 </td> <td> NM_014573 /// XM_005257965 </td> <td> 0001558 // regulation of cell growth // non-traceable author statement /// 0042632 // cholesterol homeostasis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 49.72 </td> <td> 130.09 </td> <td> 4.64 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217976_s_at </td> <td> 217976_s_at </td> <td> NM_016141 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016141.1 /DEF=Homo sapiens dynein light chain-A (LOC51143), mRNA. /FEA=mRNA /GEN=LOC51143 /PROD=dynein light chain-A /DB_XREF=gi:7705852 /UG=Hs.266483 dynein light chain-A /FL=gb:AF078849.1 gb:NM_016141.1 </td> <td> NM_016141 </td> <td> dynein, cytoplasmic 1, light intermediate chain 1 </td> <td> DYNC1LI1 </td> <td> 51143 </td> <td> NM_016141 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from mutant phenotype </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000922 // spindle pole // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030286 // dynein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 62.87 </td> <td> 122.04 </td> <td> 4.63 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212870_at </td> <td> 212870_at </td> <td> AI628605 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI628605 /FEA=EST /DB_XREF=gi:4665405 /DB_XREF=est:ty77a08.x1 /CLONE=IMAGE:2285078 /UG=Hs.326392 son of sevenless (Drosophila) homolog 1 /FL=gb:L13858.1 gb:NM_005633.1 </td> <td> AI628605 </td> <td> son of sevenless homolog 2 (Drosophila) </td> <td> SOS2 </td> <td> 6655 </td> <td> NM_006939 /// XM_005268021 </td> <td> 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051057 // positive regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -56.40 </td> <td> 122.00 </td> <td> -4.63 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204881_s_at </td> <td> 204881_s_at </td> <td> NM_003358 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003358.1 /DEF=Homo sapiens UDP-glucose ceramide glucosyltransferase (UGCG), mRNA. /FEA=mRNA /GEN=UGCG /PROD=ceramide glucosyltransferase /DB_XREF=gi:4507810 /UG=Hs.152601 UDP-glucose ceramide glucosyltransferase /FL=gb:D50840.1 gb:NM_003358.1 </td> <td> NM_003358 </td> <td> UDP-glucose ceramide glucosyltransferase </td> <td> UGCG </td> <td> 7357 </td> <td> NM_003358 /// XM_005252186 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006679 // glucosylceramide biosynthetic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0006688 // glycosphingolipid biosynthetic process // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0008120 // ceramide glucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> -488.40 </td> <td> 709.60 </td> <td> -4.63 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 205017_s_at </td> <td> 205017_s_at </td> <td> AI088145 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI088145 /FEA=EST /DB_XREF=gi:3427121 /DB_XREF=est:oz95h07.x1 /CLONE=IMAGE:1683133 /UG=Hs.184340 C3H-type zinc finger protein; similar to D. melanogaster muscleblind B protein /FL=gb:AF061261.1 gb:NM_005757.2 </td> <td> AI088145 </td> <td> muscleblind-like splicing regulator 2 </td> <td> MBNL2 </td> <td> 10150 </td> <td> NM_144778 /// NM_207304 /// XM_005254018 /// XM_005254019 /// XM_005254020 /// XM_005254021 /// XM_005254022 /// XM_006719912 </td> <td> 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -115.15 </td> <td> 114.12 </td> <td> -4.63 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202330_s_at </td> <td> 202330_s_at </td> <td> NM_003362 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003362.1 /DEF=Homo sapiens uracil-DNA glycosylase (UNG), mRNA. /FEA=mRNA /GEN=UNG /PROD=uracil-DNA glycosylase /DB_XREF=gi:6224978 /UG=Hs.78853 uracil-DNA glycosylase /FL=gb:NM_003362.1 </td> <td> NM_003362 </td> <td> uracil-DNA glycosylase </td> <td> UNG </td> <td> 7374 </td> <td> NM_003362 /// NM_080911 </td> <td> 0006281 // DNA repair // traceable author statement /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016446 // somatic hypermutation of immunoglobulin genes // inferred from electronic annotation /// 0016447 // somatic recombination of immunoglobulin gene segments // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0004844 // uracil DNA N-glycosylase activity // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0016799 // hydrolase activity, hydrolyzing N-glycosyl compounds // inferred from electronic annotation </td> <td> 49.65 </td> <td> 61.55 </td> <td> 4.63 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201873_s_at </td> <td> 201873_s_at </td> <td> NM_002940 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002940.1 /DEF=Homo sapiens ATP-binding cassette, sub-family E (OABP), member 1 (ABCE1), mRNA.  /FEA=mRNA /GEN=ABCE1 /PROD=ATP-binding cassette, sub-family E, member 1 /DB_XREF=gi:4506558 /UG=Hs.12013 ATP-binding cassette, sub-family E (OABP), member 1 /FL=gb:NM_002940.1 </td> <td> NM_002940 </td> <td> ATP-binding cassette, sub-family E (OABP), member 1 </td> <td> ABCE1 </td> <td> 6059 </td> <td> NM_001040876 /// NM_002940 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006401 // RNA catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008428 // ribonuclease inhibitor activity // traceable author statement /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation </td> <td> 111.25 </td> <td> 272.18 </td> <td> 4.63 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 219622_at </td> <td> 219622_at </td> <td> NM_017817 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017817.1 /DEF=Homo sapiens hypothetical protein FLJ20429 (FLJ20429), mRNA. /FEA=mRNA /GEN=FLJ20429 /PROD=hypothetical protein FLJ20429 /DB_XREF=gi:8923400 /UG=Hs.179791 hypothetical protein FLJ20429 /FL=gb:NM_017817.1 </td> <td> NM_017817 </td> <td> RAB20, member RAS oncogene family </td> <td> RAB20 </td> <td> 55647 </td> <td> NM_017817 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0090383 // phagosome acidification // inferred from mutant phenotype /// 0090385 // phagosome-lysosome fusion // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> -44.12 </td> <td> 64.51 </td> <td> -4.63 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208738_x_at </td> <td> 208738_x_at </td> <td> AK024823 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024823.1 /DEF=Homo sapiens cDNA: FLJ21170 fis, clone CAS10946, highly similar to HSSMT3B Homo sapiens mRNA for SMT3B protein.  /FEA=mRNA /DB_XREF=gi:10437226 /UG=Hs.180139 SMT3 (suppressor of mif two 3, yeast) homolog 2 /FL=gb:L76416.1 gb:NM_006937.1 </td> <td> AK024823 </td> <td> small ubiquitin-related modifier 2-like /// small ubiquitin-like modifier 2 /// small ubiquitin-like modifier 3 </td> <td> LOC101929087 /// SUMO2 /// SUMO3 </td> <td> 6612 /// 6613 /// 101929087 </td> <td> NM_001005849 /// NM_001286416 /// NM_006936 /// NM_006937 /// XM_005250081 /// XM_005276013 /// XM_005276311 </td> <td> 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // traceable author statement /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0000776 // kinetochore // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 159.40 </td> <td> 535.38 </td> <td> 4.63 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212904_at </td> <td> 212904_at </td> <td> AB033011 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB033011.1 /DEF=Homo sapiens mRNA for KIAA1185 protein, partial cds. /FEA=mRNA /GEN=KIAA1185 /PROD=KIAA1185 protein /DB_XREF=gi:6330301 /UG=Hs.268488 KIAA1185 protein </td> <td> AB033011 </td> <td> leucine rich repeat containing 47 </td> <td> LRRC47 </td> <td> 57470 </td> <td> NM_020710 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td>  </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0004826 // phenylalanine-tRNA ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 72.80 </td> <td> 306.18 </td> <td> 4.63 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204396_s_at </td> <td> 204396_s_at </td> <td> NM_005308 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005308.1 /DEF=Homo sapiens G protein-coupled receptor kinase 5 (GPRK5), mRNA. /FEA=mRNA /GEN=GPRK5 /PROD=G protein-coupled receptor kinase 5 /DB_XREF=gi:4885348 /UG=Hs.211569 G protein-coupled receptor kinase 5 /FL=gb:L15388.1 gb:NM_005308.1 </td> <td> NM_005308 </td> <td> G protein-coupled receptor kinase 5 </td> <td> GRK5 </td> <td> 2869 </td> <td> NM_005308 /// XM_005269707 /// XM_005269708 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007217 // tachykinin receptor signaling pathway // inferred from direct assay /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004703 // G-protein coupled receptor kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -102.03 </td> <td> 203.89 </td> <td> -4.63 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 221085_at </td> <td> 221085_at </td> <td> NM_005118 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005118.1 /DEF=Homo sapiens tumor necrosis factor (ligand) superfamily, member 15 (TNFSF15), mRNA.  /FEA=mRNA /GEN=TNFSF15 /PROD=tumor necrosis factor (ligand) superfamily,member 15 /DB_XREF=gi:4827031 /UG=Hs.241382 tumor necrosis factor (ligand) superfamily, member 15 /FL=gb:NM_005118.1 </td> <td> NM_005118 </td> <td> tumor necrosis factor (ligand) superfamily, member 15 </td> <td> TNFSF15 </td> <td> 9966 </td> <td> NM_001204344 /// NM_005118 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from direct assay /// 0042107 // cytokine metabolic process // inferred from direct assay /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement </td> <td> 0005102 // receptor binding // traceable author statement /// 0005123 // death receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -116.98 </td> <td> 150.11 </td> <td> -4.62 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 205159_at </td> <td> 205159_at </td> <td> AV756141 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV756141 /FEA=EST /DB_XREF=gi:10913989 /DB_XREF=est:AV756141 /CLONE=BMFAKF10 /UG=Hs.285401 colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) /FL=gb:NM_000395.1 gb:M59941.1 </td> <td> AV756141 </td> <td> colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) </td> <td> CSF2RB </td> <td> 1439 </td> <td> NM_000395 /// XM_005261340 /// XM_005261342 </td> <td> 0007165 // signal transduction // non-traceable author statement /// 0007585 // respiratory gaseous exchange // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0036016 // cellular response to interleukin-3 // traceable author statement /// 0038043 // interleukin-5-mediated signaling pathway // traceable author statement /// 0038156 // interleukin-3-mediated signaling pathway // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030526 // granulocyte macrophage colony-stimulating factor receptor complex // traceable author statement </td> <td> 0004872 // receptor activity // traceable author statement /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004912 // interleukin-3 receptor activity // traceable author statement /// 0004914 // interleukin-5 receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -150.57 </td> <td> 282.41 </td> <td> -4.62 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 221870_at </td> <td> 221870_at </td> <td> AI417917 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI417917 /FEA=EST /DB_XREF=gi:4261421 /DB_XREF=est:tg55d04.x1 /CLONE=IMAGE:2112679 /UG=Hs.20733 Homo sapiens cDNA: FLJ22356 fis, clone HRC06345 </td> <td> AI417917 </td> <td> EH-domain containing 2 </td> <td> EHD2 </td> <td> 30846 </td> <td> NM_014601 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from genetic interaction /// 0072659 // protein localization to plasma membrane // inferred from sequence or structural similarity /// 1901741 // positive regulation of myoblast fusion // inferred from sequence or structural similarity /// 2001137 // positive regulation of endocytic recycling // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005901 // caveola // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 153.10 </td> <td> 252.43 </td> <td> 4.62 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201959_s_at </td> <td> 201959_s_at </td> <td> AA488899 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA488899 /FEA=EST /DB_XREF=gi:2218501 /DB_XREF=est:aa55h06.s1 /CLONE=IMAGE:824891 /UG=Hs.151411 KIAA0916 protein /FL=gb:AF075587.1 gb:AF083244.1 gb:NM_015057.1 </td> <td> AA488899 </td> <td> MYC binding protein 2, E3 ubiquitin protein ligase </td> <td> MYCBP2 </td> <td> 23077 </td> <td> NM_015057 /// XM_005266299 /// XM_005266300 /// XM_006719779 /// XM_006719780 /// XM_006719781 /// XM_006719782 /// XM_006719783 /// XM_006719784 /// XM_006719785 /// XM_006719786 /// XM_006719787 /// XM_006719788 /// XM_006719789 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008045 // motor neuron axon guidance // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0021785 // branchiomotor neuron axon guidance // inferred from electronic annotation /// 0021952 // central nervous system projection neuron axonogenesis // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -50.30 </td> <td> 176.70 </td> <td> -4.61 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203521_s_at </td> <td> 203521_s_at </td> <td> NM_014345 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014345.1 /DEF=Homo sapiens endocrine regulator (HRIHFB2436), mRNA. /FEA=mRNA /GEN=HRIHFB2436 /PROD=endocrine regulator /DB_XREF=gi:7657183 /UG=Hs.48433 endocrine regulator /FL=gb:AF121141.1 gb:NM_014345.1 </td> <td> NM_014345 </td> <td> zinc finger protein 318 </td> <td> ZNF318 </td> <td> 24149 </td> <td> NM_014345 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007126 // meiotic nuclear division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 44.58 </td> <td> 53.26 </td> <td> 4.61 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213011_s_at </td> <td> 213011_s_at </td> <td> BF116254 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF116254 /FEA=EST /DB_XREF=gi:10985730 /DB_XREF=est:7n79g04.x1 /CLONE=IMAGE:3570991 /UG=Hs.83848 triosephosphate isomerase 1 </td> <td> BF116254 </td> <td> triosephosphate isomerase 1 </td> <td> TPI1 </td> <td> 7167 </td> <td> NM_000365 /// NM_001159287 /// NM_001258026 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0019682 // glyceraldehyde-3-phosphate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004807 // triose-phosphate isomerase activity // not recorded /// 0004807 // triose-phosphate isomerase activity // non-traceable author statement /// 0004807 // triose-phosphate isomerase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation </td> <td> -299.25 </td> <td> 1242.20 </td> <td> -4.61 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212034_s_at </td> <td> 212034_s_at </td> <td> AB028990 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB028990.1 /DEF=Homo sapiens mRNA for KIAA1067 protein, partial cds. /FEA=mRNA /GEN=KIAA1067 /PROD=KIAA1067 protein /DB_XREF=gi:5689470 /UG=Hs.325530 KIAA1067 protein </td> <td> AB028990 </td> <td> exocyst complex component 7 </td> <td> EXOC7 </td> <td> 23265 </td> <td> NM_001013839 /// NM_001145297 /// NM_001145298 /// NM_001145299 /// NM_001282313 /// NM_001282314 /// NM_015219 /// XM_006721786 /// XM_006721787 /// XM_006721788 /// XM_006721789 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000145 // exocyst // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032584 // growth cone membrane // inferred from electronic annotation /// 0034451 // centriolar satellite // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 44.97 </td> <td> 138.31 </td> <td> 4.61 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201375_s_at </td> <td> 201375_s_at </td> <td> NM_004156 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004156.1 /DEF=Homo sapiens protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform (PPP2CB), mRNA.  /FEA=mRNA /GEN=PPP2CB /PROD=protein phosphatase 2 (formerly 2A), catalyticsubunit, beta isoform /DB_XREF=gi:4758951 /UG=Hs.80350 protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform /FL=gb:NM_004156.1 </td> <td> NM_004156 </td> <td> protein phosphatase 2, catalytic subunit, beta isozyme </td> <td> PPP2CB </td> <td> 5516 </td> <td> NM_001009552 /// NM_004156 </td> <td> 0006470 // protein dephosphorylation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from electronic annotation /// 0042221 // response to chemical // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from electronic annotation </td> <td> 0000159 // protein phosphatase type 2A complex // traceable author statement /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity </td> <td> 174.33 </td> <td> 943.76 </td> <td> 4.61 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 215380_s_at </td> <td> 215380_s_at </td> <td> AK021779 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK021779.1 /DEF=Homo sapiens cDNA FLJ11717 fis, clone HEMBA1005241. /FEA=mRNA /DB_XREF=gi:10433033 /UG=Hs.288649 hypothetical protein MGC3077 </td> <td> AK021779 </td> <td> gamma-glutamylcyclotransferase </td> <td> GGCT </td> <td> 79017 </td> <td> NM_001199815 /// NM_001199816 /// NM_001199817 /// NM_024051 /// NR_037669 </td> <td> 0001836 // release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0006750 // glutathione biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1901687 // glutathione derivative biosynthetic process // traceable author statement </td> <td> 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003839 // gamma-glutamylcyclotransferase activity // inferred from direct assay /// 0003839 // gamma-glutamylcyclotransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> 129.55 </td> <td> 299.65 </td> <td> 4.61 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208855_s_at </td> <td> 208855_s_at </td> <td> AF083420 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF083420.1 /DEF=Homo sapiens brain-specific STE20-like protein kinase 3 (STK3) mRNA, complete cds.  /FEA=mRNA /GEN=STK3 /PROD=brain-specific STE20-like protein kinase 3 /DB_XREF=gi:5326765 /UG=Hs.168913 serinethreonine kinase 24 (Ste20, yeast homolog) /FL=gb:AF083420.1 </td> <td> AF083420 </td> <td> serine/threonine kinase 24 </td> <td> STK24 </td> <td> 8428 </td> <td> NM_001032296 /// NM_001286649 /// NM_003576 /// XM_005254078 /// XM_005254079 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008631 // intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // not recorded /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048679 // regulation of axon regeneration // inferred from mutant phenotype /// 0097194 // execution phase of apoptosis // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -117.65 </td> <td> 647.23 </td> <td> -4.61 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 205920_at </td> <td> 205920_at </td> <td> NM_003043 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003043.1 /DEF=Homo sapiens solute carrier family 6 (neurotransmitter transporter, taurine), member 6 (SLC6A6), mRNA.  /FEA=mRNA /GEN=SLC6A6 /PROD=solute carrier family 6 (neurotransmittertransporter, taurine), member 6 /DB_XREF=gi:4507044 /UG=Hs.1194 solute carrier family 6 (neurotransmitter transporter, taurine), member 6 /FL=gb:NM_003043.1 gb:U16120.1 gb:U09220.1 </td> <td> NM_003043 </td> <td> solute carrier family 6 (neurotransmitter transporter), member 6 </td> <td> SLC6A6 </td> <td> 6533 </td> <td> NM_001134367 /// NM_001134368 /// NM_003043 /// NR_103507 /// XM_006713307 /// XR_427286 </td> <td> 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // traceable author statement /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0015734 // taurine transport // inferred from electronic annotation /// 0015849 // organic acid transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement </td> <td> 0005328 // neurotransmitter:sodium symporter activity // inferred from electronic annotation /// 0005368 // taurine transmembrane transporter activity // inferred from electronic annotation /// 0005369 // taurine:sodium symporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0030977 // taurine binding // inferred from electronic annotation </td> <td> -35.90 </td> <td> 24.40 </td> <td> -4.60 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217899_at </td> <td> 217899_at </td> <td> NM_017727 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017727.1 /DEF=Homo sapiens hypothetical protein FLJ20254 (FLJ20254), mRNA. /FEA=mRNA /GEN=FLJ20254 /PROD=hypothetical protein FLJ20254 /DB_XREF=gi:8923227 /UG=Hs.15356 hypothetical protein FLJ20254 /FL=gb:BC002467.1 gb:NM_017727.1 </td> <td> NM_017727 </td> <td> transmembrane protein 214 </td> <td> TMEM214 </td> <td> 54867 </td> <td> NM_001083590 /// NM_017727 /// XM_005264381 /// XM_005264382 /// XM_005264383 /// XM_006712036 /// XR_244942 /// XR_426985 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 72.80 </td> <td> 153.00 </td> <td> 4.60 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209089_at </td> <td> 209089_at </td> <td> BC001267 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001267.1 /DEF=Homo sapiens, RAB5A, member RAS oncogene family, clone MGC:5048, mRNA, complete cds.  /FEA=mRNA /PROD=RAB5A, member RAS oncogene family /DB_XREF=gi:12654846 /UG=Hs.73957 RAB5A, member RAS oncogene family /FL=gb:BC001267.1 </td> <td> BC001267 </td> <td> RAB5A, member RAS oncogene family </td> <td> RAB5A </td> <td> 5868 </td> <td> NM_001292048 /// NM_004162 </td> <td> 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from mutant phenotype /// 0051489 // regulation of filopodium assembly // inferred from direct assay /// 2000286 // receptor internalization involved in canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043195 // terminal bouton // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay </td> <td> -207.05 </td> <td> 770.42 </td> <td> -4.60 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208685_x_at </td> <td> 208685_x_at </td> <td> AA902767 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA902767 /FEA=EST /DB_XREF=gi:3037890 /DB_XREF=est:ok72a04.s1 /CLONE=IMAGE:1519470 /UG=Hs.75243 bromodomain-containing 2 /FL=gb:NM_005104.2 gb:M80613.1 gb:D42040.1 </td> <td> AA902767 </td> <td> bromodomain containing 2 </td> <td> BRD2 </td> <td> 6046 </td> <td> NM_001113182 /// NM_001199455 /// NM_001199456 /// NM_001291986 /// NM_005104 /// NR_037625 /// XR_241911 /// XR_246967 /// XR_247375 /// XR_247406 /// XR_247427 </td> <td> 0006334 // nucleosome assembly // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0007283 // spermatogenesis // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0070577 // lysine-acetylated histone binding // inferred from direct assay </td> <td> -123.85 </td> <td> 365.93 </td> <td> -4.60 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209307_at </td> <td> 209307_at </td> <td> AB014540 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB014540.1 /DEF=Homo sapiens mRNA for KIAA0640 protein, partial cds. /FEA=mRNA /GEN=KIAA0640 /PROD=KIAA0640 protein /DB_XREF=gi:3327093 /UG=Hs.153026 SWAP-70 protein /FL=gb:BC000616.1 gb:AF210818.1 </td> <td> AB014540 </td> <td> SWAP switching B-cell complex 70kDa subunit </td> <td> SWAP70 </td> <td> 23075 </td> <td> NM_015055 /// XM_005252829 /// XM_005252830 </td> <td> 0016444 // somatic cell DNA recombination // inferred from electronic annotation /// 0045190 // isotype switching // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> 105.42 </td> <td> 323.74 </td> <td> 4.59 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212184_s_at </td> <td> 212184_s_at </td> <td> AL117407 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL117407.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434D2050 (from clone DKFZp434D2050); partial cds.  /FEA=mRNA /GEN=DKFZp434D2050 /PROD=hypothetical protein /DB_XREF=gi:5911992 /UG=Hs.109727 TAK1-binding protein 2; KIAA0733 protein </td> <td> AL117407 </td> <td> TGF-beta activated kinase 1/MAP3K7 binding protein 2 </td> <td> TAB2 </td> <td> 23118 </td> <td> NM_001292034 /// NM_001292035 /// NM_015093 /// NM_145342 /// XM_006715403 </td> <td> 0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0007507 // heart development // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070530 // K63-linked polyubiquitin binding // inferred from direct assay </td> <td> -80.75 </td> <td> 170.25 </td> <td> -4.59 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217373_x_at </td> <td> 217373_x_at </td> <td> AJ276888 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AJ276888.1 /DEF=Homo sapiens non-productive mRNA for p53-binding protein, alternatively spliced variant DS2 (MDM2 gene).  /FEA=CDS /GEN=MDM2 /PROD=p53-binding protein /DB_XREF=gi:7327962 /UG=Hs.272346 Homo sapiens non-productive mRNA for p53-binding protein, alternatively spliced variant DS2 (MDM2 gene) </td> <td> AJ276888 </td> <td> MDM2 proto-oncogene, E3 ubiquitin protein ligase </td> <td> MDM2 </td> <td> 4193 </td> <td> NM_001145336 /// NM_001145337 /// NM_001145339 /// NM_001145340 /// NM_001278462 /// NM_002392 /// NM_006878 /// NM_006879 /// NM_006880 /// NM_006881 /// NM_006882 /// NM_032739 /// XM_005268872 /// XM_006719399 /// XM_006719400 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006461 // protein complex assembly // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007089 // traversing start control point of mitotic cell cycle // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0009743 // response to carbohydrate // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010955 // negative regulation of protein processing // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0018205 // peptidyl-lysine modification // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from direct assay /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045184 // establishment of protein localization // inferred from direct assay /// 0045472 // response to ether // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0046677 // response to antibiotic // inferred from expression pattern /// 0046827 // positive regulation of protein export from nucleus // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0071157 // negative regulation of cell cycle arrest // inferred from direct assay /// 0071229 // cellular response to acid // inferred from electronic annotation /// 0071236 // cellular response to antibiotic // inferred from electronic annotation /// 0071301 // cellular response to vitamin B1 // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071312 // cellular response to alkaloid // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0071391 // cellular response to estrogen stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071494 // cellular response to UV-C // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0043234 // protein complex // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0002039 // p53 binding // inferred from physical interaction /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042975 // peroxisome proliferator activated receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0097110 // scaffold protein binding // inferred from electronic annotation </td> <td> -60.32 </td> <td> 63.21 </td> <td> -4.59 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204992_s_at </td> <td> 204992_s_at </td> <td> NM_002628 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002628.1 /DEF=Homo sapiens profilin 2 (PFN2), mRNA. /FEA=mRNA /GEN=PFN2 /PROD=profilin 2 /DB_XREF=gi:4505750 /UG=Hs.91747 profilin 2 /FL=gb:L10678.1 gb:NM_002628.1 </td> <td> NM_002628 </td> <td> profilin 2 </td> <td> PFN2 </td> <td> 5217 </td> <td> NM_002628 /// NM_053024 </td> <td> 0008064 // regulation of actin polymerization or depolymerization // non-traceable author statement /// 0010633 // negative regulation of epithelial cell migration // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030837 // negative regulation of actin filament polymerization // inferred from direct assay /// 0030838 // positive regulation of actin filament polymerization // inferred from genetic interaction /// 0032233 // positive regulation of actin filament bundle assembly // inferred from mutant phenotype /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from mutant phenotype /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 1900028 // negative regulation of ruffle assembly // inferred from mutant phenotype /// 2000300 // regulation of synaptic vesicle exocytosis // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // non-traceable author statement /// 0043195 // terminal bouton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000774 // adenyl-nucleotide exchange factor activity // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // non-traceable author statement /// 0003785 // actin monomer binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay </td> <td> 176.43 </td> <td> 720.74 </td> <td> 4.59 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 214459_x_at </td> <td> 214459_x_at </td> <td> M12679 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:M12679.1 /DEF=Human Cw1 antigen mRNA, complete cds. /FEA=mRNA /GEN=HLA-C /DB_XREF=gi:187911 /UG=Hs.274485 Cw1 antigen /FL=gb:M12679.1 </td> <td> M12679 </td> <td> major histocompatibility complex, class I, C </td> <td> HLA-C </td> <td> 3107 </td> <td> NM_001243042 /// NM_002117 </td> <td> 0001539 // cilium or flagellum-dependent cell motility // non-traceable author statement /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002486 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent // inferred from direct assay /// 0006955 // immune response // non-traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005102 // receptor binding // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0032395 // MHC class II receptor activity // non-traceable author statement /// 0042605 // peptide antigen binding // not recorded /// 0042605 // peptide antigen binding // inferred from direct assay /// 0042605 // peptide antigen binding // inferred from sequence or structural similarity /// 0046977 // TAP binding // inferred from direct assay </td> <td> -278.95 </td> <td> 682.42 </td> <td> -4.59 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209118_s_at </td> <td> 209118_s_at </td> <td> AF141347 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF141347.1 /DEF=Homo sapiens hum-a-tub2 alpha-tubulin mRNA, complete cds. /FEA=mRNA /PROD=alpha-tubulin /DB_XREF=gi:4929133 /UG=Hs.272897 Tubulin, alpha, brain-specific /FL=gb:AF141347.1 gb:NM_006009.1 </td> <td> AF141347 </td> <td> tubulin, alpha 1a </td> <td> TUBA1A </td> <td> 7846 </td> <td> NM_001270399 /// NM_001270400 /// NM_006009 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // traceable author statement /// 0030705 // cytoskeleton-dependent intracellular transport // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051301 // cell division // traceable author statement /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 793.25 </td> <td> 2680.10 </td> <td> 4.59 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201242_s_at </td> <td> 201242_s_at </td> <td> BC000006 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000006.1 /DEF=Homo sapiens, ATPase, Na+K+ transporting, beta 1 polypeptide, clone MGC:1798, mRNA, complete cds.  /FEA=mRNA /PROD=ATPase, Na+K+ transporting, beta 1 polypeptide /DB_XREF=gi:12652534 /UG=Hs.78629 ATPase, Na+K+ transporting, beta 1 polypeptide /FL=gb:BC000006.1 gb:NM_001677.1 </td> <td> BC000006 </td> <td> ATPase, Na+/K+ transporting, beta 1 polypeptide </td> <td> ATP1B1 </td> <td> 481 </td> <td> NM_001001787 /// NM_001677 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030001 // metal ion transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005890 // sodium:potassium-exchanging ATPase complex // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005391 // sodium:potassium-exchanging ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0023026 // MHC class II protein complex binding // inferred from direct assay </td> <td> -214.10 </td> <td> 449.12 </td> <td> -4.59 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204334_at </td> <td> 204334_at </td> <td> AA488672 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA488672 /FEA=EST /DB_XREF=gi:2216103 /DB_XREF=est:ab40d10.s1 /CLONE=IMAGE:843283 /UG=Hs.21599 Kruppel-like factor 7 (ubiquitous) /FL=gb:AB015132.1 gb:NM_003709.1 </td> <td> AA488672 </td> <td> Kruppel-like factor 7 (ubiquitous) </td> <td> KLF7 </td> <td> 8609 </td> <td> NM_001270942 /// NM_001270943 /// NM_001270944 /// NM_003709 /// NR_073108 /// XM_005246926 /// XM_006712815 /// XM_006712816 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -188.68 </td> <td> 263.46 </td> <td> -4.59 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213127_s_at </td> <td> 213127_s_at </td> <td> BG230758 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG230758 /FEA=EST /DB_XREF=gi:12725810 /DB_XREF=est:naf39f08.x1 /CLONE=IMAGE:4143495 /UG=Hs.301756 ESTs, Weakly similar to T31475 hypothetical protein Y62F5A.1b - Caenorhabditis elegans C.elegans </td> <td> BG230758 </td> <td> mediator complex subunit 8 </td> <td> MED8 </td> <td> 112950 </td> <td> NM_001001653 /// NM_052877 /// NM_201542 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // inferred from direct assay </td> <td> 0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 48.82 </td> <td> 61.41 </td> <td> 4.59 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 222036_s_at </td> <td> 222036_s_at </td> <td> AI859865 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI859865 /FEA=EST /DB_XREF=gi:5513481 /DB_XREF=est:wm21f03.x1 /CLONE=IMAGE:2436605 /UG=Hs.154443 minichromosome maintenance deficient (S. cerevisiae) 4 </td> <td> AI859865 </td> <td> minichromosome maintenance complex component 4 </td> <td> MCM4 </td> <td> 4173 </td> <td> NM_005914 /// NM_182746 /// XM_005251234 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006268 // DNA unwinding involved in DNA replication // inferred from electronic annotation /// 0006270 // DNA replication initiation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0015979 // photosynthesis // inferred from electronic annotation /// 0015995 // chlorophyll biosynthetic process // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0042555 // MCM complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016851 // magnesium chelatase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> 96.80 </td> <td> 93.75 </td> <td> 4.59 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212213_x_at </td> <td> 212213_x_at </td> <td> AB011139 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB011139.1 /DEF=Homo sapiens mRNA for KIAA0567 protein, partial cds. /FEA=mRNA /GEN=KIAA0567 /PROD=KIAA0567 protein /DB_XREF=gi:3043657 /UG=Hs.147946 optic atrophy 1 (autosomal dominant) </td> <td> AB011139 </td> <td> optic atrophy 1 (autosomal dominant) </td> <td> OPA1 </td> <td> 4976 </td> <td> NM_015560 /// NM_130831 /// NM_130832 /// NM_130833 /// NM_130834 /// NM_130835 /// NM_130836 /// NM_130837 </td> <td> 0000266 // mitochondrial fission // traceable author statement /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0007005 // mitochondrion organization // non-traceable author statement /// 0007007 // inner mitochondrial membrane organization // inferred from direct assay /// 0007601 // visual perception // inferred from mutant phenotype /// 0008053 // mitochondrial fusion // inferred from direct assay /// 0008053 // mitochondrial fusion // inferred from mutant phenotype /// 0008053 // mitochondrial fusion // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0019896 // axon transport of mitochondrion // traceable author statement /// 0050896 // response to stimulus // inferred from electronic annotation /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0090398 // cellular senescence // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // non-traceable author statement /// 0005758 // mitochondrial intermembrane space // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030061 // mitochondrial crista // inferred from direct assay /// 0030425 // dendrite // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // non-traceable author statement /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 97.63 </td> <td> 193.04 </td> <td> 4.59 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 210793_s_at </td> <td> 210793_s_at </td> <td> U41815 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U41815.1 /DEF=Human nucleoporin 98 (NUP98) mRNA, complete cds. /FEA=mRNA /GEN=NUP98 /PROD=nucleoporin 98 /DB_XREF=gi:1184172 /UG=Hs.112255 nucleoporin 98kD /FL=gb:U41815.1 </td> <td> U41815 </td> <td> nucleoporin 98kDa </td> <td> NUP98 </td> <td> 4928 </td> <td> NM_005387 /// NM_016320 /// NM_139131 /// NM_139132 /// XM_005252950 /// XM_006718240 /// XM_006718241 /// XM_006718242 /// XR_428845 </td> <td> 0000059 // protein import into nucleus, docking // non-traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006260 // DNA replication // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // traceable author statement /// 0006999 // nuclear pore organization // non-traceable author statement /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051292 // nuclear pore complex assembly // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031080 // nuclear pore outer ring // non-traceable author statement /// 0031965 // nuclear membrane // inferred from direct assay /// 0034399 // nuclear periphery // inferred from direct assay /// 0042405 // nuclear inclusion body // inferred from direct assay /// 0044615 // nuclear pore nuclear basket // inferred from direct assay </td> <td> 0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017056 // structural constituent of nuclear pore // inferred from mutant phenotype /// 0017056 // structural constituent of nuclear pore // non-traceable author statement /// 0042277 // peptide binding // inferred from electronic annotation </td> <td> 39.35 </td> <td> 48.17 </td> <td> 4.58 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 210776_x_at </td> <td> 210776_x_at </td> <td> M31222 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M31222.1 /DEF=Human e12 protein (E2A) mRNA, complete cds. /FEA=mRNA /GEN=TCF3 /DB_XREF=gi:181905 /UG=Hs.101047 transcription factor 3 (E2A immunoglobulin enhancer binding factors E12E47) /FL=gb:M31222.1 </td> <td> M31222 </td> <td> transcription factor 3 </td> <td> TCF3 </td> <td> 6929 </td> <td> NM_001136139 /// NM_003200 /// XM_005259620 /// XM_006722852 /// XM_006722853 /// XM_006722854 /// XM_006722855 /// XM_006722856 /// XM_006722857 /// XM_006722858 /// XM_006722859 /// XM_006722860 /// XM_006722861 /// XM_006722862 /// XM_006722863 /// XR_430150 /// XR_430151 /// XR_430152 /// XR_430153 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from direct assay /// 0002326 // B cell lineage commitment // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030098 // lymphocyte differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030183 // B cell differentiation // non-traceable author statement /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043966 // histone H3 acetylation // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048468 // cell development // inferred from electronic annotation /// 0048541 // Peyer's patch development // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 2000045 // regulation of G1/S transition of mitotic cell cycle // inferred from direct assay </td> <td> 0000788 // nuclear nucleosome // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from physical interaction /// 0035326 // enhancer binding // inferred by curator /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction /// 0070644 // vitamin D response element binding // inferred from direct assay /// 0070888 // E-box binding // inferred from direct assay /// 0070888 // E-box binding // inferred from sequence or structural similarity </td> <td> -104.27 </td> <td> 265.54 </td> <td> -4.58 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 216202_s_at </td> <td> 216202_s_at </td> <td> U15555 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U15555.1 /DEF=Human serine palmitoyltransferase (LCB2) mRNA, partial cds. /FEA=mRNA /GEN=LCB2 /PROD=serine palmitoyltransferase /DB_XREF=gi:1001944 /UG=Hs.59403 serine palmitoyltransferase, long chain base subunit 2 </td> <td> U15555 </td> <td> serine palmitoyltransferase, long chain base subunit 2 </td> <td> SPTLC2 </td> <td> 9517 </td> <td> NM_004863 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006686 // sphingomyelin biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046511 // sphinganine biosynthetic process // inferred from electronic annotation /// 0046512 // sphingosine biosynthetic process // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0017059 // serine C-palmitoyltransferase complex // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation </td> <td> -92.85 </td> <td> 112.67 </td> <td> -4.58 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 211000_s_at </td> <td> 211000_s_at </td> <td> AB015706 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB015706.1 /DEF=Homo sapiens mRNA for gp130 of the rheumatoid arthritis antigenic peptide-bearing soluble form (gp130-RAPS), complete cds.  /FEA=mRNA /GEN=gp130 /PROD=gp130 of the rheumatoid arthritis antigenicpeptide-bearing soluble form (gp130-RAPS) /DB_XREF=gi:4972293 /UG=Hs.82065 interleukin 6 signal transducer (gp130, oncostatin M receptor) /FL=gb:AB015706.1 </td> <td> AB015706 </td> <td> interleukin 6 signal transducer </td> <td> IL6ST </td> <td> 3572 </td> <td> NM_001190981 /// NM_002184 /// NM_175767 /// NR_120480 /// XM_005248496 </td> <td> 0002675 // positive regulation of acute inflammatory response // inferred by curator /// 0002821 // positive regulation of adaptive immune response // inferred by curator /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008593 // regulation of Notch signaling pathway // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0034097 // response to cytokine // inferred from direct assay /// 0038154 // interleukin-11-mediated signaling pathway // inferred from electronic annotation /// 0038165 // oncostatin-M-mediated signaling pathway // inferred from mutant phenotype /// 0042102 // positive regulation of T cell proliferation // inferred from mutant phenotype /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048861 // leukemia inhibitory factor signaling pathway // inferred from genetic interaction /// 0070102 // interleukin-6-mediated signaling pathway // inferred from mutant phenotype /// 0070104 // negative regulation of interleukin-6-mediated signaling pathway // inferred from direct assay /// 0070106 // interleukin-27-mediated signaling pathway // inferred from mutant phenotype /// 0070120 // ciliary neurotrophic factor-mediated signaling pathway // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005896 // interleukin-6 receptor complex // inferred from direct assay /// 0005900 // oncostatin-M receptor complex // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070110 // ciliary neurotrophic factor receptor complex // inferred from direct assay </td> <td> 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004897 // ciliary neurotrophic factor receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from genetic interaction /// 0004921 // interleukin-11 receptor activity // inferred from electronic annotation /// 0004923 // leukemia inhibitory factor receptor activity // inferred from genetic interaction /// 0004924 // oncostatin-M receptor activity // inferred from direct assay /// 0005127 // ciliary neurotrophic factor receptor binding // inferred from physical interaction /// 0005138 // interleukin-6 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from physical interaction /// 0019970 // interleukin-11 binding // inferred from electronic annotation /// 0019981 // interleukin-6 binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // traceable author statement /// 0045509 // interleukin-27 receptor activity // inferred by curator </td> <td> -176.32 </td> <td> 247.96 </td> <td> -4.58 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 219547_at </td> <td> 219547_at </td> <td> NM_004376 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004376.1 /DEF=Homo sapiens COX15 (yeast) homolog, cytochrome c oxidase assembly protein (COX15), mRNA.  /FEA=mRNA /GEN=COX15 /PROD=COX15 (yeast) homolog, cytochrome c oxidaseassembly protein /DB_XREF=gi:4758035 /UG=Hs.226581 COX15 (yeast) homolog, cytochrome c oxidase assembly protein /FL=gb:AF044323.1 gb:NM_004376.1 </td> <td> NM_004376 </td> <td> cytochrome c oxidase assembly homolog 15 (yeast) </td> <td> COX15 </td> <td> 1355 </td> <td> NM_004376 /// NM_078470 /// XM_005269539 /// XM_006717633 /// XM_006717634 </td> <td> 0006123 // mitochondrial electron transport, cytochrome c to oxygen // inferred by curator /// 0006778 // porphyrin-containing compound metabolic process // traceable author statement /// 0006783 // heme biosynthetic process // traceable author statement /// 0006784 // heme a biosynthetic process // inferred from electronic annotation /// 0006784 // heme a biosynthetic process // inferred from genetic interaction /// 0007585 // respiratory gaseous exchange // traceable author statement /// 0008535 // respiratory chain complex IV assembly // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0045333 // cellular respiration // inferred by curator /// 0055114 // oxidation-reduction process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from genetic interaction /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004129 // cytochrome-c oxidase activity // inferred from genetic interaction /// 0004129 // cytochrome-c oxidase activity // traceable author statement /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation </td> <td> 34.80 </td> <td> 83.20 </td> <td> 4.58 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 218420_s_at </td> <td> 218420_s_at </td> <td> NM_025138 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025138.1 /DEF=Homo sapiens hypothetical protein FLJ12661 (FLJ12661), mRNA. /FEA=mRNA /GEN=FLJ12661 /PROD=hypothetical protein FLJ12661 /DB_XREF=gi:13376720 /UG=Hs.318526 hypothetical protein FLJ12661 /FL=gb:NM_025138.1 </td> <td> NM_025138 </td> <td> proline and serine rich 1 </td> <td> PROSER1 </td> <td> 80209 </td> <td> NM_025138 /// NM_170719 /// XM_005266545 </td> <td>  </td> <td>  </td> <td>  </td> <td> -63.07 </td> <td> 132.84 </td> <td> -4.58 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 214911_s_at </td> <td> 214911_s_at </td> <td> S78771 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:S78771.1 /DEF=NAT=CpG island-associated gene human, mRNA, 1741 nt. /FEA=mRNA /DB_XREF=gi:244232 /UG=Hs.75243 bromodomain-containing 2 </td> <td> S78771 </td> <td> bromodomain containing 2 </td> <td> BRD2 </td> <td> 6046 </td> <td> NM_001113182 /// NM_001199455 /// NM_001199456 /// NM_001291986 /// NM_005104 /// NR_037625 /// XR_241911 /// XR_246967 /// XR_247375 /// XR_247406 /// XR_247427 </td> <td> 0006334 // nucleosome assembly // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0007283 // spermatogenesis // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0070577 // lysine-acetylated histone binding // inferred from direct assay </td> <td> -66.93 </td> <td> 255.76 </td> <td> -4.58 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204341_at </td> <td> 204341_at </td> <td> NM_006470 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006470.1 /DEF=Homo sapiens estrogen-responsive B box protein (EBBP), mRNA. /FEA=mRNA /GEN=EBBP /PROD=estrogen-responsive B box protein /DB_XREF=gi:5453643 /UG=Hs.241305 estrogen-responsive B box protein /FL=gb:AF096870.1 gb:NM_006470.1 </td> <td> NM_006470 </td> <td> tripartite motif containing 16 </td> <td> TRIM16 </td> <td> 10626 </td> <td> NM_006470 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from expression pattern /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0045618 // positive regulation of keratinocyte differentiation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0046683 // response to organophosphorus // inferred from expression pattern /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from mutant phenotype /// 0060416 // response to growth hormone // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019966 // interleukin-1 binding // inferred from physical interaction /// 0032089 // NACHT domain binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -54.32 </td> <td> 140.96 </td> <td> -4.57 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203301_s_at </td> <td> 203301_s_at </td> <td> NM_021145 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021145.1 /DEF=Homo sapiens cyclin D binding Myb-like transcription factor 1 (DMTF), mRNA.  /FEA=mRNA /GEN=DMTF /PROD=cyclin D binding Myb-like transcription factor1 /DB_XREF=gi:10863946 /UG=Hs.5671 cyclin D binding Myb-like transcription factor 1 /FL=gb:NM_021145.1 gb:AF084530.1 </td> <td> NM_021145 </td> <td> cyclin D binding myb-like transcription factor 1 </td> <td> DMTF1 </td> <td> 9988 </td> <td> NM_001142326 /// NM_001142327 /// NM_021145 /// NR_024549 /// NR_024550 /// XM_005250734 /// XM_006716197 /// XM_006716198 /// XM_006716199 /// XM_006716200 /// XM_006716201 /// XM_006716202 /// XM_006716203 /// XM_006716204 /// XM_006716205 /// XM_006716206 /// XR_428190 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement </td> <td> 71.33 </td> <td> 97.36 </td> <td> 4.57 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209042_s_at </td> <td> 209042_s_at </td> <td> BC001738 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001738.1 /DEF=Homo sapiens, Similar to ubiquitin-conjugating enzyme E2G 2 (homologous to yeast UBC7), clone MGC:1589, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to ubiquitin-conjugating enzyme E2G 2(homologous to yeast UBC7) /DB_XREF=gi:12804628 /UG=Hs.192853 ubiquitin-conjugating enzyme E2G 2 (homologous to yeast UBC7) /FL=gb:BC001738.1 gb:AF032456.1 gb:NM_003343.1 </td> <td> BC001738 </td> <td> ubiquitin-conjugating enzyme E2G 2 </td> <td> UBE2G2 </td> <td> 7327 </td> <td> NM_001202489 /// NM_003343 /// NM_182688 </td> <td> 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // inferred from mutant phenotype /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> 49.83 </td> <td> 69.26 </td> <td> 4.57 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202529_at </td> <td> 202529_at </td> <td> NM_002766 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002766.1 /DEF=Homo sapiens phosphoribosyl pyrophosphate synthetase-associated protein 1 (PRPSAP1), mRNA.  /FEA=mRNA /GEN=PRPSAP1 /PROD=phosphoribosyl pyrophosphatesynthetase-associated protein 1 /DB_XREF=gi:4506130 /UG=Hs.77498 phosphoribosyl pyrophosphate synthetase-associated protein 1 /FL=gb:D61391.1 gb:NM_002766.1 </td> <td> NM_002766 </td> <td> phosphoribosyl pyrophosphate synthetase-associated protein 1 </td> <td> PRPSAP1 </td> <td> 5635 </td> <td> NM_002766 </td> <td> 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0033673 // negative regulation of kinase activity // inferred from electronic annotation </td> <td> 0002189 // ribose phosphate diphosphokinase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004749 // ribose phosphate diphosphokinase activity // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // traceable author statement /// 0019900 // kinase binding // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation </td> <td> 71.53 </td> <td> 325.19 </td> <td> 4.57 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201507_at </td> <td> 201507_at </td> <td> NM_002622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002622.2 /DEF=Homo sapiens prefoldin 1 (PFDN1), mRNA. /FEA=mRNA /GEN=PFDN1 /PROD=prefoldin 1 /DB_XREF=gi:12408673 /UG=Hs.132881 prefoldin 1 /FL=gb:NM_002622.2 </td> <td> NM_002622 </td> <td> prefoldin subunit 1 </td> <td> PFDN1 </td> <td> 5201 </td> <td> NM_002622 /// XM_005268465 </td> <td> 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0007049 // cell cycle // traceable author statement /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0042113 // B cell activation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0016272 // prefoldin complex // inferred from electronic annotation </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -56.32 </td> <td> 301.09 </td> <td> -4.57 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 219155_at </td> <td> 219155_at </td> <td> NM_012417 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012417.1 /DEF=Homo sapiens retinal degeneration B beta (RDGBB), mRNA. /FEA=mRNA /GEN=RDGBB /PROD=retinal degeneration B beta /DB_XREF=gi:6912623 /UG=Hs.109219 retinal degeneration B beta /FL=gb:AF171102.1 gb:NM_012417.1 </td> <td> NM_012417 </td> <td> phosphatidylinositol transfer protein, cytoplasmic 1 </td> <td> PITPNC1 </td> <td> 26207 </td> <td> NM_012417 /// NM_181671 /// XM_005257216 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0015914 // phospholipid transport // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0008526 // phosphatidylinositol transporter activity // inferred from mutant phenotype </td> <td> -38.10 </td> <td> 73.65 </td> <td> -4.57 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201867_s_at </td> <td> 201867_s_at </td> <td> AW968555 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW968555 /FEA=EST /DB_XREF=gi:8158396 /DB_XREF=est:EST380631 /UG=Hs.76536 transducin (beta)-like 1 /FL=gb:NM_005647.1 </td> <td> AW968555 </td> <td> transducin (beta)-like 1X-linked </td> <td> TBL1X </td> <td> 6907 </td> <td> NM_001139466 /// NM_001139467 /// NM_001139468 /// NM_005647 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006508 // proteolysis // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0043627 // response to estrogen // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from genetic interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay </td> <td> -38.77 </td> <td> 70.14 </td> <td> -4.57 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204571_x_at </td> <td> 204571_x_at </td> <td> BE797213 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE797213 /FEA=EST /DB_XREF=gi:10218411 /DB_XREF=est:601587854F1 /CLONE=IMAGE:3942276 /UG=Hs.11774 protein (peptidyl-prolyl cistrans isomerase) NIMA-interacting, 4 (parvulin) /FL=gb:BC005234.1 gb:AF143096.1 gb:AB009690.1 gb:NM_006223.1 </td> <td> BE797213 </td> <td> protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) </td> <td> PIN4 </td> <td> 5303 </td> <td> NM_001170747 /// NM_006223 /// NR_033187 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006457 // protein folding // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030684 // preribosome // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003681 // bent DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 83.15 </td> <td> 185.15 </td> <td> 4.56 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 220079_s_at </td> <td> 220079_s_at </td> <td> NM_018391 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018391.1 /DEF=Homo sapiens hypothetical protein FLJ11328 (FLJ11328), mRNA. /FEA=mRNA /GEN=FLJ11328 /PROD=hypothetical protein FLJ11328 /DB_XREF=gi:8922996 /UG=Hs.178518 hypothetical protein FLJ11328 /FL=gb:NM_018391.1 </td> <td> NM_018391 </td> <td> ubiquitin specific peptidase 48 </td> <td> USP48 </td> <td> 84196 </td> <td> NM_001032730 /// NM_032236 /// XM_005246009 /// XM_005246010 /// XM_006710949 /// XM_006710950 /// XM_006710951 /// XM_006710952 /// XM_006710953 /// XM_006710954 /// XM_006710955 /// XM_006710956 /// XR_426634 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation </td> <td> 185.35 </td> <td> 371.15 </td> <td> 4.56 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 211962_s_at </td> <td> 211962_s_at </td> <td> BG250310 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG250310 /FEA=EST /DB_XREF=gi:12760126 /DB_XREF=est:602362443F1 /CLONE=IMAGE:4470898 /UG=Hs.85155 butyrate response factor 1 (EGF-response factor 1) </td> <td> BG250310 </td> <td> ZFP36 ring finger protein-like 1 </td> <td> ZFP36L1 </td> <td> 677 </td> <td> NM_001244698 /// NM_001244701 /// NM_004926 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -144.28 </td> <td> 382.86 </td> <td> -4.56 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 221535_at </td> <td> 221535_at </td> <td> AL136897 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136897.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434E248 (from clone DKFZp434E248); complete cds.  /FEA=mRNA /GEN=DKFZp434E248 /PROD=hypothetical protein /DB_XREF=gi:12053290 /UG=Hs.301724 Homo sapiens mRNA; cDNA DKFZp434E248 (from clone DKFZp434E248); complete cds /FL=gb:AL136897.1 </td> <td> AL136897 </td> <td> large 60S subunit nuclear export GTPase 1 </td> <td> LSG1 </td> <td> 55341 </td> <td> NM_018385 </td> <td> 0006184 // GTP catabolic process // not recorded /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0042254 // ribosome biogenesis // not recorded /// 0051168 // nuclear export // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // not recorded /// 0015030 // Cajal body // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 73.23 </td> <td> 149.71 </td> <td> 4.56 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204467_s_at </td> <td> 204467_s_at </td> <td> NM_000345 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000345.2 /DEF=Homo sapiens synuclein, alpha (non A4 component of amyloid precursor) (SNCA), transcript variant NACP140, mRNA.  /FEA=mRNA /GEN=SNCA /PROD=alpha-synuclein isoform NACP140 /DB_XREF=gi:6806896 /UG=Hs.76930 synuclein, alpha (non A4 component of amyloid precursor) /FL=gb:L08850.1 gb:NM_000345.2 </td> <td> NM_000345 </td> <td> synuclein, alpha (non A4 component of amyloid precursor) </td> <td> SNCA </td> <td> 6622 </td> <td> NM_000345 /// NM_001146054 /// NM_001146055 /// NM_007308 </td> <td> 0001774 // microglial cell activation // inferred from electronic annotation /// 0001921 // positive regulation of receptor recycling // inferred from direct assay /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001956 // positive regulation of neurotransmitter secretion // inferred from electronic annotation /// 0001963 // synaptic transmission, dopaminergic // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006638 // neutral lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007006 // mitochondrial membrane organization // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0010040 // response to iron(II) ion // inferred from direct assay /// 0010517 // regulation of phospholipase activity // inferred from direct assay /// 0010642 // negative regulation of platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0014048 // regulation of glutamate secretion // inferred from electronic annotation /// 0014059 // regulation of dopamine secretion // traceable author statement /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0031623 // receptor internalization // inferred from direct assay /// 0031648 // protein destabilization // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from direct assay /// 0032410 // negative regulation of transporter activity // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032769 // negative regulation of monooxygenase activity // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from direct assay /// 0034599 // cellular response to oxidative stress // inferred from electronic annotation /// 0035067 // negative regulation of histone acetylation // inferred from direct assay /// 0040012 // regulation of locomotion // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042416 // dopamine biosynthetic process // traceable author statement /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042775 // mitochondrial ATP synthesis coupled electron transport // inferred from electronic annotation /// 0043030 // regulation of macrophage activation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043206 // extracellular fibril organization // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from direct assay /// 0045920 // negative regulation of exocytosis // inferred from mutant phenotype /// 0045963 // negative regulation of dopamine metabolic process // inferred from electronic annotation /// 0046928 // regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048148 // behavioral response to cocaine // inferred from electronic annotation /// 0048168 // regulation of neuronal synaptic plasticity // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048488 // synaptic vesicle endocytosis // inferred from sequence or structural similarity /// 0048489 // synaptic vesicle transport // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0050812 // regulation of acyl-CoA biosynthetic process // inferred from electronic annotation /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051583 // dopamine uptake involved in synaptic transmission // traceable author statement /// 0051585 // negative regulation of dopamine uptake involved in synaptic transmission // inferred from direct assay /// 0051612 // negative regulation of serotonin uptake // inferred from direct assay /// 0051622 // negative regulation of norepinephrine uptake // inferred from direct assay /// 0055074 // calcium ion homeostasis // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0060732 // positive regulation of inositol phosphate biosynthetic process // inferred from direct assay /// 0070495 // negative regulation of thrombin receptor signaling pathway // inferred from direct assay /// 0070555 // response to interleukin-1 // inferred from direct assay /// 0071280 // cellular response to copper ion // inferred from direct assay /// 0071872 // cellular response to epinephrine stimulus // traceable author statement /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 1901214 // regulation of neuron death // inferred from genetic interaction </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016234 // inclusion body // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030426 // growth cone // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // inferred from direct assay /// 0043195 // terminal bouton // inferred from electronic annotation /// 0043205 // fibril // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0005504 // fatty acid binding // inferred from direct assay /// 0005507 // copper ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008198 // ferrous iron binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0019894 // kinesin binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0043014 // alpha-tubulin binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0045502 // dynein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0050544 // arachidonic acid binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from direct assay /// 0060961 // phospholipase D inhibitor activity // inferred from direct assay </td> <td> 56.77 </td> <td> 71.66 </td> <td> 4.56 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 48531_at </td> <td> 48531_at </td> <td> AA522816 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AA522816:ni40e12.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-979342 /clone_end=3' /gb=AA522816 /gi=2263528 /ug=Hs.173789 /len=564 </td> <td> AA522816 </td> <td> TNFAIP3 interacting protein 2 </td> <td> TNIP2 </td> <td> 79155 </td> <td> NM_001161527 /// NM_001292016 /// NM_024309 /// XM_005248010 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0023035 // CD40 signaling pathway // inferred from sequence or structural similarity /// 0034134 // toll-like receptor 2 signaling pathway // inferred from sequence or structural similarity /// 0034138 // toll-like receptor 3 signaling pathway // inferred from sequence or structural similarity /// 0034162 // toll-like receptor 9 signaling pathway // inferred from sequence or structural similarity /// 0043032 // positive regulation of macrophage activation // inferred from sequence or structural similarity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050871 // positive regulation of B cell activation // inferred from sequence or structural similarity /// 0070498 // interleukin-1-mediated signaling pathway // inferred from sequence or structural similarity /// 0071222 // cellular response to lipopolysaccharide // inferred from sequence or structural similarity /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from direct assay /// 0031593 // polyubiquitin binding // inferred from direct assay </td> <td> -59.08 </td> <td> 186.16 </td> <td> -4.56 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 200605_s_at </td> <td> 200605_s_at </td> <td> NM_002734 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002734.1 /DEF=Homo sapiens protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) (PRKAR1A), mRNA.  /FEA=mRNA /GEN=PRKAR1A /PROD=protein kinase, cAMP-dependent, regulatory, typeI, alpha /DB_XREF=gi:4506062 /UG=Hs.183037 protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) /FL=gb:M18468.1 gb:M33336.1 gb:NM_002734.1 </td> <td> NM_002734 </td> <td> protein kinase, cAMP-dependent, regulatory, type I, alpha </td> <td> PRKAR1A </td> <td> 5573 </td> <td> NM_001276289 /// NM_001276290 /// NM_001278433 /// NM_002734 /// NM_212471 /// NM_212472 </td> <td> 0001707 // mesoderm formation // inferred from electronic annotation /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007143 // female meiotic division // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045835 // negative regulation of meiosis // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060038 // cardiac muscle cell proliferation // inferred from electronic annotation /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 2000480 // negative regulation of cAMP-dependent protein kinase activity // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005952 // cAMP-dependent protein kinase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031588 // AMP-activated protein kinase complex // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0034236 // protein kinase A catalytic subunit binding // inferred from physical interaction </td> <td> 130.38 </td> <td> 612.04 </td> <td> 4.55 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202502_at </td> <td> 202502_at </td> <td> NM_000016 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000016.1 /DEF=Homo sapiens acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain (ACADM), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=ACADM /PROD=acyl-Coenzyme A dehydrogenase, C-4 to C-12straight chain proenzyme /DB_XREF=gi:4557230 /UG=Hs.79158 acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain /FL=gb:BC005377.1 gb:M16827.1 gb:NM_000016.1 gb:AF251043.1 </td> <td> NM_000016 </td> <td> acyl-CoA dehydrogenase, C-4 to C-12 straight chain </td> <td> ACADM </td> <td> 34 </td> <td> NM_000016 /// NM_001127328 /// NM_001286042 /// NM_001286043 /// NM_001286044 /// NR_022013 </td> <td> 0001889 // liver development // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0006082 // organic acid metabolic process // inferred from electronic annotation /// 0006111 // regulation of gluconeogenesis // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from mutant phenotype /// 0006635 // fatty acid beta-oxidation // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0009437 // carnitine metabolic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0019254 // carnitine metabolic process, CoA-linked // inferred from mutant phenotype /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from direct assay /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from mutant phenotype /// 0042594 // response to starvation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045329 // carnitine biosynthetic process // inferred from mutant phenotype /// 0051791 // medium-chain fatty acid metabolic process // inferred from direct assay /// 0051793 // medium-chain fatty acid catabolic process // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0030424 // axon // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003995 // acyl-CoA dehydrogenase activity // inferred from direct assay /// 0003995 // acyl-CoA dehydrogenase activity // inferred from mutant phenotype /// 0003995 // acyl-CoA dehydrogenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0070991 // medium-chain-acyl-CoA dehydrogenase activity // inferred from direct assay </td> <td> 88.10 </td> <td> 173.25 </td> <td> 4.55 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 219821_s_at </td> <td> 219821_s_at </td> <td> NM_018988 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018988.1 /DEF=Homo sapiens hypothetical protein (FLJ20330), mRNA. /FEA=mRNA /GEN=FLJ20330 /PROD=hypothetical protein /DB_XREF=gi:9506674 /UG=Hs.61485 hypothetical protein /FL=gb:NM_018988.1 </td> <td> NM_018988 </td> <td> glucose-fructose oxidoreductase domain containing 1 </td> <td> GFOD1 </td> <td> 54438 </td> <td> NM_001242628 /// NM_001242629 /// NM_001242630 /// NM_018988 /// NM_033069 /// NR_038459 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation </td> <td> 0016491 // oxidoreductase activity // inferred from electronic annotation </td> <td> 62.58 </td> <td> 113.46 </td> <td> 4.55 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 211776_s_at </td> <td> 211776_s_at </td> <td> BC006141 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006141.1 /DEF=Homo sapiens, Similar to erythrocyte protein band 4.1-like 3, clone MGC:13087, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to erythrocyte protein band 4.1-like 3 /DB_XREF=gi:13544008 /FL=gb:BC006141.1 </td> <td> BC006141 </td> <td> erythrocyte membrane protein band 4.1-like 3 </td> <td> EPB41L3 </td> <td> 23136 </td> <td> NM_001281533 /// NM_001281534 /// NM_001281535 /// NM_012307 /// XM_005258085 /// XM_005258086 /// XM_005258087 /// XM_005258088 /// XM_005258089 /// XM_005258090 /// XM_005258091 /// XM_006722301 /// XM_006722302 /// XM_006722303 /// XM_006722304 /// XM_006722305 /// XM_006722306 /// XM_006722307 /// XM_006722308 /// XM_006722309 /// XM_006722310 /// XM_006722311 /// XM_006722312 /// XM_006722313 /// XM_006722314 /// XM_006722315 /// XM_006722316 </td> <td> 0002175 // protein localization to paranode region of axon // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007016 // cytoskeletal anchoring at plasma membrane // traceable author statement /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0030865 // cortical cytoskeleton organization // traceable author statement /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0030913 // paranodal junction assembly // inferred from sequence or structural similarity /// 0043217 // myelin maintenance // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0071205 // protein localization to juxtaparanode region of axon // inferred from sequence or structural similarity /// 0072659 // protein localization to plasma membrane // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030673 // axolemma // inferred from sequence or structural similarity /// 0033270 // paranode region of axon // inferred from sequence or structural similarity /// 0044224 // juxtaparanode region of axon // inferred from sequence or structural similarity </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation </td> <td> -91.42 </td> <td> 164.54 </td> <td> -4.55 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 219006_at </td> <td> 219006_at </td> <td> NM_014165 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014165.1 /DEF=Homo sapiens HSPC125 protein (HSPC125), mRNA. /FEA=mRNA /GEN=HSPC125 /PROD=HSPC125 protein /DB_XREF=gi:7661785 /UG=Hs.5232 HSPC125 protein /FL=gb:AF060508.1 gb:AF161474.1 gb:NM_014165.1 </td> <td> NM_014165 </td> <td> NADH dehydrogenase (ubiquinone) complex I, assembly factor 4 </td> <td> NDUFAF4 </td> <td> 29078 </td> <td> NM_014165 </td> <td> 0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation </td> <td> 55.43 </td> <td> 190.11 </td> <td> 4.55 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217791_s_at </td> <td> 217791_s_at </td> <td> NM_002860 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002860.1 /DEF=Homo sapiens pyrroline-5-carboxylate synthetase (glutamate gamma-semialdehyde synthetase) (PYCS), mRNA.  /FEA=mRNA /GEN=PYCS /PROD=pyrroline-5-carboxylate synthetase (glutamategamma-semialdehyde synthetase) /DB_XREF=gi:4506348 /UG=Hs.114366 pyrroline-5-carboxylate synthetase (glutamate gamma-semialdehyde synthetase) /FL=gb:U68758.1 gb:U76542.1 gb:NM_002860.1 </td> <td> NM_002860 </td> <td> aldehyde dehydrogenase 18 family, member A1 </td> <td> ALDH18A1 </td> <td> 5832 </td> <td> NM_001017423 /// NM_002860 /// XM_006717933 </td> <td> 0006536 // glutamate metabolic process // inferred from mutant phenotype /// 0006561 // proline biosynthetic process // inferred from mutant phenotype /// 0006592 // ornithine biosynthetic process // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019240 // citrulline biosynthetic process // inferred from mutant phenotype /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055129 // L-proline biosynthetic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004349 // glutamate 5-kinase activity // inferred from direct assay /// 0004350 // glutamate-5-semialdehyde dehydrogenase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 94.28 </td> <td> 234.91 </td> <td> 4.54 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212825_at </td> <td> 212825_at </td> <td> AI357401 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI357401 /FEA=EST /DB_XREF=gi:4109022 /DB_XREF=est:qy13d06.x1 /CLONE=IMAGE:2011883 /UG=Hs.173854 PAX transcription activation domain interacting protein 1 like </td> <td> AI357401 </td> <td> PAX interacting (with transcription-activation domain) protein 1 </td> <td> PAXIP1 </td> <td> 22976 </td> <td> NM_007349 /// XM_005249536 /// XM_005249537 /// XM_005249539 /// XM_005249541 </td> <td> 0000416 // positive regulation of histone H3-K36 methylation // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from direct assay /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0031398 // positive regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0035066 // positive regulation of histone acetylation // inferred from sequence or structural similarity /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0045830 // positive regulation of isotype switching // inferred from sequence or structural similarity /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from sequence or structural similarity /// 0060261 // positive regulation of transcription initiation from RNA polymerase II promoter // inferred from mutant phenotype /// 0060261 // positive regulation of transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0060717 // chorion development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 40.20 </td> <td> 95.90 </td> <td> 4.54 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203010_at </td> <td> 203010_at </td> <td> NM_003152 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003152.1 /DEF=Homo sapiens signal transducer and activator of transcription 5A (STAT5A), mRNA.  /FEA=mRNA /GEN=STAT5A /PROD=signal transducer and activator of transcription5A /DB_XREF=gi:4507256 /UG=Hs.167503 signal transducer and activator of transcription 5A /FL=gb:U43185.1 gb:NM_003152.1 gb:L41142.1 </td> <td> NM_003152 </td> <td> signal transducer and activator of transcription 5A </td> <td> STAT5A </td> <td> 6776 </td> <td> NM_001288718 /// NM_001288719 /// NM_001288720 /// NM_003152 /// XM_005257624 </td> <td> 0000255 // allantoin metabolic process // inferred from sequence or structural similarity /// 0001553 // luteinization // inferred from electronic annotation /// 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0006101 // citrate metabolic process // inferred from sequence or structural similarity /// 0006103 // 2-oxoglutarate metabolic process // inferred from sequence or structural similarity /// 0006105 // succinate metabolic process // inferred from sequence or structural similarity /// 0006107 // oxaloacetate metabolic process // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006549 // isoleucine metabolic process // inferred from sequence or structural similarity /// 0006573 // valine metabolic process // inferred from sequence or structural similarity /// 0006600 // creatine metabolic process // inferred from sequence or structural similarity /// 0006631 // fatty acid metabolic process // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // traceable author statement /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019218 // regulation of steroid metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0019530 // taurine metabolic process // inferred from sequence or structural similarity /// 0019915 // lipid storage // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030856 // regulation of epithelial cell differentiation // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0032825 // positive regulation of natural killer cell differentiation // inferred from electronic annotation /// 0033026 // negative regulation of mast cell apoptotic process // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0038161 // prolactin signaling pathway // inferred from sequence or structural similarity /// 0040014 // regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from electronic annotation /// 0045579 // positive regulation of B cell differentiation // inferred from electronic annotation /// 0045588 // positive regulation of gamma-delta T cell differentiation // inferred from electronic annotation /// 0045621 // positive regulation of lymphocyte differentiation // inferred from electronic annotation /// 0045647 // negative regulation of erythrocyte differentiation // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from electronic annotation /// 0046449 // creatinine metabolic process // inferred from sequence or structural similarity /// 0046543 // development of secondary female sexual characteristics // inferred from electronic annotation /// 0046544 // development of secondary male sexual characteristics // inferred from electronic annotation /// 0048541 // Peyer's patch development // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0060376 // positive regulation of mast cell differentiation // inferred from electronic annotation /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0060742 // epithelial cell differentiation involved in prostate gland development // inferred from electronic annotation /// 0061180 // mammary gland epithelium development // inferred from electronic annotation /// 0070668 // positive regulation of mast cell proliferation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -54.77 </td> <td> 94.71 </td> <td> -4.54 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201142_at </td> <td> 201142_at </td> <td> AA577698 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA577698 /FEA=EST /DB_XREF=gi:2355882 /DB_XREF=est:nn22h05.s1 /CLONE=IMAGE:1084665 /UG=Hs.151777 eukaryotic translation initiation factor 2, subunit 1 (alpha, 35kD ) /FL=gb:BC002513.1 gb:J02645.1 gb:NM_004094.1 </td> <td> AA577698 </td> <td> eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa </td> <td> EIF2S1 </td> <td> 1965 </td> <td> NM_004094 </td> <td> 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0043558 // regulation of translational initiation in response to stress // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0046777 // protein autophosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005844 // polysome // traceable author statement /// 0005850 // eukaryotic translation initiation factor 2 complex // inferred from electronic annotation /// 0005851 // eukaryotic translation initiation factor 2B complex // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 173.22 </td> <td> 231.29 </td> <td> 4.54 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 210734_x_at </td> <td> 210734_x_at </td> <td> M64240 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M64240.1 /DEF=Human helix-loop-helix zipper protein (max) mRNA, complete cds. /FEA=mRNA /GEN=max; max /PROD=helix-loop-helix zipper protein; helix-loop-helix zipper protein /DB_XREF=gi:187390 /UG=Hs.42712 MAX protein /FL=gb:BC004516.1 gb:M64240.1 </td> <td> M64240 </td> <td> MYC associated factor X </td> <td> MAX </td> <td> 4149 </td> <td> NM_001271068 /// NM_001271069 /// NM_002382 /// NM_145112 /// NM_145113 /// NM_145114 /// NM_145116 /// NM_197957 /// NR_073137 /// NR_073138 /// XR_429315 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -55.70 </td> <td> 101.67 </td> <td> -4.53 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217958_at </td> <td> 217958_at </td> <td> NM_016146 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016146.1 /DEF=Homo sapiens PTD009 protein (PTD009), mRNA. /FEA=mRNA /GEN=PTD009 /PROD=PTD009 protein /DB_XREF=gi:7706666 /UG=Hs.279901 PTD009 protein /FL=gb:AF151862.1 gb:AF078862.1 gb:AF161520.1 gb:NM_016146.1 </td> <td> NM_016146 </td> <td> microRNA 3656 /// trafficking protein particle complex 4 </td> <td> MIR3656 /// TRAPPC4 </td> <td> 51399 /// 100500840 </td> <td> NM_016146 /// NR_037429 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016358 // dendrite development // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from sequence or structural similarity /// 0005801 // cis-Golgi network // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0030008 // TRAPP complex // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 77.40 </td> <td> 292.15 </td> <td> 4.53 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208415_x_at </td> <td> 208415_x_at </td> <td> NM_005537 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005537.1 /DEF=Homo sapiens inhibitor of growth 1 family, member 1 (ING1), mRNA. /FEA=mRNA /GEN=ING1 /PROD=inhibitor of growth 1 family, member 1 /DB_XREF=gi:5031792 /UG=Hs.46700 inhibitor of growth 1 family, member 1 /FL=gb:AF001954.1 gb:NM_005537.1 </td> <td> NM_005537 </td> <td> inhibitor of growth family, member 1 </td> <td> ING1 </td> <td> 3621 </td> <td> NM_001267728 /// NM_005537 /// NM_198217 /// NM_198218 /// NM_198219 </td> <td> 0006606 // protein import into nucleus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010941 // regulation of cell death // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035064 // methylated histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -64.03 </td> <td> 91.39 </td> <td> -4.53 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208923_at </td> <td> 208923_at </td> <td> BC005097 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005097.1 /DEF=Homo sapiens, Similar to selective hybridizing clone, clone MGC:13167, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to selective hybridizing clone /DB_XREF=gi:13477256 /UG=Hs.77257 KIAA0068 protein /FL=gb:BC005097.1 </td> <td> BC005097 </td> <td> cytoplasmic FMR1 interacting protein 1 </td> <td> CYFIP1 </td> <td> 23191 </td> <td> NM_001033028 /// NM_001287810 /// NM_014608 /// XM_005272543 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // inferred from mutant phenotype /// 0030032 // lamellipodium assembly // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031529 // ruffle organization // inferred from sequence or structural similarity /// 0048675 // axon extension // inferred from mutant phenotype /// 0050890 // cognition // inferred from mutant phenotype /// 2000601 // positive regulation of Arp2/3 complex-mediated actin nucleation // inferred from mutant phenotype </td> <td> 0001726 // ruffle // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005845 // mRNA cap binding complex // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0031209 // SCAR complex // inferred from mutant phenotype /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from direct assay /// 0032403 // protein complex binding // inferred from mutant phenotype /// 0048365 // Rac GTPase binding // inferred from mutant phenotype /// 0048365 // Rac GTPase binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from sequence or structural similarity </td> <td> 67.70 </td> <td> 538.67 </td> <td> 4.52 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 207121_s_at </td> <td> 207121_s_at </td> <td> NM_002748 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002748.1 /DEF=Homo sapiens mitogen-activated protein kinase 6 (MAPK6), mRNA. /FEA=mRNA /GEN=MAPK6 /PROD=mitogen-activated protein kinase 6 /DB_XREF=gi:4506090 /UG=Hs.271980 mitogen-activated protein kinase 6 /FL=gb:L77964.1 gb:NM_002748.1 </td> <td> NM_002748 </td> <td> mitogen-activated protein kinase 6 </td> <td> MAPK6 </td> <td> 5597 </td> <td> NM_002748 /// XM_005254536 /// XM_005254537 /// XM_005254538 /// XM_005254539 </td> <td> 0000165 // MAPK cascade // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004707 // MAP kinase activity // inferred from sequence or structural similarity /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -71.22 </td> <td> 444.59 </td> <td> -4.52 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209884_s_at </td> <td> 209884_s_at </td> <td> AF047033 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF047033.1 /DEF=Homo sapiens sodium bicarbonate cotransporter 3 (SLC4A7) mRNA, complete cds.  /FEA=mRNA /GEN=SLC4A7 /PROD=sodium bicarbonate cotransporter 3 /DB_XREF=gi:5051627 /UG=Hs.132904 solute carrier family 4, sodium bicarbonate cotransporter, member 7 /FL=gb:AF047033.1 </td> <td> AF047033 </td> <td> solute carrier family 4, sodium bicarbonate cotransporter, member 7 </td> <td> SLC4A7 </td> <td> 9497 </td> <td> NM_001258379 /// NM_001258380 /// NM_003615 /// XM_005265598 /// XM_005265599 /// XM_005265600 /// XM_005265601 /// XM_006713421 /// XR_245166 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0015701 // bicarbonate transport // non-traceable author statement /// 0015701 // bicarbonate transport // traceable author statement /// 0021747 // cochlear nucleus development // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // non-traceable author statement /// 0046666 // retinal cell programmed cell death // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060117 // auditory receptor cell development // inferred from electronic annotation /// 0061299 // retina vasculature morphogenesis in camera-type eye // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0032420 // stereocilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005452 // inorganic anion exchanger activity // inferred from electronic annotation /// 0008509 // anion transmembrane transporter activity // inferred from electronic annotation /// 0008510 // sodium:bicarbonate symporter activity // non-traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation </td> <td> 84.95 </td> <td> 98.00 </td> <td> 4.52 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 218149_s_at </td> <td> 218149_s_at </td> <td> NM_017606 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017606.1 /DEF=Homo sapiens hypothetical protein DKFZp434K1210 (DKFZp434K1210), mRNA.  /FEA=mRNA /GEN=DKFZp434K1210 /PROD=hypothetical protein DKFZp434K1210 /DB_XREF=gi:8922146 /UG=Hs.32352 hypothetical protein DKFZp434K1210 /FL=gb:NM_017606.1 </td> <td> NM_017606 </td> <td> zinc finger protein 395 </td> <td> ZNF395 </td> <td> 55893 </td> <td> NM_018660 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred by curator </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -43.10 </td> <td> 49.23 </td> <td> -4.52 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 200995_at </td> <td> 200995_at </td> <td> AI741392 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI741392 /FEA=EST /DB_XREF=gi:5109680 /DB_XREF=est:wg27b08.x1 /CLONE=IMAGE:2366295 /UG=Hs.5151 RAN binding protein 7 /FL=gb:AF098799.1 gb:NM_006391.1 </td> <td> AI741392 </td> <td> importin 7 </td> <td> IPO7 </td> <td> 10527 </td> <td> NM_006391 </td> <td> 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0005083 // small GTPase regulator activity // traceable author statement /// 0005215 // transporter activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from electronic annotation </td> <td> 57.92 </td> <td> 172.51 </td> <td> 4.51 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 221478_at </td> <td> 221478_at </td> <td> AL132665 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL132665.1 /DEF=Homo sapiens mRNA; cDNA DKFZp566E034 (from clone DKFZp566E034); complete cds.  /FEA=mRNA /DB_XREF=gi:6137021 /UG=Hs.132955 BCL2adenovirus E1B 19kD-interacting protein 3-like /FL=gb:AF060922.1 gb:AB004788.1 gb:AF067396.1 gb:NM_004331.1 gb:AL132665.1 </td> <td> AL132665 </td> <td> BCL2/adenovirus E1B 19kDa interacting protein 3-like </td> <td> BNIP3L </td> <td> 665 </td> <td> NM_004331 /// XM_005273617 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0051607 // defense response to virus // inferred from direct assay /// 0097345 // mitochondrial outer membrane permeabilization // not recorded </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031224 // intrinsic component of membrane // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay </td> <td> -95.55 </td> <td> 309.27 </td> <td> -4.51 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202581_at </td> <td> 202581_at </td> <td> NM_005346 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005346.2 /DEF=Homo sapiens heat shock 70kD protein 1B (HSPA1B), mRNA. /FEA=mRNA /GEN=HSPA1B /PROD=heat shock 70kD protein 1B /DB_XREF=gi:5579470 /UG=Hs.274402 heat shock 70kD protein 1B /FL=gb:NM_005346.2 </td> <td> NM_005346 </td> <td> heat shock 70kDa protein 1A /// heat shock 70kDa protein 1B </td> <td> HSPA1A /// HSPA1B </td> <td> 3303 /// 3304 </td> <td> NM_005345 /// NM_005346 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006402 // mRNA catabolic process // inferred from direct assay /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010941 // regulation of cell death // inferred from mutant phenotype /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0034605 // cellular response to heat // inferred from direct assay /// 0042026 // protein refolding // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0045648 // positive regulation of erythrocyte differentiation // inferred from mutant phenotype /// 0060548 // negative regulation of cell death // inferred from mutant phenotype /// 0070370 // cellular heat acclimation // inferred from mutant phenotype /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005814 // centriole // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008180 // COP9 signalosome // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001618 // virus receptor activity // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016887 // ATPase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042623 // ATPase activity, coupled // inferred from direct assay /// 0044183 // protein binding involved in protein folding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051082 // unfolded protein binding // traceable author statement </td> <td> 54.33 </td> <td> 57.66 </td> <td> 4.51 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 221637_s_at </td> <td> 221637_s_at </td> <td> BC001434 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001434.1 /DEF=Homo sapiens, clone MGC:2477, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:2477) /DB_XREF=gi:12655158 /UG=Hs.9061 hypothetical protein MGC2477 /FL=gb:BC001434.1 </td> <td> BC001434 </td> <td> chromosome 11 open reading frame 48 /// uncharacterized LOC102288414 </td> <td> C11orf48 /// LOC102288414 </td> <td> 79081 /// 102288414 </td> <td> NM_001286086 /// NM_024099 /// NR_104414 </td> <td>  </td> <td>  </td> <td>  </td> <td> 45.40 </td> <td> 80.42 </td> <td> 4.51 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217957_at </td> <td> 217957_at </td> <td> NM_013242 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013242.1 /DEF=Homo sapiens similar to mouse Glt3 or D. malanogaster transcription factor IIB (AF093680), mRNA.  /FEA=mRNA /GEN=AF093680 /PROD=similar to mouse Glt3 or D. malanogastertranscription factor IIB /DB_XREF=gi:8392874 /UG=Hs.279818 similar to mouse Glt3 or D. malanogaster transcription factor IIB /FL=gb:BC005152.1 gb:AF093680.1 gb:NM_013242.1 </td> <td> NM_013242 </td> <td> chromosome 16 open reading frame 80 </td> <td> C16orf80 </td> <td> 29105 </td> <td> NM_013242 </td> <td> 0007275 // multicellular organismal development // traceable author statement </td> <td> 0005929 // cilium // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 102.60 </td> <td> 343.95 </td> <td> 4.51 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209007_s_at </td> <td> 209007_s_at </td> <td> AF267856 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF267856.1 /DEF=Homo sapiens HT033 mRNA, complete cds. /FEA=mRNA /PROD=HT033 /DB_XREF=gi:12006038 /UG=Hs.8084 hypothetical protein dJ465N24.2.1 /FL=gb:AF247168.1 gb:AF267856.1 </td> <td> AF267856 </td> <td> uncharacterized LOC101928189 /// arginine/serine-rich protein 1 </td> <td> LOC101928189 /// RSRP1 </td> <td> 57035 /// 101928189 </td> <td> NM_020317 /// NM_207035 /// XR_241200 /// XR_241201 /// XR_241226 /// XR_248757 /// XR_250715 /// XR_425130 /// XR_426623 /// XR_426670 /// XR_431144 </td> <td>  </td> <td>  </td> <td>  </td> <td> 53.57 </td> <td> 75.26 </td> <td> 4.50 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201524_x_at </td> <td> 201524_x_at </td> <td> NM_003348 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003348.1 /DEF=Homo sapiens ubiquitin-conjugating enzyme E2N (homologous to yeast UBC13) (UBE2N), mRNA.  /FEA=mRNA /GEN=UBE2N /PROD=ubiquitin-conjugating enzyme E2N (homologous toyeast UBC13) /DB_XREF=gi:4507792 /UG=Hs.75355 ubiquitin-conjugating enzyme E2N (homologous to yeast UBC13) /FL=gb:D83004.1 gb:BC000396.1 gb:BC003365.1 gb:NM_003348.1 </td> <td> NM_003348 </td> <td> ubiquitin-conjugating enzyme E2N </td> <td> UBE2N </td> <td> 7334 </td> <td> NM_003348 </td> <td> 0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0000729 // DNA double-strand break processing // inferred from mutant phenotype /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006282 // regulation of DNA repair // traceable author statement /// 0006301 // postreplication repair // inferred from mutant phenotype /// 0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0016567 // protein ubiquitination // traceable author statement /// 0016574 // histone ubiquitination // inferred from mutant phenotype /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031058 // positive regulation of histone modification // inferred from mutant phenotype /// 0033182 // regulation of histone ubiquitination // inferred from mutant phenotype /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045739 // positive regulation of DNA repair // inferred from mutant phenotype /// 0050852 // T cell receptor signaling pathway // inferred from mutant phenotype /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051443 // positive regulation of ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0031372 // UBC13-MMS2 complex // inferred from direct assay /// 0035370 // UBC13-UEV1A complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0043130 // ubiquitin binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 165.68 </td> <td> 669.66 </td> <td> 4.50 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208974_x_at </td> <td> 208974_x_at </td> <td> BC003572 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003572.1 /DEF=Homo sapiens, karyopherin (importin) beta 1, clone MGC:2156, mRNA, complete cds.  /FEA=mRNA /PROD=karyopherin (importin) beta 1 /DB_XREF=gi:13097743 /UG=Hs.180446 karyopherin (importin) beta 1 /FL=gb:BC003572.1 gb:NM_002265.1 gb:L38951.1 </td> <td> BC003572 </td> <td> karyopherin (importin) beta 1 </td> <td> KPNB1 </td> <td> 3837 </td> <td> NM_001276453 /// NM_002265 </td> <td> 0000060 // protein import into nucleus, translocation // traceable author statement /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006610 // ribosomal protein import into nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071782 // endoplasmic reticulum tubular network // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008270 // zinc ion binding // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 286.07 </td> <td> 627.56 </td> <td> 4.50 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213507_s_at </td> <td> 213507_s_at </td> <td> BG249565 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG249565 /FEA=EST /DB_XREF=gi:12759381 /DB_XREF=est:602319636F1 /CLONE=IMAGE:4414881 /UG=Hs.180446 karyopherin (importin) beta 1 </td> <td> BG249565 </td> <td> karyopherin (importin) beta 1 </td> <td> KPNB1 </td> <td> 3837 </td> <td> NM_001276453 /// NM_002265 </td> <td> 0000060 // protein import into nucleus, translocation // traceable author statement /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006610 // ribosomal protein import into nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071782 // endoplasmic reticulum tubular network // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008270 // zinc ion binding // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 304.47 </td> <td> 786.99 </td> <td> 4.50 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 220235_s_at </td> <td> 220235_s_at </td> <td> NM_018372 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018372.1 /DEF=Homo sapiens hypothetical protein FLJ11269 (FLJ11269), mRNA. /FEA=mRNA /GEN=FLJ11269 /PROD=hypothetical protein FLJ11269 /DB_XREF=gi:8922961 /UG=Hs.25245 hypothetical protein FLJ11269 /FL=gb:NM_018372.1 </td> <td> NM_018372 </td> <td> ligand dependent nuclear receptor interacting factor 1 </td> <td> LRIF1 </td> <td> 55791 </td> <td> NM_001006945 /// NM_018372 /// XM_005271029 /// XM_006710763 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation </td> <td> 44.85 </td> <td> 103.83 </td> <td> 4.50 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202105_at </td> <td> 202105_at </td> <td> NM_001551 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001551.1 /DEF=Homo sapiens immunoglobulin (CD79A) binding protein 1 (IGBP1), mRNA.  /FEA=mRNA /GEN=IGBP1 /PROD=immunoglobulin-binding protein 1 /DB_XREF=gi:4557662 /UG=Hs.3631 immunoglobulin (CD79A) binding protein 1 /FL=gb:BC004137.1 gb:NM_001551.1 </td> <td> NM_001551 </td> <td> immunoglobulin (CD79A) binding protein 1 </td> <td> IGBP1 </td> <td> 3476 </td> <td> NM_001551 /// XR_430521 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0007165 // signal transduction // non-traceable author statement /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0032873 // negative regulation of stress-activated MAPK cascade // inferred from mutant phenotype /// 0034612 // response to tumor necrosis factor // inferred from mutant phenotype /// 0035306 // positive regulation of dephosphorylation // inferred from electronic annotation /// 0035308 // negative regulation of protein dephosphorylation // inferred from electronic annotation /// 0042113 // B cell activation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060632 // regulation of microtubule-based movement // inferred from mutant phenotype /// 0070555 // response to interleukin-1 // inferred from mutant phenotype /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // inferred from direct assay /// 0031434 // mitogen-activated protein kinase kinase binding // inferred from electronic annotation </td> <td> -73.50 </td> <td> 194.22 </td> <td> -4.49 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 205241_at </td> <td> 205241_at </td> <td> NM_005138 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005138.1 /DEF=Homo sapiens SCO (cytochrome oxidase deficient, yeast) homolog 2 (SCO2), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=SCO2 /PROD=SCO (cytochrome oxidase deficient, yeast)homolog 2 /DB_XREF=gi:4826991 /UG=Hs.278431 SCO (cytochrome oxidase deficient, yeast) homolog 2 /FL=gb:NM_005138.1 </td> <td> NM_005138 </td> <td> SCO2 cytochrome c oxidase assembly protein </td> <td> SCO2 </td> <td> 9997 </td> <td> NM_001169109 /// NM_001169110 /// NM_001169111 /// NM_005138 </td> <td> 0000002 // mitochondrial genome maintenance // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001654 // eye development // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0003012 // muscle system process // inferred from electronic annotation /// 0006206 // pyrimidine nucleobase metabolic process // inferred from electronic annotation /// 0006206 // pyrimidine nucleobase metabolic process // traceable author statement /// 0006213 // pyrimidine nucleoside metabolic process // inferred from electronic annotation /// 0006220 // pyrimidine nucleotide metabolic process // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006825 // copper ion transport // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008535 // respiratory chain complex IV assembly // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030261 // chromosome condensation // inferred from electronic annotation /// 0043097 // pyrimidine nucleoside salvage // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046135 // pyrimidine nucleoside catabolic process // traceable author statement /// 0055070 // copper ion homeostasis // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030016 // myofibril // inferred from direct assay </td> <td> 0004645 // phosphorylase activity // inferred from electronic annotation /// 0005161 // platelet-derived growth factor receptor binding // traceable author statement /// 0005507 // copper ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0009032 // thymidine phosphorylase activity // inferred from electronic annotation /// 0009032 // thymidine phosphorylase activity // traceable author statement /// 0016154 // pyrimidine-nucleoside phosphorylase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016763 // transferase activity, transferring pentosyl groups //  /// 0016763 // transferase activity, transferring pentosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 49.10 </td> <td> 67.90 </td> <td> 4.49 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203613_s_at </td> <td> 203613_s_at </td> <td> NM_002493 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002493.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6 (17kD, B17) (NDUFB6), mRNA.  /FEA=mRNA /GEN=NDUFB6 /PROD=NADH dehydrogenase (ubiquinone) 1 betasubcomplex, 6 (17kD, B17) /DB_XREF=gi:4505364 /UG=Hs.109646 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6 (17kD, B17) /FL=gb:AF035840.1 gb:NM_002493.1 gb:AF067167.1 </td> <td> NM_002493 </td> <td> NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa </td> <td> NDUFB6 </td> <td> 4712 </td> <td> NM_001199987 /// NM_002493 /// NM_182739 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> 86.95 </td> <td> 299.90 </td> <td> 4.49 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 36084_at </td> <td> 36084_at </td> <td> D38548 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. D38548:Human mRNA for KIAA0076 gene, complete cds /cds=(86,5182) /gb=D38548 /gi=559706 /ug=Hs.51039 /len=5253 </td> <td> D38548 </td> <td> cullin 7 </td> <td> CUL7 </td> <td> 9820 </td> <td> NM_001168370 /// NM_014780 /// XM_005249503 /// XM_006715285 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0000281 // mitotic cytokinesis // inferred from mutant phenotype /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001837 // epithelial to mesenchymal transition // inferred from direct assay /// 0001890 // placenta development // inferred from direct assay /// 0006508 // proteolysis // non-traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007088 // regulation of mitosis // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050775 // positive regulation of dendrite morphogenesis // inferred from genetic interaction /// 0050775 // positive regulation of dendrite morphogenesis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005680 // anaphase-promoting complex // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from electronic annotation /// 0031467 // Cul7-RING ubiquitin ligase complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 1990393 // 3M complex // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation </td> <td> 39.65 </td> <td> 100.40 </td> <td> 4.49 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209427_at </td> <td> 209427_at </td> <td> AF064238 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF064238.3 /DEF=Homo sapiens smoothelin large isoform L2 (SMTN) mRNA, complete cds. /FEA=mRNA /GEN=SMTN /PROD=smoothelin large isoform L2 /DB_XREF=gi:8119287 /UG=Hs.149098 smoothelin /FL=gb:AF064238.3 </td> <td> AF064238 </td> <td> smoothelin </td> <td> SMTN </td> <td> 6525 </td> <td> NM_001207017 /// NM_001207018 /// NM_006932 /// NM_134269 /// NM_134270 /// XM_006724298 /// XM_006724299 /// XM_006724300 /// XM_006724301 /// XM_006724302 /// XM_006724303 /// XM_006724304 /// XM_006724305 /// XM_006724306 /// XM_006724307 /// XR_430410 </td> <td> 0006939 // smooth muscle contraction // traceable author statement /// 0007517 // muscle organ development // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay </td> <td> 0003779 // actin binding // traceable author statement /// 0008307 // structural constituent of muscle // traceable author statement </td> <td> 53.43 </td> <td> 110.79 </td> <td> 4.49 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 218373_at </td> <td> 218373_at </td> <td> NM_022476 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022476.1 /DEF=Homo sapiens hypothetical protein FLJ13258 similar to fused toes (FLJ13258), mRNA.  /FEA=mRNA /GEN=FLJ13258 /PROD=hypothetical protein FLJ13258 similar to fusedtoes /DB_XREF=gi:11968026 /UG=Hs.288929 hypothetical protein FLJ13258 similar to fused toes /FL=gb:NM_022476.1 </td> <td> NM_022476 </td> <td> AKT interacting protein </td> <td> AKTIP </td> <td> 64400 </td> <td> NM_001012398 /// NM_022476 /// XM_005256094 /// XM_005256095 /// XM_005256096 /// XM_005256097 /// XM_005256098 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007032 // endosome organization // inferred from mutant phenotype /// 0007040 // lysosome organization // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030897 // HOPS complex // inferred from direct assay /// 0070695 // FHF complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019787 // small conjugating protein ligase activity // non-traceable author statement </td> <td> 40.73 </td> <td> 64.74 </td> <td> 4.49 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 208908_s_at </td> <td> 208908_s_at </td> <td> AF327443 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF327443.1 /DEF=Homo sapiens calpastatin mRNA, complete cds. /FEA=mRNA /PROD=calpastatin /DB_XREF=gi:12056961 /UG=Hs.279607 calpastatin /FL=gb:AF327443.1 gb:U26724.2 </td> <td> AF327443 </td> <td> calpastatin </td> <td> CAST </td> <td> 831 </td> <td> NM_001042440 /// NM_001042441 /// NM_001042442 /// NM_001042443 /// NM_001042444 /// NM_001042445 /// NM_001042446 /// NM_001190442 /// NM_001284212 /// NM_001284213 /// NM_001750 /// NM_173060 /// NM_173061 /// NM_173062 /// NM_173063 /// NR_033798 /// NR_104285 /// XM_006714696 /// XM_006714697 /// XM_006714698 /// XM_006714699 /// XM_006714700 /// XM_006714701 /// XM_006714702 /// XM_006714703 /// XM_006714704 /// XM_006714705 /// XM_006714706 /// XM_006714707 /// XM_006714708 /// XM_006714709 /// XM_006714710 /// XM_006714711 /// XM_006714712 /// XM_006714713 /// XM_006714714 /// XM_006714715 </td> <td> 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement /// 2000675 // negative regulation of type B pancreatic cell apoptotic process // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0010859 // calcium-dependent cysteine-type endopeptidase inhibitor activity // non-traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -72.00 </td> <td> 185.82 </td> <td> -4.48 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 219206_x_at </td> <td> 219206_x_at </td> <td> NM_016056 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016056.1 /DEF=Homo sapiens CGI-119 protein (LOC51643), mRNA. /FEA=mRNA /GEN=LOC51643 /PROD=CGI-119 protein /DB_XREF=gi:7706334 /UG=Hs.283670 CGI-119 protein /FL=gb:AF182041.1 gb:AF151877.1 gb:AF113127.1 gb:AF161526.1 gb:NM_016056.1 </td> <td> NM_016056 </td> <td> transmembrane BAX inhibitor motif containing 4 </td> <td> TMBIM4 </td> <td> 51643 </td> <td> NM_001282606 /// NM_001282609 /// NM_001282610 /// NM_016056 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0050848 // regulation of calcium-mediated signaling // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 99.97 </td> <td> 225.84 </td> <td> 4.48 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202080_s_at </td> <td> 202080_s_at </td> <td> NM_014965 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014965.1 /DEF=Homo sapiens KIAA1042 protein (KIAA1042), mRNA. /FEA=mRNA /GEN=KIAA1042 /PROD=KIAA1042 protein /DB_XREF=gi:7662457 /UG=Hs.6705 KIAA1042 protein /FL=gb:AB028965.1 gb:NM_014965.1 </td> <td> NM_014965 </td> <td> trafficking protein, kinesin binding 1 </td> <td> TRAK1 </td> <td> 22906 </td> <td> NM_001042646 /// NM_001265608 /// NM_001265609 /// NM_001265610 /// NM_014965 /// XM_005264956 /// XM_005264957 /// XM_005264958 /// XM_005264959 /// XM_005264960 /// XM_005264962 /// XM_005264963 /// XM_005264964 /// XM_006713028 /// XM_006713029 /// XM_006713030 /// XM_006713031 </td> <td> 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006493 // protein O-linked glycosylation // inferred from sequence or structural similarity /// 0006605 // protein targeting // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0050811 // GABA receptor binding // inferred from electronic annotation </td> <td> 75.78 </td> <td> 172.34 </td> <td> 4.48 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203497_at </td> <td> 203497_at </td> <td> NM_004774 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004774.1 /DEF=Homo sapiens PPAR binding protein (PPARBP), mRNA. /FEA=mRNA /GEN=PPARBP /PROD=thyroid hormone receptor interactor 2 /DB_XREF=gi:4759265 /UG=Hs.15589 PPAR binding protein /FL=gb:AF055994.1 gb:NM_004774.1 gb:AF283812.1 </td> <td> NM_004774 </td> <td> mediator complex subunit 1 </td> <td> MED1 </td> <td> 5469 </td> <td> NM_004774 /// XM_005257465 /// XM_006721957 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000902 // cell morphogenesis // inferred from mutant phenotype /// 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0002088 // lens development in camera-type eye // inferred from sequence or structural similarity /// 0002154 // thyroid hormone mediated signaling pathway // inferred from mutant phenotype /// 0003222 // ventricular trabecula myocardium morphogenesis // inferred from electronic annotation /// 0003406 // retinal pigment epithelium development // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006356 // regulation of transcription from RNA polymerase I promoter // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006590 // thyroid hormone generation // inferred from electronic annotation /// 0006702 // androgen biosynthetic process // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010839 // negative regulation of keratinocyte proliferation // inferred from mutant phenotype /// 0030216 // keratinocyte differentiation // inferred from mutant phenotype /// 0030224 // monocyte differentiation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0031100 // organ regeneration // inferred from electronic annotation /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0033601 // positive regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0035357 // peroxisome proliferator activated receptor signaling pathway // inferred from electronic annotation /// 0035729 // cellular response to hepatocyte growth factor stimulus // inferred from electronic annotation /// 0035855 // megakaryocyte development // inferred from sequence or structural similarity /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045444 // fat cell differentiation // inferred from direct assay /// 0045618 // positive regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0045665 // negative regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048821 // erythrocyte development // inferred from sequence or structural similarity /// 0048822 // enucleate erythrocyte development // inferred from electronic annotation /// 0051726 // regulation of cell cycle // non-traceable author statement /// 0060335 // positive regulation of interferon-gamma-mediated signaling pathway // inferred from electronic annotation /// 0060744 // mammary gland branching involved in thelarche // inferred from electronic annotation /// 0060745 // mammary gland branching involved in pregnancy // inferred from electronic annotation /// 0060750 // epithelial cell proliferation involved in mammary gland duct elongation // inferred from electronic annotation /// 0070318 // positive regulation of G0 to G1 transition // inferred from electronic annotation /// 0070371 // ERK1 and ERK2 cascade // inferred from direct assay /// 0070562 // regulation of vitamin D receptor signaling pathway // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from direct assay /// 0071383 // cellular response to steroid hormone stimulus // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from direct assay /// 2000273 // positive regulation of receptor activity // inferred from mutant phenotype /// 2000347 // positive regulation of hepatocyte proliferation // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from mutant phenotype </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from mutant phenotype /// 0032993 // protein-DNA complex // inferred from electronic annotation </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from sequence or structural similarity /// 0001047 // core promoter binding // inferred from direct assay /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from mutant phenotype /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0004872 // receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016922 // ligand-dependent nuclear receptor binding // inferred from direct assay /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0030375 // thyroid hormone receptor coactivator activity // inferred from mutant phenotype /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0035257 // nuclear hormone receptor binding // inferred from physical interaction /// 0036033 // mediator complex binding // inferred from direct assay /// 0042809 // vitamin D receptor binding // inferred from physical interaction /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0042809 // vitamin D receptor binding // traceable author statement /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042975 // peroxisome proliferator activated receptor binding // inferred from physical interaction /// 0046966 // thyroid hormone receptor binding // inferred from direct assay /// 0046966 // thyroid hormone receptor binding // inferred from physical interaction /// 0050693 // LBD domain binding // inferred from physical interaction </td> <td> 49.92 </td> <td> 84.81 </td> <td> 4.48 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203721_s_at </td> <td> 203721_s_at </td> <td> NM_016001 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016001.1 /DEF=Homo sapiens CGI-48 protein (LOC51096), mRNA. /FEA=mRNA /GEN=LOC51096 /PROD=CGI-48 protein /DB_XREF=gi:7705764 /UG=Hs.6153 CGI-48 protein /FL=gb:AF151806.1 gb:NM_016001.1 </td> <td> NM_016001 </td> <td> UTP18 small subunit (SSU) processome component homolog (yeast) </td> <td> UTP18 </td> <td> 51096 </td> <td> NM_016001 /// XM_006721930 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 68.67 </td> <td> 181.59 </td> <td> 4.48 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202506_at </td> <td> 202506_at </td> <td> NM_006751 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006751.1 /DEF=Homo sapiens sperm specific antigen 2 (SSFA2), mRNA. /FEA=mRNA /GEN=SSFA2 /PROD=sperm specific antigen 2 /DB_XREF=gi:5803178 /UG=Hs.82767 sperm specific antigen 2 /FL=gb:M61199.1 gb:NM_006751.1 </td> <td> NM_006751 </td> <td> sperm specific antigen 2 </td> <td> SSFA2 </td> <td> 6744 </td> <td> NM_001130445 /// NM_001287503 /// NM_001287504 /// NM_001287505 /// NM_006751 /// NR_109843 /// XM_005246812 /// XM_005246813 /// XR_241319 /// XR_241320 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation </td> <td> 83.00 </td> <td> 298.85 </td> <td> 4.48 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202967_at </td> <td> 202967_at </td> <td> NM_001512 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001512.1 /DEF=Homo sapiens glutathione S-transferase A4 (GSTA4), mRNA. /FEA=mRNA /GEN=GSTA4 /PROD=glutathione S-transferase A4 /DB_XREF=gi:4504172 /UG=Hs.169907 glutathione S-transferase A4 /FL=gb:AF020918.1 gb:AF025887.1 gb:NM_001512.1 gb:AF125271.1 gb:AF125272.1 gb:AF125273.1 </td> <td> NM_001512 </td> <td> glutathione S-transferase alpha 4 </td> <td> GSTA4 </td> <td> 2941 </td> <td> NM_001512 /// XM_005249035 </td> <td> 0006749 // glutathione metabolic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 1901687 // glutathione derivative biosynthetic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004364 // glutathione transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> 82.08 </td> <td> 214.44 </td> <td> 4.48 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 221514_at </td> <td> 221514_at </td> <td> BC001149 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001149.1 /DEF=Homo sapiens, Similar to KIAA0266 gene product, clone MGC:1291, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to KIAA0266 gene product /DB_XREF=gi:12654624 /UG=Hs.271926 serologically defined colon cancer antigen 16 /FL=gb:BC001149.1 </td> <td> BC001149 </td> <td> UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) </td> <td> UTP14A </td> <td> 10813 </td> <td> NM_001166221 /// NM_006649 /// XM_005262363 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0032040 // small-subunit processome // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 37.43 </td> <td> 68.16 </td> <td> 4.48 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 221753_at </td> <td> 221753_at </td> <td> AI651213 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI651213 /FEA=EST /DB_XREF=gi:4735192 /DB_XREF=est:wa98a11.x1 /CLONE=IMAGE:2304188 /UG=Hs.60377 KIAA1298 protein </td> <td> AI651213 </td> <td> slingshot protein phosphatase 1 </td> <td> SSH1 </td> <td> 54434 </td> <td> NM_001161330 /// NM_001161331 /// NM_018984 /// XM_005268984 /// XM_005268985 /// XM_005268986 /// XM_006719466 </td> <td> 0000902 // cell morphogenesis // inferred from mutant phenotype /// 0006470 // protein dephosphorylation // inferred from mutant phenotype /// 0008064 // regulation of actin polymerization or depolymerization // not recorded /// 0010591 // regulation of lamellipodium assembly // not recorded /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from mutant phenotype /// 0032268 // regulation of cellular protein metabolic process // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // not recorded /// 0071318 // cellular response to ATP // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from mutant phenotype /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> -333.95 </td> <td> 375.75 </td> <td> -4.47 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202214_s_at </td> <td> 202214_s_at </td> <td> NM_003588 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003588.1 /DEF=Homo sapiens cullin 4B (CUL4B), mRNA. /FEA=mRNA /GEN=CUL4B /PROD=cullin 4B /DB_XREF=gi:13270466 /UG=Hs.155976 cullin 4B /FL=gb:NM_003588.1 gb:AB014595.1 </td> <td> NM_003588 </td> <td> cullin 4B </td> <td> CUL4B </td> <td> 8450 </td> <td> NM_001079872 /// NM_003588 /// XM_005262481 /// XM_006724784 /// XM_006724785 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0070914 // UV-damage excision repair // inferred from direct assay /// 1900087 // positive regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from electronic annotation /// 0031465 // Cul4B-RING E3 ubiquitin ligase complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003684 // damaged DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation </td> <td> 105.88 </td> <td> 239.61 </td> <td> 4.47 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202067_s_at </td> <td> 202067_s_at </td> <td> AI861942 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI861942 /FEA=EST /DB_XREF=gi:5526049 /DB_XREF=est:td18b10.x1 /CLONE=IMAGE:2075995 /UG=Hs.213289 low density lipoprotein receptor (familial hypercholesterolemia) /FL=gb:NM_000527.2 </td> <td> AI861942 </td> <td> low density lipoprotein receptor </td> <td> LDLR </td> <td> 3949 </td> <td> NM_000527 /// NM_001195798 /// NM_001195799 /// NM_001195800 /// NM_001195802 /// NM_001195803 /// XR_244074 </td> <td> 0001523 // retinoid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0006897 // endocytosis // traceable author statement /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from sequence or structural similarity /// 0010899 // regulation of phosphatidylcholine catabolic process // inferred from sequence or structural similarity /// 0015914 // phospholipid transport // inferred from sequence or structural similarity /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030299 // intestinal cholesterol absorption // inferred from mutant phenotype /// 0030301 // cholesterol transport // inferred from mutant phenotype /// 0034383 // low-density lipoprotein particle clearance // inferred from mutant phenotype /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042159 // lipoprotein catabolic process // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0070508 // cholesterol import // inferred from sequence or structural similarity </td> <td> 0005764 // lysosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement /// 0034362 // low-density lipoprotein particle // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0001948 // glycoprotein binding // inferred from physical interaction /// 0005041 // low-density lipoprotein receptor activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030169 // low-density lipoprotein particle binding // inferred from electronic annotation /// 0030229 // very-low-density lipoprotein particle receptor activity // inferred from direct assay </td> <td> 54.02 </td> <td> 32.36 </td> <td> 4.47 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212435_at </td> <td> 212435_at </td> <td> AA205593 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA205593 /FEA=EST /DB_XREF=gi:1803601 /DB_XREF=est:zq68c06.s1 /CLONE=IMAGE:646762 /UG=Hs.26837 Homo sapiens mRNA; cDNA DKFZp586K1123 (from clone DKFZp586K1123) </td> <td> AA205593 </td> <td> tripartite motif containing 33 </td> <td> TRIM33 </td> <td> 51592 </td> <td> NM_015906 /// NM_033020 /// XM_005270936 /// XM_005270937 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070410 // co-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction </td> <td> 49.53 </td> <td> 47.04 </td> <td> 4.47 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203225_s_at </td> <td> 203225_s_at </td> <td> NM_018339 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018339.1 /DEF=Homo sapiens hypothetical protein FLJ11149 (FLJ11149), mRNA. /FEA=mRNA /GEN=FLJ11149 /PROD=hypothetical protein FLJ11149 /DB_XREF=gi:8922898 /UG=Hs.37558 hypothetical protein FLJ11149 /FL=gb:NM_018339.1 </td> <td> NM_018339 </td> <td> riboflavin kinase </td> <td> RFK </td> <td> 55312 </td> <td> NM_018339 </td> <td> 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006771 // riboflavin metabolic process // traceable author statement /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0009231 // riboflavin biosynthetic process // non-traceable author statement /// 0009398 // FMN biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0033864 // positive regulation of NAD(P)H oxidase activity // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008531 // riboflavin kinase activity // non-traceable author statement /// 0008531 // riboflavin kinase activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 63.03 </td> <td> 184.41 </td> <td> 4.47 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202725_at </td> <td> 202725_at </td> <td> NM_000937 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000937.1 /DEF=Homo sapiens polymerase (RNA) II (DNA directed) polypeptide A (220kD) (POLR2A), mRNA.  /FEA=mRNA /GEN=POLR2A /PROD=polymerase (RNA) II (DNA directed) polypeptide A(220kD) /DB_XREF=gi:4505938 /UG=Hs.171880 polymerase (RNA) II (DNA directed) polypeptide A (220kD) /FL=gb:NM_000937.1 </td> <td> NM_000937 </td> <td> polymerase (RNA) II (DNA directed) polypeptide A, 220kDa </td> <td> POLR2A </td> <td> 5430 </td> <td> NM_000937 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001172 // transcription, RNA-templated // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // non-traceable author statement /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0001055 // RNA polymerase II activity // not recorded /// 0003677 // DNA binding // non-traceable author statement /// 0003899 // DNA-directed RNA polymerase activity // non-traceable author statement /// 0003968 // RNA-directed RNA polymerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 51.47 </td> <td> 137.64 </td> <td> 4.47 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 209158_s_at </td> <td> 209158_s_at </td> <td> BC004361 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004361.1 /DEF=Homo sapiens, pleckstrin homology, Sec7 and coiledcoil domains 2 (cytohesin-2), clone MGC:642, mRNA, complete cds.  /FEA=mRNA /PROD=pleckstrin homology, Sec7 and coiledcoildomains 2 (cytohesin-2) /DB_XREF=gi:13279334 /UG=Hs.303091 pleckstrin homology, Sec7 and coiledcoil domains 2 (cytohesin-2) /FL=gb:NM_017457.2 gb:NM_004228.3 gb:BC004361.1 gb:U70728.1 </td> <td> BC004361 </td> <td> cytohesin 2 </td> <td> CYTH2 </td> <td> 9266 </td> <td> NM_004228 /// NM_017457 /// XM_006723472 /// XM_006723473 </td> <td> 0006897 // endocytosis // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0016192 // vesicle-mediated transport // not recorded /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030155 // regulation of cell adhesion // not recorded /// 0032012 // regulation of ARF protein signal transduction // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // not recorded /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from sequence or structural similarity /// 0043087 // regulation of GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity //  /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // traceable author statement </td> <td> 0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005802 // trans-Golgi network // not recorded /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // traceable author statement </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // not recorded /// 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0005178 // integrin binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0070679 // inositol 1,4,5 trisphosphate binding // inferred from sequence or structural similarity </td> <td> -56.02 </td> <td> 104.61 </td> <td> -4.47 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201121_s_at </td> <td> 201121_s_at </td> <td> NM_006667 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006667.2 /DEF=Homo sapiens progesterone binding protein (HPR6.6), mRNA. /FEA=mRNA /GEN=HPR6.6 /PROD=progesterone binding protein /DB_XREF=gi:6857798 /UG=Hs.90061 progesterone binding protein /FL=gb:NM_006667.2 </td> <td> NM_006667 </td> <td> progesterone receptor membrane component 1 </td> <td> PGRMC1 </td> <td> 10857 </td> <td> NM_001282621 /// NM_006667 </td> <td> 0007411 // axon guidance // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation </td> <td> 85.05 </td> <td> 397.00 </td> <td> 4.47 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 205398_s_at </td> <td> 205398_s_at </td> <td> NM_005902 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005902.1 /DEF=Homo sapiens MAD (mothers against decapentaplegic, Drosophila) homolog 3 (MADH3), mRNA.  /FEA=mRNA /GEN=MADH3 /PROD=MAD (mothers against decapentaplegic,Drosophila) homolog 3 /DB_XREF=gi:5174512 /UG=Hs.211578 MAD (mothers against decapentaplegic, Drosophila) homolog 3 /FL=gb:U76622.1 gb:U68019.1 gb:NM_005902.1 </td> <td> NM_005902 </td> <td> SMAD family member 3 </td> <td> SMAD3 </td> <td> 4088 </td> <td> NM_001145102 /// NM_001145103 /// NM_001145104 /// NM_005902 /// XM_006720506 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from mutant phenotype /// 0001947 // heart looping // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0002520 // immune system development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0006955 // immune response // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0007369 // gastrulation // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010694 // positive regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0016202 // regulation of striated muscle tissue development // inferred from electronic annotation /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0019049 // evasion or tolerance of host defenses by virus // inferred from direct assay /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0031053 // primary miRNA processing // traceable author statement /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032731 // positive regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032909 // regulation of transforming growth factor beta2 production // inferred from mutant phenotype /// 0032916 // positive regulation of transforming growth factor beta3 production // inferred from electronic annotation /// 0032924 // activin receptor signaling pathway // inferred from mutant phenotype /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0035413 // positive regulation of catenin import into nucleus // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0038092 // nodal signaling pathway // inferred from mutant phenotype /// 0042060 // wound healing // traceable author statement /// 0042110 // T cell activation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from mutant phenotype /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from mutant phenotype /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045930 // negative regulation of mitotic cell cycle // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0048340 // paraxial mesoderm morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048617 // embryonic foregut morphogenesis // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050776 // regulation of immune response // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0050927 // positive regulation of positive chemotaxis // inferred from electronic annotation /// 0051098 // regulation of binding // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from electronic annotation /// 0060039 // pericardium development // inferred from electronic annotation /// 0060290 // transdifferentiation // inferred from electronic annotation /// 0061045 // negative regulation of wound healing // inferred from electronic annotation /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 0097191 // extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 0097296 // activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway // inferred from electronic annotation /// 1901313 // positive regulation of gene expression involved in extracellular matrix organization // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005637 // nuclear inner membrane // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0043235 // receptor complex // inferred from mutant phenotype /// 0071141 // SMAD protein complex // inferred from direct assay /// 0071144 // SMAD2-SMAD3 protein complex // inferred from direct assay </td> <td> 0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000988 // protein binding transcription factor activity // inferred from direct assay /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005160 // transforming growth factor beta receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019902 // phosphatase binding // inferred from physical interaction /// 0030618 // transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity // inferred from direct assay /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035326 // enhancer binding // inferred by curator /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070410 // co-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction </td> <td> -123.68 </td> <td> 223.71 </td> <td> -4.47 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 201546_at </td> <td> 201546_at </td> <td> NM_004238 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004238.1 /DEF=Homo sapiens thyroid hormone receptor interactor 12 (TRIP12), mRNA. /FEA=mRNA /GEN=TRIP12 /PROD=thyroid hormone receptor interactor 12 /DB_XREF=gi:10863902 /UG=Hs.138617 thyroid hormone receptor interactor 12 /FL=gb:NM_004238.1 gb:D28476.1 </td> <td> NM_004238 </td> <td> thyroid hormone receptor interactor 12 </td> <td> TRIP12 </td> <td> 9320 </td> <td> NM_001284214 /// NM_001284215 /// NM_001284216 /// NM_004238 /// XM_005246954 /// XM_005246955 /// XM_005246956 /// XM_005246957 /// XM_005246958 /// XM_005246960 /// XM_005246961 /// XM_005246962 /// XM_005246963 /// XM_006712852 /// XM_006712853 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016567 // protein ubiquitination // non-traceable author statement /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 1901315 // negative regulation of histone H2A K63-linked ubiquitination // inferred from mutant phenotype /// 2000780 // negative regulation of double-strand break repair // inferred from mutant phenotype </td> <td> 0005634 // nucleus // not recorded /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // not recorded </td> <td> 0004842 // ubiquitin-protein transferase activity // not recorded /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // inferred from direct assay </td> <td> -86.07 </td> <td> 396.81 </td> <td> -4.47 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 218145_at </td> <td> 218145_at </td> <td> NM_021158 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021158.1 /DEF=Homo sapiens protein kinase domains containing protein similar to phosphoprotein C8FW (LOC57761), mRNA.  /FEA=mRNA /GEN=LOC57761 /PROD=protein kinase domains containing proteinsimilar to phosphoprotein C8FW /DB_XREF=gi:11056039 /UG=Hs.26802 protein kinase domains containing protein similar to phosphoprotein C8FW /FL=gb:NM_021158.1 </td> <td> NM_021158 </td> <td> tribbles pseudokinase 3 </td> <td> TRIB3 </td> <td> 57761 </td> <td> NM_021158 /// XM_005260773 /// XM_005260774 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010827 // regulation of glucose transport // inferred from sequence or structural similarity /// 0032092 // positive regulation of protein binding // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043405 // regulation of MAP kinase activity // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045717 // negative regulation of fatty acid biosynthetic process // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0051443 // positive regulation of ubiquitin-protein transferase activity // inferred from sequence or structural similarity /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from direct assay /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from direct assay /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0031625 // ubiquitin protein ligase binding // inferred from sequence or structural similarity /// 0055106 // ubiquitin-protein transferase regulator activity // inferred from sequence or structural similarity </td> <td> -280.20 </td> <td> 360.30 </td> <td> -4.47 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 213292_s_at </td> <td> 213292_s_at </td> <td> AA908770 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA908770 /FEA=EST /DB_XREF=gi:3048175 /DB_XREF=est:ol06a11.s1 /CLONE=IMAGE:1522652 /UG=Hs.283881 KIAA0713 protein </td> <td> AA908770 </td> <td> sorting nexin 13 </td> <td> SNX13 </td> <td> 23161 </td> <td> NM_015132 /// XM_005249672 /// XM_005249673 /// XM_005249674 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0007154 // cell communication // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay </td> <td> 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay </td> <td> -37.40 </td> <td> 108.30 </td> <td> -4.47 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 207643_s_at </td> <td> 207643_s_at </td> <td> NM_001065 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001065.1 /DEF=Homo sapiens tumor necrosis factor receptor superfamily, member 1A (TNFRSF1A), mRNA.  /FEA=mRNA /GEN=TNFRSF1A /PROD=tumor necrosis factor receptor 1 (55kD) /DB_XREF=gi:4507574 /UG=Hs.159 tumor necrosis factor receptor superfamily, member 1A /FL=gb:NM_001065.1 </td> <td> NM_001065 </td> <td> tumor necrosis factor receptor superfamily, member 1A </td> <td> TNFRSF1A </td> <td> 7132 </td> <td> NM_001065 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006952 // defense response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // traceable author statement /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009812 // flavonoid metabolic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016101 // diterpenoid metabolic process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032715 // negative regulation of interleukin-6 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0033013 // tetrapyrrole metabolic process // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from electronic annotation /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043200 // response to amino acid // inferred from electronic annotation /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0050728 // negative regulation of inflammatory response // inferred from mutant phenotype /// 0050729 // positive regulation of inflammatory response // inferred from sequence or structural similarity /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071392 // cellular response to estradiol stimulus // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from direct assay /// 0005576 // extracellular region // non-traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from electronic annotation /// 0005031 // tumor necrosis factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043120 // tumor necrosis factor binding // inferred from electronic annotation </td> <td> -117.02 </td> <td> 372.01 </td> <td> -4.47 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 217979_at </td> <td> 217979_at </td> <td> NM_014399 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014399.1 /DEF=Homo sapiens tetraspan NET-6 protein (NET-6), mRNA. /FEA=mRNA /GEN=NET-6 /PROD=tetraspan NET-6 protein /DB_XREF=gi:7657372 /UG=Hs.284243 tetraspan NET-6 protein /FL=gb:AF120265.1 gb:AF100759.1 gb:NM_014399.1 </td> <td> NM_014399 </td> <td> tetraspanin 13 </td> <td> TSPAN13 </td> <td> 27075 </td> <td> NM_014399 </td> <td>  </td> <td> 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 161.28 </td> <td> 400.31 </td> <td> 4.46 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212201_at </td> <td> 212201_at </td> <td> AW274877 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW274877 /FEA=EST /DB_XREF=gi:6661907 /DB_XREF=est:xm62a09.x1 /CLONE=IMAGE:2688760 /UG=Hs.100729 KIAA0692 protein </td> <td> AW274877 </td> <td> ankyrin repeat and LEM domain containing 2 </td> <td> ANKLE2 </td> <td> 23141 </td> <td> NM_015114 /// XM_005266159 /// XM_005266160 /// XM_005266161 /// XM_006719735 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007084 // mitotic nuclear envelope reassembly // inferred from mutant phenotype /// 0007084 // mitotic nuclear envelope reassembly // traceable author statement /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0050790 // regulation of catalytic activity // traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0051721 // protein phosphatase 2A binding // inferred from direct assay </td> <td> -48.28 </td> <td> 102.54 </td> <td> -4.46 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 204491_at </td> <td> 204491_at </td> <td> R40917 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:R40917 /FEA=EST /DB_XREF=gi:823119 /DB_XREF=est:yf75d09.s1 /CLONE=IMAGE:28220 /UG=Hs.172081 phosphodiesterase 4D, cAMP-specific (dunce (Drosophila)-homolog phosphodiesterase E3) /FL=gb:L20969.1 gb:U02882.1 gb:NM_006203.1 </td> <td> R40917 </td> <td> phosphodiesterase 4D, cAMP-specific </td> <td> PDE4D </td> <td> 5144 </td> <td> NM_001104631 /// NM_001165899 /// NM_001197218 /// NM_001197219 /// NM_001197220 /// NM_001197221 /// NM_001197222 /// NM_001197223 /// NM_006203 /// XM_005248537 /// XM_005248538 /// XM_005248540 /// XM_005248541 </td> <td> 0002027 // regulation of heart rate // inferred from sequence or structural similarity /// 0006198 // cAMP catabolic process // inferred from direct assay /// 0006198 // cAMP catabolic process // inferred from electronic annotation /// 0006198 // cAMP catabolic process // inferred from genetic interaction /// 0006198 // cAMP catabolic process // inferred from mutant phenotype /// 0006939 // smooth muscle contraction // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement /// 0010469 // regulation of receptor activity // inferred from sequence or structural similarity /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // inferred from sequence or structural similarity /// 0019933 // cAMP-mediated signaling // non-traceable author statement /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from mutant phenotype /// 0032743 // positive regulation of interleukin-2 production // inferred from mutant phenotype /// 0032754 // positive regulation of interleukin-5 production // inferred from mutant phenotype /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0045822 // negative regulation of heart contraction // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // inferred from mutant phenotype /// 0050900 // leukocyte migration // inferred from electronic annotation /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0061028 // establishment of endothelial barrier // inferred from sequence or structural similarity /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from direct assay /// 0071872 // cellular response to epinephrine stimulus // inferred from direct assay /// 0071872 // cellular response to epinephrine stimulus // inferred from electronic annotation /// 0071875 // adrenergic receptor signaling pathway // inferred from sequence or structural similarity /// 0086004 // regulation of cardiac muscle cell contraction // inferred from sequence or structural similarity /// 0086024 // adrenergic receptor signaling pathway involved in positive regulation of heart rate // inferred by curator /// 1901844 // regulation of cell communication by electrical coupling involved in cardiac conduction // inferred by curator /// 1901898 // negative regulation of relaxation of cardiac muscle // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005891 // voltage-gated calcium channel complex // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // non-traceable author statement /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from direct assay /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from genetic interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0030552 // cAMP binding // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031698 // beta-2 adrenergic receptor binding // inferred from sequence or structural similarity /// 0044325 // ion channel binding // inferred from physical interaction /// 0044325 // ion channel binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction /// 0097110 // scaffold protein binding // inferred from physical interaction </td> <td> -40.68 </td> <td> 90.19 </td> <td> -4.46 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 200822_x_at </td> <td> 200822_x_at </td> <td> NM_000365 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000365.1 /DEF=Homo sapiens triosephosphate isomerase 1 (TPI1), mRNA. /FEA=mRNA /GEN=TPI1 /PROD=triosephosphate isomerase 1 /DB_XREF=gi:4507644 /UG=Hs.83848 triosephosphate isomerase 1 /FL=gb:BC004230.1 gb:NM_000365.1 </td> <td> NM_000365 </td> <td> triosephosphate isomerase 1 </td> <td> TPI1 </td> <td> 7167 </td> <td> NM_000365 /// NM_001159287 /// NM_001258026 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0019682 // glyceraldehyde-3-phosphate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004807 // triose-phosphate isomerase activity // not recorded /// 0004807 // triose-phosphate isomerase activity // non-traceable author statement /// 0004807 // triose-phosphate isomerase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation </td> <td> -388.70 </td> <td> 1292.08 </td> <td> -4.46 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203614_at </td> <td> 203614_at </td> <td> NM_021645 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021645.1 /DEF=Homo sapiens KIAA0266 gene product (KIAA0266), mRNA. /FEA=mRNA /GEN=KIAA0266 /PROD=KIAA0266 gene product /DB_XREF=gi:11063982 /UG=Hs.127376 KIAA0266 gene product /FL=gb:NM_021645.1 gb:D87455.1 </td> <td> NM_021645 </td> <td> ALG11, alpha-1,2-mannosyltransferase /// UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast) </td> <td> ALG11 /// UTP14C </td> <td> 9724 /// 440138 </td> <td> NM_001004127 /// NM_021645 /// NR_036571 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0097502 // mannosylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0032040 // small-subunit processome // inferred from electronic annotation </td> <td> 0004377 // GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> 46.32 </td> <td> 138.06 </td> <td> 4.45 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212896_at </td> <td> 212896_at </td> <td> D29641 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D29641.2 /DEF=Homo sapiens mRNA for KIAA0052 protein, partial cds. /FEA=mRNA /GEN=KIAA0052 /PROD=KIAA0052 protein /DB_XREF=gi:6633994 /UG=Hs.278608 KIAA0052 protein </td> <td> D29641 </td> <td> superkiller viralicidic activity 2-like 2 (S. cerevisiae) </td> <td> SKIV2L2 </td> <td> 23517 </td> <td> NM_015360 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000460 // maturation of 5.8S rRNA // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0000178 // exosome (RNase complex) // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 48.52 </td> <td> 144.76 </td> <td> 4.45 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 222143_s_at </td> <td> 222143_s_at </td> <td> AY007098 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AY007098.1 /DEF=Homo sapiens clone TCCCIA00183 mRNA sequence. /FEA=mRNA /DB_XREF=gi:9955989 /UG=Hs.27556 hypothetical protein FLJ22405 </td> <td> AY007098 </td> <td> myotubularin related protein 14 </td> <td> MTMR14 </td> <td> 64419 </td> <td> NM_001077525 /// NM_001077526 /// NM_022485 /// XM_005265400 /// XR_245152 </td> <td> 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0001726 // ruffle // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0004438 // phosphatidylinositol-3-phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> -53.30 </td> <td> 153.00 </td> <td> -4.45 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 203579_s_at </td> <td> 203579_s_at </td> <td> AI660619 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI660619 /FEA=EST /DB_XREF=gi:4764202 /DB_XREF=est:wf21h04.x1 /CLONE=IMAGE:2351287 /UG=Hs.10315 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 /FL=gb:D87432.1 gb:NM_003983.1 </td> <td> AI660619 </td> <td> solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 </td> <td> SLC7A6 </td> <td> 9057 </td> <td> NM_001076785 /// NM_003983 /// XR_243433 /// XR_429735 /// XR_429736 /// XR_429737 /// XR_429738 /// XR_429739 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation </td> <td> 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation </td> <td> 42.35 </td> <td> 76.20 </td> <td> 4.45 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 221487_s_at </td> <td> 221487_s_at </td> <td> AF157510 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF157510.1 /DEF=Homo sapiens beta endosulfine mRNA, complete cds. /FEA=mRNA /PROD=beta endosulfine /DB_XREF=gi:8886010 /UG=Hs.111680 endosulfine alpha /FL=gb:AF067170.1 gb:AF157510.1 </td> <td> AF157510 </td> <td> endosulfine alpha </td> <td> ENSA </td> <td> 2029 </td> <td> NM_004436 /// NM_207042 /// NM_207043 /// NM_207044 /// NM_207045 /// NM_207046 /// NM_207047 /// NM_207168 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from sequence or structural similarity /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from sequence or structural similarity /// 0007584 // response to nutrient // traceable author statement /// 0009749 // response to glucose // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0050790 // regulation of catalytic activity // inferred from sequence or structural similarity /// 0050796 // regulation of insulin secretion // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from direct assay /// 0008200 // ion channel inhibitor activity // traceable author statement /// 0008601 // protein phosphatase type 2A regulator activity // inferred from sequence or structural similarity /// 0019212 // phosphatase inhibitor activity // inferred from sequence or structural similarity /// 0019870 // potassium channel inhibitor activity // inferred from direct assay /// 0051721 // protein phosphatase 2A binding // inferred from sequence or structural similarity </td> <td> 40.62 </td> <td> 32.66 </td> <td> 4.45 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 212023_s_at </td> <td> 212023_s_at </td> <td> AU147044 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU147044 /FEA=EST /DB_XREF=gi:11008565 /DB_XREF=est:AU147044 /CLONE=HEMBB1002259 /UG=Hs.80976 antigen identified by monoclonal antibody Ki-67 </td> <td> AU147044 </td> <td> marker of proliferation Ki-67 </td> <td> MKI67 </td> <td> 4288 </td> <td> NM_001145966 /// NM_002417 /// XM_006717864 </td> <td> 0006259 // DNA metabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030212 // hyaluronan metabolic process // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0034605 // cellular response to heat // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000793 // condensed chromosome // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 51.08 </td> <td> 67.29 </td> <td> 4.45 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 202150_s_at </td> <td> 202150_s_at </td> <td> U64317 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U64317.1 /DEF=Human Crk-associated substrate related protein Cas-L mRNA, complete cds.  /FEA=mRNA /PROD=Crk-associated substrate related protein Cas-L /DB_XREF=gi:1490786 /UG=Hs.80261 enhancer of filamentation 1 (cas-like docking; Crk-associated substrate related) /FL=gb:L43821.1 gb:U64317.1 gb:NM_006403.1 </td> <td> U64317 </td> <td> neural precursor cell expressed, developmentally down-regulated 9 </td> <td> NEDD9 </td> <td> 4739 </td> <td> NM_001142393 /// NM_001271033 /// NM_006403 /// NM_182966 /// NR_073131 </td> <td> 0007010 // cytoskeleton organization // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005819 // spindle // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -43.77 </td> <td> 148.09 </td> <td> -4.45 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 207098_s_at </td> <td> 207098_s_at </td> <td> NM_017927 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017927.1 /DEF=Homo sapiens hypothetical protein FLJ20693 (FLJ20693), mRNA. /FEA=mRNA /GEN=FLJ20693 /PROD=hypothetical protein FLJ20693 /DB_XREF=gi:8923620 /UG=Hs.197877 hypothetical protein FLJ20693 /FL=gb:NM_017927.1 </td> <td> NM_017927 </td> <td> mitofusin 1 </td> <td> MFN1 </td> <td> 55669 </td> <td> NM_017927 /// NM_033540 /// XM_005247595 /// XM_005247596 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0008053 // mitochondrial fusion // inferred from direct assay /// 0008053 // mitochondrial fusion // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 44.03 </td> <td> 63.81 </td> <td> 4.44 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.46 </td> </tr>
  <tr> <td> 205193_at </td> <td> 205193_at </td> <td> NM_012323 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012323.1 /DEF=Homo sapiens v-maf musculoaponeurotic fibrosarcoma (avian) oncogene family, protein F (MAFF), mRNA.  /FEA=mRNA /GEN=MAFF /PROD=v-maf musculoaponeurotic fibrosarcoma (avian)oncogene family, protein F /DB_XREF=gi:6912489 /UG=Hs.51305 v-maf musculoaponeurotic fibrosarcoma (avian) oncogene family, protein F /FL=gb:AB025247.1 gb:NM_012323.1 </td> <td> NM_012323 </td> <td> v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F </td> <td> MAFF </td> <td> 23764 </td> <td> NM_001161572 /// NM_001161573 /// NM_001161574 /// NM_012323 /// NM_152878 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007567 // parturition // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation /// 0045604 // regulation of epidermal cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 82.35 </td> <td> 188.15 </td> <td> 4.44 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202268_s_at </td> <td> 202268_s_at </td> <td> NM_003905 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003905.1 /DEF=Homo sapiens amyloid beta precursor protein-binding protein 1, 59kD (APPBP1), mRNA.  /FEA=mRNA /GEN=APPBP1 /PROD=Amyloid beta precursor protein-binding protein1 /DB_XREF=gi:4502168 /UG=Hs.61828 amyloid beta precursor protein-binding protein 1, 59kD /FL=gb:AL136798.1 gb:BC000480.1 gb:U50939.1 gb:NM_003905.1 </td> <td> NM_003905 </td> <td> NEDD8 activating enzyme E1 subunit 1 </td> <td> NAE1 </td> <td> 8883 </td> <td> NM_001018159 /// NM_001018160 /// NM_001286500 /// NM_003905 /// XM_005256215 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0033314 // mitotic DNA replication checkpoint // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043523 // regulation of neuron apoptotic process // inferred from direct assay /// 0045116 // protein neddylation // inferred from direct assay /// 0045116 // protein neddylation // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from direct assay </td> <td> 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // not recorded /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019781 // NEDD8 activating enzyme activity // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> 128.45 </td> <td> 393.05 </td> <td> 4.44 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 214039_s_at </td> <td> 214039_s_at </td> <td> T15777 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:T15777 /FEA=EST /DB_XREF=gi:517939 /DB_XREF=est:IB1875 /UG=Hs.296398 Homo sapiens mRNA; cDNA DKFZp586E1124 (from clone DKFZp586E1124); complete cds </td> <td> T15777 </td> <td> lysosomal protein transmembrane 4 beta </td> <td> LAPTM4B </td> <td> 55353 </td> <td> NM_018407 </td> <td> 0006810 // transport // inferred from electronic annotation </td> <td> 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 139.12 </td> <td> 808.21 </td> <td> 4.44 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 214143_x_at </td> <td> 214143_x_at </td> <td> AI560573 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI560573 /FEA=EST /DB_XREF=gi:4510914 /DB_XREF=est:tq49c03.x1 /CLONE=IMAGE:2212132 /UG=Hs.184582 ribosomal protein L24 </td> <td> AI560573 </td> <td> ribosomal protein L24 </td> <td> RPL24 </td> <td> 6152 </td> <td> NM_000986 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0015808 // L-alanine transport // inferred from electronic annotation /// 0015816 // glycine transport // inferred from electronic annotation /// 0015824 // proline transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0035524 // proline transmembrane transport // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005280 // hydrogen:amino acid symporter activity // inferred from electronic annotation /// 0015180 // L-alanine transmembrane transporter activity // inferred from electronic annotation /// 0015187 // glycine transmembrane transporter activity // inferred from electronic annotation /// 0015187 // glycine transmembrane transporter activity // inferred from mutant phenotype /// 0015193 // L-proline transmembrane transporter activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -244.33 </td> <td> 2581.31 </td> <td> -4.43 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 210541_s_at </td> <td> 210541_s_at </td> <td> AF230394 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF230394.1 /DEF=Homo sapiens tripartite motif protein TRIM27 beta mRNA, complete cds.  /FEA=mRNA /PROD=tripartite motif protein TRIM27 beta /DB_XREF=gi:12275875 /UG=Hs.142653 ret finger protein /FL=gb:AF230394.1 </td> <td> AF230394 </td> <td> tripartite motif containing 27 </td> <td> TRIM27 </td> <td> 5987 </td> <td> NM_006510 /// NM_030950 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002820 // negative regulation of adaptive immune response // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0032720 // negative regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0032897 // negative regulation of viral transcription // inferred from direct assay /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from direct assay /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0045087 // innate immune response // inferred from direct assay /// 0045814 // negative regulation of gene expression, epigenetic // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0070206 // protein trimerization // inferred from direct assay /// 0070534 // protein K63-linked ubiquitination // inferred from mutant phenotype /// 0072643 // interferon-gamma secretion // inferred from mutant phenotype /// 0090281 // negative regulation of calcium ion import // inferred from mutant phenotype /// 1900041 // negative regulation of interleukin-2 secretion // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016605 // PML body // inferred from electronic annotation /// 0030904 // retromer complex // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // traceable author statement </td> <td> 88.50 </td> <td> 120.17 </td> <td> 4.43 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 200594_x_at </td> <td> 200594_x_at </td> <td> NM_004501 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004501.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) (HNRPU), mRNA.  /FEA=mRNA /GEN=HNRPU /PROD=heterogeneous nuclear ribonucleoprotein U(scaffold attachment factor A) /DB_XREF=gi:4758545 /UG=Hs.103804 heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) /FL=gb:BC003367.1 gb:BC003621.1 gb:NM_004501.1 </td> <td> NM_004501 </td> <td> heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) </td> <td> HNRNPU </td> <td> 3192 </td> <td> NM_004501 /// NM_031844 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 274.35 </td> <td> 887.33 </td> <td> 4.43 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218306_s_at </td> <td> 218306_s_at </td> <td> NM_003922 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003922.1 /DEF=Homo sapiens hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA.  /FEA=mRNA /GEN=HERC1 /PROD=guanine nucleotide exchange factor p532 /DB_XREF=gi:4557025 /UG=Hs.76127 hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 /FL=gb:U50078.1 gb:NM_003922.1 </td> <td> NM_003922 </td> <td> HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 </td> <td> HERC1 </td> <td> 8925 </td> <td> NM_003922 /// XM_005254742 /// XM_005254743 /// XM_005254746 /// XM_005254747 /// XM_006720728 /// XR_243129 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0010507 // negative regulation of autophagy // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0021702 // cerebellar Purkinje cell differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -51.58 </td> <td> 121.19 </td> <td> -4.43 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 210582_s_at </td> <td> 210582_s_at </td> <td> AL117466 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL117466.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586K0922 (from clone DKFZp586K0922); complete cds.  /FEA=mRNA /GEN=DKFZp586K0922 /PROD=hypothetical protein /DB_XREF=gi:5911930 /UG=Hs.278027 LIM domain kinase 2 /FL=gb:AL117466.1 gb:NM_016733.1 </td> <td> AL117466 </td> <td> LIM domain kinase 2 </td> <td> LIMK2 </td> <td> 3985 </td> <td> NM_001031801 /// NM_005569 /// NM_016733 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016310 // phosphorylation // traceable author statement /// 0042325 // regulation of phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005801 // cis-Golgi network // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -50.52 </td> <td> 217.99 </td> <td> -4.43 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 213506_at </td> <td> 213506_at </td> <td> BE965369 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE965369 /FEA=EST /DB_XREF=gi:11769659 /DB_XREF=est:601659282R1 /CLONE=IMAGE:3895653 /UG=Hs.168102 Human proteinase activated receptor-2 mRNA, 3UTR </td> <td> BE965369 </td> <td> coagulation factor II (thrombin) receptor-like 1 </td> <td> F2RL1 </td> <td> 2150 </td> <td> NM_005242 </td> <td> 0002286 // T cell activation involved in immune response // inferred from sequence or structural similarity /// 0002376 // immune system process // inferred from electronic annotation /// 0002690 // positive regulation of leukocyte chemotaxis // inferred from direct assay /// 0002741 // positive regulation of cytokine secretion involved in immune response // inferred from direct assay /// 0003104 // positive regulation of glomerular filtration // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from direct assay /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from sequence or structural similarity /// 0007596 // blood coagulation // inferred from electronic annotation /// 0010804 // negative regulation of tumor necrosis factor-mediated signaling pathway // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from sequence or structural similarity /// 0030193 // regulation of blood coagulation // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030836 // positive regulation of actin filament depolymerization // inferred from direct assay /// 0031274 // positive regulation of pseudopodium assembly // inferred from sequence or structural similarity /// 0032930 // positive regulation of superoxide anion generation // inferred from direct assay /// 0034137 // positive regulation of toll-like receptor 2 signaling pathway // inferred from mutant phenotype /// 0034140 // negative regulation of toll-like receptor 3 signaling pathway // inferred from mutant phenotype /// 0034141 // positive regulation of toll-like receptor 3 signaling pathway // inferred from mutant phenotype /// 0034145 // positive regulation of toll-like receptor 4 signaling pathway // inferred from direct assay /// 0035025 // positive regulation of Rho protein signal transduction // inferred from mutant phenotype /// 0035025 // positive regulation of Rho protein signal transduction // inferred from sequence or structural similarity /// 0035926 // chemokine (C-C motif) ligand 2 secretion // inferred from direct assay /// 0042119 // neutrophil activation // inferred from direct assay /// 0043122 // regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043311 // positive regulation of eosinophil degranulation // inferred from direct assay /// 0045087 // innate immune response // inferred from electronic annotation /// 0045909 // positive regulation of vasodilation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046329 // negative regulation of JNK cascade // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0050702 // interleukin-1 beta secretion // inferred from direct assay /// 0050900 // leukocyte migration // inferred from direct assay /// 0050921 // positive regulation of chemotaxis // inferred from sequence or structural similarity /// 0050927 // positive regulation of positive chemotaxis // inferred from direct assay /// 0051607 // defense response to virus // inferred from direct assay /// 0060100 // positive regulation of phagocytosis, engulfment // inferred from direct assay /// 0061028 // establishment of endothelial barrier // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070493 // thrombin receptor signaling pathway // inferred from electronic annotation /// 0070661 // leukocyte proliferation // inferred from sequence or structural similarity /// 0070963 // positive regulation of neutrophil mediated killing of gram-negative bacterium // inferred from direct assay /// 0072608 // interleukin-10 secretion // inferred from direct assay /// 0072643 // interferon-gamma secretion // inferred from sequence or structural similarity /// 0090195 // chemokine secretion // inferred from direct assay /// 0090198 // negative regulation of chemokine secretion // inferred from direct assay /// 0097029 // mature dendritic cell differentiation // inferred from direct assay /// 0097029 // mature dendritic cell differentiation // inferred from sequence or structural similarity /// 1900135 // positive regulation of renin secretion into blood stream // inferred from sequence or structural similarity /// 2000484 // positive regulation of interleukin-8 secretion // inferred from direct assay /// 2000778 // positive regulation of interleukin-6 secretion // inferred from direct assay </td> <td> 0005794 // Golgi apparatus // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031143 // pseudopodium // inferred from sequence or structural similarity </td> <td> 0001965 // G-protein alpha-subunit binding // inferred from sequence or structural similarity /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from mutant phenotype /// 0004930 // G-protein coupled receptor activity // inferred from sequence or structural similarity /// 0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015057 // thrombin receptor activity // inferred from electronic annotation /// 0031681 // G-protein beta-subunit binding // inferred from sequence or structural similarity </td> <td> -354.45 </td> <td> 748.35 </td> <td> -4.42 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 221522_at </td> <td> 221522_at </td> <td> AL136784 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136784.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434L0718 (from clone DKFZp434L0718); complete cds.  /FEA=mRNA /GEN=DKFZp434L0718 /PROD=hypothetical protein /DB_XREF=gi:12053080 /UG=Hs.59236 Homo sapiens mRNA; cDNA DKFZp434L0718 (from clone DKFZp434L0718); complete cds /FL=gb:AL136784.1 </td> <td> AL136784 </td> <td> ankyrin repeat domain 27 (VPS9 domain) </td> <td> ANKRD27 </td> <td> 84079 </td> <td> NM_032139 /// XM_005259310 /// XM_006723412 /// XM_006723413 </td> <td> 0043087 // regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 57.63 </td> <td> 109.36 </td> <td> 4.42 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218500_at </td> <td> 218500_at </td> <td> NM_016647 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016647.1 /DEF=Homo sapiens mesenchymal stem cell protein DSCD75 (LOC51337), mRNA. /FEA=mRNA /GEN=LOC51337 /PROD=mesenchymal stem cell protein DSCD75 /DB_XREF=gi:7706199 /UG=Hs.25237 mesenchymal stem cell protein DSCD75 /FL=gb:BC001311.1 gb:AF242773.1 gb:NM_016647.1 </td> <td> NM_016647 </td> <td> thioesterase superfamily member 6 </td> <td> THEM6 </td> <td> 51337 </td> <td> NM_016647 /// XM_005250955 </td> <td>  </td> <td> 0005576 // extracellular region // inferred from electronic annotation </td> <td>  </td> <td> 43.40 </td> <td> 39.38 </td> <td> 4.42 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202160_at </td> <td> 202160_at </td> <td> NM_004380 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004380.1 /DEF=Homo sapiens CREB binding protein (Rubinstein-Taybi syndrome) (CREBBP), mRNA.  /FEA=mRNA /GEN=CREBBP /PROD=CREB binding protein /DB_XREF=gi:4758055 /UG=Hs.23598 CREB binding protein (Rubinstein-Taybi syndrome) /FL=gb:U47741.1 gb:NM_004380.1 </td> <td> NM_004380 </td> <td> CREB binding protein </td> <td> CREBBP </td> <td> 1387 </td> <td> NM_001079846 /// NM_004380 /// XM_005255124 /// XM_005255125 /// XM_006720848 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001666 // response to hypoxia // traceable author statement /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // traceable author statement /// 0009749 // response to glucose // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010560 // positive regulation of glycoprotein biosynthetic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from direct assay /// 0018076 // N-terminal peptidyl-lysine acetylation // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030718 // germ-line stem cell maintenance // inferred from electronic annotation /// 0031324 // negative regulation of cellular metabolic process // inferred from electronic annotation /// 0031325 // positive regulation of cellular metabolic process // inferred from electronic annotation /// 0032025 // response to cobalt ion // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0034612 // response to tumor necrosis factor // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042592 // homeostatic process // non-traceable author statement /// 0042733 // embryonic digit morphogenesis // traceable author statement /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0043491 // protein kinase B signaling // inferred from electronic annotation /// 0043627 // response to estrogen // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0045793 // positive regulation of cell size // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0050714 // positive regulation of protein secretion // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0060177 // regulation of angiotensin metabolic process // inferred from electronic annotation /// 0060298 // positive regulation of sarcomere organization // inferred from electronic annotation /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0065004 // protein-DNA complex assembly // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0070542 // response to fatty acid // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // traceable author statement </td> <td> 0000123 // histone acetyltransferase complex // inferred from electronic annotation /// 0000785 // chromatin // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016604 // nuclear body // inferred from direct assay /// 0032993 // protein-DNA complex // inferred from electronic annotation </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001102 // RNA polymerase II activating transcription factor binding // traceable author statement /// 0001105 // RNA polymerase II transcription coactivator activity // traceable author statement /// 0001159 // core promoter proximal region DNA binding // inferred from electronic annotation /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from physical interaction /// 0003823 // antigen binding // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004468 // lysine N-acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from electronic annotation /// 0035259 // glucocorticoid receptor binding // inferred from electronic annotation /// 0042975 // peroxisome proliferator activated receptor binding // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from electronic annotation /// 0043426 // MRF binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051019 // mitogen-activated protein kinase binding // inferred from electronic annotation /// 0051059 // NF-kappaB binding // inferred from electronic annotation </td> <td> -54.98 </td> <td> 157.44 </td> <td> -4.42 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 35671_at </td> <td> 35671_at </td> <td> U02619 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. U02619:Human TFIIIC Box B-binding subunit mRNA, complete cds /cds=(60,6389) /gb=U02619 /gi=414932 /ug=Hs.331 /len=6996 </td> <td> U02619 </td> <td> general transcription factor IIIC, polypeptide 1, alpha 220kDa </td> <td> GTF3C1 </td> <td> 2975 </td> <td> NM_001286242 /// NM_001520 /// XM_006721042 </td> <td> 0006351 // transcription, DNA-templated // inferred by curator /// 0006383 // transcription from RNA polymerase III promoter // inferred by curator /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0009303 // rRNA transcription // traceable author statement /// 0009304 // tRNA transcription // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042791 // 5S class rRNA transcription from RNA polymerase III type 1 promoter // inferred by curator /// 0042797 // tRNA transcription from RNA polymerase III promoter // inferred by curator </td> <td> 0000127 // transcription factor TFIIIC complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred by curator /// 0005515 // protein binding // inferred from physical interaction </td> <td> 72.47 </td> <td> 164.86 </td> <td> 4.41 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218049_s_at </td> <td> 218049_s_at </td> <td> NM_014078 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014078.1 /DEF=Homo sapiens L13 protein (L13), mRNA. /FEA=mRNA /GEN=L13 /PROD=L13 protein /DB_XREF=gi:7662495 /UG=Hs.43946 L13 protein /FL=gb:AF112214.1 gb:NM_014078.1 </td> <td> NM_014078 </td> <td> mitochondrial ribosomal protein L13 </td> <td> MRPL13 </td> <td> 28998 </td> <td> NM_014078 /// XM_006716547 </td> <td> 0006412 // translation // non-traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from direct assay /// 0005762 // mitochondrial large ribosomal subunit // inferred from direct assay /// 0005762 // mitochondrial large ribosomal subunit // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 49.53 </td> <td> 108.91 </td> <td> 4.41 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 221788_at </td> <td> 221788_at </td> <td> AV727934 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV727934 /FEA=EST /DB_XREF=gi:10837355 /DB_XREF=est:AV727934 /CLONE=HTCBWH07 /UG=Hs.237323 N-acetylglucosamine-phosphate mutase </td> <td> AV727934 </td> <td> phosphoglucomutase 3 </td> <td> PGM3 </td> <td> 5238 </td> <td> NM_001199917 /// NM_001199918 /// NM_001199919 /// NM_015599 /// XM_005248728 /// XM_006715504 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006041 // glucosamine metabolic process // non-traceable author statement /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // not recorded /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019255 // glucose 1-phosphate metabolic process // inferred from electronic annotation /// 0030097 // hemopoiesis // not recorded /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004610 // phosphoacetylglucosamine mutase activity // inferred from direct assay /// 0004614 // phosphoglucomutase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016868 // intramolecular transferase activity, phosphotransferases // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 41.15 </td> <td> 43.20 </td> <td> 4.41 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201544_x_at </td> <td> 201544_x_at </td> <td> BF675004 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF675004 /FEA=EST /DB_XREF=gi:11948899 /DB_XREF=est:602138088F1 /CLONE=IMAGE:4274564 /UG=Hs.117176 poly(A)-binding protein, nuclear 1 /FL=gb:NM_004643.1 </td> <td> BF675004 </td> <td> BCL2-like 2 /// BCL2L2-PABPN1 readthrough /// poly(A) binding protein, nuclear 1 </td> <td> BCL2L2 /// BCL2L2-PABPN1 /// PABPN1 </td> <td> 599 /// 8106 /// 100529063 </td> <td> NM_001199839 /// NM_001199864 /// NM_004050 /// NM_004643 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // not recorded /// 0010467 // gene expression // traceable author statement /// 0016973 // poly(A)+ mRNA export from nucleus // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // traceable author statement /// 0019054 // modulation by virus of host process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0046778 // modification by virus of host mRNA processing // traceable author statement /// 0060011 // Sertoli cell proliferation // inferred from electronic annotation /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // not recorded /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // not recorded </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // not recorded /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // not recorded /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // not recorded /// 0051400 // BH domain binding // inferred from electronic annotation </td> <td> 196.70 </td> <td> 563.48 </td> <td> 4.41 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 211758_x_at </td> <td> 211758_x_at </td> <td> BC005968 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005968.1 /DEF=Homo sapiens, ATP binding protein associated with cell differentiation, clone MGC:14620, mRNA, complete cds.  /FEA=mRNA /PROD=ATP binding protein associated with celldifferentiation /DB_XREF=gi:13543638 /FL=gb:BC005968.1 </td> <td> BC005968 </td> <td> thioredoxin domain containing 9 </td> <td> TXNDC9 </td> <td> 10190 </td> <td> NM_005783 </td> <td> 0045454 // cell redox homeostasis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 130.80 </td> <td> 556.75 </td> <td> 4.41 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212607_at </td> <td> 212607_at </td> <td> N32526 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N32526 /FEA=EST /DB_XREF=gi:1152925 /DB_XREF=est:yy11f04.s1 /CLONE=IMAGE:270943 /UG=Hs.300642 serologically defined colon cancer antigen 8 </td> <td> N32526 </td> <td> v-akt murine thymoma viral oncogene homolog 3 </td> <td> AKT3 </td> <td> 10000 </td> <td> NM_001206729 /// NM_005465 /// NM_181690 /// XM_005272994 /// XM_005272995 /// XM_005272997 /// XM_006711725 /// XM_006711726 /// XM_006724959 /// XM_006724960 /// XM_006724961 /// XM_006724962 /// XM_006724963 </td> <td> 0000002 // mitochondrial genome maintenance // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -98.18 </td> <td> 335.19 </td> <td> -4.41 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201384_s_at </td> <td> 201384_s_at </td> <td> NM_005899 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005899.1 /DEF=Homo sapiens membrane component, chromosome 17, surface marker 2 (ovarian carcinoma antigen CA125) (M17S2), mRNA.  /FEA=mRNA /GEN=M17S2 /PROD=membrane component, chromosome 17, surfacemarker 2 (ovarian carcinoma antigen CA125) /DB_XREF=gi:5174504 /UG=Hs.277721 membrane component, chromosome 17, surface marker 2 (ovarian carcinoma antigen CA125) /FL=gb:D30756.1 gb:NM_005899.1 </td> <td> NM_005899 </td> <td> neighbor of BRCA1 gene 1 </td> <td> NBR1 </td> <td> 4077 </td> <td> NM_001291571 /// NM_001291572 /// NM_005899 /// NM_031858 /// NM_031862 /// XM_006721903 </td> <td> 0016236 // macroautophagy // inferred from direct assay /// 0030500 // regulation of bone mineralization // inferred from sequence or structural similarity /// 0032872 // regulation of stress-activated MAPK cascade // inferred from sequence or structural similarity /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0051259 // protein oligomerization // inferred from direct assay </td> <td> 0000407 // pre-autophagosomal structure // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005776 // autophagic vacuole // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031430 // M band // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051019 // mitogen-activated protein kinase binding // inferred from sequence or structural similarity </td> <td> -74.65 </td> <td> 211.07 </td> <td> -4.41 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 32836_at </td> <td> 32836_at </td> <td> U56417 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. U56417:Human lysophosphatidic acid acyltransferase-alpha mRNA, complete cds /cds=(318,1169) /gb=U56417 /gi=2155237 /ug=Hs.209119 /len=2232 </td> <td> U56417 </td> <td> 1-acylglycerol-3-phosphate O-acyltransferase 1 </td> <td> AGPAT1 </td> <td> 10554 </td> <td> NM_006411 /// NM_032741 /// XM_005248805 /// XM_005248806 /// XM_005272761 /// XM_005272762 /// XM_005274829 /// XM_005274830 /// XM_005275073 /// XM_005275074 /// XM_005275203 /// XM_005275204 /// XM_005275337 /// XM_005275338 /// XM_005275504 /// XM_005275505 </td> <td> 0001819 // positive regulation of cytokine production // inferred from mutant phenotype /// 0001961 // positive regulation of cytokine-mediated signaling pathway // inferred by curator /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006654 // phosphatidic acid biosynthetic process // inferred from genetic interaction /// 0006654 // phosphatidic acid biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0031325 // positive regulation of cellular metabolic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // inferred from genetic interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation </td> <td> 90.38 </td> <td> 313.59 </td> <td> 4.41 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 40149_at </td> <td> 40149_at </td> <td> AL049924 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AL049924:Homo sapiens mRNA; cDNA DKFZp547G1110 (from clone DKFZp547G1110) /cds=(0,1623) /gb=AL049924 /gi=4884170 /ug=Hs.15744 /len=2381 </td> <td> AL049924 </td> <td> SH2B adaptor protein 1 </td> <td> SH2B1 </td> <td> 25970 </td> <td> NM_001145795 /// NM_001145796 /// NM_001145797 /// NM_001145812 /// NM_015503 /// XM_005255240 /// XM_006721031 /// XM_006721032 /// XM_006721033 /// XM_006721034 /// XM_006721035 /// XM_006721036 /// XM_006721037 </td> <td> 0006928 // cellular component movement // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from electronic annotation /// 2000278 // regulation of DNA biosynthetic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> 38.20 </td> <td> 56.80 </td> <td> 4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202060_at </td> <td> 202060_at </td> <td> NM_014633 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014633.1 /DEF=Homo sapiens KIAA0155 gene product (KIAA0155), mRNA. /FEA=mRNA /GEN=KIAA0155 /PROD=KIAA0155 gene product /DB_XREF=gi:7661949 /UG=Hs.173288 KIAA0155 gene product /FL=gb:NM_014633.1 gb:D63875.1 </td> <td> NM_014633 </td> <td> CTR9, Paf1/RNA polymerase II complex component </td> <td> CTR9 </td> <td> 9646 </td> <td> NM_014633 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001711 // endodermal cell fate commitment // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from sequence or structural similarity /// 0010390 // histone monoubiquitination // inferred from direct assay /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from direct assay /// 0032968 // positive regulation of transcription elongation from RNA polymerase II promoter // inferred from direct assay /// 0033523 // histone H2B ubiquitination // inferred from direct assay /// 0045638 // negative regulation of myeloid cell differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from mutant phenotype /// 0070102 // interleukin-6-mediated signaling pathway // inferred from sequence or structural similarity /// 0071222 // cellular response to lipopolysaccharide // inferred from sequence or structural similarity /// 0080182 // histone H3-K4 trimethylation // inferred from mutant phenotype /// 2001162 // positive regulation of histone H3-K79 methylation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016593 // Cdc73/Paf1 complex // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035327 // transcriptionally active chromatin // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042169 // SH2 domain binding // inferred from electronic annotation </td> <td> 71.68 </td> <td> 178.86 </td> <td> 4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 219184_x_at </td> <td> 219184_x_at </td> <td> NM_013337 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013337.1 /DEF=Homo sapiens translocase of inner mitochondrial membrane 22 (yeast) homolog (TIM22), mRNA.  /FEA=mRNA /GEN=TIM22 /PROD=translocase of inner mitochondrial membrane 22(yeast) homolog /DB_XREF=gi:7019552 /UG=Hs.87595 translocase of inner mitochondrial membrane 22 (yeast) homolog /FL=gb:BC002324.1 gb:AF155330.1 gb:NM_013337.1 </td> <td> NM_013337 </td> <td> translocase of inner mitochondrial membrane 22 homolog (yeast) </td> <td> TIMM22 </td> <td> 29928 </td> <td> NM_013337 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045039 // protein import into mitochondrial inner membrane // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0015266 // protein channel activity // traceable author statement </td> <td> 60.03 </td> <td> 119.06 </td> <td> 4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217527_s_at </td> <td> 217527_s_at </td> <td> AI478300 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI478300 /FEA=EST /DB_XREF=gi:4371526 /DB_XREF=est:tm39e01.x1 /CLONE=IMAGE:2160504 /UG=Hs.192789 ESTs, Weakly similar to ALU6_HUMAN ALU SUBFAMILY SP SEQUENCE CONTAMINATION WARNING ENTRY H.sapiens </td> <td> AI478300 </td> <td> nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein </td> <td> NFATC2IP </td> <td> 84901 </td> <td> NM_032815 </td> <td> 0001816 // cytokine production // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 75.70 </td> <td> 101.62 </td> <td> 4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 221806_s_at </td> <td> 221806_s_at </td> <td> BF590997 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF590997 /FEA=EST /DB_XREF=gi:11683321 /DB_XREF=est:7h47c07.x1 /CLONE=IMAGE:3319116 /UG=Hs.7187 hypothetical protein FLJ10707 </td> <td> BF590997 </td> <td> SET domain containing 5 </td> <td> SETD5 </td> <td> 55209 </td> <td> NM_001080517 /// NM_001292043 /// NM_018187 /// XM_005265299 /// XM_005265301 /// XM_005265303 /// XM_005265307 /// XM_006713235 /// XM_006713236 /// XM_006713237 /// XM_006713238 /// XM_006713239 /// XM_006713240 /// XM_006713241 /// XM_006713242 /// XM_006713243 /// XM_006713244 /// XM_006713245 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -145.05 </td> <td> 391.88 </td> <td> -4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 206025_s_at </td> <td> 206025_s_at </td> <td> AW188198 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW188198 /FEA=EST /DB_XREF=gi:6462634 /DB_XREF=est:xj93f03.x1 /CLONE=IMAGE:2664797 /UG=Hs.29352 tumor necrosis factor, alpha-induced protein 6 /FL=gb:NM_007115.1 </td> <td> AW188198 </td> <td> tumor necrosis factor, alpha-induced protein 6 </td> <td> TNFAIP6 </td> <td> 7130 </td> <td> NM_007115 </td> <td> 0006954 // inflammatory response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement </td> <td>  </td> <td> 0005540 // hyaluronic acid binding // inferred from electronic annotation </td> <td> -40.52 </td> <td> 41.31 </td> <td> -4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203725_at </td> <td> 203725_at </td> <td> NM_001924 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001924.2 /DEF=Homo sapiens growth arrest and DNA-damage-inducible, alpha (GADD45A), mRNA.  /FEA=mRNA /GEN=GADD45A /PROD=growth arrest and DNA-damage-inducible, alpha /DB_XREF=gi:9790904 /UG=Hs.80409 growth arrest and DNA-damage-inducible, alpha /FL=gb:M60974.1 gb:NM_001924.2 </td> <td> NM_001924 </td> <td> growth arrest and DNA-damage-inducible, alpha </td> <td> GADD45A </td> <td> 1647 </td> <td> NM_001199741 /// NM_001199742 /// NM_001924 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0000185 // activation of MAPKKK activity // inferred from direct assay /// 0006281 // DNA repair // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007098 // centrosome cycle // inferred from electronic annotation /// 0042770 // signal transduction in response to DNA damage // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 1900745 // positive regulation of p38MAPK cascade // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0001047 // core promoter binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -160.83 </td> <td> 304.34 </td> <td> -4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212644_s_at </td> <td> 212644_s_at </td> <td> AI671747 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI671747 /FEA=EST /DB_XREF=gi:4851478 /DB_XREF=est:wa05e06.x1 /CLONE=IMAGE:2297218 /UG=Hs.81360 Homo sapiens cDNA: FLJ21927 fis, clone HEP04178, highly similar to HSU90909 Human clone 23722 mRNA sequence </td> <td> AI671747 </td> <td> mitogen-activated protein kinase 1 interacting protein 1-like </td> <td> MAPK1IP1L </td> <td> 93487 </td> <td> NM_144578 </td> <td>  </td> <td>  </td> <td>  </td> <td> 90.85 </td> <td> 156.55 </td> <td> 4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212132_at </td> <td> 212132_at </td> <td> AL117499 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL117499.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434D1335 (from clone DKFZp434D1335); partial cds.  /FEA=mRNA /GEN=DKFZp434D1335 /PROD=hypothetical protein /DB_XREF=gi:5912003 /UG=Hs.8258 DKFZP434D1335 protein </td> <td> AL117499 </td> <td> LSM14A, SCD6 homolog A (S. cerevisiae) </td> <td> LSM14A </td> <td> 26065 </td> <td> NM_001114093 /// NM_015578 /// XM_005258719 /// XM_005258720 /// XM_005258721 /// XM_005276948 /// XM_005276949 /// XM_005276950 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from direct assay /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from mutant phenotype /// 0039529 // RIG-I signaling pathway // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0060340 // positive regulation of type I interferon-mediated signaling pathway // inferred from electronic annotation </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -50.80 </td> <td> 194.20 </td> <td> -4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202106_at </td> <td> 202106_at </td> <td> NM_005895 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005895.1 /DEF=Homo sapiens golgi autoantigen, golgin subfamily a, 3 (GOLGA3), mRNA.  /FEA=mRNA /GEN=GOLGA3 /PROD=golgi autoantigen, golgin subfamily a, 3 /DB_XREF=gi:5174440 /UG=Hs.4953 golgi autoantigen, golgin subfamily a, 3 /FL=gb:D63997.1 gb:NM_005895.1 </td> <td> NM_005895 </td> <td> golgin A3 </td> <td> GOLGA3 </td> <td> 2802 </td> <td> NM_001172557 /// NM_005895 /// XM_005266162 /// XM_005266164 /// XM_005266165 /// XM_005266167 /// XM_006719736 /// XM_006719737 /// XM_006719738 /// XM_006719739 /// XM_006719740 </td> <td> 0006891 // intra-Golgi vesicle-mediated transport // non-traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0090498 // extrinsic component of Golgi membrane // inferred from direct assay </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 63.40 </td> <td> 133.62 </td> <td> 4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 220526_s_at </td> <td> 220526_s_at </td> <td> NM_017971 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017971.1 /DEF=Homo sapiens hypothetical protein FLJ10024 (FLJ10024), mRNA. /FEA=mRNA /GEN=FLJ10024 /PROD=hypothetical protein FLJ10024 /DB_XREF=gi:8922189 /UG=Hs.182698 hypothetical protein FLJ10024 /FL=gb:NM_017971.1 </td> <td> NM_017971 </td> <td> mitochondrial ribosomal protein L20 </td> <td> MRPL20 </td> <td> 55052 </td> <td> NM_017971 /// XM_005244767 /// XM_005244768 </td> <td> 0006412 // translation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 85.43 </td> <td> 187.21 </td> <td> 4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212861_at </td> <td> 212861_at </td> <td> BF690150 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF690150 /FEA=EST /DB_XREF=gi:11975558 /DB_XREF=est:602186478T1 /CLONE=IMAGE:4298635 /UG=Hs.19210 ESTs </td> <td> BF690150 </td> <td> major facilitator superfamily domain containing 5 </td> <td> MFSD5 </td> <td> 84975 </td> <td> NM_001170790 /// NM_032889 /// XM_005269197 /// XM_005269198 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 39.88 </td> <td> 125.46 </td> <td> 4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203411_s_at </td> <td> 203411_s_at </td> <td> NM_005572 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005572.1 /DEF=Homo sapiens lamin AC (LMNA), mRNA. /FEA=mRNA /GEN=LMNA /PROD=lamin AC /DB_XREF=gi:5031874 /UG=Hs.77886 lamin AC /FL=gb:BC000511.1 gb:BC003162.1 gb:M13451.1 gb:NM_005572.1 </td> <td> NM_005572 </td> <td> lamin A/C </td> <td> LMNA </td> <td> 4000 </td> <td> NM_001257374 /// NM_001282624 /// NM_001282625 /// NM_001282626 /// NM_005572 /// NM_170707 /// NM_170708 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006997 // nucleus organization // inferred from electronic annotation /// 0006998 // nuclear envelope organization // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0007084 // mitotic nuclear envelope reassembly // traceable author statement /// 0007517 // muscle organ development // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from sequence or structural similarity /// 0030951 // establishment or maintenance of microtubule cytoskeleton polarity // inferred from sequence or structural similarity /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0034504 // protein localization to nucleus // inferred from sequence or structural similarity /// 0035105 // sterol regulatory element binding protein import into nucleus // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from electronic annotation /// 0090343 // positive regulation of cell aging // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005638 // lamin filament // inferred from electronic annotation /// 0005638 // lamin filament // traceable author statement /// 0005652 // nuclear lamina // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005882 // intermediate filament // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 250.20 </td> <td> 396.45 </td> <td> 4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201437_s_at </td> <td> 201437_s_at </td> <td> NM_001968 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001968.1 /DEF=Homo sapiens eukaryotic translation initiation factor 4E (EIF4E), mRNA.  /FEA=mRNA /GEN=EIF4E /PROD=eukaryotic translation initiation factor 4E /DB_XREF=gi:4503534 /UG=Hs.79306 eukaryotic translation initiation factor 4E /FL=gb:M15353.1 gb:NM_001968.1 </td> <td> NM_001968 </td> <td> eukaryotic translation initiation factor 4E </td> <td> EIF4E </td> <td> 1977 </td> <td> NM_001130678 /// NM_001130679 /// NM_001968 /// XM_006714126 /// XM_006714127 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0016281 // eukaryotic translation initiation factor 4F complex // inferred from direct assay /// 0016442 // RISC complex // inferred from direct assay /// 0033391 // chromatoid body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000339 // RNA cap binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0031370 // eukaryotic initiation factor 4G binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 55.75 </td> <td> 106.72 </td> <td> 4.40 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209240_at </td> <td> 209240_at </td> <td> AF070560 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF070560.1 /DEF=Homo sapiens clone 24689 mRNA sequence. /FEA=mRNA /DB_XREF=gi:3387927 /UG=Hs.100293 O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) /FL=gb:AF223393.1 </td> <td> AF070560 </td> <td> O-linked N-acetylglucosamine (GlcNAc) transferase </td> <td> OGT </td> <td> 8473 </td> <td> NM_003605 /// NM_181672 /// NM_181673 /// XM_005262308 /// XM_006724714 </td> <td> 0006110 // regulation of glycolytic process // inferred from direct assay /// 0006325 // chromatin organization // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006493 // protein O-linked glycosylation // inferred from direct assay /// 0006493 // protein O-linked glycosylation // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007584 // response to nutrient // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0032868 // response to insulin // inferred from direct assay /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0035020 // regulation of Rac protein signal transduction // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay /// 0045862 // positive regulation of proteolysis // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046626 // regulation of insulin receptor signaling pathway // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from direct assay /// 0061087 // positive regulation of histone H3-K27 methylation // inferred from mutant phenotype /// 0071300 // cellular response to retinoic acid // inferred from mutant phenotype /// 0080182 // histone H3-K4 trimethylation // inferred from mutant phenotype /// 0090526 // regulation of gluconeogenesis involved in cellular glucose homeostasis // inferred from sequence or structural similarity </td> <td> 0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0008047 // enzyme activator activity // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0008375 // acetylglucosaminyltransferase activity // traceable author statement /// 0016262 // protein N-acetylglucosaminyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0043995 // histone acetyltransferase activity (H4-K5 specific) // inferred from direct assay /// 0043996 // histone acetyltransferase activity (H4-K8 specific) // inferred from direct assay /// 0046972 // histone acetyltransferase activity (H4-K16 specific) // inferred from direct assay /// 0097363 // protein O-GlcNAc transferase activity // inferred from sequence or structural similarity </td> <td> 107.22 </td> <td> 165.11 </td> <td> 4.39 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 221475_s_at </td> <td> 221475_s_at </td> <td> NM_002948 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_002948.1 /DEF=Homo sapiens ribosomal protein L15 (RPL15), mRNA. /FEA=CDS /GEN=RPL15 /PROD=ribosomal protein L15 /DB_XREF=gi:4506602 /UG=Hs.74267 ribosomal protein L15 /FL=gb:AF279903.1 gb:L25899.1 gb:NM_002948.1 </td> <td> NM_002948 </td> <td> ribosomal protein L15 </td> <td> RPL15 </td> <td> 6138 </td> <td> NM_001253379 /// NM_001253380 /// NM_001253382 /// NM_001253383 /// NM_001253384 /// NM_002948 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // traceable author statement /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -610.97 </td> <td> 2090.21 </td> <td> -4.39 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217040_x_at </td> <td> 217040_x_at </td> <td> AB025355 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB025355 /DEF=Homo sapiens gene for SOX20, partial cds /FEA=CDS /DB_XREF=gi:5103146 /UG=Hs.247687 Homo sapiens gene for SOX20, partial cds </td> <td> AB025355 </td> <td> SRY (sex determining region Y)-box 15 </td> <td> SOX15 </td> <td> 6665 </td> <td> NM_006942 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006325 // chromatin organization // non-traceable author statement /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0008584 // male gonad development // traceable author statement /// 0014718 // positive regulation of satellite cell activation involved in skeletal muscle regeneration // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from sequence or structural similarity /// 0043403 // skeletal muscle tissue regeneration // inferred from electronic annotation /// 0045843 // negative regulation of striated muscle tissue development // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048627 // myoblast development // inferred from sequence or structural similarity /// 0070318 // positive regulation of G0 to G1 transition // inferred from sequence or structural similarity /// 2000288 // positive regulation of myoblast proliferation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -37.35 </td> <td> 72.70 </td> <td> -4.39 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204747_at </td> <td> 204747_at </td> <td> NM_001549 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001549.1 /DEF=Homo sapiens interferon-induced protein with tetratricopeptide repeats 4 (IFIT4), mRNA.  /FEA=mRNA /GEN=IFIT4 /PROD=interferon-induced protein withtetratricopeptide repeats 4 /DB_XREF=gi:4504586 /UG=Hs.181874 interferon-induced protein with tetratricopeptide repeats 4 /FL=gb:BC001383.1 gb:BC004977.1 gb:U52513.1 gb:AF026939.1 gb:AF083470.1 gb:NM_001549.1 </td> <td> NM_001549 </td> <td> interferon-induced protein with tetratricopeptide repeats 3 </td> <td> IFIT3 </td> <td> 3437 </td> <td> NM_001031683 /// NM_001289758 /// NM_001289759 /// NM_001549 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009615 // response to virus // inferred from mutant phenotype /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0035457 // cellular response to interferon-alpha // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -44.35 </td> <td> 46.77 </td> <td> -4.39 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212099_at </td> <td> 212099_at </td> <td> AI263909 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI263909 /FEA=EST /DB_XREF=gi:3872112 /DB_XREF=est:qi08f09.x1 /CLONE=IMAGE:1855913 /UG=Hs.204354 ras homolog gene family, member B /FL=gb:NM_004040.1 </td> <td> AI263909 </td> <td> ras homolog family member B </td> <td> RHOB </td> <td> 388 </td> <td> NM_004040 </td> <td> 0000910 // cytokinesis // inferred from mutant phenotype /// 0001525 // angiogenesis // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006927 // transformed cell apoptotic process // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008333 // endosome to lysosome transport // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045786 // negative regulation of cell cycle // inferred from sequence or structural similarity /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0071479 // cellular response to ionizing radiation // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0019003 // GDP binding // inferred from electronic annotation </td> <td> -415.25 </td> <td> 2368.25 </td> <td> -4.39 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202715_at </td> <td> 202715_at </td> <td> NM_004341 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004341.1 /DEF=Homo sapiens carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase (CAD), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=CAD /PROD=carbamoyl-phosphate synthetase 2, aspartatetranscarbamylase, and dihydroorotase /DB_XREF=gi:4757895 /UG=Hs.154868 carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase /FL=gb:D78586.1 gb:NM_004341.1 </td> <td> NM_004341 </td> <td> carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase </td> <td> CAD </td> <td> 790 </td> <td> NM_004341 /// XM_005264555 /// XM_005264556 /// XM_005264557 /// XM_005264558 /// XM_006712101 </td> <td> 0006206 // pyrimidine nucleobase metabolic process // traceable author statement /// 0006207 // 'de novo' pyrimidine nucleobase biosynthetic process // inferred from direct assay /// 0006207 // 'de novo' pyrimidine nucleobase biosynthetic process // inferred from sequence or structural similarity /// 0006221 // pyrimidine nucleotide biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006541 // glutamine metabolic process // inferred from sequence or structural similarity /// 0006543 // glutamine catabolic process // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0014075 // response to amine // inferred from electronic annotation /// 0017144 // drug metabolic process // inferred from sequence or structural similarity /// 0018107 // peptidyl-threonine phosphorylation // inferred from sequence or structural similarity /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0033574 // response to testosterone // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0044205 // 'de novo' UMP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0051414 // response to cortisol // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0070409 // carbamoyl phosphate biosynthetic process // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0042995 // cell projection // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043195 // terminal bouton // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004070 // aspartate carbamoyltransferase activity // inferred from sequence or structural similarity /// 0004070 // aspartate carbamoyltransferase activity // traceable author statement /// 0004088 // carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity // inferred from sequence or structural similarity /// 0004088 // carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity // traceable author statement /// 0004151 // dihydroorotase activity // inferred from direct assay /// 0004151 // dihydroorotase activity // inferred from sequence or structural similarity /// 0004151 // dihydroorotase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from direct assay /// 0008716 // D-alanine-D-alanine ligase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016743 // carboxyl- or carbamoyltransferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070335 // aspartate binding // inferred from sequence or structural similarity </td> <td> 51.90 </td> <td> 156.35 </td> <td> 4.39 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 64899_at </td> <td> 64899_at </td> <td> AA209463 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AA209463:zq84h11.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-648357 /clone_end=3' /gb=AA209463 /gi=1807425 /ug=Hs.6846 /len=533 </td> <td> AA209463 </td> <td> lipid phosphate phosphatase-related protein type 2 </td> <td> LPPR2 </td> <td> 64748 </td> <td> NM_001170635 /// NM_022737 /// XM_005260017 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0008195 // phosphatidate phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 62.05 </td> <td> 99.42 </td> <td> 4.39 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202559_x_at </td> <td> 202559_x_at </td> <td> AW005776 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW005776 /FEA=EST /DB_XREF=gi:5854554 /DB_XREF=est:wz89d09.x1 /CLONE=IMAGE:2566001 /UG=Hs.323817 DKFZP547E1010 protein /FL=gb:NM_015607.1 </td> <td> AW005776 </td> <td> chromatin target of PRMT1 </td> <td> CHTOP </td> <td> 26097 </td> <td> NM_001206612 /// NM_001244664 /// NM_015607 /// XM_005245085 /// XM_005245086 /// XM_006711269 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051096 // positive regulation of helicase activity // inferred from direct assay </td> <td> 0000346 // transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -162.28 </td> <td> 258.36 </td> <td> -4.38 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201038_s_at </td> <td> 201038_s_at </td> <td> T67821 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:T67821 /FEA=EST /DB_XREF=gi:678969 /DB_XREF=est:yc39d08.s1 /CLONE=IMAGE:83055 /UG=Hs.285013 putative human HLA class II associated protein I /FL=gb:U60823.1 gb:U73477.1 gb:AF025684.1 gb:NM_006305.1 </td> <td> T67821 </td> <td> acidic (leucine-rich) nuclear phosphoprotein 32 family, member A </td> <td> ANP32A </td> <td> 8125 </td> <td> NM_006305 /// XM_006720707 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 48.85 </td> <td> 72.50 </td> <td> 4.38 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202125_s_at </td> <td> 202125_s_at </td> <td> NM_015049 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015049.1 /DEF=Homo sapiens amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 3 (ALS2CR3), mRNA.  /FEA=mRNA /GEN=ALS2CR3 /PROD=amyotrophic lateral sclerosis 2 (juvenile)chromosome region, candidate 3 /DB_XREF=gi:13027379 /UG=Hs.154248 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 3 /FL=gb:AB038951.1 gb:NM_015049.1 </td> <td> NM_015049 </td> <td> trafficking protein, kinesin binding 2 </td> <td> TRAK2 </td> <td> 66008 </td> <td> NM_015049 /// XM_006712714 </td> <td> 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006493 // protein O-linked glycosylation // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity </td> <td> 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0050811 // GABA receptor binding // non-traceable author statement </td> <td> 35.17 </td> <td> 120.59 </td> <td> 4.38 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 219997_s_at </td> <td> 219997_s_at </td> <td> NM_022730 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022730.1 /DEF=Homo sapiens hypothetical protein FLJ12612 similar to COP9 (constitutive photomorphogenic), subunit 7b (Arabidopsis) (FLJ12612), mRNA.  /FEA=mRNA /GEN=FLJ12612 /PROD=hypothetical protein FLJ12612 similar to COP9(constitutive photomorphogenic), subunit 7b (Arabidopsis) /DB_XREF=gi:12232384 /UG=Hs.114432 hypothetical protein FLJ12612 similar to COP9 (constitutive photomorphogenic), subunit 7b (Arabidopsis) /FL=gb:NM_022730.1 </td> <td> NM_022730 </td> <td> COP9 signalosome subunit 7B </td> <td> COPS7B </td> <td> 64708 </td> <td> NM_001282949 /// NM_001282950 /// NM_001282951 /// NM_001282952 /// NM_022730 /// XM_006712692 /// XM_006712693 </td> <td> 0010388 // cullin deneddylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // COP9 signalosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 57.30 </td> <td> 72.25 </td> <td> 4.38 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217211_at </td> <td> 217211_at </td> <td> D50604 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D50604 /DEF=Human beta-cytoplasmic actin (ACTBP9) pseudogene /FEA=CDS /DB_XREF=gi:2094759 /UG=Hs.248007 Human beta-cytoplasmic actin (ACTBP9) pseudogene </td> <td> D50604 </td> <td> /// actin, beta pseudogene 9 </td> <td> ACTBP9 /// ACTBP9 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 85.38 </td> <td> 149.19 </td> <td> 4.38 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 208925_at </td> <td> 208925_at </td> <td> AF161522 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF161522.1 /DEF=Homo sapiens HSPC174 mRNA, complete cds. /FEA=mRNA /PROD=HSPC174 /DB_XREF=gi:6841567 /UG=Hs.107393 chromosome 3 open reading frame 4 /FL=gb:NM_019895.1 gb:AF161522.1 </td> <td> AF161522 </td> <td> claudin domain containing 1 </td> <td> CLDND1 </td> <td> 56650 </td> <td> NM_001040181 /// NM_001040182 /// NM_001040183 /// NM_001040184 /// NM_001040199 /// NM_001040200 /// NM_019895 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation </td> <td>  </td> <td> 54.52 </td> <td> 111.91 </td> <td> 4.37 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 210102_at </td> <td> 210102_at </td> <td> BC001234 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001234.1 /DEF=Homo sapiens, Similar to loss of heterozygosity, 11, chromosomal region 2, gene A, clone MGC:4904, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to loss of heterozygosity, 11,chromosomal region 2, gene A /DB_XREF=gi:12654782 /UG=Hs.152944 loss of heterozygosity, 11, chromosomal region 2, gene A /FL=gb:BC001234.1 </td> <td> BC001234 </td> <td> von Willebrand factor A domain containing 5A </td> <td> VWA5A </td> <td> 4013 </td> <td> NM_001130142 /// NM_014622 /// NM_198315 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td>  </td> <td> 35.85 </td> <td> 44.85 </td> <td> 4.37 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202633_at </td> <td> 202633_at </td> <td> NM_007027 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007027.1 /DEF=Homo sapiens topoisomerase (DNA) II binding protein (TOPBP1), mRNA. /FEA=mRNA /GEN=TOPBP1 /PROD=topoisomerase (DNA) II binding protein /DB_XREF=gi:5902137 /UG=Hs.91417 topoisomerase (DNA) II binding protein /FL=gb:AB019397.1 gb:NM_007027.1 </td> <td> NM_007027 </td> <td> topoisomerase (DNA) II binding protein 1 </td> <td> TOPBP1 </td> <td> 11073 </td> <td> NM_007027 /// XM_005247076 </td> <td> 0006259 // DNA metabolic process // traceable author statement /// 0006281 // DNA repair // non-traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from direct assay </td> <td> 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0001673 // male germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016605 // PML body // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 37.53 </td> <td> 123.94 </td> <td> 4.37 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212208_at </td> <td> 212208_at </td> <td> AK023837 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK023837.1 /DEF=Homo sapiens cDNA FLJ13775 fis, clone PLACE4000369, moderately similar to Homo sapiens thyroid hormone receptor-associated protein complex component TRAP240 mRNA.  /FEA=mRNA /DB_XREF=gi:10435894 /UG=Hs.4084 KIAA1025 protein </td> <td> AK023837 </td> <td> mediator complex subunit 13-like </td> <td> MED13L </td> <td> 23389 </td> <td> NM_015335 /// XM_006719305 /// XM_006719306 /// XM_006719307 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from electronic annotation </td> <td> 0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation </td> <td> -46.00 </td> <td> 111.78 </td> <td> -4.37 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209011_at </td> <td> 209011_at </td> <td> BF223718 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF223718 /FEA=EST /DB_XREF=gi:11130896 /DB_XREF=est:7q34g07.x1 /CLONE=IMAGE:3700405 /UG=Hs.171957 triple functional domain (PTPRF interacting) /FL=gb:AF091395.1 </td> <td> BF223718 </td> <td> trio Rho guanine nucleotide exchange factor </td> <td> TRIO </td> <td> 7204 </td> <td> NM_007118 /// XM_006714495 /// XR_241714 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043087 // regulation of GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation </td> <td> -355.62 </td> <td> 354.36 </td> <td> -4.37 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 213377_x_at </td> <td> 213377_x_at </td> <td> AI799007 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI799007 /FEA=EST /DB_XREF=gi:5364479 /DB_XREF=est:we97d07.x1 /CLONE=IMAGE:2349037 /UG=Hs.285405 ribosomal protein S12 </td> <td> AI799007 </td> <td> ribosomal protein S12 </td> <td> RPS12 </td> <td> 6206 </td> <td> NM_001016 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -677.43 </td> <td> 3499.81 </td> <td> -4.37 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 208832_at </td> <td> 208832_at </td> <td> AW241832 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW241832 /FEA=EST /DB_XREF=gi:6575586 /DB_XREF=est:xn75g09.x1 /CLONE=IMAGE:2700352 /UG=Hs.13493 like mouse brain protein E46 /FL=gb:AL050282.1 gb:AF119662.1 gb:NM_013236.1 </td> <td> AW241832 </td> <td> ataxin 10 </td> <td> ATXN10 </td> <td> 25814 </td> <td> NM_001167621 /// NM_013236 </td> <td> 0007399 // nervous system development // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> 39.65 </td> <td> 93.90 </td> <td> 4.36 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201548_s_at </td> <td> 201548_s_at </td> <td> W02593 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W02593 /FEA=EST /DB_XREF=gi:1274571 /DB_XREF=est:za51e06.r1 /CLONE=IMAGE:296098 /UG=Hs.143323 putative DNAchromatin binding motif /FL=gb:NM_006618.1 </td> <td> W02593 </td> <td> lysine (K)-specific demethylase 5B </td> <td> KDM5B </td> <td> 10765 </td> <td> NM_006618 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from direct assay /// 0034721 // histone H3-K4 demethylation, trimethyl-H3-K4-specific // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0032453 // histone demethylase activity (H3-K4 specific) // inferred from electronic annotation /// 0034647 // histone demethylase activity (H3-trimethyl-K4 specific) // inferred from direct assay /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -115.92 </td> <td> 183.04 </td> <td> -4.36 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 211197_s_at </td> <td> 211197_s_at </td> <td> AL355690 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL355690.1 /DEF=Homo sapiens EST from clone 34465, full insert. /FEA=mRNA /DB_XREF=gi:7799138 /UG=Hs.14155 KIAA0653 protein, B7-like protein /FL=gb:AF216749.1 gb:AF289028.1 </td> <td> AL355690 </td> <td> inducible T-cell co-stimulator ligand </td> <td> ICOSLG </td> <td> 23308 </td> <td> NM_001283050 /// NM_001283051 /// NM_001283052 /// NM_015259 /// XM_005261098 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006952 // defense response // non-traceable author statement /// 0006972 // hyperosmotic response // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0042104 // positive regulation of activated T cell proliferation // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0042113 // B cell activation // inferred from electronic annotation /// 0045404 // positive regulation of interleukin-4 biosynthetic process // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -37.60 </td> <td> 28.07 </td> <td> -4.36 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217388_s_at </td> <td> 217388_s_at </td> <td> D55639 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D55639.1 /DEF=Human monocyte PABL (pseudoautosomal boundary-like sequence) mRNA, clone Mo1.  /FEA=mRNA /DB_XREF=gi:1255614 /UG=Hs.169139 kynureninase (L-kynurenine hydrolase) </td> <td> D55639 </td> <td> kynureninase </td> <td> KYNU </td> <td> 8942 </td> <td> NM_001032998 /// NM_001199241 /// NM_003937 </td> <td> 0006569 // tryptophan catabolic process // inferred from mutant phenotype /// 0006569 // tryptophan catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009435 // NAD biosynthetic process // inferred from electronic annotation /// 0019363 // pyridine nucleotide biosynthetic process // inferred from electronic annotation /// 0019441 // tryptophan catabolic process to kynurenine // inferred from electronic annotation /// 0019442 // tryptophan catabolic process to acetyl-CoA // inferred from electronic annotation /// 0019805 // quinolinate biosynthetic process // inferred from direct assay /// 0034341 // response to interferon-gamma // inferred from direct assay /// 0034354 // 'de novo' NAD biosynthetic process from tryptophan // inferred from electronic annotation /// 0034516 // response to vitamin B6 // inferred from mutant phenotype /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043420 // anthranilate metabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0097053 // L-kynurenine catabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0030429 // kynureninase activity // inferred from direct assay /// 0030429 // kynureninase activity // inferred from mutant phenotype /// 0030429 // kynureninase activity // traceable author statement /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> -35.12 </td> <td> 19.66 </td> <td> -4.36 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 221702_s_at </td> <td> 221702_s_at </td> <td> AF353992 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF353992.1 /DEF=Homo sapiens BBP-like protein 2 (BLP2) mRNA, complete cds. /FEA=mRNA /GEN=BLP2 /PROD=BBP-like protein 2 /DB_XREF=gi:13625462 /FL=gb:AF353992.1 </td> <td> AF353992 </td> <td> TM2 domain containing 3 </td> <td> TM2D3 </td> <td> 80213 </td> <td> NM_025141 /// NM_078474 /// XM_005254980 /// XM_005254981 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 54.38 </td> <td> 183.46 </td> <td> 4.36 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 221477_s_at </td> <td> 221477_s_at </td> <td> BF575213 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF575213 /FEA=EST /DB_XREF=gi:11648925 /DB_XREF=est:602133624F1 /CLONE=IMAGE:4288756 /UG=Hs.177781 Homo sapiens, clone MGC:5618, mRNA, complete cds /FL=gb:BC001980.1 </td> <td> BF575213 </td> <td> uncharacterized LOC100129518 /// superoxide dismutase 2, mitochondrial </td> <td> LOC100129518 /// SOD2 </td> <td> 6648 /// 100129518 </td> <td> NM_000636 /// NM_001024465 /// NM_001024466 /// NR_037166 </td> <td> 0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0000303 // response to superoxide // inferred from mutant phenotype /// 0001306 // age-dependent response to oxidative stress // inferred from electronic annotation /// 0001315 // age-dependent response to reactive oxygen species // inferred from mutant phenotype /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0003032 // detection of oxygen // inferred from electronic annotation /// 0003069 // vasodilation by acetylcholine involved in regulation of systemic arterial blood pressure // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006801 // superoxide metabolic process // inferred from direct assay /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0008631 // intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from electronic annotation /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010042 // response to manganese ion // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010269 // response to selenium ion // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0019430 // removal of superoxide radicals // inferred from mutant phenotype /// 0022904 // respiratory electron transport chain // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032364 // oxygen homeostasis // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0034021 // response to silicon dioxide // inferred from electronic annotation /// 0042311 // vasodilation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0042743 // hydrogen peroxide metabolic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0048773 // erythrophore differentiation // inferred from electronic annotation /// 0050665 // hydrogen peroxide biosynthetic process // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from physical interaction /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071361 // cellular response to ethanol // inferred from electronic annotation /// 1902176 // negative regulation of intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0042645 // mitochondrial nucleoid // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0004784 // superoxide dismutase activity // inferred from direct assay /// 0004784 // superoxide dismutase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019825 // oxygen binding // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0030145 // manganese ion binding // traceable author statement /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -810.72 </td> <td> 469.24 </td> <td> -4.35 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204339_s_at </td> <td> 204339_s_at </td> <td> BC000737 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000737.1 /DEF=Homo sapiens, regulator of G-protein signalling 4, clone MGC:2124, mRNA, complete cds.  /FEA=mRNA /PROD=regulator of G-protein signalling 4 /DB_XREF=gi:12653888 /UG=Hs.227571 regulator of G-protein signalling 4 /FL=gb:NM_005613.2 gb:BC000737.1 </td> <td> BC000737 </td> <td> regulator of G-protein signaling 4 </td> <td> RGS4 </td> <td> 5999 </td> <td> NM_001102445 /// NM_001113380 /// NM_001113381 /// NM_005613 </td> <td> 0000188 // inactivation of MAPK activity // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // not recorded /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // not recorded /// 0005516 // calmodulin binding // traceable author statement </td> <td> 70.90 </td> <td> 172.97 </td> <td> 4.35 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201327_s_at </td> <td> 201327_s_at </td> <td> NM_001762 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001762.1 /DEF=Homo sapiens chaperonin containing TCP1, subunit 6A (zeta 1) (CCT6A), mRNA.  /FEA=mRNA /GEN=CCT6A /PROD=chaperonin containing TCP1, subunit 6A (zeta 1) /DB_XREF=gi:4502642 /UG=Hs.82916 chaperonin containing TCP1, subunit 6A (zeta 1) /FL=gb:M94083.1 gb:NM_001762.1 gb:L27706.1 </td> <td> NM_001762 </td> <td> chaperonin containing TCP1, subunit 6A (zeta 1) </td> <td> CCT6A </td> <td> 908 </td> <td> NM_001009186 /// NM_001762 </td> <td> 0006457 // protein folding // traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0002199 // zona pellucida receptor complex // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 99.40 </td> <td> 403.48 </td> <td> 4.35 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201801_s_at </td> <td> 201801_s_at </td> <td> AF079117 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF079117.1 /DEF=Homo sapiens equilibrative NBMPR-sensitive nucleoside transporter (ENT1) mRNA, complete cds.  /FEA=mRNA /GEN=ENT1 /PROD=equilibrative NBMPR-sensitive nucleosidetransporter /DB_XREF=gi:3694939 /UG=Hs.25450 solute carrier family 29 (nucleoside transporters), member 1 /FL=gb:BC001382.1 gb:U81375.1 gb:AF079117.1 gb:NM_004955.1 </td> <td> AF079117 </td> <td> solute carrier family 29 (equilibrative nucleoside transporter), member 1 </td> <td> SLC29A1 </td> <td> 2030 </td> <td> NM_001078174 /// NM_001078175 /// NM_001078176 /// NM_001078177 /// NM_004955 /// XM_005248875 /// XM_005248876 /// XM_005248878 /// XM_005248879 /// XM_005248880 /// XM_005248881 /// XM_005248882 </td> <td> 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0015858 // nucleoside transport // inferred from direct assay /// 0015862 // uridine transport // inferred from electronic annotation /// 0030431 // sleep // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 1901642 // nucleoside transmembrane transport // inferred from electronic annotation /// 1901642 // nucleoside transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay </td> <td> 0005337 // nucleoside transmembrane transporter activity // inferred from electronic annotation </td> <td> 140.93 </td> <td> 348.79 </td> <td> 4.35 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209021_x_at </td> <td> 209021_x_at </td> <td> BC001331 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001331.1 /DEF=Homo sapiens, Similar to KIAA0652 gene product, clone MGC:5568, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to KIAA0652 gene product /DB_XREF=gi:12654966 /UG=Hs.79672 KIAA0652 gene product /FL=gb:BC001331.1 gb:BC002378.1 </td> <td> BC001331 </td> <td> autophagy related 13 </td> <td> ATG13 </td> <td> 9776 </td> <td> NM_001142673 /// NM_001205119 /// NM_001205120 /// NM_001205121 /// NM_001205122 /// NM_014741 /// XM_005253262 /// XM_005253263 /// XM_005253265 /// XM_005253266 /// XM_005253268 /// XM_006718394 /// XM_006718395 /// XM_006718396 </td> <td> 0000045 // autophagic vacuole assembly // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation </td> <td> 0000407 // pre-autophagosomal structure // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0034273 // Atg1p signaling complex //  /// 0070969 // ULK1-ATG13-FIP200 complex // inferred from physical interaction </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> -62.58 </td> <td> 60.19 </td> <td> -4.35 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 214212_x_at </td> <td> 214212_x_at </td> <td> AI928241 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI928241 /FEA=EST /DB_XREF=gi:5664205 /DB_XREF=est:wo95g11.x1 /CLONE=IMAGE:2463140 /UG=Hs.75260 mitogen inducible 2 </td> <td> AI928241 </td> <td> fermitin family member 2 </td> <td> FERMT2 </td> <td> 10979 </td> <td> NM_001134999 /// NM_001135000 /// NM_006832 /// XM_005267285 /// XM_006720008 /// XM_006720009 /// XM_006720010 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007160 // cell-matrix adhesion // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007229 // integrin-mediated signaling pathway // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0033622 // integrin activation // inferred from mutant phenotype /// 0034329 // cell junction assembly // traceable author statement /// 0034446 // substrate adhesion-dependent cell spreading // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from sequence or structural similarity /// 0072657 // protein localization to membrane // inferred from sequence or structural similarity </td> <td> 0001725 // stress fiber // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from direct assay /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0031674 // I band // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation </td> <td> -45.15 </td> <td> 108.47 </td> <td> -4.35 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201388_at </td> <td> 201388_at </td> <td> NM_002809 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002809.1 /DEF=Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 (PSMD3), mRNA.  /FEA=mRNA /GEN=PSMD3 /PROD=proteasome (prosome, macropain) 26S subunit,non-ATPase, 3 /DB_XREF=gi:4506228 /UG=Hs.9736 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 /FL=gb:BC000074.1 gb:BC004859.1 gb:D67025.1 gb:AF091075.1 gb:NM_002809.1 </td> <td> NM_002809 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 </td> <td> PSMD3 </td> <td> 5709 </td> <td> NM_002809 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation </td> <td> 56.28 </td> <td> 189.51 </td> <td> 4.35 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 200670_at </td> <td> 200670_at </td> <td> NM_005080 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005080.1 /DEF=Homo sapiens X-box binding protein 1 (XBP1), mRNA. /FEA=mRNA /GEN=XBP1 /PROD=X-box binding protein 1 /DB_XREF=gi:4827057 /UG=Hs.149923 X-box binding protein 1 /FL=gb:BC000938.1 gb:M31627.1 gb:NM_005080.1 </td> <td> NM_005080 </td> <td> X-box binding protein 1 </td> <td> XBP1 </td> <td> 7494 </td> <td> NM_001079539 /// NM_005080 </td> <td> 0002070 // epithelial cell maturation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0060096 // serotonin secretion, neurotransmission // inferred from electronic annotation /// 0060691 // epithelial cell maturation involved in salivary gland development // inferred from electronic annotation /// 0071236 // cellular response to antibiotic // inferred from electronic annotation /// 1900103 // positive regulation of endoplasmic reticulum unfolded protein response // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -143.15 </td> <td> 301.62 </td> <td> -4.35 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 200698_at </td> <td> 200698_at </td> <td> AL542253 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL542253 /FEA=EST /DB_XREF=gi:12874115 /DB_XREF=est:AL542253 /CLONE=CS0DE008YC08 (3 prime) /UG=Hs.118778 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 /FL=gb:NM_006854.2 </td> <td> AL542253 </td> <td> KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 </td> <td> KDELR2 </td> <td> 11014 </td> <td> NM_001100603 /// NM_006854 </td> <td> 0006621 // protein retention in ER lumen // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005801 // cis-Golgi network // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005046 // KDEL sequence binding // traceable author statement /// 0046923 // ER retention sequence binding // inferred from electronic annotation </td> <td> 236.77 </td> <td> 748.71 </td> <td> 4.34 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201775_s_at </td> <td> 201775_s_at </td> <td> AA676790 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA676790 /FEA=EST /DB_XREF=gi:2657312 /DB_XREF=est:zj64h12.s1 /CLONE=IMAGE:455111 /UG=Hs.62515 KIAA0494 gene product /FL=gb:BC002525.1 gb:AB007963.1 gb:NM_014774.1 </td> <td> AA676790 </td> <td> EF-hand calcium binding domain 14 </td> <td> EFCAB14 </td> <td> 9813 </td> <td> NM_014774 </td> <td>  </td> <td>  </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 52.58 </td> <td> 149.31 </td> <td> 4.34 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 215253_s_at </td> <td> 215253_s_at </td> <td> AL049369 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049369.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586D0518 (from clone DKFZp586D0518). /FEA=mRNA /DB_XREF=gi:4500160 /UG=Hs.250724 Homo sapiens mRNA; cDNA DKFZp586D0518 (from clone DKFZp586D0518) </td> <td> AL049369 </td> <td> regulator of calcineurin 1 </td> <td> RCAN1 </td> <td> 1827 </td> <td> NM_001285389 /// NM_001285391 /// NM_001285392 /// NM_001285393 /// NM_004414 /// NM_203417 /// NM_203418 /// XM_005260929 /// XM_005260930 </td> <td> 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0043627 // response to estrogen // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -80.20 </td> <td> 111.30 </td> <td> -4.34 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 219620_x_at </td> <td> 219620_x_at </td> <td> NM_017723 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017723.1 /DEF=Homo sapiens hypothetical protein FLJ20245 (FLJ20245), mRNA. /FEA=mRNA /GEN=FLJ20245 /PROD=hypothetical protein FLJ20245 /DB_XREF=gi:8923220 /UG=Hs.169758 hypothetical protein FLJ20245 /FL=gb:NM_017723.1 </td> <td> NM_017723 </td> <td> torsin family 4, member A </td> <td> TOR4A </td> <td> 54863 </td> <td> NM_017723 </td> <td> 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> 54.05 </td> <td> 75.17 </td> <td> 4.34 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212014_x_at </td> <td> 212014_x_at </td> <td> AI493245 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI493245 /FEA=EST /DB_XREF=gi:4394248 /DB_XREF=est:ti30d08.x1 /CLONE=IMAGE:2131983 /UG=Hs.169610 CD44 antigen (homing function and Indian blood group system) </td> <td> AI493245 </td> <td> CD44 molecule (Indian blood group) </td> <td> CD44 </td> <td> 960 </td> <td> NM_000610 /// NM_001001389 /// NM_001001390 /// NM_001001391 /// NM_001001392 /// NM_001202555 /// NM_001202556 /// NM_001202557 /// XM_005253231 /// XM_005253232 /// XM_005253233 /// XM_005253234 /// XM_005253235 /// XM_005253238 /// XM_005253239 /// XM_005253240 /// XM_006718388 /// XM_006718389 /// XM_006718390 </td> <td> 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0002246 // wound healing involved in inflammatory response // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030212 // hyaluronan metabolic process // traceable author statement /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0030214 // hyaluronan catabolic process // traceable author statement /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0051216 // cartilage development // inferred from expression pattern /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060442 // branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070487 // monocyte aggregation // inferred from mutant phenotype /// 1900625 // positive regulation of monocyte aggregation // inferred from mutant phenotype /// 1902166 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004415 // hyalurononglucosaminidase activity // inferred from direct assay /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0005540 // hyaluronic acid binding // inferred from direct assay /// 0005540 // hyaluronic acid binding // non-traceable author statement </td> <td> -43.38 </td> <td> 61.71 </td> <td> -4.34 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209326_at </td> <td> 209326_at </td> <td> D84454 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D84454.1 /DEF=Human mRNA for UDP-galactose translocator, complete cds. /FEA=mRNA /PROD=UDP-galactose translocator /DB_XREF=gi:1526437 /UG=Hs.21899 solute carrier family 35 (UDP-galactose transporter), member 2 /FL=gb:D84454.1 </td> <td> D84454 </td> <td> solute carrier family 35 (UDP-galactose transporter), member A2 </td> <td> SLC35A2 </td> <td> 7355 </td> <td> NM_001032289 /// NM_001042498 /// NM_001282647 /// NM_001282648 /// NM_001282649 /// NM_001282650 /// NM_001282651 /// NM_005660 </td> <td> 0006012 // galactose metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015780 // nucleotide-sugar transport // inferred from electronic annotation /// 0015785 // UDP-galactose transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0072334 // UDP-galactose transmembrane transport // inferred from electronic annotation /// 1901679 // nucleotide transmembrane transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005338 // nucleotide-sugar transmembrane transporter activity // inferred from electronic annotation /// 0005351 // sugar:proton symporter activity // inferred from electronic annotation /// 0005459 // UDP-galactose transmembrane transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 38.12 </td> <td> 96.19 </td> <td> 4.34 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 219737_s_at </td> <td> 219737_s_at </td> <td> AI524125 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI524125 /FEA=EST /DB_XREF=gi:4438260 /DB_XREF=est:th09d11.x1 /CLONE=IMAGE:2117781 /UG=Hs.12450 protocadherin 9 /FL=gb:AF169692.2 gb:NM_020403.1 </td> <td> AI524125 </td> <td> protocadherin 9 </td> <td> PCDH9 </td> <td> 5101 </td> <td> NM_020403 /// NM_203487 /// XM_005266406 /// XM_005266407 /// XM_005266408 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 46.30 </td> <td> 45.77 </td> <td> 4.34 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209820_s_at </td> <td> 209820_s_at </td> <td> BC002361 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002361.1 /DEF=Homo sapiens, Similar to transducin (beta)-like 3, clone MGC:8613, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to transducin (beta)-like 3 /DB_XREF=gi:12803114 /UG=Hs.322490 Homo sapiens, Similar to transducin (beta)-like 3, clone MGC:8613, mRNA, complete cds /FL=gb:BC002361.1 </td> <td> BC002361 </td> <td> transducin (beta)-like 3 </td> <td> TBL3 </td> <td> 10607 </td> <td> NM_006453 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation /// 0006801 // superoxide metabolic process // inferred from electronic annotation /// 0007199 // G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger // traceable author statement /// 0010310 // regulation of hydrogen peroxide metabolic process // traceable author statement /// 0022617 // extracellular matrix disassembly // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0060263 // regulation of respiratory burst // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032040 // small-subunit processome // inferred from electronic annotation /// 0043020 // NADPH oxidase complex // inferred from direct assay </td> <td> 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0016176 // superoxide-generating NADPH oxidase activator activity // inferred from electronic annotation /// 0016176 // superoxide-generating NADPH oxidase activator activity // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 38.70 </td> <td> 45.17 </td> <td> 4.33 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204363_at </td> <td> 204363_at </td> <td> NM_001993 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001993.2 /DEF=Homo sapiens coagulation factor III (thromboplastin, tissue factor) (F3), mRNA.  /FEA=mRNA /GEN=F3 /PROD=coagulation factor III precursor /DB_XREF=gi:10518499 /UG=Hs.62192 coagulation factor III (thromboplastin, tissue factor) /FL=gb:NM_001993.2 gb:J02931.1 gb:M16553.1 gb:M27436.1 </td> <td> NM_001993 </td> <td> coagulation factor III (thromboplastin, tissue factor) </td> <td> F3 </td> <td> 2152 </td> <td> NM_001178096 /// NM_001993 </td> <td> 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0002541 // activation of plasma proteins involved in acute inflammatory response // inferred from direct assay /// 0002543 // activation of blood coagulation via clotting cascade // inferred by curator /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007596 // blood coagulation // traceable author statement /// 0007598 // blood coagulation, extrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0010641 // positive regulation of platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0030335 // positive regulation of cell migration // traceable author statement /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0050927 // positive regulation of positive chemotaxis // inferred by curator /// 0051897 // positive regulation of protein kinase B signaling // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031233 // intrinsic component of external side of plasma membrane // inferred by curator /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from direct assay </td> <td> -55.00 </td> <td> 36.83 </td> <td> -4.33 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212190_at </td> <td> 212190_at </td> <td> AL541302 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL541302 /FEA=EST /DB_XREF=gi:12872241 /DB_XREF=est:AL541302 /CLONE=CS0DE006YI10 (5 prime) /UG=Hs.21858 trinucleotide repeat containing 3 </td> <td> AL541302 </td> <td> serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 </td> <td> SERPINE2 </td> <td> 5270 </td> <td> NM_001136528 /// NM_001136530 /// NM_006216 /// NR_073116 /// XM_005246641 /// XM_005246642 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010544 // negative regulation of platelet activation // inferred from electronic annotation /// 0010757 // negative regulation of plasminogen activation // inferred from mutant phenotype /// 0010766 // negative regulation of sodium ion transport // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0010955 // negative regulation of protein processing // inferred by curator /// 0014067 // negative regulation of phosphatidylinositol 3-kinase signaling // inferred from electronic annotation /// 0021683 // cerebellar granular layer morphogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030195 // negative regulation of blood coagulation // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0030334 // regulation of cell migration // non-traceable author statement /// 0032940 // secretion by cell // inferred from electronic annotation /// 0033363 // secretory granule organization // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation /// 0042628 // mating plug formation // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // inferred from direct assay /// 0045879 // negative regulation of smoothened signaling pathway // inferred from electronic annotation /// 0048505 // regulation of timing of cell differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from direct assay /// 0050974 // detection of mechanical stimulus involved in sensory perception // inferred from electronic annotation /// 0051966 // regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0060384 // innervation // inferred from electronic annotation /// 0061108 // seminal vesicle epithelium development // inferred from electronic annotation /// 0090331 // negative regulation of platelet aggregation // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005615 // extracellular space // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031091 // platelet alpha granule // inferred from mutant phenotype /// 0031232 // extrinsic component of external side of plasma membrane // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from sequence or structural similarity </td> <td> 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005539 // glycosaminoglycan binding // inferred from direct assay /// 0008201 // heparin binding // inferred from direct assay /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> -101.15 </td> <td> 299.80 </td> <td> -4.33 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209086_x_at </td> <td> 209086_x_at </td> <td> BE964361 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE964361 /FEA=EST /DB_XREF=gi:11767830 /DB_XREF=est:601658062R1 /CLONE=IMAGE:3876255 /UG=Hs.211579 melanoma adhesion molecule /FL=gb:AF089868.1 gb:NM_006500.1 </td> <td> BE964361 </td> <td> melanoma cell adhesion molecule /// microRNA 6756 </td> <td> MCAM /// MIR6756 </td> <td> 4162 /// 102465453 </td> <td> NM_006500 /// NR_106814 /// XM_005271551 /// XM_005271552 /// XM_006718836 /// XM_006718837 /// XM_006718838 </td> <td> 0003094 // glomerular filtration // inferred from expression pattern /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0061042 // vascular wound healing // inferred from expression pattern </td> <td> 0005886 // plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 211.92 </td> <td> 607.41 </td> <td> 4.33 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 219981_x_at </td> <td> 219981_x_at </td> <td> NM_017961 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017961.1 /DEF=Homo sapiens hypothetical protein FLJ20813 (FLJ20813), mRNA. /FEA=mRNA /GEN=FLJ20813 /PROD=hypothetical protein FLJ20813 /DB_XREF=gi:8923685 /UG=Hs.306203 hypothetical protein FLJ20813 /FL=gb:NM_017961.1 </td> <td> NM_017961 </td> <td> zinc finger protein 587 </td> <td> ZNF587 </td> <td> 84914 </td> <td> NM_001204817 /// NM_032828 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 57.25 </td> <td> 107.42 </td> <td> 4.33 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202487_s_at </td> <td> 202487_s_at </td> <td> NM_012412 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012412.1 /DEF=Homo sapiens purine-rich element binding protein B (PURB), mRNA. /FEA=mRNA /GEN=PURB /PROD=purine-rich element binding protein B /DB_XREF=gi:6912615 /UG=Hs.301005 purine-rich element binding protein B /FL=gb:BC000098.1 gb:BC004274.1 gb:AF081192.1 gb:NM_012412.1 </td> <td> NM_012412 </td> <td> H2A histone family, member V </td> <td> H2AFV </td> <td> 94239 </td> <td> NM_012412 /// NM_138635 /// NM_201436 /// NM_201516 /// NM_201517 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation </td> <td> 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -239.18 </td> <td> 689.24 </td> <td> -4.33 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 211458_s_at </td> <td> 211458_s_at </td> <td> AF180519 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF180519.1 /DEF=Homo sapiens GABA-A receptor-associated protein mRNA, complete cds. /FEA=mRNA /PROD=GABA-A receptor-associated protein /DB_XREF=gi:13241283 /UG=Hs.326776 Homo sapiens GABA-A receptor-associated protein mRNA, complete cds /FL=gb:AF180519.1 </td> <td> AF180519 </td> <td> GABA(A) receptor-associated protein like 1 /// GABA(A) receptors associated protein like 3, pseudogene </td> <td> GABARAPL1 /// GABARAPL3 </td> <td> 23710 /// 23766 </td> <td> NM_031412 /// NR_028287 /// XM_005253344 </td> <td> 0000045 // autophagic vacuole assembly // not recorded /// 0000422 // mitochondrion degradation // not recorded /// 0006914 // autophagy // inferred from electronic annotation /// 0012501 // programmed cell death // not recorded /// 0032258 // CVT pathway // not recorded /// 0034727 // piecemeal microautophagy of nucleus // not recorded /// 0044805 // late nucleophagy // not recorded /// 0071211 // protein targeting to vacuole involved in autophagy // not recorded </td> <td> 0000407 // pre-autophagosomal structure // not recorded /// 0000421 // autophagic vacuole membrane // not recorded /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032590 // dendrite membrane // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // not recorded /// 0008429 // phosphatidylethanolamine binding // not recorded /// 0048487 // beta-tubulin binding // inferred from sequence or structural similarity /// 0050811 // GABA receptor binding // not recorded /// 0050811 // GABA receptor binding // inferred from sequence or structural similarity </td> <td> -122.23 </td> <td> 224.54 </td> <td> -4.33 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 200041_s_at </td> <td> 200041_s_at </td> <td> NM_004640 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004640.1 /DEF=Homo sapiens HLA-B associated transcript-1 (D6S81E), mRNA. /FEA=mRNA /GEN=D6S81E /PROD=HLA-B associated transcript-1 /DB_XREF=gi:4758111 /UG=Hs.55296 HLA-B associated transcript-1 /FL=gb:BC004350.1 gb:NM_004640.1 </td> <td> NM_004640 </td> <td> ATP6V1G2-DDX39B readthrough (NMD candidate) /// DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B /// small nucleolar RNA, C/D box 84 </td> <td> ATP6V1G2-DDX39B /// DDX39B /// SNORD84 </td> <td> 7919 /// 692199 /// 100532737 </td> <td> NM_004640 /// NM_080598 /// NR_003065 /// NR_037852 /// NR_037853 </td> <td> 0000245 // spliceosomal complex assembly // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // inferred from genetic interaction /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006406 // mRNA export from nucleus // inferred from genetic interaction /// 0006810 // transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0010501 // RNA secondary structure unwinding // inferred from direct assay /// 0015992 // proton transport // inferred from electronic annotation /// 0032786 // positive regulation of DNA-templated transcription, elongation // inferred from mutant phenotype /// 0046784 // viral mRNA export from host cell nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 2000002 // negative regulation of DNA damage checkpoint // inferred from mutant phenotype </td> <td> 0000346 // transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005687 // U4 snRNP // inferred from direct assay /// 0005688 // U6 snRNP // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008186 // RNA-dependent ATPase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0017070 // U6 snRNA binding // inferred from direct assay /// 0030621 // U4 snRNA binding // inferred from direct assay /// 0043008 // ATP-dependent protein binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -312.15 </td> <td> 1329.62 </td> <td> -4.33 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204395_s_at </td> <td> 204395_s_at </td> <td> AI338653 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI338653 /FEA=EST /DB_XREF=gi:4075580 /DB_XREF=est:qt52e03.x1 /CLONE=IMAGE:1951612 /UG=Hs.211569 G protein-coupled receptor kinase 5 /FL=gb:L15388.1 gb:NM_005308.1 </td> <td> AI338653 </td> <td> G protein-coupled receptor kinase 5 </td> <td> GRK5 </td> <td> 2869 </td> <td> NM_005308 /// XM_005269707 /// XM_005269708 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007217 // tachykinin receptor signaling pathway // inferred from direct assay /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004703 // G-protein coupled receptor kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -53.60 </td> <td> 131.78 </td> <td> -4.33 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217741_s_at </td> <td> 217741_s_at </td> <td> AW471220 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW471220 /FEA=EST /DB_XREF=gi:7041326 /DB_XREF=est:xv13g08.x1 /CLONE=IMAGE:2813054 /UG=Hs.3776 zinc finger protein 216 /FL=gb:AF062346.1 gb:NM_006007.1 </td> <td> AW471220 </td> <td> zinc finger, AN1-type domain 5 </td> <td> ZFAND5 </td> <td> 7763 </td> <td> NM_001102420 /// NM_001102421 /// NM_001278243 /// NM_001278244 /// NM_001278245 /// NM_006007 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0060324 // face development // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -275.28 </td> <td> 665.79 </td> <td> -4.32 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 208985_s_at </td> <td> 208985_s_at </td> <td> BC002719 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002719.1 /DEF=Homo sapiens, eukaryotic translation initiation factor 3, subunit 1 (alpha, 35kD), clone MGC:3801, mRNA, complete cds.  /FEA=mRNA /PROD=eukaryotic translation initiation factor 3,subunit 1 (alpha, 35kD) /DB_XREF=gi:12803762 /UG=Hs.173987 eukaryotic translation initiation factor 3, subunit 1 (alpha, 35kD) /FL=gb:BC002719.1 gb:AF090923.1 </td> <td> BC002719 </td> <td> eukaryotic translation initiation factor 3, subunit J </td> <td> EIF3J </td> <td> 8669 </td> <td> NM_001284335 /// NM_001284336 /// NM_003758 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation </td> <td> 0003743 // translation initiation factor activity // inferred by curator /// 0005515 // protein binding // inferred from physical interaction </td> <td> 59.90 </td> <td> 364.90 </td> <td> 4.32 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218157_x_at </td> <td> 218157_x_at </td> <td> NM_020239 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020239.2 /DEF=Homo sapiens small protein effector 1 of Cdc42 (SPEC1), mRNA. /FEA=mRNA /GEN=SPEC1 /PROD=small protein effector 1 of Cdc42 /DB_XREF=gi:12965169 /UG=Hs.22065 small protein effector 1 of Cdc42 /FL=gb:AF187845.2 gb:NM_020239.2 </td> <td> NM_020239 </td> <td> CDC42 small effector 1 </td> <td> CDC42SE1 </td> <td> 56882 </td> <td> NM_001038707 /// NM_020239 </td> <td> 0006909 // phagocytosis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005095 // GTPase inhibitor activity // traceable author statement </td> <td> 134.57 </td> <td> 203.36 </td> <td> 4.32 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202964_s_at </td> <td> 202964_s_at </td> <td> NM_000449 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000449.1 /DEF=Homo sapiens regulatory factor X, 5 (influences HLA class II expression) (RFX5), mRNA.  /FEA=mRNA /GEN=RFX5 /PROD=regulatory factor X, 5 /DB_XREF=gi:4557842 /UG=Hs.166891 regulatory factor X, 5 (influences HLA class II expression) /FL=gb:NM_000449.1 </td> <td> NM_000449 </td> <td> regulatory factor X, 5 (influences HLA class II expression) </td> <td> RFX5 </td> <td> 5993 </td> <td> NM_000449 /// NM_001025603 /// XM_005245405 /// XM_005245406 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 45.62 </td> <td> 85.71 </td> <td> 4.32 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203035_s_at </td> <td> 203035_s_at </td> <td> NM_006099 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006099.1 /DEF=Homo sapiens protein inhibitor of activated STAT3 (PIAS3), mRNA. /FEA=mRNA /GEN=PIAS3 /PROD=protein inhibitor of activated STAT3 /DB_XREF=gi:5174628 /UG=Hs.76578 protein inhibitor of activated STAT3 /FL=gb:BC001154.1 gb:AB021868.1 gb:NM_006099.1 </td> <td> NM_006099 </td> <td> protein inhibitor of activated STAT, 3 </td> <td> PIAS3 </td> <td> 10401 </td> <td> NM_006099 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009725 // response to hormone // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from sequence or structural similarity /// 0033235 // positive regulation of protein sumoylation // inferred from direct assay /// 0045838 // positive regulation of membrane potential // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0051059 // NF-kappaB binding // inferred from physical interaction </td> <td> 42.87 </td> <td> 84.99 </td> <td> 4.31 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 200703_at </td> <td> 200703_at </td> <td> NM_003746 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003746.1 /DEF=Homo sapiens dynein, cytoplasmic, light polypeptide (PIN), mRNA. /FEA=mRNA /GEN=PIN /PROD=dynein, cytoplasmic, light polypeptide /DB_XREF=gi:4505812 /UG=Hs.5120 dynein, cytoplasmic, light polypeptide /FL=gb:U32944.1 gb:NM_003746.1 </td> <td> NM_003746 </td> <td> dynein, light chain, LC8-type 1 </td> <td> DYNLL1 </td> <td> 8655 </td> <td> NM_001037494 /// NM_001037495 /// NM_003746 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007292 // female gamete generation // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from sequence or structural similarity /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0008180 // COP9 signalosome // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay </td> <td> 0003774 // motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030235 // nitric-oxide synthase regulator activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation </td> <td> 709.00 </td> <td> 1513.65 </td> <td> 4.31 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218516_s_at </td> <td> 218516_s_at </td> <td> NM_017813 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017813.1 /DEF=Homo sapiens hypothetical protein FLJ20421 (FLJ20421), mRNA. /FEA=mRNA /GEN=FLJ20421 /PROD=hypothetical protein FLJ20421 /DB_XREF=gi:8923391 /UG=Hs.263727 hypothetical protein FLJ20421 /FL=gb:NM_017813.1 </td> <td> NM_017813 </td> <td> inositol monophosphatase domain containing 1 </td> <td> IMPAD1 </td> <td> 54928 </td> <td> NM_017813 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0006021 // inositol biosynthetic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030204 // chondroitin sulfate metabolic process // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0008254 // 3'-nucleotidase activity // inferred from electronic annotation /// 0008441 // 3'(2'),5'-bisphosphate nucleotidase activity // inferred from electronic annotation /// 0008934 // inositol monophosphate 1-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052832 // inositol monophosphate 3-phosphatase activity // inferred from electronic annotation /// 0052833 // inositol monophosphate 4-phosphatase activity // inferred from electronic annotation /// 0052834 // inositol monophosphate phosphatase activity // inferred from electronic annotation </td> <td> -61.62 </td> <td> 183.99 </td> <td> -4.30 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209088_s_at </td> <td> 209088_s_at </td> <td> T70262 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:T70262 /FEA=EST /DB_XREF=gi:681410 /DB_XREF=est:yd26b11.s1 /CLONE=IMAGE:109341 /UG=Hs.21479 ubinuclein 1 /FL=gb:AF108461.1 </td> <td> T70262 </td> <td> ubinuclein 1 </td> <td> UBN1 </td> <td> 29855 </td> <td> NM_001079514 /// NM_001288656 /// NM_016936 /// XM_005255277 /// XM_005255278 /// XM_005255279 /// XM_005255280 /// XM_005255283 </td> <td> 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0016605 // PML body // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 46.40 </td> <td> 125.97 </td> <td> 4.30 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203201_at </td> <td> 203201_at </td> <td> NM_000303 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000303.1 /DEF=Homo sapiens phosphomannomutase 2 (PMM2), mRNA. /FEA=mRNA /GEN=PMM2 /PROD=phosphomannomutase 2 /DB_XREF=gi:4557838 /UG=Hs.154695 phosphomannomutase 2 /FL=gb:U85773.1 gb:NM_000303.1 </td> <td> NM_000303 </td> <td> phosphomannomutase 2 </td> <td> PMM2 </td> <td> 5373 </td> <td> NM_000303 /// XM_005255372 /// XM_005255373 /// XM_005255374 </td> <td> 0006486 // protein glycosylation // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009298 // GDP-mannose biosynthetic process // inferred from electronic annotation /// 0009298 // GDP-mannose biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019307 // mannose biosynthetic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004615 // phosphomannomutase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation </td> <td> 48.15 </td> <td> 97.97 </td> <td> 4.30 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 221736_at </td> <td> 221736_at </td> <td> AA156777 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA156777 /FEA=EST /DB_XREF=gi:1728392 /DB_XREF=est:zl18c08.s1 /CLONE=IMAGE:502286 /UG=Hs.25431 KIAA1219 protein </td> <td> AA156777 </td> <td> Ral GTPase activating protein, beta subunit (non-catalytic) </td> <td> RALGAPB </td> <td> 57148 </td> <td> NM_001282917 /// NM_001282918 /// NM_020336 /// XM_005260462 /// XM_005260463 /// XM_005260464 /// XM_005260465 </td> <td> 0032484 // Ral protein signal transduction // inferred from electronic annotation /// 0032859 // activation of Ral GTPase activity // inferred from sequence or structural similarity /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0060178 // regulation of exocyst localization // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement </td> <td>  </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0017123 // Ral GTPase activator activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity </td> <td> 50.05 </td> <td> 137.00 </td> <td> 4.30 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212256_at </td> <td> 212256_at </td> <td> BE906572 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE906572 /FEA=EST /DB_XREF=gi:10399901 /DB_XREF=est:601502550F1 /CLONE=IMAGE:3904092 /UG=Hs.107260 hypothetical protein DKFZp586H0623 </td> <td> BE906572 </td> <td> polypeptide N-acetylgalactosaminyltransferase 10 </td> <td> GALNT10 </td> <td> 55568 </td> <td> NM_017540 /// NM_024564 /// NM_198321 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0006493 // protein O-linked glycosylation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 104.30 </td> <td> 194.50 </td> <td> 4.30 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 200749_at </td> <td> 200749_at </td> <td> BF112006 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF112006 /FEA=EST /DB_XREF=gi:10941619 /DB_XREF=est:7l37e05.x1 /CLONE=IMAGE:3523665 /UG=Hs.10842 RAN, member RAS oncogene family /FL=gb:BC000852.1 gb:BC004272.1 gb:M31469.1 gb:AF052578.1 gb:AF054183.1 gb:NM_006325.2 </td> <td> BF112006 </td> <td> RAN, member RAS oncogene family </td> <td> RAN </td> <td> 5901 </td> <td> NM_006325 /// XM_005253592 </td> <td> 0000055 // ribosomal large subunit export from nucleus // inferred from mutant phenotype /// 0000056 // ribosomal small subunit export from nucleus // inferred from mutant phenotype /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006259 // DNA metabolic process // traceable author statement /// 0006405 // RNA export from nucleus // non-traceable author statement /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007052 // mitotic spindle organization // traceable author statement /// 0007067 // mitotic nuclear division // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0034629 // cellular protein complex localization // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0000785 // chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005643 // nuclear pore // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // traceable author statement /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050681 // androgen receptor binding // non-traceable author statement </td> <td> 165.10 </td> <td> 357.43 </td> <td> 4.30 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202981_x_at </td> <td> 202981_x_at </td> <td> NM_003031 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003031.1 /DEF=Homo sapiens seven in absentia (Drosophila) homolog 1 (SIAH1), mRNA.  /FEA=mRNA /GEN=SIAH1 /PROD=seven in absentia (Drosophila) homolog 1 /DB_XREF=gi:4506946 /UG=Hs.295923 seven in absentia (Drosophila) homolog 1 /FL=gb:U76247.1 gb:U63295.1 gb:NM_003031.1 </td> <td> NM_003031 </td> <td> siah E3 ubiquitin protein ligase 1 </td> <td> SIAH1 </td> <td> 6477 </td> <td> NM_001006610 /// NM_003031 /// XM_006721246 </td> <td> 0006200 // ATP catabolic process //  /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006515 // misfolded or incompletely synthesized protein catabolic process //  /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from electronic annotation /// 0006625 // protein targeting to peroxisome // inferred from mutant phenotype /// 0006915 // apoptotic process // traceable author statement /// 0007031 // peroxisome organization // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0016485 // protein processing // inferred from mutant phenotype /// 0016558 // protein import into peroxisome matrix // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from direct assay /// 0031648 // protein destabilization // inferred from electronic annotation /// 0031998 // regulation of fatty acid beta-oxidation // inferred from mutant phenotype /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0051402 // neuron apoptotic process // inferred from sequence or structural similarity /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005769 // early endosome // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix //  /// 0005782 // peroxisomal matrix // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030877 // beta-catenin destruction complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from physical interaction /// 0004176 // ATP-dependent peptidase activity //  /// 0004176 // ATP-dependent peptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein transferase activity // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -114.30 </td> <td> 317.80 </td> <td> -4.30 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 214095_at </td> <td> 214095_at </td> <td> AW190316 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW190316 /FEA=EST /DB_XREF=gi:6464796 /DB_XREF=est:xl13g08.x1 /CLONE=IMAGE:2676158 /UG=Hs.2186 eukaryotic translation elongation factor 1 gamma </td> <td> AW190316 </td> <td> serine hydroxymethyltransferase 2 (mitochondrial) </td> <td> SHMT2 </td> <td> 6472 </td> <td> NM_001166356 /// NM_001166357 /// NM_001166358 /// NM_001166359 /// NM_005412 /// NR_029415 /// NR_029416 /// NR_029417 /// NR_048562 </td> <td> 0006544 // glycine metabolic process // inferred from electronic annotation /// 0006545 // glycine biosynthetic process // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from electronic annotation /// 0006564 // L-serine biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0019264 // glycine biosynthetic process from serine // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004372 // glycine hydroxymethyltransferase activity // inferred from direct assay /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008732 // L-allo-threonine aldolase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> -64.55 </td> <td> 78.25 </td> <td> -4.30 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209706_at </td> <td> 209706_at </td> <td> AF247704 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF247704.1 /DEF=Homo sapiens homeobox protein NKX3.1 mRNA, complete cds. /FEA=mRNA /PROD=homeobox protein NKX3.1 /DB_XREF=gi:9963969 /UG=Hs.55999 NK homeobox (Drosophila), family 3, A /FL=gb:AF249670.1 gb:AF249672.1 gb:U80669.1 gb:U91540.1 gb:NM_006167.1 gb:AF247704.1 </td> <td> AF247704 </td> <td> NK3 homeobox 1 </td> <td> NKX3-1 </td> <td> 4824 </td> <td> NM_001256339 /// NM_006167 /// NR_046072 </td> <td> 0001655 // urogenital system development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007275 // multicellular organismal development // traceable author statement /// 0007431 // salivary gland development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008584 // male gonad development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0010942 // positive regulation of cell death // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0030850 // prostate gland development // inferred from electronic annotation /// 0033574 // response to testosterone // inferred from sequence or structural similarity /// 0035690 // cellular response to drug // inferred from expression pattern /// 0035907 // dorsal aorta development // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043401 // steroid hormone mediated signaling pathway // inferred from direct assay /// 0043491 // protein kinase B signaling // inferred from mutant phenotype /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048754 // branching morphogenesis of an epithelial tube // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0051781 // positive regulation of cell division // inferred from mutant phenotype /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060442 // branching involved in prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060770 // negative regulation of epithelial cell proliferation involved in prostate gland development // inferred from sequence or structural similarity /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0071383 // cellular response to steroid hormone stimulus // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071850 // mitotic cell cycle arrest // inferred from direct assay /// 0071899 // negative regulation of estrogen receptor binding // inferred from direct assay /// 2000836 // positive regulation of androgen secretion // inferred from direct assay /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from direct assay /// 2001235 // positive regulation of apoptotic signaling pathway // inferred from direct assay /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement </td> <td> 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000983 // RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0001047 // core promoter binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004882 // androgen receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from direct assay /// 0030284 // estrogen receptor activity // inferred from direct assay /// 0030295 // protein kinase activator activity // inferred from direct assay /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043621 // protein self-association // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0097162 // MADS box domain binding // inferred from electronic annotation </td> <td> -42.25 </td> <td> 54.68 </td> <td> -4.29 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203883_s_at </td> <td> 203883_s_at </td> <td> BG249608 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG249608 /FEA=EST /DB_XREF=gi:12759411 /DB_XREF=est:602319671F1 /CLONE=IMAGE:4415033 /UG=Hs.173656 KIAA0941 protein /FL=gb:AB023158.1 gb:NM_014904.1 </td> <td> BG249608 </td> <td> RAB11 family interacting protein 2 (class I) </td> <td> RAB11FIP2 </td> <td> 22841 </td> <td> NM_014904 /// XM_005269629 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from mutant phenotype /// 0035773 // insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0045055 // regulated secretory pathway // inferred from sequence or structural similarity /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> 40.85 </td> <td> 67.22 </td> <td> 4.29 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212179_at </td> <td> 212179_at </td> <td> AW157501 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW157501 /FEA=EST /DB_XREF=gi:6228902 /DB_XREF=est:au83a02.x1 /CLONE=IMAGE:2782826 /UG=Hs.18368 DKFZP564B0769 protein </td> <td> AW157501 </td> <td> PNN-interacting serine/arginine-rich protein </td> <td> PNISR </td> <td> 25957 </td> <td> NM_015491 /// NM_032870 /// XM_005266912 /// XM_005266913 /// XM_005266914 /// XM_005266915 /// XM_005266916 /// XM_005266917 /// XM_006715450 /// XM_006715451 /// XM_006715452 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 37.10 </td> <td> 35.58 </td> <td> 4.29 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 206075_s_at </td> <td> 206075_s_at </td> <td> NM_001895 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001895.1 /DEF=Homo sapiens casein kinase 2, alpha 1 polypeptide (CSNK2A1), mRNA. /FEA=mRNA /GEN=CSNK2A1 /PROD=casein kinase 2, alpha 1 polypeptide /DB_XREF=gi:4503094 /UG=Hs.155140 casein kinase 2, alpha 1 polypeptide /FL=gb:M55265.1 gb:NM_001895.1 gb:J02853.1 </td> <td> NM_001895 </td> <td> casein kinase 2, alpha 1 polypeptide </td> <td> CSNK2A1 </td> <td> 1457 </td> <td> NM_001895 /// NM_177559 /// NM_177560 /// XM_006723548 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0001558 // regulation of cell growth // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from mutant phenotype /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0042127 // regulation of cell proliferation // non-traceable author statement /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // traceable author statement /// 0071174 // mitotic spindle checkpoint // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005956 // protein kinase CK2 complex // traceable author statement /// 0016580 // Sin3 complex // inferred from direct assay /// 0016581 // NuRD complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019888 // protein phosphatase regulator activity // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051879 // Hsp90 protein binding // traceable author statement </td> <td> -73.23 </td> <td> 180.91 </td> <td> -4.29 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218890_x_at </td> <td> 218890_x_at </td> <td> NM_016622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016622.1 /DEF=Homo sapiens hypothetical protein (LOC51318), mRNA. /FEA=mRNA /GEN=LOC51318 /PROD=hypothetical protein /DB_XREF=gi:7706161 /UG=Hs.93814 hypothetical protein /FL=gb:AF208849.1 gb:NM_016622.1 </td> <td> NM_016622 </td> <td> mitochondrial ribosomal protein L35 </td> <td> MRPL35 </td> <td> 51318 </td> <td> NM_016622 /// NM_145644 /// XM_005264361 </td> <td> 0006412 // translation // non-traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement </td> <td> 45.70 </td> <td> 99.20 </td> <td> 4.29 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 216336_x_at </td> <td> 216336_x_at </td> <td> AL031602 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL031602 /DEF=Human DNA sequence from clone RP5-1174N9 on chromosome 1p34.1-35.3. Contains the gene for a novel protein with IBR domain, a (pseudo?) gene for a novel protein similar to MT1E (metallothionein 1E (functional)), ESTs, STSs, GSSs and two putative Cp... /FEA=mRNA_1 /DB_XREF=gi:6729581 /UG=Hs.283842 Human DNA sequence from clone RP5-1174N9 on chromosome 1p34.1-35.3. Contains the gene for a novel protein with IBR domain, a (pseudo?) gene for a novel protein similar to MT1E (metallothionein 1E (functional)), ESTs, STSs, GSSs and two putative CpG island </td> <td> AL031602 </td> <td> metallothionein 1E </td> <td> MT1E </td> <td> 4493 </td> <td> NM_175617 /// XM_005255956 </td> <td> 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0071276 // cellular response to cadmium ion // inferred from expression pattern /// 0071294 // cellular response to zinc ion // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -816.95 </td> <td> 1461.97 </td> <td> -4.29 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 221904_at </td> <td> 221904_at </td> <td> AI141670 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI141670 /FEA=EST /DB_XREF=gi:3649127 /DB_XREF=est:ot08b12.x1 /CLONE=IMAGE:1614239 /UG=Hs.141660 chloride channel 2 </td> <td> AI141670 </td> <td> family with sequence similarity 131, member A </td> <td> FAM131A </td> <td> 131408 </td> <td> NM_001171093 /// NM_144635 /// XM_005247113 /// XM_005247114 /// XM_005247115 </td> <td>  </td> <td> 0005576 // extracellular region // inferred from electronic annotation </td> <td>  </td> <td> 57.65 </td> <td> 98.42 </td> <td> 4.29 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 210396_s_at </td> <td> 210396_s_at </td> <td> AF271775 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF271775.1 /DEF=Homo sapiens DC49 mRNA, complete cds. /FEA=mRNA /PROD=DC49 /DB_XREF=gi:12006206 /UG=Hs.307093 Homo sapiens DC49 mRNA, complete cds /FL=gb:AF271775.1 </td> <td> AF271775 </td> <td> bolA family member 2 /// SMG1 pseudogene 2 /// SMG1 pseudogene 5 </td> <td> BOLA2 /// SMG1P2 /// SMG1P5 </td> <td> 440354 /// 552900 /// 595101 </td> <td> NM_001031827 /// NM_001031833 /// NR_002453 /// NR_002473 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // non-traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006950 // response to stress // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046854 // phosphatidylinositol phosphorylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity //  /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -51.67 </td> <td> 212.96 </td> <td> -4.29 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201017_at </td> <td> 201017_at </td> <td> BG149698 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG149698 /FEA=EST /DB_XREF=gi:12661728 /DB_XREF=est:nad32e01.x1 /CLONE=IMAGE:3367368 /UG=Hs.4310 eukaryotic translation initiation factor 1A /FL=gb:BC000793.1 gb:L18960.1 gb:NM_001412.1 </td> <td> BG149698 </td> <td> eukaryotic translation initiation factor 1A, X-linked </td> <td> EIF1AX </td> <td> 1964 </td> <td> NM_001412 </td> <td> 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 77.90 </td> <td> 147.75 </td> <td> 4.29 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217851_s_at </td> <td> 217851_s_at </td> <td> NM_016045 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016045.1 /DEF=Homo sapiens CGI-107 protein (LOC51012), mRNA. /FEA=mRNA /GEN=LOC51012 /PROD=CGI-107 protein /DB_XREF=gi:7705609 /UG=Hs.3945 CGI-107 protein /FL=gb:AF151865.1 gb:NM_016045.1 </td> <td> NM_016045 </td> <td> slowmo homolog 2 (Drosophila) </td> <td> SLMO2 </td> <td> 51012 </td> <td> NM_001256403 /// NM_016045 </td> <td> 0015914 // phospholipid transport // not recorded </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // not recorded </td> <td> 1990050 // phosphatidic acid transporter activity // not recorded </td> <td> 38.95 </td> <td> 57.23 </td> <td> 4.29 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212010_s_at </td> <td> 212010_s_at </td> <td> AK025647 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK025647.1 /DEF=Homo sapiens cDNA: FLJ21994 fis, clone HEP06577, highly similar to AF103803 Homo sapiens clone H41 unknown mRNA.  /FEA=mRNA /DB_XREF=gi:10438231 /UG=Hs.283690 hypothetical protein /FL=gb:NM_017548.1 </td> <td> AK025647 </td> <td> CDV3 homolog (mouse) </td> <td> CDV3 </td> <td> 55573 </td> <td> NM_001134422 /// NM_001134423 /// NM_001282762 /// NM_001282763 /// NM_001282764 /// NM_001282765 /// NM_017548 /// XM_005247588 /// XM_005247589 /// XM_005247590 /// XM_005247591 /// XM_005247592 /// XM_005247594 </td> <td> 0008283 // cell proliferation // non-traceable author statement </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td>  </td> <td> -287.08 </td> <td> 697.99 </td> <td> -4.28 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 222129_at </td> <td> 222129_at </td> <td> AK026155 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026155.1 /DEF=Homo sapiens cDNA: FLJ22502 fis, clone HRC11383. /FEA=mRNA /DB_XREF=gi:10438915 /UG=Hs.298140 Homo sapiens cDNA: FLJ22502 fis, clone HRC11383 </td> <td> AK026155 </td> <td> family with sequence similarity 134, member A </td> <td> FAM134A </td> <td> 79137 </td> <td> NM_024293 /// XM_005246848 /// XM_005246849 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 39.80 </td> <td> 73.78 </td> <td> 4.28 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201447_at </td> <td> 201447_at </td> <td> H96549 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:H96549 /FEA=EST /DB_XREF=gi:1110035 /DB_XREF=est:yw01c09.s1 /CLONE=IMAGE:250960 /UG=Hs.239489 TIA1 cytotoxic granule-associated RNA-binding protein /FL=gb:NM_022037.1 gb:M77142.1 </td> <td> H96549 </td> <td> TIA1 cytotoxic granule-associated RNA binding protein </td> <td> TIA1 </td> <td> 7072 </td> <td> NM_022037 /// NM_022173 /// XM_005264524 /// XM_005264525 /// XM_005264526 /// XM_005264527 /// XM_005264528 /// XM_005264530 /// XM_005264531 /// XM_005264532 /// XM_005264533 /// XR_244953 /// XR_244954 /// XR_244955 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0042036 // negative regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0048024 // regulation of mRNA splicing, via spliceosome // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0097165 // nuclear stress granule // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 41.40 </td> <td> 64.00 </td> <td> 4.28 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209721_s_at </td> <td> 209721_s_at </td> <td> BC002857 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002857.1 /DEF=Homo sapiens, clone MGC:3442, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:3442) /DB_XREF=gi:12804008 /UG=Hs.46659 DKFZP586I2223 protein /FL=gb:BC002857.1 gb:BC001790.1 gb:NM_015438.1 gb:BC004384.1 </td> <td> BC002857 </td> <td> intermediate filament family orphan 1 </td> <td> IFFO1 </td> <td> 25900 </td> <td> NM_001039670 /// NM_001193457 /// NM_001193459 /// NM_015438 /// NM_080730 /// NM_080731 /// NR_036467 /// XM_006718973 /// XM_006718974 /// XM_006718975 /// XM_006718976 /// XM_006718977 /// XM_006718978 /// XM_006718979 /// XM_006718980 /// XM_006718981 /// XM_006718982 </td> <td>  </td> <td> 0005882 // intermediate filament // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation </td> <td> 52.08 </td> <td> 70.76 </td> <td> 4.28 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209108_at </td> <td> 209108_at </td> <td> AF053453 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF053453.1 /DEF=Homo sapiens tetraspan TM4SF (TSPAN-6) mRNA, complete cds. /FEA=mRNA /GEN=TSPAN-6 /PROD=tetraspan TM4SF /DB_XREF=gi:2995860 /UG=Hs.121068 transmembrane 4 superfamily member 6 /FL=gb:AF043906.1 gb:AF053453.1 gb:U84895.1 gb:NM_003270.1 gb:AF133426.1 </td> <td> AF053453 </td> <td> tetraspanin 6 </td> <td> TSPAN6 </td> <td> 7105 </td> <td> NM_001278740 /// NM_001278741 /// NM_001278742 /// NM_001278743 /// NM_003270 </td> <td> 0007165 // signal transduction // inferred from mutant phenotype /// 0039532 // negative regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 1901223 // negative regulation of NIK/NF-kappaB signaling // inferred from direct assay </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction </td> <td> 55.10 </td> <td> 229.47 </td> <td> 4.28 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201257_x_at </td> <td> 201257_x_at </td> <td> NM_001006 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001006.1 /DEF=Homo sapiens ribosomal protein S3A (RPS3A), mRNA. /FEA=mRNA /GEN=RPS3A /PROD=ribosomal protein S3A /DB_XREF=gi:4506722 /UG=Hs.77039 ribosomal protein S3A /FL=gb:BC000204.1 gb:BC001708.1 gb:BC004981.1 gb:M84711.1 gb:M77234.1 gb:L13802.1 gb:NM_001006.1 </td> <td> NM_001006 </td> <td> ribosomal protein S3A /// small nucleolar RNA, C/D box 73A </td> <td> RPS3A /// SNORD73A </td> <td> 6189 /// 8944 </td> <td> NM_001006 /// NM_001267699 /// NR_000007 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0002181 // cytoplasmic translation // not recorded /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from mutant phenotype /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0097194 // execution phase of apoptosis // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -753.17 </td> <td> 4556.94 </td> <td> -4.28 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 219083_at </td> <td> 219083_at </td> <td> NM_018130 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018130.1 /DEF=Homo sapiens hypothetical protein FLJ10539 (FLJ10539), mRNA. /FEA=mRNA /GEN=FLJ10539 /PROD=hypothetical protein FLJ10539 /DB_XREF=gi:8922499 /UG=Hs.93391 hypothetical protein FLJ10539 /FL=gb:NM_018130.1 </td> <td> NM_018130 </td> <td> SHQ1, H/ACA ribonucleoprotein assembly factor </td> <td> SHQ1 </td> <td> 55164 </td> <td> NM_018130 </td> <td> 0022618 // ribonucleoprotein complex assembly // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 2000233 // negative regulation of rRNA processing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 55.85 </td> <td> 123.35 </td> <td> 4.28 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 210211_s_at </td> <td> 210211_s_at </td> <td> AF028832 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF028832.1 /DEF=Homo sapiens Hsp89-alpha-delta-N mRNA, complete cds. /FEA=mRNA /PROD=Hsp89-alpha-delta-N /DB_XREF=gi:3287488 /UG=Hs.289088 heat shock 90kD protein 1, alpha /FL=gb:AF028832.1 </td> <td> AF028832 </td> <td> heat shock protein 90kDa alpha (cytosolic), class A member 1 </td> <td> HSP90AA1 </td> <td> 3320 </td> <td> NM_001017963 /// NM_005348 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0003009 // skeletal muscle contraction // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0006839 // mitochondrial transport // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009651 // response to salt stress // inferred from electronic annotation /// 0010592 // positive regulation of lamellipodium assembly // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0042026 // protein refolding // traceable author statement /// 0043627 // response to estrogen // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045040 // protein import into mitochondrial outer membrane // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045793 // positive regulation of cell size // inferred from electronic annotation /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051131 // chaperone-mediated protein complex assembly // inferred from direct assay /// 0060452 // positive regulation of cardiac muscle contraction // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0000166 // nucleotide binding // traceable author statement /// 0002134 // UTP binding // inferred from electronic annotation /// 0002135 // CTP binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017098 // sulfonylurea receptor binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0023026 // MHC class II protein complex binding // inferred from direct assay /// 0030235 // nitric-oxide synthase regulator activity // inferred from direct assay /// 0030911 // TPR domain binding // inferred from direct assay /// 0030911 // TPR domain binding // traceable author statement /// 0032564 // dATP binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // traceable author statement /// 0044325 // ion channel binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 189.65 </td> <td> 1304.65 </td> <td> 4.27 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 220651_s_at </td> <td> 220651_s_at </td> <td> NM_018518 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018518.1 /DEF=Homo sapiens homolog of yeast MCM10; hypothetical protein PRO2249 (PRO2249), mRNA.  /FEA=mRNA /GEN=PRO2249 /PROD=homolog of yeast MCM10; hypothetical proteinPRO2249 /DB_XREF=gi:8924142 /UG=Hs.198363 homolog of yeast MCM10; hypothetical protein PRO2249 /FL=gb:AB042719.1 gb:BC004876.1 gb:AF119869.1 gb:NM_018518.1 </td> <td> NM_018518 </td> <td> minichromosome maintenance complex component 10 </td> <td> MCM10 </td> <td> 55388 </td> <td> NM_018518 /// NM_182751 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 39.55 </td> <td> 48.25 </td> <td> 4.27 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 220471_s_at </td> <td> 220471_s_at </td> <td> NM_025107 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025107.1 /DEF=Homo sapiens hypothetical protein FLJ21269 (FLJ21269), mRNA. /FEA=mRNA /GEN=FLJ21269 /PROD=hypothetical protein FLJ21269 /DB_XREF=gi:13376676 /UG=Hs.288669 hypothetical protein FLJ21269 /FL=gb:NM_025107.1 </td> <td> NM_025107 </td> <td> myc target 1 </td> <td> MYCT1 </td> <td> 80177 </td> <td> NM_025107 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td>  </td> <td> -81.50 </td> <td> 137.75 </td> <td> -4.27 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202930_s_at </td> <td> 202930_s_at </td> <td> NM_003850 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003850.1 /DEF=Homo sapiens succinate-CoA ligase, ADP-forming, beta subunit (SUCLA2), mRNA.  /FEA=mRNA /GEN=SUCLA2 /PROD=succinate-CoA ligase, ADP-forming, beta subunit /DB_XREF=gi:11321582 /UG=Hs.182217 succinate-CoA ligase, ADP-forming, beta subunit /FL=gb:NM_003850.1 gb:AB035863.1 </td> <td> NM_003850 </td> <td> succinate-CoA ligase, ADP-forming, beta subunit </td> <td> SUCLA2 </td> <td> 8803 </td> <td> NM_003850 </td> <td> 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006104 // succinyl-CoA metabolic process // traceable author statement /// 0006105 // succinate metabolic process // inferred from electronic annotation /// 0006781 // succinyl-CoA pathway // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004775 // succinate-CoA ligase (ADP-forming) activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 57.73 </td> <td> 102.84 </td> <td> 4.27 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202684_s_at </td> <td> 202684_s_at </td> <td> AB020966 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB020966.1 /DEF=Homo sapiens hMet mRNA for RNA (guanine-N7-) methyltransferase, complete cds.  /FEA=mRNA /GEN=hMet /PROD=RNA (guanine-N7-) methyltransferase /DB_XREF=gi:5478274 /UG=Hs.8086 RNA (guanine-7-) methyltransferase /FL=gb:AB007858.1 gb:AF067791.1 gb:AB022604.1 gb:NM_003799.1 gb:AB020966.1 </td> <td> AB020966 </td> <td> RNA (guanine-7-) methyltransferase </td> <td> RNMT </td> <td> 8731 </td> <td> NM_003799 /// XM_005258160 /// XM_005258162 /// XM_006722361 </td> <td> 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // inferred from mutant phenotype /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0036265 // RNA (guanine-N7)-methylation // inferred from direct assay /// 0036265 // RNA (guanine-N7)-methylation // inferred from electronic annotation /// 0036265 // RNA (guanine-N7)-methylation // inferred from mutant phenotype /// 0036265 // RNA (guanine-N7)-methylation // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005845 // mRNA cap binding complex // inferred from direct assay /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from mutant phenotype /// 0004482 // mRNA (guanine-N7-)-methyltransferase activity // inferred from direct assay /// 0004482 // mRNA (guanine-N7-)-methyltransferase activity // inferred from mutant phenotype /// 0004482 // mRNA (guanine-N7-)-methyltransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -42.10 </td> <td> 36.02 </td> <td> -4.27 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201294_s_at </td> <td> 201294_s_at </td> <td> N24643 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N24643 /FEA=EST /DB_XREF=gi:1138793 /DB_XREF=est:yx89f11.s1 /CLONE=IMAGE:268941 /UG=Hs.187991 DKFZP564A122 protein /FL=gb:AF106684.1 gb:NM_015626.1 </td> <td> N24643 </td> <td> WD repeat and SOCS box containing 1 </td> <td> WSB1 </td> <td> 26118 </td> <td> NM_015626 /// NM_134264 /// NM_134265 /// XM_005257963 /// XR_243778 /// XR_429881 </td> <td> 0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation </td> <td> -73.00 </td> <td> 104.97 </td> <td> -4.26 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 213122_at </td> <td> 213122_at </td> <td> AI096375 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI096375 /FEA=EST /DB_XREF=gi:3446286 /DB_XREF=est:qb91e08.x1 /CLONE=IMAGE:1707494 /UG=Hs.173094 Homo sapiens mRNA for KIAA1750 protein, partial cds </td> <td> AI096375 </td> <td> TSPY-like 5 </td> <td> TSPYL5 </td> <td> 85453 </td> <td> NM_033512 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from mutant phenotype /// 0071480 // cellular response to gamma radiation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 37.45 </td> <td> 71.78 </td> <td> 4.26 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203707_at </td> <td> 203707_at </td> <td> NM_005741 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005741.1 /DEF=Homo sapiens zinc finger protein 263 (ZNF263), mRNA. /FEA=mRNA /GEN=ZNF263 /PROD=zinc finger protein 263 /DB_XREF=gi:5032240 /UG=Hs.182528 zinc finger protein 263 /FL=gb:D88827.1 gb:NM_005741.1 </td> <td> NM_005741 </td> <td> long intergenic non-protein coding RNA 921 /// zinc finger protein 263 </td> <td> LINC00921 /// ZNF263 </td> <td> 10127 /// 283876 </td> <td> NM_005741 /// NR_033904 /// XM_005255031 /// XM_006720831 /// XM_006720832 /// XM_006720833 /// XM_006720834 /// XM_006720835 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 40.70 </td> <td> 82.40 </td> <td> 4.26 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 210105_s_at </td> <td> 210105_s_at </td> <td> M14333 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M14333.1 /DEF=Homo sapiens c-syn protooncogene mRNA, complete cds. /FEA=mRNA /DB_XREF=gi:181171 /UG=Hs.169370 FYN oncogene related to SRC, FGR, YES /FL=gb:M14333.1 gb:M14676.1 gb:NM_002037.1 </td> <td> M14333 </td> <td> FYN proto-oncogene, Src family tyrosine kinase </td> <td> FYN </td> <td> 2534 </td> <td> NM_001242779 /// NM_002037 /// NM_153047 /// NM_153048 /// XM_005266887 /// XM_005266888 /// XM_005266889 /// XM_005266890 /// XM_005266892 /// XM_006715429 </td> <td> 0001764 // neuron migration // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006816 // calcium ion transport // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007612 // learning // traceable author statement /// 0007631 // feeding behavior // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030900 // forebrain development // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0050798 // activated T cell proliferation // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0050966 // detection of mechanical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 1900182 // positive regulation of protein localization to nucleus // inferred from electronic annotation /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from physical interaction /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // non-traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042608 // T cell receptor binding // inferred from electronic annotation /// 0042609 // CD4 receptor binding // inferred from electronic annotation /// 0042610 // CD8 receptor binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0051428 // peptide hormone receptor binding // inferred from electronic annotation /// 0070851 // growth factor receptor binding // inferred from physical interaction </td> <td> -117.95 </td> <td> 525.43 </td> <td> -4.26 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201440_at </td> <td> 201440_at </td> <td> NM_004818 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004818.1 /DEF=Homo sapiens prp28, U5 snRNP 100 kd protein (U5-100K), mRNA. /FEA=mRNA /GEN=U5-100K /PROD=prp28, U5 snRNP 100 kd protein /DB_XREF=gi:4759277 /UG=Hs.168103 prp28, U5 snRNP 100 kd protein /FL=gb:BC002366.1 gb:AF026402.1 gb:NM_004818.1 </td> <td> NM_004818 </td> <td> DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 </td> <td> DDX23 </td> <td> 9416 </td> <td> NM_004818 /// XM_006719699 </td> <td> 0000354 // cis assembly of pre-catalytic spliceosome // inferred by curator /// 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006200 // ATP catabolic process // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005682 // U5 snRNP // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 74.90 </td> <td> 73.75 </td> <td> 4.26 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209225_x_at </td> <td> 209225_x_at </td> <td> AI653355 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI653355 /FEA=EST /DB_XREF=gi:4737334 /DB_XREF=est:wb45b07.x1 /CLONE=IMAGE:2308597 /UG=Hs.168075 karyopherin (importin) beta 2 /FL=gb:U72069.1 gb:U72395.1 </td> <td> AI653355 </td> <td> transportin 1 </td> <td> TNPO1 </td> <td> 3842 </td> <td> NM_002270 /// NM_153188 /// XM_005248500 /// XM_005248501 </td> <td> 0000060 // protein import into nucleus, translocation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -417.93 </td> <td> 1025.59 </td> <td> -4.26 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 210453_x_at </td> <td> 210453_x_at </td> <td> AL050277 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL050277.1 /DEF=Homo sapiens mRNA; cDNA DKFZp566G013 (from clone DKFZp566G013); complete cds.  /FEA=mRNA /GEN=DKFZp566G013 /PROD=hypothetical protein /DB_XREF=gi:4886454 /UG=Hs.107476 ATP synthase, H+ transporting, mitochondrial F1F0, subunit g /FL=gb:AL050277.1 </td> <td> AL050277 </td> <td> ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G </td> <td> ATP5L </td> <td> 10632 </td> <td> NM_006476 /// NR_033759 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator </td> <td> 136.25 </td> <td> 1219.15 </td> <td> 4.26 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 205168_at </td> <td> 205168_at </td> <td> NM_006182 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006182.1 /DEF=Homo sapiens discoidin domain receptor family, member 2 (DDR2), mRNA.  /FEA=mRNA /GEN=DDR2 /PROD=discoidin domain receptor family, member 2precursor /DB_XREF=gi:5453813 /UG=Hs.71891 discoidin domain receptor family, member 2 /FL=gb:NM_006182.1 </td> <td> NM_006182 </td> <td> discoidin domain receptor tyrosine kinase 2 </td> <td> DDR2 </td> <td> 4921 </td> <td> NM_001014796 /// NM_006182 /// XM_005245221 /// XM_006711344 /// XM_006711345 </td> <td> 0001503 // ossification // inferred from electronic annotation /// 0003416 // endochondral bone growth // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010715 // regulation of extracellular matrix disassembly // traceable author statement /// 0010763 // positive regulation of fibroblast migration // inferred from sequence or structural similarity /// 0010763 // positive regulation of fibroblast migration // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030198 // extracellular matrix organization // traceable author statement /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030500 // regulation of bone mineralization // inferred from mutant phenotype /// 0031214 // biomineral tissue development // inferred from sequence or structural similarity /// 0035988 // chondrocyte proliferation // inferred from sequence or structural similarity /// 0035988 // chondrocyte proliferation // traceable author statement /// 0038063 // collagen-activated tyrosine kinase receptor signaling pathway // inferred from direct assay /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from sequence or structural similarity /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0090091 // positive regulation of extracellular matrix disassembly // inferred from sequence or structural similarity </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0038062 // protein tyrosine kinase collagen receptor activity // inferred from direct assay </td> <td> -45.62 </td> <td> 56.91 </td> <td> -4.26 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201649_at </td> <td> 201649_at </td> <td> NM_004223 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004223.1 /DEF=Homo sapiens ubiquitin-conjugating enzyme E2L 6 (UBE2L6), mRNA. /FEA=mRNA /GEN=UBE2L6 /PROD=ubiquitin-conjugating enzyme E2L 6 /DB_XREF=gi:4759281 /UG=Hs.169895 ubiquitin-conjugating enzyme E2L 6 /FL=gb:AF031141.1 gb:AF061736.1 gb:NM_004223.1 </td> <td> NM_004223 </td> <td> ubiquitin-conjugating enzyme E2L 6 </td> <td> UBE2L6 </td> <td> 9246 </td> <td> NM_004223 /// NM_198183 </td> <td> 0006464 // cellular protein modification process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019941 // modification-dependent protein catabolic process // inferred from electronic annotation /// 0032020 // ISG15-protein conjugation // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019787 // small conjugating protein ligase activity // inferred from electronic annotation /// 0042296 // ISG15 ligase activity // inferred from electronic annotation </td> <td> -49.45 </td> <td> 125.40 </td> <td> -4.26 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 34868_at </td> <td> 34868_at </td> <td> AB029012 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AB029012:Homo sapiens mRNA for KIAA1089 protein, partial cds /cds=(0,2967) /gb=AB029012 /gi=5689514 /ug=Hs.4990 /len=4329 </td> <td> AB029012 </td> <td> SMG5 nonsense mediated mRNA decay factor </td> <td> SMG5 </td> <td> 23381 </td> <td> NM_015327 /// XM_005245049 /// XM_006711248 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0035303 // regulation of dephosphorylation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from direct assay </td> <td> 32.52 </td> <td> 73.41 </td> <td> 4.25 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 208789_at </td> <td> 208789_at </td> <td> BC004295 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BC004295.1 /DEF=Homo sapiens, clone IMAGE:3622356, mRNA, partial cds. /FEA=mRNA /PROD=Unknown (protein for IMAGE:3622356) /DB_XREF=gi:13279151 /UG=Hs.29759 RNA POLYMERASE I AND TRANSCRIPT RELEASE FACTOR /FL=gb:AF312393.1 </td> <td> BC004295 </td> <td> polymerase I and transcript release factor </td> <td> PTRF </td> <td> 284119 </td> <td> NM_012232 /// XM_005257242 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006353 // DNA-templated transcription, termination // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // inferred from direct assay /// 0006363 // termination of RNA polymerase I transcription // inferred from direct assay /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005901 // caveola // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding // inferred from electronic annotation /// 0042134 // rRNA primary transcript binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 364.45 </td> <td> 1119.58 </td> <td> 4.25 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212830_at </td> <td> 212830_at </td> <td> W68084 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W68084 /FEA=EST /DB_XREF=gi:1376954 /DB_XREF=est:zd42f12.s1 /CLONE=IMAGE:343343 /UG=Hs.5599 EGF-like-domain, multiple 5 </td> <td> W68084 </td> <td> multiple EGF-like-domains 9 </td> <td> MEGF9 </td> <td> 1955 </td> <td> NM_001080497 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 63.28 </td> <td> 132.16 </td> <td> 4.25 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 200987_x_at </td> <td> 200987_x_at </td> <td> AA758755 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA758755 /FEA=EST /DB_XREF=gi:2806618 /DB_XREF=est:ah80c08.s1 /CLONE=1321934 /UG=Hs.152978 proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) /FL=gb:NM_005789.1 gb:U11292.1 </td> <td> AA758755 </td> <td> proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) </td> <td> PSME3 </td> <td> 10197 </td> <td> NM_001267045 /// NM_005789 /// NM_176863 /// NR_049772 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010950 // positive regulation of endopeptidase activity // inferred from direct assay /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0061136 // regulation of proteasomal protein catabolic process // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008537 // proteasome activator complex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0002039 // p53 binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0061133 // endopeptidase activator activity // inferred from direct assay /// 0097371 // MDM2/MDM4 family protein binding // inferred from direct assay </td> <td> 57.25 </td> <td> 292.48 </td> <td> 4.25 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202698_x_at </td> <td> 202698_x_at </td> <td> NM_001861 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001861.1 /DEF=Homo sapiens cytochrome c oxidase subunit IV (COX4), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=COX4 /PROD=cytochrome c oxidase subunit IV /DB_XREF=gi:4502980 /UG=Hs.113205 cytochrome c oxidase subunit IV /FL=gb:M21575.1 gb:M34600.1 gb:U90915.1 gb:NM_001861.1 </td> <td> NM_001861 </td> <td> cytochrome c oxidase subunit IV isoform 1 </td> <td> COX4I1 </td> <td> 1327 </td> <td> NM_001861 /// XM_005255798 </td> <td> 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0007584 // response to nutrient // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -362.88 </td> <td> 1499.56 </td> <td> -4.25 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 205633_s_at </td> <td> 205633_s_at </td> <td> NM_000688 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000688.1 /DEF=Homo sapiens aminolevulinate, delta-, synthase 1 (ALAS1), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=ALAS1 /PROD=aminolevulinate, delta-, synthase 1 /DB_XREF=gi:4502024 /UG=Hs.78712 aminolevulinate, delta-, synthase 1 /FL=gb:NM_000688.1 </td> <td> NM_000688 </td> <td> aminolevulinate, delta-, synthase 1 </td> <td> ALAS1 </td> <td> 211 </td> <td> NM_000688 /// NM_199166 /// XM_005264944 /// XM_005264945 </td> <td> 0006778 // porphyrin-containing compound metabolic process // traceable author statement /// 0006782 // protoporphyrinogen IX biosynthetic process // inferred from electronic annotation /// 0006783 // heme biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0033014 // tetrapyrrole biosynthetic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0003870 // 5-aminolevulinate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation </td> <td> 50.65 </td> <td> 117.67 </td> <td> 4.25 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 205140_at </td> <td> 205140_at </td> <td> NM_003838 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003838.1 /DEF=Homo sapiens fucose-1-phosphate guanylyltransferase (FPGT), mRNA. /FEA=mRNA /GEN=FPGT /PROD=fucose-1-phosphate guanyltransferase /DB_XREF=gi:4503776 /UG=Hs.150926 fucose-1-phosphate guanylyltransferase /FL=gb:AF017445.1 gb:NM_003838.1 </td> <td> NM_003838 </td> <td> fucose-1-phosphate guanylyltransferase </td> <td> FPGT </td> <td> 8790 </td> <td> NM_001199328 /// NM_001199329 /// NM_003838 </td> <td> 0006004 // fucose metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // traceable author statement /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0031013 // troponin I binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047341 // fucose-1-phosphate guanylyltransferase activity // inferred from electronic annotation </td> <td> 39.07 </td> <td> 41.49 </td> <td> 4.25 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204123_at </td> <td> 204123_at </td> <td> NM_013975 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013975.1 /DEF=Homo sapiens ligase III, DNA, ATP-dependent (LIG3), transcript variant alpha, mRNA.  /FEA=mRNA /GEN=LIG3 /PROD=ligase III, DNA, ATP-dependent, isoform alpha /DB_XREF=gi:7710125 /UG=Hs.100299 ligase III, DNA, ATP-dependent /FL=gb:NM_013975.1 </td> <td> NM_013975 </td> <td> ligase III, DNA, ATP-dependent </td> <td> LIG3 </td> <td> 3980 </td> <td> NM_002311 /// NM_013975 /// XM_005257970 /// XM_005257971 /// XM_006721896 </td> <td> 0006260 // DNA replication // inferred from electronic annotation /// 0006273 // lagging strand elongation // not recorded /// 0006281 // DNA repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006288 // base-excision repair, DNA ligation // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // not recorded /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0033151 // V(D)J recombination // inferred from direct assay /// 0043504 // mitochondrial DNA repair // inferred from electronic annotation /// 0045910 // negative regulation of DNA recombination // inferred from electronic annotation /// 0051103 // DNA ligation involved in DNA repair // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0000795 // synaptonemal complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // not recorded /// 0005739 // mitochondrion // not recorded </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003909 // DNA ligase activity // inferred from direct assay /// 0003910 // DNA ligase (ATP) activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 38.50 </td> <td> 33.15 </td> <td> 4.24 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212470_at </td> <td> 212470_at </td> <td> AB011088 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB011088.1 /DEF=Homo sapiens mRNA for KIAA0516 protein, partial cds. /FEA=mRNA /GEN=KIAA0516 /PROD=KIAA0516 protein /DB_XREF=gi:3043555 /UG=Hs.129872 sperm associated antigen 9 </td> <td> AB011088 </td> <td> sperm associated antigen 9 </td> <td> SPAG9 </td> <td> 9043 </td> <td> NM_001130527 /// NM_001130528 /// NM_001251971 /// NM_003971 /// NM_172345 /// XM_005257767 /// XM_005257768 /// XM_005257769 /// XM_005257770 /// XM_005257771 /// XM_005257772 /// XM_005257773 /// XM_005257774 /// XM_006722163 </td> <td> 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0042692 // muscle cell differentiation // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0090074 // negative regulation of protein homodimerization activity // inferred from electronic annotation </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016021 // integral component of membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008432 // JUN kinase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from electronic annotation /// 0048273 // mitogen-activated protein kinase p38 binding // inferred from electronic annotation </td> <td> -116.73 </td> <td> 260.34 </td> <td> -4.24 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218139_s_at </td> <td> 218139_s_at </td> <td> NM_018229 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018229.1 /DEF=Homo sapiens hypothetical protein FLJ10813 (FLJ10813), mRNA. /FEA=mRNA /GEN=FLJ10813 /PROD=hypothetical protein FLJ10813 /DB_XREF=gi:8922687 /UG=Hs.106210 hypothetical protein FLJ10813 /FL=gb:AL136685.1 gb:NM_018229.1 </td> <td> NM_018229 </td> <td> adaptor-related protein complex 5, mu 1 subunit </td> <td> AP5M1 </td> <td> 55745 </td> <td> NM_018229 /// NR_026895 /// XM_006720196 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030119 // AP-type membrane coat adaptor complex // inferred from direct assay /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 42.80 </td> <td> 103.28 </td> <td> 4.24 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203344_s_at </td> <td> 203344_s_at </td> <td> NM_002894 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002894.1 /DEF=Homo sapiens retinoblastoma-binding protein 8 (RBBP8), mRNA. /FEA=mRNA /GEN=RBBP8 /PROD=retinoblastoma-binding protein 8 /DB_XREF=gi:4506440 /UG=Hs.29287 retinoblastoma-binding protein 8 /FL=gb:AF043431.1 gb:NM_002894.1 </td> <td> NM_002894 </td> <td> retinoblastoma binding protein 8 </td> <td> RBBP8 </td> <td> 5932 </td> <td> NM_002894 /// NM_203291 /// NM_203292 /// XM_005258325 /// XM_005258326 /// XM_006722519 /// XM_006722520 /// XM_006722521 /// XM_006722522 </td> <td> 0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000724 // double-strand break repair via homologous recombination // inferred from direct assay /// 0000737 // DNA catabolic process, endonucleolytic // inferred from mutant phenotype /// 0001835 // blastocyst hatching // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0010792 // DNA double-strand break processing involved in repair via single-strand annealing // inferred from mutant phenotype /// 0031572 // G2 DNA damage checkpoint // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay </td> <td> 0000014 // single-stranded DNA endodeoxyribonuclease activity // inferred from mutant phenotype /// 0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from direct assay /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -40.85 </td> <td> 102.12 </td> <td> -4.24 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201750_s_at </td> <td> 201750_s_at </td> <td> NM_001397 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001397.1 /DEF=Homo sapiens endothelin converting enzyme 1 (ECE1), mRNA. /FEA=mRNA /GEN=ECE1 /PROD=endothelin converting enzyme 1 /DB_XREF=gi:4503442 /UG=Hs.288203 endothelin converting enzyme 1 /FL=gb:NM_001397.1 gb:AB031742.1 gb:D49471.1 </td> <td> NM_001397 </td> <td> endothelin converting enzyme 1 </td> <td> ECE1 </td> <td> 1889 </td> <td> NM_001113347 /// NM_001113348 /// NM_001113349 /// NM_001397 /// XM_006710398 </td> <td> 0001921 // positive regulation of receptor recycling // inferred from mutant phenotype /// 0003100 // regulation of systemic arterial blood pressure by endothelin // inferred by curator /// 0006508 // proteolysis // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0010814 // substance P catabolic process // inferred from direct assay /// 0010815 // bradykinin catabolic process // inferred from direct assay /// 0010816 // calcitonin catabolic process // inferred from direct assay /// 0016485 // protein processing // inferred from direct assay /// 0016486 // peptide hormone processing // inferred from direct assay /// 0019229 // regulation of vasoconstriction // inferred by curator /// 0034959 // endothelin maturation // inferred from direct assay /// 0042447 // hormone catabolic process // inferred from direct assay /// 0042733 // embryonic digit morphogenesis // inferred from mutant phenotype /// 0043583 // ear development // inferred from mutant phenotype /// 0060037 // pharyngeal system development // inferred from electronic annotation </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0031302 // intrinsic component of endosome membrane // traceable author statement /// 0031982 // vesicle // inferred from sequence or structural similarity /// 0033093 // Weibel-Palade body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017046 // peptide hormone binding // inferred by curator /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -73.77 </td> <td> 122.01 </td> <td> -4.24 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201734_at </td> <td> 201734_at </td> <td> AI760629 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI760629 /FEA=EST /DB_XREF=gi:5176296 /DB_XREF=est:wi66e06.x1 /CLONE=IMAGE:2398306 /UG=Hs.174139 chloride channel 3 /FL=gb:AF029346.1 gb:NM_001829.1 gb:AF172729.1 </td> <td> AI760629 </td> <td> chloride channel, voltage-sensitive 3 </td> <td> CLCN3 </td> <td> 1182 </td> <td> NM_001243372 /// NM_001243374 /// NM_001829 /// NM_173872 /// XM_005262726 </td> <td> 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0006885 // regulation of pH // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0044070 // regulation of anion transport // traceable author statement /// 0048388 // endosomal lumen acidification // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 1902476 // chloride transmembrane transport // inferred from electronic annotation /// 1902476 // chloride transmembrane transport // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // non-traceable author statement /// 0012506 // vesicle membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from direct assay /// 0030554 // adenyl nucleotide binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // non-traceable author statement /// 0046982 // protein heterodimerization activity // inferred from direct assay </td> <td> 102.78 </td> <td> 333.64 </td> <td> 4.24 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202916_s_at </td> <td> 202916_s_at </td> <td> NM_014864 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014864.1 /DEF=Homo sapiens KIAA0475 gene product (KIAA0475), mRNA. /FEA=mRNA /GEN=KIAA0475 /PROD=KIAA0475 gene product /DB_XREF=gi:7662149 /UG=Hs.5737 KIAA0475 gene product /FL=gb:AB007944.1 gb:NM_014864.1 </td> <td> NM_014864 </td> <td> family with sequence similarity 20, member B </td> <td> FAM20B </td> <td> 9917 </td> <td> NM_014864 </td> <td> 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from direct assay </td> <td> 46.65 </td> <td> 51.65 </td> <td> 4.24 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 211383_s_at </td> <td> 211383_s_at </td> <td> AL136827 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136827.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434F2427 (from clone DKFZp434F2427); complete cds.  /FEA=mRNA /GEN=DKFZp434F2427 /PROD=hypothetical protein /DB_XREF=gi:6807664 /UG=Hs.27207 KIAA0982 protein /FL=gb:AL136827.1 </td> <td> AL136827 </td> <td> WD repeat domain 37 </td> <td> WDR37 </td> <td> 22884 </td> <td> NM_014023 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 73.60 </td> <td> 154.50 </td> <td> 4.24 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204072_s_at </td> <td> 204072_s_at </td> <td> NM_023037 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_023037.1 /DEF=Homo sapiens putative gene product (13CDNA73), mRNA. /FEA=mRNA /GEN=13CDNA73 /PROD=putative gene product /DB_XREF=gi:12957487 /UG=Hs.181304 putative gene product /FL=gb:NM_023037.1 </td> <td> NM_023037 </td> <td> furry homolog (Drosophila) </td> <td> FRY </td> <td> 10129 </td> <td> NM_023037 /// XM_006719749 </td> <td>  </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation </td> <td> 52.60 </td> <td> 99.05 </td> <td> 4.24 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218698_at </td> <td> 218698_at </td> <td> NM_015957 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015957.1 /DEF=Homo sapiens CGI-29 protein (LOC51074), mRNA. /FEA=mRNA /GEN=LOC51074 /PROD=CGI-29 protein /DB_XREF=gi:7705723 /UG=Hs.104058 CGI-29 protein /FL=gb:AF132963.1 gb:NM_015957.1 </td> <td> NM_015957 </td> <td> APAF1 interacting protein </td> <td> APIP </td> <td> 51074 </td> <td> NM_015957 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006595 // polyamine metabolic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0019284 // L-methionine biosynthetic process from S-adenosylmethionine // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // inferred from mutant phenotype /// 0019509 // L-methionine salvage from methylthioadenosine // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046570 // methylthioribulose 1-phosphate dehydratase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 54.58 </td> <td> 122.99 </td> <td> 4.24 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 220494_s_at </td> <td> 220494_s_at </td> <td> NM_018678 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018678.1 /DEF=Homo sapiens lipopolysaccharide specific response-68 protein (LSR68), mRNA.  /FEA=mRNA /GEN=LSR68 /PROD=lipopolysaccharide specific response-68 protein /DB_XREF=gi:8923914 /UG=Hs.103189 lipopolysaccharide specific response-68 protein /FL=gb:AF147723.1 gb:NM_018678.1 </td> <td> NM_018678 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -155.17 </td> <td> 253.04 </td> <td> -4.23 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 214737_x_at </td> <td> 214737_x_at </td> <td> AV725195 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV725195 /FEA=EST /DB_XREF=gi:10830339 /DB_XREF=est:AV725195 /CLONE=HTCBCH08 /UG=Hs.182447 heterogeneous nuclear ribonucleoprotein C (C1C2) </td> <td> AV725195 </td> <td> heterogeneous nuclear ribonucleoprotein C (C1/C2) </td> <td> HNRNPC </td> <td> 3183 </td> <td> NM_001077442 /// NM_001077443 /// NM_004500 /// NM_031314 /// XM_006720124 /// XM_006720125 /// XM_006720126 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0045120 // pronucleus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003729 // mRNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008266 // poly(U) RNA binding // inferred from direct assay /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -208.17 </td> <td> 970.34 </td> <td> -4.23 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209683_at </td> <td> 209683_at </td> <td> AA243659 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA243659 /FEA=EST /DB_XREF=gi:1874478 /DB_XREF=est:zr68c06.s1 /CLONE=IMAGE:668554 /UG=Hs.4863 hypothetical protein DKFZp566A1524 /FL=gb:AL136704.1 </td> <td> AA243659 </td> <td> family with sequence similarity 49, member A </td> <td> FAM49A </td> <td> 81553 </td> <td> NM_030797 /// XM_005262630 /// XM_006712108 </td> <td>  </td> <td> 0005622 // intracellular // inferred from direct assay </td> <td>  </td> <td> 35.90 </td> <td> 43.08 </td> <td> 4.23 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204715_at </td> <td> 204715_at </td> <td> NM_015368 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015368.1 /DEF=Homo sapiens pannexin 1 (PANX1), mRNA. /FEA=mRNA /GEN=PANX1 /PROD=pannexin 1 /DB_XREF=gi:7662507 /UG=Hs.30985 pannexin 1 /FL=gb:AF093239.1 gb:NM_015368.1 </td> <td> NM_015368 </td> <td> pannexin 1 </td> <td> PANX1 </td> <td> 24145 </td> <td> NM_015368 /// XM_005273863 </td> <td> 0002931 // response to ischemia // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from direct assay /// 0006816 // calcium ion transport // inferred from mutant phenotype /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0033198 // response to ATP // inferred from electronic annotation /// 0034214 // protein hexamerization // inferred from direct assay /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050717 // positive regulation of interleukin-1 alpha secretion // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005921 // gap junction // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0032059 // bleb // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0002020 // protease binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005243 // gap junction channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from electronic annotation /// 0015267 // channel activity // inferred from electronic annotation /// 0022840 // leak channel activity // inferred from mutant phenotype /// 0044325 // ion channel binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation /// 0055077 // gap junction hemi-channel activity // inferred from direct assay /// 0097110 // scaffold protein binding // inferred from electronic annotation </td> <td> -77.72 </td> <td> 107.14 </td> <td> -4.23 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203927_at </td> <td> 203927_at </td> <td> NM_004556 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004556.1 /DEF=Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon (NFKBIE), mRNA.  /FEA=mRNA /GEN=NFKBIE /PROD=nuclear factor of kappa light polypeptide geneenhancer in B-cells inhibitor, epsilon /DB_XREF=gi:4758805 /UG=Hs.91640 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon /FL=gb:U91616.1 gb:NM_004556.1 </td> <td> NM_004556 </td> <td> nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon </td> <td> NFKBIE </td> <td> 4794 </td> <td> NM_004556 </td> <td> 0042942 // D-serine transport // inferred from electronic annotation /// 0042994 // cytoplasmic sequestering of transcription factor // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -38.75 </td> <td> 83.50 </td> <td> -4.23 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 208319_s_at </td> <td> 208319_s_at </td> <td> NM_006743 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006743.1 /DEF=Homo sapiens RNA binding motif protein 3 (RBM3), mRNA. /FEA=mRNA /GEN=RBM3 /PROD=RNA binding motif protein 3 /DB_XREF=gi:5803136 /UG=Hs.301404 RNA binding motif protein 3 /FL=gb:NM_006743.1 gb:U28686.1 </td> <td> NM_006743 </td> <td> RNA binding motif (RNP1, RRM) protein 3 </td> <td> RBM3 </td> <td> 5935 </td> <td> NM_001017430 /// NM_001017431 /// NM_006743 </td> <td> 0006396 // RNA processing // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0015934 // large ribosomal subunit // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043023 // ribosomal large subunit binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 111.92 </td> <td> 456.64 </td> <td> 4.23 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212474_at </td> <td> 212474_at </td> <td> D87682 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D87682.1 /DEF=Human mRNA for KIAA0241 gene, partial cds. /FEA=mRNA /GEN=KIAA0241 /DB_XREF=gi:1663699 /UG=Hs.150275 KIAA0241 protein </td> <td> D87682 </td> <td> AVL9 homolog (S. cerevisiase) </td> <td> AVL9 </td> <td> 23080 </td> <td> NM_015060 /// XM_005249668 /// XM_005249669 /// XM_005249670 /// XM_005249671 </td> <td> 0016477 // cell migration // inferred from direct assay </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay </td> <td>  </td> <td> 56.60 </td> <td> 88.10 </td> <td> 4.22 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218694_at </td> <td> 218694_at </td> <td> NM_016608 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016608.1 /DEF=Homo sapiens ALEX1 protein (LOC51309), mRNA. /FEA=mRNA /GEN=LOC51309 /PROD=ALEX1 protein /DB_XREF=gi:7706142 /UG=Hs.9728 ALEX1 protein /FL=gb:AF248963.1 gb:BC002691.1 gb:AB039670.1 gb:NM_016608.1 </td> <td> NM_016608 </td> <td> armadillo repeat containing, X-linked 1 </td> <td> ARMCX1 </td> <td> 51309 </td> <td> NM_016608 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 60.25 </td> <td> 130.45 </td> <td> 4.22 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218360_at </td> <td> 218360_at </td> <td> NM_020673 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020673.1 /DEF=Homo sapiens RAB22A, member RAS oncogene family (RAB22A), mRNA. /FEA=mRNA /GEN=RAB22A /PROD=RAB22A, member RAS oncogene family /DB_XREF=gi:10190713 /UG=Hs.288968 RAB22A, member RAS oncogene family /FL=gb:NM_020673.1 gb:AF091034.2 </td> <td> NM_020673 </td> <td> RAB22A, member RAS oncogene family </td> <td> RAB22A </td> <td> 57403 </td> <td> NM_020673 /// XM_005260469 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007032 // endosome organization // inferred from expression pattern /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045335 // phagocytic vesicle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay </td> <td> -78.18 </td> <td> 165.14 </td> <td> -4.22 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201303_at </td> <td> 201303_at </td> <td> NM_014740 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014740.1 /DEF=Homo sapiens KIAA0111 gene product (KIAA0111), mRNA. /FEA=mRNA /GEN=KIAA0111 /PROD=KIAA0111 gene product /DB_XREF=gi:7661919 /UG=Hs.79768 KIAA0111 gene product /FL=gb:BC003662.1 gb:BC004386.1 gb:D21853.1 gb:NM_014740.1 </td> <td> NM_014740 </td> <td> eukaryotic translation initiation factor 4A3 </td> <td> EIF4A3 </td> <td> 9775 </td> <td> NM_014740 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0017148 // negative regulation of translation // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from mutant phenotype /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0004004 // ATP-dependent RNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008143 // poly(A) binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 108.90 </td> <td> 510.62 </td> <td> 4.22 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203359_s_at </td> <td> 203359_s_at </td> <td> AL525412 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL525412 /FEA=EST /DB_XREF=gi:12788905 /DB_XREF=est:AL525412 /CLONE=CS0DC011YJ12 (5 prime) /UG=Hs.78221 c-myc binding protein /FL=gb:D50692.1 gb:AB007191.2 gb:NM_012333.2 </td> <td> AL525412 </td> <td> GJA9-MYCBP readthrough /// MYC binding protein </td> <td> GJA9-MYCBP /// MYCBP </td> <td> 26292 /// 100527950 </td> <td> NM_012333 /// NR_037632 /// NR_037633 /// NR_037634 /// NR_037635 /// NR_037636 /// NR_037637 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0007154 // cell communication // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0005922 // connexon complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 40.73 </td> <td> 66.19 </td> <td> 4.22 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201254_x_at </td> <td> 201254_x_at </td> <td> NM_001010 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001010.1 /DEF=Homo sapiens ribosomal protein S6 (RPS6), mRNA. /FEA=mRNA /GEN=RPS6 /PROD=ribosomal protein S6 /DB_XREF=gi:4506730 /UG=Hs.241507 ribosomal protein S6 /FL=gb:M20020.1 gb:NM_001010.1 </td> <td> NM_001010 </td> <td> ribosomal protein S6 </td> <td> RPS6 </td> <td> 6194 </td> <td> NM_001010 </td> <td> 0000028 // ribosomal small subunit assembly // inferred from electronic annotation /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0031929 // TOR signaling // inferred from direct assay /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030425 // dendrite // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0044297 // cell body // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -912.05 </td> <td> 4285.52 </td> <td> -4.22 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 213372_at </td> <td> 213372_at </td> <td> AW173157 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW173157 /FEA=EST /DB_XREF=gi:6439105 /DB_XREF=est:xj84a12.x1 /CLONE=IMAGE:2663902 /UG=Hs.26860 Homo sapiens mRNA; cDNA DKFZp586G1922 (from clone DKFZp586G1922) </td> <td> AW173157 </td> <td> progestin and adipoQ receptor family member III </td> <td> PAQR3 </td> <td> 152559 </td> <td> NM_001040202 /// NM_177453 /// XM_005262769 /// XM_005262770 /// XM_006714104 /// XM_006714105 /// XM_006714106 /// XM_006714107 </td> <td> 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030500 // regulation of bone mineralization // inferred from electronic annotation /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034067 // protein localization to Golgi apparatus // inferred from physical interaction /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // not recorded /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019208 // phosphatase regulator activity // inferred from electronic annotation </td> <td> 38.53 </td> <td> 50.51 </td> <td> 4.22 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 216952_s_at </td> <td> 216952_s_at </td> <td> M94363 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:M94363 /DEF=Human lamin B2 (LAMB2) gene and ppv1 gene sequence /FEA=mRNA /DB_XREF=gi:186920 /UG=Hs.76084 lamin B2 </td> <td> M94363 </td> <td> lamin B2 </td> <td> LMNB2 </td> <td> 84823 </td> <td> NM_032737 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005638 // lamin filament // inferred from electronic annotation /// 0005652 // nuclear lamina // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation </td> <td> 58.95 </td> <td> 173.57 </td> <td> 4.21 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212518_at </td> <td> 212518_at </td> <td> AB011161 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB011161.1 /DEF=Homo sapiens mRNA for KIAA0589 protein, partial cds. /FEA=mRNA /GEN=KIAA0589 /PROD=KIAA0589 protein /DB_XREF=gi:3043701 /UG=Hs.275182 phosphatidylinositol-4-phosphate 5-kinase, type I, gamma </td> <td> AB011161 </td> <td> phosphatidylinositol-4-phosphate 5-kinase, type I, gamma </td> <td> PIP5K1C </td> <td> 23396 </td> <td> NM_001195733 /// NM_012398 /// XM_005259523 /// XM_006722712 /// XR_430133 </td> <td> 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006887 // exocytosis // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006909 // phagocytosis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007016 // cytoskeletal anchoring at plasma membrane // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016079 // synaptic vesicle exocytosis // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030593 // neutrophil chemotaxis // traceable author statement /// 0034333 // adherens junction assembly // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048488 // synaptic vesicle endocytosis // traceable author statement /// 0070527 // platelet aggregation // inferred from electronic annotation /// 0072583 // clathrin-mediated endocytosis // traceable author statement </td> <td> 0001891 // phagocytic cup // inferred from electronic annotation /// 0001931 // uropod // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016307 // phosphatidylinositol phosphate kinase activity // inferred from electronic annotation /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 1990147 // talin binding // inferred from electronic annotation </td> <td> 58.13 </td> <td> 160.01 </td> <td> 4.21 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 208724_s_at </td> <td> 208724_s_at </td> <td> BC000905 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000905.1 /DEF=Homo sapiens, RAB1, member RAS oncogene family, clone MGC:5233, mRNA, complete cds.  /FEA=mRNA /PROD=RAB1, member RAS oncogene family /DB_XREF=gi:12654174 /UG=Hs.3642 RAB1, member RAS oncogene family /FL=gb:BC000905.1 </td> <td> BC000905 </td> <td> RAB1A, member RAS oncogene family </td> <td> RAB1A </td> <td> 5861 </td> <td> NM_004161 /// NM_015543 /// XM_005264468 </td> <td> 0000045 // autophagic vacuole assembly // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0030252 // growth hormone secretion // inferred from mutant phenotype /// 0042742 // defense response to bacterium // inferred from mutant phenotype /// 0047496 // vesicle transport along microtubule // inferred from mutant phenotype /// 0072606 // interleukin-8 secretion // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 317.95 </td> <td> 1635.33 </td> <td> 4.21 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 221896_s_at </td> <td> 221896_s_at </td> <td> BE739519 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE739519 /FEA=EST /DB_XREF=gi:10153511 /DB_XREF=est:601556450T1 /CLONE=IMAGE:3826141 /UG=Hs.7917 DKFZP564K247 protein </td> <td> BE739519 </td> <td> HIG1 hypoxia inducible domain family, member 1A </td> <td> HIGD1A </td> <td> 25994 </td> <td> NM_001099668 /// NM_001099669 /// NM_014056 </td> <td> 0006950 // response to stress // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td>  </td> <td> 104.40 </td> <td> 409.18 </td> <td> 4.21 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 219182_at </td> <td> 219182_at </td> <td> NM_024533 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024533.1 /DEF=Homo sapiens hypothetical protein FLJ22167 (FLJ22167), mRNA. /FEA=mRNA /GEN=FLJ22167 /PROD=hypothetical protein FLJ22167 /DB_XREF=gi:13375685 /UG=Hs.6853 hypothetical protein FLJ22167 /FL=gb:NM_024533.1 </td> <td> NM_024533 </td> <td> transmembrane protein 231 </td> <td> TMEM231 </td> <td> 79583 </td> <td> NM_001077416 /// NM_001077418 /// NR_074083 </td> <td> 0007224 // smoothened signaling pathway // inferred from sequence or structural similarity /// 0030030 // cell projection organization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from sequence or structural similarity </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0035869 // ciliary transition zone // inferred from sequence or structural similarity /// 0036038 // TCTN-B9D complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // ciliary membrane // inferred from sequence or structural similarity </td> <td>  </td> <td> -35.23 </td> <td> 93.59 </td> <td> -4.21 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217200_x_at </td> <td> 217200_x_at </td> <td> U06715 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U06715.1 /DEF=Human cytochrome B561, HCYTO B561, mRNA, partial cds. /FEA=mRNA /GEN=B561 /PROD=HCYTO B561 /DB_XREF=gi:476590 /UG=Hs.153028 cytochrome b-561 </td> <td> U06715 </td> <td> cytochrome b561 </td> <td> CYB561 </td> <td> 1534 </td> <td> NM_001017916 /// NM_001017917 /// NM_001017918 /// NM_001915 /// XM_005257090 /// XM_005257091 /// XM_005257092 /// XM_006721727 </td> <td> 0022900 // electron transport chain // non-traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement </td> <td> 0000293 // ferric-chelate reductase activity // inferred from sequence or structural similarity /// 0022865 // transmembrane electron transfer carrier // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 47.57 </td> <td> 171.54 </td> <td> 4.21 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217996_at </td> <td> 217996_at </td> <td> AA576961 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA576961 /FEA=EST /DB_XREF=gi:2354435 /DB_XREF=est:nm82d08.s1 /CLONE=IMAGE:1074735 /UG=Hs.82101 pleckstrin homology-like domain, family A, member 1 /FL=gb:NM_007350.1 </td> <td> AA576961 </td> <td> pleckstrin homology-like domain, family A, member 1 </td> <td> PHLDA1 </td> <td> 22822 </td> <td> NM_007350 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0021879 // forebrain neuron differentiation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045210 // FasL biosynthetic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> -131.43 </td> <td> 360.99 </td> <td> -4.21 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 216125_s_at </td> <td> 216125_s_at </td> <td> AF064606 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF064606.1 /DEF=Homo sapiens KB07 protein mRNA, partial cds. /FEA=mRNA /PROD=KB07 protein /DB_XREF=gi:3152665 /UG=Hs.306242 Homo sapiens KB07 protein mRNA, partial cds </td> <td> AF064606 </td> <td> RAN binding protein 9 </td> <td> RANBP9 </td> <td> 10048 </td> <td> NM_005493 /// XM_006714945 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0007020 // microtubule nucleation // non-traceable author statement /// 0007411 // axon guidance // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005875 // microtubule associated complex // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> -48.95 </td> <td> 104.53 </td> <td> -4.21 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217867_x_at </td> <td> 217867_x_at </td> <td> NM_012105 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012105.1 /DEF=Homo sapiens beta-site APP-cleaving enzyme 2 (BACE2), mRNA. /FEA=mRNA /GEN=BACE2 /PROD=beta-site APP-cleaving enzyme 2 /DB_XREF=gi:6912263 /UG=Hs.271411 beta-site APP-cleaving enzyme 2 /FL=gb:AF117892.1 gb:AF050171.1 gb:AF200192.1 gb:AF200342.1 gb:AF204944.1 gb:AF178532.1 gb:NM_012105.1 </td> <td> NM_012105 </td> <td> beta-site APP-cleaving enzyme 2 </td> <td> BACE2 </td> <td> 25825 </td> <td> NM_012105 /// NM_138991 /// NM_138992 </td> <td> 0006508 // proteolysis // non-traceable author statement /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0016486 // peptide hormone processing // non-traceable author statement /// 0042985 // negative regulation of amyloid precursor protein biosynthetic process // inferred from mutant phenotype </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement </td> <td> 0004190 // aspartic-type endopeptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -118.18 </td> <td> 357.16 </td> <td> -4.21 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 213164_at </td> <td> 213164_at </td> <td> AI867198 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI867198 /FEA=EST /DB_XREF=gi:5540214 /DB_XREF=est:wa01c11.x1 /CLONE=IMAGE:2296820 /UG=Hs.324787 solute carrier family 5 (inositol transporters), member 3 /FL=gb:NM_006933.1 </td> <td> AI867198 </td> <td> solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 </td> <td> SLC5A3 </td> <td> 6526 </td> <td> NM_006933 </td> <td> 0006020 // inositol metabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0015798 // myo-inositol transport // traceable author statement /// 0043576 // regulation of respiratory gaseous exchange // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0015935 // small ribosomal subunit // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0005367 // myo-inositol:sodium symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation </td> <td> 49.22 </td> <td> 45.21 </td> <td> 4.21 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217877_s_at </td> <td> 217877_s_at </td> <td> NM_021639 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021639.1 /DEF=Homo sapiens hypothetical protein SP192 (SP192), mRNA. /FEA=mRNA /GEN=SP192 /PROD=hypothetical protein SP192 /DB_XREF=gi:11056015 /UG=Hs.169854 hypothetical protein SP192 /FL=gb:NM_021639.1 </td> <td> NM_021639 </td> <td> GC-rich promoter binding protein 1-like 1 </td> <td> GPBP1L1 </td> <td> 60313 </td> <td> NM_021639 /// XM_005271094 /// XM_005271095 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation </td> <td> -63.62 </td> <td> 173.19 </td> <td> -4.20 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218123_at </td> <td> 218123_at </td> <td> NM_017835 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017835.1 /DEF=Homo sapiens chromosome 21 open reading frame 59 (C21ORF59), mRNA. /FEA=mRNA /GEN=C21ORF59 /PROD=hypothetical protein FLJ20467 /DB_XREF=gi:8923436 /UG=Hs.5811 chromosome 21 open reading frame 59 /FL=gb:NM_021254.1 gb:BC000709.1 gb:NM_017835.1 gb:AF282851.1 </td> <td> NM_017835 </td> <td> chromosome 21 open reading frame 59 </td> <td> C21orf59 </td> <td> 56683 </td> <td> NM_017835 /// NM_021254 /// NR_036552 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay </td> <td>  </td> <td> 41.00 </td> <td> 131.32 </td> <td> 4.20 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 211612_s_at </td> <td> 211612_s_at </td> <td> U62858 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U62858.1 /DEF=Human interleukin-13 receptor mRNA, complete cds. /FEA=mRNA /PROD=interleukin-13 receptor /DB_XREF=gi:1695875 /FL=gb:U62858.1 </td> <td> U62858 </td> <td> interleukin 13 receptor, alpha 1 </td> <td> IL13RA1 </td> <td> 3597 </td> <td> NM_001560 /// XM_005262411 </td> <td> 0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0035772 // interleukin-13-mediated signaling pathway // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005898 // interleukin-13 receptor complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016515 // interleukin-13 receptor activity // inferred from electronic annotation </td> <td> -48.10 </td> <td> 149.32 </td> <td> -4.20 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 205120_s_at </td> <td> 205120_s_at </td> <td> U29586 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U29586.1 /DEF=Human beta-sarcoglycan dystrophin-associated glycoprotein mRNA, complete cds.  /FEA=mRNA /PROD=dystrophin-associated glycoprotein /DB_XREF=gi:1794188 /UG=Hs.77501 sarcoglycan, beta (43kD dystrophin-associated glycoprotein) /FL=gb:U31116.1 gb:U29586.1 gb:NM_000232.1 </td> <td> U29586 </td> <td> sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) </td> <td> SGCB </td> <td> 6443 </td> <td> NM_000232 /// XM_006714046 /// XM_006714047 /// XM_006714048 /// XM_006714049 </td> <td> 0007517 // muscle organ development // inferred from electronic annotation /// 0035051 // cardiocyte differentiation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016010 // dystrophin-associated glycoprotein complex // inferred from direct assay /// 0016012 // sarcoglycan complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation </td> <td>  </td> <td> -55.03 </td> <td> 187.99 </td> <td> -4.20 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 205434_s_at </td> <td> 205434_s_at </td> <td> AW451954 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW451954 /FEA=EST /DB_XREF=gi:6992730 /DB_XREF=est:UI-H-BI3-alt-h-06-0-UI.s1 /CLONE=IMAGE:3068771 /UG=Hs.135941 KIAA1048 protein /FL=gb:AB028971.1 gb:NM_014911.1 </td> <td> AW451954 </td> <td> AP2 associated kinase 1 </td> <td> AAK1 </td> <td> 22848 </td> <td> NM_014911 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0006897 // endocytosis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from direct assay /// 0045747 // positive regulation of Notch signaling pathway // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from direct assay /// 2000369 // regulation of clathrin-mediated endocytosis // inferred from direct assay /// 2000369 // regulation of clathrin-mediated endocytosis // inferred from mutant phenotype </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019897 // extrinsic component of plasma membrane // inferred from sequence or structural similarity /// 0030136 // clathrin-coated vesicle // inferred from sequence or structural similarity /// 0031252 // cell leading edge // inferred from sequence or structural similarity /// 0043195 // terminal bouton // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005112 // Notch binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0035612 // AP-2 adaptor complex binding // inferred from direct assay </td> <td> 60.82 </td> <td> 134.46 </td> <td> 4.20 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 219016_at </td> <td> 219016_at </td> <td> NM_021826 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021826.1 /DEF=Homo sapiens hypothetical protein FLJ13149 (FLJ13149), mRNA. /FEA=mRNA /GEN=FLJ13149 /PROD=hypothetical protein FLJ13149 /DB_XREF=gi:11141902 /UG=Hs.112188 hypothetical protein FLJ13149 /FL=gb:NM_021826.1 </td> <td> NM_021826 </td> <td> FAST kinase domains 5 </td> <td> FASTKD5 </td> <td> 60493 </td> <td> NM_021826 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0045333 // cellular respiration // inferred from sequence or structural similarity </td> <td> 0005739 // mitochondrion // inferred from direct assay </td> <td> 0004672 // protein kinase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 43.48 </td> <td> 93.01 </td> <td> 4.20 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202723_s_at </td> <td> 202723_s_at </td> <td> AW117498 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW117498 /FEA=EST /DB_XREF=gi:6086082 /DB_XREF=est:xd92e10.x1 /CLONE=IMAGE:2605098 /UG=Hs.170133 forkhead box O1A (rhabdomyosarcoma) /FL=gb:AF032885.1 gb:U02310.1 gb:NM_002015.2 </td> <td> AW117498 </td> <td> forkhead box O1 </td> <td> FOXO1 </td> <td> 2308 </td> <td> NM_002015 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001568 // blood vessel development // not recorded /// 0001659 // temperature homeostasis // inferred from sequence or structural similarity /// 0001678 // cellular glucose homeostasis // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006473 // protein acetylation // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from sequence or structural similarity /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007389 // pattern specification process // not recorded /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009267 // cellular response to starvation // inferred from direct assay /// 0009267 // cellular response to starvation // inferred from sequence or structural similarity /// 0009790 // embryo development //  /// 0009888 // tissue development // not recorded /// 0010508 // positive regulation of autophagy // inferred from mutant phenotype /// 0031018 // endocrine pancreas development // traceable author statement /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0032873 // negative regulation of stress-activated MAPK cascade // inferred from direct assay /// 0034599 // cellular response to oxidative stress // inferred from sequence or structural similarity /// 0035947 // regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045444 // fat cell differentiation // inferred from sequence or structural similarity /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045722 // positive regulation of gluconeogenesis // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0070417 // cellular response to cold // inferred from sequence or structural similarity /// 0071455 // cellular response to hyperoxia // inferred from direct assay /// 0071732 // cellular response to nitric oxide // inferred from sequence or structural similarity /// 2000505 // regulation of energy homeostasis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement </td> <td> 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008301 // DNA binding, bending // not recorded /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0051721 // protein phosphatase 2A binding // inferred from sequence or structural similarity </td> <td> -82.12 </td> <td> 213.59 </td> <td> -4.20 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202391_at </td> <td> 202391_at </td> <td> NM_006317 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006317.1 /DEF=Homo sapiens brain acid-soluble protein 1 (BASP1), mRNA. /FEA=mRNA /GEN=BASP1 /PROD=brain acid-soluble protein 1 /DB_XREF=gi:5453749 /UG=Hs.79516 brain abundant, membrane attached signal protein 1 /FL=gb:BC000518.1 gb:AF039656.1 gb:NM_006317.1 </td> <td> NM_006317 </td> <td> brain abundant, membrane attached signal protein 1 </td> <td> BASP1 </td> <td> 10409 </td> <td> NM_001271606 /// NM_006317 </td> <td> 0007356 // thorax and anterior abdomen determination // inferred from sequence or structural similarity /// 0008406 // gonad development // inferred from sequence or structural similarity /// 0021762 // substantia nigra development // inferred from expression pattern /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0060231 // mesenchymal to epithelial transition // inferred from sequence or structural similarity /// 0060421 // positive regulation of heart growth // inferred from sequence or structural similarity /// 0060539 // diaphragm development // inferred from sequence or structural similarity /// 0072075 // metanephric mesenchyme development // inferred from sequence or structural similarity /// 0072112 // glomerular visceral epithelial cell differentiation // inferred from sequence or structural similarity /// 2001076 // positive regulation of metanephric ureteric bud development // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0008180 // COP9 signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity </td> <td> -360.17 </td> <td> 1363.39 </td> <td> -4.20 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 220956_s_at </td> <td> 220956_s_at </td> <td> NM_017555 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017555.1 /DEF=Homo sapiens hypothetical protein DKFZp434E026 (DKFZp434E026), mRNA.  /FEA=mRNA /GEN=DKFZp434E026 /PROD=hypothetical protein DKFZp434E026 /DB_XREF=gi:8922129 /UG=Hs.9659 hypothetical protein DKFZp434E026 /FL=gb:NM_017555.1 </td> <td> NM_017555 </td> <td> egl-9 family hypoxia-inducible factor 2 /// RAB4B-EGLN2 readthrough (NMD candidate) </td> <td> EGLN2 /// RAB4B-EGLN2 </td> <td> 112398 /// 100529264 </td> <td> NM_017555 /// NM_053046 /// NM_080732 /// NR_037791 </td> <td> 0001558 // regulation of cell growth // non-traceable author statement /// 0001666 // response to hypoxia // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0018401 // peptidyl-proline hydroxylation to 4-hydroxy-L-proline // inferred from direct assay /// 0019511 // peptidyl-proline hydroxylation // inferred from electronic annotation /// 0030520 // intracellular estrogen receptor signaling pathway // non-traceable author statement /// 0043523 // regulation of neuron apoptotic process // inferred from mutant phenotype /// 0045454 // cell redox homeostasis // inferred from direct assay /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0046323 // glucose import // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0071456 // cellular response to hypoxia // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032593 // insulin-responsive compartment // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0008198 // ferrous iron binding // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from direct assay /// 0019826 // oxygen sensor activity // inferred from direct assay /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0031543 // peptidyl-proline dioxygenase activity // inferred from electronic annotation /// 0031545 // peptidyl-proline 4-dioxygenase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> 91.65 </td> <td> 138.03 </td> <td> 4.19 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209022_at </td> <td> 209022_at </td> <td> AK026678 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026678.1 /DEF=Homo sapiens cDNA: FLJ23025 fis, clone LNG01702, highly similar to HUMAUTOND Human autonomously replicating sequence (ARS) mRNA.  /FEA=mRNA /DB_XREF=gi:10439584 /UG=Hs.8217 stromal antigen 2 /FL=gb:BC001765.1 </td> <td> AK026678 </td> <td> stromal antigen 2 </td> <td> STAG2 </td> <td> 10735 </td> <td> NM_001042749 /// NM_001042750 /// NM_001042751 /// NM_001282418 /// NM_006603 /// XM_005262357 /// XM_005262358 /// XM_005262359 /// XM_005262360 /// XM_005262361 /// XM_006724727 /// XM_006724728 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007062 // sister chromatid cohesion // inferred from mutant phenotype /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0032876 // negative regulation of DNA endoreduplication // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // traceable author statement /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -86.80 </td> <td> 358.40 </td> <td> -4.19 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209421_at </td> <td> 209421_at </td> <td> U04045 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U04045.1 /DEF=Human (hMSH2) mRNA, complete cds. /FEA=mRNA /GEN=hMSH2 /DB_XREF=gi:432997 /UG=Hs.78934 mutS (E. coli) homolog 2 (colon cancer, nonpolyposis type 1) /FL=gb:L47583.1 gb:L47582.1 gb:L47581.1 gb:U04045.1 gb:U03911.1 gb:NM_000251.1 </td> <td> U04045 </td> <td> mutS homolog 2 </td> <td> MSH2 </td> <td> 4436 </td> <td> NM_000251 /// NM_001258281 /// XM_005264332 </td> <td> 0000710 // meiotic mismatch repair // not recorded /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002204 // somatic recombination of immunoglobulin genes involved in immune response // inferred from electronic annotation /// 0006119 // oxidative phosphorylation // inferred from electronic annotation /// 0006200 // ATP catabolic process // not recorded /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006281 // DNA repair // inferred from direct assay /// 0006298 // mismatch repair // inferred from direct assay /// 0006298 // mismatch repair // inferred from genetic interaction /// 0006301 // postreplication repair // inferred from direct assay /// 0006302 // double-strand break repair // not recorded /// 0006311 // meiotic gene conversion // not recorded /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0008584 // male gonad development // inferred from sequence or structural similarity /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0010165 // response to X-ray // not recorded /// 0010165 // response to X-ray // inferred from sequence or structural similarity /// 0010224 // response to UV-B // not recorded /// 0010224 // response to UV-B // inferred from sequence or structural similarity /// 0016446 // somatic hypermutation of immunoglobulin genes // not recorded /// 0016447 // somatic recombination of immunoglobulin gene segments // inferred from sequence or structural similarity /// 0019724 // B cell mediated immunity // inferred from sequence or structural similarity /// 0030183 // B cell differentiation // inferred from sequence or structural similarity /// 0031573 // intra-S DNA damage checkpoint // not recorded /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // not recorded /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043570 // maintenance of DNA repeat elements // inferred from mutant phenotype /// 0045128 // negative regulation of reciprocal meiotic recombination // not recorded /// 0045190 // isotype switching // not recorded /// 0045190 // isotype switching // inferred from sequence or structural similarity /// 0045910 // negative regulation of DNA recombination // inferred from direct assay /// 0045910 // negative regulation of DNA recombination // inferred from sequence or structural similarity /// 0051096 // positive regulation of helicase activity // inferred from direct assay </td> <td> 0000228 // nuclear chromosome // not recorded /// 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0032301 // MutSalpha complex // inferred from direct assay /// 0032302 // MutSbeta complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000400 // four-way junction DNA binding // inferred from direct assay /// 0000403 // Y-form DNA binding // not recorded /// 0000404 // heteroduplex DNA loop binding // not recorded /// 0000406 // double-strand/single-strand DNA junction binding // not recorded /// 0003677 // DNA binding // inferred from direct assay /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // not recorded /// 0016887 // ATPase activity // inferred from direct assay /// 0019237 // centromeric DNA binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030983 // mismatched DNA binding // inferred from direct assay /// 0032137 // guanine/thymine mispair binding // inferred from direct assay /// 0032137 // guanine/thymine mispair binding // inferred from mutant phenotype /// 0032139 // dinucleotide insertion or deletion binding // inferred from direct assay /// 0032142 // single guanine insertion binding // inferred from direct assay /// 0032143 // single thymine insertion binding // inferred from direct assay /// 0032181 // dinucleotide repeat insertion binding // inferred from direct assay /// 0032357 // oxidized purine DNA binding // inferred from direct assay /// 0032405 // MutLalpha complex binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043531 // ADP binding // inferred from direct assay </td> <td> 49.85 </td> <td> 63.88 </td> <td> 4.19 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202381_at </td> <td> 202381_at </td> <td> NM_003816 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003816.1 /DEF=Homo sapiens a disintegrin and metalloproteinase domain 9 (meltrin gamma) (ADAM9), mRNA.  /FEA=mRNA /GEN=ADAM9 /PROD=a disintegrin and metalloproteinase domain 9preproprotein /DB_XREF=gi:4501914 /UG=Hs.2442 a disintegrin and metalloproteinase domain 9 (meltrin gamma) /FL=gb:U41766.1 gb:NM_003816.1 </td> <td> NM_003816 </td> <td> ADAM metallopeptidase domain 9 </td> <td> ADAM9 </td> <td> 8754 </td> <td> NM_001005845 /// NM_003816 /// NR_027638 /// NR_027639 /// NR_027878 </td> <td> 0000186 // activation of MAPKK activity // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006509 // membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0007229 // integrin-mediated signaling pathway // inferred by curator /// 0010042 // response to manganese ion // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030216 // keratinocyte differentiation // inferred from expression pattern /// 0030574 // collagen catabolic process // traceable author statement /// 0033627 // cell adhesion mediated by integrin // inferred from mutant phenotype /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from mutant phenotype /// 0033631 // cell-cell adhesion mediated by integrin // inferred from expression pattern /// 0034241 // positive regulation of macrophage fusion // inferred from mutant phenotype /// 0034612 // response to tumor necrosis factor // inferred from direct assay /// 0034616 // response to laminar fluid shear stress // inferred from electronic annotation /// 0042117 // monocyte activation // inferred from mutant phenotype /// 0042542 // response to hydrogen peroxide // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from direct assay /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from sequence or structural similarity /// 0051088 // PMA-inducible membrane protein ectodomain proteolysis // inferred from direct assay /// 0051088 // PMA-inducible membrane protein ectodomain proteolysis // traceable author statement /// 0051384 // response to glucocorticoid // inferred from sequence or structural similarity /// 0051549 // positive regulation of keratinocyte migration // inferred from mutant phenotype /// 0051592 // response to calcium ion // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031233 // intrinsic component of external side of plasma membrane // inferred from sequence or structural similarity </td> <td> 0004222 // metalloendopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from mutant phenotype /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005178 // integrin binding // inferred by curator /// 0005178 // integrin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from mutant phenotype /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from mutant phenotype /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from sequence or structural similarity /// 0043236 // laminin binding // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 45.17 </td> <td> 564.64 </td> <td> 4.19 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209567_at </td> <td> 209567_at </td> <td> BC001811 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001811.1 /DEF=Homo sapiens, Similar to regulator for ribosome resistance homolog (S. cerevisiae), clone MGC:2755, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to regulator for ribosome resistancehomolog (S. cerevisiae) /DB_XREF=gi:12804750 /UG=Hs.71827 KIAA0112 protein; homolog of yeast ribosome biogenesis regulatory protein RRS1 /FL=gb:BC001811.1 </td> <td> BC001811 </td> <td> RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) </td> <td> RRS1 </td> <td> 23212 </td> <td> NM_015169 </td> <td> 0007080 // mitotic metaphase plate congression // inferred from mutant phenotype /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0000794 // condensed nuclear chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 74.55 </td> <td> 115.45 </td> <td> 4.19 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209249_s_at </td> <td> 209249_s_at </td> <td> AF131820 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF131820.1 /DEF=Homo sapiens clone 25077 mRNA sequence, complete cds. /FEA=mRNA /PROD=Unknown /DB_XREF=gi:4406655 /UG=Hs.182470 PTD010  protein /FL=gb:AF060923.1 gb:AL136713.1 gb:AF131820.1 gb:AF078863.1 gb:AB009685.1 gb:NM_014394.1 </td> <td> AF131820 </td> <td> growth hormone inducible transmembrane protein </td> <td> GHITM </td> <td> 27069 </td> <td> NM_014394 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -256.75 </td> <td> 901.12 </td> <td> -4.19 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217839_at </td> <td> 217839_at </td> <td> NM_006070 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006070.1 /DEF=Homo sapiens TRK-fused gene (TFG), mRNA. /FEA=mRNA /GEN=TFG /PROD=TRK-fused gene /DB_XREF=gi:5174718 /UG=Hs.250897 TRK-fused gene /FL=gb:NM_006070.1 </td> <td> NM_006070 </td> <td> TRK-fused gene </td> <td> TFG </td> <td> 10342 </td> <td> NM_001007565 /// NM_001195478 /// NM_001195479 /// NM_006070 /// XM_005247066 /// XM_006713472 /// XM_006713473 </td> <td> 0007165 // signal transduction // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> -232.42 </td> <td> 796.91 </td> <td> -4.18 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212245_at </td> <td> 212245_at </td> <td> AL567779 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL567779 /FEA=EST /DB_XREF=gi:12921478 /DB_XREF=est:AL567779 /CLONE=CS0DF034YB08 (3 prime) /UG=Hs.84775 Human transposon-like element mRNA </td> <td> AL567779 </td> <td> multiple coagulation factor deficiency 2 </td> <td> MCFD2 </td> <td> 90411 </td> <td> NM_001171506 /// NM_001171507 /// NM_001171508 /// NM_001171509 /// NM_001171510 /// NM_001171511 /// NM_139279 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 107.18 </td> <td> 255.26 </td> <td> 4.18 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 214659_x_at </td> <td> 214659_x_at </td> <td> AC007956 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AC007956 /DEF=Homo sapiens chromosome 14 clones CTD-3211F8 and RP11-173A8 containing KIAA0317 gene, complete cds; and unknown gene /FEA=CDS_1 /DB_XREF=gi:7341426 /UG=Hs.159471 ZAP3 protein </td> <td> AC007956 </td> <td> YLP motif containing 1 </td> <td> YLPM1 </td> <td> 56252 </td> <td> NM_019589 /// XM_005267860 /// XR_245704 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006000 // fructose metabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0032204 // regulation of telomere maintenance // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 57.65 </td> <td> 90.33 </td> <td> 4.18 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212652_s_at </td> <td> 212652_s_at </td> <td> AA524345 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA524345 /FEA=EST /DB_XREF=gi:2265273 /DB_XREF=est:ng43a06.s1 /CLONE=IMAGE:937522 /UG=Hs.267812 sorting nexin 4 </td> <td> AA524345 </td> <td> sorting nexin 4 </td> <td> SNX4 </td> <td> 8723 </td> <td> NM_003794 /// NR_073435 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // not recorded /// 0006897 // endocytosis // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0032456 // endocytic recycling // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from mutant phenotype </td> <td> 53.02 </td> <td> 149.99 </td> <td> 4.18 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209850_s_at </td> <td> 209850_s_at </td> <td> BC005406 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005406.1 /DEF=Homo sapiens, Cdc42 effector protein 2, clone MGC:5143, mRNA, complete cds.  /FEA=mRNA /PROD=Cdc42 effector protein 2 /DB_XREF=gi:13529304 /UG=Hs.12289 Cdc42 effector protein 2 /FL=gb:BC005406.1 gb:AF001436.1 gb:AF098290.1 gb:AF163840.1 gb:NM_006779.1 </td> <td> BC005406 </td> <td> CDC42 effector protein (Rho GTPase binding) 2 </td> <td> CDC42EP2 </td> <td> 10435 </td> <td> NM_006779 </td> <td> 0007015 // actin filament organization // non-traceable author statement /// 0008360 // regulation of cell shape // inferred from direct assay /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030838 // positive regulation of actin filament polymerization // inferred from direct assay /// 0031274 // positive regulation of pseudopodium assembly // inferred from direct assay /// 0031334 // positive regulation of protein complex assembly // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0001515 // opioid peptide activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0017049 // GTP-Rho binding // inferred from physical interaction </td> <td> -50.52 </td> <td> 166.04 </td> <td> -4.18 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209206_at </td> <td> 209206_at </td> <td> AV701283 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV701283 /FEA=EST /DB_XREF=gi:10717613 /DB_XREF=est:AV701283 /CLONE=ADAAGD06 /UG=Hs.50785 SEC22, vesicle trafficking protein (S. cerevisiae)-like 1 /FL=gb:BC001364.1 gb:AF047442.1 gb:NM_004892.1 </td> <td> AV701283 </td> <td> vesicle-trafficking protein SEC22b-like /// SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene) </td> <td> LOC102724364 /// SEC22B </td> <td> 9554 /// 102724364 </td> <td> NM_004892 /// XR_426913 /// XR_431332 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 48.53 </td> <td> 73.89 </td> <td> 4.18 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 206481_s_at </td> <td> 206481_s_at </td> <td> NM_001290 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001290.1 /DEF=Homo sapiens LIM domain binding 2 (LDB2), mRNA. /FEA=mRNA /GEN=LDB2 /PROD=LIM domain binding 2 /DB_XREF=gi:4504970 /UG=Hs.4980 LIM domain binding 2 /FL=gb:AF047337.1 gb:AF064492.1 gb:AF068651.1 gb:NM_001290.1 </td> <td> NM_001290 </td> <td> LIM domain binding 2 </td> <td> LDB2 </td> <td> 9079 </td> <td> NM_001130834 /// NM_001290 /// XM_005248197 /// XM_005248198 /// XM_005248201 /// XM_005248202 /// XM_005248203 /// XM_005248205 /// XM_006713975 /// XM_006713976 /// XM_006713977 /// XM_006713978 /// XM_006713979 /// XM_006713980 /// XM_006713981 /// XM_006713982 /// XM_006713983 /// XM_006713984 </td> <td> 0001942 // hair follicle development // inferred from electronic annotation /// 0010669 // epithelial structure maintenance // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0044089 // positive regulation of cellular component biogenesis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation </td> <td> 0000989 // transcription factor binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0030274 // LIM domain binding // inferred from sequence or structural similarity </td> <td> 113.97 </td> <td> 342.41 </td> <td> 4.18 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212853_at </td> <td> 212853_at </td> <td> AA779297 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA779297 /FEA=EST /DB_XREF=gi:2838628 /DB_XREF=est:zj43h11.s1 /CLONE=IMAGE:453093 /UG=Hs.240112 KIAA0276 protein </td> <td> AA779297 </td> <td> DCN1, defective in cullin neddylation 1, domain containing 4 </td> <td> DCUN1D4 </td> <td> 23142 </td> <td> NM_001040402 /// NM_001287755 /// NM_001287757 /// NM_015115 /// XM_005265731 /// XM_005265732 /// XM_005265733 /// XM_005265734 /// XR_245254 /// XR_427521 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -48.85 </td> <td> 86.97 </td> <td> -4.18 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 211911_x_at </td> <td> 211911_x_at </td> <td> L07950 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L07950.1 /DEF=Homo sapiens MHC class I HLA B71 mRNA, complete cds. /FEA=CDS /GEN=HLA-B /PROD=MHC HLA B71 /DB_XREF=gi:307236 /FL=gb:L07950.1 </td> <td> L07950 </td> <td> major histocompatibility complex, class I, B </td> <td> HLA-B </td> <td> 3106 </td> <td> NM_005514 /// XM_005249043 /// XM_005275100 /// XM_005275238 /// XM_005275376 /// XM_005275377 /// XM_005275535 /// XM_006725904 /// XM_006725905 /// XR_246962 /// XR_427830 </td> <td> 0001539 // cilium or flagellum-dependent cell motility // non-traceable author statement /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from direct assay /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002486 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent // inferred from direct assay /// 0002667 // regulation of T cell anergy // inferred from mutant phenotype /// 0006952 // defense response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016045 // detection of bacterium // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032655 // regulation of interleukin-12 production // inferred from mutant phenotype /// 0032675 // regulation of interleukin-6 production // inferred from mutant phenotype /// 0042270 // protection from natural killer cell mediated cytotoxicity // inferred from direct assay /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 2001198 // regulation of dendritic cell differentiation // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005102 // receptor binding // not recorded /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0032395 // MHC class II receptor activity // non-traceable author statement /// 0042605 // peptide antigen binding // not recorded /// 0042605 // peptide antigen binding // inferred from direct assay /// 0042605 // peptide antigen binding // inferred from sequence or structural similarity /// 0046977 // TAP binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> -202.45 </td> <td> 438.38 </td> <td> -4.18 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201870_at </td> <td> 201870_at </td> <td> NM_006809 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006809.1 /DEF=Homo sapiens translocase of outer mitochondrial membrane 34 (TOM34), mRNA.  /FEA=mRNA /GEN=TOM34 /PROD=translocase of outer mitochondrial membrane 34 /DB_XREF=gi:5803204 /UG=Hs.76927 translocase of outer mitochondrial membrane 34 /FL=gb:BC001763.1 gb:U58970.1 gb:NM_006809.1 </td> <td> NM_006809 </td> <td> translocase of outer mitochondrial membrane 34 </td> <td> TOMM34 </td> <td> 10953 </td> <td> NM_006809 /// XM_005260254 /// XR_244131 </td> <td> 0006626 // protein targeting to mitochondrion // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from physical interaction </td> <td> -66.78 </td> <td> 292.94 </td> <td> -4.17 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 222035_s_at </td> <td> 222035_s_at </td> <td> AI984479 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI984479 /FEA=EST /DB_XREF=gi:5811756 /DB_XREF=est:wr83e06.x1 /CLONE=IMAGE:2494306 /UG=Hs.49007 poly(A) polymerase alpha </td> <td> AI984479 </td> <td> poly(A) polymerase alpha </td> <td> PAPOLA </td> <td> 10914 </td> <td> NM_001252006 /// NM_001252007 /// NM_001293627 /// NM_001293628 /// NM_001293632 /// NM_032632 /// XM_005267280 /// XM_005267281 /// XM_005267282 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // non-traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031123 // RNA 3'-end processing // inferred from electronic annotation /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0043631 // RNA polyadenylation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation /// 0004652 // polynucleotide adenylyltransferase activity // not recorded /// 0004652 // polynucleotide adenylyltransferase activity // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 58.75 </td> <td> 190.40 </td> <td> 4.17 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217880_at </td> <td> 217880_at </td> <td> N21397 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N21397 /FEA=EST /DB_XREF=gi:1126567 /DB_XREF=est:yx54e08.s1 /CLONE=IMAGE:265574 /UG=Hs.172405 cell division cycle 27 /FL=gb:NM_001256.1 </td> <td> N21397 </td> <td> cell division cycle 27 </td> <td> CDC27 </td> <td> 996 </td> <td> NM_001114091 /// NM_001256 /// NM_001293089 /// NM_001293091 /// XM_005257892 /// XM_005257895 /// XM_006722217 /// XM_006722218 /// XM_006722219 /// XM_006722220 /// XM_006722221 /// XR_429935 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007091 // metaphase/anaphase transition of mitotic cell cycle // inferred from mutant phenotype /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005819 // spindle // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005876 // spindle microtubule // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction </td> <td> 70.70 </td> <td> 129.80 </td> <td> 4.16 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218491_s_at </td> <td> 218491_s_at </td> <td> NM_014174 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014174.1 /DEF=Homo sapiens HSPC144 protein (HSPC144), mRNA. /FEA=mRNA /GEN=HSPC144 /PROD=HSPC144 protein /DB_XREF=gi:7661803 /UG=Hs.13645 HSPC144 protein /FL=gb:AF161493.1 gb:NM_014174.1 </td> <td> NM_014174 </td> <td> thymocyte nuclear protein 1 </td> <td> THYN1 </td> <td> 29087 </td> <td> NM_001037304 /// NM_001037305 /// NM_014174 /// NM_199297 /// NM_199298 /// XM_005271527 /// XM_005271528 /// XM_006718827 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity </td> <td>  </td> <td> 38.98 </td> <td> 88.96 </td> <td> 4.16 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201516_at </td> <td> 201516_at </td> <td> NM_003132 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003132.1 /DEF=Homo sapiens spermidine synthase (SRM), mRNA. /FEA=mRNA /GEN=SRM /PROD=spermidine synthase /DB_XREF=gi:4507208 /UG=Hs.76244 spermidine synthase /FL=gb:BC000309.1 gb:NM_003132.1 gb:M34338.1 </td> <td> NM_003132 </td> <td> spermidine synthase </td> <td> SRM </td> <td> 6723 </td> <td> NM_003132 </td> <td> 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0008295 // spermidine biosynthetic process // inferred from direct assay /// 0008295 // spermidine biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004766 // spermidine synthase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> 87.85 </td> <td> 283.62 </td> <td> 4.16 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202519_at </td> <td> 202519_at </td> <td> NM_014938 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014938.1 /DEF=Homo sapiens KIAA0867 protein (MONDOA), mRNA. /FEA=mRNA /GEN=MONDOA /PROD=MondoA protein /DB_XREF=gi:7662347 /UG=Hs.52081 KIAA0867 protein /FL=gb:AB020674.1 gb:NM_014938.1 </td> <td> NM_014938 </td> <td> MLX interacting protein </td> <td> MLXIP </td> <td> 22877 </td> <td> NM_014938 /// XM_006719290 /// XM_006719291 /// XM_006719292 /// XM_006719293 /// XM_006719294 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> 87.40 </td> <td> 177.65 </td> <td> 4.16 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 216520_s_at </td> <td> 216520_s_at </td> <td> AF072098 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF072098 /DEF=Homo sapiens HDCMB21P gene, complete cds /FEA=CDS /DB_XREF=gi:5725513 /UG=Hs.279860 tumor protein, translationally-controlled 1 </td> <td> AF072098 </td> <td> uncharacterized LOC101928826 /// tumor protein, translationally-controlled 1 </td> <td> LOC101928826 /// TPT1 </td> <td> 7178 /// 101928826 </td> <td> NM_001286272 /// NM_001286273 /// NM_003295 /// XR_242670 /// XR_250536 /// XR_252641 </td> <td> 0006816 // calcium ion transport // inferred by curator /// 0006874 // cellular calcium ion homeostasis // inferred by curator /// 0009615 // response to virus // inferred from expression pattern /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 1902230 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage // inferred from mutant phenotype /// 2000384 // negative regulation of ectoderm development // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005771 // multivesicular body // inferred from direct assay /// 0045298 // tubulin complex // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -656.72 </td> <td> 3819.26 </td> <td> -4.16 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 208878_s_at </td> <td> 208878_s_at </td> <td> AF092132 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF092132.1 /DEF=Homo sapiens PAK2 mRNA, complete cds. /FEA=mRNA /PROD=PAK2 /DB_XREF=gi:5138913 /UG=Hs.284275 Homo sapiens PAK2 mRNA, complete cds /FL=gb:AF092132.1 </td> <td> AF092132 </td> <td> p21 protein (Cdc42/Rac)-activated kinase 2 </td> <td> PAK2 </td> <td> 5062 </td> <td> NM_002577 </td> <td> 0000278 // mitotic cell cycle // not recorded /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007409 // axonogenesis // not recorded /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // not recorded /// 0030036 // actin cytoskeleton organization // not recorded /// 0031295 // T cell costimulation // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001271 // negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -90.35 </td> <td> 192.07 </td> <td> -4.16 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218115_at </td> <td> 218115_at </td> <td> NM_018154 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018154.1 /DEF=Homo sapiens hypothetical protein FLJ10604 (FLJ10604), mRNA. /FEA=mRNA /GEN=FLJ10604 /PROD=hypothetical protein FLJ10604 /DB_XREF=gi:8922548 /UG=Hs.26516 hypothetical protein FLJ10604 /FL=gb:NM_018154.1 </td> <td> NM_018154 </td> <td> anti-silencing function 1B histone chaperone </td> <td> ASF1B </td> <td> 55723 </td> <td> NM_018154 </td> <td> 0006333 // chromatin assembly or disassembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006335 // DNA replication-dependent nucleosome assembly // inferred from direct assay /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042393 // histone binding // inferred from electronic annotation </td> <td> 40.20 </td> <td> 133.62 </td> <td> 4.16 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 213838_at </td> <td> 213838_at </td> <td> AA191426 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA191426 /FEA=EST /DB_XREF=gi:1780105 /DB_XREF=est:zp83g09.s1 /CLONE=IMAGE:626848 /UG=Hs.279886 RAN binding protein 9 </td> <td> AA191426 </td> <td> nucleolar protein 7, 27kDa </td> <td> NOL7 </td> <td> 51406 </td> <td> NM_016167 /// XM_005249173 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 81.40 </td> <td> 126.17 </td> <td> 4.16 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 208722_s_at </td> <td> 208722_s_at </td> <td> BC001081 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001081.1 /DEF=Homo sapiens, anaphase-promoting complex subunit 5, clone MGC:2750, mRNA, complete cds.  /FEA=mRNA /PROD=anaphase-promoting complex subunit 5 /DB_XREF=gi:12654502 /UG=Hs.7101 anaphase-promoting complex subunit 5 /FL=gb:BC001081.1 gb:BC001950.1 gb:AF191339.1 gb:NM_016237.1 </td> <td> BC001081 </td> <td> anaphase promoting complex subunit 5 </td> <td> ANAPC5 </td> <td> 51433 </td> <td> NM_001137559 /// NM_016237 /// XM_005253900 /// XM_006719449 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000090 // mitotic anaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction </td> <td> 41.18 </td> <td> 167.29 </td> <td> 4.16 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 215165_x_at </td> <td> 215165_x_at </td> <td> AL080099 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL080099.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564G1272 (from clone DKFZp564G1272); partial cds.  /FEA=mRNA /GEN=DKFZp564G1272 /PROD=hypothetical protein /DB_XREF=gi:5262522 /UG=Hs.2057 uridine monophosphate synthetase (orotate phosphoribosyl transferase and orotidine-5-decarboxylase) </td> <td> AL080099 </td> <td> uridine monophosphate synthetase </td> <td> UMPS </td> <td> 7372 </td> <td> NM_000373 /// NR_033434 /// NR_033437 </td> <td> 0006206 // pyrimidine nucleobase metabolic process // traceable author statement /// 0006207 // 'de novo' pyrimidine nucleobase biosynthetic process // inferred from electronic annotation /// 0006221 // pyrimidine nucleotide biosynthetic process // inferred from electronic annotation /// 0006222 // UMP biosynthetic process // inferred from direct assay /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0044205 // 'de novo' UMP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004588 // orotate phosphoribosyltransferase activity // inferred from direct assay /// 0004588 // orotate phosphoribosyltransferase activity // traceable author statement /// 0004590 // orotidine-5'-phosphate decarboxylase activity // inferred from direct assay /// 0004590 // orotidine-5'-phosphate decarboxylase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation </td> <td> 60.70 </td> <td> 119.40 </td> <td> 4.16 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 210676_x_at </td> <td> 210676_x_at </td> <td> U64675 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U64675.2 /DEF=Homo sapiens sperm membrane protein BS-63 mRNA, complete cds. /FEA=mRNA /PROD=sperm membrane protein BS-63 /DB_XREF=gi:5809677 /UG=Hs.199179 RAN binding protein 2 /FL=gb:U64675.2 </td> <td> U64675 </td> <td> RANBP2-like and GRIP domain containing 3 /// RANBP2-like and GRIP domain containing 4 /// RANBP2-like and GRIP domain containing 5 /// RANBP2-like and GRIP domain containing 6 /// RANBP2-like and GRIP domain containing 8 </td> <td> RGPD3 /// RGPD4 /// RGPD5 /// RGPD6 /// RGPD8 </td> <td> 84220 /// 285190 /// 653489 /// 727851 /// 729540 </td> <td> NM_001037866 /// NM_001123363 /// NM_001144013 /// NM_001164463 /// NM_005054 /// NM_032260 /// NM_182588 /// XM_005263747 /// XM_005263748 /// XM_005263753 /// XM_005263755 /// XM_005263756 /// XM_005263819 /// XM_005263820 /// XM_005263821 /// XM_005263822 /// XM_006712454 /// XM_006712708 /// XM_006712794 </td> <td> 0000042 // protein targeting to Golgi // inferred from electronic annotation /// 0033132 // negative regulation of glucokinase activity // inferred from electronic annotation /// 0046907 // intracellular transport // inferred from electronic annotation /// 0090526 // regulation of gluconeogenesis involved in cellular glucose homeostasis // inferred from electronic annotation </td> <td> 0005643 // nuclear pore // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008536 // Ran GTPase binding // non-traceable author statement </td> <td> -35.43 </td> <td> 129.94 </td> <td> -4.15 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201697_s_at </td> <td> 201697_s_at </td> <td> NM_001379 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001379.1 /DEF=Homo sapiens DNA (cytosine-5-)-methyltransferase 1 (DNMT1), mRNA. /FEA=mRNA /GEN=DNMT1 /PROD=DNA (cytosine-5-)-methyltransferase 1 /DB_XREF=gi:4503350 /UG=Hs.77462 DNA (cytosine-5-)-methyltransferase 1 /FL=gb:NM_001379.1 </td> <td> NM_001379 </td> <td> DNA (cytosine-5-)-methyltransferase 1 </td> <td> DNMT1 </td> <td> 1786 </td> <td> NM_001130823 /// NM_001379 /// XM_006722681 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006306 // DNA methylation // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0010216 // maintenance of DNA methylation // inferred from direct assay /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0016458 // gene silencing // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from mutant phenotype /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0090116 // C-5 methylation of cytosine // inferred from electronic annotation </td> <td> 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005657 // replication fork // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008327 // methyl-CpG binding // inferred from electronic annotation /// 0009008 // DNA-methyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 68.00 </td> <td> 177.45 </td> <td> 4.15 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 207749_s_at </td> <td> 207749_s_at </td> <td> NM_002718 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002718.1 /DEF=Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 72), alpha isoform and (PR 130), beta isoform (PPP2R3), mRNA.  /FEA=mRNA /GEN=PPP2R3 /PROD=protein phosphatase 2 (formerly 2A), regulatorysubunit B (PR 72), alpha isoform and (PR 130), betaisoform /DB_XREF=gi:4506020 /UG=Hs.28219 protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 72), alpha isoform and (PR 130), beta isoform /FL=gb:L12146.1 gb:NM_002718.1 </td> <td> NM_002718 </td> <td> protein phosphatase 2, regulatory subunit B'', alpha </td> <td> PPP2R3A </td> <td> 5523 </td> <td> NM_001190447 /// NM_002718 /// NM_181897 /// XM_006713686 </td> <td> 0001754 // eye photoreceptor cell differentiation // inferred from genetic interaction /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0007525 // somatic muscle development // inferred from genetic interaction /// 0045732 // positive regulation of protein catabolic process // inferred from mutant phenotype /// 0050790 // regulation of catalytic activity // traceable author statement /// 0061053 // somite development // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from genetic interaction /// 0090244 // Wnt signaling pathway involved in somitogenesis // inferred by curator /// 0090249 // regulation of cell motility involved in somitogenic axis elongation // inferred from genetic interaction /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from direct assay </td> <td> 0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // inferred from sequence or structural similarity </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -46.95 </td> <td> 123.00 </td> <td> -4.15 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 213620_s_at </td> <td> 213620_s_at </td> <td> AA126728 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA126728 /FEA=EST /DB_XREF=gi:1686292 /DB_XREF=est:zk95d07.s1 /CLONE=IMAGE:490573 /UG=Hs.83733 intercellular adhesion molecule 2 </td> <td> AA126728 </td> <td> intercellular adhesion molecule 2 </td> <td> ICAM2 </td> <td> 3384 </td> <td> NM_000873 /// NM_001099786 /// NM_001099787 /// NM_001099788 /// NM_001099789 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0050776 // regulation of immune response // traceable author statement </td> <td> 0001931 // uropod // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071944 // cell periphery // inferred from electronic annotation </td> <td> 0005178 // integrin binding // inferred from physical interaction </td> <td> 463.17 </td> <td> 1910.54 </td> <td> 4.15 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204642_at </td> <td> 204642_at </td> <td> NM_001400 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001400.2 /DEF=Homo sapiens endothelial differentiation, sphingolipid G-protein-coupled receptor, 1 (EDG1), mRNA.  /FEA=mRNA /GEN=EDG1 /PROD=endothelial differentiation, sphingolipidG-protein-coupled receptor, 1 /DB_XREF=gi:13027635 /UG=Hs.154210 endothelial differentiation, sphingolipid G-protein-coupled receptor, 1 /FL=gb:NM_001400.2 gb:M31210.1 gb:AF233365.1 </td> <td> NM_001400 </td> <td> sphingosine-1-phosphate receptor 1 </td> <td> S1PR1 </td> <td> 1901 </td> <td> NM_001400 /// XM_006710399 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001955 // blood vessel maturation // inferred from sequence or structural similarity /// 0003245 // cardiac muscle tissue growth involved in heart morphogenesis // inferred from sequence or structural similarity /// 0003376 // sphingosine-1-phosphate signaling pathway // inferred from direct assay /// 0006935 // chemotaxis // inferred from sequence or structural similarity /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016477 // cell migration // inferred from sequence or structural similarity /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from sequence or structural similarity /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030500 // regulation of bone mineralization // inferred from sequence or structural similarity /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0045124 // regulation of bone resorption // inferred from sequence or structural similarity /// 0045446 // endothelial cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050927 // positive regulation of positive chemotaxis // inferred from electronic annotation /// 0051482 // positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0051497 // negative regulation of stress fiber assembly // inferred from electronic annotation /// 0061384 // heart trabecula morphogenesis // inferred from sequence or structural similarity /// 0072678 // T cell migration // inferred from sequence or structural similarity </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031226 // intrinsic component of plasma membrane // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation </td> <td> 0001664 // G-protein coupled receptor binding // inferred from physical interaction /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0038036 // sphingosine-1-phosphate receptor activity // inferred from direct assay /// 0046625 // sphingolipid binding // inferred from electronic annotation </td> <td> -158.37 </td> <td> 442.36 </td> <td> -4.15 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201094_at </td> <td> 201094_at </td> <td> NM_001032 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001032.1 /DEF=Homo sapiens ribosomal protein S29 (RPS29), mRNA. /FEA=mRNA /GEN=RPS29 /PROD=ribosomal protein S29 /DB_XREF=gi:4506716 /UG=Hs.539 ribosomal protein S29 /FL=gb:L31610.1 gb:NM_001032.1 gb:U14973.1 </td> <td> NM_001032 </td> <td> ribosomal protein S29 </td> <td> RPS29 </td> <td> 6235 </td> <td> NM_001030001 /// NM_001032 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -554.80 </td> <td> 2829.65 </td> <td> -4.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218028_at </td> <td> 218028_at </td> <td> NM_016031 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016031.1 /DEF=Homo sapiens elongation of very long chain fatty acids (FEN1Elo2, SUR4Elo3, yeast)-like 1 (ELOVL1), mRNA.  /FEA=mRNA /GEN=ELOVL1 /PROD=elongation of very long chain fatty acids(FEN1Elo2, SUR4Elo3, yeast)-like 1 /DB_XREF=gi:7705798 /UG=Hs.25597 elongation of very long chain fatty acids (FEN1Elo2, SUR4Elo3, yeast)-like 1 /FL=gb:BC000618.1 gb:NM_022821.1 gb:AF151846.1 gb:NM_016031.1 </td> <td> NM_016031 </td> <td> ELOVL fatty acid elongase 1 /// microRNA 6734 </td> <td> ELOVL1 /// MIR6734 </td> <td> 64834 /// 102466723 </td> <td> NM_001256399 /// NM_001256401 /// NM_001256402 /// NM_022821 /// NR_046117 /// NR_106792 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from direct assay /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from mutant phenotype /// 0034625 // fatty acid elongation, monounsaturated fatty acid // inferred from direct assay /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042761 // very long-chain fatty acid biosynthetic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0009922 // fatty acid elongase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 70.53 </td> <td> 156.99 </td> <td> 4.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209340_at </td> <td> 209340_at </td> <td> S73498 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:S73498.1 /DEF=Homo sapiens AgX-1 antigen mRNA, complete cds. /FEA=mRNA /PROD=AgX-1 antigen /DB_XREF=gi:688010 /UG=Hs.21293 UDP-N-acteylglucosamine pyrophosphorylase 1 /FL=gb:AB011004.1 gb:NM_003115.1 gb:S73498.1 </td> <td> S73498 </td> <td> UDP-N-acteylglucosamine pyrophosphorylase 1 </td> <td> UAP1 </td> <td> 6675 </td> <td> NM_003115 /// XM_005245462 /// XM_005245465 </td> <td> 0006047 // UDP-N-acetylglucosamine metabolic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0003977 // UDP-N-acetylglucosamine diphosphorylase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> 133.65 </td> <td> 366.65 </td> <td> 4.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 40489_at </td> <td> 40489_at </td> <td> D31840 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. D31840:Human DRPLA mRNA for ORF, complete cds /cds=(238,3795) /gb=D31840 /gi=862329 /ug=Hs.169488 /len=4279 </td> <td> D31840 </td> <td> atrophin 1 </td> <td> ATN1 </td> <td> 1822 </td> <td> NM_001007026 /// NM_001940 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0009404 // toxin metabolic process // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0030011 // maintenance of cell polarity // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0016363 // nuclear matrix // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0050827 // toxin receptor binding // inferred from electronic annotation </td> <td> 51.20 </td> <td> 115.30 </td> <td> 4.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 221647_s_at </td> <td> 221647_s_at </td> <td> AL136935 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136935.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586O0222 (from clone DKFZp586O0222); complete cds.  /FEA=mRNA /GEN=DKFZp586O0222 /PROD=hypothetical protein /DB_XREF=gi:12053364 /UG=Hs.7393 hypothetical protein from EUROIMAGE 1987170 /FL=gb:AL136935.1 </td> <td> AL136935 </td> <td> microRNA 6743 /// RIC8 guanine nucleotide exchange factor A </td> <td> MIR6743 /// RIC8A </td> <td> 60626 /// 102465445 </td> <td> NM_001286134 /// NM_021932 /// NR_106801 /// XM_005253052 /// XM_006718270 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0042074 // cell migration involved in gastrulation // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0070586 // cell-cell adhesion involved in gastrulation // inferred from electronic annotation /// 0071711 // basement membrane organization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 103.87 </td> <td> 260.76 </td> <td> 4.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202075_s_at </td> <td> 202075_s_at </td> <td> NM_006227 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006227.1 /DEF=Homo sapiens phospholipid transfer protein (PLTP), mRNA. /FEA=mRNA /GEN=PLTP /PROD=phospholipid transfer protein /DB_XREF=gi:5453913 /UG=Hs.283007 phospholipid transfer protein /FL=gb:L26232.1 gb:NM_006227.1 </td> <td> NM_006227 </td> <td> phospholipid transfer protein </td> <td> PLTP </td> <td> 5360 </td> <td> NM_001242920 /// NM_001242921 /// NM_006227 /// NM_182676 /// XM_005260439 </td> <td> 0006629 // lipid metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0010189 // vitamin E biosynthetic process // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay </td> <td> 0008289 // lipid binding // inferred from electronic annotation </td> <td> -66.47 </td> <td> 161.54 </td> <td> -4.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204153_s_at </td> <td> 204153_s_at </td> <td> NM_002405 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002405.1 /DEF=Homo sapiens manic fringe (Drosophila) homolog (MFNG), mRNA. /FEA=mRNA /GEN=MFNG /PROD=manic fringe (Drosophila) homolog /DB_XREF=gi:4505158 /UG=Hs.31939 manic fringe (Drosophila) homolog /FL=gb:U94352.1 gb:NM_002405.1 </td> <td> NM_002405 </td> <td> MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase </td> <td> MFNG </td> <td> 4242 </td> <td> NM_001166343 /// NM_002405 /// NR_029413 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030173 // integral component of Golgi membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0033829 // O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 86.45 </td> <td> 363.07 </td> <td> 4.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201668_x_at </td> <td> 201668_x_at </td> <td> AW163148 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW163148 /FEA=EST /DB_XREF=gi:6302181 /DB_XREF=est:au92d06.y1 /CLONE=IMAGE:2783723 /UG=Hs.75607 myristoylated alanine-rich protein kinase C substrate (MARCKS, 80K-L) /FL=gb:NM_002356.4 gb:M68956.1 gb:D10522.1 </td> <td> AW163148 </td> <td> myristoylated alanine-rich protein kinase C substrate </td> <td> MARCKS </td> <td> 4082 </td> <td> NM_002356 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0042585 // germinal vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0051015 // actin filament binding // traceable author statement </td> <td> -236.70 </td> <td> 437.10 </td> <td> -4.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209627_s_at </td> <td> 209627_s_at </td> <td> AY008372 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AY008372.1 /DEF=Homo sapiens oxysterol binding protein-related protein 3 (ORP3) mRNA, complete cds.  /FEA=mRNA /GEN=ORP3 /PROD=oxysterol binding protein-related protein 3 /DB_XREF=gi:10880972 /UG=Hs.197955 KIAA0704 protein /FL=gb:AY008372.1 </td> <td> AY008372 </td> <td> oxysterol binding protein-like 3 </td> <td> OSBPL3 </td> <td> 26031 </td> <td> NM_015550 /// NM_145320 /// NM_145321 /// NM_145322 /// NM_145323 /// NM_145324 /// NR_104111 /// NR_104112 /// XM_005249698 /// XM_006715681 /// XM_006715682 /// XM_006715683 /// XM_006715684 /// XR_428073 /// XR_428074 /// XR_428075 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation </td> <td> 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0097038 // perinuclear endoplasmic reticulum // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from direct assay </td> <td> 43.35 </td> <td> 67.75 </td> <td> 4.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217726_at </td> <td> 217726_at </td> <td> NM_016057 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016057.1 /DEF=Homo sapiens CGI-120 protein (LOC51644), mRNA. /FEA=mRNA /GEN=LOC51644 /PROD=CGI-120 protein /DB_XREF=gi:7706336 /UG=Hs.181271 CGI-120 protein /FL=gb:AB047848.1 gb:BC002849.1 gb:AF151878.1 gb:AF161529.1 gb:NM_016057.1 </td> <td> NM_016057 </td> <td> coatomer protein complex, subunit zeta 1 </td> <td> COPZ1 </td> <td> 22818 </td> <td> NM_001271734 /// NM_001271735 /// NM_001271736 /// NM_016057 /// NR_073424 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from direct assay /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from direct assay /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td>  </td> <td> 98.05 </td> <td> 344.93 </td> <td> 4.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 213570_at </td> <td> 213570_at </td> <td> BF516289 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF516289 /FEA=EST /DB_XREF=gi:11601468 /DB_XREF=est:UI-H-BW1-anz-d-07-0-UI.s1 /CLONE=IMAGE:3083964 /UG=Hs.19122 eukaryotic translation initiation factor 4E-like 3 </td> <td> BF516289 </td> <td> eukaryotic translation initiation factor 4E family member 2 </td> <td> EIF4E2 </td> <td> 9470 </td> <td> NM_001276336 /// NM_001276337 /// NM_001282958 /// NM_004846 /// XM_005246975 /// XR_427124 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019221 // cytokine-mediated signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from direct assay </td> <td> 0000339 // RNA cap binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 35.35 </td> <td> 29.32 </td> <td> 4.14 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218172_s_at </td> <td> 218172_s_at </td> <td> NM_018630 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018630.1 /DEF=Homo sapiens hypothetical protein PRO2577 (PRO2577), mRNA. /FEA=mRNA /GEN=PRO2577 /PROD=hypothetical protein PRO2577 /DB_XREF=gi:8924181 /UG=Hs.241576 hypothetical protein PRO2577 /FL=gb:AF116708.1 gb:NM_018630.1 </td> <td> NM_018630 </td> <td> derlin 1 </td> <td> DERL1 </td> <td> 79139 </td> <td> NM_001134671 /// NM_024295 /// XM_006716657 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019060 // intracellular transport of viral protein in host cell // traceable author statement /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from direct assay /// 0030970 // retrograde protein transport, ER to cytosol // inferred from direct assay /// 0030970 // retrograde protein transport, ER to cytosol // inferred from mutant phenotype /// 0034620 // cellular response to unfolded protein // inferred from electronic annotation /// 0045184 // establishment of protein localization // traceable author statement </td> <td> 0000836 // Hrd1p ubiquitin ligase complex // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from mutant phenotype /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay </td> <td> 0004872 // receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042288 // MHC class I protein binding // inferred from direct assay </td> <td> 45.60 </td> <td> 76.85 </td> <td> 4.13 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217981_s_at </td> <td> 217981_s_at </td> <td> NM_012192 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012192.1 /DEF=Homo sapiens fracture callus 1 (rat) homolog (FXC1), mRNA. /FEA=mRNA /GEN=FXC1 /PROD=fracture callus 1 (rat) homolog /DB_XREF=gi:6912381 /UG=Hs.54943 fracture callus 1 (rat) homolog /FL=gb:AF150105.1 gb:AF152355.1 gb:NM_012192.1 gb:AF183415.1 </td> <td> NM_012192 </td> <td> translocase of inner mitochondrial membrane 10 homolog B (yeast) </td> <td> TIMM10B </td> <td> 26515 </td> <td> NM_012192 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0042719 // mitochondrial intermembrane space protein transporter complex // inferred from direct assay </td> <td> 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 42.03 </td> <td> 50.01 </td> <td> 4.13 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218240_at </td> <td> 218240_at </td> <td> NM_017595 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017595.1 /DEF=Homo sapiens I-kappa-B-interacting Ras-like protein 2 (KBRAS2), mRNA.  /FEA=mRNA /GEN=KBRAS2 /PROD=I-kappa-B-interacting Ras-like protein 2 /DB_XREF=gi:8922150 /UG=Hs.22937 I-kappa-B-interacting Ras-like protein 2 /FL=gb:NM_017595.1 </td> <td> NM_017595 </td> <td> NFKB inhibitor interacting Ras-like 2 </td> <td> NKIRAS2 </td> <td> 28511 </td> <td> NM_001001349 /// NM_001144927 /// NM_001144928 /// NM_001144929 /// NM_017595 /// XM_005257251 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB signaling // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 36.97 </td> <td> 86.16 </td> <td> 4.13 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209492_x_at </td> <td> 209492_x_at </td> <td> BC003679 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003679.1 /DEF=Homo sapiens, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit e, clone MGC:12532, mRNA, complete cds.  /FEA=mRNA /PROD=ATP synthase, H+ transporting, mitochondrial F0complex, subunit e /DB_XREF=gi:13277543 /UG=Hs.85539 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit e /FL=gb:BC003679.1 </td> <td> BC003679 </td> <td> ATP synthase, H+ transporting, mitochondrial Fo complex, subunit E </td> <td> ATP5I </td> <td> 521 </td> <td> NM_007100 /// NR_033743 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation </td> <td> 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation </td> <td> 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator </td> <td> 103.90 </td> <td> 413.98 </td> <td> 4.13 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209702_at </td> <td> 209702_at </td> <td> U79260 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U79260.1 /DEF=Human clone 23745 mRNA, complete cds. /FEA=mRNA /PROD=unknown /DB_XREF=gi:1710215 /UG=Hs.284741 hypothetical protein MGC5149 /FL=gb:BC001284.1 gb:U79260.1 </td> <td> U79260 </td> <td> fat mass and obesity associated </td> <td> FTO </td> <td> 79068 </td> <td> NM_001080432 </td> <td> 0001659 // temperature homeostasis // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006307 // DNA dealkylation involved in DNA repair // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0010883 // regulation of lipid storage // inferred from electronic annotation /// 0035552 // oxidative single-stranded DNA demethylation // inferred from direct assay /// 0035553 // oxidative single-stranded RNA demethylation // inferred from direct assay /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0042245 // RNA repair // inferred from direct assay /// 0044065 // regulation of respiratory system process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0070350 // regulation of white fat cell proliferation // inferred from electronic annotation /// 0070989 // oxidative demethylation // inferred from direct assay /// 0080111 // DNA demethylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0008198 // ferrous iron binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0035515 // oxidative RNA demethylase activity // inferred from direct assay /// 0035516 // oxidative DNA demethylase activity // inferred from direct assay /// 0043734 // DNA-N1-methyladenine dioxygenase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> 65.65 </td> <td> 130.30 </td> <td> 4.13 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204132_s_at </td> <td> 204132_s_at </td> <td> NM_001455 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001455.1 /DEF=Homo sapiens forkhead box O3A (FOXO3A), mRNA. /FEA=mRNA /GEN=FOXO3A /PROD=forkhead box O3A /DB_XREF=gi:4503738 /UG=Hs.14845 forkhead box O3A /FL=gb:AF032886.1 gb:NM_001455.1 </td> <td> NM_001455 </td> <td> forkhead box O3 /// forkhead box O3B pseudogene </td> <td> FOXO3 /// FOXO3B </td> <td> 2309 /// 2310 </td> <td> NM_001455 /// NM_201559 /// NR_026718 /// XM_005266867 /// XM_005266868 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001544 // initiation of primordial ovarian follicle growth // inferred from electronic annotation /// 0001547 // antral ovarian follicle growth // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006417 // regulation of translation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // not recorded /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007389 // pattern specification process // not recorded /// 0008286 // insulin receptor signaling pathway // not recorded /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009790 // embryo development //  /// 0009888 // tissue development // not recorded /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from sequence or structural similarity /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // not recorded /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045648 // positive regulation of erythrocyte differentiation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // not recorded /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0001047 // core promoter binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008301 // DNA binding, bending // not recorded /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031490 // chromatin DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from direct assay </td> <td> -39.67 </td> <td> 57.21 </td> <td> -4.13 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204597_x_at </td> <td> 204597_x_at </td> <td> NM_003155 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003155.1 /DEF=Homo sapiens stanniocalcin 1 (STC1), mRNA. /FEA=mRNA /GEN=STC1 /PROD=stanniocalcin 1 /DB_XREF=gi:4507264 /UG=Hs.25590 stanniocalcin 1 /FL=gb:U46768.1 gb:U25997.1 gb:NM_003155.1 </td> <td> NM_003155 </td> <td> stanniocalcin 1 </td> <td> STC1 </td> <td> 6781 </td> <td> NM_003155 </td> <td> 0001503 // ossification // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007584 // response to nutrient // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation </td> <td> 0005179 // hormone activity // inferred from electronic annotation </td> <td> -39.60 </td> <td> 40.80 </td> <td> -4.13 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201961_s_at </td> <td> 201961_s_at </td> <td> AL583171 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL583171 /FEA=EST /DB_XREF=gi:12951876 /DB_XREF=est:AL583171 /CLONE=CS0DL009YA21 (3 prime) /UG=Hs.153639 hypothetical SBBI03 protein /FL=gb:AF077599.1 gb:NM_005785.1 </td> <td> AL583171 </td> <td> ring finger protein 41, E3 ubiquitin protein ligase </td> <td> RNF41 </td> <td> 10193 </td> <td> NM_001242826 /// NM_005785 /// NM_194358 /// NM_194359 /// NR_040053 /// XM_005268561 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0043408 // regulation of MAPK cascade // inferred from direct assay /// 0045619 // regulation of lymphocyte differentiation // inferred from electronic annotation /// 0045637 // regulation of myeloid cell differentiation // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0051896 // regulation of protein kinase B signaling // inferred from direct assay /// 0097191 // extrinsic apoptotic signaling pathway // inferred from direct assay /// 2000377 // regulation of reactive oxygen species metabolic process // inferred from mutant phenotype </td> <td> 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005128 // erythropoietin receptor binding // inferred from electronic annotation /// 0005135 // interleukin-3 receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0031386 // protein tag // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -46.33 </td> <td> 65.94 </td> <td> -4.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 211769_x_at </td> <td> 211769_x_at </td> <td> BC006088 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006088.1 /DEF=Homo sapiens, tumor differentially expressed 1, clone MGC:12658, mRNA, complete cds.  /FEA=mRNA /PROD=tumor differentially expressed 1 /DB_XREF=gi:13543883 /FL=gb:BC006088.1 </td> <td> BC006088 </td> <td> serine incorporator 3 </td> <td> SERINC3 </td> <td> 10955 </td> <td> NM_006811 /// NM_198941 </td> <td> 1902237 // positive regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -197.75 </td> <td> 394.15 </td> <td> -4.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202808_at </td> <td> 202808_at </td> <td> AK000161 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK000161.1 /DEF=Homo sapiens cDNA FLJ20154 fis, clone COL08740. /FEA=mRNA /DB_XREF=gi:7020067 /UG=Hs.10346 hypothetical protein FLJ20154 /FL=gb:NM_017787.1 </td> <td> AK000161 </td> <td> WW domain binding protein 1-like </td> <td> WBP1L </td> <td> 54838 </td> <td> NM_001083913 /// NM_017787 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -102.98 </td> <td> 337.71 </td> <td> -4.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 213637_at </td> <td> 213637_at </td> <td> BE503392 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE503392 /FEA=EST /DB_XREF=gi:9705800 /DB_XREF=est:7a17e04.x1 /CLONE=IMAGE:3219006 /UG=Hs.145020 ESTs, Weakly similar to KIAA1205 protein H.sapiens </td> <td> BE503392 </td> <td> DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 </td> <td> DDX52 </td> <td> 11056 </td> <td> NM_001291476 /// NM_007010 /// NM_152300 /// XM_006721650 /// XM_006725299 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 45.90 </td> <td> 81.28 </td> <td> 4.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204042_at </td> <td> 204042_at </td> <td> AB020707 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB020707.1 /DEF=Homo sapiens mRNA for KIAA0900 protein, partial cds. /FEA=mRNA /GEN=KIAA0900 /PROD=KIAA0900 protein /DB_XREF=gi:4240288 /UG=Hs.82318 WAS protein family, member 3 /FL=gb:NM_006646.2 gb:AB026543.1 </td> <td> AB020707 </td> <td> WAS protein family, member 3 </td> <td> WASF3 </td> <td> 10810 </td> <td> NM_001291965 /// NM_006646 /// XM_005266239 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030041 // actin filament polymerization // traceable author statement /// 0031643 // positive regulation of myelination // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation </td> <td> 61.47 </td> <td> 191.44 </td> <td> 4.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 208905_at </td> <td> 208905_at </td> <td> BC005299 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005299.1 /DEF=Homo sapiens, cytochrome c, clone MGC:12367, mRNA, complete cds. /FEA=mRNA /PROD=cytochrome c /DB_XREF=gi:13529022 /UG=Hs.169248 cytochrome c /FL=gb:NM_018947.1 gb:BC005299.1 </td> <td> BC005299 </td> <td> cytochrome c, somatic </td> <td> CYCS </td> <td> 54205 </td> <td> NM_018947 </td> <td> 0006309 // apoptotic DNA fragmentation // inferred from mutant phenotype /// 0006915 // apoptotic process // traceable author statement /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // traceable author statement /// 0016311 // dephosphorylation // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045333 // cellular respiration // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement </td> <td> 0000159 // protein phosphatase type 2A complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0005829 // cytosol // inferred from mutant phenotype /// 0005829 // cytosol // traceable author statement /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0020037 // heme binding // traceable author statement /// 0045155 // electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 280.40 </td> <td> 1206.95 </td> <td> 4.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204078_at </td> <td> 204078_at </td> <td> NM_006455 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006455.1 /DEF=Homo sapiens nucleolar autoantigen (55kD) similar to rat synaptonemal complex protein (SC65), mRNA.  /FEA=mRNA /GEN=SC65 /PROD=nucleolar autoantigen (55kD) similar to ratsynaptonemal complex protein /DB_XREF=gi:5454037 /UG=Hs.207251 nucleolar autoantigen (55kD) similar to rat synaptonemal complex protein /FL=gb:BC001047.1 gb:U47621.1 gb:NM_006455.1 </td> <td> NM_006455 </td> <td> leprecan-like 4 </td> <td> LEPREL4 </td> <td> 10609 </td> <td> NM_006455 /// XM_005256952 /// XM_005256953 /// XM_006721640 </td> <td> 0007130 // synaptonemal complex assembly // traceable author statement </td> <td> 0000794 // condensed nuclear chromosome // traceable author statement /// 0000795 // synaptonemal complex // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation </td> <td>  </td> <td> 33.90 </td> <td> 41.52 </td> <td> 4.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202919_at </td> <td> 202919_at </td> <td> NM_015387 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015387.1 /DEF=Homo sapiens DKFZP564M112 protein (DKFZP564M112), mRNA. /FEA=mRNA /GEN=DKFZP564M112 /PROD=DKFZP564M112 protein /DB_XREF=gi:7661623 /UG=Hs.107942 DKFZP564M112 protein /FL=gb:AB015441.1 gb:BC005237.1 gb:AF151853.1 gb:AL080070.1 gb:NM_015387.1 </td> <td> NM_015387 </td> <td> MOB family member 4, phocein </td> <td> MOB4 </td> <td> 25843 </td> <td> NM_001100819 /// NM_001204094 /// NM_015387 /// NM_199482 </td> <td> 0006457 // protein folding // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 102.07 </td> <td> 223.31 </td> <td> 4.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209444_at </td> <td> 209444_at </td> <td> BC001851 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001851.1 /DEF=Homo sapiens, Similar to RAP1, GTP-GDP dissociation stimulator 1, clone MGC:4525, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to RAP1, GTP-GDP dissociation stimulator1 /DB_XREF=gi:12804812 /UG=Hs.7940 RAP1, GTP-GDP dissociation stimulator 1 /FL=gb:NM_021159.1 gb:BC001851.1 gb:BC001816.1 gb:AF215923.1 gb:AF237413.1 </td> <td> BC001851 </td> <td> RAP1, GTP-GDP dissociation stimulator 1 </td> <td> RAP1GDS1 </td> <td> 5910 </td> <td> NM_001100426 /// NM_001100427 /// NM_001100428 /// NM_001100429 /// NM_001100430 /// NM_021159 /// XM_006714284 /// XM_006714285 </td> <td> 0014829 // vascular smooth muscle contraction // inferred from electronic annotation /// 0031034 // myosin filament assembly // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032471 // negative regulation of endoplasmic reticulum calcium ion concentration // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // non-traceable author statement /// 0051561 // positive regulation of mitochondrial calcium ion concentration // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005096 // GTPase activator activity // non-traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -43.15 </td> <td> 190.85 </td> <td> -4.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203531_at </td> <td> 203531_at </td> <td> BF435809 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF435809 /FEA=EST /DB_XREF=gi:11448124 /DB_XREF=est:nab42a09.x1 /CLONE=IMAGE:3268504 /UG=Hs.101299 cullin 5 /FL=gb:AF327710.1 gb:AF017061.1 gb:NM_003478.1 </td> <td> BF435809 </td> <td> cullin 5 </td> <td> CUL5 </td> <td> 8065 </td> <td> NM_003478 /// XM_005271682 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0051480 // cytosolic calcium ion homeostasis // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from electronic annotation /// 0031466 // Cul5-RING ubiquitin ligase complex // inferred from direct assay </td> <td> 0004872 // receptor activity // traceable author statement /// 0005262 // calcium channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay </td> <td> 57.35 </td> <td> 183.30 </td> <td> 4.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212160_at </td> <td> 212160_at </td> <td> AI984005 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI984005 /FEA=EST /DB_XREF=gi:5811224 /DB_XREF=est:wt52c06.x1 /CLONE=IMAGE:2511082 /UG=Hs.85951 exportin, tRNA (nuclear export receptor for tRNAs) /FL=gb:AF039022.1 gb:NM_007235.2 </td> <td> AI984005 </td> <td> exportin, tRNA </td> <td> XPOT </td> <td> 11260 </td> <td> NM_007235 </td> <td> 0006409 // tRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005643 // nuclear pore // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000049 // tRNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0008536 // Ran GTPase binding // inferred from electronic annotation </td> <td> -128.80 </td> <td> 259.05 </td> <td> -4.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 210786_s_at </td> <td> 210786_s_at </td> <td> M93255 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M93255.1 /DEF=Human FLI-1 mRNA, complete cds for two alternate splicings. /FEA=mRNA /GEN=FLI-1; FLI-1 /PROD=FLI-1 /DB_XREF=gi:182659 /UG=Hs.108043 Friend leukemia virus integration 1 /FL=gb:M93255.1 </td> <td> M93255 </td> <td> Fli-1 proto-oncogene, ETS transcription factor </td> <td> FLI1 </td> <td> 2313 </td> <td> NM_001167681 /// NM_001271010 /// NM_001271012 /// NM_002017 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0007599 // hemostasis // traceable author statement /// 0008015 // blood circulation // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0030154 // cell differentiation // not recorded /// 0035855 // megakaryocyte development // inferred from electronic annotation </td> <td> 0005634 // nucleus // not recorded </td> <td> 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0003677 // DNA binding // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -143.12 </td> <td> 278.96 </td> <td> -4.12 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201180_s_at </td> <td> 201180_s_at </td> <td> J03198 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:J03198.1 /DEF=Human stimulatory G protein (of receptor-regulated K+ channels) alpha subunit mRNA, complete cds.  /FEA=mRNA /DB_XREF=gi:183224 /UG=Hs.73799 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 /FL=gb:J03005.1 gb:J03198.1 gb:M27543.1 gb:J03238.1 gb:NM_006496.1 </td> <td> J03198 </td> <td> guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 </td> <td> GNAI3 </td> <td> 2773 </td> <td> NM_006496 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement /// 0006906 // vesicle fusion // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway //  /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007194 // negative regulation of adenylate cyclase activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0051301 // cell division // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // not recorded /// 0042588 // zymogen granule // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0004871 // signal transducer activity // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031821 // G-protein coupled serotonin receptor binding // not recorded /// 0032794 // GTPase activating protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -127.65 </td> <td> 814.65 </td> <td> -4.11 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217099_s_at </td> <td> 217099_s_at </td> <td> AF258545 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF258545 /DEF=Homo sapiens chormosome 17, HC90, HC71AC, HC6 and HC56 genes, complete sequence /FEA=CDS /DB_XREF=gi:10945429 /UG=Hs.19614 gemin4 </td> <td> AF258545 </td> <td> gem (nuclear organelle) associated protein 4 </td> <td> GEMIN4 </td> <td> 50628 </td> <td> NM_015721 /// XM_005256667 /// XM_005256668 /// XM_005256670 </td> <td> 0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0006364 // rRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0015030 // Cajal body // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement /// 0032797 // SMN complex // inferred from direct assay /// 0034719 // SMN-Sm protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097504 // Gemini of coiled bodies // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 45.12 </td> <td> 104.76 </td> <td> 4.11 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202194_at </td> <td> 202194_at </td> <td> AL117354 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL117354 /DEF=Human DNA sequence from clone RP5-976O13 on chromosome 1p21.2-22.2 Contains part of the gene for CGI-100 protein, 3 isoforms of the gene for M96 protein, ESTs, STSs, GSSs and a CpG Island /FEA=mRNA_1 /DB_XREF=gi:6822199 /UG=Hs.296155 CGI-100 protein /FL=gb:AF151858.1 gb:NM_016040.1 </td> <td> AL117354 </td> <td> transmembrane emp24 protein transport domain containing 5 </td> <td> TMED5 </td> <td> 50999 </td> <td> NM_001167830 /// NM_016040 /// NR_030761 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0090161 // Golgi ribbon formation // inferred from mutant phenotype </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0070971 // endoplasmic reticulum exit site // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 78.22 </td> <td> 258.86 </td> <td> 4.11 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212561_at </td> <td> 212561_at </td> <td> AA349595 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA349595 /FEA=EST /DB_XREF=gi:2001934 /DB_XREF=est:EST56429 /UG=Hs.26797 KIAA1091 protein </td> <td> AA349595 </td> <td> DENN/MADD domain containing 5A </td> <td> DENND5A </td> <td> 23258 </td> <td> NM_001243254 /// NM_015213 /// XM_005252832 /// XM_006718169 /// XR_242782 </td> <td> 0032313 // regulation of Rab GTPase activity // inferred from direct assay /// 0032851 // positive regulation of Rab GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0050982 // detection of mechanical stimulus // not recorded </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // not recorded </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005262 // calcium channel activity // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0017112 // Rab guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0017137 // Rab GTPase binding // inferred from electronic annotation </td> <td> -305.80 </td> <td> 522.38 </td> <td> -4.11 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 222105_s_at </td> <td> 222105_s_at </td> <td> AA452565 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA452565 /FEA=EST /DB_XREF=gi:2166234 /DB_XREF=est:zx35g11.s1 /CLONE=IMAGE:788516 /UG=Hs.22937 I-kappa-B-interacting Ras-like protein 2 /FL=gb:AF229840.1 </td> <td> AA452565 </td> <td> NFKB inhibitor interacting Ras-like 2 </td> <td> NKIRAS2 </td> <td> 28511 </td> <td> NM_001001349 /// NM_001144927 /// NM_001144928 /// NM_001144929 /// NM_017595 /// XM_005257251 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB signaling // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 45.67 </td> <td> 83.51 </td> <td> 4.11 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204568_at </td> <td> 204568_at </td> <td> NM_014924 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014924.1 /DEF=Homo sapiens KIAA0831 protein (KIAA0831), mRNA. /FEA=mRNA /GEN=KIAA0831 /PROD=KIAA0831 protein /DB_XREF=gi:7662325 /UG=Hs.103000 KIAA0831 protein /FL=gb:AB020638.1 gb:NM_014924.1 </td> <td> NM_014924 </td> <td> autophagy related 14 </td> <td> ATG14 </td> <td> 22863 </td> <td> NM_014924 </td> <td> 0000045 // autophagic vacuole assembly // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation /// 0010508 // positive regulation of autophagy // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005930 // axoneme // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -40.87 </td> <td> 92.46 </td> <td> -4.11 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 200616_s_at </td> <td> 200616_s_at </td> <td> BC000371 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000371.1 /DEF=Homo sapiens, KIAA0152 gene product, clone MGC:8341, mRNA, complete cds.  /FEA=mRNA /PROD=KIAA0152 gene product /DB_XREF=gi:12653206 /UG=Hs.181418 KIAA0152 gene product /FL=gb:BC000371.1 gb:D63486.1 gb:NM_014730.1 </td> <td> BC000371 </td> <td> malectin </td> <td> MLEC </td> <td> 9761 </td> <td> NM_014730 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0019899 // enzyme binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from sequence or structural similarity </td> <td> 78.75 </td> <td> 168.95 </td> <td> 4.11 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209256_s_at </td> <td> 209256_s_at </td> <td> AF277177 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF277177.1 /DEF=Homo sapiens PNAS-119 mRNA, complete cds. /FEA=mRNA /PROD=PNAS-119 /DB_XREF=gi:12751084 /UG=Hs.192966 KIAA0265 protein /FL=gb:AF277177.1 </td> <td> AF277177 </td> <td> kelch domain containing 10 </td> <td> KLHDC10 </td> <td> 23008 </td> <td> NM_014997 /// XM_005250233 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 45.27 </td> <td> 42.74 </td> <td> 4.11 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209817_at </td> <td> 209817_at </td> <td> M29550 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M29550.1 /DEF=Human calcineurin A1 mRNA, complete cds. /FEA=mRNA /DB_XREF=gi:180706 /UG=Hs.272458 protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (calcineurin A alpha) /FL=gb:M29550.1 </td> <td> M29550 </td> <td> protein phosphatase 3, catalytic subunit, beta isozyme </td> <td> PPP3CB </td> <td> 5532 </td> <td> NM_001142353 /// NM_001142354 /// NM_001289968 /// NM_001289969 /// NM_021132 /// XM_005269944 /// XM_005269945 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0001915 // negative regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007612 // learning // traceable author statement /// 0007613 // memory // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0014883 // transition between fast and slow fiber // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // inferred from sequence or structural similarity /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0033173 // calcineurin-NFAT signaling cascade // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0035176 // social behavior // inferred from expression pattern /// 0035690 // cellular response to drug // inferred from direct assay /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042098 // T cell proliferation // non-traceable author statement /// 0042110 // T cell activation // traceable author statement /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // traceable author statement /// 0048675 // axon extension // traceable author statement /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from sequence or structural similarity /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005955 // calcineurin complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // non-traceable author statement /// 0004723 // calcium-dependent protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // non-traceable author statement /// 0008144 // drug binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from direct assay /// 0030346 // protein phosphatase 2B binding // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from sequence or structural similarity /// 0033192 // calmodulin-dependent protein phosphatase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from physical interaction </td> <td> 49.83 </td> <td> 95.59 </td> <td> 4.10 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202816_s_at </td> <td> 202816_s_at </td> <td> AW292882 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW292882 /FEA=EST /DB_XREF=gi:6699518 /DB_XREF=est:UI-H-BW0-aif-g-06-0-UI.s1 /CLONE=IMAGE:2729267 /UG=Hs.153221 synovial sarcoma, translocated to X chromosome /FL=gb:NM_005637.1 </td> <td> AW292882 </td> <td> synovial sarcoma translocation, chromosome 18 </td> <td> SS18 </td> <td> 6760 </td> <td> NM_001007559 /// NM_005637 /// XM_005258334 /// XM_006722527 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay </td> <td> -41.60 </td> <td> 103.75 </td> <td> -4.10 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 214700_x_at </td> <td> 214700_x_at </td> <td> AK000323 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK000323.1 /DEF=Homo sapiens cDNA FLJ20316 fis, clone HEP07903, highly similar to U79263 Human clone 23760 mRNA.  /FEA=mRNA /DB_XREF=gi:7020332 /UG=Hs.225841 DKFZP434D193 protein </td> <td> AK000323 </td> <td> uncharacterized LOC101929336 /// replication timing regulatory factor 1 </td> <td> LOC101929336 /// RIF1 </td> <td> 55183 /// 101929336 </td> <td> NM_001177663 /// NM_001177664 /// NM_001177665 /// NM_018151 /// XM_005246665 /// XM_006712609 /// XM_006712610 /// XM_006712611 /// XR_241332 /// XR_251199 </td> <td> 0000077 // DNA damage checkpoint // inferred from electronic annotation /// 0000723 // telomere maintenance // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from electronic annotation </td> <td> 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0001939 // female pronucleus // inferred from electronic annotation /// 0001940 // male pronucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -39.83 </td> <td> 73.49 </td> <td> -4.10 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218020_s_at </td> <td> 218020_s_at </td> <td> NM_021943 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021943.1 /DEF=Homo sapiens hypothetical protein FLJ13222 (FLJ13222), mRNA. /FEA=mRNA /GEN=FLJ13222 /PROD=hypothetical protein FLJ13222 /DB_XREF=gi:11345483 /UG=Hs.6120 hypothetical protein FLJ13222 /FL=gb:NM_021943.1 </td> <td> NM_021943 </td> <td> zinc finger, AN1-type domain 3 </td> <td> ZFAND3 </td> <td> 60685 </td> <td> NM_021943 /// XM_005249269 /// XM_006715155 </td> <td>  </td> <td>  </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -94.07 </td> <td> 317.06 </td> <td> -4.10 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203164_at </td> <td> 203164_at </td> <td> BE464756 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE464756 /FEA=EST /DB_XREF=gi:9510618 /DB_XREF=est:hv89d09.x1 /CLONE=IMAGE:3180593 /UG=Hs.285176 acetyl-Coenzyme A transporter /FL=gb:D88152.1 gb:NM_004733.2 </td> <td> BE464756 </td> <td> solute carrier family 33 (acetyl-CoA transporter), member 1 </td> <td> SLC33A1 </td> <td> 9197 </td> <td> NM_001190992 /// NM_004733 /// XM_006713822 </td> <td> 0006810 // transport // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0015876 // acetyl-CoA transport // inferred from electronic annotation /// 0015876 // acetyl-CoA transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0008521 // acetyl-CoA transporter activity // inferred from electronic annotation </td> <td> 46.55 </td> <td> 106.18 </td> <td> 4.10 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201702_s_at </td> <td> 201702_s_at </td> <td> AI492873 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI492873 /FEA=EST /DB_XREF=gi:4393876 /DB_XREF=est:th78b05.x1 /CLONE=IMAGE:2124753 /UG=Hs.106019 protein phosphatase 1, regulatory subunit 10 /FL=gb:NM_002714.1 </td> <td> AI492873 </td> <td> protein phosphatase 1, regulatory subunit 10 </td> <td> PPP1R10 </td> <td> 5514 </td> <td> NM_002714 /// NR_072994 /// XM_006715130 /// XM_006715131 /// XM_006715132 /// XM_006715133 /// XM_006725489 /// XM_006725490 /// XM_006725491 /// XM_006725492 /// XM_006725703 /// XM_006725704 /// XM_006725705 /// XM_006725706 /// XM_006725820 /// XM_006725821 /// XM_006725822 /// XM_006725823 /// XM_006725912 /// XM_006725913 /// XM_006725914 /// XM_006725915 /// XM_006726005 /// XM_006726006 /// XM_006726007 /// XM_006726008 /// XM_006726100 /// XM_006726101 /// XM_006726102 /// XM_006726103 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006606 // protein import into nucleus // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation </td> <td> 0000785 // chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -43.60 </td> <td> 78.53 </td> <td> -4.10 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202370_s_at </td> <td> 202370_s_at </td> <td> NM_001755 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001755.1 /DEF=Homo sapiens core-binding factor, beta subunit (CBFB), transcript variant 2, mRNA.  /FEA=mRNA /GEN=CBFB /PROD=core-binding factor, beta subunit, isoform 2 /DB_XREF=gi:13124872 /UG=Hs.179881 core-binding factor, beta subunit /FL=gb:NM_001755.1 </td> <td> NM_001755 </td> <td> core-binding factor, beta subunit </td> <td> CBFB </td> <td> 865 </td> <td> NM_001755 /// NM_022845 /// XM_005256212 /// XM_006721321 </td> <td> 0001503 // ossification // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0030098 // lymphocyte differentiation // inferred from electronic annotation /// 0030099 // myeloid cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0060216 // definitive hemopoiesis // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 224.65 </td> <td> 650.05 </td> <td> 4.10 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 216323_x_at </td> <td> 216323_x_at </td> <td> K03460 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:K03460 /DEF=Human alpha-tubulin isotype H2-alpha gene, last exon /FEA=CDS /DB_XREF=gi:340016 /UG=Hs.75318 tubulin, alpha 1 (testis specific) </td> <td> K03460 </td> <td> tubulin, alpha 3c /// tubulin, alpha 3d </td> <td> TUBA3C /// TUBA3D </td> <td> 7278 /// 113457 </td> <td> NM_006001 /// NM_079836 /// NM_080386 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 45.55 </td> <td> 187.75 </td> <td> 4.10 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 200003_s_at </td> <td> 200003_s_at </td> <td> NM_000991 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000991.1 /DEF=Homo sapiens ribosomal protein L28 (RPL28), mRNA. /FEA=mRNA /GEN=RPL28 /PROD=ribosomal protein L28 /DB_XREF=gi:4506626 /UG=Hs.4437 ribosomal protein L28 /FL=gb:BC000072.1 gb:NM_000991.1 gb:U14969.1 </td> <td> NM_000991 </td> <td> microRNA 6805 /// ribosomal protein L28 </td> <td> MIR6805 /// RPL28 </td> <td> 6158 /// 102465483 </td> <td> NM_000991 /// NM_001136134 /// NM_001136135 /// NM_001136136 /// NM_001136137 /// NR_106863 /// XM_005259132 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0044297 // cell body // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -490.60 </td> <td> 2807.35 </td> <td> -4.10 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 221667_s_at </td> <td> 221667_s_at </td> <td> AF133207 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF133207.1 /DEF=Homo sapiens protein kinase (H11) mRNA, complete cds. /FEA=mRNA /GEN=H11 /PROD=protein kinase /DB_XREF=gi:5901654 /UG=Hs.111676 protein kinase H11; small stress protein-like protein HSP22 /FL=gb:AF133207.1 </td> <td> AF133207 </td> <td> heat shock 22kDa protein 8 </td> <td> HSPB8 </td> <td> 26353 </td> <td> NM_014365 </td> <td> 0006950 // response to stress // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0004672 // protein kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 46.03 </td> <td> 63.91 </td> <td> 4.09 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 205717_x_at </td> <td> 205717_x_at </td> <td> NM_002588 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002588.1 /DEF=Homo sapiens protocadherin gamma subfamily C, 3 (PCDHGC3), mRNA. /FEA=mRNA /GEN=PCDHGC3 /PROD=protocadherin gamma subfamily C, 3 /DB_XREF=gi:4505632 /UG=Hs.173310 protocadherin gamma subfamily C, 3 /FL=gb:L11373.1 gb:NM_002588.1 gb:AF152337.1 </td> <td> NM_002588 </td> <td> protocadherin gamma subfamily A, 1 /// protocadherin gamma subfamily A, 10 /// protocadherin gamma subfamily A, 11 /// protocadherin gamma subfamily A, 12 /// protocadherin gamma subfamily A, 2 /// protocadherin gamma subfamily A, 3 /// protocadherin gamma subfamily A, 4 /// protocadherin gamma subfamily A, 5 /// protocadherin gamma subfamily A, 6 /// protocadherin gamma subfamily A, 7 /// protocadherin gamma subfamily A, 8 /// protocadherin gamma subfamily A, 9 /// protocadherin gamma subfamily B, 1 /// protocadherin gamma subfamily B, 2 /// protocadherin gamma subfamily B, 3 /// protocadherin gamma subfamily B, 4 /// protocadherin gamma subfamily B, 5 /// protocadherin gamma subfamily B, 6 /// protocadherin gamma subfamily B, 7 /// protocadherin gamma subfamily C, 3 /// protocadherin gamma subfamily C, 4 /// protocadherin gamma subfamily C, 5 </td> <td> PCDHGA1 /// PCDHGA10 /// PCDHGA11 /// PCDHGA12 /// PCDHGA2 /// PCDHGA3 /// PCDHGA4 /// PCDHGA5 /// PCDHGA6 /// PCDHGA7 /// PCDHGA8 /// PCDHGA9 /// PCDHGB1 /// PCDHGB2 /// PCDHGB3 /// PCDHGB4 /// PCDHGB5 /// PCDHGB6 /// PCDHGB7 /// PCDHGC3 /// PCDHGC4 /// PCDHGC5 </td> <td> 5098 /// 8641 /// 9708 /// 26025 /// 56097 /// 56098 /// 56099 /// 56100 /// 56101 /// 56102 /// 56103 /// 56104 /// 56105 /// 56106 /// 56107 /// 56108 /// 56109 /// 56110 /// 56111 /// 56112 /// 56113 /// 56114 </td> <td> NM_002588 /// NM_003735 /// NM_003736 /// NM_014004 /// NM_018912 /// NM_018913 /// NM_018914 /// NM_018915 /// NM_018916 /// NM_018917 /// NM_018918 /// NM_018919 /// NM_018920 /// NM_018921 /// NM_018922 /// NM_018923 /// NM_018924 /// NM_018925 /// NM_018926 /// NM_018927 /// NM_018928 /// NM_018929 /// NM_031993 /// NM_032009 /// NM_032011 /// NM_032053 /// NM_032054 /// NM_032086 /// NM_032087 /// NM_032088 /// NM_032089 /// NM_032090 /// NM_032091 /// NM_032092 /// NM_032094 /// NM_032095 /// NM_032096 /// NM_032097 /// NM_032098 /// NM_032099 /// NM_032100 /// NM_032101 /// NM_032402 /// NM_032403 /// NM_032406 /// NM_032407 </td> <td> 0007155 // cell adhesion // traceable author statement /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -57.97 </td> <td> 299.09 </td> <td> -4.09 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202172_at </td> <td> 202172_at </td> <td> BG035116 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG035116 /FEA=EST /DB_XREF=gi:12428927 /DB_XREF=est:602324811F1 /CLONE=IMAGE:4412907 /UG=Hs.6557 zinc finger protein 161 /FL=gb:D28118.1 gb:NM_007146.1 </td> <td> BG035116 </td> <td> vascular endothelial zinc finger 1 </td> <td> VEZF1 </td> <td> 7716 </td> <td> NM_007146 /// XM_005257643 /// XM_005257644 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001885 // endothelial cell development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006968 // cellular defense response // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 43.65 </td> <td> 100.35 </td> <td> 4.09 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218231_at </td> <td> 218231_at </td> <td> NM_017567 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017567.1 /DEF=Homo sapiens N-Acetylglucosamine kinase (HSA242910), mRNA. /FEA=mRNA /GEN=HSA242910 /PROD=N-Acetylglucosamine kinase /DB_XREF=gi:8923736 /UG=Hs.7036 N-Acetylglucosamine kinase /FL=gb:BC001029.1 gb:BC005371.1 gb:NM_017567.1 </td> <td> NM_017567 </td> <td> N-acetylglucosamine kinase </td> <td> NAGK </td> <td> 55577 </td> <td> NM_017567 /// XM_005264412 /// XM_005264413 /// XM_005264415 /// XM_006712045 </td> <td> 0006044 // N-acetylglucosamine metabolic process // inferred from electronic annotation /// 0006051 // N-acetylmannosamine metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019262 // N-acetylneuraminate catabolic process // inferred from electronic annotation /// 0019262 // N-acetylneuraminate catabolic process // traceable author statement /// 0046835 // carbohydrate phosphorylation // inferred from direct assay /// 0046835 // carbohydrate phosphorylation // inferred from electronic annotation </td> <td> 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0009384 // N-acylmannosamine kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0045127 // N-acetylglucosamine kinase activity // inferred from direct assay </td> <td> 62.45 </td> <td> 168.65 </td> <td> 4.09 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204011_at </td> <td> 204011_at </td> <td> NM_005842 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005842.1 /DEF=Homo sapiens sprouty (Drosophila) homolog 2 (SPRY2), mRNA. /FEA=mRNA /GEN=SPRY2 /PROD=sprouty (Drosophila) homolog 2 /DB_XREF=gi:5032114 /UG=Hs.18676 sprouty (Drosophila) homolog 2 /FL=gb:AF039843.1 gb:NM_005842.1 </td> <td> NM_005842 </td> <td> sprouty homolog 2 (Drosophila) </td> <td> SPRY2 </td> <td> 10253 </td> <td> NM_005842 /// XM_005266217 /// XM_006719752 /// XM_006719753 </td> <td> 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010801 // negative regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from mutant phenotype /// 0034261 // negative regulation of Ras GTPase activity // inferred from electronic annotation /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0051387 // negative regulation of neurotrophin TRK receptor signaling pathway // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from mutant phenotype /// 0060425 // lung morphogenesis // inferred from electronic annotation /// 0060437 // lung growth // inferred from electronic annotation /// 0060541 // respiratory system development // inferred from electronic annotation /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030291 // protein serine/threonine kinase inhibitor activity // inferred by curator /// 0043539 // protein serine/threonine kinase activator activity // inferred from mutant phenotype </td> <td> 95.07 </td> <td> 176.44 </td> <td> 4.09 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217833_at </td> <td> 217833_at </td> <td> AL520908 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL520908 /FEA=EST /DB_XREF=gi:12784401 /DB_XREF=est:AL520908 /CLONE=CS0DB002YF01 (3 prime) /UG=Hs.155489 NS1-associated protein 1 /FL=gb:AF155568.1 gb:NM_006372.1 </td> <td> AL520908 </td> <td> synaptotagmin binding, cytoplasmic RNA interacting protein </td> <td> SYNCRIP </td> <td> 10492 </td> <td> NM_001159673 /// NM_001159674 /// NM_001159675 /// NM_001159676 /// NM_001159677 /// NM_001253771 /// NM_006372 /// XM_005248635 /// XM_005248636 /// XM_005248637 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype /// 0071346 // cellular response to interferon-gamma // inferred from direct assay </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from sequence or structural similarity /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 45.05 </td> <td> 138.78 </td> <td> 4.09 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218459_at </td> <td> 218459_at </td> <td> NM_022371 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022371.1 /DEF=Homo sapiens ATP-dependant interferon response protein 1 (ADIR), mRNA.  /FEA=mRNA /GEN=ADIR /PROD=ATP-dependant interferon response protein 1 /DB_XREF=gi:11641298 /UG=Hs.26267 ATP-dependant interferon response protein 1 /FL=gb:NM_022371.1 gb:BC001085.1 </td> <td> NM_022371 </td> <td> torsin family 3, member A </td> <td> TOR3A </td> <td> 64222 </td> <td> NM_022371 /// XM_006711485 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay </td> <td> 43.92 </td> <td> 81.06 </td> <td> 4.08 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212635_at </td> <td> 212635_at </td> <td> AW161626 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW161626 /FEA=EST /DB_XREF=gi:6300659 /DB_XREF=est:au68b11.x1 /CLONE=IMAGE:2781405 /UG=Hs.21739 Homo sapiens mRNA; cDNA DKFZp586I1518 (from clone DKFZp586I1518) </td> <td> AW161626 </td> <td> transportin 1 </td> <td> TNPO1 </td> <td> 3842 </td> <td> NM_002270 /// NM_153188 /// XM_005248500 /// XM_005248501 </td> <td> 0000060 // protein import into nucleus, translocation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 112.05 </td> <td> 508.27 </td> <td> 4.08 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203062_s_at </td> <td> 203062_s_at </td> <td> NM_014641 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014641.1 /DEF=Homo sapiens KIAA0170 gene product (KIAA0170), mRNA. /FEA=mRNA /GEN=KIAA0170 /PROD=KIAA0170 gene product /DB_XREF=gi:7661965 /UG=Hs.277585 KIAA0170 gene product /FL=gb:D79992.1 gb:NM_014641.1 </td> <td> NM_014641 </td> <td> mediator of DNA-damage checkpoint 1 </td> <td> MDC1 </td> <td> 9656 </td> <td> NM_014641 /// XM_005249492 /// XM_005249493 /// XM_005249494 /// XM_005249497 /// XM_005249498 /// XM_005272909 /// XM_005272910 /// XM_005272911 /// XM_005272914 /// XM_005272915 /// XM_005274899 /// XM_005274900 /// XM_005274901 /// XM_005274904 /// XM_005274905 /// XM_005275065 /// XM_005275066 /// XM_005275067 /// XM_005275070 /// XM_005275071 /// XM_005275196 /// XM_005275198 /// XM_005275199 /// XM_005275200 /// XM_005275321 /// XM_005275322 /// XM_005275323 /// XM_005275326 /// XM_005275327 /// XM_005275492 /// XM_005275493 /// XM_005275494 /// XM_005275497 /// XM_005275498 /// XM_005275629 /// XM_005275630 /// XM_005275631 /// XM_005275634 /// XM_005275635 /// XM_006725856 </td> <td> 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0031573 // intra-S DNA damage checkpoint // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0070975 // FHA domain binding // inferred from physical interaction </td> <td> 42.05 </td> <td> 78.30 </td> <td> 4.08 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 221229_s_at </td> <td> 221229_s_at </td> <td> NM_017910 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017910.2 /DEF=Homo sapiens hypothetical protein FLJ20628 (FLJ20628), mRNA. /FEA=mRNA /GEN=FLJ20628 /PROD=hypothetical protein FLJ20628 /DB_XREF=gi:13435382 /FL=gb:NM_017910.2 </td> <td> NM_017910 </td> <td> tRNA methyltransferase 61 homolog B (S. cerevisiae) </td> <td> TRMT61B </td> <td> 55006 </td> <td> NM_017910 /// XM_005264393 /// XM_005264394 /// XM_006712037 /// XR_244945 </td> <td> 0006464 // cellular protein modification process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0030488 // tRNA methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from direct assay /// 0070901 // mitochondrial tRNA methylation // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0031515 // tRNA (m1A) methyltransferase complex // inferred from electronic annotation </td> <td> 0004719 // protein-L-isoaspartate (D-aspartate) O-methyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016429 // tRNA (adenine-N1-)-methyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 54.70 </td> <td> 77.58 </td> <td> 4.07 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 200963_x_at </td> <td> 200963_x_at </td> <td> NM_000993 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000993.1 /DEF=Homo sapiens ribosomal protein L31 (RPL31), mRNA. /FEA=mRNA /GEN=RPL31 /PROD=ribosomal protein L31 /DB_XREF=gi:4506632 /UG=Hs.184014 ribosomal protein L31 /FL=gb:NM_000993.1 </td> <td> NM_000993 </td> <td> ribosomal protein L31 </td> <td> RPL31 </td> <td> 6160 </td> <td> NM_000993 /// NM_001098577 /// NM_001099693 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -900.50 </td> <td> 3545.43 </td> <td> -4.07 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212950_at </td> <td> 212950_at </td> <td> BF941499 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF941499 /FEA=EST /DB_XREF=gi:12358819 /DB_XREF=est:nac74e09.x1 /CLONE=IMAGE:3439985 /UG=Hs.22039 KIAA0758 protein </td> <td> BF941499 </td> <td> G protein-coupled receptor 116 </td> <td> GPR116 </td> <td> 221395 </td> <td> NM_001098518 /// NM_015234 /// XM_005248892 /// XM_005248893 /// XM_005248894 /// XM_005248895 </td> <td> 0006112 // energy reserve metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0019216 // regulation of lipid metabolic process // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043129 // surfactant homeostasis // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -45.05 </td> <td> 158.95 </td> <td> -4.07 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203059_s_at </td> <td> 203059_s_at </td> <td> NM_004670 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004670.1 /DEF=Homo sapiens 3-phosphoadenosine 5-phosphosulfate synthase 2 (PAPSS2), mRNA.  /FEA=mRNA /GEN=PAPSS2 /PROD=3-prime-phosphoadenosine 5-prime-phosphosulfatesynthase 2 /DB_XREF=gi:4758879 /UG=Hs.274230 3-phosphoadenosine 5-phosphosulfate synthase 2 /FL=gb:AF150754.2 gb:AF313907.1 gb:AF091242.1 gb:NM_004670.1 gb:AF074331.1 gb:AF173365.1 </td> <td> NM_004670 </td> <td> 3'-phosphoadenosine 5'-phosphosulfate synthase 2 </td> <td> PAPSS2 </td> <td> 9060 </td> <td> NM_001015880 /// NM_004670 </td> <td> 0000103 // sulfate assimilation // inferred from electronic annotation /// 0001501 // skeletal system development // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement /// 0050428 // 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process // traceable author statement /// 0060348 // bone development // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004020 // adenylylsulfate kinase activity // inferred from electronic annotation /// 0004781 // sulfate adenylyltransferase (ATP) activity // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from sequence or structural similarity </td> <td> -90.30 </td> <td> 206.62 </td> <td> -4.07 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201607_at </td> <td> 201607_at </td> <td> AI694451 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI694451 /FEA=EST /DB_XREF=gi:4971791 /DB_XREF=est:wd83h06.x1 /CLONE=IMAGE:2338235 /UG=Hs.172589 nuclear phosphoprotein similar to S. cerevisiae PWP1 /FL=gb:BC001652.1 gb:L07758.1 gb:NM_007062.1 </td> <td> AI694451 </td> <td> PWP1 homolog (S. cerevisiae) </td> <td> PWP1 </td> <td> 11137 </td> <td> NM_007062 </td> <td> 0006351 // transcription, DNA-templated // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 43.10 </td> <td> 116.48 </td> <td> 4.07 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218611_at </td> <td> 218611_at </td> <td> NM_016545 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016545.1 /DEF=Homo sapiens hypothetical protein SBBI48 (LOC51278), mRNA. /FEA=mRNA /GEN=LOC51278 /PROD=hypothetical protein SBBI48 /DB_XREF=gi:7706080 /UG=Hs.15725 hypothetical protein SBBI48 /FL=gb:BC000128.2 gb:AF178984.1 gb:NM_016545.1 </td> <td> NM_016545 </td> <td> immediate early response 5 </td> <td> IER5 </td> <td> 51278 </td> <td> NM_016545 </td> <td>  </td> <td>  </td> <td>  </td> <td> -96.22 </td> <td> 186.89 </td> <td> -4.07 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209029_at </td> <td> 209029_at </td> <td> AF193844 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF193844.1 /DEF=Homo sapiens COP9 complex subunit 7a mRNA, complete cds. /FEA=mRNA /PROD=COP9 complex subunit 7a /DB_XREF=gi:6120134 /UG=Hs.3758 COP9 complex subunit 7a /FL=gb:AB033603.1 gb:AF193844.1 gb:AF210052.1 gb:NM_016319.1 </td> <td> AF193844 </td> <td> COP9 signalosome subunit 7A </td> <td> COPS7A </td> <td> 50813 </td> <td> NM_001164093 /// NM_001164094 /// NM_001164095 /// NM_016319 /// XM_005253694 /// XM_005253695 </td> <td> 0010388 // cullin deneddylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // COP9 signalosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 52.77 </td> <td> 177.94 </td> <td> 4.07 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218235_s_at </td> <td> 218235_s_at </td> <td> NM_016037 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016037.1 /DEF=Homo sapiens CGI-94 protein (LOC51118), mRNA. /FEA=mRNA /GEN=LOC51118 /PROD=CGI-94 protein /DB_XREF=gi:7705808 /UG=Hs.111449 CGI-94 protein /FL=gb:BC005182.1 gb:AF151852.1 gb:NM_016037.1 gb:AF067802.1 </td> <td> NM_016037 </td> <td> UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) </td> <td> UTP11L </td> <td> 51118 </td> <td> NM_016037 </td> <td> 0006364 // rRNA processing // not recorded /// 0007399 // nervous system development // inferred from mutant phenotype /// 0042274 // ribosomal small subunit biogenesis // not recorded /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0048011 // neurotrophin TRK receptor signaling pathway // inferred from mutant phenotype /// 0097194 // execution phase of apoptosis // inferred from mutant phenotype /// 2001272 // positive regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis // inferred by curator </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0032040 // small-subunit processome // not recorded </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 46.05 </td> <td> 166.62 </td> <td> 4.07 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 216321_s_at </td> <td> 216321_s_at </td> <td> X03348 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X03348.1 /DEF=Human mRNA for beta-glucocorticoid receptor (clone OB10). /FEA=mRNA /PROD=beta-glucocorticoid receptor /DB_XREF=gi:31681 /UG=Hs.75772 nuclear receptor subfamily 3, group C, member 1 </td> <td> X03348 </td> <td> nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) </td> <td> NR3C1 </td> <td> 2908 </td> <td> NM_000176 /// NM_001018074 /// NM_001018075 /// NM_001018076 /// NM_001018077 /// NM_001020825 /// NM_001024094 /// NM_001204258 /// NM_001204259 /// NM_001204260 /// NM_001204261 /// NM_001204262 /// NM_001204263 /// NM_001204264 /// NM_001204265 /// XM_005268419 /// XM_005268420 /// XM_005268421 /// XM_005268422 /// XM_005268423 </td> <td> 0006111 // regulation of gluconeogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008211 // glucocorticoid metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0031946 // regulation of glucocorticoid biosynthetic process // inferred from electronic annotation /// 0042921 // glucocorticoid receptor signaling pathway // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043402 // glucocorticoid mediated signaling pathway // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004883 // glucocorticoid receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -113.45 </td> <td> 91.73 </td> <td> -4.06 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218137_s_at </td> <td> 218137_s_at </td> <td> NM_021940 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021940.1 /DEF=Homo sapiens hypothetical protein FLJ13159 (FLJ13159), mRNA. /FEA=mRNA /GEN=FLJ13159 /PROD=hypothetical protein FLJ13159 /DB_XREF=gi:11345477 /UG=Hs.4273 hypothetical protein FLJ13159 /FL=gb:NM_021940.1 </td> <td> NM_021940 </td> <td> small ArfGAP 1 </td> <td> SMAP1 </td> <td> 60682 </td> <td> NM_001044305 /// NM_001281439 /// NM_001281440 /// NM_021940 /// XM_005248760 /// XM_006715547 </td> <td> 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045648 // positive regulation of erythrocyte differentiation // inferred from electronic annotation /// 2000369 // regulation of clathrin-mediated endocytosis // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -76.35 </td> <td> 254.68 </td> <td> -4.06 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202509_s_at </td> <td> 202509_s_at </td> <td> AI862445 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI862445 /FEA=EST /DB_XREF=gi:5526552 /DB_XREF=est:td16e10.x1 /CLONE=IMAGE:2075850 /UG=Hs.101382 tumor necrosis factor, alpha-induced protein 2 /FL=gb:M92357.1 gb:NM_006291.1 </td> <td> AI862445 </td> <td> tumor necrosis factor, alpha-induced protein 2 </td> <td> TNFAIP2 </td> <td> 7127 </td> <td> NM_006291 /// XM_006720243 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0000145 // exocyst // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement </td> <td>  </td> <td> -47.22 </td> <td> 43.51 </td> <td> -4.06 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204030_s_at </td> <td> 204030_s_at </td> <td> NM_014575 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014575.1 /DEF=Homo sapiens schwannomin interacting protein 1 (SCHIP-1), mRNA. /FEA=mRNA /GEN=SCHIP-1 /PROD=schwannomin interacting protein 1 /DB_XREF=gi:7657539 /UG=Hs.61490 schwannomin interacting protein 1 /FL=gb:AF145713.1 gb:NM_014575.1 </td> <td> NM_014575 </td> <td> IQCJ-SCHIP1 readthrough /// schwannomin interacting protein 1 </td> <td> IQCJ-SCHIP1 /// SCHIP1 </td> <td> 29970 /// 100505385 </td> <td> NM_001197107 /// NM_001197108 /// NM_001197109 /// NM_001197113 /// NM_001197114 /// NM_014575 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 113.78 </td> <td> 354.04 </td> <td> 4.06 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 208394_x_at </td> <td> 208394_x_at </td> <td> NM_007036 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007036.2 /DEF=Homo sapiens endothelial cell-specific molecule 1 (ESM1), mRNA. /FEA=mRNA /GEN=ESM1 /PROD=endothelial cell-specific molecule 1 precursor /DB_XREF=gi:13259505 /UG=Hs.41716 endothelial cell-specific molecule 1 /FL=gb:NM_007036.2 </td> <td> NM_007036 </td> <td> endothelial cell-specific molecule 1 </td> <td> ESM1 </td> <td> 11082 </td> <td> NM_001135604 /// NM_007036 </td> <td> 0001525 // angiogenesis // inferred from expression pattern /// 0001558 // regulation of cell growth // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 1902204 // positive regulation of hepatocyte growth factor receptor signaling pathway // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation </td> <td> 0005171 // hepatocyte growth factor receptor binding // inferred from physical interaction /// 0005178 // integrin binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0008083 // growth factor activity // non-traceable author statement </td> <td> -173.70 </td> <td> 347.27 </td> <td> -4.06 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212214_at </td> <td> 212214_at </td> <td> BF439570 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF439570 /FEA=EST /DB_XREF=gi:11452177 /DB_XREF=est:nab69b11.x1 /CLONE=IMAGE:3272805 /UG=Hs.147946 optic atrophy 1 (autosomal dominant) </td> <td> BF439570 </td> <td> optic atrophy 1 (autosomal dominant) </td> <td> OPA1 </td> <td> 4976 </td> <td> NM_015560 /// NM_130831 /// NM_130832 /// NM_130833 /// NM_130834 /// NM_130835 /// NM_130836 /// NM_130837 </td> <td> 0000266 // mitochondrial fission // traceable author statement /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0007005 // mitochondrion organization // non-traceable author statement /// 0007007 // inner mitochondrial membrane organization // inferred from direct assay /// 0007601 // visual perception // inferred from mutant phenotype /// 0008053 // mitochondrial fusion // inferred from direct assay /// 0008053 // mitochondrial fusion // inferred from mutant phenotype /// 0008053 // mitochondrial fusion // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0019896 // axon transport of mitochondrion // traceable author statement /// 0050896 // response to stimulus // inferred from electronic annotation /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0090398 // cellular senescence // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // non-traceable author statement /// 0005758 // mitochondrial intermembrane space // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030061 // mitochondrial crista // inferred from direct assay /// 0030425 // dendrite // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // non-traceable author statement /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 42.80 </td> <td> 105.70 </td> <td> 4.06 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212544_at </td> <td> 212544_at </td> <td> AI131008 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI131008 /FEA=EST /DB_XREF=gi:3601024 /DB_XREF=est:qc15h06.x1 /CLONE=IMAGE:1709723 /UG=Hs.2210 thyroid hormone receptor interactor 3 </td> <td> AI131008 </td> <td> zinc finger, HIT-type containing 3 </td> <td> ZNHIT3 </td> <td> 9326 </td> <td> NM_001033577 /// NM_001281432 /// NM_001281433 /// NM_001281434 /// NM_004773 /// NR_104009 /// NR_104010 /// NR_104011 </td> <td> 0006355 // regulation of transcription, DNA-templated // traceable author statement </td> <td> 0005622 // intracellular // non-traceable author statement </td> <td> 0046872 // metal ion binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // traceable author statement </td> <td> -35.45 </td> <td> 196.97 </td> <td> -4.05 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212769_at </td> <td> 212769_at </td> <td> AI567426 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI567426 /FEA=EST /DB_XREF=gi:4525878 /DB_XREF=est:tn38b04.x1 /CLONE=IMAGE:2169871 /UG=Hs.31305 KIAA1547 protein </td> <td> AI567426 </td> <td> transducin-like enhancer of split 3 </td> <td> TLE3 </td> <td> 7090 </td> <td> NM_001105192 /// NM_001282979 /// NM_001282980 /// NM_001282981 /// NM_001282982 /// NM_005078 /// NM_020908 /// XM_005254622 /// XM_005254623 /// XM_005254625 /// XM_005254628 /// XM_005254633 /// XM_006720662 /// XM_006720663 /// XM_006720664 /// XM_006720665 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -39.75 </td> <td> 43.45 </td> <td> -4.05 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 219420_s_at </td> <td> 219420_s_at </td> <td> NM_023077 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_023077.1 /DEF=Homo sapiens hypothetical protein FLJ12439 (FLJ12439), mRNA. /FEA=mRNA /GEN=FLJ12439 /PROD=hypothetical protein FLJ12439 /DB_XREF=gi:12751490 /UG=Hs.164371 hypothetical protein FLJ12439 /FL=gb:NM_023077.1 </td> <td> NM_023077 </td> <td> cytochrome c oxidase assembly factor 7 (putative) </td> <td> COA7 </td> <td> 65260 </td> <td> NM_023077 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation </td> <td>  </td> <td> 58.95 </td> <td> 62.42 </td> <td> 4.05 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201545_s_at </td> <td> 201545_s_at </td> <td> NM_004643 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004643.1 /DEF=Homo sapiens poly(A)-binding protein, nuclear 1 (PABPN1), mRNA. /FEA=mRNA /GEN=PABPN1 /PROD=poly(A)-binding protein, nuclear 1 /DB_XREF=gi:4758875 /UG=Hs.117176 poly(A)-binding protein, nuclear 1 /FL=gb:NM_004643.1 </td> <td> NM_004643 </td> <td> BCL2L2-PABPN1 readthrough /// poly(A) binding protein, nuclear 1 </td> <td> BCL2L2-PABPN1 /// PABPN1 </td> <td> 8106 /// 100529063 </td> <td> NM_001199864 /// NM_004643 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016973 // poly(A)+ mRNA export from nucleus // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // traceable author statement /// 0019054 // modulation by virus of host process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0046778 // modification by virus of host mRNA processing // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 55.82 </td> <td> 130.81 </td> <td> 4.05 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 220926_s_at </td> <td> 220926_s_at </td> <td> NM_025191 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025191.1 /DEF=Homo sapiens hypothetical protein FLJ13033 (FLJ13033), mRNA. /FEA=mRNA /GEN=FLJ13033 /PROD=hypothetical protein FLJ13033 /DB_XREF=gi:13376781 /UG=Hs.301997 hypothetical protein FLJ13033 /FL=gb:NM_025191.1 </td> <td> NM_025191 </td> <td> ER degradation enhancer, mannosidase alpha-like 3 </td> <td> EDEM3 </td> <td> 80267 </td> <td> NM_025191 /// XM_005245499 </td> <td> 0006457 // protein folding // traceable author statement /// 0006516 // glycoprotein catabolic process // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0004569 // glycoprotein endo-alpha-1,2-mannosidase activity // inferred from electronic annotation /// 0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 56.95 </td> <td> 64.70 </td> <td> 4.05 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212741_at </td> <td> 212741_at </td> <td> AA923354 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA923354 /FEA=EST /DB_XREF=gi:3070663 /DB_XREF=est:ol46a12.s1 /CLONE=IMAGE:1526494 /UG=Hs.183109 monoamine oxidase A </td> <td> AA923354 </td> <td> monoamine oxidase A </td> <td> MAOA </td> <td> 4128 </td> <td> NM_000240 /// NM_001270458 </td> <td> 0006576 // cellular biogenic amine metabolic process // traceable author statement /// 0006584 // catecholamine metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007610 // behavior // traceable author statement /// 0042135 // neurotransmitter catabolic process // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // traceable author statement /// 0042420 // dopamine catabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0008131 // primary amine oxidase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation </td> <td> 50.12 </td> <td> 134.89 </td> <td> 4.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203273_s_at </td> <td> 203273_s_at </td> <td> NM_007275 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007275.1 /DEF=Homo sapiens lung cancer candidate (FUS1), mRNA. /FEA=mRNA /GEN=FUS1 /PROD=lung cancer candidate /DB_XREF=gi:6005759 /UG=Hs.8186 lung cancer candidate /FL=gb:AF055479.1 gb:NM_007275.1 </td> <td> NM_007275 </td> <td> tumor suppressor candidate 2 </td> <td> TUSC2 </td> <td> 11334 </td> <td> NM_007275 </td> <td> 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0032618 // interleukin-15 production // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from electronic annotation /// 0071609 // chemokine (C-C motif) ligand 5 production // inferred from electronic annotation /// 2000377 // regulation of reactive oxygen species metabolic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation </td> <td>  </td> <td> 46.65 </td> <td> 54.95 </td> <td> 4.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 213063_at </td> <td> 213063_at </td> <td> BF970253 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF970253 /FEA=EST /DB_XREF=gi:12337468 /DB_XREF=est:602273505F1 /CLONE=IMAGE:4361569 /UG=Hs.173684 Homo sapiens mRNA; cDNA DKFZp762G207 (from clone DKFZp762G207) </td> <td> BF970253 </td> <td> zinc finger CCCH-type containing 14 </td> <td> ZC3H14 </td> <td> 79882 </td> <td> NM_001160103 /// NM_001160104 /// NM_024824 /// NM_207660 /// NM_207661 /// NM_207662 /// XM_005268067 /// XM_005268068 /// XM_005268069 /// XM_005268070 /// XM_005268071 /// XM_005268073 /// XM_006720257 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 43.35 </td> <td> 79.97 </td> <td> 4.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 35666_at </td> <td> 35666_at </td> <td> U38276 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. U38276:Human semaphorin III family homolog mRNA, complete cds /cds=(315,2576) /gb=U38276 /gi=1061350 /ug=Hs.32981 /len=3534 </td> <td> U38276 </td> <td> sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F </td> <td> SEMA3F </td> <td> 6405 </td> <td> NM_004186 /// XM_005265381 /// XM_005265382 /// XM_006713289 /// XM_006713290 </td> <td> 0001755 // neural crest cell migration // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from direct assay /// 0021675 // nerve development // inferred from sequence or structural similarity /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048846 // axon extension involved in axon guidance // inferred from sequence or structural similarity /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0061549 // sympathetic ganglion development // inferred from sequence or structural similarity /// 0097490 // sympathetic neuron projection extension // inferred from sequence or structural similarity /// 0097491 // sympathetic neuron projection guidance // inferred from sequence or structural similarity /// 1902285 // semaphorin-plexin signaling pathway involved in neuron projection guidance // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0045499 // chemorepellent activity // inferred from direct assay </td> <td> 101.20 </td> <td> 222.25 </td> <td> 4.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204510_at </td> <td> 204510_at </td> <td> NM_003503 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003503.2 /DEF=Homo sapiens CDC7 (cell division cycle 7, S. cerevisiae, homolog)-like 1 (CDC7L1), mRNA.  /FEA=mRNA /GEN=CDC7L1 /PROD=CDC7-like 1 /DB_XREF=gi:11038647 /UG=Hs.28853 CDC7 (cell division cycle 7, S. cerevisiae, homolog)-like 1 /FL=gb:NM_003503.2 gb:AB003698.1 gb:AF005209.1 gb:AF015592.1 </td> <td> NM_003503 </td> <td> cell division cycle 7 </td> <td> CDC7 </td> <td> 8317 </td> <td> NM_001134419 /// NM_001134420 /// NM_003503 /// XM_005271241 /// XM_005271244 /// XM_005271245 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0010571 // positive regulation of nuclear cell cycle DNA replication // inferred from mutant phenotype /// 0010971 // positive regulation of G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044770 // cell cycle phase transition // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0045171 // intercellular bridge // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from mutant phenotype /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 36.98 </td> <td> 55.81 </td> <td> 4.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 221014_s_at </td> <td> 221014_s_at </td> <td> NM_031296 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031296.1 /DEF=Homo sapiens hypothetical protein DKFZp434G099 (DKFZP434G099), mRNA.  /FEA=mRNA /GEN=DKFZP434G099 /PROD=hypothetical protein DKFZp434G099 /DB_XREF=gi:13786128 /FL=gb:NM_031296.1 </td> <td> NM_031296 </td> <td> RAB33B, member RAS oncogene family </td> <td> RAB33B </td> <td> 83452 </td> <td> NM_031296 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 2000156 // regulation of retrograde vesicle-mediated transport, Golgi to ER // inferred from mutant phenotype /// 2000785 // regulation of autophagic vacuole assembly // inferred from sequence or structural similarity </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005796 // Golgi lumen // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 91.23 </td> <td> 74.04 </td> <td> 4.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 222192_s_at </td> <td> 222192_s_at </td> <td> AK021672 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK021672.1 /DEF=Homo sapiens cDNA FLJ11610 fis, clone HEMBA1003985. /FEA=mRNA /DB_XREF=gi:10432904 /UG=Hs.63300 hypothetical protein FLJ21820 </td> <td> AK021672 </td> <td> chromosome 2 open reading frame 43 </td> <td> C2orf43 </td> <td> 60526 </td> <td> NM_001282719 /// NM_001282720 /// NM_001282721 /// NM_001282722 /// NM_001282723 /// NM_001282724 /// NM_021925 /// NR_104233 /// XR_426990 /// XR_426991 /// XR_426992 </td> <td>  </td> <td>  </td> <td>  </td> <td> 39.88 </td> <td> 92.16 </td> <td> 4.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204594_s_at </td> <td> 204594_s_at </td> <td> NM_013298 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013298.1 /DEF=Homo sapiens hypothetical protein (HSU79252), mRNA. /FEA=mRNA /GEN=HSU79252 /PROD=hypothetical protein /DB_XREF=gi:9558736 /UG=Hs.240062 hypothetical protein /FL=gb:U79252.1 gb:NM_013298.1 </td> <td> NM_013298 </td> <td> mitochondrial elongation factor 1 </td> <td> MIEF1 </td> <td> 54471 </td> <td> NM_019008 /// XM_005261652 </td> <td> 0000266 // mitochondrial fission // inferred from mutant phenotype /// 0008053 // mitochondrial fusion // inferred from mutant phenotype /// 0090141 // positive regulation of mitochondrial fission // inferred from direct assay /// 0090141 // positive regulation of mitochondrial fission // traceable author statement /// 0090314 // positive regulation of protein targeting to membrane // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005777 // peroxisome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019003 // GDP binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0043531 // ADP binding // inferred from direct assay </td> <td> 44.90 </td> <td> 104.10 </td> <td> 4.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202020_s_at </td> <td> 202020_s_at </td> <td> NM_006055 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006055.1 /DEF=Homo sapiens LanC (bacterial lantibiotic synthetase component C)-like 1 (LANCL1), mRNA.  /FEA=mRNA /GEN=LANCL1 /PROD=lanthionine synthetase C-like protein 1 /DB_XREF=gi:5174444 /UG=Hs.13351 LanC (bacterial lantibiotic synthetase component C)-like 1 /FL=gb:NM_006055.1 </td> <td> NM_006055 </td> <td> LanC lantibiotic synthetase component C-like 1 (bacterial) </td> <td> LANCL1 </td> <td> 10314 </td> <td> NM_001136574 /// NM_001136575 /// NM_006055 /// XM_005246243 </td> <td> 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0043295 // glutathione binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay </td> <td> 87.90 </td> <td> 121.70 </td> <td> 4.04 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 206557_at </td> <td> 206557_at </td> <td> NM_024924 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024924.1 /DEF=Homo sapiens hypothetical protein FLJ12985 (FLJ12985), mRNA. /FEA=mRNA /GEN=FLJ12985 /PROD=hypothetical protein FLJ12985 /DB_XREF=gi:13430873 /UG=Hs.270435 hypothetical protein FLJ12985 /FL=gb:NM_024924.1 </td> <td> NM_024924 </td> <td> zinc finger protein 702, pseudogene </td> <td> ZNF702P </td> <td> 79986 </td> <td> NM_024924 /// NR_003578 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 33.68 </td> <td> 56.81 </td> <td> 4.03 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202375_at </td> <td> 202375_at </td> <td> NM_014822 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014822.1 /DEF=Homo sapiens SEC24 (S. cerevisiae) related gene family, member D (SEC24D), mRNA.  /FEA=mRNA /GEN=SEC24D /PROD=SEC24 (S. cerevisiae) related gene family,member D /DB_XREF=gi:7662658 /UG=Hs.19822 SEC24 (S. cerevisiae) related gene family, member D /FL=gb:AB018298.1 gb:AF130464.2 gb:NM_014822.1 </td> <td> NM_014822 </td> <td> SEC24 family member D </td> <td> SEC24D </td> <td> 9871 </td> <td> NM_014822 /// XM_005263378 /// XM_005263379 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0008270 // zinc ion binding // inferred from electronic annotation </td> <td> 74.50 </td> <td> 137.22 </td> <td> 4.03 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212290_at </td> <td> 212290_at </td> <td> AA527433 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA527433 /FEA=EST /DB_XREF=gi:2269502 /DB_XREF=est:ng41b03.s1 /CLONE=IMAGE:937325 /UG=Hs.14846 Homo sapiens mRNA; cDNA DKFZp564D016 (from clone DKFZp564D016) </td> <td> AA527433 </td> <td> solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 </td> <td> SLC7A1 </td> <td> 6541 </td> <td> NM_003045 /// XM_005266507 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0015809 // arginine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015181 // arginine transmembrane transporter activity // inferred from electronic annotation </td> <td> -213.68 </td> <td> 285.46 </td> <td> -4.03 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201941_at </td> <td> 201941_at </td> <td> BE349147 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE349147 /FEA=EST /DB_XREF=gi:9261086 /DB_XREF=est:ht51f05.x1 /CLONE=IMAGE:3150273 /UG=Hs.5057 carboxypeptidase D /FL=gb:U65090.1 gb:D85390.1 gb:NM_001304.2 </td> <td> BE349147 </td> <td> carboxypeptidase D </td> <td> CPD </td> <td> 1362 </td> <td> NM_001199775 /// NM_001304 </td> <td> 0006508 // proteolysis // inferred from electronic annotation </td> <td> 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0004185 // serine-type carboxypeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -108.88 </td> <td> 316.41 </td> <td> -4.03 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201776_s_at </td> <td> 201776_s_at </td> <td> AK001487 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001487.1 /DEF=Homo sapiens cDNA FLJ10625 fis, clone NT2RP2005540, highly similar to Homo sapiens mRNA for KIAA0494 protein.  /FEA=mRNA /DB_XREF=gi:7022773 /UG=Hs.62515 KIAA0494 gene product /FL=gb:BC002525.1 gb:AB007963.1 gb:NM_014774.1 </td> <td> AK001487 </td> <td> EF-hand calcium binding domain 14 </td> <td> EFCAB14 </td> <td> 9813 </td> <td> NM_014774 </td> <td>  </td> <td>  </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 83.40 </td> <td> 120.28 </td> <td> 4.03 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201157_s_at </td> <td> 201157_s_at </td> <td> AF020500 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF020500.1 /DEF=Homo sapiens myristoyl CoA:protein N-myristoyltransferase mRNA, complete cds.  /FEA=CDS /PROD=myristoyl CoA:protein N-myristoyltransferase /DB_XREF=gi:2760893 /UG=Hs.111039 N-myristoyltransferase 1 /FL=gb:NM_021079.1 gb:AF020500.1 gb:AF043324.1 </td> <td> AF020500 </td> <td> N-myristoyltransferase 1 </td> <td> NMT1 </td> <td> 4836 </td> <td> NM_021079 /// XM_005257421 /// XM_005257422 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006498 // N-terminal protein lipidation // non-traceable author statement /// 0006499 // N-terminal protein myristoylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0009249 // protein lipoylation // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay </td> <td> 0003824 // catalytic activity // traceable author statement /// 0004379 // glycylpeptide N-tetradecanoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019107 // myristoyltransferase activity // inferred from electronic annotation </td> <td> -69.43 </td> <td> 310.44 </td> <td> -4.03 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 208843_s_at </td> <td> 208843_s_at </td> <td> BC001408 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001408.1 /DEF=Homo sapiens, clone MGC:1233, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:1233) /DB_XREF=gi:12655112 /UG=Hs.6880 DKFZP434D156 protein /FL=gb:BC001408.1 </td> <td> BC001408 </td> <td> golgi reassembly stacking protein 2, 55kDa </td> <td> GORASP2 </td> <td> 26003 </td> <td> NM_001201428 /// NM_015530 /// XM_006712408 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006996 // organelle organization // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 46.27 </td> <td> 195.34 </td> <td> 4.03 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 220934_s_at </td> <td> 220934_s_at </td> <td> NM_024084 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024084.1 /DEF=Homo sapiens hypothetical protein MGC3196 (MGC3196), mRNA. /FEA=mRNA /GEN=MGC3196 /PROD=hypothetical protein MGC3196 /DB_XREF=gi:13129079 /UG=Hs.309161 hypothetical protein MGC3196 /FL=gb:BC001204.1 gb:NM_024084.1 </td> <td> NM_024084 </td> <td> transmembrane protein 223 </td> <td> TMEM223 </td> <td> 79064 </td> <td> NM_001080501 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 50.40 </td> <td> 83.58 </td> <td> 4.03 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 217750_s_at </td> <td> 217750_s_at </td> <td> NM_023079 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_023079.1 /DEF=Homo sapiens hypothetical protein FLJ13855 (FLJ13855), mRNA. /FEA=mRNA /GEN=FLJ13855 /PROD=hypothetical protein FLJ13855 /DB_XREF=gi:12751494 /UG=Hs.168232 hypothetical protein FLJ13855 /FL=gb:NM_023079.1 </td> <td> NM_023079 </td> <td> ubiquitin-conjugating enzyme E2Z </td> <td> UBE2Z </td> <td> 65264 </td> <td> NM_023079 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> -128.98 </td> <td> 368.74 </td> <td> -4.02 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201653_at </td> <td> 201653_at </td> <td> NM_005776 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005776.1 /DEF=Homo sapiens cornichon-like (CNIL), mRNA. /FEA=mRNA /GEN=CNIL /PROD=cornichon-like /DB_XREF=gi:5031638 /UG=Hs.201673 cornichon-like /FL=gb:AF104398.1 gb:AF070654.1 gb:AF031379.1 gb:NM_005776.1 </td> <td> NM_005776 </td> <td> cornichon family AMPA receptor auxiliary protein 1 </td> <td> CNIH1 </td> <td> 10175 </td> <td> NM_001009551 /// NM_005776 /// XR_245653 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -116.73 </td> <td> 761.61 </td> <td> -4.02 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202909_at </td> <td> 202909_at </td> <td> NM_014805 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014805.1 /DEF=Homo sapiens KIAA0766 gene product (KIAA0766), mRNA. /FEA=mRNA /GEN=KIAA0766 /PROD=KIAA0766 gene product /DB_XREF=gi:7662293 /UG=Hs.28020 KIAA0766 gene product /FL=gb:AF059751.1 gb:AB018309.1 gb:NM_014805.1 </td> <td> NM_014805 </td> <td> EPM2A (laforin) interacting protein 1 </td> <td> EPM2AIP1 </td> <td> 9852 </td> <td> NM_014805 </td> <td>  </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation </td> <td>  </td> <td> 54.10 </td> <td> 60.40 </td> <td> 4.02 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209013_x_at </td> <td> 209013_x_at </td> <td> AF091395 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF091395.1 /DEF=Homo sapiens Trio isoform mRNA, complete cds. /FEA=mRNA /PROD=Trio isoform /DB_XREF=gi:3644047 /UG=Hs.171957 triple functional domain (PTPRF interacting) /FL=gb:AF091395.1 </td> <td> AF091395 </td> <td> trio Rho guanine nucleotide exchange factor </td> <td> TRIO </td> <td> 7204 </td> <td> NM_007118 /// XM_006714495 /// XR_241714 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043087 // regulation of GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation </td> <td> -315.00 </td> <td> 364.50 </td> <td> -4.02 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 210580_x_at </td> <td> 210580_x_at </td> <td> L25275 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L25275.1 /DEF=Human estrogen sulfotransferase mRNA, complete cds. /FEA=mRNA /PROD=estrogen sulfotransferase /DB_XREF=gi:463124 /UG=Hs.274614 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3 /FL=gb:L25275.1 </td> <td> L25275 </td> <td> sulfotransferase 1A3/1A4-like /// SLX1A-SULT1A3 readthrough (NMD candidate) /// SLX1B-SULT1A4 readthrough (NMD candidate) /// sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3 /// sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4 </td> <td> LOC101929857 /// SLX1A-SULT1A3 /// SLX1B-SULT1A4 /// SULT1A3 /// SULT1A4 </td> <td> 6818 /// 445329 /// 100526830 /// 100526831 /// 101929857 </td> <td> NM_001017387 /// NM_001017389 /// NM_001017390 /// NM_001017391 /// NM_003166 /// NM_177552 /// NR_037608 /// NR_037609 /// XM_005276506 /// XM_005276507 /// XM_006726621 </td> <td> 0006584 // catecholamine metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0009812 // flavonoid metabolic process // inferred from direct assay /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement /// 0051923 // sulfation // inferred from direct assay </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0004062 // aryl sulfotransferase activity // traceable author statement /// 0008146 // sulfotransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -51.47 </td> <td> 131.86 </td> <td> -4.02 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 213113_s_at </td> <td> 213113_s_at </td> <td> AI630178 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI630178 /FEA=EST /DB_XREF=gi:4681508 /DB_XREF=est:ad06a06.r1 /CLONE=ad06a06 (random) /UG=Hs.274453 hypothetical protein DKFZp762A227 </td> <td> AI630178 </td> <td> solute carrier family 43, member 3 </td> <td> SLC43A3 </td> <td> 29015 </td> <td> NM_001278201 /// NM_001278206 /// NM_014096 /// NM_017611 /// NM_199329 </td> <td> 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -71.83 </td> <td> 226.34 </td> <td> -4.02 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 220495_s_at </td> <td> 220495_s_at </td> <td> NM_024715 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024715.1 /DEF=Homo sapiens hypothetical protein FLJ22625 (FLJ22625), mRNA. /FEA=mRNA /GEN=FLJ22625 /PROD=hypothetical protein FLJ22625 /DB_XREF=gi:13376016 /UG=Hs.106534 hypothetical protein FLJ22625 /FL=gb:NM_024715.1 </td> <td> NM_024715 </td> <td> thioredoxin domain containing 15 </td> <td> TXNDC15 </td> <td> 79770 </td> <td> NM_024715 </td> <td> 0045454 // cell redox homeostasis // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 55.78 </td> <td> 154.21 </td> <td> 4.02 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 207390_s_at </td> <td> 207390_s_at </td> <td> NM_006932 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006932.1 /DEF=Homo sapiens smoothelin (SMTN), mRNA. /FEA=mRNA /GEN=SMTN /PROD=smoothelin /DB_XREF=gi:5902099 /UG=Hs.149098 smoothelin /FL=gb:NM_006932.1 </td> <td> NM_006932 </td> <td> smoothelin </td> <td> SMTN </td> <td> 6525 </td> <td> NM_001207017 /// NM_001207018 /// NM_006932 /// NM_134269 /// NM_134270 /// XM_006724298 /// XM_006724299 /// XM_006724300 /// XM_006724301 /// XM_006724302 /// XM_006724303 /// XM_006724304 /// XM_006724305 /// XM_006724306 /// XM_006724307 /// XR_430410 </td> <td> 0006939 // smooth muscle contraction // traceable author statement /// 0007517 // muscle organ development // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay </td> <td> 0003779 // actin binding // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // traceable author statement </td> <td> 96.40 </td> <td> 194.38 </td> <td> 4.02 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 218710_at </td> <td> 218710_at </td> <td> NM_017735 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017735.1 /DEF=Homo sapiens hypothetical protein FLJ20272 (FLJ20272), mRNA. /FEA=mRNA /GEN=FLJ20272 /PROD=hypothetical protein FLJ20272 /DB_XREF=gi:8923244 /UG=Hs.26090 hypothetical protein FLJ20272 /FL=gb:BC001248.1 gb:NM_017735.1 </td> <td> NM_017735 </td> <td> tetratricopeptide repeat domain 27 </td> <td> TTC27 </td> <td> 55622 </td> <td> NM_001193509 /// NM_017735 /// XM_005264416 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -51.90 </td> <td> 144.80 </td> <td> -4.02 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 207253_s_at </td> <td> 207253_s_at </td> <td> NM_016936 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016936.1 /DEF=Homo sapiens ubinuclein 1 (UBN1), mRNA. /FEA=mRNA /GEN=UBN1 /PROD=ubinuclein 1 /DB_XREF=gi:9055373 /UG=Hs.21479 ubinuclein 1 /FL=gb:AF108460.1 gb:NM_016936.1 </td> <td> NM_016936 </td> <td> ubinuclein 1 </td> <td> UBN1 </td> <td> 29855 </td> <td> NM_001079514 /// NM_001288656 /// NM_016936 /// XM_005255277 /// XM_005255278 /// XM_005255279 /// XM_005255280 /// XM_005255283 </td> <td> 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0016605 // PML body // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 43.02 </td> <td> 87.84 </td> <td> 4.02 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201330_at </td> <td> 201330_at </td> <td> NM_002887 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002887.1 /DEF=Homo sapiens arginyl-tRNA synthetase (RARS), mRNA. /FEA=mRNA /GEN=RARS /PROD=arginyl-tRNA synthetase /DB_XREF=gi:4506428 /UG=Hs.180832 arginyl-tRNA synthetase /FL=gb:BC000528.1 gb:NM_002887.1 </td> <td> NM_002887 </td> <td> arginyl-tRNA synthetase </td> <td> RARS </td> <td> 5917 </td> <td> NM_002887 /// XM_005265957 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006420 // arginyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0017101 // aminoacyl-tRNA synthetase multienzyme complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004814 // arginine-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0034618 // arginine binding // inferred from electronic annotation </td> <td> 132.35 </td> <td> 409.23 </td> <td> 4.02 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201095_at </td> <td> 201095_at </td> <td> NM_004394 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004394.1 /DEF=Homo sapiens death-associated protein (DAP), mRNA. /FEA=mRNA /GEN=DAP /PROD=death-associated protein /DB_XREF=gi:4758119 /UG=Hs.75189 death-associated protein /FL=gb:BC002726.1 gb:NM_004394.1 </td> <td> NM_004394 </td> <td> death-associated protein </td> <td> DAP </td> <td> 1611 </td> <td> NM_001291963 /// NM_004394 </td> <td> 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from genetic interaction /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0010507 // negative regulation of autophagy // inferred from mutant phenotype /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0034198 // cellular response to amino acid starvation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0097190 // apoptotic signaling pathway // inferred from mutant phenotype </td> <td>  </td> <td> 0070513 // death domain binding // inferred from physical interaction </td> <td> 104.97 </td> <td> 282.54 </td> <td> 4.01 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 201002_s_at </td> <td> 201002_s_at </td> <td> U39361 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U39361.1 /DEF=Homo sapiens DNA-binding protein (CROC-1B) mRNA, complete cds. /FEA=mRNA /GEN=CROC-1B /PROD=DNA-binding protein /DB_XREF=gi:1066081 /UG=Hs.75875 ubiquitin-conjugating enzyme E2 variant 1 /FL=gb:U39361.1 gb:NM_003349.2 gb:BC000468.1 </td> <td> U39361 </td> <td> transmembrane protein 189 /// TMEM189-UBE2V1 readthrough /// ubiquitin-conjugating enzyme E2 variant 1 /// ubiquitin-conjugating enzyme E2 variant 2 </td> <td> TMEM189 /// TMEM189-UBE2V1 /// UBE2V1 /// UBE2V2 </td> <td> 7335 /// 7336 /// 387521 /// 387522 </td> <td> NM_001032288 /// NM_001162505 /// NM_001257393 /// NM_001257394 /// NM_001257395 /// NM_001257396 /// NM_001257397 /// NM_001257398 /// NM_001257399 /// NM_001282575 /// NM_001282576 /// NM_001282577 /// NM_001282578 /// NM_001282579 /// NM_001282580 /// NM_003349 /// NM_003350 /// NM_021988 /// NM_022442 /// NM_199129 /// NM_199144 /// NM_199203 /// NR_027889 /// NR_047554 /// NR_104218 /// XM_005251300 </td> <td> 0000209 // protein polyubiquitination // traceable author statement /// 0000729 // DNA double-strand break processing // inferred from mutant phenotype /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0006282 // regulation of DNA repair // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045739 // positive regulation of DNA repair // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051965 // positive regulation of synapse assembly // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031371 // ubiquitin conjugating enzyme complex // inferred from direct assay /// 0031372 // UBC13-MMS2 complex // inferred from direct assay /// 0035370 // UBC13-UEV1A complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> 141.68 </td> <td> 612.76 </td> <td> 4.01 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 44783_s_at </td> <td> 44783_s_at </td> <td> R61374 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. R61374:yh15e02.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-37665 /clone_end=3' /gb=R61374 /gi=832069 /ug=Hs.234434 /len=434 </td> <td> R61374 </td> <td> hes-related family bHLH transcription factor with YRPW motif 1 </td> <td> HEY1 </td> <td> 23462 </td> <td> NM_001040708 /// NM_001282851 /// NM_012258 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001525 // angiogenesis // inferred from expression pattern /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0003184 // pulmonary valve morphogenesis // inferred from sequence or structural similarity /// 0003190 // atrioventricular valve formation // inferred from sequence or structural similarity /// 0003198 // epithelial to mesenchymal transition involved in endocardial cushion formation // inferred from sequence or structural similarity /// 0003199 // endocardial cushion to mesenchymal transition involved in heart valve formation // inferred from electronic annotation /// 0003203 // endocardial cushion morphogenesis // inferred from sequence or structural similarity /// 0003208 // cardiac ventricle morphogenesis // inferred from sequence or structural similarity /// 0003222 // ventricular trabecula myocardium morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009948 // anterior/posterior axis specification // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0035912 // dorsal aorta morphogenesis // inferred from sequence or structural similarity /// 0036304 // umbilical cord morphogenesis // inferred from sequence or structural similarity /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0060347 // heart trabecula formation // inferred from sequence or structural similarity /// 0060411 // cardiac septum morphogenesis // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060716 // labyrinthine layer blood vessel development // inferred from sequence or structural similarity /// 0060840 // artery development // inferred from electronic annotation /// 0060842 // arterial endothelial cell differentiation // inferred from sequence or structural similarity /// 0061314 // Notch signaling involved in heart development // inferred by curator /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation /// 2000678 // negative regulation of transcription regulatory region DNA binding // inferred from direct assay /// 2000820 // negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation // inferred from direct assay /// 2001212 // regulation of vasculogenesis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from sequence or structural similarity </td> <td> 0000983 // RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0000988 // protein binding transcription factor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // non-traceable author statement /// 0035939 // microsatellite binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -42.15 </td> <td> 109.47 </td> <td> -4.01 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209795_at </td> <td> 209795_at </td> <td> L07555 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L07555.1 /DEF=Homo sapiens early activation antigen CD69 mRNA, complete cds. /FEA=mRNA /PROD=early activation antigen CD69 /DB_XREF=gi:291897 /UG=Hs.82401 CD69 antigen (p60, early T-cell activation antigen) /FL=gb:L07555.1 gb:NM_001781.1 </td> <td> L07555 </td> <td> CD69 molecule </td> <td> CD69 </td> <td> 969 </td> <td> NM_001781 /// NR_026671 /// NR_026672 </td> <td> 0007165 // signal transduction // traceable author statement /// 0035690 // cellular response to drug // inferred from electronic annotation </td> <td> 0005887 // integral component of plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> -40.65 </td> <td> 33.00 </td> <td> -4.01 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 209585_s_at </td> <td> 209585_s_at </td> <td> AF084943 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF084943.1 /DEF=Homo sapiens multiple inositol polyphosphate phosphatase mRNA, complete cds.  /FEA=mRNA /PROD=multiple inositol polyphosphate phosphatase /DB_XREF=gi:4191339 /UG=Hs.95907 multiple inositol polyphosphate phosphatase 1 /FL=gb:AF046914.1 gb:AF084943.1 gb:NM_004897.1 </td> <td> AF084943 </td> <td> multiple inositol-polyphosphate phosphatase 1 </td> <td> MINPP1 </td> <td> 9562 </td> <td> NM_001178117 /// NM_001178118 /// NM_004897 /// XM_006718078 </td> <td> 0001503 // ossification // non-traceable author statement /// 0006797 // polyphosphate metabolic process // traceable author statement /// 0016311 // dephosphorylation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0030282 // bone mineralization // non-traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003993 // acid phosphatase activity // inferred from electronic annotation /// 0004446 // inositol-hexakisphosphate phosphatase activity // inferred from electronic annotation /// 0008969 // phosphohistidine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0034417 // bisphosphoglycerate 3-phosphatase activity // inferred from direct assay /// 0052826 // inositol hexakisphosphate 2-phosphatase activity // inferred from electronic annotation </td> <td> 36.42 </td> <td> 115.54 </td> <td> 4.01 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202620_s_at </td> <td> 202620_s_at </td> <td> NM_000935 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000935.1 /DEF=Homo sapiens procollagen-lysine, 2-oxoglutarate 5-dioxygenase (lysine hydroxylase) 2 (PLOD2), mRNA.  /FEA=mRNA /GEN=PLOD2 /PROD=procollagen-lysine, 2-oxoglutarate 5-dioxygenase(lysine hydroxylase) 2 /DB_XREF=gi:4505888 /UG=Hs.41270 procollagen-lysine, 2-oxoglutarate 5-dioxygenase (lysine hydroxylase) 2 /FL=gb:U84573.1 gb:NM_000935.1 </td> <td> NM_000935 </td> <td> procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 </td> <td> PLOD2 </td> <td> 5352 </td> <td> NM_000935 /// NM_182943 /// XM_005247535 /// XM_005247536 </td> <td> 0001666 // response to hypoxia // inferred from expression pattern /// 0006464 // cellular protein modification process // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005581 // collagen trimer // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030867 // rough endoplasmic reticulum membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005506 // iron ion binding // inferred from electronic annotation /// 0008475 // procollagen-lysine 5-dioxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -217.72 </td> <td> 770.09 </td> <td> -4.01 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203341_at </td> <td> 203341_at </td> <td> NM_005760 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005760.1 /DEF=Homo sapiens CCAAT-box-binding transcription factor (CBF2), mRNA. /FEA=mRNA /GEN=CBF2 /PROD=CCAAT-box-binding transcription factor /DB_XREF=gi:5031624 /UG=Hs.184760 CCAAT-box-binding transcription factor /FL=gb:M37197.1 gb:NM_005760.1 </td> <td> NM_005760 </td> <td> CCAAT/enhancer binding protein (C/EBP), zeta </td> <td> CEBPZ </td> <td> 10153 </td> <td> NM_005760 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 34.10 </td> <td> 75.72 </td> <td> 4.00 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 219256_s_at </td> <td> 219256_s_at </td> <td> NM_018986 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018986.1 /DEF=Homo sapiens hypothetical protein (FLJ20356), mRNA. /FEA=mRNA /GEN=FLJ20356 /PROD=hypothetical protein /DB_XREF=gi:9506676 /UG=Hs.61053 hypothetical protein /FL=gb:NM_018986.1 </td> <td> NM_018986 </td> <td> SH3 domain and tetratricopeptide repeats 1 </td> <td> SH3TC1 </td> <td> 54436 </td> <td> NM_018986 /// XM_005247974 /// XM_006713888 /// XM_006713889 /// XM_006713890 /// XM_006713891 /// XR_241652 /// XR_427478 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -61.90 </td> <td> 249.47 </td> <td> -4.00 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 206861_s_at </td> <td> 206861_s_at </td> <td> NM_003663 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003663.1 /DEF=Homo sapiens CGG triplet repeat binding protein 1 (CGGBP1), mRNA. /FEA=mRNA /GEN=CGGBP1 /PROD=CGG triplet repeat binding protein 1 /DB_XREF=gi:4502790 /UG=Hs.86041 CGG triplet repeat binding protein 1 /FL=gb:NM_003663.1 </td> <td> NM_003663 </td> <td> CGG triplet repeat binding protein 1 </td> <td> CGGBP1 </td> <td> 8545 </td> <td> NM_001008390 /// NM_001195308 /// NM_003663 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from mutant phenotype /// 0001227 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001227 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement </td> <td> -57.13 </td> <td> 243.79 </td> <td> -4.00 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212186_at </td> <td> 212186_at </td> <td> BE855983 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE855983 /FEA=EST /DB_XREF=gi:10368561 /DB_XREF=est:7f85g11.x1 /CLONE=IMAGE:3303812 /UG=Hs.7232 acetyl-Coenzyme A carboxylase alpha /FL=gb:NM_000664.1 gb:U19822.1 </td> <td> BE855983 </td> <td> acetyl-CoA carboxylase alpha </td> <td> ACACA </td> <td> 31 </td> <td> NM_000664 /// NM_198834 /// NM_198835 /// NM_198836 /// NM_198837 /// NM_198838 /// NM_198839 /// XM_005257266 /// XM_005257267 /// XM_005257268 /// XM_006721853 /// XM_006725320 /// XM_006725321 /// XM_006725322 /// XR_424818 /// XR_429952 /// XR_430795 /// XR_433374 </td> <td> 0001894 // tissue homeostasis // inferred from electronic annotation /// 0006084 // acetyl-CoA metabolic process // inferred from sequence or structural similarity /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from sequence or structural similarity /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006768 // biotin metabolic process // traceable author statement /// 0006853 // carnitine shuttle // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0031325 // positive regulation of cellular metabolic process // traceable author statement /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044268 // multicellular organismal protein metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from sequence or structural similarity /// 0055088 // lipid homeostasis // inferred from electronic annotation /// 2001295 // malonyl-CoA biosynthetic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003989 // acetyl-CoA carboxylase activity // inferred from sequence or structural similarity /// 0003989 // acetyl-CoA carboxylase activity // traceable author statement /// 0004075 // biotin carboxylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 84.62 </td> <td> 62.79 </td> <td> 4.00 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212730_at </td> <td> 212730_at </td> <td> AK026420 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026420.1 /DEF=Homo sapiens cDNA: FLJ22767 fis, clone KAIA1191. /FEA=mRNA /DB_XREF=gi:10439281 /UG=Hs.10587 KIAA0353 protein </td> <td> AK026420 </td> <td> synemin, intermediate filament protein </td> <td> SYNM </td> <td> 23336 </td> <td> NM_015286 /// NM_145728 </td> <td> 0045104 // intermediate filament cytoskeleton organization // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from direct assay /// 0005882 // intermediate filament // non-traceable author statement /// 0005912 // adherens junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043034 // costamere // inferred from direct assay /// 0060053 // neurofilament cytoskeleton // traceable author statement </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // inferred from direct assay /// 0017166 // vinculin binding // inferred from direct assay /// 0019215 // intermediate filament binding // inferred from sequence or structural similarity </td> <td> 32.40 </td> <td> 44.58 </td> <td> 3.99 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 213275_x_at </td> <td> 213275_x_at </td> <td> W47179 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W47179 /FEA=EST /DB_XREF=gi:1332046 /DB_XREF=est:zc34d07.s1 /CLONE=IMAGE:324205 /UG=Hs.297939 cathepsin B </td> <td> W47179 </td> <td> cathepsin B </td> <td> CTSB </td> <td> 1508 </td> <td> NM_001908 /// NM_147780 /// NM_147781 /// NM_147782 /// NM_147783 /// XM_006716244 /// XM_006716245 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0006508 // proteolysis // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from direct assay /// 0030574 // collagen catabolic process // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0042981 // regulation of apoptotic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from expression pattern </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005622 // intracellular // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0036021 // endolysosome lumen // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008233 // peptidase activity // inferred from direct assay /// 0008234 // cysteine-type peptidase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043394 // proteoglycan binding // inferred from physical interaction </td> <td> 170.65 </td> <td> 413.85 </td> <td> 3.99 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 204176_at </td> <td> 204176_at </td> <td> AA808694 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA808694 /FEA=EST /DB_XREF=gi:2878100 /DB_XREF=est:oa47b08.s1 /CLONE=IMAGE:1308087 /UG=Hs.106290 Kelch motif containing protein /FL=gb:NM_014458.2 gb:AB026190.1 </td> <td> AA808694 </td> <td> kelch-like family member 20 </td> <td> KLHL20 </td> <td> 27252 </td> <td> NM_014458 /// XM_005245093 /// XM_006711277 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from mutant phenotype /// 0007010 // cytoskeleton organization // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035455 // response to interferon-alpha // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 1990390 // protein K33-linked ubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0015629 // actin cytoskeleton // traceable author statement /// 0016605 // PML body // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019964 // interferon-gamma binding // inferred from direct assay </td> <td> 34.48 </td> <td> 42.91 </td> <td> 3.99 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212666_at </td> <td> 212666_at </td> <td> AB046845 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB046845.1 /DEF=Homo sapiens mRNA for KIAA1625 protein, partial cds. /FEA=mRNA /GEN=KIAA1625 /PROD=KIAA1625 protein /DB_XREF=gi:10047326 /UG=Hs.119120 E3 ubiquitin ligase SMURF1 </td> <td> AB046845 </td> <td> SMAD specific E3 ubiquitin protein ligase 1 </td> <td> SMURF1 </td> <td> 57154 </td> <td> NM_001199847 /// NM_020429 /// NM_181349 /// XM_005250507 /// XM_006716061 /// XM_006716062 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006611 // protein export from nucleus // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007398 // ectoderm development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030154 // cell differentiation // inferred from direct assay /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030514 // negative regulation of BMP signaling pathway // traceable author statement /// 0030579 // ubiquitin-dependent SMAD protein catabolic process // inferred from direct assay /// 0032801 // receptor catabolic process // inferred from direct assay /// 0034394 // protein localization to cell surface // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay </td> <td> 0005634 // nucleus // not recorded /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0048185 // activin binding // non-traceable author statement /// 0070411 // I-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction </td> <td> -44.13 </td> <td> 118.09 </td> <td> -3.99 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 214224_s_at </td> <td> 214224_s_at </td> <td> BE674061 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE674061 /FEA=EST /DB_XREF=gi:10034602 /DB_XREF=est:7d74a04.x1 /CLONE=IMAGE:3278670 /UG=Hs.11774 protein (peptidyl-prolyl cistrans isomerase) NIMA-interacting, 4 (parvulin) </td> <td> BE674061 </td> <td> protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) </td> <td> PIN4 </td> <td> 5303 </td> <td> NM_001170747 /// NM_006223 /// NR_033187 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006457 // protein folding // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030684 // preribosome // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003681 // bent DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 64.33 </td> <td> 123.44 </td> <td> 3.99 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203128_at </td> <td> 203128_at </td> <td> NM_004863 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004863.1 /DEF=Homo sapiens serine palmitoyltransferase, long chain base subunit 2 (SPTLC2), mRNA.  /FEA=mRNA /GEN=SPTLC2 /PROD=serine palmitoyltransferase, long chain basesubunit 2 /DB_XREF=gi:4758667 /UG=Hs.59403 serine palmitoyltransferase, long chain base subunit 2 /FL=gb:BC005123.1 gb:AB011098.1 gb:NM_004863.1 </td> <td> NM_004863 </td> <td> serine palmitoyltransferase, long chain base subunit 2 </td> <td> SPTLC2 </td> <td> 9517 </td> <td> NM_004863 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006686 // sphingomyelin biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046511 // sphinganine biosynthetic process // inferred from electronic annotation /// 0046512 // sphingosine biosynthetic process // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0017059 // serine C-palmitoyltransferase complex // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation </td> <td> 43.80 </td> <td> 28.35 </td> <td> 3.98 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 203567_s_at </td> <td> 203567_s_at </td> <td> AU157590 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU157590 /FEA=EST /DB_XREF=gi:11019111 /DB_XREF=est:AU157590 /CLONE=PLACE1008438 /UG=Hs.59545 ring finger protein 15 /FL=gb:U90547.1 gb:NM_006355.1 </td> <td> AU157590 </td> <td> tripartite motif containing 38 </td> <td> TRIM38 </td> <td> 10475 </td> <td> NM_006355 /// XM_005248799 /// XM_005248800 /// XR_241880 </td> <td> 0007165 // signal transduction // inferred from mutant phenotype /// 0032648 // regulation of interferon-beta production // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0045070 // positive regulation of viral genome replication // inferred from electronic annotation /// 0046598 // positive regulation of viral entry into host cell // inferred from direct assay /// 0050687 // negative regulation of defense response to virus // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 52.88 </td> <td> 90.71 </td> <td> 3.98 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 214448_x_at </td> <td> 214448_x_at </td> <td> NM_002503 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_002503.1 /DEF=Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta (NFKBIB), mRNA.  /FEA=CDS /GEN=NFKBIB /PROD=nuclear factor of kappa light polypeptide geneenhancer in B-cells inhibitor, beta /DB_XREF=gi:4505384 /UG=Hs.9731 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta /FL=gb:NM_002503.1 </td> <td> NM_002503 </td> <td> nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta </td> <td> NFKBIB </td> <td> 4793 </td> <td> NM_001001716 /// NM_001243116 /// NM_002503 /// NR_040515 /// XM_006723226 /// XM_006723227 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003713 // transcription coactivator activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -43.12 </td> <td> 49.64 </td> <td> -3.98 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 212205_at </td> <td> 212205_at </td> <td> AA534860 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA534860 /FEA=EST /DB_XREF=gi:2279113 /DB_XREF=est:nf82a04.s1 /CLONE=IMAGE:926382 /UG=Hs.301005 purine-rich element binding protein B </td> <td> AA534860 </td> <td> H2A histone family, member V </td> <td> H2AFV </td> <td> 94239 </td> <td> NM_012412 /// NM_138635 /// NM_201436 /// NM_201516 /// NM_201517 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation </td> <td> 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 95.43 </td> <td> 261.54 </td> <td> 3.98 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 202147_s_at </td> <td> 202147_s_at </td> <td> NM_001550 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001550.1 /DEF=Homo sapiens interferon-related developmental regulator 1 (IFRD1), mRNA.  /FEA=mRNA /GEN=IFRD1 /PROD=interferon-related developmental regulator 1 /DB_XREF=gi:4504606 /UG=Hs.7879 interferon-related developmental regulator 1 /FL=gb:BC001272.1 gb:NM_001550.1 </td> <td> NM_001550 </td> <td> interferon-related developmental regulator 1 </td> <td> IFRD1 </td> <td> 3475 </td> <td> NM_001007245 /// NM_001197079 /// NM_001197080 /// NM_001550 /// NR_120333 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007518 // myoblast fate determination // traceable author statement /// 0007527 // adult somatic muscle development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation </td> <td> -82.90 </td> <td> 105.03 </td> <td> -3.98 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.47 </td> </tr>
  <tr> <td> 214441_at </td> <td> 214441_at </td> <td> NM_005819 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_005819.1 /DEF=Homo sapiens syntaxin 6 (STX6), mRNA. /FEA=CDS /GEN=STX6 /PROD=syntaxin 6 /DB_XREF=gi:5032130 /UG=Hs.157144 syntaxin 6 /FL=gb:AJ002078.1 gb:NM_005819.1 </td> <td> NM_005819 </td> <td> syntaxin 6 </td> <td> STX6 </td> <td> 10228 </td> <td> NM_001286210 /// NM_005819 /// XM_005244824 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // not recorded /// 0006906 // vesicle fusion // inferred from physical interaction /// 0007032 // endosome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048193 // Golgi vesicle transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // not recorded /// 0030136 // clathrin-coated vesicle // traceable author statement /// 0031201 // SNARE complex // inferred from direct assay /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005484 // SNAP receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction </td> <td> -41.75 </td> <td> 65.12 </td> <td> -3.98 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213112_s_at </td> <td> 213112_s_at </td> <td> N30649 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N30649 /FEA=EST /DB_XREF=gi:1149169 /DB_XREF=est:yw77b03.s1 /CLONE=IMAGE:258221 /UG=Hs.279891 truncated calcium binding protein </td> <td> N30649 </td> <td> sequestosome 1 </td> <td> SQSTM1 </td> <td> 8878 </td> <td> NM_001142298 /// NM_001142299 /// NM_003900 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006914 // autophagy // inferred from mutant phenotype /// 0006914 // autophagy // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0008104 // protein localization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0016236 // macroautophagy // inferred from sequence or structural similarity /// 0016239 // positive regulation of macroautophagy // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043122 // regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0046578 // regulation of Ras protein signal transduction // non-traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0000407 // pre-autophagosomal structure // inferred from electronic annotation /// 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016234 // inclusion body // inferred from direct assay /// 0016235 // aggresome // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0030971 // receptor tyrosine kinase binding // traceable author statement /// 0042169 // SH2 domain binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070530 // K63-linked polyubiquitin binding // inferred from electronic annotation </td> <td> -38.35 </td> <td> 24.85 </td> <td> -3.98 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202795_x_at </td> <td> 202795_x_at </td> <td> NM_007032 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007032.1 /DEF=Homo sapiens putative nuclear protein (HRIHFB2122), mRNA. /FEA=mRNA /GEN=HRIHFB2122 /PROD=putative nuclear protein /DB_XREF=gi:10334853 /UG=Hs.40342 putative nuclear protein /FL=gb:NM_007032.1 </td> <td> NM_007032 </td> <td> TRIO and F-actin binding protein </td> <td> TRIOBP </td> <td> 11078 </td> <td> NM_001039141 /// NM_007032 /// NM_138632 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0030047 // actin modification // non-traceable author statement /// 0051016 // barbed-end actin filament capping // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // non-traceable author statement /// 0030496 // midbody // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017049 // GTP-Rho binding // non-traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0045159 // myosin II binding // non-traceable author statement /// 0051015 // actin filament binding // inferred from direct assay </td> <td> 58.35 </td> <td> 161.12 </td> <td> 3.98 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204194_at </td> <td> 204194_at </td> <td> NM_001186 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001186.1 /DEF=Homo sapiens BTB and CNC homology 1, basic leucine zipper transcription factor 1 (BACH1), mRNA.  /FEA=mRNA /GEN=BACH1 /PROD=BTB and CNC homology 1, basic leucine zippertranscription factor 1 /DB_XREF=gi:4502352 /UG=Hs.154276 BTB and CNC homology 1, basic leucine zipper transcription factor 1 /FL=gb:AB002803.1 gb:NM_001186.1 </td> <td> NM_001186 </td> <td> BTB and CNC homology 1, basic leucine zipper transcription factor 1 </td> <td> BACH1 </td> <td> 571 </td> <td> NM_001011545 /// NM_001186 /// NM_206866 /// NR_027655 /// XM_005261012 /// XM_005261013 /// XM_005261014 /// XM_006724034 /// XR_430352 /// XR_430353 /// XR_430354 </td> <td> 0000083 // regulation of transcription involved in G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0000117 // regulation of transcription involved in G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay </td> <td> 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from electronic annotation /// 0020037 // heme binding // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -122.80 </td> <td> 120.80 </td> <td> -3.98 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209787_s_at </td> <td> 209787_s_at </td> <td> BC001282 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001282.1 /DEF=Homo sapiens, high-mobility group (nonhistone chromosomal) protein 17-like 3, clone MGC:5145, mRNA, complete cds.  /FEA=mRNA /PROD=high-mobility group (nonhistone chromosomal)protein 17-like 3 /DB_XREF=gi:12654876 /UG=Hs.236774 high-mobility group (nonhistone chromosomal) protein 17-like 3 /FL=gb:BC001282.1 </td> <td> BC001282 </td> <td> high mobility group nucleosomal binding domain 4 </td> <td> HMGN4 </td> <td> 10473 </td> <td> NM_006353 </td> <td>  </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from electronic annotation </td> <td> 55.75 </td> <td> 202.00 </td> <td> 3.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 207805_s_at </td> <td> 207805_s_at </td> <td> NM_002813 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002813.1 /DEF=Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 (PSMD9), mRNA.  /FEA=mRNA /GEN=PSMD9 /PROD=proteasome (prosome, macropain) 26S subunit,non-ATPase, 9 /DB_XREF=gi:4506234 /UG=Hs.5648 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 /FL=gb:AB003177.1 gb:NM_002813.1 </td> <td> NM_002813 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 </td> <td> PSMD9 </td> <td> 5715 </td> <td> NM_001261400 /// NM_002813 /// NR_048555 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0046676 // negative regulation of insulin secretion // inferred from sequence or structural similarity /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070682 // proteasome regulatory particle assembly // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005838 // proteasome regulatory particle // non-traceable author statement /// 0008540 // proteasome regulatory particle, base subcomplex // inferred from direct assay </td> <td> 0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0043425 // bHLH transcription factor binding // inferred from sequence or structural similarity </td> <td> 77.05 </td> <td> 261.88 </td> <td> 3.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209115_at </td> <td> 209115_at </td> <td> AL117566 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL117566.1 /DEF=Homo sapiens mRNA; cDNA DKFZp566J164 (from clone DKFZp566J164); complete cds.  /FEA=mRNA /GEN=DKFZp566J164 /PROD=hypothetical protein /DB_XREF=gi:5912116 /UG=Hs.154320 ubiquitin-activating enzyme E1C (homologous to yeast UBA3) /FL=gb:AF046024.1 gb:AB012190.1 gb:NM_003968.1 gb:AL117566.1 </td> <td> AL117566 </td> <td> ubiquitin-like modifier activating enzyme 3 </td> <td> UBA3 </td> <td> 9039 </td> <td> NM_003968 /// NM_198195 /// NM_198197 </td> <td> 0000278 // mitotic cell cycle // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007113 // endomitotic cell cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0045116 // protein neddylation // not recorded /// 0045116 // protein neddylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // not recorded </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008641 // small protein activating enzyme activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from electronic annotation /// 0019781 // NEDD8 activating enzyme activity // not recorded /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> 57.35 </td> <td> 161.40 </td> <td> 3.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203188_at </td> <td> 203188_at </td> <td> NM_006876 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006876.1 /DEF=Homo sapiens i-beta-1,3-N-acetylglucosaminyltransferase (BETA3GNTI), mRNA.  /FEA=mRNA /GEN=BETA3GNTI /PROD=i-beta-1,3-N-acetylglucosaminyltransferase /DB_XREF=gi:5802983 /UG=Hs.8526 i-beta-1,3-N-acetylglucosaminyltransferase /FL=gb:AF029893.1 gb:NM_006876.1 </td> <td> NM_006876 </td> <td> UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1 </td> <td> B3GNT1 </td> <td> 11041 </td> <td> NM_006876 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0018146 // keratan sulfate biosynthetic process // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030311 // poly-N-acetyllactosamine biosynthetic process // inferred from direct assay /// 0042339 // keratan sulfate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030173 // integral component of Golgi membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008532 // N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> 38.12 </td> <td> 107.89 </td> <td> 3.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 219209_at </td> <td> 219209_at </td> <td> NM_022168 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022168.1 /DEF=Homo sapiens melanoma differentiation associated protein-5 (MDA5), mRNA.  /FEA=mRNA /GEN=MDA5 /PROD=melanoma differentiation associated protein-5 /DB_XREF=gi:11545921 /UG=Hs.293591 melanoma differentiation associated protein-5 /FL=gb:AF095844.1 gb:NM_022168.1 gb:AY017378.1 </td> <td> NM_022168 </td> <td> interferon induced with helicase C domain 1 </td> <td> IFIH1 </td> <td> 64135 </td> <td> NM_022168 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009597 // detection of virus // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032727 // positive regulation of interferon-alpha production // inferred from mutant phenotype /// 0032727 // positive regulation of interferon-alpha production // traceable author statement /// 0032728 // positive regulation of interferon-beta production // inferred from mutant phenotype /// 0032728 // positive regulation of interferon-beta production // traceable author statement /// 0034344 // regulation of type III interferon production // traceable author statement /// 0039528 // cytoplasmic pattern recognition receptor signaling pathway in response to virus // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0051607 // defense response to virus // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // traceable author statement /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0043021 // ribonucleoprotein complex binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -35.10 </td> <td> 19.98 </td> <td> -3.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202481_at </td> <td> 202481_at </td> <td> NM_004753 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004753.1 /DEF=Homo sapiens short-chain dehydrogenasereductase 1 (SDR1), mRNA. /FEA=mRNA /GEN=SDR1 /PROD=short-chain dehydrogenasereductase 1 /DB_XREF=gi:4759083 /UG=Hs.17144 short-chain dehydrogenasereductase 1 /FL=gb:BC002730.1 gb:AF061741.1 gb:NM_004753.1 </td> <td> NM_004753 </td> <td> dehydrogenase/reductase (SDR family) member 3 </td> <td> DHRS3 </td> <td> 9249 </td> <td> NM_004753 /// XM_005263533 /// XM_005263534 /// XM_006711036 </td> <td> 0001523 // retinoid metabolic process // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0042572 // retinol metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0042622 // photoreceptor outer segment membrane // traceable author statement </td> <td> 0000166 // nucleotide binding // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0052650 // NADP-retinol dehydrogenase activity // inferred from electronic annotation </td> <td> -45.52 </td> <td> 67.94 </td> <td> -3.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 211698_at </td> <td> 211698_at </td> <td> AF349444 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF349444.1 /DEF=Homo sapiens Rb- and p300-binding protein EID-1 mRNA, complete cds. /FEA=mRNA /PROD=Rb- and p300-binding protein EID-1 /DB_XREF=gi:13549113 /FL=gb:AF349444.1 </td> <td> AF349444 </td> <td> EP300 interacting inhibitor of differentiation 1 </td> <td> EID1 </td> <td> 23741 </td> <td> NM_014335 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from direct assay /// 0035065 // regulation of histone acetylation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from physical interaction /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0035034 // histone acetyltransferase regulator activity // inferred from direct assay /// 0035035 // histone acetyltransferase binding // inferred from direct assay </td> <td> 132.92 </td> <td> 150.89 </td> <td> 3.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218603_at </td> <td> 218603_at </td> <td> NM_016217 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016217.1 /DEF=Homo sapiens hHDC for homolog of Drosophila headcase (LOC51696), mRNA.  /FEA=mRNA /GEN=LOC51696 /PROD=hHDC for homolog of Drosophila headcase /DB_XREF=gi:7706434 /UG=Hs.6679 hHDC for homolog of Drosophila headcase /FL=gb:AB033492.1 gb:NM_016217.1 </td> <td> NM_016217 </td> <td> headcase homolog (Drosophila) </td> <td> HECA </td> <td> 51696 </td> <td> NM_016217 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030323 // respiratory tube development // non-traceable author statement </td> <td> 0016020 // membrane // inferred from direct assay </td> <td>  </td> <td> -41.05 </td> <td> 152.88 </td> <td> -3.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209236_at </td> <td> 209236_at </td> <td> AL389886 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL389886 /DEF=Human DNA sequence from clone RP1-237C24 on chromosome 20 Contains the 3 end of the SLC23A1 gene encoding solute carrier family 23 member1 (nucleobase transporters), ESTs, STSs and GSSs /FEA=mRNA /DB_XREF=gi:10086152 /UG=Hs.82042 solute carrier family 23 (nucleobase transporters), member 1 /FL=gb:AF058319.1 gb:NM_005116.1 gb:AF164142.1 </td> <td> AL389886 </td> <td> solute carrier family 23 (ascorbic acid transporter), member 2 </td> <td> SLC23A2 </td> <td> 9962 </td> <td> NM_005116 /// NM_203327 /// XM_005260904 /// XM_006723671 </td> <td> 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0015851 // nucleobase transport // traceable author statement /// 0015882 // L-ascorbic acid transport // inferred from direct assay /// 0015993 // molecular hydrogen transport // non-traceable author statement /// 0019852 // L-ascorbic acid metabolic process // non-traceable author statement /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0035461 // vitamin transmembrane transport // inferred from direct assay /// 0035461 // vitamin transmembrane transport // inferred from electronic annotation /// 0035461 // vitamin transmembrane transport // non-traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070904 // transepithelial L-ascorbic acid transport // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // non-traceable author statement /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0008520 // L-ascorbate:sodium symporter activity // inferred from electronic annotation /// 0008523 // sodium-dependent multivitamin transmembrane transporter activity // non-traceable author statement /// 0015205 // nucleobase transmembrane transporter activity // traceable author statement /// 0015229 // L-ascorbic acid transporter activity // inferred from direct assay /// 0015293 // symporter activity // inferred from electronic annotation /// 0070890 // sodium-dependent L-ascorbate transmembrane transporter activity // inferred from direct assay </td> <td> 37.73 </td> <td> 70.19 </td> <td> 3.97 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200676_s_at </td> <td> 200676_s_at </td> <td> NM_003347 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003347.1 /DEF=Homo sapiens ubiquitin-conjugating enzyme E2L 3 (UBE2L3), mRNA. /FEA=mRNA /GEN=UBE2L3 /PROD=ubiquitin-conjugating enzyme E2L 3 /DB_XREF=gi:4507788 /UG=Hs.108104 ubiquitin-conjugating enzyme E2L 3 /FL=gb:NM_003347.1 </td> <td> NM_003347 </td> <td> ubiquitin-conjugating enzyme E2L 3 </td> <td> UBE2L3 </td> <td> 7332 </td> <td> NM_001256355 /// NM_001256356 /// NM_003347 /// NM_198157 /// NR_028436 /// NR_046082 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0071383 // cellular response to steroid hormone stimulus // inferred from mutant phenotype /// 0071385 // cellular response to glucocorticoid stimulus // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 38.95 </td> <td> 81.97 </td> <td> 3.96 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208965_s_at </td> <td> 208965_s_at </td> <td> BG256677 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG256677 /FEA=EST /DB_XREF=gi:12766493 /DB_XREF=est:602370865F1 /CLONE=IMAGE:4478872 /UG=Hs.155530 interferon, gamma-inducible protein 16 /FL=gb:AF208043.1 </td> <td> BG256677 </td> <td> interferon, gamma-inducible protein 16 </td> <td> IFI16 </td> <td> 3428 </td> <td> NM_001206567 /// NM_005531 /// XM_005245127 /// XM_006711290 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001819 // positive regulation of cytokine production // traceable author statement /// 0002218 // activation of innate immune response // inferred from direct assay /// 0002376 // immune system process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0009615 // response to virus // non-traceable author statement /// 0010506 // regulation of autophagy // inferred from expression pattern /// 0030097 // hemopoiesis // non-traceable author statement /// 0030099 // myeloid cell differentiation // non-traceable author statement /// 0030224 // monocyte differentiation // inferred from direct assay /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032731 // positive regulation of interleukin-1 beta production // inferred from direct assay /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from direct assay /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045824 // negative regulation of innate immune response // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from mutant phenotype /// 0071479 // cellular response to ionizing radiation // inferred from direct assay /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from mutant phenotype /// 0097202 // activation of cysteine-type endopeptidase activity // inferred from mutant phenotype /// 2000117 // negative regulation of cysteine-type endopeptidase activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -127.25 </td> <td> 258.02 </td> <td> -3.96 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203678_at </td> <td> 203678_at </td> <td> NM_014967 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014967.1 /DEF=Homo sapiens KIAA1018 protein (KIAA1018), mRNA. /FEA=mRNA /GEN=KIAA1018 /PROD=KIAA1018 protein /DB_XREF=gi:7662449 /UG=Hs.5400 KIAA1018 protein /FL=gb:AB023235.1 gb:NM_014967.1 </td> <td> NM_014967 </td> <td> FANCD2/FANCI-associated nuclease 1 </td> <td> FAN1 </td> <td> 22909 </td> <td> NM_001146094 /// NM_001146095 /// NM_001146096 /// NM_014967 /// XM_005254232 /// XM_005254233 /// XM_005254234 /// XM_005254235 /// XM_005254236 /// XM_006725537 /// XM_006725538 /// XM_006725539 /// XM_006725540 /// XM_006725541 </td> <td> 0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0000737 // DNA catabolic process, endonucleolytic // inferred from direct assay /// 0006281 // DNA repair // inferred from mutant phenotype /// 0006289 // nucleotide-excision repair // inferred from mutant phenotype /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0033683 // nucleotide-excision repair, DNA incision // inferred from direct assay /// 0033683 // nucleotide-excision repair, DNA incision // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004528 // phosphodiesterase I activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008409 // 5'-3' exonuclease activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0017108 // 5'-flap endonuclease activity // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 46.57 </td> <td> 45.99 </td> <td> 3.96 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 214496_x_at </td> <td> 214496_x_at </td> <td> NM_012330 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_012330.1 /DEF=Homo sapiens histone acetyltransferase (MORF), mRNA. /FEA=CDS /GEN=MORF /PROD=histone acetyltransferase /DB_XREF=gi:6912511 /UG=Hs.27590 histone acetyltransferase /FL=gb:AF119231.1 gb:NM_012330.1 </td> <td> NM_012330 </td> <td> K(lysine) acetyltransferase 6B </td> <td> KAT6B </td> <td> 23522 </td> <td> NM_001256468 /// NM_001256469 /// NM_012330 /// XM_005269664 </td> <td> 0006325 // chromatin organization // traceable author statement /// 0006334 // nucleosome assembly // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0070776 // MOZ/MORF histone acetyltransferase complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -39.65 </td> <td> 65.55 </td> <td> -3.96 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209014_at </td> <td> 209014_at </td> <td> AF217963 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF217963.1 /DEF=Homo sapiens NRAGE mRNA, complete cds. /FEA=mRNA /PROD=NRAGE /DB_XREF=gi:9963809 /UG=Hs.177556 melanoma antigen, family D, 1 /FL=gb:AF132205.1 gb:AF124440.1 gb:NM_006986.1 gb:AF217963.1 </td> <td> AF217963 </td> <td> melanoma antigen family D, 1 </td> <td> MAGED1 </td> <td> 9500 </td> <td> NM_001005332 /// NM_001005333 /// NM_006986 </td> <td> 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from direct assay /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement /// 2001235 // positive regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000785 // chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay </td> <td> 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 331.23 </td> <td> 834.39 </td> <td> 3.96 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 217874_at </td> <td> 217874_at </td> <td> NM_003849 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003849.1 /DEF=Homo sapiens succinate-CoA ligase, GDP-forming, alpha subunit (SUCLG1), mRNA.  /FEA=mRNA /GEN=SUCLG1 /PROD=succinate-CoA ligase, GDP-forming, alphasubunit /DB_XREF=gi:11321580 /UG=Hs.7043 succinate-CoA ligase, GDP-forming, alpha subunit /FL=gb:NM_003849.1 gb:BC000504.1 gb:AF104921.2 </td> <td> NM_003849 </td> <td> succinate-CoA ligase, alpha subunit </td> <td> SUCLG1 </td> <td> 8802 </td> <td> NM_003849 </td> <td> 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006104 // succinyl-CoA metabolic process // inferred from electronic annotation /// 0006105 // succinate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0045244 // succinate-CoA ligase complex (GDP-forming) // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003878 // ATP citrate synthase activity // inferred from electronic annotation /// 0004775 // succinate-CoA ligase (ADP-forming) activity // inferred from electronic annotation /// 0004776 // succinate-CoA ligase (GDP-forming) activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation </td> <td> 120.48 </td> <td> 265.19 </td> <td> 3.95 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208970_s_at </td> <td> 208970_s_at </td> <td> M14016 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M14016.1 /DEF=Human uroporphyrinogen decarboxylase mRNA, complete cds. /FEA=mRNA /GEN=UROD /DB_XREF=gi:340180 /UG=Hs.78601 uroporphyrinogen decarboxylase /FL=gb:BC001778.1 gb:M14016.1 gb:AF104421.1 gb:AF104422.1 gb:AF104423.1 gb:AF104424.1 gb:AF104425.1 gb:AF104426.1 gb:AF104427.1 gb:AF104428.1 gb:AF104429.1 gb:AF104430.1 gb:AF104431.1 gb:AF104432.1 gb:AF104433.1 gb:AF104434.1 gb:AF104435.1 gb:AF104436.1 gb:AF104437.1 gb:AF104438.1 gb:AF104439.1 gb:AF104440.1 gb:NM_000374.2 </td> <td> M14016 </td> <td> uroporphyrinogen decarboxylase </td> <td> UROD </td> <td> 7389 </td> <td> NM_000374 /// NR_036510 /// XM_005271169 /// XM_005271170 </td> <td> 0006778 // porphyrin-containing compound metabolic process // traceable author statement /// 0006779 // porphyrin-containing compound biosynthetic process // inferred from electronic annotation /// 0006782 // protoporphyrinogen IX biosynthetic process // inferred from electronic annotation /// 0006783 // heme biosynthetic process // inferred by curator /// 0006783 // heme biosynthetic process // traceable author statement /// 0042168 // heme metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay </td> <td> 0004853 // uroporphyrinogen decarboxylase activity // inferred from direct assay /// 0004853 // uroporphyrinogen decarboxylase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation </td> <td> 77.87 </td> <td> 347.54 </td> <td> 3.95 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202843_at </td> <td> 202843_at </td> <td> NM_012328 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012328.1 /DEF=Homo sapiens microvascular endothelial differentiation gene 1 (MDG1), mRNA.  /FEA=mRNA /GEN=MDG1 /PROD=microvascular endothelial differentiation gene1 /DB_XREF=gi:9558754 /UG=Hs.6790 DnaJ (Hsp40) homolog, subfamily B, member 9 /FL=gb:AF083247.1 gb:AL080081.1 gb:AB026908.1 gb:NM_012328.1 </td> <td> NM_012328 </td> <td> DnaJ (Hsp40) homolog, subfamily B, member 9 </td> <td> DNAJB9 </td> <td> 4189 </td> <td> NM_012328 </td> <td> 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0051787 // misfolded protein binding // inferred from direct assay </td> <td> -53.10 </td> <td> 50.58 </td> <td> -3.95 </td> <td> 0.00 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208858_s_at </td> <td> 208858_s_at </td> <td> BC004998 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004998.1 /DEF=Homo sapiens, Similar to membrane bound C2 domain containing protein, clone MGC:4422, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to membrane bound C2 domain containingprotein /DB_XREF=gi:13436457 /UG=Hs.8309 KIAA0747 protein /FL=gb:BC004998.1 </td> <td> BC004998 </td> <td> extended synaptotagmin-like protein 1 </td> <td> ESYT1 </td> <td> 23344 </td> <td> NM_001184796 /// NM_015292 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 68.93 </td> <td> 240.56 </td> <td> 3.95 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212753_at </td> <td> 212753_at </td> <td> AI692203 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI692203 /FEA=EST /DB_XREF=gi:4969543 /DB_XREF=est:wd37h12.x1 /CLONE=IMAGE:2330375 /UG=Hs.8834 ring finger protein 3 </td> <td> AI692203 </td> <td> polycomb group ring finger 3 </td> <td> PCGF3 </td> <td> 10336 </td> <td> NM_006315 /// XM_005272250 /// XM_005272252 /// XM_005272253 /// XM_005272254 /// XM_006713852 /// XM_006713853 /// XM_006713854 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0031519 // PcG protein complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 41.60 </td> <td> 138.53 </td> <td> 3.95 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221841_s_at </td> <td> 221841_s_at </td> <td> BF514079 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF514079 /FEA=EST /DB_XREF=gi:11599258 /DB_XREF=est:UI-H-BW1-amw-b-08-0-UI.s1 /CLONE=IMAGE:3071198 /UG=Hs.7934 Kruppel-like factor 4 (gut) </td> <td> BF514079 </td> <td> Kruppel-like factor 4 (gut) </td> <td> KLF4 </td> <td> 9314 </td> <td> NM_004235 /// XM_005252305 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007500 // mesodermal cell fate determination // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009913 // epidermal cell differentiation // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0014067 // negative regulation of phosphatidylinositol 3-kinase signaling // inferred from electronic annotation /// 0014740 // negative regulation of muscle hyperplasia // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031077 // post-embryonic camera-type eye development // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032270 // positive regulation of cellular protein metabolic process // inferred from mutant phenotype /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0034115 // negative regulation of heterotypic cell-cell adhesion // inferred from direct assay /// 0035166 // post-embryonic hemopoiesis // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042221 // response to chemical // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043551 // regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0045415 // negative regulation of interleukin-8 biosynthetic process // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from mutant phenotype /// 0045444 // fat cell differentiation // inferred from sequence or structural similarity /// 0045595 // regulation of cell differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046985 // positive regulation of hemoglobin biosynthetic process // inferred from mutant phenotype /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // traceable author statement /// 0051247 // positive regulation of protein metabolic process // inferred from genetic interaction /// 0051898 // negative regulation of protein kinase B signaling // inferred from electronic annotation /// 0060761 // negative regulation of response to cytokine stimulus // inferred from direct assay /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from direct assay /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071409 // cellular response to cycloheximide // inferred from electronic annotation /// 0071499 // cellular response to laminar fluid shear stress // inferred from mutant phenotype /// 0090051 // negative regulation of cell migration involved in sprouting angiogenesis // inferred from direct assay /// 1901653 // cellular response to peptide // inferred from electronic annotation /// 2000342 // negative regulation of chemokine (C-X-C motif) ligand 2 production // inferred from direct assay </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001010 // sequence-specific DNA binding transcription factor recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from mutant phenotype /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001085 // RNA polymerase II transcription factor binding // inferred from sequence or structural similarity /// 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0035014 // phosphatidylinositol 3-kinase regulator activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -54.80 </td> <td> 43.67 </td> <td> -3.95 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204190_at </td> <td> 204190_at </td> <td> NM_005800 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005800.1 /DEF=Homo sapiens highly charged protein (D13S106E), mRNA. /FEA=mRNA /GEN=D13S106E /PROD=highly charged protein /DB_XREF=gi:5031648 /UG=Hs.151236 highly charged protein /FL=gb:NM_005800.1 </td> <td> NM_005800 </td> <td> ubiquitin specific peptidase like 1 </td> <td> USPL1 </td> <td> 10208 </td> <td> NM_005800 /// XM_005266213 /// XM_005266214 /// XM_006719751 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0016926 // protein desumoylation // inferred from direct assay /// 0030576 // Cajal body organization // inferred from mutant phenotype </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay </td> <td> 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0032183 // SUMO binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0070140 // SUMO-specific isopeptidase activity // inferred from direct assay </td> <td> 50.50 </td> <td> 102.58 </td> <td> 3.95 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200977_s_at </td> <td> 200977_s_at </td> <td> AF090891 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF090891.1 /DEF=Homo sapiens clone HQ0105 PRO0105 mRNA, complete cds. /FEA=mRNA /PROD=PRO0105 /DB_XREF=gi:6690159 /UG=Hs.5437 Tax1 (human T-cell leukemia virus type I) binding protein 1 /FL=gb:U33821.2 gb:NM_006024.2 gb:AF090891.1 gb:AF268075.1 </td> <td> AF090891 </td> <td> Tax1 (human T-cell leukemia virus type I) binding protein 1 </td> <td> TAX1BP1 </td> <td> 8887 </td> <td> NM_001079864 /// NM_001206901 /// NM_001206902 /// NM_006024 /// XM_005249900 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from sequence or structural similarity </td> <td> -86.90 </td> <td> 315.50 </td> <td> -3.95 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212600_s_at </td> <td> 212600_s_at </td> <td> AV727381 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV727381 /FEA=EST /DB_XREF=gi:10836802 /DB_XREF=est:AV727381 /CLONE=HTCCEF02 /UG=Hs.173554 ubiquinol-cytochrome c reductase core protein II </td> <td> AV727381 </td> <td> ubiquinol-cytochrome c reductase core protein II </td> <td> UQCRC2 </td> <td> 7385 </td> <td> NM_003366 </td> <td> 0006119 // oxidative phosphorylation // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 135.98 </td> <td> 444.19 </td> <td> 3.94 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204290_s_at </td> <td> 204290_s_at </td> <td> NM_005589 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005589.1 /DEF=Homo sapiens methylmalonate-semialdehyde dehydrogenase (MMSDH), mRNA.  /FEA=mRNA /GEN=MMSDH /PROD=methylmalonate-semialdehyde dehydrogenase /DB_XREF=gi:11095440 /UG=Hs.293970 methylmalonate-semialdehyde dehydrogenase /FL=gb:NM_005589.1 gb:BC004909.1 gb:M93405.1 gb:AF148505.1 gb:AF159889.1 </td> <td> NM_005589 </td> <td> aldehyde dehydrogenase 6 family, member A1 </td> <td> ALDH6A1 </td> <td> 4329 </td> <td> NM_001278593 /// NM_001278594 /// NM_005589 </td> <td> 0006210 // thymine catabolic process // inferred from mutant phenotype /// 0006573 // valine metabolic process // inferred from sequence or structural similarity /// 0006574 // valine catabolic process // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0009083 // branched-chain amino acid catabolic process // traceable author statement /// 0019859 // thymine metabolic process // inferred from sequence or structural similarity /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000062 // fatty-acyl-CoA binding // inferred from sequence or structural similarity /// 0004491 // methylmalonate-semialdehyde dehydrogenase (acylating) activity // inferred from mutant phenotype /// 0004491 // methylmalonate-semialdehyde dehydrogenase (acylating) activity // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0018478 // malonate-semialdehyde dehydrogenase (acetylating) activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -36.55 </td> <td> 82.08 </td> <td> -3.94 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212774_at </td> <td> 212774_at </td> <td> AJ223321 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AJ223321 /DEF=Homo sapiens RP58 gene, complete CDS /FEA=mRNA /DB_XREF=gi:4128144 /UG=Hs.69997 zinc finger protein 238 </td> <td> AJ223321 </td> <td> zinc finger and BTB domain containing 18 </td> <td> ZBTB18 </td> <td> 10472 </td> <td> NM_001278196 /// NM_006352 /// NM_205768 /// XM_005273006 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from sequence or structural similarity /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0048666 // neuron development // inferred from electronic annotation /// 0048872 // homeostasis of number of cells // inferred from electronic annotation /// 0051302 // regulation of cell division // inferred from electronic annotation </td> <td> 0000228 // nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0045171 // intercellular bridge // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 73.80 </td> <td> 208.77 </td> <td> 3.94 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 210293_s_at </td> <td> 210293_s_at </td> <td> BC005032 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005032.1 /DEF=Homo sapiens, Sec23 (S. cerevisiae) homolog B, clone MGC:12666, mRNA, complete cds.  /FEA=mRNA /PROD=Sec23 (S. cerevisiae) homolog B /DB_XREF=gi:13477148 /UG=Hs.173497 Sec23 (S. cerevisiae) homolog B /FL=gb:BC005032.1 </td> <td> BC005032 </td> <td> Sec23 homolog B (S. cerevisiae) </td> <td> SEC23B </td> <td> 10483 </td> <td> NM_001172745 /// NM_001172746 /// NM_006363 /// NM_032985 /// NM_032986 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0030127 // COPII vesicle coat // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0008270 // zinc ion binding // inferred from electronic annotation </td> <td> 78.70 </td> <td> 116.05 </td> <td> 3.94 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200896_x_at </td> <td> 200896_x_at </td> <td> NM_004494 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004494.1 /DEF=Homo sapiens hepatoma-derived growth factor (high-mobility group protein 1-like) (HDGF), mRNA.  /FEA=mRNA /GEN=HDGF /PROD=hepatoma-derived growth factor (high-mobilitygroup protein 1-like) /DB_XREF=gi:4758515 /UG=Hs.89525 hepatoma-derived growth factor (high-mobility group protein 1-like) /FL=gb:NM_004494.1 gb:D16431.1 </td> <td> NM_004494 </td> <td> hepatoma-derived growth factor </td> <td> HDGF </td> <td> 3068 </td> <td> NM_001126050 /// NM_001126051 /// NM_004494 /// XM_006711280 /// XM_006711281 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009987 // cellular process // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0001222 // transcription corepressor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -245.58 </td> <td> 851.04 </td> <td> -3.94 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213518_at </td> <td> 213518_at </td> <td> AI689429 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI689429 /FEA=EST /DB_XREF=gi:4900723 /DB_XREF=est:tx83h10.x1 /CLONE=IMAGE:2276227 /UG=Hs.47144 DKFZP586N0819 protein </td> <td> AI689429 </td> <td> protein kinase C, iota </td> <td> PRKCI </td> <td> 5584 </td> <td> NM_002740 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0006612 // protein targeting to membrane // non-traceable author statement /// 0007010 // cytoskeleton organization // non-traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0034351 // negative regulation of glial cell apoptotic process // inferred from mutant phenotype /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035089 // establishment of apical/basal cell polarity // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042462 // eye photoreceptor cell development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0045197 // establishment or maintenance of epithelial cell apical/basal polarity // traceable author statement /// 0045216 // cell-cell junction organization // inferred from mutant phenotype /// 0045216 // cell-cell junction organization // traceable author statement /// 0046326 // positive regulation of glucose import // inferred from sequence or structural similarity /// 0046903 // secretion // non-traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048194 // Golgi vesicle budding // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0060252 // positive regulation of glial cell proliferation // inferred from mutant phenotype /// 0061024 // membrane organization // non-traceable author statement /// 0070555 // response to interleukin-1 // inferred from electronic annotation /// 0070830 // tight junction assembly // traceable author statement /// 0090004 // positive regulation of establishment of protein localization to plasma membrane // inferred from sequence or structural similarity /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from mutant phenotype </td> <td> 0000133 // polarisome // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045171 // intercellular bridge // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004697 // protein kinase C activity // inferred from sequence or structural similarity /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement /// 0005543 // phospholipid binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 33.27 </td> <td> 74.11 </td> <td> 3.94 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221787_at </td> <td> 221787_at </td> <td> BF431618 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF431618 /FEA=EST /DB_XREF=gi:11443732 /DB_XREF=est:7o16e03.x1 /CLONE=IMAGE:3574349 /UG=Hs.12342 Homo sapiens clone 24538 mRNA sequence </td> <td> BF431618 </td> <td> chromosome 6 open reading frame 120 </td> <td> C6orf120 </td> <td> 387263 </td> <td> NM_001029863 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> 39.33 </td> <td> 42.41 </td> <td> 3.94 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218482_at </td> <td> 218482_at </td> <td> NM_020189 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020189.1 /DEF=Homo sapiens DC6 protein (DC6), mRNA. /FEA=mRNA /GEN=DC6 /PROD=DC6 protein /DB_XREF=gi:9910185 /UG=Hs.283740 DC6 protein /FL=gb:AF201940.1 gb:AF173296.1 gb:NM_020189.1 </td> <td> NM_020189 </td> <td> enhancer of yellow 2 homolog (Drosophila) </td> <td> ENY2 </td> <td> 56943 </td> <td> NM_001193557 /// NM_020189 /// NR_036471 /// NR_036472 </td> <td> 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016578 // histone deubiquitination // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0000124 // SAGA complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0070390 // transcription export complex 2 // inferred from electronic annotation /// 0071819 // DUBm complex // inferred from electronic annotation </td> <td> 0003713 // transcription coactivator activity // inferred from direct assay /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay </td> <td> -117.60 </td> <td> 679.17 </td> <td> -3.94 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 215489_x_at </td> <td> 215489_x_at </td> <td> AI871287 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI871287 /FEA=EST /DB_XREF=gi:5545255 /DB_XREF=est:wl80h02.x1 /CLONE=IMAGE:2431251 /UG=Hs.166146 Homer, neuronal immediate early gene, 3 </td> <td> AI871287 </td> <td> homer homolog 3 (Drosophila) </td> <td> HOMER3 </td> <td> 9454 </td> <td> NM_001145721 /// NM_001145722 /// NM_001145724 /// NM_004838 /// NR_027297 /// XM_006722943 /// XM_006722944 </td> <td> 0006605 // protein targeting // traceable author statement /// 0007216 // G-protein coupled glutamate receptor signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045178 // basal part of cell // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> -71.57 </td> <td> 226.36 </td> <td> -3.93 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212511_at </td> <td> 212511_at </td> <td> AI766247 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI766247 /FEA=EST /DB_XREF=gi:5232756 /DB_XREF=est:wh68f03.x1 /CLONE=IMAGE:2385917 /UG=Hs.7885 phosphatidylinositol binding clathrin assembly protein </td> <td> AI766247 </td> <td> phosphatidylinositol binding clathrin assembly protein </td> <td> PICALM </td> <td> 8301 </td> <td> NM_001008660 /// NM_001206946 /// NM_001206947 /// NM_007166 /// XM_005274322 /// XM_005274323 /// XM_005274324 /// XM_005274325 /// XM_005274326 /// XM_005274327 /// XM_005274328 /// XM_005274329 /// XM_005274330 /// XM_005274331 /// XM_005274332 /// XM_005274333 /// XM_005274334 /// XM_005274335 /// XM_005274336 /// XM_005274337 /// XM_005274338 /// XM_005274340 /// XM_006718699 /// XM_006718700 /// XM_006718701 /// XM_006718702 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from mutant phenotype /// 0016188 // synaptic vesicle maturation // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from mutant phenotype /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0032880 // regulation of protein localization // inferred from direct assay /// 0035459 // cargo loading into vesicle // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0048261 // negative regulation of receptor-mediated endocytosis // inferred from direct assay /// 0048268 // clathrin coat assembly // inferred from mutant phenotype /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from mutant phenotype /// 0072583 // clathrin-mediated endocytosis // inferred from mutant phenotype /// 0097459 // iron ion import into cell // inferred from mutant phenotype /// 1901216 // positive regulation of neuron death // inferred from mutant phenotype /// 1902004 // positive regulation of beta-amyloid formation // inferred from mutant phenotype /// 1902959 // regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process // inferred from mutant phenotype /// 1902961 // positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process // inferred from sequence or structural similarity /// 1902963 // negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // inferred from direct assay /// 0030132 // clathrin coat of coated pit // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from sequence or structural similarity /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0097418 // neurofibrillary tangle // inferred from mutant phenotype </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from sequence or structural similarity /// 0030276 // clathrin binding // inferred from direct assay /// 0030276 // clathrin binding // inferred from physical interaction /// 0030276 // clathrin binding // inferred from sequence or structural similarity /// 0032050 // clathrin heavy chain binding // inferred from direct assay /// 0035615 // clathrin adaptor activity // inferred from mutant phenotype </td> <td> 58.30 </td> <td> 103.92 </td> <td> 3.93 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202174_s_at </td> <td> 202174_s_at </td> <td> NM_006197 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006197.1 /DEF=Homo sapiens pericentriolar material 1 (PCM1), mRNA. /FEA=mRNA /GEN=PCM1 /PROD=pericentriolar material 1 /DB_XREF=gi:5453855 /UG=Hs.75737 pericentriolar material 1 /FL=gb:L27841.1 gb:NM_006197.1 </td> <td> NM_006197 </td> <td> pericentriolar material 1 </td> <td> PCM1 </td> <td> 5108 </td> <td> NM_006197 /// XM_005273509 /// XM_005273512 /// XM_005273519 /// XM_005273520 /// XM_005273521 /// XM_006716336 /// XM_006716337 /// XM_006716338 /// XM_006716339 /// XM_006716340 /// XM_006716341 /// XM_006716342 /// XM_006716343 /// XM_006716344 /// XM_006716345 /// XM_006716346 /// XM_006716347 /// XM_006716348 /// XM_006716349 /// XM_006716350 /// XR_428310 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001838 // embryonic epithelial tube formation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007497 // posterior midgut development // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0014042 // positive regulation of neuron maturation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0022027 // interkinetic nuclear migration // inferred from sequence or structural similarity /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0031122 // cytoplasmic microtubule organization // inferred from mutant phenotype /// 0033619 // membrane protein proteolysis // inferred from direct assay /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0034453 // microtubule anchoring // inferred from sequence or structural similarity /// 0034454 // microtubule anchoring at centrosome // inferred from electronic annotation /// 0035735 // intraciliary transport involved in cilium morphogenesis // inferred from mutant phenotype /// 0035799 // ureter maturation // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0042551 // neuron maturation // inferred from electronic annotation /// 0045793 // positive regulation of cell size // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0048265 // response to pain // inferred from electronic annotation /// 0048265 // response to pain // inferred from sequence or structural similarity /// 0048484 // enteric nervous system development // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from sequence or structural similarity /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0060384 // innervation // inferred from electronic annotation /// 0061146 // Peyer's patch morphogenesis // inferred from electronic annotation /// 0061146 // Peyer's patch morphogenesis // inferred from sequence or structural similarity /// 0071300 // cellular response to retinoic acid // inferred from mutant phenotype /// 0071539 // protein localization to centrosome // inferred from sequence or structural similarity /// 0072300 // positive regulation of metanephric glomerulus development // inferred from electronic annotation /// 0072300 // positive regulation of metanephric glomerulus development // inferred from sequence or structural similarity /// 0090316 // positive regulation of intracellular protein transport // inferred from mutant phenotype /// 0097021 // lymphocyte migration into lymphoid organs // inferred from sequence or structural similarity /// 0097150 // neuronal stem cell maintenance // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0000242 // pericentriolar material // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0034451 // centriolar satellite // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity </td> <td> -90.55 </td> <td> 223.70 </td> <td> -3.93 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212665_at </td> <td> 212665_at </td> <td> AL556438 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL556438 /FEA=EST /DB_XREF=gi:12899113 /DB_XREF=est:AL556438 /CLONE=CS0DK004YI18 (3 prime) /UG=Hs.12813 DKFZP434J214 protein </td> <td> AL556438 </td> <td> TCDD-inducible poly(ADP-ribose) polymerase </td> <td> TIPARP </td> <td> 25976 </td> <td> NM_001184717 /// NM_001184718 /// NM_015508 </td> <td> 0001570 // vasculogenesis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from mutant phenotype /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0044236 // multicellular organismal metabolic process // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from mutant phenotype /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0035326 // enhancer binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 80.37 </td> <td> 206.54 </td> <td> 3.93 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202551_s_at </td> <td> 202551_s_at </td> <td> BG546884 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG546884 /FEA=EST /DB_XREF=gi:13545549 /DB_XREF=est:602574066F1 /CLONE=IMAGE:4702049 /UG=Hs.19280 cysteine-rich motor neuron 1 /FL=gb:NM_016441.1 gb:AF167706.1 </td> <td> BG546884 </td> <td> cysteine rich transmembrane BMP regulator 1 (chordin-like) /// uncharacterized LOC101929500 </td> <td> CRIM1 /// LOC101929500 </td> <td> 51232 /// 101929500 </td> <td> NM_016441 /// XM_005264357 /// XM_005264358 /// XR_244983 /// XR_249109 /// XR_251054 /// XR_426983 </td> <td> 0001558 // regulation of cell growth // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from direct assay </td> <td> -304.45 </td> <td> 1180.67 </td> <td> -3.93 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213330_s_at </td> <td> 213330_s_at </td> <td> BE886580 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE886580 /FEA=EST /DB_XREF=gi:10341010 /DB_XREF=est:601509325F1 /CLONE=IMAGE:3910566 /UG=Hs.75612 stress-induced-phosphoprotein 1 (Hsp70Hsp90-organizing protein) </td> <td> BE886580 </td> <td> stress-induced phosphoprotein 1 </td> <td> STIP1 </td> <td> 10963 </td> <td> NM_001282652 /// NM_001282653 /// NM_006819 </td> <td> 0006950 // response to stress // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from electronic annotation </td> <td> 47.82 </td> <td> 161.49 </td> <td> 3.92 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212449_s_at </td> <td> 212449_s_at </td> <td> BG288007 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG288007 /FEA=EST /DB_XREF=gi:13042412 /DB_XREF=est:602387785F1 /CLONE=IMAGE:4516701 /UG=Hs.12540 lysophospholipase I </td> <td> BG288007 </td> <td> lysophospholipase I </td> <td> LYPLA1 </td> <td> 10434 </td> <td> NM_001279356 /// NM_001279357 /// NM_001279358 /// NM_001279359 /// NM_001279360 /// NM_006330 /// XM_005251127 /// XM_006716417 /// XR_428339 </td> <td> 0002084 // protein depalmitoylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0042997 // negative regulation of Golgi to plasma membrane protein transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004622 // lysophospholipase activity // traceable author statement /// 0008474 // palmitoyl-(protein) hydrolase activity // inferred from mutant phenotype /// 0008474 // palmitoyl-(protein) hydrolase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 137.85 </td> <td> 395.27 </td> <td> 3.92 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208794_s_at </td> <td> 208794_s_at </td> <td> D26156 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D26156.1 /DEF=Human mRNA for transcriptional activator hSNF2b, complete cds. /FEA=mRNA /PROD=hSNF2b /DB_XREF=gi:505087 /UG=Hs.78202 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 /FL=gb:NM_003072.1 gb:D26156.1 gb:U29175.1 </td> <td> D26156 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 </td> <td> SMARCA4 </td> <td> 6597 </td> <td> NM_001128844 /// NM_001128845 /// NM_001128846 /// NM_001128847 /// NM_001128848 /// NM_001128849 /// NM_003072 /// XM_005260028 /// XM_005260030 /// XM_005260031 /// XM_005260032 /// XM_005260033 /// XM_005260034 /// XM_005260035 /// XM_006722845 /// XM_006722846 /// XM_006722847 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001832 // blastocyst growth // inferred from electronic annotation /// 0001835 // blastocyst hatching // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003407 // neural retina development // inferred from expression pattern /// 0006200 // ATP catabolic process // inferred from genetic interaction /// 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred by curator /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0007070 // negative regulation of transcription from RNA polymerase II promoter during mitosis // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007403 // glial cell fate determination // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010424 // DNA methylation on cytosine within a CG sequence // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030900 // forebrain development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035887 // aortic smooth muscle cell differentiation // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0043923 // positive regulation by host of viral transcription // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048562 // embryonic organ morphogenesis // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0060318 // definitive erythrocyte differentiation // inferred from electronic annotation /// 0060347 // heart trabecula formation // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005719 // nuclear euchromatin // inferred from electronic annotation /// 0005726 // perichromatin fibrils // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from sequence or structural similarity /// 0071778 // WINAC complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // inferred from genetic interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042393 // histone binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction /// 0070577 // lysine-acetylated histone binding // inferred from direct assay </td> <td> 93.20 </td> <td> 217.68 </td> <td> 3.92 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221471_at </td> <td> 221471_at </td> <td> AW173623 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW173623 /FEA=EST /DB_XREF=gi:6439571 /DB_XREF=est:xj10a08.x1 /CLONE=IMAGE:2656790 /UG=Hs.272168 tumor differentially expressed 1 /FL=gb:U49188.1 gb:AF112227.1 gb:AF153979.1 gb:NM_006811.1 </td> <td> AW173623 </td> <td> serine incorporator 3 </td> <td> SERINC3 </td> <td> 10955 </td> <td> NM_006811 /// NM_198941 </td> <td> 1902237 // positive regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -86.92 </td> <td> 292.86 </td> <td> -3.92 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221746_at </td> <td> 221746_at </td> <td> BE543027 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE543027 /FEA=EST /DB_XREF=gi:9771672 /DB_XREF=est:601068951F1 /CLONE=IMAGE:3455220 /UG=Hs.76480 ubiquitin-like 4 /FL=gb:NM_014235.1 </td> <td> BE543027 </td> <td> ubiquitin-like 4A </td> <td> UBL4A </td> <td> 8266 </td> <td> NM_014235 </td> <td> 0006464 // cellular protein modification process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0071818 // BAT3 complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019787 // small conjugating protein ligase activity // traceable author statement </td> <td> 40.65 </td> <td> 76.03 </td> <td> 3.91 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201795_at </td> <td> 201795_at </td> <td> NM_002296 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002296.1 /DEF=Homo sapiens lamin B receptor (LBR), mRNA. /FEA=mRNA /GEN=LBR /PROD=lamin B receptor /DB_XREF=gi:4504960 /UG=Hs.152931 lamin B receptor /FL=gb:L25931.1 gb:NM_002296.1 </td> <td> NM_002296 </td> <td> lamin B receptor </td> <td> LBR </td> <td> 3930 </td> <td> NM_002296 /// NM_194442 /// XM_005273125 </td> <td> 0006695 // cholesterol biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005639 // integral component of nuclear inner membrane // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // traceable author statement /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070087 // chromo shadow domain binding // inferred from physical interaction </td> <td> 195.43 </td> <td> 397.71 </td> <td> 3.91 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208891_at </td> <td> 208891_at </td> <td> BC003143 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003143.1 /DEF=Homo sapiens, dual specificity phosphatase 6, clone MGC:3789, mRNA, complete cds.  /FEA=mRNA /PROD=dual specificity phosphatase 6 /DB_XREF=gi:13111942 /UG=Hs.180383 dual specificity phosphatase 6 /FL=gb:BC003562.1 gb:BC003143.1 gb:BC005047.1 gb:AB013382.1 gb:NM_001946.1 </td> <td> BC003143 </td> <td> dual specificity phosphatase 6 </td> <td> DUSP6 </td> <td> 1848 </td> <td> NM_001946 /// NM_022652 </td> <td> 0000188 // inactivation of MAPK activity // inferred from direct assay /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // not recorded /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // not recorded /// 0042493 // response to drug // inferred from electronic annotation /// 0042663 // regulation of endodermal cell fate specification // not recorded /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051409 // response to nitrosative stress // inferred from expression pattern /// 0060420 // regulation of heart growth // not recorded /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070848 // response to growth factor // inferred from electronic annotation </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from direct assay </td> <td> -519.80 </td> <td> 1028.58 </td> <td> -3.91 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202151_s_at </td> <td> 202151_s_at </td> <td> NM_016172 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016172.1 /DEF=Homo sapiens putative glialblastoma cell differentiation-related (GDBR1), mRNA.  /FEA=mRNA /GEN=GDBR1 /PROD=putative glialblastoma celldifferentiation-related protein /DB_XREF=gi:7705380 /UG=Hs.9194 putative glialblastoma cell differentiation-related /FL=gb:BC004967.1 gb:AF176796.1 gb:NM_016172.1 </td> <td> NM_016172 </td> <td> UBA domain containing 1 </td> <td> UBAC1 </td> <td> 10422 </td> <td> NM_016172 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 57.80 </td> <td> 73.75 </td> <td> 3.91 </td> <td> 0.01 </td> <td> 0.01 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221742_at </td> <td> 221742_at </td> <td> BF037823 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF037823 /FEA=EST /DB_XREF=gi:10746209 /DB_XREF=est:601461994F1 /CLONE=IMAGE:3865487 /UG=Hs.9683 DnaJ (Hsp40) homolog, subfamily C, member 3 </td> <td> BF037823 </td> <td> CUGBP, Elav-like family member 1 </td> <td> CELF1 </td> <td> 10658 </td> <td> NM_001025596 /// NM_001172639 /// NM_001172640 /// NM_006560 /// NM_198700 /// XM_005252754 /// XM_005252755 /// XM_005252756 /// XM_006718122 /// XM_006718123 /// XM_006718124 /// XM_006718125 /// XM_006718126 /// XM_006718127 /// XM_006718128 /// XM_006718129 /// XM_006718130 /// XM_006718131 </td> <td> 0006376 // mRNA splice site selection // inferred from sequence or structural similarity /// 0006397 // mRNA processing // traceable author statement /// 0007281 // germ cell development // non-traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009790 // embryo development // non-traceable author statement /// 0016246 // RNA interference // non-traceable author statement /// 0017148 // negative regulation of translation // non-traceable author statement /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000900 // translation repressor activity, nucleic acid binding // non-traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0031369 // translation initiation factor binding // inferred from electronic annotation /// 0042835 // BRE binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 42.60 </td> <td> 101.97 </td> <td> 3.91 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200067_x_at </td> <td> 200067_x_at </td> <td> AL078596 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL078596 /DEF=Human DNA sequence from clone RP3-429G5 on chromosome 6q21-22.1. Contains the NR2E1 gene for nuclear receptor 2E1 (tailless, TLL, TLX, XTLL), the 3 end of the SNX3 gene for sorting nexin 3, ESTs, STSs, GSSs and four predicted CpG islands /FEA=mRNA_2 /DB_XREF=gi:6010168 /UG=Hs.12102 sorting nexin 3 /FL=gb:AF062483.1 gb:AF034546.1 gb:NM_003795.1 </td> <td> AL078596 </td> <td> sorting nexin 3 </td> <td> SNX3 </td> <td> 8724 </td> <td> NM_003795 /// NM_152827 /// NM_152828 /// XM_005267192 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // not recorded /// 0006897 // endocytosis // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0042541 // hemoglobin biosynthetic process // not recorded </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation </td> <td> 125.72 </td> <td> 529.39 </td> <td> 3.91 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202973_x_at </td> <td> 202973_x_at </td> <td> NM_014883 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014883.1 /DEF=Homo sapiens KIAA0914 gene product (KIAA0914), mRNA. /FEA=mRNA /GEN=KIAA0914 /PROD=KIAA0914 gene product /DB_XREF=gi:7662375 /UG=Hs.177664 KIAA0914 gene product /FL=gb:AB020721.1 gb:NM_014883.1 </td> <td> NM_014883 </td> <td> family with sequence similarity 13, member A </td> <td> FAM13A </td> <td> 10144 </td> <td> NM_001015045 /// NM_001265578 /// NM_001265579 /// NM_001265580 /// NM_014883 /// XM_005262681 /// XM_005262682 /// XM_005262683 /// XM_005262684 /// XM_005262685 /// XM_006714057 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation </td> <td> -38.63 </td> <td> 62.84 </td> <td> -3.91 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 57163_at </td> <td> 57163_at </td> <td> H93026 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. H93026:yv06a08.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-241910 /clone_end=3' /gb=H93026 /gi=1099354 /ug=Hs.25597 /len=600 </td> <td> H93026 </td> <td> ELOVL fatty acid elongase 1 /// microRNA 6734 </td> <td> ELOVL1 /// MIR6734 </td> <td> 64834 /// 102466723 </td> <td> NM_001256399 /// NM_001256401 /// NM_001256402 /// NM_022821 /// NR_046117 /// NR_106792 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from direct assay /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from mutant phenotype /// 0034625 // fatty acid elongation, monounsaturated fatty acid // inferred from direct assay /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042761 // very long-chain fatty acid biosynthetic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0009922 // fatty acid elongase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 96.97 </td> <td> 230.71 </td> <td> 3.91 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208869_s_at </td> <td> 208869_s_at </td> <td> AF087847 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF087847.1 /DEF=Homo sapiens GABA-A receptor-associated protein like 1 (GABARAPL1) mRNA, complete cds.  /FEA=mRNA /GEN=GABARAPL1 /PROD=GABA-A receptor-associated protein like 1 /DB_XREF=gi:13375570 /UG=Hs.282654 Homo sapiens mRNA; cDNA DKFZp564N1272 (from clone DKFZp564N1272); complete cds /FL=gb:AL136676.1 gb:AF087847.1 </td> <td> AF087847 </td> <td> GABA(A) receptor-associated protein like 1 </td> <td> GABARAPL1 </td> <td> 23710 </td> <td> NM_031412 /// XM_005253344 </td> <td> 0000045 // autophagic vacuole assembly // not recorded /// 0000422 // mitochondrion degradation // not recorded /// 0006914 // autophagy // inferred from electronic annotation /// 0012501 // programmed cell death // not recorded /// 0032258 // CVT pathway // not recorded /// 0034727 // piecemeal microautophagy of nucleus // not recorded /// 0044805 // late nucleophagy // not recorded /// 0071211 // protein targeting to vacuole involved in autophagy // not recorded </td> <td> 0000407 // pre-autophagosomal structure // not recorded /// 0000421 // autophagic vacuole membrane // not recorded /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032590 // dendrite membrane // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // not recorded /// 0008429 // phosphatidylethanolamine binding // not recorded /// 0048487 // beta-tubulin binding // inferred from sequence or structural similarity /// 0050811 // GABA receptor binding // not recorded /// 0050811 // GABA receptor binding // inferred from sequence or structural similarity </td> <td> -73.07 </td> <td> 93.19 </td> <td> -3.91 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 205681_at </td> <td> 205681_at </td> <td> NM_004049 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004049.1 /DEF=Homo sapiens BCL2-related protein A1 (BCL2A1), mRNA. /FEA=mRNA /GEN=BCL2A1 /PROD=BCL2-related protein A1 /DB_XREF=gi:4757839 /UG=Hs.227817 BCL2-related protein A1 /FL=gb:U27467.1 gb:U29680.1 gb:NM_004049.1 </td> <td> NM_004049 </td> <td> BCL2-related protein A1 </td> <td> BCL2A1 </td> <td> 597 </td> <td> NM_001114735 /// NM_004049 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // not recorded /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // not recorded /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // not recorded /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // not recorded </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // not recorded </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // not recorded /// 0046982 // protein heterodimerization activity // not recorded /// 0051400 // BH domain binding // inferred from electronic annotation </td> <td> -44.97 </td> <td> 27.24 </td> <td> -3.91 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213342_at </td> <td> 213342_at </td> <td> AI745185 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI745185 /FEA=EST /DB_XREF=gi:5113473 /DB_XREF=est:wg10a05.x1 /CLONE=IMAGE:2364656 /UG=Hs.8939 yes-associated protein 65 kDa /FL=gb:NM_006106.1 </td> <td> AI745185 </td> <td> Yes-associated protein 1 </td> <td> YAP1 </td> <td> 10413 </td> <td> NM_001130145 /// NM_001195044 /// NM_001195045 /// NM_001282097 /// NM_001282098 /// NM_001282099 /// NM_001282100 /// NM_001282101 /// NM_006106 /// XM_005271378 /// XM_005271380 /// XM_005271381 /// XM_005271383 </td> <td> 0001570 // vasculogenesis // inferred from electronic annotation /// 0003143 // embryonic heart tube morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0008283 // cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010837 // regulation of keratinocyte proliferation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// 0030903 // notochord development // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035329 // hippo signaling // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048339 // paraxial mesoderm development // inferred from electronic annotation /// 0048368 // lateral mesoderm development // inferred from electronic annotation /// 0060242 // contact inhibition // inferred from direct assay /// 0071480 // cellular response to gamma radiation // inferred from direct assay /// 0072091 // regulation of stem cell proliferation // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from electronic annotation </td> <td> -49.93 </td> <td> 74.71 </td> <td> -3.91 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203650_at </td> <td> 203650_at </td> <td> NM_006404 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006404.1 /DEF=Homo sapiens protein C receptor, endothelial (EPCR) (PROCR), mRNA. /FEA=mRNA /GEN=PROCR /PROD=protein C receptor, endothelial (EPCR) /DB_XREF=gi:5453645 /UG=Hs.82353 protein C receptor, endothelial (EPCR) /FL=gb:NM_006404.1 gb:L35545.1 </td> <td> NM_006404 </td> <td> protein C receptor, endothelial </td> <td> PROCR </td> <td> 10544 </td> <td> NM_006404 /// XM_005260251 /// XM_006723682 </td> <td> 0006955 // immune response // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0050819 // negative regulation of coagulation // inferred from mutant phenotype </td> <td> 0005813 // centrosome // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 126.40 </td> <td> 410.65 </td> <td> 3.90 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 210150_s_at </td> <td> 210150_s_at </td> <td> BC003355 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003355.1 /DEF=Homo sapiens, clone MGC:5311, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:5311) /DB_XREF=gi:13097167 /UG=Hs.312953 Homo sapiens, clone MGC:5311, mRNA, complete cds /FL=gb:BC003355.1 </td> <td> BC003355 </td> <td> laminin, alpha 5 </td> <td> LAMA5 </td> <td> 3911 </td> <td> NM_005560 /// XM_006723796 /// XM_006723797 /// XM_006723798 </td> <td> 0001525 // angiogenesis // non-traceable author statement /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001738 // morphogenesis of a polarized epithelium // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0007010 // cytoskeleton organization // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from mutant phenotype /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008037 // cell recognition // non-traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0009790 // embryo development // non-traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0045446 // endothelial cell differentiation // non-traceable author statement /// 0045995 // regulation of embryonic development // inferred from electronic annotation /// 0048041 // focal adhesion assembly // non-traceable author statement /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0090002 // establishment of protein localization to plasma membrane // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005605 // basal lamina // non-traceable author statement /// 0005606 // laminin-1 complex // inferred from electronic annotation /// 0005610 // laminin-5 complex // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0043259 // laminin-10 complex // inferred from direct assay /// 0043259 // laminin-10 complex // traceable author statement /// 0043260 // laminin-11 complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from direct assay /// 0005198 // structural molecule activity // inferred by curator /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 37.35 </td> <td> 105.85 </td> <td> 3.90 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213180_s_at </td> <td> 213180_s_at </td> <td> BE895285 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE895285 /FEA=EST /DB_XREF=gi:10358525 /DB_XREF=est:601433529F1 /CLONE=IMAGE:3918799 /UG=Hs.100651 golgi SNAP receptor complex member 2 </td> <td> BE895285 </td> <td> golgi SNAP receptor complex member 2 </td> <td> GOSR2 </td> <td> 9570 </td> <td> NM_001012511 /// NM_004287 /// NM_054022 /// XM_005257843 /// XM_005257844 /// XM_005257845 /// XM_006722188 /// XM_006722189 /// XM_006722190 /// XM_006722191 /// XM_006722192 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0061025 // membrane fusion // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005215 // transporter activity // traceable author statement </td> <td> 36.63 </td> <td> 90.66 </td> <td> 3.90 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209182_s_at </td> <td> 209182_s_at </td> <td> AI302100 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI302100 /FEA=EST /DB_XREF=gi:3961446 /DB_XREF=est:qn57g11.x1 /CLONE=IMAGE:1902404 /UG=Hs.93675 decidual protein induced by progesterone /FL=gb:AB022718.1 gb:NM_007021.1 gb:AL136653.1 </td> <td> AI302100 </td> <td> chromosome 10 open reading frame 10 </td> <td> C10orf10 </td> <td> 11067 </td> <td> NM_007021 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from direct assay </td> <td>  </td> <td> -183.30 </td> <td> 210.15 </td> <td> -3.90 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208909_at </td> <td> 208909_at </td> <td> BC000649 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000649.1 /DEF=Homo sapiens, ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1, clone MGC:1362, mRNA, complete cds.  /FEA=mRNA /PROD=ubiquinol-cytochrome c reductase, Rieskeiron-sulfur polypeptide 1 /DB_XREF=gi:12653726 /UG=Hs.3712 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 /FL=gb:BC000649.1 gb:NM_006003.1 </td> <td> BC000649 </td> <td> ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 </td> <td> UQCRFS1 </td> <td> 7386 </td> <td> NM_006003 </td> <td> 0009725 // response to hormone // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046677 // response to antibiotic // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // non-traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008121 // ubiquinol-cytochrome-c reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016679 // oxidoreductase activity, acting on diphenols and related substances as donors // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation </td> <td> 130.00 </td> <td> 734.55 </td> <td> 3.90 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212731_at </td> <td> 212731_at </td> <td> U79297 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U79297.1 /DEF=Human clone 23589 mRNA sequence. /FEA=mRNA /DB_XREF=gi:1710280 /UG=Hs.11506 Human clone 23589 mRNA sequence </td> <td> U79297 </td> <td> ankyrin repeat domain 46 </td> <td> ANKRD46 </td> <td> 157567 </td> <td> NM_001270377 /// NM_001270378 /// NM_001270379 /// NM_198401 /// XM_006716509 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 46.10 </td> <td> 55.38 </td> <td> 3.90 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204206_at </td> <td> 204206_at </td> <td> NM_020310 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020310.1 /DEF=Homo sapiens MAX binding protein (MNT), mRNA. /FEA=mRNA /GEN=MNT /PROD=MAX binding protein /DB_XREF=gi:9945317 /UG=Hs.25497 MAX binding protein /FL=gb:NM_020310.1 </td> <td> NM_020310 </td> <td> MAX network transcriptional repressor </td> <td> MNT </td> <td> 4335 </td> <td> NM_020310 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007569 // cell aging // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0001227 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -56.53 </td> <td> 111.76 </td> <td> -3.90 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201758_at </td> <td> 201758_at </td> <td> NM_006292 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006292.1 /DEF=Homo sapiens tumor susceptibility gene 101 (TSG101), mRNA. /FEA=mRNA /GEN=TSG101 /PROD=tumor susceptibility gene 101 /DB_XREF=gi:5454139 /UG=Hs.118910 tumor susceptibility gene 101 /FL=gb:BC002487.1 gb:U82130.1 gb:NM_006292.1 </td> <td> NM_006292 </td> <td> tumor susceptibility 101 </td> <td> TSG101 </td> <td> 7251 </td> <td> NM_006292 /// XM_005253107 /// XM_005253108 </td> <td> 0001558 // regulation of cell growth // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019082 // viral protein processing // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043162 // ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway // inferred by curator /// 0043162 // ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway // inferred from direct assay /// 0043162 // ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0046755 // viral budding // inferred from mutant phenotype /// 0046755 // viral budding // inferred from sequence or structural similarity /// 0051301 // cell division // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0000813 // ESCRT I complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from mutant phenotype /// 0005771 // multivesicular body // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // traceable author statement /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay /// 0043130 // ubiquitin binding // traceable author statement /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> -74.65 </td> <td> 296.02 </td> <td> -3.89 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218403_at </td> <td> 218403_at </td> <td> NM_016399 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016399.1 /DEF=Homo sapiens hypothetical protein (HSPC132), mRNA. /FEA=mRNA /GEN=HSPC132 /PROD=hypothetical protein /DB_XREF=gi:7705466 /UG=Hs.69499 hypothetical protein /FL=gb:BC002638.1 gb:AF161481.1 gb:NM_016399.1 </td> <td> NM_016399 </td> <td> TP53 regulated inhibitor of apoptosis 1 </td> <td> TRIAP1 </td> <td> 51499 </td> <td> NM_016399 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0015914 // phospholipid transport // inferred from direct assay /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0034644 // cellular response to UV // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0097035 // regulation of membrane lipid distribution // inferred from mutant phenotype /// 1902166 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from mutant phenotype /// 2001140 // positive regulation of phospholipid transport // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0002039 // p53 binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 1990050 // phosphatidic acid transporter activity // inferred from direct assay </td> <td> 109.32 </td> <td> 389.26 </td> <td> 3.89 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 219276_x_at </td> <td> 219276_x_at </td> <td> NM_024828 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024828.1 /DEF=Homo sapiens hypothetical protein FLJ13657 (FLJ13657), mRNA. /FEA=mRNA /GEN=FLJ13657 /PROD=hypothetical protein FLJ13657 /DB_XREF=gi:13376229 /UG=Hs.178357 hypothetical protein FLJ13657 /FL=gb:NM_024828.1 </td> <td> NM_024828 </td> <td> caspase activity and apoptosis inhibitor 1 </td> <td> CAAP1 </td> <td> 79886 </td> <td> NM_001167575 /// NM_024828 /// XM_005251581 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation </td> <td>  </td> <td>  </td> <td> -44.27 </td> <td> 142.49 </td> <td> -3.89 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203992_s_at </td> <td> 203992_s_at </td> <td> AF000992 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF000992.1 /DEF=Homo sapiens ubiquitous TPR motif, X isoform (UTX) mRNA, alternative transcript 1, complete cds.  /FEA=mRNA /GEN=UTX /PROD=ubiquitous TPR motif, X isoform /DB_XREF=gi:2580569 /UG=Hs.13980 ubiquitously transcribed tetratricopeptide repeat gene, X chromosome /FL=gb:NM_021140.1 gb:AF000992.1 gb:AF000993.1 </td> <td> AF000992 </td> <td> lysine (K)-specific demethylase 6A </td> <td> KDM6A </td> <td> 7403 </td> <td> NM_001291415 /// NM_001291416 /// NM_001291417 /// NM_001291418 /// NM_001291421 /// NM_021140 /// NR_111960 /// XM_005272655 /// XM_005272656 /// XM_005272657 /// XM_005272658 /// XM_005272659 /// XM_005272660 /// XM_005272661 /// XR_430507 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032525 // somite rostral/caudal axis specification // inferred from electronic annotation /// 0048333 // mesodermal cell differentiation // inferred from electronic annotation /// 0048570 // notochord morphogenesis // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway // inferred from electronic annotation /// 0071557 // histone H3-K27 demethylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation /// 0071558 // histone demethylase activity (H3-K27 specific) // inferred from electronic annotation </td> <td> -36.03 </td> <td> 65.24 </td> <td> -3.89 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218774_at </td> <td> 218774_at </td> <td> NM_014026 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014026.1 /DEF=Homo sapiens HSPC015 protein (HSPC015), mRNA. /FEA=mRNA /GEN=HSPC015 /PROD=HSPC015 protein /DB_XREF=gi:7661733 /UG=Hs.279900 HSPC015 protein /FL=gb:AF077201.1 gb:NM_014026.1 </td> <td> NM_014026 </td> <td> decapping enzyme, scavenger </td> <td> DCPS </td> <td> 28960 </td> <td> NM_014026 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000290 // deadenylation-dependent decapping of nuclear-transcribed mRNA // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0036245 // cellular response to menadione // inferred from direct assay /// 0043069 // negative regulation of programmed cell death // inferred from direct assay /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0045292 // mRNA cis splicing, via spliceosome // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000340 // RNA 7-methylguanosine cap binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0050072 // m7G(5')pppN diphosphatase activity // inferred from direct assay </td> <td> 44.60 </td> <td> 69.47 </td> <td> 3.89 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201316_at </td> <td> 201316_at </td> <td> AL523904 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL523904 /FEA=EST /DB_XREF=gi:12787397 /DB_XREF=est:AL523904 /CLONE=CS0DC003YB07 (3 prime) /UG=Hs.181309 proteasome (prosome, macropain) subunit, alpha type, 2 /FL=gb:NM_002787.1 </td> <td> AL523904 </td> <td> proteasome (prosome, macropain) subunit, alpha type, 2 </td> <td> PSMA2 </td> <td> 5683 </td> <td> NM_002787 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 31.60 </td> <td> 72.97 </td> <td> 3.89 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212688_at </td> <td> 212688_at </td> <td> BC003393 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BC003393.1 /DEF=Homo sapiens, clone IMAGE:3447173, mRNA, partial cds. /FEA=mRNA /PROD=Unknown (protein for IMAGE:3447173) /DB_XREF=gi:13097275 /UG=Hs.239818 phosphoinositide-3-kinase, catalytic, beta polypeptide /FL=gb:NM_006219.1 </td> <td> BC003393 </td> <td> phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta </td> <td> PIK3CB </td> <td> 5291 </td> <td> NM_001256045 /// NM_006219 /// XM_005247530 /// XM_005247531 /// XM_005247532 /// XM_006713659 </td> <td> 0000187 // activation of MAPK activity // traceable author statement /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006935 // chemotaxis // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010508 // positive regulation of autophagy // traceable author statement /// 0014065 // phosphatidylinositol 3-kinase signaling // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0040016 // embryonic cleavage // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0070527 // platelet aggregation // traceable author statement /// 2000369 // regulation of clathrin-mediated endocytosis // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // not recorded /// 0005942 // phosphatidylinositol 3-kinase complex // not recorded </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // not recorded /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0035004 // phosphatidylinositol 3-kinase activity // traceable author statement /// 0035005 // 1-phosphatidylinositol-4-phosphate 3-kinase activity // not recorded /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation /// 0046934 // phosphatidylinositol-4,5-bisphosphate 3-kinase activity // not recorded </td> <td> 34.40 </td> <td> 68.95 </td> <td> 3.89 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 207483_s_at </td> <td> 207483_s_at </td> <td> NM_018448 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018448.1 /DEF=Homo sapiens TIP120 protein (TIP120), mRNA. /FEA=mRNA /GEN=TIP120 /PROD=TIP120 protein /DB_XREF=gi:8924259 /UG=Hs.283668 TIP120 protein /FL=gb:AF157326.1 gb:NM_018448.1 </td> <td> NM_018448 </td> <td> cullin-associated and neddylation-dissociated 1 </td> <td> CAND1 </td> <td> 55832 </td> <td> NM_018448 </td> <td> 0010265 // SCF complex assembly // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030154 // cell differentiation // inferred from direct assay /// 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045899 // positive regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from electronic annotation </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017025 // TBP-class protein binding // inferred from electronic annotation </td> <td> 43.10 </td> <td> 152.15 </td> <td> 3.88 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212538_at </td> <td> 212538_at </td> <td> AL576253 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL576253 /FEA=EST /DB_XREF=gi:12938214 /DB_XREF=est:AL576253 /CLONE=CS0DI073YM22 (3 prime) /UG=Hs.8021 KIAA1058 protein </td> <td> AL576253 </td> <td> dedicator of cytokinesis 9 </td> <td> DOCK9 </td> <td> 23348 </td> <td> NM_001130048 /// NM_001130049 /// NM_001130050 /// NM_015296 /// XM_005254034 /// XM_005254035 /// XM_005254036 /// XM_006719922 /// XM_006719923 /// XM_006719924 /// XM_006719925 /// XM_006719926 /// XM_006719927 /// XM_006719928 /// XM_006719929 /// XM_006719930 /// XM_006719931 /// XM_006719932 /// XM_006719933 /// XM_006719934 /// XM_006719935 /// XM_006719936 /// XM_006719937 /// XM_006719938 /// XM_006719939 /// XM_006719940 /// XM_006719941 /// XM_006719942 </td> <td> 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017048 // Rho GTPase binding // inferred from electronic annotation </td> <td> 149.10 </td> <td> 391.62 </td> <td> 3.88 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218508_at </td> <td> 218508_at </td> <td> NM_018403 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018403.1 /DEF=Homo sapiens transcription factor (SMIF gene) (HSA275986), mRNA. /FEA=mRNA /GEN=HSA275986 /PROD=transcription factor (SMIF gene) /DB_XREF=gi:8923766 /UG=Hs.71414 transcription factor (SMIF gene) /FL=gb:NM_018403.1 </td> <td> NM_018403 </td> <td> decapping mRNA 1A </td> <td> DCP1A </td> <td> 55802 </td> <td> NM_001290204 /// NM_001290205 /// NM_001290206 /// NM_001290207 /// NM_018403 /// XM_005265320 /// XM_005278359 /// XM_005278360 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -38.05 </td> <td> 204.62 </td> <td> -3.88 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203376_at </td> <td> 203376_at </td> <td> BG528818 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG528818 /FEA=EST /DB_XREF=gi:13520355 /DB_XREF=est:602579703F1 /CLONE=IMAGE:4713600 /UG=Hs.116674 pre-mRNA splicing factor 17 /FL=gb:AF038392.1 gb:AF061241.1 gb:NM_015891.1 </td> <td> BG528818 </td> <td> cell division cycle 40 </td> <td> CDC40 </td> <td> 51362 </td> <td> NM_015891 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 60.93 </td> <td> 155.11 </td> <td> 3.88 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218578_at </td> <td> 218578_at </td> <td> NM_024529 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024529.1 /DEF=Homo sapiens hypothetical protein FLJ23316 (FLJ23316), mRNA. /FEA=mRNA /GEN=FLJ23316 /PROD=hypothetical protein FLJ23316 /DB_XREF=gi:13375677 /UG=Hs.5722 hypothetical protein FLJ23316 /FL=gb:AF312865.1 gb:NM_024529.1 </td> <td> NM_024529 </td> <td> cell division cycle 73 </td> <td> CDC73 </td> <td> 79577 </td> <td> NM_024529 /// XM_006711537 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001711 // endodermal cell fate commitment // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006378 // mRNA polyadenylation // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010390 // histone monoubiquitination // inferred from direct assay /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt signaling pathway // inferred from direct assay /// 0031442 // positive regulation of mRNA 3'-end processing // inferred from mutant phenotype /// 0031648 // protein destabilization // inferred from mutant phenotype /// 0032968 // positive regulation of transcription elongation from RNA polymerase II promoter // inferred from direct assay /// 0033523 // histone H2B ubiquitination // inferred from direct assay /// 0045638 // negative regulation of myeloid cell differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from sequence or structural similarity /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0016593 // Cdc73/Paf1 complex // inferred from direct assay </td> <td> 0000993 // RNA polymerase II core binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> -54.25 </td> <td> 136.38 </td> <td> -3.88 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200839_s_at </td> <td> 200839_s_at </td> <td> NM_001908 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001908.1 /DEF=Homo sapiens cathepsin B (CTSB), mRNA. /FEA=mRNA /GEN=CTSB /PROD=cathepsin B /DB_XREF=gi:4503138 /UG=Hs.297939 cathepsin B /FL=gb:M14221.1 gb:L16510.1 gb:NM_001908.1 </td> <td> NM_001908 </td> <td> cathepsin B </td> <td> CTSB </td> <td> 1508 </td> <td> NM_001908 /// NM_147780 /// NM_147781 /// NM_147782 /// NM_147783 /// XM_006716244 /// XM_006716245 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0006508 // proteolysis // inferred from direct assay /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from direct assay /// 0030574 // collagen catabolic process // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0042981 // regulation of apoptotic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from expression pattern </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005622 // intracellular // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0036021 // endolysosome lumen // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008233 // peptidase activity // inferred from direct assay /// 0008234 // cysteine-type peptidase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043394 // proteoglycan binding // inferred from physical interaction </td> <td> -371.38 </td> <td> 1598.99 </td> <td> -3.88 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202146_at </td> <td> 202146_at </td> <td> AA747426 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA747426 /FEA=EST /DB_XREF=gi:2787384 /DB_XREF=est:nx88e08.s1 /CLONE=IMAGE:1269350 /UG=Hs.7879 interferon-related developmental regulator 1 /FL=gb:BC001272.1 gb:NM_001550.1 </td> <td> AA747426 </td> <td> interferon-related developmental regulator 1 </td> <td> IFRD1 </td> <td> 3475 </td> <td> NM_001007245 /// NM_001197079 /// NM_001197080 /// NM_001550 /// NR_120333 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007518 // myoblast fate determination // traceable author statement /// 0007527 // adult somatic muscle development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation </td> <td> -70.45 </td> <td> 121.72 </td> <td> -3.88 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212366_at </td> <td> 212366_at </td> <td> BF223237 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF223237 /FEA=EST /DB_XREF=gi:11130414 /DB_XREF=est:7q30h09.x1 /CLONE=IMAGE:3700073 /UG=Hs.173081 KIAA0530 protein </td> <td> BF223237 </td> <td> zinc finger protein 292 </td> <td> ZNF292 </td> <td> 23036 </td> <td> NM_015021 /// XM_005248697 /// XM_005248698 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -51.80 </td> <td> 62.65 </td> <td> -3.87 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212838_at </td> <td> 212838_at </td> <td> AB023227 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB023227.1 /DEF=Homo sapiens mRNA for KIAA1010 protein, partial cds. /FEA=mRNA /GEN=KIAA1010 /PROD=KIAA1010 protein /DB_XREF=gi:4589669 /UG=Hs.23860 KIAA1010 protein </td> <td> AB023227 </td> <td> dynamin binding protein </td> <td> DNMBP </td> <td> 23268 </td> <td> NM_015221 /// XM_006717735 /// XM_006717736 </td> <td> 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -71.70 </td> <td> 359.20 </td> <td> -3.87 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 205924_at </td> <td> 205924_at </td> <td> BC005035 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005035.1 /DEF=Homo sapiens, RAB3B, member RAS oncogene family, clone MGC:12720, mRNA, complete cds.  /FEA=mRNA /PROD=RAB3B, member RAS oncogene family /DB_XREF=gi:13477154 /UG=Hs.123072 RAB3B, member RAS oncogene family /FL=gb:BC005035.1 gb:NM_002867.1 gb:M28214.1 </td> <td> BC005035 </td> <td> RAB3B, member RAS oncogene family </td> <td> RAB3B </td> <td> 5865 </td> <td> NM_002867 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0017157 // regulation of exocytosis // inferred from electronic annotation /// 0018125 // peptidyl-cysteine methylation // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from mutant phenotype /// 0051586 // positive regulation of dopamine uptake involved in synaptic transmission // inferred from direct assay /// 0097494 // regulation of vesicle size // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay </td> <td> 39.70 </td> <td> 108.60 </td> <td> 3.87 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 214553_s_at </td> <td> 214553_s_at </td> <td> NM_006628 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_006628.1 /DEF=Homo sapiens cyclic AMP phosphoprotein, 19 kD (ARPP-19), mRNA. /FEA=CDS /GEN=ARPP-19 /PROD=cyclic AMP phosphoprotein, 19 kD /DB_XREF=gi:5729731 /UG=Hs.7351 cyclic AMP phosphoprotein, 19 kD /FL=gb:NM_006628.1 </td> <td> NM_006628 </td> <td> cAMP-regulated phosphoprotein, 19kDa </td> <td> ARPP19 </td> <td> 10776 </td> <td> NM_006628 /// XM_005254132 /// XM_005254133 /// XM_005254134 /// XM_005254135 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from mutant phenotype /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0045722 // positive regulation of gluconeogenesis // inferred from direct assay /// 0046326 // positive regulation of glucose import // non-traceable author statement /// 0050790 // regulation of catalytic activity // inferred from sequence or structural similarity /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // inferred from sequence or structural similarity /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0019212 // phosphatase inhibitor activity // inferred from sequence or structural similarity /// 0051721 // protein phosphatase 2A binding // inferred from sequence or structural similarity </td> <td> -43.85 </td> <td> 119.40 </td> <td> -3.87 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201363_s_at </td> <td> 201363_s_at </td> <td> AB020657 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB020657.1 /DEF=Homo sapiens mRNA for KIAA0850 protein, complete cds. /FEA=mRNA /GEN=KIAA0850 /PROD=KIAA0850 protein /DB_XREF=gi:4240188 /UG=Hs.197298 NS1-binding protein /FL=gb:AF205218.1 gb:AB020657.1 gb:AF161553.1 gb:NM_016389.1 </td> <td> AB020657 </td> <td> influenza virus NS1A binding protein </td> <td> IVNS1ABP </td> <td> 10625 </td> <td> NM_006469 /// NM_016389 /// XM_005244843 </td> <td> 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005667 // transcription factor complex // traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 52.75 </td> <td> 82.75 </td> <td> 3.87 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200965_s_at </td> <td> 200965_s_at </td> <td> NM_006720 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006720.1 /DEF=Homo sapiens actin binding LIM protein 1 (ABLIM), transcript variant ABLIM-s, mRNA.  /FEA=mRNA /GEN=ABLIM /PROD=actin-binding LIM protein 1, isoform s /DB_XREF=gi:5921987 /UG=Hs.158203 actin binding LIM protein 1 /FL=gb:D31883.1 gb:NM_006720.1 </td> <td> NM_006720 </td> <td> actin binding LIM protein 1 </td> <td> ABLIM1 </td> <td> 3983 </td> <td> NM_001003407 /// NM_001003408 /// NM_002313 /// NM_006720 /// XM_005269818 /// XM_005269819 /// XM_005269820 /// XM_005269821 /// XM_005269822 /// XM_005269823 /// XM_005269824 /// XM_005269825 /// XM_005269826 /// XM_005269827 /// XM_005269828 /// XM_005269830 /// XM_006717837 /// XM_006717838 /// XM_006717839 /// XM_006717840 /// XM_006717841 /// XM_006717842 /// XM_006717843 /// XM_006717844 /// XM_006717845 /// XM_006717846 /// XM_006717847 /// XM_006717848 </td> <td> 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 40.63 </td> <td> 207.69 </td> <td> 3.86 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208914_at </td> <td> 208914_at </td> <td> BE646414 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE646414 /FEA=EST /DB_XREF=gi:9970725 /DB_XREF=est:7e86d08.x1 /CLONE=IMAGE:3292047 /UG=Hs.155546 KIAA1080 protein; Golgi-associated, gamma-adaptin ear containing, ARF-binding protein 2 /FL=gb:AF190863.1 gb:AF233522.1 gb:AF165531.1 gb:NM_015044.1 </td> <td> BE646414 </td> <td> golgi-associated, gamma adaptin ear containing, ARF binding protein 2 </td> <td> GGA2 </td> <td> 23062 </td> <td> NM_015044 /// XR_429674 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030306 // ADP-ribosylation factor binding // inferred from direct assay </td> <td> 36.47 </td> <td> 84.74 </td> <td> 3.86 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203568_s_at </td> <td> 203568_s_at </td> <td> NM_006355 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006355.1 /DEF=Homo sapiens ring finger protein 15 (RNF15), mRNA. /FEA=mRNA /GEN=RNF15 /PROD=ring finger protein 15 /DB_XREF=gi:5454013 /UG=Hs.59545 ring finger protein 15 /FL=gb:U90547.1 gb:NM_006355.1 </td> <td> NM_006355 </td> <td> tripartite motif containing 38 </td> <td> TRIM38 </td> <td> 10475 </td> <td> NM_006355 /// XM_005248799 /// XM_005248800 /// XR_241880 </td> <td> 0007165 // signal transduction // inferred from mutant phenotype /// 0032648 // regulation of interferon-beta production // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0045070 // positive regulation of viral genome replication // inferred from electronic annotation /// 0046598 // positive regulation of viral entry into host cell // inferred from direct assay /// 0050687 // negative regulation of defense response to virus // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 38.20 </td> <td> 71.08 </td> <td> 3.86 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218224_at </td> <td> 218224_at </td> <td> NM_006029 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006029.2 /DEF=Homo sapiens paraneoplastic antigen MA1 (PNMA1), mRNA. /FEA=mRNA /GEN=PNMA1 /PROD=paraneoplastic antigen MA1 /DB_XREF=gi:11141858 /UG=Hs.194709 paraneoplastic antigen MA1 /FL=gb:AF037364.2 gb:NM_006029.2 </td> <td> NM_006029 </td> <td> paraneoplastic Ma antigen 1 </td> <td> PNMA1 </td> <td> 9240 </td> <td> NM_006029 </td> <td> 0002437 // inflammatory response to antigenic stimulus // inferred from sequence or structural similarity /// 0006915 // apoptotic process // non-traceable author statement /// 0007283 // spermatogenesis // non-traceable author statement /// 0007417 // central nervous system development // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 82.48 </td> <td> 318.44 </td> <td> 3.86 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 205580_s_at </td> <td> 205580_s_at </td> <td> D28481 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D28481.1 /DEF=Human mRNA for histamine H1 receptor, complete cds. /FEA=mRNA /PROD=histamine H1 receptor /DB_XREF=gi:457654 /UG=Hs.1570 histamine receptor H1 /FL=gb:NM_000861.2 gb:AF026261.1 gb:D28481.1 </td> <td> D28481 </td> <td> histamine receptor H1 </td> <td> HRH1 </td> <td> 3269 </td> <td> NM_000861 /// NM_001098211 /// NM_001098212 /// NM_001098213 </td> <td> 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007613 // memory // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0032962 // positive regulation of inositol trisphosphate biosynthetic process // inferred from sequence or structural similarity /// 0043114 // regulation of vascular permeability // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0048016 // inositol phosphate-mediated signaling // inferred from sequence or structural similarity /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048245 // eosinophil chemotaxis // inferred from electronic annotation /// 0071420 // cellular response to histamine // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004969 // histamine receptor activity // inferred from sequence or structural similarity </td> <td> -43.65 </td> <td> 94.80 </td> <td> -3.86 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212233_at </td> <td> 212233_at </td> <td> AL523076 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL523076 /FEA=EST /DB_XREF=gi:12786569 /DB_XREF=est:AL523076 /CLONE=CS0DC001YI12 (3 prime) /UG=Hs.82503 H.sapiens mRNA for 3UTR of unknown protein </td> <td> AL523076 </td> <td> microtubule-associated protein 1B </td> <td> MAP1B </td> <td> 4131 </td> <td> NM_005909 /// NM_032010 /// XM_005248507 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0001578 // microtubule bundle formation // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009987 // cellular process // inferred from direct assay /// 0016358 // dendrite development // inferred from electronic annotation /// 0032387 // negative regulation of intracellular transport // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0047497 // mitochondrion transport along microtubule // inferred from electronic annotation /// 0048675 // axon extension // inferred from electronic annotation /// 0061162 // establishment of monopolar cell polarity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 284.77 </td> <td> 737.71 </td> <td> 3.86 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202171_at </td> <td> 202171_at </td> <td> AU146275 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU146275 /FEA=EST /DB_XREF=gi:11007796 /DB_XREF=est:AU146275 /CLONE=HEMBB1000004 /UG=Hs.6557 zinc finger protein 161 /FL=gb:D28118.1 gb:NM_007146.1 </td> <td> AU146275 </td> <td> vascular endothelial zinc finger 1 </td> <td> VEZF1 </td> <td> 7716 </td> <td> NM_007146 /// XM_005257643 /// XM_005257644 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001885 // endothelial cell development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006968 // cellular defense response // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -46.95 </td> <td> 136.35 </td> <td> -3.86 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218136_s_at </td> <td> 218136_s_at </td> <td> NM_018579 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018579.1 /DEF=Homo sapiens mitochondrial solute carrier (LOC51312), mRNA. /FEA=mRNA /GEN=LOC51312 /PROD=hypothetical protein PRO1278 /DB_XREF=gi:8924027 /UG=Hs.300496 mitochondrial solute carrier /FL=gb:AF155660.1 gb:AF116630.1 gb:NM_018579.1 </td> <td> NM_018579 </td> <td> solute carrier family 25 (mitochondrial iron transporter), member 37 </td> <td> SLC25A37 </td> <td> 51312 </td> <td> NM_016612 /// XM_005273526 /// XM_006716352 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0034755 // iron ion transmembrane transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048250 // mitochondrial iron ion transport // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005381 // iron ion transmembrane transporter activity // inferred from electronic annotation </td> <td> -33.40 </td> <td> 75.92 </td> <td> -3.86 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209592_s_at </td> <td> 209592_s_at </td> <td> BC001264 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001264.1 /DEF=Homo sapiens, WD-repeat protein, clone MGC:5032, mRNA, complete cds.  /FEA=mRNA /PROD=WD-repeat protein /DB_XREF=gi:12654840 /UG=Hs.176600 WD-repeat protein /FL=gb:BC001264.1 </td> <td> BC001264 </td> <td> DDB1 and CUL4 associated factor 7 </td> <td> DCAF7 </td> <td> 10238 </td> <td> NM_001003725 /// NM_005828 /// NR_073585 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0016363 // nuclear matrix // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0080008 // Cul4-RING E3 ubiquitin ligase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -63.38 </td> <td> 101.21 </td> <td> -3.86 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201871_s_at </td> <td> 201871_s_at </td> <td> NM_015853 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015853.1 /DEF=Homo sapiens ORF (LOC51035), mRNA. /FEA=mRNA /GEN=LOC51035 /PROD=unknown protein LOC51035 /DB_XREF=gi:7705653 /UG=Hs.77868 ORF /FL=gb:BC000902.1 gb:M68864.1 gb:NM_015853.1 </td> <td> NM_015853 </td> <td> UBX domain protein 1 </td> <td> UBXN1 </td> <td> 51035 </td> <td> NM_001286077 /// NM_001286078 /// NM_015853 /// XM_005274033 </td> <td> 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // non-traceable author statement </td> <td> 0000502 // proteasome complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0034098 // Cdc48p-Npl4p-Ufd1p AAA ATPase complex // inferred from direct assay /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0051117 // ATPase binding // inferred from physical interaction /// 0071796 // K6-linked polyubiquitin binding // inferred from direct assay </td> <td> -96.07 </td> <td> 229.46 </td> <td> -3.86 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212626_x_at </td> <td> 212626_x_at </td> <td> AA664258 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA664258 /FEA=EST /DB_XREF=gi:2618249 /DB_XREF=est:ac08a08.s1 /CLONE=IMAGE:855830 /UG=Hs.182447 heterogeneous nuclear ribonucleoprotein C (C1C2) </td> <td> AA664258 </td> <td> heterogeneous nuclear ribonucleoprotein C (C1/C2) </td> <td> HNRNPC </td> <td> 3183 </td> <td> NM_001077442 /// NM_001077443 /// NM_004500 /// NM_031314 /// XM_006720124 /// XM_006720125 /// XM_006720126 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0045120 // pronucleus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003729 // mRNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008266 // poly(U) RNA binding // inferred from direct assay /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -172.70 </td> <td> 734.45 </td> <td> -3.85 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 217911_s_at </td> <td> 217911_s_at </td> <td> NM_004281 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004281.1 /DEF=Homo sapiens BCL2-associated athanogene 3 (BAG3), mRNA. /FEA=mRNA /GEN=BAG3 /PROD=BCL2-associated athanogene 3 /DB_XREF=gi:6631072 /UG=Hs.15259 BCL2-associated athanogene 3 /FL=gb:AF095193.2 gb:NM_004281.1 gb:AF127139.1 gb:AF071218.2 </td> <td> NM_004281 </td> <td> BCL2-associated athanogene 3 </td> <td> BAG3 </td> <td> 9531 </td> <td> NM_004281 /// XM_005270287 </td> <td> 0006457 // protein folding // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 0010664 // negative regulation of striated muscle cell apoptotic process // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 0050821 // protein stabilization // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation </td> <td> 119.40 </td> <td> 390.65 </td> <td> 3.85 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204689_at </td> <td> 204689_at </td> <td> NM_001529 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001529.1 /DEF=Homo sapiens hematopoietically expressed homeobox (HHEX), mRNA. /FEA=mRNA /GEN=HHEX /PROD=hematopoietically expressed homeobox /DB_XREF=gi:10835016 /UG=Hs.118651 hematopoietically expressed homeobox /FL=gb:NM_001529.1 gb:L16499.1 gb:NM_002729.1 </td> <td> NM_001529 </td> <td> hematopoietically expressed homeobox </td> <td> HHEX </td> <td> 3087 </td> <td> NM_002729 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002573 // myeloid leukocyte differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0009611 // response to wounding // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0010621 // negative regulation of transcription by transcription factor localization // inferred by curator /// 0010944 // negative regulation of transcription by competitive promoter binding // traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from sequence or structural similarity /// 0016973 // poly(A)+ mRNA export from nucleus // inferred from mutant phenotype /// 0022027 // interkinetic nuclear migration // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred by curator /// 0030177 // positive regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0030183 // B cell differentiation // inferred from sequence or structural similarity /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030948 // negative regulation of vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0031016 // pancreas development // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048729 // tissue morphogenesis // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from electronic annotation /// 0060431 // primary lung bud formation // inferred from electronic annotation /// 0061009 // common bile duct development // inferred from electronic annotation /// 0061010 // gall bladder development // inferred from electronic annotation /// 0061011 // hepatic duct development // inferred from electronic annotation /// 0061017 // hepatoblast differentiation // inferred from electronic annotation /// 0070365 // hepatocyte differentiation // inferred from electronic annotation /// 0071103 // DNA conformation change // inferred from direct assay /// 0090009 // primitive streak formation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0032993 // protein-DNA complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008190 // eukaryotic initiation factor 4E binding // inferred from direct assay /// 0008301 // DNA binding, bending // inferred from direct assay /// 0017025 // TBP-class protein binding // traceable author statement /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // traceable author statement /// 0070491 // repressing transcription factor binding // inferred from direct assay /// 0071837 // HMG box domain binding // inferred from electronic annotation </td> <td> -90.37 </td> <td> 381.49 </td> <td> -3.85 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213039_at </td> <td> 213039_at </td> <td> AB011093 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB011093.1 /DEF=Homo sapiens mRNA for KIAA0521 protein, partial cds. /FEA=mRNA /GEN=KIAA0521 /PROD=KIAA0521 protein /DB_XREF=gi:3043565 /UG=Hs.6150 Rho-specific guanine nucleotide exchange factor p114 </td> <td> AB011093 </td> <td> Rho/Rac guanine nucleotide exchange factor (GEF) 18 </td> <td> ARHGEF18 </td> <td> 23370 </td> <td> NM_001130955 /// NM_015318 /// XM_005272464 /// XM_005272465 /// XM_006722705 /// XM_006722706 /// XM_006722707 /// XM_006722708 /// XM_006722709 </td> <td> 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008360 // regulation of cell shape // inferred from direct assay /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043087 // regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // traceable author statement /// 0045177 // apical part of cell // inferred from direct assay </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> 45.65 </td> <td> 149.97 </td> <td> 3.85 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209544_at </td> <td> 209544_at </td> <td> AF027706 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF027706.1 /DEF=Homo sapiens serinethreonine kinase RICK (RICK) mRNA, complete cds.  /FEA=mRNA /GEN=RICK /PROD=serinethreonine kinase RICK /DB_XREF=gi:3123886 /UG=Hs.103755 receptor-interacting serine-threonine kinase 2 /FL=gb:BC004553.1 gb:AF027706.1 gb:AF064824.1 gb:AF078530.1 gb:NM_003821.1 </td> <td> AF027706 </td> <td> receptor-interacting serine-threonine kinase 2 </td> <td> RIPK2 </td> <td> 8767 </td> <td> NM_003821 /// XM_005251092 </td> <td> 0000187 // activation of MAPK activity // traceable author statement /// 0001961 // positive regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002250 // adaptive immune response // inferred from sequence or structural similarity /// 0002376 // immune system process // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // inferred from sequence or structural similarity /// 0007254 // JNK cascade // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from mutant phenotype /// 0031398 // positive regulation of protein ubiquitination // non-traceable author statement /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032722 // positive regulation of chemokine production // inferred from electronic annotation /// 0032727 // positive regulation of interferon-alpha production // non-traceable author statement /// 0032728 // positive regulation of interferon-beta production // non-traceable author statement /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032735 // positive regulation of interleukin-12 production // non-traceable author statement /// 0032743 // positive regulation of interleukin-2 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0033091 // positive regulation of immature T cell proliferation // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034134 // toll-like receptor 2 signaling pathway // inferred from direct assay /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0045087 // innate immune response // inferred from direct assay /// 0045087 // innate immune response // inferred from sequence or structural similarity /// 0045087 // innate immune response // traceable author statement /// 0045627 // positive regulation of T-helper 1 cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070427 // nucleotide-binding oligomerization domain containing 1 signaling pathway // inferred from electronic annotation /// 0070431 // nucleotide-binding oligomerization domain containing 2 signaling pathway // inferred from direct assay /// 0070555 // response to interleukin-1 // inferred from electronic annotation /// 0070671 // response to interleukin-12 // inferred from electronic annotation /// 0070673 // response to interleukin-18 // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071223 // cellular response to lipoteichoic acid // inferred from electronic annotation /// 0071224 // cellular response to peptidoglycan // inferred from electronic annotation /// 0071225 // cellular response to muramyl dipeptide // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from direct assay /// 0031982 // vesicle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030274 // LIM domain binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0050700 // CARD domain binding // inferred from direct assay /// 0050700 // CARD domain binding // inferred from physical interaction </td> <td> -41.02 </td> <td> 34.91 </td> <td> -3.85 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208936_x_at </td> <td> 208936_x_at </td> <td> AF074000 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF074000.1 /DEF=Homo sapiens Po66 carbohydrate binding protein mRNA, complete cds. /FEA=mRNA /PROD=Po66 carbohydrate binding protein /DB_XREF=gi:5577965 /UG=Hs.4082 lectin, galactoside-binding, soluble, 8 (galectin 8) /FL=gb:AF342815.1 gb:L78132.1 gb:AF074000.1 gb:NM_006499.1 </td> <td> AF074000 </td> <td> lectin, galactoside-binding, soluble, 8 </td> <td> LGALS8 </td> <td> 3964 </td> <td> NM_006499 /// NM_201543 /// NM_201544 /// NM_201545 </td> <td> 0002317 // plasma cell differentiation // inferred from electronic annotation /// 0031295 // T cell costimulation // inferred from electronic annotation </td> <td> 0005615 // extracellular space // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> -45.28 </td> <td> 85.71 </td> <td> -3.85 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208901_s_at </td> <td> 208901_s_at </td> <td> J03250 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:J03250.1 /DEF=Human topoisomerase I mRNA, complete cds. /FEA=mRNA /GEN=TOP1 /DB_XREF=gi:339805 /UG=Hs.317 topoisomerase (DNA) I /FL=gb:NM_003286.1 gb:J03250.1 </td> <td> J03250 </td> <td> topoisomerase (DNA) I </td> <td> TOP1 </td> <td> 7150 </td> <td> NM_003286 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006260 // DNA replication // not recorded /// 0006265 // DNA topological change // not recorded /// 0006265 // DNA topological change // inferred from direct assay /// 0006338 // chromatin remodeling // not recorded /// 0007059 // chromosome segregation // not recorded /// 0012501 // programmed cell death // non-traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016310 // phosphorylation // non-traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0040016 // embryonic cleavage // inferred from electronic annotation /// 0042493 // response to drug // inferred from expression pattern </td> <td> 0000228 // nuclear chromosome // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031298 // replication fork protection complex // not recorded /// 0043204 // perikaryon // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from direct assay /// 0003916 // DNA topoisomerase activity // inferred from electronic annotation /// 0003917 // DNA topoisomerase type I activity // inferred from direct assay /// 0003917 // DNA topoisomerase type I activity // inferred from mutant phenotype /// 0003918 // DNA topoisomerase type II (ATP-hydrolyzing) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 148.35 </td> <td> 468.88 </td> <td> 3.85 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213289_at </td> <td> 213289_at </td> <td> BE221922 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE221922 /FEA=EST /DB_XREF=gi:8909343 /DB_XREF=est:hu04g12.x1 /CLONE=IMAGE:3165670 /UG=Hs.5181 proliferation-associated 2G4, 38kD </td> <td> BE221922 </td> <td> apolipoprotein O-like </td> <td> APOOL </td> <td> 139322 </td> <td> NM_198450 /// XM_005262080 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 50.83 </td> <td> 70.71 </td> <td> 3.85 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 220768_s_at </td> <td> 220768_s_at </td> <td> NM_004384 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004384.1 /DEF=Homo sapiens casein kinase 1, gamma 3 (CSNK1G3), mRNA. /FEA=mRNA /GEN=CSNK1G3 /PROD=casein kinase 1, gamma 3 /DB_XREF=gi:4758079 /UG=Hs.129206 casein kinase 1, gamma 3 /FL=gb:AF049089.1 gb:NM_004384.1 </td> <td> NM_004384 </td> <td> casein kinase 1, gamma 3 </td> <td> CSNK1G3 </td> <td> 1456 </td> <td> NM_001031812 /// NM_001044722 /// NM_001044723 /// NM_001270572 /// NM_001270573 /// NM_001270574 /// NM_004384 /// XM_005271891 /// XM_005271892 /// XM_005271893 /// XM_005271894 /// XM_005271895 /// XM_005271896 </td> <td> 0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -74.15 </td> <td> 186.43 </td> <td> -3.85 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221840_at </td> <td> 221840_at </td> <td> AA775177 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA775177 /FEA=EST /DB_XREF=gi:2834511 /DB_XREF=est:ac79a06.s1 /CLONE=IMAGE:868786 /UG=Hs.31137 protein tyrosine phosphatase, receptor type, E /FL=gb:NM_006504.1 </td> <td> AA775177 </td> <td> protein tyrosine phosphatase, receptor type, E </td> <td> PTPRE </td> <td> 5791 </td> <td> NM_006504 /// NM_130435 /// XM_005252691 /// XM_005252692 /// XM_006717932 </td> <td> 0006470 // protein dephosphorylation // traceable author statement /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0033003 // regulation of mast cell activation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation </td> <td> 126.72 </td> <td> 389.99 </td> <td> 3.84 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 214439_x_at </td> <td> 214439_x_at </td> <td> AF043899 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF043899.1 /DEF=Homo sapiens amphiphysin IIc1 mRNA, complete cds. /FEA=CDS /PROD=amphiphysin IIc1 /DB_XREF=gi:3064256 /UG=Hs.193163 bridging integrator 1 /FL=gb:AF043899.1 </td> <td> AF043899 </td> <td> bridging integrator 1 </td> <td> BIN1 </td> <td> 274 </td> <td> NM_004305 /// NM_139343 /// NM_139344 /// NM_139345 /// NM_139346 /// NM_139347 /// NM_139348 /// NM_139349 /// NM_139350 /// NM_139351 /// XM_005263642 /// XM_005263643 /// XM_005263644 /// XM_005263645 /// XM_005263646 /// XM_005263647 /// XM_005263648 /// XM_006712424 /// XM_006712425 /// XM_006712426 /// XM_006712427 /// XM_006712428 /// XM_006712429 /// XM_006712430 /// XM_006712431 /// XM_006712432 /// XM_006712433 /// XM_006712434 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from mutant phenotype /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from mutant phenotype /// 0060988 // lipid tube assembly // inferred from mutant phenotype /// 0071156 // regulation of cell cycle arrest // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030315 // T-tubule // inferred from sequence or structural similarity /// 0030424 // axon // inferred from direct assay /// 0031674 // I band // inferred from sequence or structural similarity /// 0033268 // node of Ranvier // inferred from sequence or structural similarity /// 0043194 // axon initial segment // inferred from sequence or structural similarity /// 0043196 // varicosity // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0044300 // cerebellar mossy fiber // inferred from electronic annotation /// 0060987 // lipid tube // inferred from mutant phenotype </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from physical interaction /// 0051020 // GTPase binding // inferred from electronic annotation </td> <td> -69.00 </td> <td> 142.03 </td> <td> -3.84 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 206710_s_at </td> <td> 206710_s_at </td> <td> NM_012307 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012307.1 /DEF=Homo sapiens differentially expressed in adenocarcinoma of the lung (KIAA0987), mRNA.  /FEA=mRNA /GEN=KIAA0987 /PROD=differentially expressed in adenocarcinoma ofthe lung /DB_XREF=gi:6912469 /UG=Hs.103839 erythrocyte membrane protein band 4.1-like 3 /FL=gb:AF069072.1 gb:NM_012307.1 </td> <td> NM_012307 </td> <td> erythrocyte membrane protein band 4.1-like 3 </td> <td> EPB41L3 </td> <td> 23136 </td> <td> NM_001281533 /// NM_001281534 /// NM_001281535 /// NM_012307 /// XM_005258085 /// XM_005258086 /// XM_005258087 /// XM_005258088 /// XM_005258089 /// XM_005258090 /// XM_005258091 /// XM_006722301 /// XM_006722302 /// XM_006722303 /// XM_006722304 /// XM_006722305 /// XM_006722306 /// XM_006722307 /// XM_006722308 /// XM_006722309 /// XM_006722310 /// XM_006722311 /// XM_006722312 /// XM_006722313 /// XM_006722314 /// XM_006722315 /// XM_006722316 </td> <td> 0002175 // protein localization to paranode region of axon // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007016 // cytoskeletal anchoring at plasma membrane // traceable author statement /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0030865 // cortical cytoskeleton organization // traceable author statement /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0030913 // paranodal junction assembly // inferred from sequence or structural similarity /// 0043217 // myelin maintenance // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0071205 // protein localization to juxtaparanode region of axon // inferred from sequence or structural similarity /// 0072659 // protein localization to plasma membrane // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030673 // axolemma // inferred from sequence or structural similarity /// 0033270 // paranode region of axon // inferred from sequence or structural similarity /// 0044224 // juxtaparanode region of axon // inferred from sequence or structural similarity </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation </td> <td> -99.90 </td> <td> 248.68 </td> <td> -3.84 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201376_s_at </td> <td> 201376_s_at </td> <td> AI591354 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI591354 /FEA=EST /DB_XREF=gi:4600402 /DB_XREF=est:ts10e04.x1 /CLONE=IMAGE:2228190 /UG=Hs.808 heterogeneous nuclear ribonucleoprotein F /FL=gb:BC001432.1 gb:L28010.1 gb:NM_004966.1 </td> <td> AI591354 </td> <td> heterogeneous nuclear ribonucleoprotein F </td> <td> HNRNPF </td> <td> 3185 </td> <td> NM_001098204 /// NM_001098205 /// NM_001098206 /// NM_001098207 /// NM_001098208 /// NM_004966 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0043484 // regulation of RNA splicing // inferred from mutant phenotype </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 48.52 </td> <td> 200.44 </td> <td> 3.84 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204948_s_at </td> <td> 204948_s_at </td> <td> NM_013409 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013409.1 /DEF=Homo sapiens follistatin (FST), transcript variant FST344, mRNA. /FEA=mRNA /GEN=FST /PROD=follistatin isoform FST344 precursor /DB_XREF=gi:7242221 /UG=Hs.9914 follistatin /FL=gb:BC004107.1 gb:NM_013409.1 </td> <td> NM_013409 </td> <td> follistatin </td> <td> FST </td> <td> 10468 </td> <td> NM_006350 /// NM_013409 /// XM_005248400 /// XM_005248401 /// XM_005248402 /// XM_005248403 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002244 // hematopoietic progenitor cell differentiation // inferred from direct assay /// 0007276 // gamete generation // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0032926 // negative regulation of activin receptor signaling pathway // inferred from direct assay /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043616 // keratinocyte proliferation // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0046882 // negative regulation of follicle-stimulating hormone secretion // non-traceable author statement /// 0051798 // positive regulation of hair follicle development // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043395 // heparan sulfate proteoglycan binding // inferred from electronic annotation /// 0048185 // activin binding // inferred from physical interaction </td> <td> -33.77 </td> <td> 93.21 </td> <td> -3.84 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 214960_at </td> <td> 214960_at </td> <td> AF229253 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF229253.1 /DEF=Homo sapiens clone FIF N1 fibroblast growth factor 2-interacting factor (API5) mRNA, partial cds.; alternatively spliced.  /FEA=mRNA /GEN=API5 /PROD=fibroblast growth factor 2-interacting factor /DB_XREF=gi:12656082 /UG=Hs.227913 API5-like 1 </td> <td> AF229253 </td> <td> apoptosis inhibitor 5 </td> <td> API5 </td> <td> 8539 </td> <td> NM_001142930 /// NM_001142931 /// NM_001243747 /// NM_006595 /// NR_024625 /// XM_006718359 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 2000270 // negative regulation of fibroblast apoptotic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 35.85 </td> <td> 35.57 </td> <td> 3.84 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 220248_x_at </td> <td> 220248_x_at </td> <td> NM_018839 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018839.1 /DEF=Homo sapiens p47 protein (LOC55968), mRNA. /FEA=mRNA /GEN=LOC55968 /PROD=p47 protein /DB_XREF=gi:10047113 /UG=Hs.284261 p47 protein /FL=gb:NM_018839.1 gb:AF112211.1 </td> <td> NM_018839 </td> <td> NSFL1 (p97) cofactor (p47) </td> <td> NSFL1C </td> <td> 55968 </td> <td> NM_001206736 /// NM_016143 /// NM_018839 /// NM_182483 /// NR_038164 /// XM_006723591 /// XM_006723592 /// XM_006723593 /// XM_006723594 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation </td> <td> -45.30 </td> <td> 230.15 </td> <td> -3.84 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 211098_x_at </td> <td> 211098_x_at </td> <td> AF277194 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF277194.1 /DEF=Homo sapiens PNAS-136 mRNA, complete cds. /FEA=mRNA /PROD=PNAS-136 /DB_XREF=gi:12751112 /UG=Hs.93832 putative membrane protein /FL=gb:AF277194.1 </td> <td> AF277194 </td> <td> transmembrane and coiled-coil domains 1 </td> <td> TMCO1 </td> <td> 54499 </td> <td> NM_001256164 /// NM_001256165 /// NM_019026 /// NR_045818 </td> <td>  </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 43.38 </td> <td> 123.94 </td> <td> 3.83 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204842_x_at </td> <td> 204842_x_at </td> <td> BC002763 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002763.1 /DEF=Homo sapiens, Similar to protein kinase, cAMP-dependent, regulatory, type II, alpha, clone MGC:3606, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to protein kinase, cAMP-dependent,regulatory, type II, alpha /DB_XREF=gi:12803842 /UG=Hs.289075 protein kinase, cAMP-dependent, regulatory, type II, alpha /FL=gb:BC002763.1 gb:NM_004157.1 </td> <td> BC002763 </td> <td> protein kinase, cAMP-dependent, regulatory, type II, alpha </td> <td> PRKAR2A </td> <td> 5576 </td> <td> NM_004157 /// XM_005265313 /// XM_005265314 /// XM_005265315 /// XR_427280 </td> <td> 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 2000480 // negative regulation of cAMP-dependent protein kinase activity // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005952 // cAMP-dependent protein kinase complex // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from direct assay /// 0008603 // cAMP-dependent protein kinase regulator activity // non-traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0034236 // protein kinase A catalytic subunit binding // inferred from physical interaction </td> <td> 39.70 </td> <td> 208.53 </td> <td> 3.83 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212377_s_at </td> <td> 212377_s_at </td> <td> AU158495 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU158495 /FEA=EST /DB_XREF=gi:11020016 /DB_XREF=est:AU158495 /CLONE=PLACE3000066 /UG=Hs.8121 Notch (Drosophila) homolog 2 </td> <td> AU158495 </td> <td> notch 2 </td> <td> NOTCH2 </td> <td> 4853 </td> <td> NM_001200001 /// NM_024408 /// XM_005270901 /// XM_005270902 /// XM_006710667 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001709 // cell fate determination // traceable author statement /// 0001890 // placenta development // inferred from electronic annotation /// 0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0002437 // inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0003184 // pulmonary valve morphogenesis // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009887 // organ morphogenesis // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016049 // cell growth // inferred from direct assay /// 0019827 // stem cell maintenance // traceable author statement /// 0030097 // hemopoiesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030522 // intracellular receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0046579 // positive regulation of Ras protein signal transduction // inferred from direct assay /// 0046849 // bone remodeling // inferred from mutant phenotype /// 0050793 // regulation of developmental process // inferred from electronic annotation /// 0060413 // atrial septum morphogenesis // inferred from mutant phenotype /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0061314 // Notch signaling involved in heart development // inferred by curator /// 0072602 // interleukin-4 secretion // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0004872 // receptor activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0038049 // ligand-activated RNA polymerase II transcription factor binding transcription factor activity // traceable author statement </td> <td> -71.73 </td> <td> 210.09 </td> <td> -3.83 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208734_x_at </td> <td> 208734_x_at </td> <td> M28213 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M28213.1 /DEF=Homo sapiens GTP-binding protein (RAB2) mRNA, complete cds. /FEA=mRNA /GEN=RAB2 /PROD=GTP-binding protein /DB_XREF=gi:550061 /UG=Hs.78305 RAB2, member RAS oncogene family /FL=gb:NM_002865.1 gb:M28213.1 </td> <td> M28213 </td> <td> RAB2A, member RAS oncogene family </td> <td> RAB2A </td> <td> 5862 </td> <td> NM_001242644 /// NM_002865 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0019003 // GDP binding // inferred from direct assay </td> <td> -61.68 </td> <td> 325.04 </td> <td> -3.83 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212756_s_at </td> <td> 212756_s_at </td> <td> AI761518 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI761518 /FEA=EST /DB_XREF=gi:5177185 /DB_XREF=est:wi61d01.x1 /CLONE=IMAGE:2394721 /UG=Hs.15303 KIAA0349 protein </td> <td> AI761518 </td> <td> ubiquitin protein ligase E3 component n-recognin 2 </td> <td> UBR2 </td> <td> 23304 </td> <td> NM_001184801 /// NM_015255 /// XM_005248965 /// XM_005248966 </td> <td> 0006342 // chromatin silencing // inferred from sequence or structural similarity /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling // inferred from mutant phenotype /// 0033522 // histone H2A ubiquitination // inferred from sequence or structural similarity /// 0071233 // cellular response to leucine // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070728 // leucine binding // inferred from direct assay </td> <td> -47.77 </td> <td> 76.59 </td> <td> -3.83 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203989_x_at </td> <td> 203989_x_at </td> <td> NM_001992 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001992.2 /DEF=Homo sapiens coagulation factor II (thrombin) receptor (F2R), mRNA. /FEA=mRNA /GEN=F2R /PROD=coagulation factor II receptor precursor /DB_XREF=gi:6031164 /UG=Hs.128087 coagulation factor II (thrombin) receptor /FL=gb:BC002464.1 gb:M62424.1 gb:NM_001992.2 </td> <td> NM_001992 </td> <td> coagulation factor II (thrombin) receptor </td> <td> F2R </td> <td> 2149 </td> <td> NM_001992 </td> <td> 0000186 // activation of MAPKK activity // inferred from sequence or structural similarity /// 0002248 // connective tissue replacement involved in inflammatory response wound healing // inferred from direct assay /// 0003105 // negative regulation of glomerular filtration // inferred from sequence or structural similarity /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from sequence or structural similarity /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007260 // tyrosine phosphorylation of STAT protein // inferred from direct assay /// 0007262 // STAT protein import into nucleus // inferred from direct assay /// 0007529 // establishment of synaptic specificity at neuromuscular junction // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009611 // response to wounding // inferred from direct assay /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from sequence or structural similarity /// 0016265 // death // inferred from electronic annotation /// 0030168 // platelet activation // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030193 // regulation of blood coagulation // inferred from direct assay /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032651 // regulation of interleukin-1 beta production // inferred from sequence or structural similarity /// 0032967 // positive regulation of collagen biosynthetic process // inferred from direct assay /// 0035025 // positive regulation of Rho protein signal transduction // inferred from sequence or structural similarity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045907 // positive regulation of vasoconstriction // inferred from sequence or structural similarity /// 0045987 // positive regulation of smooth muscle contraction // inferred from sequence or structural similarity /// 0046427 // positive regulation of JAK-STAT cascade // inferred from direct assay /// 0048873 // homeostasis of number of cells within a tissue // inferred from sequence or structural similarity /// 0051209 // release of sequestered calcium ion into cytosol // inferred from sequence or structural similarity /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051482 // positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from sequence or structural similarity /// 0051928 // positive regulation of calcium ion transport // inferred from sequence or structural similarity /// 0051930 // regulation of sensory perception of pain // inferred from sequence or structural similarity /// 0060155 // platelet dense granule organization // inferred by curator /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070493 // thrombin receptor signaling pathway // inferred from electronic annotation /// 1900134 // negative regulation of renin secretion into blood stream // inferred from sequence or structural similarity /// 2000484 // positive regulation of interleukin-8 secretion // inferred from direct assay /// 2000778 // positive regulation of interleukin-6 secretion // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031094 // platelet dense tubular network // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from sequence or structural similarity /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity </td> <td> 0001965 // G-protein alpha-subunit binding // inferred from sequence or structural similarity /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from sequence or structural similarity /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0015057 // thrombin receptor activity // inferred from direct assay /// 0031681 // G-protein beta-subunit binding // inferred from sequence or structural similarity </td> <td> 214.45 </td> <td> 379.20 </td> <td> 3.83 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201410_at </td> <td> 201410_at </td> <td> AI983043 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI983043 /FEA=EST /DB_XREF=gi:5810262 /DB_XREF=est:wz30b11.x1 /CLONE=IMAGE:2559549 /UG=Hs.246885 hypothetical protein FLJ20783 /FL=gb:NM_017958.1 </td> <td> AI983043 </td> <td> pleckstrin homology domain containing, family B (evectins) member 2 </td> <td> PLEKHB2 </td> <td> 55041 </td> <td> NM_001031706 /// NM_001100623 /// NM_001267062 /// NM_001267063 /// NM_001267064 /// NM_001267065 /// NM_001267066 /// NM_001267067 /// NM_001267068 /// NM_017958 /// NR_049789 /// NR_049790 /// NR_049791 /// NR_049792 /// XM_006712607 </td> <td>  </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation </td> <td>  </td> <td> 111.48 </td> <td> 371.56 </td> <td> 3.83 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 57082_at </td> <td> 57082_at </td> <td> AA169780 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AA169780:zp21a04.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-610062 /clone_end=3' /gb=AA169780 /gi=1748115 /ug=Hs.184482 /len=560 </td> <td> AA169780 </td> <td> low density lipoprotein receptor adaptor protein 1 </td> <td> LDLRAP1 </td> <td> 26119 </td> <td> NM_015627 /// XM_006710558 /// XM_006710559 /// XM_006710560 /// XM_006710561 /// XM_006710562 /// XR_426598 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // non-traceable author statement /// 0009967 // positive regulation of signal transduction // inferred from direct assay /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0042632 // cholesterol homeostasis // inferred from mutant phenotype /// 0042982 // amyloid precursor protein metabolic process // inferred from mutant phenotype /// 0043393 // regulation of protein binding // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from mutant phenotype /// 0090003 // regulation of establishment of protein localization to plasma membrane // inferred from mutant phenotype /// 0090118 // receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport // inferred from mutant phenotype /// 0090205 // positive regulation of cholesterol metabolic process // inferred by curator </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005883 // neurofilament // inferred from sequence or structural similarity /// 0009898 // cytoplasmic side of plasma membrane // inferred from direct assay /// 0009925 // basal plasma membrane // inferred from direct assay /// 0030121 // AP-1 adaptor complex // inferred from direct assay /// 0030122 // AP-2 adaptor complex // inferred from direct assay /// 0030424 // axon // inferred from sequence or structural similarity /// 0055037 // recycling endosome // inferred from direct assay </td> <td> 0001540 // beta-amyloid binding // inferred from physical interaction /// 0001784 // phosphotyrosine binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0030159 // receptor signaling complex scaffold activity // inferred from mutant phenotype /// 0030276 // clathrin binding // inferred from direct assay /// 0035591 // signaling adaptor activity // inferred from direct assay /// 0035612 // AP-2 adaptor complex binding // inferred from direct assay /// 0035615 // clathrin adaptor activity // inferred from direct assay /// 0050750 // low-density lipoprotein particle receptor binding // inferred from physical interaction </td> <td> 48.92 </td> <td> 94.11 </td> <td> 3.82 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201206_s_at </td> <td> 201206_s_at </td> <td> NM_004587 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004587.1 /DEF=Homo sapiens ribosome binding protein 1 (dog 180kD homolog) (RRBP1), mRNA.  /FEA=mRNA /GEN=RRBP1 /PROD=ribosome binding protein 1 /DB_XREF=gi:4759055 /UG=Hs.98614 ribosome binding protein 1 (dog 180kD homolog) /FL=gb:AF006751.1 gb:NM_004587.1 </td> <td> NM_004587 </td> <td> ribosome binding protein 1 </td> <td> RRBP1 </td> <td> 6238 </td> <td> NM_001042576 /// NM_004587 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006412 // translation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005840 // ribosome // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 50.15 </td> <td> 122.55 </td> <td> 3.82 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 217885_at </td> <td> 217885_at </td> <td> NM_018085 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018085.1 /DEF=Homo sapiens hypothetical protein FLJ10402 (FLJ10402), mRNA. /FEA=mRNA /GEN=FLJ10402 /PROD=hypothetical protein FLJ10402 /DB_XREF=gi:8922404 /UG=Hs.7579 hypothetical protein FLJ10402 /FL=gb:BC003604.1 gb:NM_018085.1 </td> <td> NM_018085 </td> <td> importin 9 </td> <td> IPO9 </td> <td> 55705 </td> <td> NM_018085 /// XM_006711440 </td> <td> 0006606 // protein import into nucleus // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from direct assay /// 0042393 // histone binding // inferred from sequence or structural similarity </td> <td> 79.80 </td> <td> 241.03 </td> <td> 3.82 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204745_x_at </td> <td> 204745_x_at </td> <td> NM_005950 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005950.1 /DEF=Homo sapiens metallothionein 1G (MT1G), mRNA. /FEA=mRNA /GEN=MT1G /PROD=metallothionein 1G /DB_XREF=gi:10835229 /UG=Hs.173451 metallothionein 1G /FL=gb:NM_005950.1 </td> <td> NM_005950 </td> <td> metallothionein 1G </td> <td> MT1G </td> <td> 4495 </td> <td> NM_005950 </td> <td> 0030224 // monocyte differentiation // non-traceable author statement /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from expression pattern /// 0042117 // monocyte activation // non-traceable author statement /// 0045926 // negative regulation of growth // inferred from direct assay /// 0071276 // cellular response to cadmium ion // inferred from expression pattern /// 0071280 // cellular response to copper ion // inferred from expression pattern /// 0071294 // cellular response to zinc ion // inferred from direct assay /// 0071294 // cellular response to zinc ion // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -1060.75 </td> <td> 1481.77 </td> <td> -3.82 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 210692_s_at </td> <td> 210692_s_at </td> <td> BC003163 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003163.1 /DEF=Homo sapiens, Similar to selectively expressed in embryonic epithelia protein-1, clone MGC:4220, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to selectively expressed in embryonicepithelia protein-1 /DB_XREF=gi:13111980 /UG=Hs.274453 hypothetical protein DKFZp762A227 /FL=gb:BC003163.1 </td> <td> BC003163 </td> <td> solute carrier family 43, member 3 </td> <td> SLC43A3 </td> <td> 29015 </td> <td> NM_001278201 /// NM_001278206 /// NM_014096 /// NM_017611 /// NM_199329 </td> <td> 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -51.80 </td> <td> 141.50 </td> <td> -3.82 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 214290_s_at </td> <td> 214290_s_at </td> <td> AI313324 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI313324 /FEA=EST /DB_XREF=gi:4018929 /DB_XREF=est:ta77f02.x2 /CLONE=IMAGE:2050107 /UG=Hs.795 H2A histone family, member O </td> <td> AI313324 </td> <td> histone cluster 2, H2aa3 /// histone cluster 2, H2aa4 </td> <td> HIST2H2AA3 /// HIST2H2AA4 </td> <td> 8337 /// 723790 </td> <td> NM_001040874 /// NM_003516 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation </td> <td> 0000786 // nucleosome // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -53.10 </td> <td> 81.03 </td> <td> -3.82 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209449_at </td> <td> 209449_at </td> <td> AF196468 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF196468.1 /DEF=Homo sapiens SMX5-like protein mRNA, complete cds. /FEA=mRNA /PROD=SMX5-like protein /DB_XREF=gi:11225486 /UG=Hs.103106 U6 snRNA-associated Sm-like protein /FL=gb:NM_021177.1 gb:AF196468.1 gb:AF136977.1 gb:AF182288.1 </td> <td> AF196468 </td> <td> LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) </td> <td> LSM2 </td> <td> 57819 </td> <td> NM_021177 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017070 // U6 snRNA binding // non-traceable author statement /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 49.22 </td> <td> 132.11 </td> <td> 3.82 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212015_x_at </td> <td> 212015_x_at </td> <td> BF690062 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF690062 /FEA=EST /DB_XREF=gi:11975470 /DB_XREF=est:602186366T1 /CLONE=IMAGE:4298440 /UG=Hs.172550 polypyrimidine tract binding protein (heterogeneous nuclear ribonucleoprotein I) </td> <td> BF690062 </td> <td> microRNA 4745 /// polypyrimidine tract binding protein 1 </td> <td> MIR4745 /// PTBP1 </td> <td> 5725 /// 100616459 </td> <td> NM_002819 /// NM_031990 /// NM_031991 /// NM_175847 /// NR_039900 /// XM_005259597 /// XM_005259598 /// XR_244034 /// XR_244035 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0051148 // negative regulation of muscle cell differentiation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008187 // poly-pyrimidine tract binding // traceable author statement /// 0036002 // pre-mRNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 125.22 </td> <td> 537.16 </td> <td> 3.82 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204478_s_at </td> <td> 204478_s_at </td> <td> NM_002871 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002871.1 /DEF=Homo sapiens RAB interacting factor (RABIF), mRNA. /FEA=mRNA /GEN=RABIF /PROD=RAB interacting factor /DB_XREF=gi:4506378 /UG=Hs.90875 RAB interacting factor /FL=gb:U74324.1 gb:NM_002871.1 </td> <td> NM_002871 </td> <td> RAB interacting factor </td> <td> RABIF </td> <td> 5877 </td> <td> NM_002871 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // non-traceable author statement /// 0043087 // regulation of GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // non-traceable author statement /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0061025 // membrane fusion // traceable author statement </td> <td>  </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 50.05 </td> <td> 106.88 </td> <td> 3.82 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 211148_s_at </td> <td> 211148_s_at </td> <td> AF187858 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF187858.1 /DEF=Homo sapiens angiopoietin-2 isoform-1 mRNA, complete cds, alternatively spliced.  /FEA=mRNA /PROD=angiopoietin-2 isoform-1 /DB_XREF=gi:8570646 /UG=Hs.115181 angiopoietin 2 /FL=gb:AF187858.1 </td> <td> AF187858 </td> <td> angiopoietin 2 </td> <td> ANGPT2 </td> <td> 285 </td> <td> NM_001118887 /// NM_001118888 /// NM_001147 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009314 // response to radiation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0010812 // negative regulation of cell-substrate adhesion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0048014 // Tie signaling pathway // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0050928 // negative regulation of positive chemotaxis // inferred from direct assay /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0072012 // glomerulus vasculature development // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 71.05 </td> <td> 122.55 </td> <td> 3.81 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 220395_at </td> <td> 220395_at </td> <td> NM_018602 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018602.1 /DEF=Homo sapiens hypothetical protein PRO1472 (PRO1472), mRNA. /FEA=mRNA /GEN=PRO1472 /PROD=hypothetical protein PRO1472 /DB_XREF=gi:8924043 /UG=Hs.154662 DnaJ (Hsp40) homolog, subfamily A, member 4 /FL=gb:AF116663.1 gb:NM_018602.1 </td> <td> NM_018602 </td> <td> DnaJ (Hsp40) homolog, subfamily A, member 4 </td> <td> DNAJA4 </td> <td> 55466 </td> <td> NM_001130182 /// NM_001130183 /// NM_018602 /// XM_005254535 /// XM_006720601 </td> <td> 0006457 // protein folding // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation /// 0042026 // protein refolding // inferred from direct assay /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay </td> <td> 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0005524 // ATP binding // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> -82.00 </td> <td> 178.65 </td> <td> -3.81 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 207657_x_at </td> <td> 207657_x_at </td> <td> NM_002270 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002270.1 /DEF=Homo sapiens karyopherin (importin) beta 2 (KPNB2), mRNA. /FEA=mRNA /GEN=KPNB2 /PROD=karyopherin (importin) beta 2 /DB_XREF=gi:4504906 /UG=Hs.168075 karyopherin (importin) beta 2 /FL=gb:U70322.1 gb:NM_002270.1 </td> <td> NM_002270 </td> <td> transportin 1 </td> <td> TNPO1 </td> <td> 3842 </td> <td> NM_002270 /// NM_153188 /// XM_005248500 /// XM_005248501 </td> <td> 0000060 // protein import into nucleus, translocation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -422.75 </td> <td> 1152.50 </td> <td> -3.81 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200936_at </td> <td> 200936_at </td> <td> NM_000973 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000973.1 /DEF=Homo sapiens ribosomal protein L8 (RPL8), mRNA. /FEA=mRNA /GEN=RPL8 /PROD=ribosomal protein L8 /DB_XREF=gi:4506662 /UG=Hs.178551 ribosomal protein L8 /FL=gb:BC000077.1 gb:NM_000973.1 </td> <td> NM_000973 </td> <td> ribosomal protein L8 </td> <td> RPL8 </td> <td> 6132 </td> <td> NM_000973 /// NM_033301 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015934 // large ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -251.70 </td> <td> 2009.03 </td> <td> -3.81 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221743_at </td> <td> 221743_at </td> <td> AI472139 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI472139 /FEA=EST /DB_XREF=gi:4334229 /DB_XREF=est:tj86a10.x1 /CLONE=IMAGE:2148378 /UG=Hs.9683 DnaJ (Hsp40) homolog, subfamily C, member 3 </td> <td> AI472139 </td> <td> CUGBP, Elav-like family member 1 </td> <td> CELF1 </td> <td> 10658 </td> <td> NM_001025596 /// NM_001172639 /// NM_001172640 /// NM_006560 /// NM_198700 /// XM_005252754 /// XM_005252755 /// XM_005252756 /// XM_006718122 /// XM_006718123 /// XM_006718124 /// XM_006718125 /// XM_006718126 /// XM_006718127 /// XM_006718128 /// XM_006718129 /// XM_006718130 /// XM_006718131 </td> <td> 0006376 // mRNA splice site selection // inferred from sequence or structural similarity /// 0006397 // mRNA processing // traceable author statement /// 0007281 // germ cell development // non-traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009790 // embryo development // non-traceable author statement /// 0016246 // RNA interference // non-traceable author statement /// 0017148 // negative regulation of translation // non-traceable author statement /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000900 // translation repressor activity, nucleic acid binding // non-traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0031369 // translation initiation factor binding // inferred from electronic annotation /// 0042835 // BRE binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 115.20 </td> <td> 311.85 </td> <td> 3.81 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218050_at </td> <td> 218050_at </td> <td> NM_016617 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016617.1 /DEF=Homo sapiens hypothetical protein (BM-002), mRNA. /FEA=mRNA /GEN=BM-002 /PROD=hypothetical protein /DB_XREF=gi:7705299 /UG=Hs.5862 hypothetical protein /FL=gb:BC005193.1 gb:AF208844.1 gb:NM_016617.1 </td> <td> NM_016617 </td> <td> ubiquitin-fold modifier 1 </td> <td> UFM1 </td> <td> 51569 </td> <td> NM_001286703 /// NM_001286704 /// NM_001286705 /// NM_001286706 /// NM_016617 /// NR_104584 /// NR_104585 </td> <td> 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0071569 // protein ufmylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> 50.12 </td> <td> 175.79 </td> <td> 3.81 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 207239_s_at </td> <td> 207239_s_at </td> <td> NM_006201 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006201.1 /DEF=Homo sapiens PCTAIRE protein kinase 1 (PCTK1), mRNA. /FEA=mRNA /GEN=PCTK1 /PROD=PCTAIRE protein kinase 1 /DB_XREF=gi:5453859 /UG=Hs.171834 PCTAIRE protein kinase 1 /FL=gb:NM_006201.1 </td> <td> NM_006201 </td> <td> cyclin-dependent kinase 16 </td> <td> CDK16 </td> <td> 5127 </td> <td> NM_001170460 /// NM_006201 /// NM_033018 /// XM_005272614 /// XM_005272615 /// XM_006724534 /// XM_006724535 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006887 // exocytosis // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030252 // growth hormone secretion // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0061178 // regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -36.17 </td> <td> 126.86 </td> <td> -3.81 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213136_at </td> <td> 213136_at </td> <td> AI828880 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI828880 /FEA=EST /DB_XREF=gi:5449551 /DB_XREF=est:wj37b02.x1 /CLONE=IMAGE:2404971 /UG=Hs.82829 protein tyrosine phosphatase, non-receptor type 2 </td> <td> AI828880 </td> <td> protein tyrosine phosphatase, non-receptor type 2 </td> <td> PTPN2 </td> <td> 5771 </td> <td> NM_001207013 /// NM_002828 /// NM_080422 /// NM_080423 /// XM_005258124 /// XM_005258125 /// XM_005258126 /// XM_005258127 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0010804 // negative regulation of tumor necrosis factor-mediated signaling pathway // inferred from sequence or structural similarity /// 0010888 // negative regulation of lipid storage // inferred from sequence or structural similarity /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030183 // B cell differentiation // inferred from sequence or structural similarity /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from mutant phenotype /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // inferred from mutant phenotype /// 0042512 // negative regulation of tyrosine phosphorylation of Stat1 protein // inferred from direct assay /// 0042512 // negative regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042518 // negative regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from sequence or structural similarity /// 0042527 // negative regulation of tyrosine phosphorylation of Stat6 protein // inferred from electronic annotation /// 0042527 // negative regulation of tyrosine phosphorylation of Stat6 protein // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0045650 // negative regulation of macrophage differentiation // inferred from sequence or structural similarity /// 0045722 // positive regulation of gluconeogenesis // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0050728 // negative regulation of inflammatory response // inferred from sequence or structural similarity /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050922 // negative regulation of chemotaxis // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement /// 0060336 // negative regulation of interferon-gamma-mediated signaling pathway // inferred from sequence or structural similarity /// 0060339 // negative regulation of type I interferon-mediated signaling pathway // inferred from mutant phenotype /// 0070104 // negative regulation of interleukin-6-mediated signaling pathway // inferred from electronic annotation /// 0070104 // negative regulation of interleukin-6-mediated signaling pathway // inferred from mutant phenotype /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 1902202 // regulation of hepatocyte growth factor receptor signaling pathway // inferred from mutant phenotype /// 1902206 // negative regulation of interleukin-2-mediated signaling pathway // inferred from mutant phenotype /// 1902212 // negative regulation of prolactin signaling pathway // inferred from sequence or structural similarity /// 1902215 // negative regulation of interleukin-4-mediated signaling pathway // inferred from electronic annotation /// 1902215 // negative regulation of interleukin-4-mediated signaling pathway // inferred from mutant phenotype /// 1902227 // negative regulation of macrophage colony-stimulating factor signaling pathway // inferred from sequence or structural similarity /// 1902233 // negative regulation of positive thymic T cell selection // inferred from sequence or structural similarity /// 2000587 // negative regulation of platelet-derived growth factor receptor-beta signaling pathway // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from mutant phenotype /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019905 // syntaxin binding // inferred from physical interaction /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction </td> <td> -47.38 </td> <td> 93.86 </td> <td> -3.81 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 219363_s_at </td> <td> 219363_s_at </td> <td> NM_015942 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015942.1 /DEF=Homo sapiens CGI-12 protein (LOC51001), mRNA. /FEA=mRNA /GEN=LOC51001 /PROD=CGI-12 protein /DB_XREF=gi:7705587 /UG=Hs.46680 CGI-12 protein /FL=gb:AF132946.1 gb:NM_015942.1 </td> <td> NM_015942 </td> <td> mitochondrial transcription termination factor 3 </td> <td> MTERF3 </td> <td> 51001 </td> <td> NM_001286643 /// NM_015942 /// XM_005250926 /// XM_005250927 /// XM_006716568 /// XM_006716569 /// XM_006716570 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay </td> <td> 35.92 </td> <td> 80.11 </td> <td> 3.81 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208854_s_at </td> <td> 208854_s_at </td> <td> AA586774 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA586774 /FEA=EST /DB_XREF=gi:2397588 /DB_XREF=est:nn75a04.s1 /CLONE=IMAGE:1089678 /UG=Hs.168913 serinethreonine kinase 24 (Ste20, yeast homolog) /FL=gb:AF083420.1 </td> <td> AA586774 </td> <td> serine/threonine kinase 24 </td> <td> STK24 </td> <td> 8428 </td> <td> NM_001032296 /// NM_001286649 /// NM_003576 /// XM_005254078 /// XM_005254079 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008631 // intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // not recorded /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048679 // regulation of axon regeneration // inferred from mutant phenotype /// 0097194 // execution phase of apoptosis // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -78.50 </td> <td> 275.38 </td> <td> -3.81 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 211710_x_at </td> <td> 211710_x_at </td> <td> BC005817 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005817.1 /DEF=Homo sapiens, ribosomal protein L4, clone MGC:11073, mRNA, complete cds.  /FEA=mRNA /PROD=ribosomal protein L4 /DB_XREF=gi:13543303 /FL=gb:BC005817.1 </td> <td> BC005817 </td> <td> ribosomal protein L4 /// small nucleolar RNA, C/D box 16 /// small nucleolar RNA, C/D box 18A /// small nucleolar RNA, C/D box 18B /// small nucleolar RNA, C/D box 18C </td> <td> RPL4 /// SNORD16 /// SNORD18A /// SNORD18B /// SNORD18C </td> <td> 6124 /// 595097 /// 595098 /// 595099 /// 595100 </td> <td> NM_000968 /// NR_002440 /// NR_002441 /// NR_002442 /// NR_002443 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -780.47 </td> <td> 2680.36 </td> <td> -3.81 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201238_s_at </td> <td> 201238_s_at </td> <td> BC005338 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005338.1 /DEF=Homo sapiens, capping protein (actin filament) muscle Z-line, alpha 2, clone MGC:12426, mRNA, complete cds.  /FEA=mRNA /PROD=capping protein (actin filament) muscle Z-line,alpha 2 /DB_XREF=gi:13529130 /UG=Hs.75546 capping protein (actin filament) muscle Z-line, alpha 2 /FL=gb:BC005338.1 gb:NM_006136.1 gb:U03269.1 </td> <td> BC005338 </td> <td> capping protein (actin filament) muscle Z-line, alpha 2 </td> <td> CAPZA2 </td> <td> 830 </td> <td> NM_006136 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008290 // F-actin capping protein complex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071203 // WASH complex // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 101.53 </td> <td> 659.61 </td> <td> 3.81 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 206061_s_at </td> <td> 206061_s_at </td> <td> NM_030621 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030621.1 /DEF=Homo sapiens helicase-moi (KIAA0928), mRNA. /FEA=mRNA /GEN=KIAA0928 /PROD=helicase-moi /DB_XREF=gi:13449288 /UG=Hs.87889 helicase-moi /FL=gb:NM_030621.1 gb:AB028449.1 </td> <td> NM_030621 </td> <td> dicer 1, ribonuclease type III </td> <td> DICER1 </td> <td> 23405 </td> <td> NM_001195573 /// NM_001271282 /// NM_001291628 /// NM_030621 /// NM_177438 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010070 // zygote asymmetric cell division // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010626 // negative regulation of Schwann cell proliferation // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0014040 // positive regulation of Schwann cell differentiation // inferred from sequence or structural similarity /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021675 // nerve development // inferred from sequence or structural similarity /// 0021889 // olfactory bulb interneuron differentiation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030422 // production of siRNA involved in RNA interference // inferred from direct assay /// 0030423 // targeting of mRNA for destruction involved in RNA interference // inferred from mutant phenotype /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031054 // pre-miRNA processing // inferred from direct assay /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031641 // regulation of myelination // inferred from electronic annotation /// 0031643 // positive regulation of myelination // inferred from sequence or structural similarity /// 0032290 // peripheral nervous system myelin formation // inferred from sequence or structural similarity /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from sequence or structural similarity /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042487 // regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045069 // regulation of viral genome replication // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048713 // regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0055013 // cardiac muscle cell development // inferred from electronic annotation /// 0060119 // inner ear receptor cell development // inferred from electronic annotation /// 0060576 // intestinal epithelial cell development // inferred from electronic annotation /// 0070173 // regulation of enamel mineralization // inferred from electronic annotation /// 0071335 // hair follicle cell proliferation // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090501 // RNA phosphodiester bond hydrolysis // inferred from direct assay /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from direct assay /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation /// 2000630 // positive regulation of miRNA metabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016442 // RISC complex // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004525 // ribonuclease III activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016891 // endoribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0035198 // miRNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 68.42 </td> <td> 65.31 </td> <td> 3.80 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221881_s_at </td> <td> 221881_s_at </td> <td> AI638420 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI638420 /FEA=EST /DB_XREF=gi:4690654 /DB_XREF=est:tt31g07.x1 /CLONE=IMAGE:2242428 /UG=Hs.25035 chloride intracellular channel 4 </td> <td> AI638420 </td> <td> chloride intracellular channel 4 </td> <td> CLIC4 </td> <td> 25932 </td> <td> NM_013943 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001886 // endothelial cell morphogenesis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // non-traceable author statement /// 0007035 // vacuolar acidification // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030216 // keratinocyte differentiation // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // non-traceable author statement /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // non-traceable author statement /// 0061299 // retina vasculature morphogenesis in camera-type eye // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from mutant phenotype /// 1902476 // chloride transmembrane transport // inferred from electronic annotation /// 1902476 // chloride transmembrane transport // traceable author statement </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005902 // microvillus // inferred from direct assay /// 0005911 // cell-cell junction // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0015629 // actin cytoskeleton // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -122.50 </td> <td> 273.85 </td> <td> -3.80 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212414_s_at </td> <td> 212414_s_at </td> <td> D50918 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D50918.1 /DEF=Human mRNA for KIAA0128 gene, partial cds. /FEA=mRNA /GEN=KIAA0128 /DB_XREF=gi:1469178 /UG=Hs.90998 KIAA0128 protein; septin 2 </td> <td> D50918 </td> <td> glyoxylate reductase 1 homolog (Arabidopsis) /// septin 6 </td> <td> GLYR1 /// SEPT6 </td> <td> 23157 /// 84656 </td> <td> NM_015129 /// NM_032569 /// NM_145799 /// NM_145800 /// NM_145802 /// XM_005255637 /// XM_005255638 /// XM_005255639 /// XM_005255640 /// XM_005262400 /// XM_006724748 /// XM_006724749 /// XM_006724750 /// XR_243321 </td> <td> 0000910 // cytokinesis // traceable author statement /// 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004616 // phosphogluconate dehydrogenase (decarboxylating) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0035064 // methylated histone binding // inferred from direct assay /// 0050662 // coenzyme binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 55.37 </td> <td> 139.36 </td> <td> 3.80 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 210517_s_at </td> <td> 210517_s_at </td> <td> AB003476 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB003476.1 /DEF=Homo sapiens mRNA for gravin, complete cds. /FEA=mRNA /PROD=gravin /DB_XREF=gi:2081606 /UG=Hs.788 A kinase (PRKA) anchor protein (gravin) 12 /FL=gb:AB003476.1 </td> <td> AB003476 </td> <td> A kinase (PRKA) anchor protein 12 </td> <td> AKAP12 </td> <td> 9590 </td> <td> NM_005100 /// NM_144497 /// XM_005267233 /// XM_005267234 /// XM_005267235 </td> <td> 0006605 // protein targeting // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0010739 // positive regulation of protein kinase A signaling // inferred from mutant phenotype /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from mutant phenotype /// 0090036 // regulation of protein kinase C signaling // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008179 // adenylate cyclase binding // inferred from physical interaction /// 0051018 // protein kinase A binding // inferred from electronic annotation </td> <td> -414.70 </td> <td> 2180.45 </td> <td> -3.80 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209049_s_at </td> <td> 209049_s_at </td> <td> BC001004 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001004.1 /DEF=Homo sapiens, clone MGC:5439, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:5439) /DB_XREF=gi:12654362 /UG=Hs.75871 protein kinase C binding protein 1 /FL=gb:BC001004.1 </td> <td> BC001004 </td> <td> zinc finger, MYND-type containing 8 </td> <td> ZMYND8 </td> <td> 23613 </td> <td> NM_001281769 /// NM_001281771 /// NM_001281772 /// NM_001281773 /// NM_001281774 /// NM_001281775 /// NM_001281776 /// NM_001281777 /// NM_001281778 /// NM_001281779 /// NM_001281780 /// NM_001281781 /// NM_001281782 /// NM_001281783 /// NM_001281784 /// NM_012408 /// NM_183047 /// NM_183048 /// XM_005260356 /// XM_005260358 /// XM_005260360 /// XM_005260361 /// XM_005260362 /// XM_005260364 /// XM_005260365 /// XM_005260366 /// XM_005260369 /// XM_005260371 /// XM_005260377 /// XM_006723760 /// XM_006723761 /// XM_006723762 /// XM_006723763 /// XM_006723764 /// XM_006723765 /// XM_006723766 /// XM_006723767 /// XM_006723768 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity </td> <td> 0001106 // RNA polymerase II transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from sequence or structural similarity </td> <td> -233.73 </td> <td> 543.66 </td> <td> -3.80 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201684_s_at </td> <td> 201684_s_at </td> <td> BF001668 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF001668 /FEA=EST /DB_XREF=gi:10701943 /DB_XREF=est:7g91e03.x1 /CLONE=IMAGE:3313852 /UG=Hs.194035 KIAA0737 gene product /FL=gb:AB018280.1 gb:NM_014828.1 </td> <td> BF001668 </td> <td> TOX high mobility group box family member 4 </td> <td> TOX4 </td> <td> 9878 </td> <td> NM_014828 </td> <td>  </td> <td> 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 58.90 </td> <td> 171.25 </td> <td> 3.80 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208808_s_at </td> <td> 208808_s_at </td> <td> BC000903 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000903.1 /DEF=Homo sapiens, high-mobility group (nonhistone chromosomal) protein 2, clone MGC:5234, mRNA, complete cds.  /FEA=mRNA /PROD=high-mobility group (nonhistone chromosomal)protein 2 /DB_XREF=gi:12654170 /UG=Hs.80684 high-mobility group (nonhistone chromosomal) protein 2 /FL=gb:BC000903.1 gb:BC001063.1 </td> <td> BC000903 </td> <td> high mobility group box 2 </td> <td> HMGB2 </td> <td> 3148 </td> <td> NM_001130688 /// NM_001130689 /// NM_002129 </td> <td> 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0006265 // DNA topological change // inferred from sequence or structural similarity /// 0006288 // base-excision repair, DNA ligation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007289 // spermatid nucleus differentiation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0032075 // positive regulation of nuclease activity // inferred from direct assay /// 0033151 // V(D)J recombination // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0045648 // positive regulation of erythrocyte differentiation // inferred from mutant phenotype /// 0045654 // positive regulation of megakaryocyte differentiation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0050918 // positive chemotaxis // inferred from direct assay /// 0051103 // DNA ligation involved in DNA repair // inferred from sequence or structural similarity /// 0060326 // cell chemotaxis // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from expression pattern /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from electronic annotation </td> <td> 0000793 // condensed chromosome // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from mutant phenotype /// 0003684 // damaged DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008301 // DNA binding, bending // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042056 // chemoattractant activity // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050786 // RAGE receptor binding // inferred from genetic interaction </td> <td> -161.07 </td> <td> 624.26 </td> <td> -3.80 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201211_s_at </td> <td> 201211_s_at </td> <td> AF061337 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF061337.1 /DEF=Homo sapiens DEAD box RNA helicase DDX3 (DDX3) mRNA, complete cds. /FEA=mRNA /GEN=DDX3 /PROD=DEAD box RNA helicase DDX3 /DB_XREF=gi:3523149 /UG=Hs.147916 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 3 /FL=gb:NM_001356.2 gb:U50553.1 gb:AF000982.1 gb:AF061337.1 </td> <td> AF061337 </td> <td> DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked </td> <td> DDX3X </td> <td> 1654 </td> <td> NM_001193416 /// NM_001193417 /// NM_001356 /// NM_024005 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 0009615 // response to virus // inferred from direct assay /// 0010501 // RNA secondary structure unwinding // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0031333 // negative regulation of protein complex assembly // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // traceable author statement /// 0034063 // stress granule assembly // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042256 // mature ribosome assembly // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045948 // positive regulation of translational initiation // inferred from mutant phenotype /// 0071243 // cellular response to arsenic-containing substance // inferred from direct assay /// 0071470 // cellular response to osmotic stress // inferred from direct assay /// 0071651 // positive regulation of chemokine (C-C motif) ligand 5 production // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 1900087 // positive regulation of G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from direct assay /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004004 // ATP-dependent RNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0008143 // poly(A) binding // inferred from direct assay /// 0008190 // eukaryotic initiation factor 4E binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0031369 // translation initiation factor binding // inferred from direct assay /// 0035613 // RNA stem-loop binding // inferred from direct assay /// 0043024 // ribosomal small subunit binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048027 // mRNA 5'-UTR binding // inferred from direct assay </td> <td> -62.65 </td> <td> 175.65 </td> <td> -3.80 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 205067_at </td> <td> 205067_at </td> <td> NM_000576 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000576.1 /DEF=Homo sapiens interleukin 1, beta (IL1B), mRNA. /FEA=mRNA /GEN=IL1B /PROD=interleukin 1, beta /DB_XREF=gi:10835144 /UG=Hs.126256 interleukin 1, beta /FL=gb:NM_000576.1 gb:K02770.1 gb:M15330.1 gb:M54933.1 </td> <td> NM_000576 </td> <td> interleukin 1, beta </td> <td> IL1B </td> <td> 3553 </td> <td> NM_000576 /// XM_006712496 </td> <td> 0000165 // MAPK cascade // inferred from mutant phenotype /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0001660 // fever generation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // non-traceable author statement /// 0002711 // positive regulation of T cell mediated immunity // inferred by curator /// 0006915 // apoptotic process // traceable author statement /// 0006954 // inflammatory response // inferred from direct assay /// 0006954 // inflammatory response // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007566 // embryo implantation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009743 // response to carbohydrate // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010829 // negative regulation of glucose transport // inferred from sequence or structural similarity /// 0014805 // smooth muscle adaptation // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0030213 // hyaluronan biosynthetic process // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0030730 // sequestering of triglyceride // inferred from direct assay /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred by curator /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0032308 // positive regulation of prostaglandin secretion // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032611 // interleukin-1 beta production // inferred from electronic annotation /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // traceable author statement /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0033129 // positive regulation of histone phosphorylation // non-traceable author statement /// 0033198 // response to ATP // inferred from electronic annotation /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from direct assay /// 0034116 // positive regulation of heterotypic cell-cell adhesion // non-traceable author statement /// 0035066 // positive regulation of histone acetylation // non-traceable author statement /// 0035234 // ectopic germ cell programmed cell death // inferred from electronic annotation /// 0035505 // positive regulation of myosin light chain kinase activity // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042221 // response to chemical // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0043122 // regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043491 // protein kinase B signaling // inferred from mutant phenotype /// 0045080 // positive regulation of chemokine biosynthetic process // inferred from electronic annotation /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from mutant phenotype /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045833 // negative regulation of lipid metabolic process // inferred from sequence or structural similarity /// 0045840 // positive regulation of mitosis // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046827 // positive regulation of protein export from nucleus // non-traceable author statement /// 0050796 // regulation of insulin secretion // inferred from direct assay /// 0050900 // leukocyte migration // inferred from electronic annotation /// 0050995 // negative regulation of lipid catabolic process // inferred from direct assay /// 0050996 // positive regulation of lipid catabolic process // inferred from sequence or structural similarity /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060355 // positive regulation of cell adhesion molecule production // non-traceable author statement /// 0060559 // positive regulation of calcidiol 1-monooxygenase activity // inferred from direct assay /// 0070164 // negative regulation of adiponectin secretion // inferred from sequence or structural similarity /// 0070487 // monocyte aggregation // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071310 // cellular response to organic substance // inferred from direct assay /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay /// 0071639 // positive regulation of monocyte chemotactic protein-1 production // inferred from direct assay /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from mutant phenotype /// 0005829 // cytosol // traceable author statement /// 0030141 // secretory granule // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation </td> <td> 0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from mutant phenotype /// 0005149 // interleukin-1 receptor binding // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from physical interaction </td> <td> -39.85 </td> <td> 61.40 </td> <td> -3.80 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212033_at </td> <td> 212033_at </td> <td> BF055107 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF055107 /FEA=EST /DB_XREF=gi:10809003 /DB_XREF=est:7j75a05.x1 /CLONE=IMAGE:3392240 /UG=Hs.180789 S164 protein </td> <td> BF055107 </td> <td> RNA binding motif protein 25 </td> <td> RBM25 </td> <td> 58517 </td> <td> NM_021239 </td> <td> 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0097194 // execution phase of apoptosis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 73.30 </td> <td> 215.38 </td> <td> 3.80 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213881_x_at </td> <td> 213881_x_at </td> <td> AI971724 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI971724 /FEA=EST /DB_XREF=gi:5768550 /DB_XREF=est:wr07a04.x1 /CLONE=IMAGE:2480814 /UG=Hs.180139 SMT3 (suppressor of mif two 3, yeast) homolog 2 </td> <td> AI971724 </td> <td> small ubiquitin-related modifier 2-like /// small ubiquitin-like modifier 2 /// small ubiquitin-like modifier 3 </td> <td> LOC101929087 /// SUMO2 /// SUMO3 </td> <td> 6612 /// 6613 /// 101929087 </td> <td> NM_001005849 /// NM_001286416 /// NM_006936 /// NM_006937 /// XM_005250081 /// XM_005276013 /// XM_005276311 </td> <td> 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // traceable author statement /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000776 // kinetochore // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 187.10 </td> <td> 1422.50 </td> <td> 3.80 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212127_at </td> <td> 212127_at </td> <td> BE379408 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE379408 /FEA=EST /DB_XREF=gi:9324773 /DB_XREF=est:601237213F1 /CLONE=IMAGE:3609315 /UG=Hs.183800 Ran GTPase activating protein 1 /FL=gb:NM_002883.1 </td> <td> BE379408 </td> <td> Ran GTPase activating protein 1 </td> <td> RANGAP1 </td> <td> 5905 </td> <td> NM_001278651 /// NM_002883 /// XM_005261695 /// XM_005261696 /// XM_006724289 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0032853 // positive regulation of Ran GTPase activity // inferred from electronic annotation /// 0032853 // positive regulation of Ran GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046826 // negative regulation of protein export from nucleus // inferred from direct assay </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005098 // Ran GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -59.10 </td> <td> 177.32 </td> <td> -3.80 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200081_s_at </td> <td> 200081_s_at </td> <td> BE741754 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE741754 /FEA=EST /DB_XREF=gi:10155746 /DB_XREF=est:601595220F1 /CLONE=IMAGE:3949109 /UG=Hs.241507 ribosomal protein S6 </td> <td> BE741754 </td> <td> ribosomal protein S6 </td> <td> RPS6 </td> <td> 6194 </td> <td> NM_001010 </td> <td> 0000028 // ribosomal small subunit assembly // inferred from electronic annotation /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0031929 // TOR signaling // inferred from direct assay /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030425 // dendrite // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0044297 // cell body // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -633.40 </td> <td> 3072.05 </td> <td> -3.79 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203743_s_at </td> <td> 203743_s_at </td> <td> NM_003211 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003211.1 /DEF=Homo sapiens thymine-DNA glycosylase (TDG), mRNA. /FEA=mRNA /GEN=TDG /PROD=thymine-DNA glycosylase /DB_XREF=gi:4507422 /UG=Hs.173824 thymine-DNA glycosylase /FL=gb:U51166.1 gb:NM_003211.1 </td> <td> NM_003211 </td> <td> thymine-DNA glycosylase </td> <td> TDG </td> <td> 6996 </td> <td> NM_001008411 /// NM_003211 /// XM_005269125 /// XR_429113 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006284 // base-excision repair // inferred from direct assay /// 0006284 // base-excision repair // traceable author statement /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006298 // mismatch repair // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from electronic annotation /// 0035562 // negative regulation of chromatin binding // inferred from electronic annotation /// 0040029 // regulation of gene expression, epigenetic // inferred from sequence or structural similarity /// 0045008 // depyrimidination // traceable author statement /// 0080111 // DNA demethylation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation </td> <td> 0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008263 // pyrimidine-specific mismatch base pair DNA N-glycosylase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0016799 // hydrolase activity, hydrolyzing N-glycosyl compounds // inferred from electronic annotation /// 0019104 // DNA N-glycosylase activity // inferred from direct assay /// 0030983 // mismatched DNA binding // inferred from direct assay /// 0032183 // SUMO binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043566 // structure-specific DNA binding // inferred from sequence or structural similarity </td> <td> 57.43 </td> <td> 162.29 </td> <td> 3.79 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212097_at </td> <td> 212097_at </td> <td> AU147399 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU147399 /FEA=EST /DB_XREF=gi:11008920 /DB_XREF=est:AU147399 /CLONE=MAMMA1000563 /UG=Hs.74034 Homo sapiens clone 24651 mRNA sequence </td> <td> AU147399 </td> <td> caveolin 1, caveolae protein, 22kDa </td> <td> CAV1 </td> <td> 857 </td> <td> NM_001172895 /// NM_001172896 /// NM_001172897 /// NM_001753 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000188 // inactivation of MAPK activity // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001937 // negative regulation of endothelial cell proliferation // inferred from sequence or structural similarity /// 0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002931 // response to ischemia // inferred from electronic annotation /// 0003057 // regulation of the force of heart contraction by chemical signal // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from sequence or structural similarity /// 0006816 // calcium ion transport // inferred from sequence or structural similarity /// 0006874 // cellular calcium ion homeostasis // inferred from sequence or structural similarity /// 0006940 // regulation of smooth muscle contraction // inferred from sequence or structural similarity /// 0007519 // skeletal muscle tissue development // inferred from sequence or structural similarity /// 0007595 // lactation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from expression pattern /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from sequence or structural similarity /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016050 // vesicle organization // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019217 // regulation of fatty acid metabolic process // inferred from sequence or structural similarity /// 0019915 // lipid storage // inferred from sequence or structural similarity /// 0030193 // regulation of blood coagulation // inferred from mutant phenotype /// 0030301 // cholesterol transport // traceable author statement /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0030857 // negative regulation of epithelial cell differentiation // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0031295 // T cell costimulation // inferred from direct assay /// 0031397 // negative regulation of protein ubiquitination // inferred from mutant phenotype /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032507 // maintenance of protein location in cell // inferred from sequence or structural similarity /// 0032570 // response to progesterone // inferred from direct assay /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033484 // nitric oxide homeostasis // inferred from sequence or structural similarity /// 0042310 // vasoconstriction // inferred from electronic annotation /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from sequence or structural similarity /// 0042632 // cholesterol homeostasis // traceable author statement /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043627 // response to estrogen // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045019 // negative regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045907 // positive regulation of vasoconstriction // inferred from sequence or structural similarity /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0046426 // negative regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0048550 // negative regulation of pinocytosis // inferred from mutant phenotype /// 0048554 // positive regulation of metalloenzyme activity // inferred from sequence or structural similarity /// 0050900 // leukocyte migration // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051001 // negative regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from sequence or structural similarity /// 0051480 // cytosolic calcium ion homeostasis // inferred from direct assay /// 0051592 // response to calcium ion // inferred from sequence or structural similarity /// 0051899 // membrane depolarization // inferred from sequence or structural similarity /// 0052547 // regulation of peptidase activity // inferred from sequence or structural similarity /// 0055074 // calcium ion homeostasis // inferred from sequence or structural similarity /// 0060056 // mammary gland involution // inferred from sequence or structural similarity /// 0070836 // caveola assembly // inferred from mutant phenotype /// 0071455 // cellular response to hyperoxia // inferred from mutant phenotype /// 0072584 // caveolin-mediated endocytosis // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 0097190 // apoptotic signaling pathway // inferred from mutant phenotype /// 2000286 // receptor internalization involved in canonical Wnt signaling pathway // inferred from mutant phenotype /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from direct assay /// 0000139 // Golgi membrane // traceable author statement /// 0002080 // acrosomal membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005811 // lipid particle // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0005901 // caveola // non-traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0005102 // receptor binding // inferred from physical interaction /// 0005113 // patched binding // non-traceable author statement /// 0005198 // structural molecule activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0015485 // cholesterol binding // traceable author statement /// 0016504 // peptidase activator activity // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from physical interaction /// 0032947 // protein complex scaffold // traceable author statement /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction </td> <td> -560.07 </td> <td> 3105.34 </td> <td> -3.79 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 206857_s_at </td> <td> 206857_s_at </td> <td> NM_004116 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004116.1 /DEF=Homo sapiens FK506-binding protein 1B (12.6 kD) (FKBP1B), mRNA. /FEA=mRNA /GEN=FKBP1B /PROD=FK506-binding protein 1B (12.6 kD) /DB_XREF=gi:4758379 /UG=Hs.77643 FK506-binding protein 1B (12.6 kD) /FL=gb:NM_004116.1 gb:D38037.1 gb:L37086.1 </td> <td> NM_004116 </td> <td> FK506 binding protein 1B, 12.6 kDa </td> <td> FKBP1B </td> <td> 2281 </td> <td> NM_004116 /// NM_054033 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0002027 // regulation of heart rate // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006458 // 'de novo' protein folding // traceable author statement /// 0006936 // muscle contraction // non-traceable author statement /// 0006939 // smooth muscle contraction // inferred from electronic annotation /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010459 // negative regulation of heart rate // inferred from sequence or structural similarity /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // inferred from direct assay /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // not recorded /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred from sequence or structural similarity /// 0014808 // release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // inferred from electronic annotation /// 0018208 // peptidyl-proline modification //  /// 0019227 // neuronal action potential propagation // inferred from electronic annotation /// 0022417 // protein maturation by protein folding // traceable author statement /// 0030073 // insulin secretion // inferred from electronic annotation /// 0032513 // negative regulation of protein phosphatase type 2B activity // inferred from direct assay /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0035584 // calcium-mediated signaling using intracellular calcium source // traceable author statement /// 0042026 // protein refolding // traceable author statement /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0048680 // positive regulation of axon regeneration // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051280 // negative regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051284 // positive regulation of sequestering of calcium ion // inferred from direct assay /// 0051480 // cytosolic calcium ion homeostasis // inferred from direct assay /// 0051480 // cytosolic calcium ion homeostasis // inferred from genetic interaction /// 0051775 // response to redox state // inferred from direct assay /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from mutant phenotype /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0061077 // chaperone-mediated protein folding // not recorded /// 0061179 // negative regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement /// 0086064 // cell communication by electrical coupling involved in cardiac conduction // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred by curator /// 0016020 // membrane // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0033017 // sarcoplasmic reticulum membrane // not recorded /// 0034704 // calcium channel complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005219 // ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005528 // FK506 binding // inferred from direct assay /// 0016853 // isomerase activity // inferred from electronic annotation /// 0019855 // calcium channel inhibitor activity // inferred from direct assay /// 0030551 // cyclic nucleotide binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from sequence or structural similarity </td> <td> 46.20 </td> <td> 105.05 </td> <td> 3.79 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 219437_s_at </td> <td> 219437_s_at </td> <td> NM_013275 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013275.1 /DEF=Homo sapiens nasopharyngeal carcinoma susceptibility protein (LZ16), mRNA.  /FEA=mRNA /GEN=LZ16 /PROD=nasopharyngeal carcinoma susceptibility protein /DB_XREF=gi:7019448 /UG=Hs.42390 nasopharyngeal carcinoma susceptibility protein /FL=gb:AF121775.1 gb:NM_013275.1 </td> <td> NM_013275 </td> <td> ankyrin repeat domain 11 </td> <td> ANKRD11 </td> <td> 29123 </td> <td> NM_001256182 /// NM_001256183 /// NM_013275 /// NR_045839 /// XM_006721181 /// XM_006721182 /// XM_006721183 /// XM_006721184 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from mutant phenotype /// 0048705 // skeletal system morphogenesis // inferred from mutant phenotype /// 0060323 // head morphogenesis // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from mutant phenotype /// 0060348 // bone development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -41.50 </td> <td> 96.10 </td> <td> -3.78 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202649_x_at </td> <td> 202649_x_at </td> <td> NM_001022 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001022.1 /DEF=Homo sapiens ribosomal protein S19 (RPS19), mRNA. /FEA=mRNA /GEN=RPS19 /PROD=ribosomal protein S19 /DB_XREF=gi:4506694 /UG=Hs.298262 ribosomal protein S19 /FL=gb:BC000023.1 gb:M81757.1 gb:NM_001022.1 </td> <td> NM_001022 </td> <td> ribosomal protein S19 </td> <td> RPS19 </td> <td> 6223 </td> <td> NM_001022 </td> <td> 0000028 // ribosomal small subunit assembly // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000462 // maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from mutant phenotype /// 0002548 // monocyte chemotaxis // inferred from direct assay /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007000 // nucleolus organization // inferred from mutant phenotype /// 0009991 // response to extracellular stimulus // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0030218 // erythrocyte differentiation // inferred from mutant phenotype /// 0030490 // maturation of SSU-rRNA // inferred from mutant phenotype /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051262 // protein tetramerization // inferred from direct assay /// 0051272 // positive regulation of cellular component movement // traceable author statement /// 0060265 // positive regulation of respiratory burst involved in inflammatory response // inferred from direct assay /// 0060266 // negative regulation of respiratory burst involved in inflammatory response // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -969.93 </td> <td> 3620.86 </td> <td> -3.78 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202907_s_at </td> <td> 202907_s_at </td> <td> NM_002485 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002485.2 /DEF=Homo sapiens Nijmegen breakage syndrome 1 (nibrin) (NBS1), mRNA. /FEA=mRNA /GEN=NBS1 /PROD=nibrin /DB_XREF=gi:6996019 /UG=Hs.25812 Nijmegen breakage syndrome 1 (nibrin) /FL=gb:AF058696.1 gb:AF051334.1 gb:NM_002485.2 </td> <td> NM_002485 </td> <td> nibrin </td> <td> NBN </td> <td> 4683 </td> <td> NM_001024688 /// NM_002485 /// XM_005250923 /// XR_242390 /// XR_242391 </td> <td> 0000075 // cell cycle checkpoint // inferred from electronic annotation /// 0000077 // DNA damage checkpoint // inferred from direct assay /// 0000723 // telomere maintenance // inferred from mutant phenotype /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001832 // blastocyst growth // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006302 // double-strand break repair // inferred from direct assay /// 0006302 // double-strand break repair // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007093 // mitotic cell cycle checkpoint // inferred from direct assay /// 0007095 // mitotic G2 DNA damage checkpoint // inferred from direct assay /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0030174 // regulation of DNA-dependent DNA replication initiation // traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // traceable author statement /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from mutant phenotype /// 0033674 // positive regulation of kinase activity // inferred from direct assay /// 0045190 // isotype switching // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0097193 // intrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0000784 // nuclear chromosome, telomeric region // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0030870 // Mre11 complex // inferred from direct assay /// 0035861 // site of double-strand break // inferred from direct assay /// 0042405 // nuclear inclusion body // inferred from direct assay </td> <td> 0003684 // damaged DNA binding // inferred by curator /// 0004003 // ATP-dependent DNA helicase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -41.13 </td> <td> 263.54 </td> <td> -3.78 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212442_s_at </td> <td> 212442_s_at </td> <td> BG289001 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG289001 /FEA=EST /DB_XREF=gi:13044404 /DB_XREF=est:602381262F1 /CLONE=IMAGE:4499078 /UG=Hs.101282 Homo sapiens cDNA: FLJ21238 fis, clone COL01115 </td> <td> BG289001 </td> <td> ceramide synthase 6 </td> <td> CERS6 </td> <td> 253782 </td> <td> NM_001256126 /// NM_203463 /// XM_005246440 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from electronic annotation </td> <td> 41.60 </td> <td> 78.00 </td> <td> 3.78 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218057_x_at </td> <td> 218057_x_at </td> <td> NM_006067 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006067.1 /DEF=Homo sapiens neighbor of COX4 (NOC4), mRNA. /FEA=mRNA /GEN=NOC4 /PROD=neighbor of COX4 /DB_XREF=gi:5174614 /UG=Hs.173162 neighbor of COX4 /FL=gb:BC001472.1 gb:AF005888.1 gb:NM_006067.1 </td> <td> NM_006067 </td> <td> ER membrane protein complex subunit 8 </td> <td> EMC8 </td> <td> 10328 </td> <td> NM_001142288 /// NM_006067 </td> <td>  </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0072546 // ER membrane protein complex // inferred from direct assay </td> <td>  </td> <td> 54.50 </td> <td> 196.00 </td> <td> 3.78 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213587_s_at </td> <td> 213587_s_at </td> <td> AI884867 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI884867 /FEA=EST /DB_XREF=gi:5590031 /DB_XREF=est:wl85g03.x1 /CLONE=IMAGE:2431732 /UG=Hs.91379 ribosomal protein L26 </td> <td> AI884867 </td> <td> ATPase, H+ transporting V0 subunit e2 </td> <td> ATP6V0E2 </td> <td> 155066 </td> <td> NM_001100592 /// NM_001289990 /// NM_145230 /// NR_110612 /// XM_005249958 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016049 // cell growth // inferred from genetic interaction /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0033572 // transferrin transport // traceable author statement /// 0042273 // ribosomal large subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0015934 // large ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // non-traceable author statement /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042625 // ATPase activity, coupled to transmembrane movement of ions // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 49.75 </td> <td> 105.73 </td> <td> 3.78 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202856_s_at </td> <td> 202856_s_at </td> <td> NM_004207 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004207.1 /DEF=Homo sapiens solute carrier family 16 (monocarboxylic acid transporters), member 3 (SLC16A3), mRNA.  /FEA=mRNA /GEN=SLC16A3 /PROD=solute carrier family 16 (monocarboxylic acidtransporters), member 3 /DB_XREF=gi:4759111 /UG=Hs.85838 solute carrier family 16 (monocarboxylic acid transporters), member 3 /FL=gb:U81800.1 gb:NM_004207.1 </td> <td> NM_004207 </td> <td> microRNA 6787 /// solute carrier family 16 (monocarboxylate transporter), member 3 </td> <td> MIR6787 /// SLC16A3 </td> <td> 9123 /// 102465472 </td> <td> NM_001042422 /// NM_001042423 /// NM_001206950 /// NM_001206951 /// NM_001206952 /// NM_004207 /// NR_106845 </td> <td> 0006090 // pyruvate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -222.60 </td> <td> 336.15 </td> <td> -3.78 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212605_s_at </td> <td> 212605_s_at </td> <td> AK025759 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK025759.1 /DEF=Homo sapiens cDNA: FLJ22106 fis, clone HEP17675. /FEA=mRNA /DB_XREF=gi:10438374 /UG=Hs.323470 Homo sapiens cDNA: FLJ22106 fis, clone HEP17675 </td> <td> AK025759 </td> <td> nudix (nucleoside diphosphate linked moiety X)-type motif 3 </td> <td> NUDT3 </td> <td> 11165 </td> <td> NM_006703 </td> <td> 0007267 // cell-cell signaling // traceable author statement /// 0015961 // diadenosine polyphosphate catabolic process // traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0071544 // diphosphoinositol polyphosphate catabolic process // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052840 // inositol diphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052841 // inositol bisdiphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052842 // inositol diphosphate pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052843 // inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052844 // inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052845 // inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052846 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity // inferred from electronic annotation /// 0052847 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation /// 0052848 // inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation </td> <td> 37.05 </td> <td> 75.55 </td> <td> 3.78 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209626_s_at </td> <td> 209626_s_at </td> <td> AI202969 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI202969 /FEA=EST /DB_XREF=gi:3755575 /DB_XREF=est:qr32d06.x1 /CLONE=IMAGE:1942571 /UG=Hs.197955 KIAA0704 protein /FL=gb:AY008372.1 </td> <td> AI202969 </td> <td> oxysterol binding protein-like 3 </td> <td> OSBPL3 </td> <td> 26031 </td> <td> NM_015550 /// NM_145320 /// NM_145321 /// NM_145322 /// NM_145323 /// NM_145324 /// NR_104111 /// NR_104112 /// XM_005249698 /// XM_006715681 /// XM_006715682 /// XM_006715683 /// XM_006715684 /// XR_428073 /// XR_428074 /// XR_428075 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation </td> <td> 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0097038 // perinuclear endoplasmic reticulum // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from direct assay </td> <td> -64.02 </td> <td> 109.36 </td> <td> -3.78 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 219530_at </td> <td> 219530_at </td> <td> NM_024675 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024675.1 /DEF=Homo sapiens hypothetical protein FLJ21816 (FLJ21816), mRNA. /FEA=mRNA /GEN=FLJ21816 /PROD=hypothetical protein FLJ21816 /DB_XREF=gi:13375939 /UG=Hs.86434 hypothetical protein FLJ21816 /FL=gb:NM_024675.1 </td> <td> NM_024675 </td> <td> partner and localizer of BRCA2 </td> <td> PALB2 </td> <td> 79728 </td> <td> NM_024675 </td> <td> 0000724 // double-strand break repair via homologous recombination // inferred from direct assay /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001833 // inner cell mass cell proliferation // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0036342 // post-anal tail morphogenesis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 33.97 </td> <td> 54.91 </td> <td> 3.78 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 217907_at </td> <td> 217907_at </td> <td> NM_014161 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014161.1 /DEF=Homo sapiens HSPC071 protein (HSPC071), mRNA. /FEA=mRNA /GEN=HSPC071 /PROD=HSPC071 protein /DB_XREF=gi:7661777 /UG=Hs.23038 HSPC071 protein /FL=gb:AL136633.1 gb:BC001623.1 gb:AF161556.1 gb:NM_014161.1 </td> <td> NM_014161 </td> <td> mitochondrial ribosomal protein L18 </td> <td> MRPL18 </td> <td> 29074 </td> <td> NM_014161 /// XM_006715466 </td> <td> 0006412 // translation // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0035928 // rRNA import into mitochondrion // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0008097 // 5S rRNA binding // inferred from direct assay </td> <td> 70.50 </td> <td> 266.02 </td> <td> 3.78 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212066_s_at </td> <td> 212066_s_at </td> <td> AB018272 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB018272.1 /DEF=Homo sapiens mRNA for KIAA0729 protein, partial cds. /FEA=mRNA /GEN=KIAA0729 /PROD=KIAA0729 protein /DB_XREF=gi:3882178 /UG=Hs.180948 KIAA0729 protein </td> <td> AB018272 </td> <td> ubiquitin specific peptidase 34 </td> <td> USP34 </td> <td> 9736 </td> <td> NM_014709 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0032781 // positive regulation of ATPase activity // inferred from electronic annotation /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from direct assay </td> <td>  </td> <td> 0001671 // ATPase activator activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation </td> <td> -87.52 </td> <td> 325.46 </td> <td> -3.77 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209201_x_at </td> <td> 209201_x_at </td> <td> L01639 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L01639.1 /DEF=Human (clone HSY3RR) neuropeptide Y receptor (NPYR) mRNA, complete cds.  /FEA=mRNA /GEN=NPYR /PROD=neuropeptide Y receptor /DB_XREF=gi:189313 /UG=Hs.89414 chemokine (C-X-C motif), receptor 4 (fusin) /FL=gb:L01639.1 gb:AF025375.1 gb:M99293.1 gb:L06797.1 gb:NM_003467.1 gb:AF147204.1 </td> <td> L01639 </td> <td> chemokine (C-X-C motif) receptor 4 </td> <td> CXCR4 </td> <td> 7852 </td> <td> NM_001008540 /// NM_003467 </td> <td> 0000187 // activation of MAPK activity // traceable author statement /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from expression pattern /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0002407 // dendritic cell chemotaxis // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007204 // positive regulation of cytosolic calcium ion concentration // traceable author statement /// 0007281 // germ cell development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008045 // motor neuron axon guidance // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from mutant phenotype /// 0030260 // entry into host cell // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0043217 // myelin maintenance // inferred from sequence or structural similarity /// 0048699 // generation of neurons // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0061351 // neural precursor cell proliferation // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // non-traceable author statement /// 0071345 // cellular response to cytokine stimulus // inferred from direct assay </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005764 // lysosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004950 // chemokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement /// 0016494 // C-X-C chemokine receptor activity // non-traceable author statement /// 0019955 // cytokine binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032027 // myosin light chain binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay </td> <td> -149.73 </td> <td> 340.49 </td> <td> -3.77 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212496_s_at </td> <td> 212496_s_at </td> <td> BE256900 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE256900 /FEA=EST /DB_XREF=gi:9127367 /DB_XREF=est:601112063F1 /CLONE=IMAGE:3352887 /UG=Hs.301011 KIAA0876 protein </td> <td> BE256900 </td> <td> lysine (K)-specific demethylase 4B </td> <td> KDM4B </td> <td> 23030 </td> <td> NM_015015 /// XM_005259521 /// XM_005259522 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -48.65 </td> <td> 130.53 </td> <td> -3.77 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212863_x_at </td> <td> 212863_x_at </td> <td> BF337195 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF337195 /FEA=EST /DB_XREF=gi:11283540 /DB_XREF=est:602034795F1 /CLONE=IMAGE:4182742 /UG=Hs.239737 C-terminal binding protein 1 </td> <td> BF337195 </td> <td> C-terminal binding protein 1 </td> <td> CTBP1 </td> <td> 1487 </td> <td> NM_001012614 /// NM_001328 /// XM_005272261 /// XM_005272262 /// XM_005272263 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007030 // Golgi organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // inferred from mutant phenotype /// 0034401 // regulation of transcription by chromatin organization // inferred from mutant phenotype /// 0035067 // negative regulation of histone acetylation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0051726 // regulation of cell cycle // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0090241 // negative regulation of histone H4 acetylation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity </td> <td> 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004616 // phosphogluconate dehydrogenase (decarboxylating) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from sequence or structural similarity /// 0070491 // repressing transcription factor binding // inferred from physical interaction </td> <td> 54.88 </td> <td> 369.86 </td> <td> 3.77 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 210139_s_at </td> <td> 210139_s_at </td> <td> L03203 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L03203.1 /DEF=Human peripheral myelin protein 22 (GAS3) mRNA, complete cds. /FEA=mRNA /GEN=GAS3 /PROD=peripheral myelin protein 22 /DB_XREF=gi:182984 /UG=Hs.103724 peripheral myelin protein 22 /FL=gb:L03203.1 </td> <td> L03203 </td> <td> peripheral myelin protein 22 </td> <td> PMP22 </td> <td> 5376 </td> <td> NM_000304 /// NM_001281455 /// NM_001281456 /// NM_153321 /// NM_153322 /// NR_104017 /// NR_104018 </td> <td> 0007268 // synaptic transmission // traceable author statement /// 0007422 // peripheral nervous system development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032288 // myelin assembly // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043218 // compact myelin // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 62.05 </td> <td> 290.07 </td> <td> 3.77 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 219335_at </td> <td> 219335_at </td> <td> NM_022838 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022838.1 /DEF=Homo sapiens hypothetical protein FLJ12969 (FLJ12969), mRNA. /FEA=mRNA /GEN=FLJ12969 /PROD=hypothetical protein FLJ12969 /DB_XREF=gi:12383085 /UG=Hs.119699 hypothetical protein FLJ12969 /FL=gb:NM_022838.1 </td> <td> NM_022838 </td> <td> armadillo repeat containing, X-linked 5 </td> <td> ARMCX5 </td> <td> 64860 </td> <td> NM_001168478 /// NM_001168479 /// NM_001168480 /// NM_001168482 /// NM_001168485 /// NM_022838 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from direct assay </td> <td> 0001540 // beta-amyloid binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation </td> <td> 34.00 </td> <td> 44.70 </td> <td> 3.77 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212306_at </td> <td> 212306_at </td> <td> AI741784 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI741784 /FEA=EST /DB_XREF=gi:5110072 /DB_XREF=est:wg22h09.x1 /CLONE=IMAGE:2365889 /UG=Hs.108614 KIAA0627 protein; Drosophila multiple asters (Mast)-like homolog 2 </td> <td> AI741784 </td> <td> cytoplasmic linker associated protein 2 </td> <td> CLASP2 </td> <td> 23122 </td> <td> NM_001207044 /// NM_015097 /// XM_006713036 /// XM_006713037 /// XM_006713038 /// XM_006713039 /// XM_006713040 /// XM_006713041 /// XM_006713042 /// XM_006713043 /// XM_006713044 /// XM_006713045 /// XM_006713046 /// XM_006713047 /// XM_006713048 /// XM_006713049 /// XM_006713050 /// XM_006713051 /// XM_006713052 /// XM_006713053 /// XM_006713054 /// XM_006713055 /// XM_006713056 /// XM_006713057 /// XM_006713058 /// XM_006713059 /// XM_006713060 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0031110 // regulation of microtubule polymerization or depolymerization // inferred from mutant phenotype /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0034453 // microtubule anchoring // inferred from mutant phenotype /// 0036065 // fucosylation // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005828 // kinetochore microtubule // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008107 // galactoside 2-alpha-L-fucosyltransferase activity // non-traceable author statement /// 0043515 // kinetochore binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from direct assay </td> <td> 31.30 </td> <td> 117.25 </td> <td> 3.77 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203357_s_at </td> <td> 203357_s_at </td> <td> NM_014296 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014296.1 /DEF=Homo sapiens calpain 7 (CAPN7), mRNA. /FEA=mRNA /GEN=CAPN7 /PROD=calpain 7 /DB_XREF=gi:7656958 /UG=Hs.7145 calpain 7 /FL=gb:AB028639.1 gb:NM_014296.1 </td> <td> NM_014296 </td> <td> calpain 7 </td> <td> CAPN7 </td> <td> 23473 </td> <td> NM_014296 /// XM_005265008 /// XM_006713080 /// XR_245107 /// XR_245108 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0010634 // positive regulation of epithelial cell migration // inferred from direct assay /// 0097264 // self proteolysis // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from direct assay /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0090541 // MIT domain binding // inferred from physical interaction </td> <td> 40.50 </td> <td> 77.90 </td> <td> 3.77 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201574_at </td> <td> 201574_at </td> <td> NM_004730 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004730.1 /DEF=Homo sapiens eukaryotic translation termination factor 1 (ETF1), mRNA.  /FEA=mRNA /GEN=ETF1 /PROD=eukaryotic translation termination factor 1 /DB_XREF=gi:4759033 /UG=Hs.77324 eukaryotic translation termination factor 1 /FL=gb:U90176.1 gb:M75715.1 gb:NM_004730.1 </td> <td> NM_004730 </td> <td> eukaryotic translation termination factor 1 </td> <td> ETF1 </td> <td> 2107 </td> <td> NM_001256302 /// NM_001282185 /// NM_001291974 /// NM_001291975 /// NM_004730 /// XM_005271920 /// XM_005271921 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006449 // regulation of translational termination // traceable author statement /// 0006479 // protein methylation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // traceable author statement /// 0003747 // translation release factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008079 // translation termination factor activity // traceable author statement /// 0016149 // translation release factor activity, codon specific // inferred from electronic annotation /// 0043022 // ribosome binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 141.57 </td> <td> 523.16 </td> <td> 3.77 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 220637_at </td> <td> 220637_at </td> <td> NM_024785 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024785.1 /DEF=Homo sapiens hypothetical protein FLJ22746 (FLJ22746), mRNA. /FEA=mRNA /GEN=FLJ22746 /PROD=hypothetical protein FLJ22746 /DB_XREF=gi:13376147 /UG=Hs.147585 hypothetical protein FLJ22746 /FL=gb:NM_024785.1 </td> <td> NM_024785 </td> <td> family with sequence similarity 124B </td> <td> FAM124B </td> <td> 79843 </td> <td> NM_001122779 /// NM_024785 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 62.03 </td> <td> 154.29 </td> <td> 3.77 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218358_at </td> <td> 218358_at </td> <td> NM_024324 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024324.1 /DEF=Homo sapiens hypothetical protein MGC11256 (MGC11256), mRNA. /FEA=mRNA /GEN=MGC11256 /PROD=hypothetical protein MGC11256 /DB_XREF=gi:13236568 /UG=Hs.28029 hypothetical protein MGC11256 /FL=gb:BC002894.1 gb:NM_024324.1 </td> <td> NM_024324 </td> <td> cysteine-rich with EGF-like domains 2 </td> <td> CRELD2 </td> <td> 79174 </td> <td> NM_001135101 /// NM_001284317 /// NM_001284318 /// NM_024324 /// NR_104295 /// XM_005261737 /// XM_005261738 </td> <td>  </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 154.65 </td> <td> 351.62 </td> <td> 3.77 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221931_s_at </td> <td> 221931_s_at </td> <td> AV701173 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV701173 /FEA=EST /DB_XREF=gi:10717503 /DB_XREF=est:AV701173 /CLONE=ADAAGH04 /UG=Hs.301048 Homo sapiens sec13-like protein mRNA, complete cds </td> <td> AV701173 </td> <td> SEH1-like (S. cerevisiae) </td> <td> SEH1L </td> <td> 81929 </td> <td> NM_001013437 /// NM_031216 /// XM_005258152 /// XM_005258153 /// XM_006722359 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006999 // nuclear pore organization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0007080 // mitotic metaphase plate congression // inferred from mutant phenotype /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051315 // attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031080 // nuclear pore outer ring // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 55.28 </td> <td> 128.89 </td> <td> 3.77 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209785_s_at </td> <td> 209785_s_at </td> <td> AF065214 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF065214.1 /DEF=Homo sapiens cytosolic phospholipase A2 gamma (cPLA2 gamma) mRNA, complete cds.  /FEA=mRNA /GEN=cPLA2 gamma /PROD=cytosolic phospholipase A2 gamma /DB_XREF=gi:3811344 /UG=Hs.18858 phospholipase A2, group IVC (cytosolic, calcium-independent) /FL=gb:AF058921.1 gb:AF065214.1 gb:NM_003706.1 </td> <td> AF065214 </td> <td> phospholipase A2, group IVC (cytosolic, calcium-independent) </td> <td> PLA2G4C </td> <td> 8605 </td> <td> NM_001159322 /// NM_001159323 /// NM_003706 /// XM_006723451 /// XM_006723452 /// XM_006723453 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006954 // inflammatory response // non-traceable author statement /// 0007567 // parturition // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019369 // arachidonic acid metabolic process // non-traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0036149 // phosphatidylinositol acyl-chain remodeling // traceable author statement /// 0036151 // phosphatidylcholine acyl-chain remodeling // traceable author statement /// 0036152 // phosphatidylethanolamine acyl-chain remodeling // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement /// 0046475 // glycerophospholipid catabolic process // inferred from direct assay </td> <td> 0005635 // nuclear envelope // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // traceable author statement </td> <td> 0004620 // phospholipase activity // inferred from electronic annotation /// 0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0005543 // phospholipid binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0047499 // calcium-independent phospholipase A2 activity // inferred from direct assay </td> <td> -268.20 </td> <td> 235.25 </td> <td> -3.77 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208646_at </td> <td> 208646_at </td> <td> AF116710 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF116710.1 /DEF=Homo sapiens PRO2640 mRNA, complete cds. /FEA=mRNA /PROD=PRO2640 /DB_XREF=gi:7959918 /UG=Hs.244621 ribosomal protein S14 /FL=gb:BC001126.1 gb:BC003401.1 gb:NM_005617.1 gb:AF116710.1 </td> <td> AF116710 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 0000028 // ribosomal small subunit assembly // inferred from mutant phenotype /// 0000028 // ribosomal small subunit assembly // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from electronic annotation /// 0006412 // translation // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006417 // regulation of translation // inferred from mutant phenotype /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0030218 // erythrocyte differentiation // inferred from mutant phenotype /// 0030490 // maturation of SSU-rRNA // inferred from sequence or structural similarity /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from sequence or structural similarity /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0045182 // translation regulator activity // inferred from mutant phenotype /// 0048027 // mRNA 5'-UTR binding // inferred from direct assay </td> <td> -124.15 </td> <td> 594.70 </td> <td> -3.76 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201827_at </td> <td> 201827_at </td> <td> AF113019 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF113019.1 /DEF=Homo sapiens PRO2451 mRNA, complete cds. /FEA=mRNA /PROD=PRO2451 /DB_XREF=gi:6642761 /UG=Hs.250581 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 /FL=gb:U66618.1 gb:NM_003077.1 gb:AF113019.1 </td> <td> AF113019 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 </td> <td> SMARCD2 </td> <td> 6603 </td> <td> NM_001098426 /// NM_003077 /// XM_005257604 </td> <td> 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay </td> <td> 38.60 </td> <td> 39.85 </td> <td> 3.76 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202855_s_at </td> <td> 202855_s_at </td> <td> AL513917 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL513917 /FEA=EST /DB_XREF=gi:12777411 /DB_XREF=est:AL513917 /CLONE=CL0BA006ZD09 (3 prime) /UG=Hs.85838 solute carrier family 16 (monocarboxylic acid transporters), member 3 /FL=gb:U81800.1 gb:NM_004207.1 </td> <td> AL513917 </td> <td> microRNA 6787 /// solute carrier family 16 (monocarboxylate transporter), member 3 </td> <td> MIR6787 /// SLC16A3 </td> <td> 9123 /// 102465472 </td> <td> NM_001042422 /// NM_001042423 /// NM_001206950 /// NM_001206951 /// NM_001206952 /// NM_004207 /// NR_106845 </td> <td> 0006090 // pyruvate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -250.50 </td> <td> 361.95 </td> <td> -3.76 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 214965_at </td> <td> 214965_at </td> <td> AF070574 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF070574.1 /DEF=Homo sapiens clone 24819 mRNA sequence. /FEA=mRNA /DB_XREF=gi:3387945 /UG=Hs.22316 Homo sapiens clone 24819 mRNA sequence </td> <td> AF070574 </td> <td> spermatogenesis associated 2-like </td> <td> SPATA2L </td> <td> 124044 </td> <td> NM_152339 /// XM_005256279 </td> <td>  </td> <td>  </td> <td>  </td> <td> 40.83 </td> <td> 50.04 </td> <td> 3.76 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 205397_x_at </td> <td> 205397_x_at </td> <td> U76622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U76622.1 /DEF=Human mad homolog JV15-2 mRNA, complete cds. /FEA=mRNA /GEN=JV15-2 /PROD=JV15-2 /DB_XREF=gi:1673576 /UG=Hs.211578 MAD (mothers against decapentaplegic, Drosophila) homolog 3 /FL=gb:U76622.1 gb:U68019.1 gb:NM_005902.1 </td> <td> U76622 </td> <td> SMAD family member 3 </td> <td> SMAD3 </td> <td> 4088 </td> <td> NM_001145102 /// NM_001145103 /// NM_001145104 /// NM_005902 /// XM_006720506 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from mutant phenotype /// 0001947 // heart looping // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0002520 // immune system development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0006955 // immune response // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0007369 // gastrulation // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010694 // positive regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0016202 // regulation of striated muscle tissue development // inferred from electronic annotation /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0019049 // evasion or tolerance of host defenses by virus // inferred from direct assay /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0031053 // primary miRNA processing // traceable author statement /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032731 // positive regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032909 // regulation of transforming growth factor beta2 production // inferred from mutant phenotype /// 0032916 // positive regulation of transforming growth factor beta3 production // inferred from electronic annotation /// 0032924 // activin receptor signaling pathway // inferred from mutant phenotype /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0035413 // positive regulation of catenin import into nucleus // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0038092 // nodal signaling pathway // inferred from mutant phenotype /// 0042060 // wound healing // traceable author statement /// 0042110 // T cell activation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from mutant phenotype /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from mutant phenotype /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045930 // negative regulation of mitotic cell cycle // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0048340 // paraxial mesoderm morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048617 // embryonic foregut morphogenesis // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050776 // regulation of immune response // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0050927 // positive regulation of positive chemotaxis // inferred from electronic annotation /// 0051098 // regulation of binding // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from electronic annotation /// 0060039 // pericardium development // inferred from electronic annotation /// 0060290 // transdifferentiation // inferred from electronic annotation /// 0061045 // negative regulation of wound healing // inferred from electronic annotation /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 0097191 // extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 0097296 // activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway // inferred from electronic annotation /// 1901313 // positive regulation of gene expression involved in extracellular matrix organization // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005637 // nuclear inner membrane // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0043235 // receptor complex // inferred from mutant phenotype /// 0071141 // SMAD protein complex // inferred from direct assay /// 0071144 // SMAD2-SMAD3 protein complex // inferred from direct assay </td> <td> 0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000988 // protein binding transcription factor activity // inferred from direct assay /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005160 // transforming growth factor beta receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019902 // phosphatase binding // inferred from physical interaction /// 0030618 // transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity // inferred from direct assay /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035326 // enhancer binding // inferred by curator /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070410 // co-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction </td> <td> -55.90 </td> <td> 72.08 </td> <td> -3.76 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203941_at </td> <td> 203941_at </td> <td> NM_018250 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018250.1 /DEF=Homo sapiens hypothetical protein FLJ10871 (FLJ10871), mRNA. /FEA=mRNA /GEN=FLJ10871 /PROD=hypothetical protein FLJ10871 /DB_XREF=gi:8922725 /UG=Hs.15562 hypothetical protein FLJ10871 /FL=gb:NM_018250.1 </td> <td> NM_018250 </td> <td> integrator complex subunit 9 </td> <td> INTS9 </td> <td> 55756 </td> <td> NM_001145159 /// NM_001172562 /// NM_018250 /// NR_026826 /// XM_005273568 /// XM_006716356 /// XM_006716357 </td> <td> 0016180 // snRNA processing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0032039 // integrator complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 39.12 </td> <td> 129.51 </td> <td> 3.76 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209511_at </td> <td> 209511_at </td> <td> BC003582 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003582.1 /DEF=Homo sapiens, polymerase (RNA) II (DNA directed) polypeptide F, clone MGC:2669, mRNA, complete cds.  /FEA=mRNA /PROD=polymerase (RNA) II (DNA directed) polypeptideF /DB_XREF=gi:13097770 /UG=Hs.46405 polymerase (RNA) II (DNA directed) polypeptide F /FL=gb:NM_021974.1 gb:BC003582.1 </td> <td> BC003582 </td> <td> polymerase (RNA) II (DNA directed) polypeptide F </td> <td> POLR2F </td> <td> 5435 </td> <td> NM_021974 /// XM_005261649 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0005666 // DNA-directed RNA polymerase III complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005736 // DNA-directed RNA polymerase I complex // not recorded /// 0005829 // cytosol // traceable author statement </td> <td> 0001054 // RNA polymerase I activity // not recorded /// 0001055 // RNA polymerase II activity // not recorded /// 0001056 // RNA polymerase III activity // not recorded /// 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation </td> <td> 46.88 </td> <td> 161.49 </td> <td> 3.76 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212766_s_at </td> <td> 212766_s_at </td> <td> AW294587 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW294587 /FEA=EST /DB_XREF=gi:6701223 /DB_XREF=est:UI-H-BI2-ahk-f-08-0-UI.s1 /CLONE=IMAGE:2727302 /UG=Hs.301904 Homo sapiens, Similar to hypothetical protein FLJ12484, clone MGC:3008, mRNA, complete cds </td> <td> AW294587 </td> <td> interferon stimulated exonuclease gene 20kDa-like 2 </td> <td> ISG20L2 </td> <td> 81875 </td> <td> NM_030980 /// XM_005245516 /// XM_005245517 /// XM_005245518 /// XM_006711560 /// XM_006711561 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 43.35 </td> <td> 87.92 </td> <td> 3.76 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212974_at </td> <td> 212974_at </td> <td> AI808958 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI808958 /FEA=EST /DB_XREF=gi:5395524 /DB_XREF=est:wf67a09.x1 /CLONE=IMAGE:2360632 /UG=Hs.18166 KIAA0870 protein </td> <td> AI808958 </td> <td> DENN/MADD domain containing 3 </td> <td> DENND3 </td> <td> 22898 </td> <td> NM_014957 /// XM_005250838 /// XM_005250839 /// XM_005250840 /// XM_005250841 /// XM_005250842 /// XM_005250843 /// XM_005250844 /// XM_005250845 /// XR_242384 </td> <td> 0008333 // endosome to lysosome transport // inferred from sequence or structural similarity /// 0032313 // regulation of Rab GTPase activity // inferred from direct assay /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from direct assay /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0044257 // cellular protein catabolic process // inferred from sequence or structural similarity </td> <td>  </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0017112 // Rab guanyl-nucleotide exchange factor activity // inferred from direct assay </td> <td> -34.05 </td> <td> 64.92 </td> <td> -3.76 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201912_s_at </td> <td> 201912_s_at </td> <td> NM_002094 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002094.1 /DEF=Homo sapiens G1 to S phase transition 1 (GSPT1), mRNA. /FEA=mRNA /GEN=GSPT1 /PROD=G1 to S phase transition 1 /DB_XREF=gi:4504166 /UG=Hs.2707 G1 to S phase transition 1 /FL=gb:NM_002094.1 </td> <td> NM_002094 </td> <td> G1 to S phase transition 1 </td> <td> GSPT1 </td> <td> 2935 </td> <td> NM_001130006 /// NM_001130007 /// NM_002094 /// XM_005255274 /// XM_005255275 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006415 // translational termination // inferred from mutant phenotype /// 0006479 // protein methylation // inferred from direct assay </td> <td> 0005622 // intracellular // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003747 // translation release factor activity // inferred from mutant phenotype /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -71.35 </td> <td> 287.45 </td> <td> -3.75 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201635_s_at </td> <td> 201635_s_at </td> <td> AI990766 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI990766 /FEA=EST /DB_XREF=gi:5837647 /DB_XREF=est:ws23e06.x1 /CLONE=IMAGE:2498050 /UG=Hs.82712 fragile X mental retardation, autosomal homolog 1 /FL=gb:NM_005087.1 gb:U25165.1 </td> <td> AI990766 </td> <td> fragile X mental retardation, autosomal homolog 1 </td> <td> FXR1 </td> <td> 8087 </td> <td> NM_001013438 /// NM_001013439 /// NM_005087 /// XM_005247813 /// XM_005247814 /// XM_005247815 /// XM_005247816 /// XM_006713775 </td> <td> 0006915 // apoptotic process // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005844 // polysome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0043034 // costamere // inferred from electronic annotation </td> <td> 0002151 // G-quadruplex RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -170.67 </td> <td> 290.31 </td> <td> -3.75 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 214882_s_at </td> <td> 214882_s_at </td> <td> BG254869 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG254869 /FEA=EST /DB_XREF=gi:12764685 /DB_XREF=est:602369310F1 /CLONE=IMAGE:4477371 /UG=Hs.73965 splicing factor, arginineserine-rich 2 </td> <td> BG254869 </td> <td> microRNA 636 /// serine/arginine-rich splicing factor 2 </td> <td> MIR636 /// SRSF2 </td> <td> 6427 /// 693221 </td> <td> NM_001195427 /// NM_003016 /// NR_030366 /// NR_036608 /// XR_429913 /// XR_429914 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 2001141 // regulation of RNA biosynthetic process // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0016605 // PML body // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 261.73 </td> <td> 652.01 </td> <td> 3.75 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 214092_x_at </td> <td> 214092_x_at </td> <td> AI928127 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI928127 /FEA=EST /DB_XREF=gi:5664091 /DB_XREF=est:wp11d09.x1 /CLONE=IMAGE:2464529 /UG=Hs.190452 KIAA0365 gene product </td> <td> AI928127 </td> <td> SURP and G patch domain containing 2 </td> <td> SUGP2 </td> <td> 10147 </td> <td> NM_001017392 /// NM_014884 /// XR_430120 /// XR_430121 /// XR_430122 /// XR_430123 /// XR_430124 </td> <td> 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 34.70 </td> <td> 32.62 </td> <td> 3.75 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201469_s_at </td> <td> 201469_s_at </td> <td> AI809967 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI809967 /FEA=EST /DB_XREF=gi:5396533 /DB_XREF=est:wf64c03.x1 /CLONE=IMAGE:2360356 /UG=Hs.81972 SHC (Src homology 2 domain-containing) transforming protein 1 /FL=gb:NM_003029.1 gb:U73377.1 </td> <td> AI809967 </td> <td> SHC (Src homology 2 domain containing) transforming protein 1 </td> <td> SHC1 </td> <td> 6464 </td> <td> NM_001130040 /// NM_001130041 /// NM_001202859 /// NM_003029 /// NM_183001 /// XM_005245449 /// XM_005245450 /// XM_005245451 /// XM_005245452 </td> <td> 0000165 // MAPK cascade // inferred from direct assay /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0002088 // lens development in camera-type eye // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007176 // regulation of epidermal growth factor-activated receptor activity // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // non-traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030879 // mammary gland development // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0033599 // regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045740 // positive regulation of DNA replication // inferred from sequence or structural similarity /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048589 // developmental growth // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0051569 // regulation of histone H3-K4 methylation // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0070435 // Shc-EGFR complex // inferred from sequence or structural similarity </td> <td> 0004713 // protein tyrosine kinase activity // traceable author statement /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // traceable author statement /// 0005154 // epidermal growth factor receptor binding // inferred from sequence or structural similarity /// 0005158 // insulin receptor binding // inferred from physical interaction /// 0005159 // insulin-like growth factor receptor binding // inferred from physical interaction /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction </td> <td> 68.20 </td> <td> 230.15 </td> <td> 3.75 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218838_s_at </td> <td> 218838_s_at </td> <td> NM_022492 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022492.1 /DEF=Homo sapiens hypothetical protein FLJ12788 (FLJ12788), mRNA. /FEA=mRNA /GEN=FLJ12788 /PROD=hypothetical protein FLJ12788 /DB_XREF=gi:11968048 /UG=Hs.20242 hypothetical protein FLJ12788 /FL=gb:NM_022492.1 </td> <td> NM_022492 </td> <td> tetratricopeptide repeat domain 31 </td> <td> TTC31 </td> <td> 64427 </td> <td> NM_022492 /// NR_027749 /// XM_005264491 /// XM_005264492 /// XM_005264493 /// XM_005264496 /// XM_005264497 /// XM_006712077 /// XR_244951 /// XR_244952 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 34.43 </td> <td> 27.61 </td> <td> 3.74 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200814_at </td> <td> 200814_at </td> <td> NM_006263 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006263.1 /DEF=Homo sapiens proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) (PSME1), mRNA.  /FEA=mRNA /GEN=PSME1 /PROD=proteasome (prosome, macropain) activatorsubunit 1 (PA28 alpha) /DB_XREF=gi:5453989 /UG=Hs.75348 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) /FL=gb:BC000352.1 gb:L07633.1 gb:NM_006263.1 </td> <td> NM_006263 </td> <td> proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) </td> <td> PSME1 </td> <td> 5720 </td> <td> NM_001281528 /// NM_001281529 /// NM_006263 /// NM_176783 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010950 // positive regulation of endopeptidase activity // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019884 // antigen processing and presentation of exogenous antigen // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008537 // proteasome activator complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0061133 // endopeptidase activator activity // inferred from electronic annotation </td> <td> -83.57 </td> <td> 412.66 </td> <td> -3.74 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218422_s_at </td> <td> 218422_s_at </td> <td> NM_022118 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022118.1 /DEF=Homo sapiens cutaneous T-cell lymphoma tumor antigen se70-2 (SE70-2), mRNA.  /FEA=mRNA /GEN=SE70-2 /PROD=cutaneous T-cell lymphoma tumor antigen se70-2 /DB_XREF=gi:11545836 /UG=Hs.39140 cutaneous T-cell lymphoma tumor antigen se70-2 /FL=gb:AF273052.1 gb:NM_022118.1 gb:BC000791.1 </td> <td> NM_022118 </td> <td> RNA binding motif protein 26 </td> <td> RBM26 </td> <td> 64062 </td> <td> NM_001286631 /// NM_001286632 /// NM_018605 /// NM_022118 /// XM_005266491 /// XM_005266492 /// XM_005266493 /// XM_005266494 /// XM_005266496 /// XM_005266497 /// XM_005266498 /// XM_005266499 /// XM_005266501 /// XM_006719855 /// XM_006719856 /// XM_006719857 /// XM_006719858 /// XM_006719859 /// XM_006719860 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay </td> <td>  </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 40.95 </td> <td> 101.17 </td> <td> 3.74 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 205283_at </td> <td> 205283_at </td> <td> NM_006731 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006731.1 /DEF=Homo sapiens Fukuyama type congenital muscular dystrophy (FCMD), mRNA.  /FEA=mRNA /GEN=FCMD /PROD=fukutin /DB_XREF=gi:5803014 /UG=Hs.55777 Fukuyama type congenital muscular dystrophy /FL=gb:AB008226.1 gb:NM_006731.1 </td> <td> NM_006731 </td> <td> fukutin </td> <td> FKTN </td> <td> 2218 </td> <td> NM_001079802 /// NM_001198963 /// NM_006731 /// XM_005251803 /// XM_005251804 /// XM_006717006 /// XM_006717007 /// XM_006717008 /// XM_006717009 /// XM_006717010 /// XM_006717011 /// XM_006717012 /// XM_006717013 /// XM_006717014 </td> <td> 0007399 // nervous system development // traceable author statement /// 0007517 // muscle organ development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from mutant phenotype /// 0060049 // regulation of protein glycosylation // non-traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005801 // cis-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0016740 // transferase activity // inferred from electronic annotation </td> <td> 36.98 </td> <td> 41.01 </td> <td> 3.74 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201207_at </td> <td> 201207_at </td> <td> NM_021137 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021137.1 /DEF=Homo sapiens tumor necrosis factor, alpha-induced protein 1 (endothelial) (TNFAIP1), mRNA.  /FEA=mRNA /GEN=TNFAIP1 /PROD=tumor necrosis factor, alpha-induced protein 1(endothelial) /DB_XREF=gi:10863936 /UG=Hs.76090 tumor necrosis factor, alpha-induced protein 1 (endothelial) /FL=gb:NM_021137.1 gb:BC001643.1 gb:BC001949.1 gb:BC003694.1 gb:M80783.1 </td> <td> NM_021137 </td> <td> tumor necrosis factor, alpha-induced protein 1 (endothelial) </td> <td> TNFAIP1 </td> <td> 7126 </td> <td> NM_021137 </td> <td> 0006260 // DNA replication // inferred from sequence or structural similarity /// 0006915 // apoptotic process // traceable author statement /// 0006955 // immune response // inferred from expression pattern /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0016477 // cell migration // inferred from mutant phenotype /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035024 // negative regulation of Rho protein signal transduction // inferred from mutant phenotype /// 0043149 // stress fiber assembly // inferred from mutant phenotype /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017049 // GTP-Rho binding // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 77.67 </td> <td> 293.99 </td> <td> 3.74 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 211528_x_at </td> <td> 211528_x_at </td> <td> M90685 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M90685.1 /DEF=Human lymphocyte antigen (HLA-G2.2) mRNA, complete cds. /FEA=mRNA /GEN=HLA-G2.2 /PROD=b2 microglobulin /DB_XREF=gi:184211 /UG=Hs.73885 HLA-G histocompatibility antigen, class I, G /FL=gb:M90685.1 </td> <td> M90685 </td> <td> major histocompatibility complex, class I, G </td> <td> HLA-G </td> <td> 3135 </td> <td> NM_002127 /// XM_006715080 /// XM_006725041 /// XM_006725700 /// XM_006725909 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002666 // positive regulation of T cell tolerance induction // inferred from mutant phenotype /// 0002767 // immune response-inhibiting cell surface receptor signaling pathway // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0042130 // negative regulation of T cell proliferation // inferred from direct assay /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045591 // positive regulation of regulatory T cell differentiation // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 2001199 // negative regulation of dendritic cell differentiation // inferred from direct assay </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0042605 // peptide antigen binding // not recorded /// 0042803 // protein homodimerization activity // non-traceable author statement </td> <td> -163.85 </td> <td> 494.73 </td> <td> -3.74 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218506_x_at </td> <td> 218506_x_at </td> <td> NM_018459 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018459.1 /DEF=Homo sapiens uncharacterized bone marrow protein BM045 (BM045), mRNA.  /FEA=mRNA /GEN=BM045 /PROD=uncharacterized bone marrow protein BM045 /DB_XREF=gi:8922103 /UG=Hs.8750 uncharacterized bone marrow protein BM045 /FL=gb:AF217521.1 gb:NM_018459.1 </td> <td> NM_018459 </td> <td> glyoxylate reductase 1 homolog (Arabidopsis) </td> <td> GLYR1 </td> <td> 84656 </td> <td> NM_032569 /// XM_005255637 /// XM_005255638 /// XM_005255639 /// XM_005255640 /// XR_243321 </td> <td> 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0004616 // phosphogluconate dehydrogenase (decarboxylating) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0035064 // methylated histone binding // inferred from direct assay /// 0050662 // coenzyme binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 62.28 </td> <td> 128.84 </td> <td> 3.73 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212174_at </td> <td> 212174_at </td> <td> W02312 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W02312 /FEA=EST /DB_XREF=gi:1274291 /DB_XREF=est:za08d08.r1 /CLONE=IMAGE:291951 /UG=Hs.171811 adenylate kinase 2 </td> <td> W02312 </td> <td> adenylate kinase 2 </td> <td> AK2 </td> <td> 204 </td> <td> NM_001199199 /// NM_001625 /// NM_013411 /// NR_037591 /// NR_037592 /// XR_246248 </td> <td> 0001889 // liver development // inferred from electronic annotation /// 0006119 // oxidative phosphorylation // inferred from electronic annotation /// 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006172 // ADP biosynthetic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046033 // AMP metabolic process // inferred from electronic annotation /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0046060 // dATP metabolic process // inferred from electronic annotation /// 0046939 // nucleotide phosphorylation // inferred from electronic annotation /// 0046939 // nucleotide phosphorylation // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0097066 // response to thyroid hormone // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0036126 // sperm flagellum // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097226 // sperm mitochondrial sheath // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004017 // adenylate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016776 // phosphotransferase activity, phosphate group as acceptor // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation </td> <td> 65.30 </td> <td> 172.10 </td> <td> 3.73 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 219067_s_at </td> <td> 219067_s_at </td> <td> NM_017615 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017615.1 /DEF=Homo sapiens hypothetical protein FLJ20003 (FLJ20003), mRNA. /FEA=mRNA /GEN=FLJ20003 /PROD=hypothetical protein FLJ20003 /DB_XREF=gi:8923008 /UG=Hs.258798 hypothetical protein FLJ20003 /FL=gb:NM_017615.1 </td> <td> NM_017615 </td> <td> non-SMC element 4 homolog A (S. cerevisiae) </td> <td> NSMCE4A </td> <td> 54780 </td> <td> NM_001167865 /// NM_017615 /// XM_005269928 /// XM_005269929 /// XM_005269930 /// XR_428706 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from mutant phenotype </td> <td> 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0030915 // Smc5-Smc6 complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 42.75 </td> <td> 61.27 </td> <td> 3.73 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208739_x_at </td> <td> 208739_x_at </td> <td> L76416 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L76416.1 /DEF=Homo sapiens MIF2 suppressor (HSMT3) mRNA, complete cds. /FEA=mRNA /GEN=HSMT3 /PROD=MIF2 suppressor /DB_XREF=gi:5566605 /UG=Hs.180139 SMT3 (suppressor of mif two 3, yeast) homolog 2 /FL=gb:L76416.1 gb:NM_006937.1 </td> <td> L76416 </td> <td> small ubiquitin-related modifier 2-like /// small ubiquitin-like modifier 2 /// small ubiquitin-like modifier 3 </td> <td> LOC101929087 /// SUMO2 /// SUMO3 </td> <td> 6612 /// 6613 /// 101929087 </td> <td> NM_001005849 /// NM_001286416 /// NM_006936 /// NM_006937 /// XM_005250081 /// XM_005276013 /// XM_005276311 </td> <td> 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // traceable author statement /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000776 // kinetochore // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 173.15 </td> <td> 770.00 </td> <td> 3.73 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204297_at </td> <td> 204297_at </td> <td> NM_002647 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002647.1 /DEF=Homo sapiens phosphoinositide-3-kinase, class 3 (PIK3C3), mRNA. /FEA=mRNA /GEN=PIK3C3 /PROD=phosphoinositide-3-kinase, class 3 /DB_XREF=gi:4505800 /UG=Hs.32971 phosphoinositide-3-kinase, class 3 /FL=gb:NM_002647.1 </td> <td> NM_002647 </td> <td> phosphatidylinositol 3-kinase, catalytic subunit type 3 </td> <td> PIK3C3 </td> <td> 5289 </td> <td> NM_002647 </td> <td> 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006914 // autophagy // inferred from electronic annotation /// 0007032 // endosome organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from electronic annotation /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from mutant phenotype /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // traceable author statement /// 0043201 // response to leucine // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0050708 // regulation of protein secretion // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005930 // axoneme // inferred from sequence or structural similarity /// 0005942 // phosphatidylinositol 3-kinase complex // not recorded /// 0016020 // membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0035004 // phosphatidylinositol 3-kinase activity // inferred from electronic annotation </td> <td> -59.10 </td> <td> 127.55 </td> <td> -3.73 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201239_s_at </td> <td> 201239_s_at </td> <td> BF530535 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF530535 /FEA=EST /DB_XREF=gi:11617898 /DB_XREF=est:602071788F1 /CLONE=IMAGE:4214660 /UG=Hs.77665 KIAA0102 gene product /FL=gb:D14658.1 gb:NM_014752.1 </td> <td> BF530535 </td> <td> signal peptidase complex subunit 2 homolog (S. cerevisiae) </td> <td> SPCS2 </td> <td> 9789 </td> <td> NM_014752 </td> <td> 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005787 // signal peptidase complex // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -69.22 </td> <td> 358.24 </td> <td> -3.73 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201227_s_at </td> <td> 201227_s_at </td> <td> NM_005004 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005004.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8 (19kD, ASHI) (NDUFB8), mRNA.  /FEA=mRNA /GEN=NDUFB8 /PROD=NADH dehydrogenase (ubiquinone) 1 betasubcomplex, 8 (19kD, ASHI) /DB_XREF=gi:4826853 /UG=Hs.198273 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8 (19kD, ASHI) /FL=gb:BC000466.1 gb:AF044958.1 gb:AF077028.1 gb:NM_005004.1 gb:AL080056.1 </td> <td> NM_005004 </td> <td> NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa </td> <td> NDUFB8 </td> <td> 4714 </td> <td> NM_001284367 /// NM_001284368 /// NM_005004 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0003954 // NADH dehydrogenase activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> 83.95 </td> <td> 586.40 </td> <td> 3.73 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200948_at </td> <td> 200948_at </td> <td> NM_005439 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005439.1 /DEF=Homo sapiens myeloid leukemia factor 2 (MLF2), mRNA. /FEA=mRNA /GEN=MLF2 /PROD=myeloid leukemia factor 2 /DB_XREF=gi:4885486 /UG=Hs.79026 myeloid leukemia factor 2 /FL=gb:BC000898.1 gb:BC002340.1 gb:U57342.1 gb:AF070539.1 gb:NM_005439.1 </td> <td> NM_005439 </td> <td> myeloid leukemia factor 2 </td> <td> MLF2 </td> <td> 8079 </td> <td> NM_005439 /// NR_026581 </td> <td> 0006952 // defense response // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td>  </td> <td> 68.40 </td> <td> 247.78 </td> <td> 3.73 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200672_x_at </td> <td> 200672_x_at </td> <td> NM_003128 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003128.1 /DEF=Homo sapiens spectrin, beta, non-erythrocytic 1 (SPTBN1), mRNA. /FEA=mRNA /GEN=SPTBN1 /PROD=spectrin, beta, non-erythrocytic 1 /DB_XREF=gi:4507194 /UG=Hs.107164 spectrin, beta, non-erythrocytic 1 /FL=gb:M96803.1 gb:NM_003128.1 </td> <td> NM_003128 </td> <td> spectrin, beta, non-erythrocytic 1 </td> <td> SPTBN1 </td> <td> 6711 </td> <td> NM_003128 /// NM_178313 /// XM_005264517 /// XM_005264518 /// XM_006712087 </td> <td> 0000281 // mitotic cytokinesis // inferred from mutant phenotype /// 0007009 // plasma membrane organization // inferred from mutant phenotype /// 0007182 // common-partner SMAD protein phosphorylation // inferred from electronic annotation /// 0007184 // SMAD protein import into nucleus // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0043001 // Golgi to plasma membrane protein transport // inferred from mutant phenotype /// 0051693 // actin filament capping // inferred from electronic annotation /// 0071709 // membrane assembly // inferred from mutant phenotype /// 0072661 // protein targeting to plasma membrane // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008091 // spectrin // inferred from electronic annotation /// 0014731 // spectrin-associated cytoskeleton // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030673 // axolemma // inferred from sequence or structural similarity /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031430 // M band // inferred from electronic annotation /// 0032437 // cuticular plate // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction /// 0030506 // ankyrin binding // non-traceable author statement /// 0032403 // protein complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -107.38 </td> <td> 263.21 </td> <td> -3.73 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 210840_s_at </td> <td> 210840_s_at </td> <td> D29640 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D29640.1 /DEF=Human mRNA for KIAA0051 gene, complete cds. /FEA=mRNA /GEN=KIAA0051 /DB_XREF=gi:473930 /UG=Hs.1742 IQ motif containing GTPase activating protein 1 /FL=gb:D29640.1 </td> <td> D29640 </td> <td> IQ motif containing GTPase activating protein 1 </td> <td> IQGAP1 </td> <td> 8826 </td> <td> NM_003870 /// XM_005254984 </td> <td> 0001817 // regulation of cytokine production // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0035305 // negative regulation of dephosphorylation // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from mutant phenotype /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 0072015 // glomerular visceral epithelial cell development // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005874 // microtubule // inferred from direct assay /// 0005884 // actin filament // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from direct assay /// 0031252 // cell leading edge // inferred from electronic annotation /// 0036057 // slit diaphragm // inferred from sequence or structural similarity /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005095 // GTPase inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // traceable author statement /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043539 // protein serine/threonine kinase activator activity // inferred from direct assay /// 0048365 // Rac GTPase binding // inferred from electronic annotation </td> <td> -81.65 </td> <td> 428.75 </td> <td> -3.73 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 210418_s_at </td> <td> 210418_s_at </td> <td> AF023265 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF023265.1 /DEF=Homo sapiens NAD+-specific isocitrate dehydrogenase beta subunit isoform A mRNA, nuclear gene encoding mitochondrial product, complete cds.  /FEA=mRNA /PROD=NAD+-specific isocitrate dehydrogenase betasubunit isoform A /DB_XREF=gi:4103445 /UG=Hs.155410 isocitrate dehydrogenase 3 (NAD+) beta /FL=gb:AF023265.1 </td> <td> AF023265 </td> <td> isocitrate dehydrogenase 3 (NAD+) beta </td> <td> IDH3B </td> <td> 3420 </td> <td> NM_001258384 /// NM_006899 /// NM_174855 /// NM_174856 /// XM_005260716 </td> <td> 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006102 // isocitrate metabolic process // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from electronic annotation /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004449 // isocitrate dehydrogenase (NAD+) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 78.35 </td> <td> 213.22 </td> <td> 3.72 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208623_s_at </td> <td> 208623_s_at </td> <td> J05021 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:J05021.1 /DEF=Human cytovillin 2 (VIL2) mRNA, complete cds. /FEA=mRNA /GEN=VIL2 /DB_XREF=gi:340216 /UG=Hs.155191 villin 2 (ezrin) /FL=gb:J05021.1 gb:AL162086.1 gb:NM_003379.2 </td> <td> J05021 </td> <td> ezrin </td> <td> EZR </td> <td> 7430 </td> <td> NM_001111077 /// NM_003379 /// XM_006715561 </td> <td> 0007016 // cytoskeletal anchoring at plasma membrane // non-traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from expression pattern /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from genetic interaction /// 0022614 // membrane to membrane docking // inferred from expression pattern /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0031623 // receptor internalization // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from direct assay /// 0061028 // establishment of endothelial barrier // inferred from genetic interaction </td> <td> 0001726 // ruffle // inferred from direct assay /// 0001931 // uropod // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005902 // microvillus // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from direct assay /// 0030175 // filopodium // inferred from direct assay /// 0030315 // T-tubule // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // traceable author statement /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0044393 // microspike // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0051286 // cell tip // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097449 // astrocyte projection // inferred from electronic annotation /// 0097454 // Schwann cell microvillus // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050839 // cell adhesion molecule binding // inferred from physical interaction /// 0051015 // actin filament binding // inferred from direct assay </td> <td> 52.40 </td> <td> 124.55 </td> <td> 3.72 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203254_s_at </td> <td> 203254_s_at </td> <td> NM_006289 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006289.1 /DEF=Homo sapiens talin (TLN), mRNA. /FEA=mRNA /GEN=TLN /PROD=talin /DB_XREF=gi:5454129 /UG=Hs.278559 talin /FL=gb:AF078828.1 gb:NM_006289.1 gb:AF177198.1 </td> <td> NM_006289 </td> <td> talin 1 </td> <td> TLN1 </td> <td> 7094 </td> <td> NM_006289 /// XM_005251564 /// XM_006716852 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0006928 // cellular component movement // non-traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007016 // cytoskeletal anchoring at plasma membrane // non-traceable author statement /// 0007043 // cell-cell junction assembly // traceable author statement /// 0007044 // cell-substrate junction assembly // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0001726 // ruffle // inferred from sequence or structural similarity /// 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005911 // cell-cell junction // inferred by curator /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0005925 // focal adhesion // non-traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017166 // vinculin binding // inferred from physical interaction /// 0030274 // LIM domain binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> 51.70 </td> <td> 148.70 </td> <td> 3.71 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203871_at </td> <td> 203871_at </td> <td> NM_015670 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015670.1 /DEF=Homo sapiens sentrinSUMO-specific protease 3 (SENP3), mRNA. /FEA=mRNA /GEN=SENP3 /PROD=sentrinSUMO-specific protease 3 /DB_XREF=gi:7661681 /UG=Hs.118926 sentrinSUMO-specific protease 3 /FL=gb:AY008763.1 gb:AL050283.1 gb:NM_015670.1 </td> <td> NM_015670 </td> <td> SUMO1/sentrin/SMT3 specific peptidase 3 </td> <td> SENP3 </td> <td> 26168 </td> <td> NM_015670 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0019538 // protein metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay </td> <td> 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 44.33 </td> <td> 79.01 </td> <td> 3.71 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201970_s_at </td> <td> 201970_s_at </td> <td> NM_002482 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002482.1 /DEF=Homo sapiens nuclear autoantigenic sperm protein (histone-binding) (NASP), mRNA.  /FEA=mRNA /GEN=NASP /PROD=nuclear autoantigenic sperm protein(histone-binding) /DB_XREF=gi:4505332 /UG=Hs.243886 nuclear autoantigenic sperm protein (histone-binding) /FL=gb:M97856.1 gb:NM_002482.1 </td> <td> NM_002482 </td> <td> nuclear autoantigenic sperm protein (histone-binding) </td> <td> NASP </td> <td> 4678 </td> <td> NM_001195193 /// NM_002482 /// NM_152298 /// NM_172164 /// XM_005270888 /// XM_005270889 </td> <td> 0001824 // blastocyst development // inferred from sequence or structural similarity /// 0006260 // DNA replication // inferred from sequence or structural similarity /// 0006335 // DNA replication-dependent nucleosome assembly // inferred from direct assay /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0043486 // histone exchange // inferred from sequence or structural similarity </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from sequence or structural similarity </td> <td> 60.37 </td> <td> 138.66 </td> <td> 3.71 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213446_s_at </td> <td> 213446_s_at </td> <td> AI679073 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI679073 /FEA=EST /DB_XREF=gi:4889255 /DB_XREF=est:tu71g05.x1 /CLONE=IMAGE:2256536 /UG=Hs.1742 IQ motif containing GTPase activating protein 1 </td> <td> AI679073 </td> <td> IQ motif containing GTPase activating protein 1 </td> <td> IQGAP1 </td> <td> 8826 </td> <td> NM_003870 /// XM_005254984 </td> <td> 0001817 // regulation of cytokine production // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0035305 // negative regulation of dephosphorylation // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from mutant phenotype /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 0072015 // glomerular visceral epithelial cell development // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005874 // microtubule // inferred from direct assay /// 0005884 // actin filament // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from direct assay /// 0031252 // cell leading edge // inferred from electronic annotation /// 0036057 // slit diaphragm // inferred from sequence or structural similarity /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005095 // GTPase inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // traceable author statement /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043539 // protein serine/threonine kinase activator activity // inferred from direct assay /// 0048365 // Rac GTPase binding // inferred from electronic annotation </td> <td> -107.72 </td> <td> 251.26 </td> <td> -3.71 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203043_at </td> <td> 203043_at </td> <td> NM_004729 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004729.1 /DEF=Homo sapiens Ac-like transposable element (ALTE), mRNA. /FEA=mRNA /GEN=ALTE /PROD=Ac-like transposable element /DB_XREF=gi:4759257 /UG=Hs.9933 Ac-like transposable element /FL=gb:AB018328.1 gb:NM_004729.1 </td> <td> NM_004729 </td> <td> zinc finger, BED-type containing 1 </td> <td> ZBED1 </td> <td> 9189 </td> <td> NM_001171135 /// NM_001171136 /// NM_004729 </td> <td> 0008152 // metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0000228 // nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004803 // transposase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> 46.25 </td> <td> 147.85 </td> <td> 3.71 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200677_at </td> <td> 200677_at </td> <td> NM_004339 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004339.2 /DEF=Homo sapiens pituitary tumor-transforming 1 interacting protein (PTTG1IP), mRNA.  /FEA=mRNA /GEN=PTTG1IP /PROD=pituitary tumor-transforming protein1-interacting protein precursor /DB_XREF=gi:11038670 /UG=Hs.111126 pituitary tumor-transforming 1 interacting protein /FL=gb:NM_004339.2 gb:BC000415.1 gb:AF149785.1 </td> <td> NM_004339 </td> <td> pituitary tumor-transforming 1 interacting protein </td> <td> PTTG1IP </td> <td> 754 </td> <td> NM_001286822 /// NM_004339 /// NR_104597 </td> <td> 0006606 // protein import into nucleus // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004872 // receptor activity // inferred from electronic annotation </td> <td> -259.67 </td> <td> 1416.26 </td> <td> -3.71 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 220974_x_at </td> <td> 220974_x_at </td> <td> NM_030971 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030971.1 /DEF=Homo sapiens similar to rat tricarboxylate carrier-like protein (BA108L7.2), mRNA.  /FEA=mRNA /GEN=BA108L7.2 /PROD=similar to rat tricarboxylate carrier-likeprotein /DB_XREF=gi:13569945 /FL=gb:NM_030971.1 </td> <td> NM_030971 </td> <td> sideroflexin 3 </td> <td> SFXN3 </td> <td> 81855 </td> <td> NM_030971 /// XR_428720 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td> 0008324 // cation transmembrane transporter activity // inferred from electronic annotation </td> <td> 59.02 </td> <td> 118.74 </td> <td> 3.71 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202217_at </td> <td> 202217_at </td> <td> NM_004649 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004649.1 /DEF=Homo sapiens ES1 (zebrafish) protein, human homolog of (C21ORF33), mRNA.  /FEA=mRNA /GEN=C21ORF33 /PROD=ES1 (zebrafish) protein, human homolog of /DB_XREF=gi:5031690 /UG=Hs.182423 ES1 (zebrafish) protein, human homolog of /FL=gb:BC002370.1 gb:BC003587.1 gb:D86061.1 gb:U53003.1 gb:NM_004649.1 </td> <td> NM_004649 </td> <td> chromosome 21 open reading frame 33 </td> <td> C21orf33 </td> <td> 8209 </td> <td> NM_004649 /// NM_198155 /// XM_005261184 /// XM_005261185 /// XM_005261186 /// XM_006724055 /// XM_006724056 </td> <td>  </td> <td> 0005739 // mitochondrion // not recorded </td> <td>  </td> <td> 41.58 </td> <td> 145.21 </td> <td> 3.71 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209191_at </td> <td> 209191_at </td> <td> BC002654 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002654.1 /DEF=Homo sapiens, Similar to tubulin, beta, 4, clone MGC:4083, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to tubulin, beta, 4 /DB_XREF=gi:12803638 /UG=Hs.274398 Homo sapiens, Similar to tubulin, beta, 4, clone MGC:4083, mRNA, complete cds /FL=gb:BC002654.1 </td> <td> BC002654 </td> <td> tubulin, beta 6 class V </td> <td> TUBB6 </td> <td> 84617 </td> <td> NM_032525 /// XM_005258159 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 467.92 </td> <td> 1354.86 </td> <td> 3.70 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202959_at </td> <td> 202959_at </td> <td> AI433712 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI433712 /FEA=EST /DB_XREF=gi:4291098 /DB_XREF=est:ti88f08.x1 /CLONE=IMAGE:2139111 /UG=Hs.155212 methylmalonyl Coenzyme A mutase /FL=gb:M65131.1 gb:NM_000255.1 </td> <td> AI433712 </td> <td> methylmalonyl CoA mutase </td> <td> MUT </td> <td> 4594 </td> <td> NM_000255 /// XM_005249143 </td> <td> 0006635 // fatty acid beta-oxidation // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009235 // cobalamin metabolic process // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0019626 // short-chain fatty acid catabolic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050667 // homocysteine metabolic process // inferred from direct assay </td> <td> 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004494 // methylmalonyl-CoA mutase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016866 // intramolecular transferase activity // inferred from electronic annotation /// 0031419 // cobalamin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0072341 // modified amino acid binding // inferred from direct assay </td> <td> 31.75 </td> <td> 56.33 </td> <td> 3.70 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218478_s_at </td> <td> 218478_s_at </td> <td> NM_017612 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017612.1 /DEF=Homo sapiens hypothetical protein DKFZp434E2220 (DKFZp434E2220), mRNA.  /FEA=mRNA /GEN=DKFZp434E2220 /PROD=hypothetical protein DKFZp434E2220 /DB_XREF=gi:8922133 /UG=Hs.37706 hypothetical protein DKFZp434E2220 /FL=gb:NM_017612.1 </td> <td> NM_017612 </td> <td> zinc finger, CCHC domain containing 8 </td> <td> ZCCHC8 </td> <td> 55596 </td> <td> NM_017612 /// XM_005253581 /// XM_006719491 /// XM_006719492 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -98.50 </td> <td> 175.30 </td> <td> -3.70 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209743_s_at </td> <td> 209743_s_at </td> <td> AI989677 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI989677 /FEA=EST /DB_XREF=gi:5836558 /DB_XREF=est:ws35b04.x1 /CLONE=IMAGE:2499151 /UG=Hs.98074 atrophin-1 interacting protein 4 /FL=gb:AB056663.2 </td> <td> AI989677 </td> <td> itchy E3 ubiquitin protein ligase </td> <td> ITCH </td> <td> 83737 </td> <td> NM_001257137 /// NM_001257138 /// NM_031483 /// XM_005260570 /// XM_006723881 /// XM_006723882 /// XR_244153 /// XR_430315 </td> <td> 0000209 // protein polyubiquitination // inferred from electronic annotation /// 0001558 // regulation of cell growth // non-traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0002669 // positive regulation of T cell anergy // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0035519 // protein K29-linked ubiquitination // inferred from direct assay /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from sequence or structural similarity /// 0046642 // negative regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0046718 // viral entry into host cell // traceable author statement /// 0050687 // negative regulation of defense response to virus // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0090085 // regulation of protein deubiquitination // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // not recorded /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // non-traceable author statement /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0043021 // ribonucleoprotein complex binding // inferred from physical interaction /// 0045236 // CXCR chemokine receptor binding // inferred from physical interaction </td> <td> -38.73 </td> <td> 84.89 </td> <td> -3.70 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201441_at </td> <td> 201441_at </td> <td> NM_001863 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001863.2 /DEF=Homo sapiens cytochrome c oxidase subunit VIb (COX6B), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=COX6B /PROD=cytochrome c oxidase subunit VIb /DB_XREF=gi:6680989 /UG=Hs.174031 cytochrome c oxidase subunit VIb /FL=gb:BC001015.1 gb:BC002478.1 gb:NM_001863.2 </td> <td> NM_001863 </td> <td> cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous) </td> <td> COX6B1 </td> <td> 1340 </td> <td> NM_001863 </td> <td> 0021762 // substantia nigra development // inferred from expression pattern /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // non-traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // non-traceable author statement </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation </td> <td> 0004129 // cytochrome-c oxidase activity // non-traceable author statement </td> <td> 56.88 </td> <td> 404.99 </td> <td> 3.70 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 206102_at </td> <td> 206102_at </td> <td> NM_021067 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021067.1 /DEF=Homo sapiens KIAA0186 gene product (KIAA0186), mRNA. /FEA=mRNA /GEN=KIAA0186 /PROD=KIAA0186 gene product /DB_XREF=gi:10800147 /UG=Hs.36232 KIAA0186 gene product /FL=gb:NM_021067.1 gb:D80008.1 </td> <td> NM_021067 </td> <td> GINS complex subunit 1 (Psf1 homolog) </td> <td> GINS1 </td> <td> 9837 </td> <td> NM_021067 /// XM_005260896 /// XM_006723670 /// XR_244226 /// XR_244227 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0001833 // inner cell mass cell proliferation // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 47.43 </td> <td> 70.39 </td> <td> 3.70 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200721_s_at </td> <td> 200721_s_at </td> <td> NM_005736 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005736.2 /DEF=Homo sapiens ARP1 (actin-related protein 1, yeast) homolog A (centractin alpha) (ACTR1A), mRNA.  /FEA=mRNA /GEN=ACTR1A /PROD=actin-related protein 1A /DB_XREF=gi:13325058 /UG=Hs.153961 ARP1 (actin-related protein 1, yeast) homolog A (centractin alpha) /FL=gb:BC000693.1 gb:NM_005736.2 </td> <td> NM_005736 </td> <td> ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) </td> <td> ACTR1A </td> <td> 10121 </td> <td> NM_005736 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005869 // dynactin complex // traceable author statement /// 0005875 // microtubule associated complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> 98.88 </td> <td> 224.24 </td> <td> 3.70 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221311_x_at </td> <td> 221311_x_at </td> <td> NM_020466 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020466.1 /DEF=Homo sapiens hypothetical protein dJ122O8.2 (DJ122O8.2), mRNA. /FEA=CDS /GEN=DJ122O8.2 /PROD=hypothetical protein dJ122O8.2 /DB_XREF=gi:10092688 /UG=Hs.132094 hypothetical protein dJ122O8.2 /FL=gb:NM_020466.1 </td> <td> NM_020466 </td> <td> LYR motif containing 2 </td> <td> LYRM2 </td> <td> 57226 </td> <td> NM_020466 /// NR_028493 /// NR_028494 /// NR_028495 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation </td> <td>  </td> <td> 38.43 </td> <td> 52.04 </td> <td> 3.70 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 219973_at </td> <td> 219973_at </td> <td> NM_024590 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024590.1 /DEF=Homo sapiens hypothetical protein FLJ23548 (FLJ23548), mRNA. /FEA=mRNA /GEN=FLJ23548 /PROD=hypothetical protein FLJ23548 /DB_XREF=gi:13375780 /UG=Hs.22895 hypothetical protein FLJ23548 /FL=gb:NM_024590.1 </td> <td> NM_024590 </td> <td> arylsulfatase family, member J </td> <td> ARSJ </td> <td> 79642 </td> <td> NM_024590 /// XM_005263211 /// XM_005263212 /// XM_005263213 </td> <td> 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // traceable author statement /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 104.22 </td> <td> 156.44 </td> <td> 3.70 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202599_s_at </td> <td> 202599_s_at </td> <td> NM_003489 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003489.1 /DEF=Homo sapiens nuclear receptor interacting protein 1 (NRIP1), mRNA. /FEA=mRNA /GEN=NRIP1 /PROD=receptor interacting protein 140 /DB_XREF=gi:4505454 /UG=Hs.155017 nuclear receptor interacting protein 1 /FL=gb:NM_003489.1 </td> <td> NM_003489 </td> <td> nuclear receptor interacting protein 1 </td> <td> NRIP1 </td> <td> 8204 </td> <td> NM_003489 /// XM_005261063 /// XM_005261065 /// XM_005261066 /// XM_006724054 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001543 // ovarian follicle rupture // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0019915 // lipid storage // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0030728 // ovulation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay </td> <td> 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from physical interaction /// 0035257 // nuclear hormone receptor binding // inferred from physical interaction /// 0035259 // glucocorticoid receptor binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // non-traceable author statement </td> <td> -144.50 </td> <td> 219.50 </td> <td> -3.70 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204125_at </td> <td> 204125_at </td> <td> NM_016013 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016013.1 /DEF=Homo sapiens CGI-65 protein (LOC51103), mRNA. /FEA=mRNA /GEN=LOC51103 /PROD=CGI-65 protein /DB_XREF=gi:7705778 /UG=Hs.106529 CGI-65 protein /FL=gb:BC000780.1 gb:AF151823.1 gb:NM_016013.1 </td> <td> NM_016013 </td> <td> NADH dehydrogenase (ubiquinone) complex I, assembly factor 1 </td> <td> NDUFAF1 </td> <td> 51103 </td> <td> NM_016013 /// NR_045620 /// XM_006720555 /// XM_006720556 /// XM_006720557 /// XM_006720558 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006461 // protein complex assembly // non-traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // non-traceable author statement </td> <td> 37.75 </td> <td> 107.67 </td> <td> 3.69 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213465_s_at </td> <td> 213465_s_at </td> <td> BF718769 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF718769 /FEA=EST /DB_XREF=gi:12019514 /DB_XREF=est:KEST72 /CLONE=S90413.NIH-107-R.ab1 /UG=Hs.36587 protein phosphatase 1, regulatory subunit 7 </td> <td> BF718769 </td> <td> protein phosphatase 1, regulatory subunit 7 </td> <td> PPP1R7 </td> <td> 5510 </td> <td> NM_001282409 /// NM_001282410 /// NM_001282411 /// NM_001282412 /// NM_001282413 /// NM_001282414 /// NM_002712 </td> <td> 0035307 // positive regulation of protein dephosphorylation // inferred from mutant phenotype /// 0050790 // regulation of catalytic activity // non-traceable author statement /// 0050790 // regulation of catalytic activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008599 // protein phosphatase type 1 regulator activity // traceable author statement /// 0030234 // enzyme regulator activity // non-traceable author statement </td> <td> 47.33 </td> <td> 160.06 </td> <td> 3.69 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 215088_s_at </td> <td> 215088_s_at </td> <td> BG110532 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG110532 /FEA=EST /DB_XREF=gi:12604038 /DB_XREF=est:602278961F1 /CLONE=IMAGE:4366575 /UG=Hs.3577 succinate dehydrogenase complex, subunit C, integral membrane protein, 15kD </td> <td> BG110532 </td> <td> succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa </td> <td> SDHC </td> <td> 6391 </td> <td> NM_001035511 /// NM_001035512 /// NM_001035513 /// NM_001278172 /// NM_003001 /// NR_103459 </td> <td> 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0009060 // aerobic respiration // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement </td> <td> 0005739 // mitochondrion // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005749 // mitochondrial respiratory chain complex II // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0045273 // respiratory chain complex II // traceable author statement /// 0045281 // succinate dehydrogenase complex // inferred from electronic annotation </td> <td> 0000104 // succinate dehydrogenase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 46.77 </td> <td> 184.86 </td> <td> 3.69 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212898_at </td> <td> 212898_at </td> <td> AB007866 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB007866.2 /DEF=Homo sapiens mRNA for KIAA0406 protein, partial cds. /FEA=mRNA /GEN=KIAA0406 /PROD=KIAA0406 protein /DB_XREF=gi:6634030 /UG=Hs.158249 KIAA0406 gene product </td> <td> AB007866 </td> <td> TELO2 interacting protein 1 </td> <td> TTI1 </td> <td> 9675 </td> <td> NM_014657 /// XM_005260621 /// XR_244159 /// XR_244160 </td> <td> 0032006 // regulation of TOR signaling // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0031931 // TORC1 complex // inferred from direct assay /// 0031932 // TORC2 complex // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 45.60 </td> <td> 93.92 </td> <td> 3.69 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208178_x_at </td> <td> 208178_x_at </td> <td> NM_007118 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007118.1 /DEF=Homo sapiens triple functional domain (PTPRF interacting) (TRIO), mRNA.  /FEA=mRNA /GEN=TRIO /PROD=triple functional domain (PTPRF interacting) /DB_XREF=gi:6005921 /UG=Hs.171957 triple functional domain (PTPRF interacting) /FL=gb:U42390.1 gb:NM_007118.1 </td> <td> NM_007118 </td> <td> trio Rho guanine nucleotide exchange factor </td> <td> TRIO </td> <td> 7204 </td> <td> NM_007118 /// XM_006714495 /// XR_241714 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043087 // regulation of GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation </td> <td> -409.53 </td> <td> 431.84 </td> <td> -3.69 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212005_at </td> <td> 212005_at </td> <td> AL582808 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL582808 /FEA=EST /DB_XREF=gi:12951159 /DB_XREF=est:AL582808 /CLONE=CS0DL008YF05 (3 prime) /UG=Hs.226770 DKFZP566C0424 protein </td> <td> AL582808 </td> <td> SUZ RNA binding domain containing 1 </td> <td> SZRD1 </td> <td> 26099 </td> <td> NM_001114600 /// NM_001271869 /// NR_073500 /// NR_073501 /// NR_073502 /// NR_073503 </td> <td>  </td> <td>  </td> <td>  </td> <td> 53.32 </td> <td> 106.59 </td> <td> 3.69 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218314_s_at </td> <td> 218314_s_at </td> <td> NM_018195 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018195.1 /DEF=Homo sapiens hypothetical protein FLJ10726 (FLJ10726), mRNA. /FEA=mRNA /GEN=FLJ10726 /PROD=hypothetical protein FLJ10726 /DB_XREF=gi:8922622 /UG=Hs.268561 hypothetical protein FLJ10726 /FL=gb:NM_018195.1 </td> <td> NM_018195 </td> <td> chromosome 11 open reading frame 57 </td> <td> C11orf57 </td> <td> 55216 </td> <td> NM_001082969 /// NM_001082970 /// NM_018195 /// NR_103469 /// XM_006718873 /// XM_006718874 /// XM_006718875 /// XM_006718876 /// XM_006718877 </td> <td>  </td> <td>  </td> <td>  </td> <td> 34.08 </td> <td> 72.21 </td> <td> 3.69 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 206414_s_at </td> <td> 206414_s_at </td> <td> NM_003887 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003887.1 /DEF=Homo sapiens development and differentiation enhancing factor 2 (DDEF2), mRNA.  /FEA=mRNA /GEN=DDEF2 /PROD=ADP-ribosylation factorarf-directed GTPaseactivating protein /DB_XREF=gi:4502248 /UG=Hs.12802 development and differentiation enhancing factor 2 /FL=gb:AB007860.1 gb:NM_003887.1 </td> <td> NM_003887 </td> <td> ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 </td> <td> ASAP2 </td> <td> 8853 </td> <td> NM_001135191 /// NM_003887 /// XM_006711898 /// XM_006711899 /// XM_006711900 /// XM_006711901 /// XM_006711902 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0002043 // blood vessel endothelial cell proliferation involved in sprouting angiogenesis // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006933 // negative regulation of cell adhesion involved in substrate-bound cell migration // inferred from electronic annotation /// 0006933 // negative regulation of cell adhesion involved in substrate-bound cell migration // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from direct assay /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010764 // negative regulation of fibroblast migration // inferred from electronic annotation /// 0010764 // negative regulation of fibroblast migration // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from direct assay /// 0016477 // cell migration // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031214 // biomineral tissue development // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032148 // activation of protein kinase B activity // inferred from direct assay /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0033622 // integrin activation // inferred from electronic annotation /// 0033622 // integrin activation // inferred from sequence or structural similarity /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from electronic annotation /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from sequence or structural similarity /// 0035148 // tube formation // inferred from direct assay /// 0035556 // intracellular signal transduction // traceable author statement /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0043088 // regulation of Cdc42 GTPase activity // inferred from direct assay /// 0043113 // receptor clustering // inferred from electronic annotation /// 0043113 // receptor clustering // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0045747 // positive regulation of Notch signaling pathway // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050880 // regulation of blood vessel size // inferred from direct assay /// 0051451 // myoblast migration // inferred from electronic annotation /// 0051451 // myoblast migration // inferred from sequence or structural similarity /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from sequence or structural similarity /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from electronic annotation /// 0051895 // negative regulation of focal adhesion assembly // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling // inferred from direct assay /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0090051 // negative regulation of cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0090314 // positive regulation of protein targeting to membrane // inferred from electronic annotation /// 0090314 // positive regulation of protein targeting to membrane // inferred from sequence or structural similarity /// 0090315 // negative regulation of protein targeting to membrane // inferred from direct assay /// 1900025 // negative regulation of substrate adhesion-dependent cell spreading // inferred from direct assay /// 2001044 // regulation of integrin-mediated signaling pathway // inferred from electronic annotation /// 2001044 // regulation of integrin-mediated signaling pathway // inferred from sequence or structural similarity </td> <td> 0001726 // ruffle // inferred from direct assay /// 0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071944 // cell periphery // inferred from direct assay </td> <td> 0005092 // GDP-dissociation inhibitor activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from direct assay /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 47.98 </td> <td> 240.99 </td> <td> 3.69 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218915_at </td> <td> 218915_at </td> <td> NM_016418 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016418.1 /DEF=Homo sapiens clone FLB5214 (LOC51219), mRNA. /FEA=mRNA /GEN=LOC51219 /PROD=clone FLB5214 /DB_XREF=gi:9994194 /UG=Hs.5486 clone FLB5214 /FL=gb:AF113694.1 gb:NM_016418.1 </td> <td> NM_016418 </td> <td> neurofibromin 2 (merlin) </td> <td> NF2 </td> <td> 4771 </td> <td> NM_000268 /// NM_016418 /// NM_181825 /// NM_181826 /// NM_181827 /// NM_181828 /// NM_181829 /// NM_181830 /// NM_181831 /// NM_181832 /// NM_181833 /// NM_181834 /// NM_181835 </td> <td> 0001707 // mesoderm formation // inferred from electronic annotation /// 0001953 // negative regulation of cell-matrix adhesion // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007398 // ectoderm development // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0014010 // Schwann cell proliferation // inferred from mutant phenotype /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0030036 // actin cytoskeleton organization // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // traceable author statement /// 0035330 // regulation of hippo signaling // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042518 // negative regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0046426 // negative regulation of JAK-STAT cascade // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation </td> <td> 134.42 </td> <td> 183.81 </td> <td> 3.68 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202763_at </td> <td> 202763_at </td> <td> NM_004346 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004346.1 /DEF=Homo sapiens caspase 3, apoptosis-related cysteine protease (CASP3), mRNA.  /FEA=mRNA /GEN=CASP3 /PROD=caspase 3, apoptosis-related cysteine protease /DB_XREF=gi:4757911 /UG=Hs.74552 caspase 3, apoptosis-related cysteine protease /FL=gb:NM_004346.1 gb:U13737.1 gb:U13738.1 gb:U26943.1 </td> <td> NM_004346 </td> <td> caspase 3, apoptosis-related cysteine peptidase </td> <td> CASP3 </td> <td> 836 </td> <td> NM_004346 /// NM_032991 </td> <td> 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006508 // proteolysis // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from electronic annotation /// 0008631 // intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from electronic annotation /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // traceable author statement /// 0009411 // response to UV // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030182 // neuron differentiation // not recorded /// 0030198 // extracellular matrix organization // traceable author statement /// 0030216 // keratinocyte differentiation // not recorded /// 0030218 // erythrocyte differentiation // inferred from direct assay /// 0030218 // erythrocyte differentiation // traceable author statement /// 0030220 // platelet formation // traceable author statement /// 0030264 // nuclear fragmentation involved in apoptotic nuclear change // inferred from mutant phenotype /// 0030889 // negative regulation of B cell proliferation // inferred from electronic annotation /// 0034349 // glial cell apoptotic process // inferred from electronic annotation /// 0034612 // response to tumor necrosis factor // traceable author statement /// 0035329 // hippo signaling // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from genetic interaction /// 0043281 // regulation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from electronic annotation /// 0046007 // negative regulation of activated T cell proliferation // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 0097194 // execution phase of apoptosis // inferred from direct assay /// 0097194 // execution phase of apoptosis // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement </td> <td> 0004190 // aspartic-type endopeptidase activity // not recorded /// 0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004861 // cyclin-dependent protein serine/threonine kinase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0097153 // cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0097200 // cysteine-type endopeptidase activity involved in execution phase of apoptosis // inferred from mutant phenotype </td> <td> -51.00 </td> <td> 190.03 </td> <td> -3.68 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201394_s_at </td> <td> 201394_s_at </td> <td> U23946 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U23946.1 /DEF=Human putative tumor suppressor (LUCA15) mRNA, complete cds. /FEA=mRNA /GEN=LUCA15 /DB_XREF=gi:1244403 /UG=Hs.201675 RNA binding motif protein 5 /FL=gb:U23946.1 gb:BC002957.1 gb:AF091263.1 gb:NM_005778.1 </td> <td> U23946 </td> <td> RNA binding motif protein 5 </td> <td> RBM5 </td> <td> 10181 </td> <td> NM_005778 /// NR_036627 /// XM_006712917 /// XM_006712918 /// XM_006712919 /// XM_006712920 /// XR_427245 </td> <td> 0000245 // spliceosomal complex assembly // inferred from direct assay /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -49.43 </td> <td> 182.51 </td> <td> -3.68 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201381_x_at </td> <td> 201381_x_at </td> <td> AF057356 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF057356.1 /DEF=Homo sapiens calcyclin binding protein mRNA, complete cds. /FEA=mRNA /PROD=calcyclin binding protein /DB_XREF=gi:3063652 /UG=Hs.27258 calcyclin binding protein /FL=gb:AF314752.1 gb:AF057356.1 gb:NM_014412.1 </td> <td> AF057356 </td> <td> calcyclin binding protein </td> <td> CACYBP </td> <td> 27101 </td> <td> NM_001007214 /// NM_014412 /// XM_005245092 </td> <td> 0007507 // heart development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060416 // response to growth hormone // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005641 // nuclear envelope lumen // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0030877 // beta-catenin destruction complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> 111.23 </td> <td> 315.89 </td> <td> 3.68 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212656_at </td> <td> 212656_at </td> <td> AF110399 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF110399.1 /DEF=Homo sapiens elongation factor Ts mRNA, nuclear gene encoding mitochondrial protein, complete cds.  /FEA=CDS /PROD=elongation factor Ts /DB_XREF=gi:4416085 /UG=Hs.3273 Ts translation elongation factor, mitochondrial /FL=gb:AF110399.1 </td> <td> AF110399 </td> <td> Ts translation elongation factor, mitochondrial </td> <td> TSFM </td> <td> 10102 </td> <td> NM_001172695 /// NM_001172696 /// NM_001172697 /// NM_005726 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0032784 // regulation of DNA-templated transcription, elongation // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 41.27 </td> <td> 109.46 </td> <td> 3.68 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204147_s_at </td> <td> 204147_s_at </td> <td> NM_007111 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007111.1 /DEF=Homo sapiens transcription factor Dp-1 (TFDP1), mRNA. /FEA=mRNA /GEN=TFDP1 /PROD=transcription factor Dp-1 /DB_XREF=gi:6005899 /UG=Hs.279576 transcription factor Dp-1 /FL=gb:L23959.1 gb:NM_007111.1 </td> <td> NM_007111 </td> <td> transcription factor Dp-1 </td> <td> TFDP1 </td> <td> 7027 </td> <td> NM_007111 /// NR_026580 /// XM_005268326 /// XM_005268327 /// XM_005268328 /// XM_005268330 /// XM_005268331 /// XM_006719977 /// XM_006719978 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction </td> <td> 44.30 </td> <td> 73.38 </td> <td> 3.68 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 215548_s_at </td> <td> 215548_s_at </td> <td> AB020724 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB020724.1 /DEF=Homo sapiens mRNA for KIAA0917 protein, partial cds. /FEA=mRNA /GEN=KIAA0917 /PROD=KIAA0917 protein /DB_XREF=gi:4240322 /UG=Hs.27023 vesicle transport-related protein </td> <td> AB020724 </td> <td> sec1 family domain containing 1 </td> <td> SCFD1 </td> <td> 23256 </td> <td> NM_001257376 /// NM_001283031 /// NM_001283032 /// NM_001283033 /// NM_016106 /// NM_182835 /// XM_005267469 /// XR_429299 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from sequence or structural similarity /// 0006892 // post-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0009636 // response to toxic substance // inferred from expression pattern /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0060628 // regulation of ER to Golgi vesicle-mediated transport // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005798 // Golgi-associated vesicle // inferred from sequence or structural similarity /// 0005801 // cis-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from sequence or structural similarity /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019905 // syntaxin binding // inferred from sequence or structural similarity /// 0047485 // protein N-terminus binding // inferred from electronic annotation </td> <td> 53.93 </td> <td> 134.74 </td> <td> 3.68 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203550_s_at </td> <td> 203550_s_at </td> <td> NM_006589 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006589.1 /DEF=Homo sapiens chromosome 1 open reading frame 2 (C1ORF2), mRNA. /FEA=mRNA /GEN=C1ORF2 /PROD=chromosome 1 open reading frame 2 /DB_XREF=gi:5729751 /UG=Hs.19554 chromosome 1 open reading frame 2 /FL=gb:NM_006589.1 </td> <td> NM_006589 </td> <td> family with sequence similarity 189, member B </td> <td> FAM189B </td> <td> 10712 </td> <td> NM_001267608 /// NM_006589 /// NM_198264 /// XM_005244845 /// XM_005244847 /// XM_005244848 /// XM_005276738 /// XM_005276740 /// XM_005276741 /// XM_006711126 /// XM_006711127 /// XM_006726209 /// XM_006726210 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0050699 // WW domain binding // inferred from physical interaction </td> <td> 81.23 </td> <td> 164.41 </td> <td> 3.68 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 211668_s_at </td> <td> 211668_s_at </td> <td> K03226 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:K03226.1 /DEF=Human preprourokinase mRNA, complete cds. /FEA=mRNA /GEN=PLAU /DB_XREF=gi:340155 /FL=gb:K03226.1 </td> <td> K03226 </td> <td> plasminogen activator, urokinase </td> <td> PLAU </td> <td> 5328 </td> <td> NM_001145031 /// NM_002658 /// XM_006717893 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006935 // chemotaxis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from direct assay /// 0014909 // smooth muscle cell migration // inferred from electronic annotation /// 0014910 // regulation of smooth muscle cell migration // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042730 // fibrinolysis // traceable author statement /// 0061041 // regulation of wound healing // inferred by curator /// 2000097 // regulation of smooth muscle cell-matrix adhesion // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -53.27 </td> <td> 128.91 </td> <td> -3.68 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200740_s_at </td> <td> 200740_s_at </td> <td> NM_006936 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006936.1 /DEF=Homo sapiens SMT3 (suppressor of mif two 3, yeast) homolog 1 (SMT3H1), mRNA.  /FEA=mRNA /GEN=SMT3H1 /PROD=SMT3 (suppressor of mif two 3, yeast) homolog 1 /DB_XREF=gi:5902095 /UG=Hs.85119 SMT3 (suppressor of mif two 3, yeast) homolog 1 /FL=gb:BC000036.1 gb:NM_006936.1 </td> <td> NM_006936 </td> <td> small ubiquitin-like modifier 3 </td> <td> SUMO3 </td> <td> 6612 </td> <td> NM_001286416 /// NM_006936 </td> <td> 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // traceable author statement /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 2000060 // positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from electronic annotation </td> <td> 0000776 // kinetochore // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019789 // SUMO ligase activity // inferred from electronic annotation </td> <td> 128.13 </td> <td> 606.21 </td> <td> 3.68 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203208_s_at </td> <td> 203208_s_at </td> <td> NM_014637 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014637.1 /DEF=Homo sapiens KIAA0009 gene product (KIAA0009), mRNA. /FEA=mRNA /GEN=KIAA0009 /PROD=KIAA0009 gene product /DB_XREF=gi:7661853 /UG=Hs.170198 KIAA0009 gene product /FL=gb:D13634.1 gb:NM_014637.1 </td> <td> NM_014637 </td> <td> mitochondrial fission regulator 1 </td> <td> MTFR1 </td> <td> 9650 </td> <td> NM_001145838 /// NM_001145839 /// NM_014637 /// XM_005251327 /// XM_006716484 </td> <td> 0000266 // mitochondrial fission // inferred from sequence or structural similarity /// 0007005 // mitochondrion organization // inferred from sequence or structural similarity /// 0009060 // aerobic respiration // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay </td> <td>  </td> <td> 57.50 </td> <td> 126.80 </td> <td> 3.68 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208783_s_at </td> <td> 208783_s_at </td> <td> AL570661 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL570661 /FEA=EST /DB_XREF=gi:12927188 /DB_XREF=est:AL570661 /CLONE=CS0DI021YG18 (3 prime) /UG=Hs.83532 membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen) /FL=gb:M58050.1 </td> <td> AL570661 </td> <td> CD46 molecule, complement regulatory protein </td> <td> CD46 </td> <td> 4179 </td> <td> NM_002389 /// NM_153826 /// NM_172350 /// NM_172351 /// NM_172352 /// NM_172353 /// NM_172354 /// NM_172355 /// NM_172356 /// NM_172357 /// NM_172358 /// NM_172359 /// NM_172360 /// NM_172361 </td> <td> 0002250 // adaptive immune response // inferred by curator /// 0002376 // immune system process // inferred from electronic annotation /// 0002456 // T cell mediated immunity // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation /// 0008593 // regulation of Notch signaling pathway // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0032613 // interleukin-10 production // inferred from direct assay /// 0032733 // positive regulation of interleukin-10 production // inferred from direct assay /// 0035581 // sequestering of extracellular ligand from receptor // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0043382 // positive regulation of memory T cell differentiation // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045591 // positive regulation of regulatory T cell differentiation // inferred from direct assay /// 0045916 // negative regulation of complement activation // inferred from electronic annotation /// 0071636 // positive regulation of transforming growth factor beta production // inferred from direct assay </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0002079 // inner acrosomal membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001848 // complement binding // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from physical interaction </td> <td> 68.97 </td> <td> 295.66 </td> <td> 3.67 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 220607_x_at </td> <td> 220607_x_at </td> <td> NM_016397 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016397.1 /DEF=Homo sapiens TH1 drosophila homolog (HSPC130), mRNA. /FEA=mRNA /GEN=HSPC130 /PROD=TH1 drosophila homolog /DB_XREF=gi:7705462 /UG=Hs.5184 TH1 drosophila homolog /FL=gb:AF161479.1 gb:NM_016397.1 </td> <td> NM_016397 </td> <td> negative elongation factor complex member C/D </td> <td> NELFCD </td> <td> 51497 </td> <td> NM_016397 /// NM_198976 /// XR_244142 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0032021 // NELF complex // inferred from direct assay </td> <td> 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 51.03 </td> <td> 342.41 </td> <td> 3.67 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 217196_s_at </td> <td> 217196_s_at </td> <td> AL110158 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL110158.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586F0424 (from clone DKFZp586F0424); partial cds.  /FEA=mRNA /GEN=DKFZp586F0424 /PROD=hypothetical protein /DB_XREF=gi:5817061 /UG=Hs.23585 KIAA1078 protein </td> <td> AL110158 </td> <td> calmodulin regulated spectrin-associated protein family, member 2 </td> <td> CAMSAP2 </td> <td> 23271 </td> <td> NM_203459 /// XM_005245040 /// XM_005245041 /// XM_005245042 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0033043 // regulation of organelle organization // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0051011 // microtubule minus-end binding // inferred from direct assay </td> <td> -48.80 </td> <td> 167.25 </td> <td> -3.67 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 210648_x_at </td> <td> 210648_x_at </td> <td> AB047360 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB047360.1 /DEF=Homo sapiens SNX 3A mRNA for sorting nexin 3A, complete cds. /FEA=mRNA /GEN=SNX 3A /PROD=sorting nexin 3A /DB_XREF=gi:12957159 /UG=Hs.12102 sorting nexin 3 /FL=gb:AB047360.1 </td> <td> AB047360 </td> <td> sorting nexin 3 </td> <td> SNX3 </td> <td> 8724 </td> <td> NM_003795 /// NM_152827 /// NM_152828 /// XM_005267192 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // not recorded /// 0006897 // endocytosis // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0042541 // hemoglobin biosynthetic process // not recorded </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation </td> <td> 136.65 </td> <td> 1174.78 </td> <td> 3.67 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221570_s_at </td> <td> 221570_s_at </td> <td> AF201938 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF201938.1 /DEF=Homo sapiens DC3 (DC3) mRNA, complete cds. /FEA=mRNA /GEN=DC3 /PROD=DC3 /DB_XREF=gi:9295179 /UG=Hs.273063 HSPC133 protein /FL=gb:AF201938.1 </td> <td> AF201938 </td> <td> methyltransferase like 5 </td> <td> METTL5 </td> <td> 29081 </td> <td> NM_001293186 /// NM_001293187 /// NM_014168 /// XM_005246478 /// XM_005246479 /// XM_006712458 </td> <td> 0001510 // RNA methylation // inferred from electronic annotation /// 0006479 // protein methylation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009452 // 7-methylguanosine RNA capping // inferred from electronic annotation /// 0031167 // rRNA methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 47.70 </td> <td> 258.95 </td> <td> 3.67 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209882_at </td> <td> 209882_at </td> <td> AF084462 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF084462.1 /DEF=Homo sapiens GTP-binding protein ROC1 (ROC1) mRNA, complete cds. /FEA=mRNA /GEN=ROC1 /PROD=GTP-binding protein ROC1 /DB_XREF=gi:4234917 /UG=Hs.96038 Ric (Drosophila)-like, expressed in many tissues /FL=gb:U71203.1 gb:U78165.1 gb:AF084462.1 gb:NM_006912.1 </td> <td> AF084462 </td> <td> Ras-like without CAAX 1 </td> <td> RIT1 </td> <td> 6016 </td> <td> NM_001256820 /// NM_001256821 /// NM_006912 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> -65.73 </td> <td> 196.01 </td> <td> -3.67 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221496_s_at </td> <td> 221496_s_at </td> <td> D64109 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D64109.1 /DEF=Homo sapiens mRNA for tob family, complete cds. /FEA=mRNA /PROD=tob family /DB_XREF=gi:1469154 /UG=Hs.4994 transducer of ERBB2, 2 /FL=gb:D64109.1 gb:AB035207.1 gb:NM_016272.1 </td> <td> D64109 </td> <td> transducer of ERBB2, 2 </td> <td> TOB2 </td> <td> 10766 </td> <td> NM_016272 /// XM_005261315 /// XM_006724105 </td> <td> 0007292 // female gamete generation // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0045671 // negative regulation of osteoclast differentiation // inferred from electronic annotation /// 0045778 // positive regulation of ossification // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042809 // vitamin D receptor binding // inferred from electronic annotation </td> <td> -46.92 </td> <td> 50.84 </td> <td> -3.67 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 222021_x_at </td> <td> 222021_x_at </td> <td> AI348006 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI348006 /FEA=EST /DB_XREF=gi:4085212 /DB_XREF=est:qp61b05.x1 /CLONE=IMAGE:1927473 /UG=Hs.469 succinate dehydrogenase complex, subunit A, flavoprotein (Fp) </td> <td> AI348006 </td> <td> succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1 /// succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2 </td> <td> SDHAP1 /// SDHAP2 </td> <td> 255812 /// 727956 </td> <td> NR_003264 /// NR_003265 </td> <td> 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td>  </td> <td> 0016491 // oxidoreductase activity // inferred from electronic annotation </td> <td> 77.52 </td> <td> 353.41 </td> <td> 3.67 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212476_at </td> <td> 212476_at </td> <td> D26069 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D26069.1 /DEF=Human mRNA for KIAA0041 gene, partial cds. /FEA=mRNA /GEN=KIAA0041 /DB_XREF=gi:436227 /UG=Hs.24340 centaurin beta2 </td> <td> D26069 </td> <td> ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 </td> <td> ACAP2 </td> <td> 23527 </td> <td> NM_012287 /// XM_006713557 /// XM_006713558 </td> <td> 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0036010 // protein localization to endosome // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 1990090 // cellular response to nerve growth factor stimulus // inferred from sequence or structural similarity </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 42.45 </td> <td> 73.42 </td> <td> 3.67 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201695_s_at </td> <td> 201695_s_at </td> <td> NM_000270 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000270.1 /DEF=Homo sapiens nucleoside phosphorylase (NP), mRNA. /FEA=mRNA /GEN=NP /PROD=purine nucleoside phosphorylase /DB_XREF=gi:4557800 /UG=Hs.75514 nucleoside phosphorylase /FL=gb:NM_000270.1 </td> <td> NM_000270 </td> <td> purine nucleoside phosphorylase </td> <td> PNP </td> <td> 4860 </td> <td> NM_000270 </td> <td> 0006139 // nucleobase-containing compound metabolic process // inferred from direct assay /// 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006148 // inosine catabolic process // inferred from direct assay /// 0006195 // purine nucleotide catabolic process // traceable author statement /// 0006738 // nicotinamide riboside catabolic process // inferred from direct assay /// 0006955 // immune response // inferred from mutant phenotype /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0034356 // NAD biosynthesis via nicotinamide riboside salvage pathway // inferred from genetic interaction /// 0034418 // urate biosynthetic process // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042493 // response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from mutant phenotype /// 0043101 // purine-containing compound salvage // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046638 // positive regulation of alpha-beta T cell differentiation // inferred from direct assay /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0070970 // interleukin-2 secretion // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001882 // nucleoside binding // inferred from direct assay /// 0002060 // purine nucleobase binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004731 // purine-nucleoside phosphorylase activity // not recorded /// 0004731 // purine-nucleoside phosphorylase activity // inferred from direct assay /// 0008144 // drug binding // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016763 // transferase activity, transferring pentosyl groups // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from direct assay </td> <td> 164.60 </td> <td> 548.27 </td> <td> 3.67 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201752_s_at </td> <td> 201752_s_at </td> <td> AI763123 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI763123 /FEA=EST /DB_XREF=gi:5178790 /DB_XREF=est:wi06f09.x1 /CLONE=IMAGE:2389481 /UG=Hs.324470 adducin 3 (gamma) /FL=gb:D67031.1 gb:NM_019903.1 </td> <td> AI763123 </td> <td> adducin 3 (gamma) </td> <td> ADD3 </td> <td> 120 </td> <td> NM_001121 /// NM_016824 /// NM_019903 /// XM_005269529 /// XM_005269530 /// XM_005269531 /// XM_005269533 /// XM_005269534 /// XM_005269535 /// XM_006717626 /// XM_006717627 /// XM_006717628 /// XM_006717629 </td> <td>  </td> <td> 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // traceable author statement </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation </td> <td> -54.90 </td> <td> 240.95 </td> <td> -3.67 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204079_at </td> <td> 204079_at </td> <td> NM_003595 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003595.1 /DEF=Homo sapiens tyrosylprotein sulfotransferase 2 (TPST2), mRNA. /FEA=mRNA /GEN=TPST2 /PROD=tyrosylprotein sulfotransferase 2 /DB_XREF=gi:4507666 /UG=Hs.26350 tyrosylprotein sulfotransferase 2 /FL=gb:AL136623.1 gb:BC001057.1 gb:AF061254.1 gb:AF049891.1 gb:NM_003595.1 </td> <td> NM_003595 </td> <td> tyrosylprotein sulfotransferase 2 </td> <td> TPST2 </td> <td> 8459 </td> <td> NM_001008566 /// NM_003595 /// XM_006724338 </td> <td> 0006478 // peptidyl-tyrosine sulfation // inferred from electronic annotation /// 0007342 // fusion of sperm to egg plasma membrane // inferred from electronic annotation /// 0060468 // prevention of polyspermy // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0008476 // protein-tyrosine sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 37.98 </td> <td> 85.11 </td> <td> 3.66 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 217294_s_at </td> <td> 217294_s_at </td> <td> U88968 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U88968.1 /DEF=Human alpha enolase like 1 (ENO1L1) mRNA, partial cds. /FEA=mRNA /GEN=ENO1L1 /PROD=alpha enolase like 1 /DB_XREF=gi:3282242 /UG=Hs.254105 enolase 1, (alpha) </td> <td> U88968 </td> <td> enolase 1, (alpha) </td> <td> ENO1 </td> <td> 2023 </td> <td> NM_001201483 /// NM_001428 /// XM_006710433 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0000015 // phosphopyruvate hydratase complex // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031305 // integral component of mitochondrial inner membrane // inferred from electronic annotation /// 0031430 // M band // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0004634 // phosphopyruvate hydratase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016829 // lyase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -450.38 </td> <td> 1217.29 </td> <td> -3.66 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218106_s_at </td> <td> 218106_s_at </td> <td> NM_018141 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018141.1 /DEF=Homo sapiens hypothetical protein FLJ10567 (FLJ10567), mRNA. /FEA=mRNA /GEN=FLJ10567 /PROD=hypothetical protein FLJ10567 /DB_XREF=gi:8922522 /UG=Hs.28444 hypothetical protein FLJ10567 /FL=gb:AF113220.1 gb:NM_018141.1 </td> <td> NM_018141 </td> <td> mitochondrial ribosomal protein S10 </td> <td> MRPS10 </td> <td> 55173 </td> <td> NM_018141 /// XM_005249206 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td>  </td> <td> 38.07 </td> <td> 162.69 </td> <td> 3.66 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213599_at </td> <td> 213599_at </td> <td> BE045993 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE045993 /FEA=EST /DB_XREF=gi:8363046 /DB_XREF=est:hd91c08.x4 /CLONE=IMAGE:2916878 /UG=Hs.116206 Opa-interacting protein 5 </td> <td> BE045993 </td> <td> Opa interacting protein 5 </td> <td> OIP5 </td> <td> 11339 </td> <td> NM_007280 </td> <td> 0006334 // nucleosome assembly // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007154 // cell communication // non-traceable author statement /// 0034080 // centromere-specific nucleosome assembly // traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0010369 // chromocenter // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 32.73 </td> <td> 61.49 </td> <td> 3.65 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203092_at </td> <td> 203092_at </td> <td> AF026030 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF026030.1 /DEF=Homo sapiens putative mitochondrial inner membrane protein import receptor (hTIM44) mRNA, nuclear gene encoding mitochondrial protein, complete cds.  /FEA=mRNA /GEN=hTIM44 /PROD=putative mitochondrial inner membrane proteinimport receptor /DB_XREF=gi:4103601 /UG=Hs.123178 translocase of inner mitochondrial membrane 44 (yeast) homolog /FL=gb:AF026030.1 gb:NM_006351.1 </td> <td> AF026030 </td> <td> translocase of inner mitochondrial membrane 44 homolog (yeast) </td> <td> TIMM44 </td> <td> 10469 </td> <td> NM_006351 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071806 // protein transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation </td> <td> -33.80 </td> <td> 33.23 </td> <td> -3.65 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200683_s_at </td> <td> 200683_s_at </td> <td> BE964689 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE964689 /FEA=EST /DB_XREF=gi:11768267 /DB_XREF=est:601658226R1 /CLONE=IMAGE:3885630 /UG=Hs.108104 ubiquitin-conjugating enzyme E2L 3 /FL=gb:NM_003347.1 </td> <td> BE964689 </td> <td> ubiquitin-conjugating enzyme E2L 3 </td> <td> UBE2L3 </td> <td> 7332 </td> <td> NM_001256355 /// NM_001256356 /// NM_003347 /// NM_198157 /// NR_028436 /// NR_046082 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0071383 // cellular response to steroid hormone stimulus // inferred from mutant phenotype /// 0071385 // cellular response to glucocorticoid stimulus // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 59.80 </td> <td> 290.73 </td> <td> 3.65 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203553_s_at </td> <td> 203553_s_at </td> <td> NM_006575 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006575.1 /DEF=Homo sapiens mitogen-activated protein kinase kinase kinase kinase 5 (MAP4K5), mRNA.  /FEA=mRNA /GEN=MAP4K5 /PROD=mitogen-activated protein kinase kinase kinasekinase /DB_XREF=gi:5729890 /UG=Hs.246970 mitogen-activated protein kinase kinase kinase kinase 5 /FL=gb:U77129.1 gb:NM_006575.1 </td> <td> NM_006575 </td> <td> mitogen-activated protein kinase kinase kinase kinase 5 </td> <td> MAP4K5 </td> <td> 11183 </td> <td> NM_006575 /// NM_198794 /// XM_006720013 /// XM_006720014 </td> <td> 0000165 // MAPK cascade //  /// 0000185 // activation of MAPKKK activity //  /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008349 // MAP kinase kinase kinase kinase activity //  /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -87.38 </td> <td> 196.86 </td> <td> -3.65 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 219235_s_at </td> <td> 219235_s_at </td> <td> NM_023923 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_023923.1 /DEF=Homo sapiens hypothetical protein FLJ13171 (FLJ13171), mRNA. /FEA=mRNA /GEN=FLJ13171 /PROD=hypothetical protein FLJ13171 /DB_XREF=gi:12965188 /UG=Hs.225641 hypothetical protein FLJ13171 /FL=gb:AF130081.1 gb:NM_023923.1 </td> <td> NM_023923 </td> <td> phosphatase and actin regulator 4 </td> <td> PHACTR4 </td> <td> 65979 </td> <td> NM_001048183 /// NM_023923 /// XM_005245970 /// XM_006710842 /// XM_006710843 /// XM_006710844 /// XM_006710845 /// XM_006710846 /// XM_006710847 /// XM_006710848 /// XM_006710849 /// XM_006710850 /// XM_006710851 /// XM_006710852 </td> <td> 0001755 // neural crest cell migration // inferred from sequence or structural similarity /// 0001843 // neural tube closure // inferred from sequence or structural similarity /// 0007266 // Rho protein signal transduction // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0043085 // positive regulation of catalytic activity // inferred from sequence or structural similarity /// 0048484 // enteric nervous system development // inferred from sequence or structural similarity /// 0051726 // regulation of cell cycle // inferred from sequence or structural similarity /// 0061386 // closure of optic fissure // inferred from sequence or structural similarity /// 2001045 // negative regulation of integrin-mediated signaling pathway // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from sequence or structural similarity /// 0008157 // protein phosphatase 1 binding // inferred from sequence or structural similarity /// 0071862 // protein phosphatase type 1 activator activity // inferred from sequence or structural similarity </td> <td> 38.25 </td> <td> 146.15 </td> <td> 3.65 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209684_at </td> <td> 209684_at </td> <td> AL136924 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136924.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586G2120 (from clone DKFZp586G2120); complete cds.  /FEA=mRNA /GEN=DKFZp586G2120 /PROD=hypothetical protein /DB_XREF=gi:12053342 /UG=Hs.62349 ras association (RalGDSAF-6) domain containing protein JC265 /FL=gb:AL136924.1 </td> <td> AL136924 </td> <td> Ras and Rab interactor 2 </td> <td> RIN2 </td> <td> 54453 </td> <td> NM_001242581 /// NM_018993 /// XM_005260730 /// XM_005260731 /// XM_005260732 /// XM_005260733 /// XM_006723573 /// XM_006723574 /// XM_006723575 /// XM_006723576 /// XM_006723577 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // non-traceable author statement /// 0032313 // regulation of Rab GTPase activity // non-traceable author statement /// 0032851 // positive regulation of Rab GTPase activity // non-traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // non-traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005083 // small GTPase regulator activity // non-traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0017112 // Rab guanyl-nucleotide exchange factor activity // non-traceable author statement </td> <td> -212.53 </td> <td> 452.79 </td> <td> -3.65 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203663_s_at </td> <td> 203663_s_at </td> <td> NM_004255 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004255.1 /DEF=Homo sapiens cytochrome c oxidase subunit Va (COX5A), mRNA. /FEA=mRNA /GEN=COX5A /PROD=cytochrome c oxidase subunit Va /DB_XREF=gi:4758037 /UG=Hs.181028 cytochrome c oxidase subunit Va /FL=gb:NM_004255.1 gb:M22760.1 </td> <td> NM_004255 </td> <td> cytochrome c oxidase subunit Va </td> <td> COX5A </td> <td> 9377 </td> <td> NM_004255 </td> <td> 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 104.15 </td> <td> 678.73 </td> <td> 3.64 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204969_s_at </td> <td> 204969_s_at </td> <td> NM_002906 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002906.1 /DEF=Homo sapiens radixin (RDX), mRNA. /FEA=mRNA /GEN=RDX /PROD=radixin /DB_XREF=gi:4506466 /UG=Hs.250613 radixin /FL=gb:L02320.1 gb:NM_002906.1 </td> <td> NM_002906 </td> <td> radixin </td> <td> RDX </td> <td> 5962 </td> <td> NM_001260492 /// NM_001260493 /// NM_001260494 /// NM_001260495 /// NM_001260496 /// NM_002906 </td> <td> 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from genetic interaction /// 0030033 // microvillus assembly // inferred from electronic annotation /// 0045176 // apical protein localization // inferred from electronic annotation /// 0051693 // actin filament capping // inferred from electronic annotation /// 0061028 // establishment of endothelial barrier // inferred from genetic interaction </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005902 // microvillus // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032420 // stereocilium // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0051286 // cell tip // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -35.90 </td> <td> 75.28 </td> <td> -3.64 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200651_at </td> <td> 200651_at </td> <td> NM_006098 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006098.1 /DEF=Homo sapiens guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 (GNB2L1), mRNA.  /FEA=mRNA /GEN=GNB2L1 /PROD=guanine nucleotide binding protein (G protein),beta polypeptide 2-like 1 /DB_XREF=gi:5174446 /UG=Hs.5662 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 /FL=gb:BC000214.1 gb:BC000366.1 gb:BC000672.1 gb:M24194.1 gb:NM_006098.1 </td> <td> NM_006098 </td> <td> guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 /// small nucleolar RNA, C/D box 95 /// small nucleolar RNA, C/D box 96A </td> <td> GNB2L1 /// SNORD95 /// SNORD96A </td> <td> 10399 /// 619570 /// 619571 </td> <td> NM_006098 /// NR_002591 /// NR_002592 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030822 // positive regulation of cAMP catabolic process // inferred from mutant phenotype /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from mutant phenotype /// 0032880 // regulation of protein localization // inferred from sequence or structural similarity /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation /// 0050765 // negative regulation of phagocytosis // inferred from mutant phenotype /// 0051302 // regulation of cell division // inferred from sequence or structural similarity /// 0051343 // positive regulation of cyclic-nucleotide phosphodiesterase activity // inferred from mutant phenotype /// 0051726 // regulation of cell cycle // inferred from direct assay /// 0051898 // negative regulation of protein kinase B signaling // inferred from mutant phenotype /// 0051901 // positive regulation of mitochondrial depolarization // inferred from mutant phenotype /// 0061099 // negative regulation of protein tyrosine kinase activity // inferred from direct assay /// 0090003 // regulation of establishment of protein localization to plasma membrane // inferred from electronic annotation /// 1901299 // negative regulation of hydrogen peroxide-mediated programmed cell death // inferred from genetic interaction /// 2000114 // regulation of establishment of cell polarity // inferred from sequence or structural similarity /// 2000543 // positive regulation of gastrulation // inferred from sequence or structural similarity /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0001891 // phagocytic cup // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005829 // cytosol // inferred from mutant phenotype /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030496 // midbody // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043204 // perikaryon // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005080 // protein kinase C binding // inferred from direct assay /// 0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008200 // ion channel inhibitor activity // inferred from sequence or structural similarity /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from mutant phenotype /// 0019899 // enzyme binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0030292 // protein tyrosine kinase inhibitor activity // inferred from direct assay /// 0030971 // receptor tyrosine kinase binding // inferred from direct assay /// 0032947 // protein complex scaffold // traceable author statement /// 0042169 // SH2 domain binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -934.25 </td> <td> 3248.12 </td> <td> -3.64 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201077_s_at </td> <td> 201077_s_at </td> <td> AF155235 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF155235.1 /DEF=Homo sapiens 15.5 kD RNA binding protein mRNA, complete cds. /FEA=mRNA /PROD=15.5 kD RNA binding protein /DB_XREF=gi:6318598 /UG=Hs.182255 non-histone chromosome protein 2 (S. cerevisiae)-like 1 /FL=gb:BC005358.1 gb:D50420.1 gb:AF091076.1 gb:NM_005008.1 gb:AF155235.1 </td> <td> AF155235 </td> <td> annexin A2 /// NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) </td> <td> ANXA2 /// NHP2L1 </td> <td> 302 /// 4809 </td> <td> NM_001002857 /// NM_001002858 /// NM_001003796 /// NM_001136015 /// NM_004039 /// NM_005008 /// XM_005261620 /// XM_006724258 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001525 // angiogenesis // inferred from expression pattern /// 0001765 // membrane raft assembly // inferred from mutant phenotype /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006900 // membrane budding // inferred from mutant phenotype /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0031340 // positive regulation of vesicle fusion // inferred from direct assay /// 0036035 // osteoclast development // inferred from direct assay /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042730 // fibrinolysis // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0051099 // positive regulation of binding // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from direct assay /// 0071229 // cellular response to acid // inferred from electronic annotation /// 0072661 // protein targeting to plasma membrane // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019897 // extrinsic component of plasma membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031428 // box C/D snoRNP complex // non-traceable author statement /// 0031902 // late endosome membrane // inferred from direct assay /// 0031982 // vesicle // inferred from electronic annotation /// 0035749 // myelin sheath adaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044354 // macropinosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from mutant phenotype /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0019834 // phospholipase A2 inhibitor activity // inferred from direct assay /// 0030515 // snoRNA binding // inferred from direct assay /// 0044548 // S100 protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> -91.05 </td> <td> 684.17 </td> <td> -3.64 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209153_s_at </td> <td> 209153_s_at </td> <td> M31523 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M31523.1 /DEF=Human transcription factor (E2A) mRNA, complete cds. /FEA=mRNA /GEN=TCF3 /DB_XREF=gi:339477 /UG=Hs.101047 transcription factor 3 (E2A immunoglobulin enhancer binding factors E12E47) /FL=gb:M31523.1 </td> <td> M31523 </td> <td> transcription factor 3 </td> <td> TCF3 </td> <td> 6929 </td> <td> NM_001136139 /// NM_003200 /// XM_005259620 /// XM_006722852 /// XM_006722853 /// XM_006722854 /// XM_006722855 /// XM_006722856 /// XM_006722857 /// XM_006722858 /// XM_006722859 /// XM_006722860 /// XM_006722861 /// XM_006722862 /// XM_006722863 /// XR_430150 /// XR_430151 /// XR_430152 /// XR_430153 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from direct assay /// 0002326 // B cell lineage commitment // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030098 // lymphocyte differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030183 // B cell differentiation // non-traceable author statement /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043966 // histone H3 acetylation // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048468 // cell development // inferred from electronic annotation /// 0048541 // Peyer's patch development // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 2000045 // regulation of G1/S transition of mitotic cell cycle // inferred from direct assay </td> <td> 0000788 // nuclear nucleosome // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from physical interaction /// 0035326 // enhancer binding // inferred by curator /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction /// 0070644 // vitamin D response element binding // inferred from direct assay /// 0070888 // E-box binding // inferred from direct assay /// 0070888 // E-box binding // inferred from sequence or structural similarity </td> <td> 68.22 </td> <td> 111.19 </td> <td> 3.64 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 211529_x_at </td> <td> 211529_x_at </td> <td> M90684 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M90684.1 /DEF=Human lymphocyte antigen (HLA-G2.1) mRNA, complete cds. /FEA=mRNA /GEN=HLA-G /PROD=b2 microglobulin /DB_XREF=gi:188467 /UG=Hs.73885 HLA-G histocompatibility antigen, class I, G /FL=gb:M90684.1 </td> <td> M90684 </td> <td> major histocompatibility complex, class I, G </td> <td> HLA-G </td> <td> 3135 </td> <td> NM_002127 /// XM_006715080 /// XM_006725041 /// XM_006725700 /// XM_006725909 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002666 // positive regulation of T cell tolerance induction // inferred from mutant phenotype /// 0002767 // immune response-inhibiting cell surface receptor signaling pathway // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0042130 // negative regulation of T cell proliferation // inferred from direct assay /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045591 // positive regulation of regulatory T cell differentiation // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 2001199 // negative regulation of dendritic cell differentiation // inferred from direct assay </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0042605 // peptide antigen binding // not recorded /// 0042803 // protein homodimerization activity // non-traceable author statement </td> <td> -127.43 </td> <td> 327.84 </td> <td> -3.64 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202320_at </td> <td> 202320_at </td> <td> NM_001520 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001520.1 /DEF=Homo sapiens general transcription factor IIIC, polypeptide 1 (alpha subunit, 220kD ) (GTF3C1), mRNA.  /FEA=mRNA /GEN=GTF3C1 /PROD=general transcription factor IIIC, polypeptide 1(alpha subunit, 220kD ) /DB_XREF=gi:4753160 /UG=Hs.331 general transcription factor IIIC, polypeptide 1 (alpha subunit, 220kD ) /FL=gb:U02619.1 gb:NM_001520.1 </td> <td> NM_001520 </td> <td> general transcription factor IIIC, polypeptide 1, alpha 220kDa </td> <td> GTF3C1 </td> <td> 2975 </td> <td> NM_001286242 /// NM_001520 /// XM_006721042 </td> <td> 0006351 // transcription, DNA-templated // inferred by curator /// 0006383 // transcription from RNA polymerase III promoter // inferred by curator /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0009303 // rRNA transcription // traceable author statement /// 0009304 // tRNA transcription // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042791 // 5S class rRNA transcription from RNA polymerase III type 1 promoter // inferred by curator /// 0042797 // tRNA transcription from RNA polymerase III promoter // inferred by curator </td> <td> 0000127 // transcription factor TFIIIC complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred by curator /// 0005515 // protein binding // inferred from physical interaction </td> <td> 48.50 </td> <td> 75.72 </td> <td> 3.64 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200842_s_at </td> <td> 200842_s_at </td> <td> AI475965 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI475965 /FEA=EST /DB_XREF=gi:4329010 /DB_XREF=est:tl96a09.x1 /CLONE=IMAGE:2154904 /UG=Hs.55921 glutamyl-prolyl-tRNA synthetase /FL=gb:NM_004446.1 </td> <td> AI475965 </td> <td> glutamyl-prolyl-tRNA synthetase </td> <td> EPRS </td> <td> 2058 </td> <td> NM_004446 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006424 // glutamyl-tRNA aminoacylation // inferred from electronic annotation /// 0006433 // prolyl-tRNA aminoacylation // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0043039 // tRNA aminoacylation // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from direct assay </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004818 // glutamate-tRNA ligase activity // traceable author statement /// 0004827 // proline-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds // inferred from electronic annotation /// 0035613 // RNA stem-loop binding // inferred from direct assay </td> <td> -147.68 </td> <td> 340.81 </td> <td> -3.64 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202817_s_at </td> <td> 202817_s_at </td> <td> NM_005637 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005637.1 /DEF=Homo sapiens synovial sarcoma, translocated to X chromosome (SSXT), mRNA.  /FEA=mRNA /GEN=SSXT /PROD=synovial sarcoma, translocated to X chromosome /DB_XREF=gi:5032124 /UG=Hs.153221 synovial sarcoma, translocated to X chromosome /FL=gb:NM_005637.1 </td> <td> NM_005637 </td> <td> synovial sarcoma translocation, chromosome 18 </td> <td> SS18 </td> <td> 6760 </td> <td> NM_001007559 /// NM_005637 /// XM_005258334 /// XM_006722527 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay </td> <td> 40.27 </td> <td> 57.01 </td> <td> 3.64 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200039_s_at </td> <td> 200039_s_at </td> <td> NM_002794 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002794.1 /DEF=Homo sapiens proteasome (prosome, macropain) subunit, beta type, 2 (PSMB2), mRNA.  /FEA=mRNA /GEN=PSMB2 /PROD=proteasome (prosome, macropain) subunit, betatype, 2 /DB_XREF=gi:4506194 /UG=Hs.1390 proteasome (prosome, macropain) subunit, beta type, 2 /FL=gb:BC000268.1 gb:NM_002794.1 gb:D26599.1 </td> <td> NM_002794 </td> <td> proteasome (prosome, macropain) subunit, beta type, 2 </td> <td> PSMB2 </td> <td> 5690 </td> <td> NM_001199779 /// NM_001199780 /// NM_002794 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -133.00 </td> <td> 799.52 </td> <td> -3.64 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209091_s_at </td> <td> 209091_s_at </td> <td> AF263293 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF263293.1 /DEF=Homo sapiens endophilin B1 mRNA, complete cds. /FEA=mRNA /PROD=endophilin B1 /DB_XREF=gi:8118529 /UG=Hs.136309 SH3-containing protein SH3GLB1 /FL=gb:AF263293.1 </td> <td> AF263293 </td> <td> SH3-domain GRB2-like endophilin B1 </td> <td> SH3GLB1 </td> <td> 51100 </td> <td> NM_001206651 /// NM_001206652 /// NM_001206653 /// NM_016009 /// XM_006710672 /// XM_006710673 </td> <td> 0006654 // phosphatidic acid biosynthetic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0051084 // 'de novo' posttranslational protein folding // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from direct assay /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005504 // fatty acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0042171 // lysophosphatidic acid acyltransferase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> -267.18 </td> <td> 695.14 </td> <td> -3.64 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208960_s_at </td> <td> 208960_s_at </td> <td> BE675435 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE675435 /FEA=EST /DB_XREF=gi:10035976 /DB_XREF=est:7f09a11.x1 /CLONE=IMAGE:3294140 /UG=Hs.285313 core promoter element binding protein /FL=gb:BC000311.1 gb:BC004301.1 gb:AF001461.1 gb:AB017493.1 gb:NM_001300.2 </td> <td> BE675435 </td> <td> Kruppel-like factor 6 </td> <td> KLF6 </td> <td> 1316 </td> <td> NM_001008490 /// NM_001160124 /// NM_001160125 /// NM_001300 /// NR_027653 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0016049 // cell growth // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030183 // B cell differentiation // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -98.98 </td> <td> 243.49 </td> <td> -3.63 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213668_s_at </td> <td> 213668_s_at </td> <td> AI989477 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI989477 /FEA=EST /DB_XREF=gi:5836358 /DB_XREF=est:ws25b11.x1 /CLONE=IMAGE:2498205 /UG=Hs.83484 SRY (sex determining region Y)-box 4 </td> <td> AI989477 </td> <td> SRY (sex determining region Y)-box 4 </td> <td> SOX4 </td> <td> 6659 </td> <td> NM_003107 </td> <td> 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001841 // neural tube formation // inferred from sequence or structural similarity /// 0002328 // pro-B cell differentiation // inferred from sequence or structural similarity /// 0003183 // mitral valve morphogenesis // inferred from sequence or structural similarity /// 0003211 // cardiac ventricle formation // inferred from sequence or structural similarity /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0003289 // atrial septum primum morphogenesis // inferred from sequence or structural similarity /// 0003357 // noradrenergic neuron differentiation // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0014009 // glial cell proliferation // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021522 // spinal cord motor neuron differentiation // inferred from sequence or structural similarity /// 0021782 // glial cell development // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035910 // ascending aorta morphogenesis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042769 // DNA damage response, detection of DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046826 // negative regulation of protein export from nucleus // inferred from mutant phenotype /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0060070 // canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 0060174 // limb bud formation // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060548 // negative regulation of cell death // inferred from sequence or structural similarity /// 0060563 // neuroepithelial cell differentiation // inferred from sequence or structural similarity /// 0060993 // kidney morphogenesis // inferred from sequence or structural similarity /// 0071333 // cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 2000761 // positive regulation of N-terminal peptidyl-lysine acetylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0001071 // nucleic acid binding transcription factor activity // inferred from mutant phenotype /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> -42.60 </td> <td> 118.92 </td> <td> -3.63 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221965_at </td> <td> 221965_at </td> <td> AI990326 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI990326 /FEA=EST /DB_XREF=gi:5837207 /DB_XREF=est:ws39d06.x1 /CLONE=IMAGE:2499563 /UG=Hs.86178 M-phase phosphoprotein 9 </td> <td> AI990326 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 39.70 </td> <td> 68.08 </td> <td> 3.63 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 211928_at </td> <td> 211928_at </td> <td> AB002323 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB002323.1 /DEF=Human mRNA for KIAA0325 gene, partial cds. /FEA=mRNA /GEN=KIAA0325 /DB_XREF=gi:2224590 /UG=Hs.7720 dynein, cytoplasmic, heavy polypeptide 1 </td> <td> AB002323 </td> <td> dynein, cytoplasmic 1, heavy chain 1 </td> <td> DYNC1H1 </td> <td> 1778 </td> <td> NM_001376 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007052 // mitotic spindle organization // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from sequence or structural similarity /// 0034063 // stress granule assembly // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // non-traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030286 // dynein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042623 // ATPase activity, coupled // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -116.37 </td> <td> 491.86 </td> <td> -3.63 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221090_s_at </td> <td> 221090_s_at </td> <td> NM_018233 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018233.1 /DEF=Homo sapiens hypothetical protein FLJ10826 (FLJ10826), mRNA. /FEA=mRNA /GEN=FLJ10826 /PROD=hypothetical protein FLJ10826 /DB_XREF=gi:8922693 /UG=Hs.24809 hypothetical protein FLJ10826 /FL=gb:NM_018233.1 </td> <td> NM_018233 </td> <td> 2-oxoglutarate and iron-dependent oxygenase domain containing 1 </td> <td> OGFOD1 </td> <td> 55239 </td> <td> NM_018233 </td> <td> 0006449 // regulation of translational termination // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0018126 // protein hydroxylation // inferred from direct assay /// 0019511 // peptidyl-proline hydroxylation // inferred from direct assay /// 0034063 // stress granule assembly // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from mutant phenotype </td> <td> 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0031543 // peptidyl-proline dioxygenase activity // inferred from direct assay /// 0031544 // peptidyl-proline 3-dioxygenase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> 51.83 </td> <td> 169.91 </td> <td> 3.63 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212133_at </td> <td> 212133_at </td> <td> AI681536 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI681536 /FEA=EST /DB_XREF=gi:4891718 /DB_XREF=est:tx47e03.x1 /CLONE=IMAGE:2272732 /UG=Hs.83724 hypothetical protein MGC5466 </td> <td> AI681536 </td> <td> non imprinted in Prader-Willi/Angelman syndrome 2 </td> <td> NIPA2 </td> <td> 81614 </td> <td> NM_001008860 /// NM_001008892 /// NM_001008894 /// NM_001184888 /// NM_001184889 /// NM_030922 /// XM_005272546 /// XM_005272547 /// XM_005272548 /// XM_005272549 /// XM_005272550 /// XM_005272552 /// XM_005272553 /// XM_006720364 /// XM_006720365 /// XM_006720366 /// XM_006720367 /// XM_006720368 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015693 // magnesium ion transport // inferred from electronic annotation </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0015095 // magnesium ion transmembrane transporter activity // inferred from electronic annotation </td> <td> 39.55 </td> <td> 75.03 </td> <td> 3.62 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 217777_s_at </td> <td> 217777_s_at </td> <td> NM_016395 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016395.1 /DEF=Homo sapiens butyrate-induced transcript 1 (HSPC121), mRNA. /FEA=mRNA /GEN=HSPC121 /PROD=butyrate-induced transcript 1 /DB_XREF=gi:7705458 /UG=Hs.260622 butyrate-induced transcript 1 /FL=gb:AF161470.1 gb:NM_016395.1 </td> <td> NM_016395 </td> <td> protein tyrosine phosphatase-like A domain containing 1 </td> <td> PTPLAD1 </td> <td> 51495 </td> <td> NM_016395 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // non-traceable author statement /// 0043547 // positive regulation of GTPase activity // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016829 // lyase activity // inferred from electronic annotation </td> <td> 48.15 </td> <td> 128.12 </td> <td> 3.62 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208114_s_at </td> <td> 208114_s_at </td> <td> NM_030980 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030980.1 /DEF=Homo sapiens hypothetical protein FLJ12671 (FLJ12671), mRNA. /FEA=mRNA /GEN=FLJ12671 /PROD=hypothetical protein FLJ12671 /DB_XREF=gi:13569959 /FL=gb:NM_030980.1 </td> <td> NM_030980 </td> <td> interferon stimulated exonuclease gene 20kDa-like 2 </td> <td> ISG20L2 </td> <td> 81875 </td> <td> NM_030980 /// XM_005245516 /// XM_005245517 /// XM_005245518 /// XM_006711560 /// XM_006711561 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 46.17 </td> <td> 113.69 </td> <td> 3.62 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 203447_at </td> <td> 203447_at </td> <td> AU157008 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU157008 /FEA=EST /DB_XREF=gi:11018529 /DB_XREF=est:AU157008 /CLONE=PLACE1005711 /UG=Hs.193725 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 /FL=gb:NM_005047.1 </td> <td> AU157008 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 </td> <td> PSMD5 </td> <td> 5711 </td> <td> NM_001270427 /// NM_005047 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070682 // proteasome regulatory particle assembly // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008540 // proteasome regulatory particle, base subcomplex // inferred from direct assay /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044183 // protein binding involved in protein folding // inferred from electronic annotation </td> <td> 62.97 </td> <td> 169.89 </td> <td> 3.62 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200094_s_at </td> <td> 200094_s_at </td> <td> AI004246 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI004246 /FEA=EST /DB_XREF=gi:3213756 /DB_XREF=est:ou03g06.x1 /CLONE=IMAGE:1625242 /UG=Hs.75309 eukaryotic translation elongation factor 2 </td> <td> AI004246 </td> <td> eukaryotic translation elongation factor 2 </td> <td> EEF2 </td> <td> 1938 </td> <td> NM_001961 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from genetic interaction /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from genetic interaction </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005844 // polysome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008494 // translation activator activity // inferred from genetic interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -619.53 </td> <td> 1762.54 </td> <td> -3.62 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 211825_s_at </td> <td> 211825_s_at </td> <td> AF327066 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF327066.1 /DEF=Homo sapiens Ewings sarcoma EWS-Fli1 (type 1) oncogene mRNA, complete cds.  /FEA=CDS /PROD=Ewings sarcoma EWS-Fli1 (type 1) oncogene /DB_XREF=gi:12963354 /UG=Hs.129953 Ewing sarcoma breakpoint region 1 /FL=gb:AF327066.1 </td> <td> AF327066 </td> <td> Fli-1 proto-oncogene, ETS transcription factor </td> <td> FLI1 </td> <td> 2313 </td> <td> NM_001167681 /// NM_001271010 /// NM_001271012 /// NM_002017 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0007599 // hemostasis // traceable author statement /// 0008015 // blood circulation // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0030154 // cell differentiation // not recorded /// 0035855 // megakaryocyte development // inferred from electronic annotation </td> <td> 0005634 // nucleus // not recorded </td> <td> 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0003677 // DNA binding // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -123.25 </td> <td> 198.07 </td> <td> -3.61 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 214168_s_at </td> <td> 214168_s_at </td> <td> AA813018 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA813018 /FEA=EST /DB_XREF=gi:2883082 /DB_XREF=est:aj44b11.s1 /CLONE=1393149 /UG=Hs.74614 tight junction protein 1 (zona occludens 1) </td> <td> AA813018 </td> <td> tight junction protein 1 </td> <td> TJP1 </td> <td> 7082 </td> <td> NM_003257 /// NM_175610 /// XM_005254616 /// XM_005254617 /// XM_005254618 /// XM_005254619 /// XM_005254620 /// XM_005254621 /// XM_006720660 /// XM_006720661 /// XM_006725553 /// XM_006725554 /// XM_006725555 /// XM_006725556 /// XM_006725557 /// XM_006725558 /// XM_006725559 /// XM_006725560 </td> <td> 0001825 // blastocyst formation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007043 // cell-cell junction assembly // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0035329 // hippo signaling // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043116 // negative regulation of vascular permeability // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0071000 // response to magnetism // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 1901350 // cell-cell signaling involved in cell-cell junction organization // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0014704 // intercalated disc // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016327 // apicolateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0043296 // apical junction complex // inferred from direct assay /// 0045177 // apical part of cell // inferred from direct assay /// 0046581 // intercellular canaliculus // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> -48.40 </td> <td> 159.05 </td> <td> -3.61 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202266_at </td> <td> 202266_at </td> <td> NM_016614 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016614.1 /DEF=Homo sapiens TRAF and TNF receptor-associated protein (AD022), mRNA.  /FEA=mRNA /GEN=AD022 /PROD=TRAF and TNF receptor-associated protein /DB_XREF=gi:7705261 /UG=Hs.46847 TRAF and TNF receptor-associated protein /FL=gb:AF201687.1 gb:AF223469.1 gb:NM_016614.1 </td> <td> NM_016614 </td> <td> tyrosyl-DNA phosphodiesterase 2 </td> <td> TDP2 </td> <td> 51567 </td> <td> NM_016614 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from direct assay /// 0006302 // double-strand break repair // inferred from mutant phenotype /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0045171 // intercellular bridge // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // traceable author statement /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003714 // transcription corepressor activity // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0036317 // tyrosyl-RNA phosphodiesterase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070260 // 5'-tyrosyl-DNA phosphodiesterase activity // inferred from direct assay /// 0070260 // 5'-tyrosyl-DNA phosphodiesterase activity // inferred from mutant phenotype </td> <td> 55.80 </td> <td> 164.43 </td> <td> 3.61 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 205128_x_at </td> <td> 205128_x_at </td> <td> NM_000962 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000962.1 /DEF=Homo sapiens prostaglandin-endoperoxide synthase 1 (prostaglandin GH synthase and cyclooxygenase) (PTGS1), mRNA.  /FEA=mRNA /GEN=PTGS1 /PROD=prostaglandin-endoperoxide synthase 1(prostaglandin GH synthase and cyclooxygenase) /DB_XREF=gi:11386140 /UG=Hs.88474 prostaglandin-endoperoxide synthase 1 (prostaglandin GH synthase and cyclooxygenase) /FL=gb:NM_000962.1 gb:M59979.1 </td> <td> NM_000962 </td> <td> prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) </td> <td> PTGS1 </td> <td> 5742 </td> <td> NM_000962 /// NM_001271164 /// NM_001271165 /// NM_001271166 /// NM_001271367 /// NM_001271368 /// NM_080591 /// XM_005252105 /// XM_006717192 </td> <td> 0001516 // prostaglandin biosynthetic process // inferred from sequence or structural similarity /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0019369 // arachidonic acid metabolic process // traceable author statement /// 0019371 // cyclooxygenase pathway // inferred from direct assay /// 0019371 // cyclooxygenase pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from sequence or structural similarity </td> <td> 0004601 // peroxidase activity // traceable author statement /// 0004666 // prostaglandin-endoperoxide synthase activity // inferred from direct assay /// 0004666 // prostaglandin-endoperoxide synthase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> 34.22 </td> <td> 148.49 </td> <td> 3.61 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200850_s_at </td> <td> 200850_s_at </td> <td> NM_006621 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006621.1 /DEF=Homo sapiens S-adenosylhomocysteine hydrolase-like 1 (AHCYL1), mRNA.  /FEA=mRNA /GEN=AHCYL1 /PROD=S-adenosylhomocysteine hydrolase-like 1 /DB_XREF=gi:5729723 /UG=Hs.4113 S-adenosylhomocysteine hydrolase-like 1 /FL=gb:U82761.1 gb:NM_006621.1 </td> <td> NM_006621 </td> <td> adenosylhomocysteinase-like 1 </td> <td> AHCYL1 </td> <td> 10768 </td> <td> NM_001242673 /// NM_001242674 /// NM_001242675 /// NM_001242676 /// NM_006621 </td> <td> 0006378 // mRNA polyadenylation // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0010765 // positive regulation of sodium ion transport // inferred from electronic annotation /// 0031440 // regulation of mRNA 3'-end processing // inferred from electronic annotation /// 0032412 // regulation of ion transmembrane transporter activity // inferred from electronic annotation /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004013 // adenosylhomocysteinase activity // inferred from electronic annotation /// 0004455 // ketol-acid reductoisomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation </td> <td> 109.22 </td> <td> 440.69 </td> <td> 3.61 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201393_s_at </td> <td> 201393_s_at </td> <td> NM_000876 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000876.1 /DEF=Homo sapiens insulin-like growth factor 2 receptor (IGF2R), mRNA. /FEA=mRNA /GEN=IGF2R /PROD=insulin-like growth factor 2 receptor /DB_XREF=gi:4504610 /UG=Hs.76473 insulin-like growth factor 2 receptor /FL=gb:J03528.1 gb:NM_000876.1 </td> <td> NM_000876 </td> <td> insulin-like growth factor 2 receptor </td> <td> IGF2R </td> <td> 3482 </td> <td> NM_000876 </td> <td> 0001889 // liver development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement </td> <td> 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005641 // nuclear envelope lumen // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030140 // trans-Golgi network transport vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001948 // glycoprotein binding // inferred from direct assay /// 0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0001972 // retinoic acid binding // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0005537 // mannose binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0031995 // insulin-like growth factor II binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from direct assay </td> <td> -60.75 </td> <td> 201.60 </td> <td> -3.61 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213302_at </td> <td> 213302_at </td> <td> AL044326 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL044326 /FEA=EST /DB_XREF=gi:5432548 /DB_XREF=est:DKFZp434A142_s1 /CLONE=DKFZp434A142 /UG=Hs.105478 phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) </td> <td> AL044326 </td> <td> phosphoribosylformylglycinamidine synthase </td> <td> PFAS </td> <td> 5198 </td> <td> NM_012393 /// XM_006721546 </td> <td> 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006189 // 'de novo' IMP biosynthetic process // inferred from electronic annotation /// 0006189 // 'de novo' IMP biosynthetic process // non-traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0009156 // ribonucleoside monophosphate biosynthetic process // inferred from electronic annotation /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004642 // phosphoribosylformylglycinamidine synthase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> 73.53 </td> <td> 84.99 </td> <td> 3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 206474_at </td> <td> 206474_at </td> <td> NM_002595 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002595.1 /DEF=Homo sapiens PCTAIRE protein kinase 2 (PCTK2), mRNA. /FEA=mRNA /GEN=PCTK2 /PROD=PCTAIRE protein kinase 2 /DB_XREF=gi:4505648 /UG=Hs.301511 PCTAIRE protein kinase 2 /FL=gb:NM_002595.1 </td> <td> NM_002595 </td> <td> cyclin-dependent kinase 17 </td> <td> CDK17 </td> <td> 5128 </td> <td> NM_001170464 /// NM_002595 /// XM_006719444 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td>  </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -39.33 </td> <td> 136.74 </td> <td> -3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 213427_at </td> <td> 213427_at </td> <td> NM_006638 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_006638.1 /DEF=Homo sapiens ribonuclease P, 40kD subunit (RPP40), mRNA. /FEA=CDS /GEN=RPP40 /PROD=ribonuclease P, 40kD subunit /DB_XREF=gi:5730016 /UG=Hs.115823 ribonuclease P, 40kD subunit /FL=gb:NM_006638.1 </td> <td> NM_006638 </td> <td> ribonuclease P/MRP 40kDa subunit </td> <td> RPP40 </td> <td> 10799 </td> <td> NM_001286132 /// NM_001286133 /// NM_006638 </td> <td> 0008033 // tRNA processing // inferred from electronic annotation /// 0090501 // RNA phosphodiester bond hydrolysis // traceable author statement /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005655 // nucleolar ribonuclease P complex // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation </td> <td> 0004526 // ribonuclease P activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 34.67 </td> <td> 116.39 </td> <td> 3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218651_s_at </td> <td> 218651_s_at </td> <td> NM_018357 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018357.1 /DEF=Homo sapiens hypothetical protein FLJ11196 (FLJ11196), mRNA. /FEA=mRNA /GEN=FLJ11196 /PROD=hypothetical protein FLJ11196 /DB_XREF=gi:8922933 /UG=Hs.6166 hypothetical protein FLJ11196 /FL=gb:NM_018357.1 </td> <td> NM_018357 </td> <td> La ribonucleoprotein domain family, member 6 </td> <td> LARP6 </td> <td> 55323 </td> <td> NM_001286679 /// NM_018357 /// NM_197958 </td> <td> 0006396 // RNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation </td> <td> -39.72 </td> <td> 62.44 </td> <td> -3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 214845_s_at </td> <td> 214845_s_at </td> <td> AF257659 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF257659.1 /DEF=Homo sapiens crocalbin-like protein mRNA, partial cds. /FEA=mRNA /PROD=crocalbin-like protein /DB_XREF=gi:8515717 /UG=Hs.302073 Homo sapiens crocalbin-like protein mRNA, partial cds </td> <td> AF257659 </td> <td> calumenin </td> <td> CALU </td> <td> 813 </td> <td> NM_001130674 /// NM_001199671 /// NM_001199672 /// NM_001199673 /// NM_001199674 /// NM_001219 /// NR_074086 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0033018 // sarcoplasmic reticulum lumen // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 97.22 </td> <td> 215.11 </td> <td> 3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212137_at </td> <td> 212137_at </td> <td> AV746402 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV746402 /FEA=EST /DB_XREF=gi:10865849 /DB_XREF=est:AV746402 /CLONE=NPAAMH12 /UG=Hs.75874 pregnancy-associated plasma protein A </td> <td> AV746402 </td> <td> La ribonucleoprotein domain family, member 1 </td> <td> LARP1 </td> <td> 23367 </td> <td> NM_015315 /// NM_033551 /// XM_005268404 /// XM_005268406 /// XM_005268407 /// XM_005268408 /// XM_006714775 /// XM_006714776 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0016239 // positive regulation of macroautophagy // inferred from mutant phenotype /// 0031929 // TOR signaling // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031931 // TORC1 complex // inferred from direct assay </td> <td> 0000339 // RNA cap binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008190 // eukaryotic initiation factor 4E binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from mutant phenotype /// 0031369 // translation initiation factor binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048027 // mRNA 5'-UTR binding // inferred from direct assay </td> <td> 122.05 </td> <td> 594.33 </td> <td> 3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 219065_s_at </td> <td> 219065_s_at </td> <td> NM_015955 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015955.1 /DEF=Homo sapiens CGI-27 protein (LOC51072), mRNA. /FEA=mRNA /GEN=LOC51072 /PROD=CGI-27 protein /DB_XREF=gi:7705719 /UG=Hs.20814 CGI-27 protein /FL=gb:AF132961.1 gb:NM_015955.1 </td> <td> NM_015955 </td> <td> dpy-30 homolog (C. elegans) /// mediator of cell motility 1 </td> <td> DPY30 /// MEMO1 </td> <td> 51072 /// 84661 </td> <td> NM_001137602 /// NM_015955 /// NM_032574 /// XM_005264351 /// XM_005264352 /// XM_005264612 /// XM_006712028 /// XM_006712117 /// XM_006712118 /// XM_006712119 /// XR_244937 /// XR_426982 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0048188 // Set1C/COMPASS complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> 51.42 </td> <td> 231.04 </td> <td> 3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208649_s_at </td> <td> 208649_s_at </td> <td> AF100752 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF100752.1 /DEF=Homo sapiens transitional endoplasmic reticulum ATPase mRNA, complete cds.  /FEA=mRNA /PROD=transitional endoplasmic reticulum ATPase /DB_XREF=gi:5410289 /UG=Hs.106357 valosin-containing protein /FL=gb:AF100752.1 gb:NM_007126.2 </td> <td> AF100752 </td> <td> valosin containing protein </td> <td> VCP </td> <td> 7415 </td> <td> NM_007126 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006281 // DNA repair // non-traceable author statement /// 0006302 // double-strand break repair // inferred from direct assay /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // non-traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // inferred from mutant phenotype /// 0019985 // translesion synthesis // inferred from mutant phenotype /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0030970 // retrograde protein transport, ER to cytosol // inferred from direct assay /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0045184 // establishment of protein localization // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0070842 // aggresome assembly // inferred from electronic annotation /// 1903006 // positive regulation of protein K63-linked deubiquitination // inferred from direct assay /// 1903007 // positive regulation of Lys63-specific deubiquitinase activity // inferred from direct assay </td> <td> 0000502 // proteasome complex // inferred from direct assay /// 0000836 // Hrd1p ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0035861 // site of double-strand break // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0009378 // four-way junction helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // traceable author statement /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0032403 // protein complex binding // inferred from electronic annotation /// 0035800 // deubiquitinase activator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 1990381 // ubiquitin-specific protease binding // inferred from physical interaction </td> <td> 155.60 </td> <td> 930.98 </td> <td> 3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212986_s_at </td> <td> 212986_s_at </td> <td> BF112255 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF112255 /FEA=EST /DB_XREF=gi:10941945 /DB_XREF=est:7l42g09.x1 /CLONE=IMAGE:3524176 /UG=Hs.57553 tousled-like kinase 2 </td> <td> BF112255 </td> <td> tousled-like kinase 2 </td> <td> TLK2 </td> <td> 11011 </td> <td> NM_001112707 /// NM_001284333 /// NM_001284363 /// NM_006852 /// XM_005256969 /// XM_005256970 /// XM_005256971 /// XM_005256973 /// XM_005256974 /// XM_005256975 /// XM_006721647 /// XM_006721648 /// XM_006721649 </td> <td> 0001672 // regulation of chromatin assembly or disassembly // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0010507 // negative regulation of autophagy // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0071480 // cellular response to gamma radiation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -35.83 </td> <td> 148.86 </td> <td> -3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 221778_at </td> <td> 221778_at </td> <td> BE217882 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE217882 /FEA=EST /DB_XREF=gi:8905200 /DB_XREF=est:hv31b02.x1 /CLONE=IMAGE:3174987 /UG=Hs.222707 KIAA1718 protein </td> <td> BE217882 </td> <td> lysine (K)-specific demethylase 7A </td> <td> KDM7A </td> <td> 80853 </td> <td> NM_030647 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030901 // midbrain development // inferred from sequence or structural similarity /// 0033169 // histone H3-K9 demethylation // inferred from direct assay /// 0035574 // histone H4-K20 demethylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070544 // histone H3-K36 demethylation // inferred from direct assay /// 0071557 // histone H3-K27 demethylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0005506 // iron ion binding // inferred from direct assay /// 0005506 // iron ion binding // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from direct assay /// 0032454 // histone demethylase activity (H3-K9 specific) // inferred from direct assay /// 0035064 // methylated histone binding // inferred from direct assay /// 0035575 // histone demethylase activity (H4-K20 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from direct assay /// 0071558 // histone demethylase activity (H3-K27 specific) // inferred from direct assay </td> <td> -64.22 </td> <td> 74.94 </td> <td> -3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 204461_x_at </td> <td> 204461_x_at </td> <td> NM_002853 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002853.1 /DEF=Homo sapiens RAD1 (S. pombe) homolog (RAD1), mRNA. /FEA=mRNA /GEN=RAD1 /PROD=RAD1 (S. pombe) homolog /DB_XREF=gi:4506384 /UG=Hs.7179 RAD1 (S. pombe) homolog /FL=gb:AF058392.1 gb:AF073524.1 gb:AF074717.1 gb:AF011905.1 gb:AF084512.1 gb:AF030933.1 gb:AF076841.1 gb:NM_002853.1 </td> <td> NM_002853 </td> <td> RAD1 homolog (S. pombe) </td> <td> RAD1 </td> <td> 5810 </td> <td> NM_001033673 /// NM_002853 /// NM_133282 /// NM_133377 /// NR_026591 </td> <td> 0000075 // cell cycle checkpoint // non-traceable author statement /// 0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0000738 // DNA catabolic process, exonucleolytic // inferred from electronic annotation /// 0006260 // DNA replication // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // traceable author statement /// 0007128 // meiotic prophase I // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0071479 // cellular response to ionizing radiation // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003684 // damaged DNA binding // non-traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008408 // 3'-5' exonuclease activity // inferred from direct assay /// 0008853 // exodeoxyribonuclease III activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 33.07 </td> <td> 66.84 </td> <td> 3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201470_at </td> <td> 201470_at </td> <td> NM_004832 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004832.1 /DEF=Homo sapiens glutathione-S-transferase like; glutathione transferase omega (GSTTLp28), mRNA.  /FEA=mRNA /GEN=GSTTLp28 /PROD=glutathione-S-transferase like /DB_XREF=gi:4758483 /UG=Hs.11465 glutathione-S-transferase like; glutathione transferase omega /FL=gb:BC000127.1 gb:U90313.1 gb:NM_004832.1 gb:AF212303.1 </td> <td> NM_004832 </td> <td> glutathione S-transferase omega 1 </td> <td> GSTO1 </td> <td> 9446 </td> <td> NM_001191002 /// NM_001191003 /// NM_004832 </td> <td> 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // inferred from direct assay /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred by curator /// 0014810 // positive regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion // inferred by curator /// 0019852 // L-ascorbic acid metabolic process // inferred from direct assay /// 0042178 // xenobiotic catabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0060316 // positive regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0071243 // cellular response to arsenic-containing substance // inferred from direct assay /// 1901687 // glutathione derivative biosynthetic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004364 // glutathione transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0045174 // glutathione dehydrogenase (ascorbate) activity // inferred from direct assay /// 0050610 // methylarsonate reductase activity // inferred from electronic annotation </td> <td> -156.88 </td> <td> 808.04 </td> <td> -3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 212039_x_at </td> <td> 212039_x_at </td> <td> BG339228 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG339228 /FEA=EST /DB_XREF=gi:13145666 /DB_XREF=est:602437093F1 /CLONE=IMAGE:4555102 /UG=Hs.119598 ribosomal protein L3 </td> <td> BG339228 </td> <td> RNA, U86 small nucleolar /// ribosomal protein L3 /// small nucleolar RNA, C/D box 83B </td> <td> RNU86 /// RPL3 /// SNORD83B </td> <td> 6122 /// 116936 /// 116938 </td> <td> NM_000967 /// NM_001033853 /// NR_000026 /// NR_000028 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1090.83 </td> <td> 4294.76 </td> <td> -3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 215723_s_at </td> <td> 215723_s_at </td> <td> AJ276230 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AJ276230.1 /DEF=Homo sapiens mRNA for partial phospholipase D1, splice variant PLD1ab2.  /FEA=mRNA /GEN=PLD1 /PROD=phospholipase D1 /DB_XREF=gi:7161182 /UG=Hs.82587 phospholipase D1, phophatidylcholine-specific </td> <td> AJ276230 </td> <td> phospholipase D1, phosphatidylcholine-specific </td> <td> PLD1 </td> <td> 5337 </td> <td> NM_001130081 /// NM_002662 /// XM_005247533 /// XM_005247534 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006654 // phosphatidic acid biosynthetic process // traceable author statement /// 0006655 // phosphatidylglycerol biosynthetic process // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004630 // phospholipase D activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0070290 // N-acylphosphatidylethanolamine-specific phospholipase D activity // inferred from electronic annotation </td> <td> -45.87 </td> <td> 73.36 </td> <td> -3.60 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 208159_x_at </td> <td> 208159_x_at </td> <td> NM_004399 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004399.1 /DEF=Homo sapiens DEADH (Asp-Glu-Ala-AspHis) box polypeptide 11 (S.cerevisiae CHL1-like helicase) (DDX11), transcript variant 2, mRNA.  /FEA=mRNA /GEN=DDX11 /PROD=DEADH (Asp-Glu-Ala-AspHis) box polypeptide 11 /DB_XREF=gi:4758135 /UG=Hs.27424 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 11 (S.cerevisiae CHL1-like helicase) /FL=gb:NM_004399.1 </td> <td> NM_004399 </td> <td> DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 </td> <td> DDX11 </td> <td> 1663 </td> <td> NM_001257144 /// NM_001257145 /// NM_004399 /// NM_030653 /// NM_030655 /// NM_152438 /// XM_005253331 /// XM_005253333 /// XM_006719041 /// XM_006719042 /// XM_006719043 /// XM_006719044 /// XM_006719045 /// XM_006719046 /// XM_006719047 /// XM_006719048 /// XM_006719049 /// XM_006719050 /// XM_006719051 /// XM_006719052 /// XM_006719053 /// XR_429031 </td> <td> 0000070 // mitotic sister chromatid segregation // traceable author statement /// 0000084 // mitotic S phase // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007062 // sister chromatid cohesion // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0000922 // spindle pole // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0030496 // midbody // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation </td> <td> 71.53 </td> <td> 108.51 </td> <td> 3.59 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 209339_at </td> <td> 209339_at </td> <td> U76248 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U76248.1 /DEF=Human hSIAH2 mRNA, complete cds. /FEA=mRNA /PROD=hSIAH2 /DB_XREF=gi:2673967 /UG=Hs.20191 seven in absentia (Drosophila) homolog 2 /FL=gb:U76248.1 gb:NM_005067.1 </td> <td> U76248 </td> <td> siah E3 ubiquitin protein ligase 2 </td> <td> SIAH2 </td> <td> 6478 </td> <td> NM_005067 </td> <td> 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031396 // regulation of protein ubiquitination // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0044257 // cellular protein catabolic process // inferred from genetic interaction /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from genetic interaction /// 2001141 // regulation of RNA biosynthetic process // traceable author statement /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005769 // early endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0003714 // transcription corepressor activity // traceable author statement /// 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031624 // ubiquitin conjugating enzyme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -39.27 </td> <td> 107.04 </td> <td> -3.59 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 202184_s_at </td> <td> 202184_s_at </td> <td> NM_018230 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018230.1 /DEF=Homo sapiens hypothetical protein FLJ10814 (FLJ10814), mRNA. /FEA=mRNA /GEN=FLJ10814 /PROD=hypothetical protein FLJ10814 /DB_XREF=gi:8922689 /UG=Hs.12457 hypothetical protein FLJ10814 /FL=gb:NM_018230.1 </td> <td> NM_018230 </td> <td> nucleoporin 133kDa </td> <td> NUP133 </td> <td> 55746 </td> <td> NM_018230 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006999 // nuclear pore organization // inferred from mutant phenotype /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048339 // paraxial mesoderm development // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031080 // nuclear pore outer ring // non-traceable author statement </td> <td> 0005487 // nucleocytoplasmic transporter activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 45.35 </td> <td> 123.25 </td> <td> 3.59 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 201762_s_at </td> <td> 201762_s_at </td> <td> NM_002818 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002818.1 /DEF=Homo sapiens proteasome (prosome, macropain) activator subunit 2 (PA28 beta) (PSME2), mRNA.  /FEA=mRNA /GEN=PSME2 /PROD=proteasome (prosome, macropain) activatorsubunit 2 (PA28 beta) /DB_XREF=gi:4506236 /UG=Hs.179774 proteasome (prosome, macropain) activator subunit 2 (PA28 beta) /FL=gb:D45248.1 gb:BC004368.1 gb:NM_002818.1 </td> <td> NM_002818 </td> <td> microRNA 7703 /// proteasome (prosome, macropain) activator subunit 2 (PA28 beta) </td> <td> MIR7703 /// PSME2 </td> <td> 5721 /// 102465801 </td> <td> NM_002818 /// NR_106990 /// XM_006720212 /// XM_006720213 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008537 // proteasome activator complex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> -81.25 </td> <td> 284.52 </td> <td> -3.59 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 218146_at </td> <td> 218146_at </td> <td> NM_018446 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018446.1 /DEF=Homo sapiens AD-017 protein (LOC55830), mRNA. /FEA=mRNA /GEN=LOC55830 /PROD=AD-017 protein /DB_XREF=gi:8923854 /UG=Hs.283737 AD-017 protein /FL=gb:BC001418.1 gb:AF157318.1 gb:NM_018446.1 </td> <td> NM_018446 </td> <td> glycosyltransferase 8 domain containing 1 </td> <td> GLT8D1 </td> <td> 55830 </td> <td> NM_001010983 /// NM_001278280 /// NM_001278281 /// NM_018446 /// NM_152932 /// XM_006713260 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> 49.40 </td> <td> 173.55 </td> <td> 3.59 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.48 </td> </tr>
  <tr> <td> 200943_at </td> <td> 200943_at </td> <td> NM_004965 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004965.1 /DEF=Homo sapiens high-mobility group (nonhistone chromosomal) protein 14 (HMG14), mRNA.  /FEA=mRNA /GEN=HMG14 /PROD=high-mobility group (nonhistone chromosomal)protein 14 /DB_XREF=gi:4826757 /UG=Hs.251064 high-mobility group (nonhistone chromosomal) protein 14 /FL=gb:BC000075.1 gb:J02621.1 gb:NM_004965.1 </td> <td> NM_004965 </td> <td> high mobility group nucleosome binding domain 1 </td> <td> HMGN1 </td> <td> 3150 </td> <td> NM_004965 </td> <td> 0000720 // pyrimidine dimer repair by nucleotide-excision repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from electronic annotation /// 0006325 // chromatin organization // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation /// 0010224 // response to UV-B // inferred from electronic annotation /// 0010225 // response to UV-C // inferred from electronic annotation /// 0032786 // positive regulation of DNA-templated transcription, elongation // traceable author statement /// 0040034 // regulation of development, heterochronic // inferred from electronic annotation /// 0048597 // post-embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from electronic annotation </td> <td> 293.62 </td> <td> 663.19 </td> <td> 3.59 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200832_s_at </td> <td> 200832_s_at </td> <td> AB032261 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB032261.1 /DEF=Homo sapiens Scd mRNA for stearoyl-CoA desaturase, complete cds. /FEA=mRNA /GEN=Scd /PROD=stearoyl-CoA desaturase /DB_XREF=gi:7415720 /UG=Hs.119597 stearoyl-CoA desaturase (delta-9-desaturase) /FL=gb:AF097514.1 gb:NM_005063.1 gb:AB032261.1 </td> <td> AB032261 </td> <td> stearoyl-CoA desaturase (delta-9-desaturase) </td> <td> SCD </td> <td> 6319 </td> <td> NM_005063 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004768 // stearoyl-CoA 9-desaturase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016717 // oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water // inferred from electronic annotation </td> <td> 86.78 </td> <td> 208.96 </td> <td> 3.59 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218121_at </td> <td> 218121_at </td> <td> NM_002134 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002134.2 /DEF=Homo sapiens heme oxygenase (decycling) 2 (HMOX2), mRNA. /FEA=mRNA /GEN=HMOX2 /PROD=heme oxygenase (decyclizing) 2 /DB_XREF=gi:8051607 /UG=Hs.284279 heme oxygenase (decycling) 2 /FL=gb:BC002396.1 gb:D21243.1 gb:NM_002134.2 </td> <td> NM_002134 </td> <td> heme oxygenase (decycling) 2 </td> <td> HMOX2 </td> <td> 3163 </td> <td> NM_001127204 /// NM_001127205 /// NM_001127206 /// NM_001286267 /// NM_001286268 /// NM_001286269 /// NM_001286270 /// NM_001286271 /// NM_002134 </td> <td> 0001666 // response to hypoxia // inferred from direct assay /// 0006778 // porphyrin-containing compound metabolic process // traceable author statement /// 0006788 // heme oxidation // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0042167 // heme catabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004392 // heme oxygenase (decyclizing) activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 47.58 </td> <td> 72.39 </td> <td> 3.58 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209484_s_at </td> <td> 209484_s_at </td> <td> AF201941 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF201941.1 /DEF=Homo sapiens DC8 (DC8) mRNA, complete cds. /FEA=mRNA /GEN=DC8 /PROD=DC8 /DB_XREF=gi:9295185 /UG=Hs.24427 DKFZP566O1646 protein /FL=gb:AF255793.1 gb:AF201941.1 </td> <td> AF201941 </td> <td> NSL1, MIS12 kinetochore complex component </td> <td> NSL1 </td> <td> 25936 </td> <td> NM_001042549 /// NM_015471 /// XM_006711267 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000444 // MIS12/MIND type complex // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 60.70 </td> <td> 187.75 </td> <td> 3.58 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201406_at </td> <td> 201406_at </td> <td> NM_021029 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021029.1 /DEF=Homo sapiens ribosomal protein L44 (RPL44), mRNA. /FEA=mRNA /GEN=RPL44 /PROD=ribosomal protein L44 /DB_XREF=gi:10445222 /UG=Hs.178391 ribosomal protein L44 /FL=gb:NM_021029.1 gb:BC001781.1 </td> <td> NM_021029 </td> <td> ribosomal protein L36a /// RPL36A-HNRNPH2 readthrough </td> <td> RPL36A /// RPL36A-HNRNPH2 </td> <td> 6173 /// 100529097 </td> <td> NM_001199972 /// NM_001199973 /// NM_001199974 /// NM_021029 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -545.70 </td> <td> 2933.53 </td> <td> -3.58 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208839_s_at </td> <td> 208839_s_at </td> <td> AL136810 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136810.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434G0222 (from clone DKFZp434G0222); complete cds.  /FEA=mRNA /GEN=DKFZp434G0222 /PROD=hypothetical protein /DB_XREF=gi:12053130 /UG=Hs.184786 TBP-interacting protein /FL=gb:AL136810.1 </td> <td> AL136810 </td> <td> cullin-associated and neddylation-dissociated 1 </td> <td> CAND1 </td> <td> 55832 </td> <td> NM_018448 </td> <td> 0010265 // SCF complex assembly // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030154 // cell differentiation // inferred from direct assay /// 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045899 // positive regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from electronic annotation </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017025 // TBP-class protein binding // inferred from electronic annotation </td> <td> 47.17 </td> <td> 100.04 </td> <td> 3.58 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200088_x_at </td> <td> 200088_x_at </td> <td> AK026491 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026491.1 /DEF=Homo sapiens cDNA: FLJ22838 fis, clone KAIA4494, highly similar to HUML12A Human ribosomal protein L12 mRNA.  /FEA=mRNA /DB_XREF=gi:10439364 /UG=Hs.182979 ribosomal protein L12 </td> <td> AK026491 </td> <td> neurobeachin-like 1 /// ribosomal protein L12 </td> <td> NBEAL1 /// RPL12 </td> <td> 6136 /// 65065 </td> <td> NM_000976 /// NM_001099273 /// NM_001114132 /// NM_198945 /// NM_205543 /// XM_005246787 /// XM_005246788 /// XM_006712698 /// XM_006712699 /// XM_006712700 /// XM_006712701 /// XM_006712702 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -521.43 </td> <td> 2873.86 </td> <td> -3.58 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 214696_at </td> <td> 214696_at </td> <td> AF070569 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF070569.1 /DEF=Homo sapiens clone 24659 mRNA sequence. /FEA=mRNA /DB_XREF=gi:3387938 /UG=Hs.29206 Homo sapiens clone 24659 mRNA sequence </td> <td> AF070569 </td> <td> microRNA 22 /// MIR22 host gene (non-protein coding) </td> <td> MIR22 /// MIR22HG </td> <td> 84981 /// 407004 </td> <td> NM_001001870 /// NM_032895 /// NR_028502 /// NR_028503 /// NR_028504 /// NR_028505 /// NR_029494 </td> <td>  </td> <td>  </td> <td>  </td> <td> 67.55 </td> <td> 176.90 </td> <td> 3.58 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 221920_s_at </td> <td> 221920_s_at </td> <td> BE677761 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE677761 /FEA=EST /DB_XREF=gi:10038376 /DB_XREF=est:7f59h05.x1 /CLONE=IMAGE:3299001 /UG=Hs.300496 mitochondrial solute carrier </td> <td> BE677761 </td> <td> solute carrier family 25 (mitochondrial iron transporter), member 37 </td> <td> SLC25A37 </td> <td> 51312 </td> <td> NM_016612 /// XM_005273526 /// XM_006716352 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0034755 // iron ion transmembrane transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048250 // mitochondrial iron ion transport // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005381 // iron ion transmembrane transporter activity // inferred from electronic annotation </td> <td> -33.60 </td> <td> 33.35 </td> <td> -3.58 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208745_at </td> <td> 208745_at </td> <td> AA917672 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA917672 /FEA=EST /DB_XREF=gi:3057562 /DB_XREF=est:on46d09.s1 /CLONE=IMAGE:1559729 /UG=Hs.107476 ATP synthase, H+ transporting, mitochondrial F1F0, subunit g /FL=gb:AF070655.1 </td> <td> AA917672 </td> <td> ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G </td> <td> ATP5L </td> <td> 10632 </td> <td> NM_006476 /// NR_033759 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator </td> <td> 39.73 </td> <td> 66.44 </td> <td> 3.57 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 217856_at </td> <td> 217856_at </td> <td> AF182415 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF182415.1 /DEF=Homo sapiens MDS014 (MDS014) mRNA, complete cds. /FEA=mRNA /GEN=MDS014 /PROD=MDS014 /DB_XREF=gi:10197629 /UG=Hs.65648 RNA binding motif protein 8A /FL=gb:AF182415.1 gb:AF231511.1 gb:AF127761.1 gb:NM_005105.1 gb:AF161463.1 gb:AF198620.1 </td> <td> AF182415 </td> <td> RNA binding motif protein 8A </td> <td> RBM8A </td> <td> 9939 </td> <td> NM_005105 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from mutant phenotype /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003729 // mRNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 36.03 </td> <td> 58.59 </td> <td> 3.57 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 213358_at </td> <td> 213358_at </td> <td> AB018345 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB018345.1 /DEF=Homo sapiens mRNA for KIAA0802 protein, partial cds. /FEA=mRNA /GEN=KIAA0802 /PROD=KIAA0802 protein /DB_XREF=gi:3882324 /UG=Hs.27657 KIAA0802 protein </td> <td> AB018345 </td> <td> microtubule crosslinking factor 1 </td> <td> MTCL1 </td> <td> 23255 </td> <td> NM_015210 /// XM_005258098 /// XM_005258099 /// XM_006722318 /// XM_006722319 /// XM_006722320 </td> <td> 0001578 // microtubule bundle formation // inferred from sequence or structural similarity /// 0010506 // regulation of autophagy // inferred from electronic annotation /// 0045197 // establishment or maintenance of epithelial cell apical/basal polarity // inferred from sequence or structural similarity /// 0090314 // positive regulation of protein targeting to membrane // inferred from sequence or structural similarity /// 2000576 // positive regulation of microtubule motor activity // inferred from sequence or structural similarity </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016327 // apicolateral plasma membrane // inferred from sequence or structural similarity /// 0016328 // lateral plasma membrane // inferred from sequence or structural similarity /// 0030496 // midbody // inferred from direct assay /// 0097427 // microtubule bundle // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 39.33 </td> <td> 95.06 </td> <td> 3.57 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 213687_s_at </td> <td> 213687_s_at </td> <td> BE968801 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE968801 /FEA=EST /DB_XREF=gi:10579506 /DB_XREF=est:601649806F1 /CLONE=IMAGE:3933816 /UG=Hs.179666 uncharacterized hypothalamus protein HSMNP1 </td> <td> BE968801 </td> <td> ribosomal protein L35a </td> <td> RPL35A </td> <td> 6165 </td> <td> NM_000996 /// XM_005269350 /// XM_005269351 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred from genetic interaction /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from genetic interaction /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042273 // ribosomal large subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -382.27 </td> <td> 2036.56 </td> <td> -3.57 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 222196_at </td> <td> 222196_at </td> <td> AK000470 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK000470.1 /DEF=Homo sapiens cDNA FLJ20463 fis, clone KAT06143. /FEA=mRNA /DB_XREF=gi:7020580 /UG=Hs.120769 Homo sapiens cDNA FLJ20463 fis, clone KAT06143 </td> <td> AK000470 </td> <td> zinc finger protein 839 pseudogene </td> <td> LOC389906 </td> <td> 389906 </td> <td> NR_034031 </td> <td>  </td> <td>  </td> <td>  </td> <td> 32.80 </td> <td> 31.52 </td> <td> 3.57 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 203371_s_at </td> <td> 203371_s_at </td> <td> NM_002491 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002491.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3 (12kD, B12) (NDUFB3), mRNA.  /FEA=mRNA /GEN=NDUFB3 /PROD=NADH dehydrogenase (ubiquinone) 1 betasubcomplex, 3 (12kD, B12) /DB_XREF=gi:4505360 /UG=Hs.109760 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3 (12kD, B12) /FL=gb:AF047183.1 gb:NM_002491.1 </td> <td> NM_002491 </td> <td> NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa </td> <td> NDUFB3 </td> <td> 4709 </td> <td> NM_001257102 /// NM_002491 /// XM_006712544 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> 56.25 </td> <td> 328.15 </td> <td> 3.57 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 213349_at </td> <td> 213349_at </td> <td> AI934469 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI934469 /FEA=EST /DB_XREF=gi:5673429 /DB_XREF=est:wp58d01.x1 /CLONE=IMAGE:2465953 /UG=Hs.179507 KIAA0779 protein </td> <td> AI934469 </td> <td> transmembrane and coiled-coil domain family 1 </td> <td> TMCC1 </td> <td> 23023 </td> <td> NM_001017395 /// NM_001128224 /// NM_015008 /// NR_033361 /// XM_006713542 /// XM_006713543 /// XM_006713544 /// XM_006713545 /// XM_006713546 /// XM_006713547 /// XM_006713548 /// XM_006713549 /// XM_006713550 /// XM_006713551 /// XM_006713552 /// XM_006713553 /// XM_006713554 </td> <td>  </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -44.83 </td> <td> 108.81 </td> <td> -3.56 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 203828_s_at </td> <td> 203828_s_at </td> <td> NM_004221 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004221.1 /DEF=Homo sapiens natural killer cell transcript 4 (NK4), mRNA. /FEA=mRNA /GEN=NK4 /PROD=natural killer cell transcript 4 /DB_XREF=gi:4758811 /UG=Hs.943 natural killer cell transcript 4 /FL=gb:M59807.1 gb:NM_004221.1 </td> <td> NM_004221 </td> <td> interleukin 32 </td> <td> IL32 </td> <td> 9235 </td> <td> NM_001012631 /// NM_001012632 /// NM_001012633 /// NM_001012634 /// NM_001012635 /// NM_001012636 /// NM_001012718 /// NM_004221 /// XM_005255686 </td> <td> 0006952 // defense response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -146.30 </td> <td> 225.62 </td> <td> -3.56 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 210275_s_at </td> <td> 210275_s_at </td> <td> AF062347 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF062347.1 /DEF=Homo sapiens zinc finger protein 216 splice variant 2 (ZNF216) mRNA, complete cds.  /FEA=mRNA /GEN=ZNF216 /PROD=zinc finger protein 216 splice variant 2 /DB_XREF=gi:3643810 /UG=Hs.3776 zinc finger protein 216 /FL=gb:AF062347.1 </td> <td> AF062347 </td> <td> zinc finger, AN1-type domain 5 </td> <td> ZFAND5 </td> <td> 7763 </td> <td> NM_001102420 /// NM_001102421 /// NM_001278243 /// NM_001278244 /// NM_001278245 /// NM_006007 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0060324 // face development // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -120.13 </td> <td> 931.69 </td> <td> -3.56 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 213485_s_at </td> <td> 213485_s_at </td> <td> AK000002 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK000002.1 /DEF=Homo sapiens mRNA for FLJ00002 protein, partial cds. /FEA=mRNA /GEN=FLJ00002 /PROD=FLJ00002 protein /DB_XREF=gi:7209304 /UG=Hs.55879 hypothetical protein MGC2487 </td> <td> AK000002 </td> <td> ATP-binding cassette, sub-family C (CFTR/MRP), member 10 </td> <td> ABCC10 </td> <td> 89845 </td> <td> NM_001198934 /// NM_033450 /// XM_005249470 /// XM_006715240 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation </td> <td> 39.48 </td> <td> 99.46 </td> <td> 3.56 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 217967_s_at </td> <td> 217967_s_at </td> <td> AF288391 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF288391.1 /DEF=Homo sapiens C1orf24 mRNA, complete cds. /FEA=mRNA /PROD=C1orf24 /DB_XREF=gi:12620191 /UG=Hs.48778 niban protein /FL=gb:AB050477.1 gb:NM_022083.1 gb:AF288391.1 </td> <td> AF288391 </td> <td> family with sequence similarity 129, member A </td> <td> FAM129A </td> <td> 116496 </td> <td> NM_052966 </td> <td> 0001933 // negative regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0001934 // positive regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 0045727 // positive regulation of translation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -31.38 </td> <td> 39.86 </td> <td> -3.56 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209188_x_at </td> <td> 209188_x_at </td> <td> BC002809 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002809.1 /DEF=Homo sapiens, down-regulator of transcription 1, TBP-binding (negative cofactor 2), clone MGC:4292, mRNA, complete cds.  /FEA=mRNA /PROD=down-regulator of transcription 1, TBP-binding(negative cofactor 2) /DB_XREF=gi:12803924 /UG=Hs.16697 down-regulator of transcription 1, TBP-binding (negative cofactor 2) /FL=gb:BC002809.1 </td> <td> BC002809 </td> <td> down-regulator of transcription 1, TBP-binding (negative cofactor 2) </td> <td> DR1 </td> <td> 1810 </td> <td> NM_001938 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay </td> <td> 0003677 // DNA binding // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0017025 // TBP-class protein binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -56.82 </td> <td> 256.24 </td> <td> -3.56 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209974_s_at </td> <td> 209974_s_at </td> <td> AF047473 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF047473.1 /DEF=Homo sapiens testis mitotic checkpoint BUB3 (BUB3) mRNA, complete cds.  /FEA=mRNA /GEN=BUB3 /PROD=testis mitotic checkpoint BUB3 /DB_XREF=gi:3378103 /UG=Hs.40323 BUB3 (budding uninhibited by benzimidazoles 3, yeast) homolog /FL=gb:AF047473.1 </td> <td> AF047473 </td> <td> BUB3 mitotic checkpoint protein </td> <td> BUB3 </td> <td> 9184 </td> <td> NM_001007793 /// NM_004725 </td> <td> 0000070 // mitotic sister chromatid segregation // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0008608 // attachment of spindle microtubules to kinetochore // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051983 // regulation of chromosome segregation // inferred from electronic annotation /// 0071173 // spindle assembly checkpoint // inferred from direct assay </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 167.40 </td> <td> 307.95 </td> <td> 3.56 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200907_s_at </td> <td> 200907_s_at </td> <td> AU157932 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU157932 /FEA=EST /DB_XREF=gi:11019453 /DB_XREF=est:AU157932 /CLONE=PLACE1010217 /UG=Hs.194431 palladin /FL=gb:AF077041.1 gb:AF151909.1 gb:NM_016081.1 </td> <td> AU157932 </td> <td> palladin, cytoskeletal associated protein </td> <td> PALLD </td> <td> 23022 </td> <td> NM_001166108 /// NM_001166109 /// NM_001166110 /// NM_016081 /// XM_005262861 /// XM_005262862 /// XM_005262863 /// XM_005262864 /// XM_005262865 /// XM_005262866 </td> <td> 0007010 // cytoskeleton organization // non-traceable author statement </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0051371 // muscle alpha-actinin binding // traceable author statement </td> <td> 51.45 </td> <td> 177.50 </td> <td> 3.56 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 214030_at </td> <td> 214030_at </td> <td> BE501352 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE501352 /FEA=EST /DB_XREF=gi:9703760 /DB_XREF=est:7a41e05.x1 /CLONE=IMAGE:3221312 /UG=Hs.23294 ESTs, Weakly similar to T15138 hypothetical protein T28F2.4 - Caenorhabditis elegans C.elegans </td> <td> BE501352 </td> <td> beta-gamma crystallin domain containing 3 </td> <td> CRYBG3 </td> <td> 131544 </td> <td> NM_153605 /// XM_005247117 /// XR_241467 </td> <td>  </td> <td>  </td> <td>  </td> <td> 50.77 </td> <td> 91.44 </td> <td> 3.55 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202757_at </td> <td> 202757_at </td> <td> NM_015456 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015456.1 /DEF=Homo sapiens DKFZP586B0519 protein (DKFZP586B0519), mRNA. /FEA=mRNA /GEN=DKFZP586B0519 /PROD=DKFZP586B0519 protein /DB_XREF=gi:7661663 /UG=Hs.27633 DKFZP586B0519 protein /FL=gb:AL050280.1 gb:NM_015456.1 </td> <td> NM_015456 </td> <td> negative elongation factor complex member B </td> <td> NELFB </td> <td> 25920 </td> <td> NM_015456 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0032021 // NELF complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 35.07 </td> <td> 157.54 </td> <td> 3.55 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218103_at </td> <td> 218103_at </td> <td> NM_017647 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017647.1 /DEF=Homo sapiens hypothetical protein FLJ20062 (FLJ20062), mRNA. /FEA=mRNA /GEN=FLJ20062 /PROD=hypothetical protein FLJ20062 /DB_XREF=gi:8923066 /UG=Hs.257486 hypothetical protein FLJ20062 /FL=gb:BC000131.1 gb:NM_017647.1 </td> <td> NM_017647 </td> <td> FtsJ homolog 3 (E. coli) </td> <td> FTSJ3 </td> <td> 117246 </td> <td> NM_017647 </td> <td> 0000453 // enzyme-directed rRNA 2'-O-methylation // inferred from electronic annotation /// 0001510 // RNA methylation // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0031167 // rRNA methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0030688 // preribosome, small subunit precursor // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008649 // rRNA methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 50.20 </td> <td> 139.05 </td> <td> 3.55 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200985_s_at </td> <td> 200985_s_at </td> <td> NM_000611 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000611.1 /DEF=Homo sapiens CD59 antigen p18-20 (antigen identified by monoclonal antibodies 16.3A5, EJ16, EJ30, EL32 and G344) (CD59), mRNA.  /FEA=mRNA /GEN=CD59 /PROD=CD59 antigen p18-20 (antigen identified bymonoclonal antibodies 16.3A5, EJ16, EJ30, EL32 and G344) /DB_XREF=gi:10835164 /UG=Hs.119663 CD59 antigen p18-20 (antigen identified by monoclonal antibodies 16.3A5, EJ16, EJ30, EL32 and G344) /FL=gb:NM_000611.1 gb:M34671.1 </td> <td> NM_000611 </td> <td> CD59 molecule, complement regulatory protein </td> <td> CD59 </td> <td> 966 </td> <td> NM_000611 /// NM_001127223 /// NM_001127225 /// NM_001127226 /// NM_001127227 /// NM_203329 /// NM_203330 /// NM_203331 </td> <td> 0001775 // cell activation // not recorded /// 0001971 // negative regulation of activation of membrane attack complex // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030449 // regulation of complement activation // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement </td> <td> 0005576 // extracellular region // not recorded /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0031362 // anchored component of external side of plasma membrane // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043218 // compact myelin // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001848 // complement binding // not recorded /// 0005515 // protein binding // inferred from physical interaction </td> <td> 173.05 </td> <td> 1517.25 </td> <td> 3.55 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202664_at </td> <td> 202664_at </td> <td> AW058622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW058622 /FEA=EST /DB_XREF=gi:5934261 /DB_XREF=est:wy59c01.x1 /CLONE=IMAGE:2552832 /UG=Hs.24143 Wiskott-Aldrich syndrome protein interacting protein /FL=gb:NM_003387.2 </td> <td> AW058622 </td> <td> WAS/WASL interacting protein family, member 1 </td> <td> WIPF1 </td> <td> 7456 </td> <td> NM_001077269 /// NM_003387 /// XM_006712727 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0008154 // actin polymerization or depolymerization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046827 // positive regulation of protein export from nucleus // inferred from electronic annotation /// 0051707 // response to other organism // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005522 // profilin binding // traceable author statement </td> <td> 34.03 </td> <td> 35.41 </td> <td> 3.55 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 221802_s_at </td> <td> 221802_s_at </td> <td> AU157109 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU157109 /FEA=EST /DB_XREF=gi:11018630 /DB_XREF=est:AU157109 /CLONE=PLACE1006159 /UG=Hs.23740 KIAA1598 protein </td> <td> AU157109 </td> <td> KIAA1598 </td> <td> KIAA1598 </td> <td> 57698 </td> <td> NM_001127211 /// NM_001258298 /// NM_001258299 /// NM_001258300 /// NM_018330 /// XM_005270002 /// XM_006717931 </td> <td> 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation </td> <td> 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation </td> <td> 34.15 </td> <td> 52.65 </td> <td> 3.55 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202241_at </td> <td> 202241_at </td> <td> NM_025195 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025195.1 /DEF=Homo sapiens phosphoprotein regulated by mitogenic pathways (C8FW), mRNA.  /FEA=mRNA /GEN=C8FW /PROD=G-protein-coupled receptor induced protein /DB_XREF=gi:13399327 /UG=Hs.7837 phosphoprotein regulated by mitogenic pathways /FL=gb:AF205437.1 gb:NM_025195.1 </td> <td> NM_025195 </td> <td> tribbles pseudokinase 1 </td> <td> TRIB1 </td> <td> 10221 </td> <td> NM_001282985 /// NM_025195 /// XM_006716496 /// XM_006716497 /// XR_428373 </td> <td> 0006468 // protein phosphorylation // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0007254 // JNK cascade // inferred from mutant phenotype /// 0014912 // negative regulation of smooth muscle cell migration // inferred from mutant phenotype /// 0031665 // negative regulation of lipopolysaccharide-mediated signaling pathway // inferred from mutant phenotype /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0043405 // regulation of MAP kinase activity // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from mutant phenotype /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0004672 // protein kinase activity // traceable author statement /// 0004860 // protein kinase inhibitor activity // inferred from mutant phenotype /// 0005524 // ATP binding // traceable author statement /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031434 // mitogen-activated protein kinase kinase binding // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from sequence or structural similarity /// 0055106 // ubiquitin-protein transferase regulator activity // inferred from sequence or structural similarity </td> <td> -127.68 </td> <td> 290.06 </td> <td> -3.55 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 217776_at </td> <td> 217776_at </td> <td> AF167438 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF167438.1 /DEF=Homo sapiens androgen-regulated short-chain dehydrogenasereductase 1 (ARSDR1) mRNA, complete cds.  /FEA=mRNA /GEN=ARSDR1 /PROD=androgen-regulated short-chaindehydrogenasereductase 1 /DB_XREF=gi:9622123 /UG=Hs.179817 CGI-82 protein /FL=gb:BC000112.1 gb:AF151840.1 gb:NM_016026.1 gb:AF167438.1 </td> <td> AF167438 </td> <td> retinol dehydrogenase 11 (all-trans/9-cis/11-cis) </td> <td> RDH11 </td> <td> 51109 </td> <td> NM_001252650 /// NM_016026 </td> <td> 0001523 // retinoid metabolic process // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016062 // adaptation of rhodopsin mediated signaling // inferred from electronic annotation /// 0042572 // retinol metabolic process // inferred from sequence or structural similarity /// 0042574 // retinal metabolic process // inferred from direct assay /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004745 // retinol dehydrogenase activity // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from electronic annotation /// 0052650 // NADP-retinol dehydrogenase activity // inferred from direct assay </td> <td> 107.65 </td> <td> 180.28 </td> <td> 3.55 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 210532_s_at </td> <td> 210532_s_at </td> <td> AF116639 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF116639.1 /DEF=Homo sapiens PRO1574 mRNA, complete cds. /FEA=mRNA /PROD=PRO1574 /DB_XREF=gi:7959779 /UG=Hs.109052 chromosome 14 open reading frame 2 /FL=gb:AF116639.1 </td> <td> AF116639 </td> <td> chromosome 14 open reading frame 2 </td> <td> C14orf2 </td> <td> 9556 </td> <td> NM_001127393 /// NM_004894 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td>  </td> <td> 180.07 </td> <td> 1020.44 </td> <td> 3.54 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201933_at </td> <td> 201933_at </td> <td> NM_002768 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002768.1 /DEF=Homo sapiens procollagen (type III) N-endopeptidase (PCOLN3), mRNA. /FEA=mRNA /GEN=PCOLN3 /PROD=procollagen (type III) N-endopeptidase /DB_XREF=gi:4506138 /UG=Hs.183138 procollagen (type III) N-endopeptidase /FL=gb:U58048.1 gb:NM_002768.1 gb:AF281063.1 </td> <td> NM_002768 </td> <td> charged multivesicular body protein 1A </td> <td> CHMP1A </td> <td> 5119 </td> <td> NM_001083314 /// NM_002768 /// NR_046418 </td> <td> 0000910 // cytokinesis // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007076 // mitotic chromosome condensation // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from direct assay /// 0016458 // gene silencing // inferred from direct assay /// 0045014 // negative regulation of transcription by glucose // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000794 // condensed nuclear chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // traceable author statement /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> 39.43 </td> <td> 106.94 </td> <td> 3.54 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 211950_at </td> <td> 211950_at </td> <td> AB007931 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB007931.1 /DEF=Homo sapiens mRNA for KIAA0462 protein, partial cds. /FEA=mRNA /GEN=KIAA0462 /PROD=KIAA0462 protein /DB_XREF=gi:3413885 /UG=Hs.297641 KIAA0462 protein </td> <td> AB007931 </td> <td> ubiquitin protein ligase E3 component n-recognin 4 </td> <td> UBR4 </td> <td> 23352 </td> <td> NM_020765 /// XM_005245802 /// XM_006710503 /// XM_006710504 /// XM_006710505 /// XM_006710506 /// XM_006710507 /// XM_006710508 /// XM_006710509 /// XM_006710510 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -161.45 </td> <td> 307.50 </td> <td> -3.54 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 210097_s_at </td> <td> 210097_s_at </td> <td> AF130102 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF130102.1 /DEF=Homo sapiens clone FLB2205 PRO0522 mRNA, complete cds. /FEA=mRNA /PROD=PRO0522 /DB_XREF=gi:11493507 /UG=Hs.106346 retinoic acid repressible protein /FL=gb:AF130102.1 </td> <td> AF130102 </td> <td> nucleolar protein 7, 27kDa </td> <td> NOL7 </td> <td> 51406 </td> <td> NM_016167 /// XM_005249173 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -53.67 </td> <td> 372.91 </td> <td> -3.54 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 45828_at </td> <td> 45828_at </td> <td> AI768100 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI768100:wg81b02.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2371467 /clone_end=3' /gb=AI768100 /gi=5234609 /ug=Hs.6045 /len=573 </td> <td> AI768100 </td> <td> ATP5S-like </td> <td> ATP5SL </td> <td> 55101 </td> <td> NM_001167867 /// NM_001167868 /// NM_001167869 /// NM_001167870 /// NM_001167871 /// NM_018035 /// NR_030765 /// XM_006723258 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation </td> <td>  </td> <td> 47.63 </td> <td> 216.84 </td> <td> 3.54 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202616_s_at </td> <td> 202616_s_at </td> <td> AI631140 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI631140 /FEA=EST /DB_XREF=gi:4682470 /DB_XREF=est:ts93b07.x1 /CLONE=IMAGE:2238805 /UG=Hs.3239 methyl CpG binding protein 2 (Rett syndrome) /FL=gb:AF158180.1 gb:NM_004992.2 gb:L37298.1 </td> <td> AI631140 </td> <td> methyl CpG binding protein 2 </td> <td> MECP2 </td> <td> 4204 </td> <td> NM_001110792 /// NM_004992 /// XM_005274681 /// XM_005274682 /// XM_005274683 /// XM_006724819 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001662 // behavioral fear response // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001964 // startle response // inferred from electronic annotation /// 0001976 // neurological system process involved in regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0006020 // inositol metabolic process // inferred from electronic annotation /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0006342 // chromatin silencing // inferred from electronic annotation /// 0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0006576 // cellular biogenic amine metabolic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0007616 // long-term memory // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0008211 // glucocorticoid metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009405 // pathogenesis // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0016571 // histone methylation // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0019230 // proprioception // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021591 // ventricular system development // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0031061 // negative regulation of histone methylation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032048 // cardiolipin metabolic process // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from electronic annotation /// 0035067 // negative regulation of histone acetylation // inferred from electronic annotation /// 0035176 // social behavior // inferred from electronic annotation /// 0040029 // regulation of gene expression, epigenetic // inferred from electronic annotation /// 0042551 // neuron maturation // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0046470 // phosphatidylcholine metabolic process // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0050432 // catecholamine secretion // inferred from electronic annotation /// 0050884 // neuromuscular process controlling posture // inferred from electronic annotation /// 0050905 // neuromuscular process // inferred from electronic annotation /// 0051965 // positive regulation of synapse assembly // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation </td> <td> 0000792 // heterochromatin // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation </td> <td> 0003677 // DNA binding // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008327 // methyl-CpG binding // inferred from electronic annotation /// 0010385 // double-stranded methylated DNA binding // inferred from mutant phenotype /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0035197 // siRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> 33.05 </td> <td> 38.85 </td> <td> 3.54 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 214773_x_at </td> <td> 214773_x_at </td> <td> AI983505 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI983505 /FEA=EST /DB_XREF=gi:5810724 /DB_XREF=est:wt49h12.x1 /CLONE=IMAGE:2510855 /UG=Hs.137576 ribosomal protein L34 pseudogene 1 </td> <td> AI983505 </td> <td> TOR signaling pathway regulator </td> <td> TIPRL </td> <td> 261726 </td> <td> NM_001031800 /// NM_152902 </td> <td> 0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0034048 // negative regulation of protein phosphatase type 2A activity // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 42.85 </td> <td> 88.60 </td> <td> 3.54 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 214941_s_at </td> <td> 214941_s_at </td> <td> AA675900 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA675900 /FEA=EST /DB_XREF=gi:2775247 /DB_XREF=est:g02504r /CLONE=g02504 /UG=Hs.119325 Huntingtin-interacting protein A </td> <td> AA675900 </td> <td> PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) </td> <td> PRPF40A </td> <td> 55660 </td> <td> NM_017892 /// XM_005246676 /// XM_005246677 /// XM_005246678 /// XM_005246679 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from electronic annotation </td> <td> -42.45 </td> <td> 228.10 </td> <td> -3.54 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202347_s_at </td> <td> 202347_s_at </td> <td> AB022435 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB022435.1 /DEF=Homo sapiens LIG mRNA for E2 ubiquitin-conjugating enzyme, complete cds.  /FEA=mRNA /GEN=LIG /PROD=E2 ubiquitin-conjugating enzyme /DB_XREF=gi:4996607 /UG=Hs.155485 huntingtin interacting protein 2 /FL=gb:NM_005339.2 gb:U58522.1 gb:AB022435.1 </td> <td> AB022435 </td> <td> ubiquitin-conjugating enzyme E2K </td> <td> UBE2K </td> <td> 3093 </td> <td> NM_001111112 /// NM_001111113 /// NM_005339 </td> <td> 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from direct assay </td> <td> -46.57 </td> <td> 251.59 </td> <td> -3.54 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200735_x_at </td> <td> 200735_x_at </td> <td> NM_005594 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005594.1 /DEF=Homo sapiens nascent-polypeptide-associated complex alpha polypeptide (NACA), mRNA.  /FEA=mRNA /GEN=NACA /PROD=nascent-polypeptide-associated complex alphapolypeptide /DB_XREF=gi:5031930 /UG=Hs.32916 nascent-polypeptide-associated complex alpha polypeptide /FL=gb:AF054187.1 gb:NM_005594.1 </td> <td> NM_005594 </td> <td> nascent polypeptide-associated complex alpha subunit </td> <td> NACA </td> <td> 4666 </td> <td> NM_001113201 /// NM_001113202 /// NM_001113203 /// NM_005594 /// NR_045277 /// XM_006719412 /// XM_006719413 /// XM_006719414 /// XM_006719415 /// XM_006719416 /// XM_006719417 /// XM_006719418 /// XM_006719419 /// XM_006719420 /// XM_006719421 </td> <td> 0003231 // cardiac ventricle development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0010664 // negative regulation of striated muscle cell apoptotic process // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0043403 // skeletal muscle tissue regeneration // inferred from sequence or structural similarity /// 0048633 // positive regulation of skeletal muscle tissue growth // inferred from sequence or structural similarity /// 0048742 // regulation of skeletal muscle fiber development // inferred from sequence or structural similarity /// 0061384 // heart trabecula morphogenesis // inferred from sequence or structural similarity /// 1901227 // negative regulation of transcription from RNA polymerase II promoter involved in heart development // inferred from sequence or structural similarity /// 1901228 // positive regulation of transcription from RNA polymerase II promoter involved in heart development // inferred from sequence or structural similarity /// 2000138 // positive regulation of cell proliferation involved in heart morphogenesis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005854 // nascent polypeptide-associated complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0017025 // TBP-class protein binding // inferred from sequence or structural similarity </td> <td> -265.40 </td> <td> 2256.10 </td> <td> -3.53 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212176_at </td> <td> 212176_at </td> <td> AA902326 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA902326 /FEA=EST /DB_XREF=gi:3037233 /DB_XREF=est:ok92b01.s1 /CLONE=IMAGE:1521385 /UG=Hs.18368 DKFZP564B0769 protein </td> <td> AA902326 </td> <td> PNN-interacting serine/arginine-rich protein </td> <td> PNISR </td> <td> 25957 </td> <td> NM_015491 /// NM_032870 /// XM_005266912 /// XM_005266913 /// XM_005266914 /// XM_005266915 /// XM_005266916 /// XM_005266917 /// XM_006715450 /// XM_006715451 /// XM_006715452 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 50.17 </td> <td> 67.24 </td> <td> 3.53 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 217736_s_at </td> <td> 217736_s_at </td> <td> NM_014413 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014413.2 /DEF=Homo sapiens heme-regulated initiation factor 2-alpha kinase (HRI), mRNA.  /FEA=mRNA /GEN=HRI /PROD=heme-regulated initiation factor 2-alpha kinase /DB_XREF=gi:11125767 /UG=Hs.258730 heme-regulated initiation factor 2-alpha kinase /FL=gb:NM_014413.2 gb:AL136563.1 gb:AF147094.1 gb:AF255050.1 gb:AF116634.1 gb:AF183414.1 </td> <td> NM_014413 </td> <td> eukaryotic translation initiation factor 2-alpha kinase 1 </td> <td> EIF2AK1 </td> <td> 27102 </td> <td> NM_001134335 /// NM_014413 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from expression pattern /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0010999 // regulation of eIF2 alpha phosphorylation by heme // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0045993 // negative regulation of translational initiation by iron // non-traceable author statement /// 0046501 // protoporphyrinogen IX metabolic process // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0046984 // regulation of hemoglobin biosynthetic process // inferred from electronic annotation /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from sequence or structural similarity /// 0060510 // Type II pneumocyte differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity </td> <td> 107.27 </td> <td> 433.46 </td> <td> 3.53 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201118_at </td> <td> 201118_at </td> <td> NM_002631 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002631.1 /DEF=Homo sapiens phosphogluconate dehydrogenase (PGD), mRNA. /FEA=mRNA /GEN=PGD /PROD=phosphogluconate dehydrogenase /DB_XREF=gi:4505758 /UG=Hs.75888 phosphogluconate dehydrogenase /FL=gb:BC000368.1 gb:NM_002631.1 gb:U30255.1 </td> <td> NM_002631 </td> <td> phosphogluconate dehydrogenase </td> <td> PGD </td> <td> 5226 </td> <td> NM_002631 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006098 // pentose-phosphate shunt // inferred from sequence or structural similarity /// 0006098 // pentose-phosphate shunt // traceable author statement /// 0009051 // pentose-phosphate shunt, oxidative branch // inferred from direct assay /// 0019322 // pentose biosynthetic process // inferred from electronic annotation /// 0019521 // D-gluconate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004616 // phosphogluconate dehydrogenase (decarboxylating) activity // not recorded /// 0004616 // phosphogluconate dehydrogenase (decarboxylating) activity // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from electronic annotation </td> <td> -94.33 </td> <td> 404.11 </td> <td> -3.53 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209268_at </td> <td> 209268_at </td> <td> AF165513 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF165513.1 /DEF=Homo sapiens vacuolar protein sorting 45 isoform (VPS45) mRNA, complete cds.  /FEA=mRNA /GEN=VPS45 /PROD=vacuolar protein sorting 45 isoform /DB_XREF=gi:9294732 /UG=Hs.6650 vacuolar protein sorting 45B (yeast homolog) /FL=gb:NM_007259.1 gb:AF165513.1 </td> <td> AF165513 </td> <td> vacuolar protein sorting 45 homolog (S. cerevisiae) </td> <td> VPS45 </td> <td> 11311 </td> <td> NM_001279353 /// NM_001279354 /// NM_001279355 /// NM_007259 /// NR_103998 /// XM_006711142 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 44.62 </td> <td> 58.26 </td> <td> 3.53 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218109_s_at </td> <td> 218109_s_at </td> <td> NM_022736 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022736.1 /DEF=Homo sapiens hypothetical protein FLJ14153 (FLJ14153), mRNA. /FEA=mRNA /GEN=FLJ14153 /PROD=hypothetical protein FLJ14153 /DB_XREF=gi:12232392 /UG=Hs.7503 hypothetical protein FLJ14153 /FL=gb:NM_022736.1 gb:AB014732.1 </td> <td> NM_022736 </td> <td> major facilitator superfamily domain containing 1 </td> <td> MFSD1 </td> <td> 64747 </td> <td> NM_001167903 /// NM_001289406 /// NM_001289407 /// NM_022736 /// NR_110328 /// XM_006713730 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 78.22 </td> <td> 210.26 </td> <td> 3.53 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 221036_s_at </td> <td> 221036_s_at </td> <td> NM_031301 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031301.1 /DEF=Homo sapiens hypothetical protein DKFZp564D0372 (DKFZP564D0372), mRNA.  /FEA=mRNA /GEN=DKFZP564D0372 /PROD=hypothetical protein DKFZp564D0372 /DB_XREF=gi:13775223 /FL=gb:NM_031301.1 </td> <td> NM_031301 </td> <td> APH1B gamma secretase subunit </td> <td> APH1B </td> <td> 83464 </td> <td> NM_001145646 /// NM_031301 </td> <td> 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0030133 // transport vesicle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay </td> <td> -32.25 </td> <td> 104.47 </td> <td> -3.53 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 217973_at </td> <td> 217973_at </td> <td> NM_016286 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016286.1 /DEF=Homo sapiens carbonyl reductase (LOC51181), mRNA. /FEA=mRNA /GEN=LOC51181 /PROD=carbonyl reductase /DB_XREF=gi:7705924 /UG=Hs.9857 carbonyl reductase /FL=gb:BC001470.1 gb:AF113123.1 gb:NM_016286.1 </td> <td> NM_016286 </td> <td> dicarbonyl/L-xylulose reductase </td> <td> DCXR </td> <td> 51181 </td> <td> NM_001195218 /// NM_016286 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005997 // xylulose metabolic process // inferred from direct assay /// 0006006 // glucose metabolic process // inferred from direct assay /// 0006739 // NADP metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0042732 // D-xylose metabolic process // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005902 // microvillus // inferred from electronic annotation /// 0005903 // brush border // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors // inferred from electronic annotation /// 0016655 // oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor // inferred from direct assay /// 0050038 // L-xylulose reductase (NADP+) activity // inferred from direct assay </td> <td> 41.05 </td> <td> 138.12 </td> <td> 3.53 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218187_s_at </td> <td> 218187_s_at </td> <td> NM_023080 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_023080.1 /DEF=Homo sapiens hypothetical protein FLJ20989 (FLJ20989), mRNA. /FEA=mRNA /GEN=FLJ20989 /PROD=hypothetical protein FLJ20989 /DB_XREF=gi:12751496 /UG=Hs.169615 hypothetical protein FLJ20989 /FL=gb:NM_023080.1 </td> <td> NM_023080 </td> <td> chromosome 8 open reading frame 33 </td> <td> C8orf33 </td> <td> 65265 </td> <td> NM_023080 </td> <td>  </td> <td>  </td> <td>  </td> <td> 35.95 </td> <td> 75.05 </td> <td> 3.53 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201770_at </td> <td> 201770_at </td> <td> NM_004596 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004596.1 /DEF=Homo sapiens small nuclear ribonucleoprotein polypeptide A (SNRPA), mRNA.  /FEA=mRNA /GEN=SNRPA /PROD=small nuclear ribonucleoprotein polypeptide A /DB_XREF=gi:4759155 /UG=Hs.173255 small nuclear ribonucleoprotein polypeptide A /FL=gb:BC000405.1 gb:NM_004596.1 </td> <td> NM_004596 </td> <td> small nuclear ribonucleoprotein polypeptide A </td> <td> SNRPA </td> <td> 6626 </td> <td> NM_004596 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005685 // U1 snRNP // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017069 // snRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 89.67 </td> <td> 229.61 </td> <td> 3.53 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 204587_at </td> <td> 204587_at </td> <td> NM_003951 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003951.2 /DEF=Homo sapiens solute carrier family 25 (mitochondrial carrier, brain), member 14 (SLC25A14), transcript variant long, nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=SLC25A14 /PROD=solute carrier family 25, member 14, isoformUCP5L /DB_XREF=gi:6006039 /UG=Hs.194686 solute carrier family 25 (mitochondrial carrier, brain), member 14 /FL=gb:AF155809.1 gb:AF155811.1 gb:NM_022810.1 gb:AF078544.1 gb:NM_003951.2 </td> <td> NM_003951 </td> <td> solute carrier family 25 (mitochondrial carrier, brain), member 14 </td> <td> SLC25A14 </td> <td> 9016 </td> <td> NM_001282195 /// NM_001282196 /// NM_001282197 /// NM_001282198 /// NM_003951 /// NM_022810 /// NR_104107 /// XM_005262485 /// XM_005262488 /// XM_005262489 /// XM_006724786 /// XM_006724787 /// XM_006724788 /// XM_006724789 /// XR_244526 /// XR_430549 /// XR_430550 </td> <td> 0006810 // transport // traceable author statement /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement </td> <td> 0005739 // mitochondrion // traceable author statement /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td>  </td> <td> 36.43 </td> <td> 58.79 </td> <td> 3.53 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 210646_x_at </td> <td> 210646_x_at </td> <td> BC001675 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001675.1 /DEF=Homo sapiens, ribosomal protein L13a, clone MGC:2546, mRNA, complete cds.  /FEA=mRNA /PROD=ribosomal protein L13a /DB_XREF=gi:12804528 /UG=Hs.119122 ribosomal protein L13a /FL=gb:BC001675.1 gb:BC001836.1 </td> <td> BC001675 </td> <td> ribosomal protein L13a /// ribosomal protein L13a pseudogene 5 /// small nucleolar RNA, C/D box 32A /// small nucleolar RNA, C/D box 33 /// small nucleolar RNA, C/D box 34 /// small nucleolar RNA, C/D box 35A </td> <td> RPL13A /// RPL13AP5 /// SNORD32A /// SNORD33 /// SNORD34 /// SNORD35A </td> <td> 23521 /// 26816 /// 26817 /// 26818 /// 26819 /// 728658 </td> <td> NM_001270491 /// NM_012423 /// NR_000018 /// NR_000019 /// NR_000020 /// NR_000021 /// NR_026712 /// NR_073024 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071346 // cellular response to interferon-gamma // inferred from direct assay /// 1901194 // negative regulation of formation of translation preinitiation complex // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015934 // large ribosomal subunit // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1137.35 </td> <td> 5445.03 </td> <td> -3.53 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200833_s_at </td> <td> 200833_s_at </td> <td> NM_015646 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015646.1 /DEF=Homo sapiens RAP1B, member of RAS oncogene family (RAP1B), mRNA. /FEA=mRNA /GEN=RAP1B /PROD=DKFZP586H0723 protein /DB_XREF=gi:7661677 /UG=Hs.156764 RAP1B, member of RAS oncogene family /FL=gb:BC000176.2 gb:NM_015646.1 </td> <td> NM_015646 </td> <td> RAP1B, member of RAS oncogene family </td> <td> RAP1B </td> <td> 5908 </td> <td> NM_001010942 /// NM_001251917 /// NM_001251918 /// NM_001251921 /// NM_001251922 /// NM_015646 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0032486 // Rap protein signal transduction // inferred from mutant phenotype /// 0032854 // positive regulation of Rap GTPase activity // inferred from electronic annotation /// 0038180 // nerve growth factor signaling pathway // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0061028 // establishment of endothelial barrier // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from direct assay /// 1901888 // regulation of cell junction assembly // inferred from mutant phenotype /// 1990090 // cellular response to nerve growth factor stimulus // inferred from electronic annotation /// 2000114 // regulation of establishment of cell polarity // inferred from mutant phenotype /// 2001214 // positive regulation of vasculogenesis // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0032045 // guanyl-nucleotide exchange factor complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0017016 // Ras GTPase binding // inferred from electronic annotation /// 0017034 // Rap guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay /// 0032403 // protein complex binding // inferred from direct assay </td> <td> -185.53 </td> <td> 966.41 </td> <td> -3.53 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 222275_at </td> <td> 222275_at </td> <td> AI039469 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI039469 /FEA=EST /DB_XREF=gi:3278663 /DB_XREF=est:ox41a08.s1 /CLONE=IMAGE:1658870 /UG=Hs.27362 ESTs </td> <td> AI039469 </td> <td> mitochondrial ribosomal protein S30 </td> <td> MRPS30 </td> <td> 10884 </td> <td> NM_016640 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 31.18 </td> <td> 35.74 </td> <td> 3.52 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208374_s_at </td> <td> 208374_s_at </td> <td> NM_006135 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006135.1 /DEF=Homo sapiens capping protein (actin filament) muscle Z-line, alpha 1 (CAPZA1), mRNA.  /FEA=mRNA /GEN=CAPZA1 /PROD=F-actin capping protein alpha-1 subunit /DB_XREF=gi:5453596 /UG=Hs.184270 capping protein (actin filament) muscle Z-line, alpha 1 /FL=gb:U56637.1 gb:NM_006135.1 </td> <td> NM_006135 </td> <td> capping protein (actin filament) muscle Z-line, alpha 1 </td> <td> CAPZA1 </td> <td> 829 </td> <td> NM_006135 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0008290 // F-actin capping protein complex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071203 // WASH complex // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 89.42 </td> <td> 767.16 </td> <td> 3.52 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 217729_s_at </td> <td> 217729_s_at </td> <td> NM_001130 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001130.3 /DEF=Homo sapiens amino-terminal enhancer of split (AES), mRNA. /FEA=mRNA /GEN=AES /PROD=amino-terminal enhancer of split /DB_XREF=gi:6382065 /UG=Hs.244 amino-terminal enhancer of split /FL=gb:AF072902.1 gb:U04241.1 gb:NM_001130.3 </td> <td> NM_001130 </td> <td> amino-terminal enhancer of split </td> <td> AES </td> <td> 166 </td> <td> NM_001130 /// NM_198969 /// NM_198970 /// XM_006722664 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0010629 // negative regulation of gene expression // inferred from mutant phenotype /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0060761 // negative regulation of response to cytokine stimulus // inferred from mutant phenotype /// 0070555 // response to interleukin-1 // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from direct assay /// 2000210 // positive regulation of anoikis // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction </td> <td> 47.40 </td> <td> 109.00 </td> <td> 3.52 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202098_s_at </td> <td> 202098_s_at </td> <td> NM_001535 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001535.1 /DEF=Homo sapiens HMT1 (hnRNP methyltransferase, S. cerevisiae)-like 1 (HRMT1L1), mRNA.  /FEA=mRNA /GEN=HRMT1L1 /PROD=HMT1 (hnRNP methyltransferase, S.cerevisiae)-like 1 /DB_XREF=gi:4504494 /UG=Hs.235887 HMT1 (hnRNP methyltransferase, S. cerevisiae)-like 1 /FL=gb:U80213.1 gb:NM_001535.1 </td> <td> NM_001535 </td> <td> protein arginine methyltransferase 2 </td> <td> PRMT2 </td> <td> 3275 </td> <td> NM_001242864 /// NM_001242865 /// NM_001242866 /// NM_001286676 /// NM_001286677 /// NM_001286678 /// NM_001535 /// NM_206962 /// XM_005261111 /// XM_006723998 /// XM_006723999 /// XM_006724000 </td> <td> 0006479 // protein methylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016571 // histone methylation // inferred from direct assay /// 0016571 // histone methylation // inferred from sequence or structural similarity /// 0019919 // peptidyl-arginine methylation, to asymmetrical-dimethyl arginine // not recorded /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation /// 0034969 // histone arginine methylation // not recorded /// 0035246 // peptidyl-arginine N-methylation // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from genetic interaction /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0048588 // developmental cell growth // inferred from sequence or structural similarity /// 0060765 // regulation of androgen receptor signaling pathway // inferred from direct assay /// 0097194 // execution phase of apoptosis // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0035189 // Rb-E2F complex // inferred from sequence or structural similarity </td> <td> 0003713 // transcription coactivator activity // inferred from direct assay /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0008469 // histone-arginine N-methyltransferase activity // not recorded /// 0008469 // histone-arginine N-methyltransferase activity // inferred from sequence or structural similarity /// 0016274 // protein-arginine N-methyltransferase activity // inferred from sequence or structural similarity /// 0016740 // transferase activity // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0030331 // estrogen receptor binding // inferred from physical interaction /// 0033142 // progesterone receptor binding // inferred from physical interaction /// 0035242 // protein-arginine omega-N asymmetric methyltransferase activity // not recorded /// 0042054 // histone methyltransferase activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042975 // peroxisome proliferator activated receptor binding // inferred from physical interaction /// 0046966 // thyroid hormone receptor binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction </td> <td> -44.65 </td> <td> 185.55 </td> <td> -3.51 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 214062_x_at </td> <td> 214062_x_at </td> <td> AI684894 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI684894 /FEA=EST /DB_XREF=gi:4896188 /DB_XREF=est:wa86h04.x1 /CLONE=IMAGE:2303095 /UG=Hs.9731 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta </td> <td> AI684894 </td> <td> nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta </td> <td> NFKBIB </td> <td> 4793 </td> <td> NM_001001716 /// NM_001243116 /// NM_002503 /// NR_040515 /// XM_006723226 /// XM_006723227 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003713 // transcription coactivator activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -41.62 </td> <td> 38.96 </td> <td> -3.51 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 207827_x_at </td> <td> 207827_x_at </td> <td> L36675 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L36675.1 /DEF=Human (clone 2-4) synuclein (NACP) mRNA, complete cds. /FEA=mRNA /GEN=NACP /PROD=synuclein /DB_XREF=gi:556213 /UG=Hs.76930 synuclein, alpha (non A4 component of amyloid precursor) /FL=gb:L36675.1 gb:D31839.1 gb:NM_007308.1 </td> <td> L36675 </td> <td> synuclein, alpha (non A4 component of amyloid precursor) </td> <td> SNCA </td> <td> 6622 </td> <td> NM_000345 /// NM_001146054 /// NM_001146055 /// NM_007308 </td> <td> 0001774 // microglial cell activation // inferred from electronic annotation /// 0001921 // positive regulation of receptor recycling // inferred from direct assay /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001956 // positive regulation of neurotransmitter secretion // inferred from electronic annotation /// 0001963 // synaptic transmission, dopaminergic // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006638 // neutral lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007006 // mitochondrial membrane organization // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0010040 // response to iron(II) ion // inferred from direct assay /// 0010517 // regulation of phospholipase activity // inferred from direct assay /// 0010642 // negative regulation of platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0014048 // regulation of glutamate secretion // inferred from electronic annotation /// 0014059 // regulation of dopamine secretion // traceable author statement /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0031623 // receptor internalization // inferred from direct assay /// 0031648 // protein destabilization // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from direct assay /// 0032410 // negative regulation of transporter activity // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032769 // negative regulation of monooxygenase activity // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from direct assay /// 0034599 // cellular response to oxidative stress // inferred from electronic annotation /// 0035067 // negative regulation of histone acetylation // inferred from direct assay /// 0040012 // regulation of locomotion // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042416 // dopamine biosynthetic process // traceable author statement /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042775 // mitochondrial ATP synthesis coupled electron transport // inferred from electronic annotation /// 0043030 // regulation of macrophage activation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043206 // extracellular fibril organization // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from direct assay /// 0045920 // negative regulation of exocytosis // inferred from mutant phenotype /// 0045963 // negative regulation of dopamine metabolic process // inferred from electronic annotation /// 0046928 // regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048148 // behavioral response to cocaine // inferred from electronic annotation /// 0048168 // regulation of neuronal synaptic plasticity // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048488 // synaptic vesicle endocytosis // inferred from sequence or structural similarity /// 0048489 // synaptic vesicle transport // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0050812 // regulation of acyl-CoA biosynthetic process // inferred from electronic annotation /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051583 // dopamine uptake involved in synaptic transmission // traceable author statement /// 0051585 // negative regulation of dopamine uptake involved in synaptic transmission // inferred from direct assay /// 0051612 // negative regulation of serotonin uptake // inferred from direct assay /// 0051622 // negative regulation of norepinephrine uptake // inferred from direct assay /// 0055074 // calcium ion homeostasis // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0060732 // positive regulation of inositol phosphate biosynthetic process // inferred from direct assay /// 0070495 // negative regulation of thrombin receptor signaling pathway // inferred from direct assay /// 0070555 // response to interleukin-1 // inferred from direct assay /// 0071280 // cellular response to copper ion // inferred from direct assay /// 0071872 // cellular response to epinephrine stimulus // traceable author statement /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 1901214 // regulation of neuron death // inferred from genetic interaction </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016234 // inclusion body // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030426 // growth cone // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // inferred from direct assay /// 0043195 // terminal bouton // inferred from electronic annotation /// 0043205 // fibril // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0005504 // fatty acid binding // inferred from direct assay /// 0005507 // copper ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008198 // ferrous iron binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0019894 // kinesin binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0043014 // alpha-tubulin binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0045502 // dynein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0050544 // arachidonic acid binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from direct assay /// 0060961 // phospholipase D inhibitor activity // inferred from direct assay </td> <td> 47.88 </td> <td> 138.36 </td> <td> 3.51 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218334_at </td> <td> 218334_at </td> <td> NM_025075 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025075.1 /DEF=Homo sapiens hypothetical protein FLJ23445 (FLJ23445), mRNA. /FEA=mRNA /GEN=FLJ23445 /PROD=hypothetical protein FLJ23445 /DB_XREF=gi:13376622 /UG=Hs.288151 hypothetical protein FLJ23445 /FL=gb:NM_025075.1 </td> <td> NM_025075 </td> <td> THO complex 7 homolog (Drosophila) </td> <td> THOC7 </td> <td> 80145 </td> <td> NM_001285387 /// NM_001285404 /// NM_025075 /// XM_006713339 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0046784 // viral mRNA export from host cell nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0000346 // transcription export complex // inferred from direct assay /// 0000347 // THO complex // inferred from direct assay /// 0000445 // THO complex part of transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 50.55 </td> <td> 155.50 </td> <td> 3.51 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201536_at </td> <td> 201536_at </td> <td> AL048503 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL048503 /FEA=EST /DB_XREF=gi:5936534 /DB_XREF=est:DKFZp586M1524_s1 /CLONE=DKFZp586M1524 /UG=Hs.181046 dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) /FL=gb:BC002682.1 gb:L05147.1 gb:NM_004090.1 </td> <td> AL048503 </td> <td> dual specificity phosphatase 3 </td> <td> DUSP3 </td> <td> 1845 </td> <td> NM_004090 </td> <td> 0000188 // inactivation of MAPK activity // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043409 // negative regulation of MAPK cascade // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from direct assay /// 0046329 // negative regulation of JNK cascade // inferred from mutant phenotype /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from direct assay /// 0050868 // negative regulation of T cell activation // inferred from direct assay /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from direct assay </td> <td> 0001772 // immunological synapse // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from direct assay /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from mutant phenotype /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0033549 // MAP kinase phosphatase activity // inferred from mutant phenotype </td> <td> 45.42 </td> <td> 91.24 </td> <td> 3.50 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218810_at </td> <td> 218810_at </td> <td> NM_025079 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025079.1 /DEF=Homo sapiens hypothetical protein FLJ23231 (FLJ23231), mRNA. /FEA=mRNA /GEN=FLJ23231 /PROD=hypothetical protein FLJ23231 /DB_XREF=gi:13376631 /UG=Hs.288300 hypothetical protein FLJ23231 /FL=gb:NM_025079.1 gb:BC005001.1 </td> <td> NM_025079 </td> <td> microRNA 6732 /// zinc finger CCCH-type containing 12A </td> <td> MIR6732 /// ZC3H12A </td> <td> 80149 /// 102465438 </td> <td> NM_025079 /// NR_106790 /// XM_005271226 /// XM_005271227 /// XM_006710925 /// XM_006710926 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010508 // positive regulation of autophagy // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0010884 // positive regulation of lipid storage // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0032720 // negative regulation of tumor necrosis factor production // inferred from direct assay /// 0043031 // negative regulation of macrophage activation // inferred by curator /// 0045019 // negative regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0045600 // positive regulation of fat cell differentiation // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -38.20 </td> <td> 75.33 </td> <td> -3.50 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202546_at </td> <td> 202546_at </td> <td> NM_003761 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003761.1 /DEF=Homo sapiens vesicle-associated membrane protein 8 (endobrevin) (VAMP8), mRNA.  /FEA=mRNA /GEN=VAMP8 /PROD=vesicle-associated membrane protein 8 /DB_XREF=gi:4507864 /UG=Hs.172684 vesicle-associated membrane protein 8 (endobrevin) /FL=gb:BC001634.1 gb:AF053233.1 gb:NM_003761.1 </td> <td> NM_003761 </td> <td> vesicle-associated membrane protein 8 </td> <td> VAMP8 </td> <td> 8673 </td> <td> NM_003761 </td> <td> 0000046 // autophagic vacuole fusion // inferred from mutant phenotype /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // not recorded /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // not recorded /// 0006906 // vesicle fusion // not recorded /// 0006914 // autophagy // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0046718 // viral entry into host cell // inferred from mutant phenotype /// 0061024 // membrane organization // traceable author statement /// 0061025 // membrane fusion // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030667 // secretory granule membrane // traceable author statement /// 0031201 // SNARE complex // inferred from direct assay /// 0031902 // late endosome membrane // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000149 // SNARE binding // not recorded /// 0005484 // SNAP receptor activity // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from electronic annotation </td> <td> 46.00 </td> <td> 128.30 </td> <td> 3.50 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212055_at </td> <td> 212055_at </td> <td> BF689173 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF689173 /FEA=EST /DB_XREF=gi:11974581 /DB_XREF=est:602184834T1 /CLONE=IMAGE:4299201 /UG=Hs.22981 DKFZP586M1523 protein </td> <td> BF689173 </td> <td> tubulin polyglutamylase complex subunit 2 </td> <td> TPGS2 </td> <td> 25941 </td> <td> NM_001271949 /// NM_001271950 /// NM_001271951 /// NM_001271952 /// NM_001271953 /// NM_001271954 /// NM_001271955 /// NM_001271956 /// NM_015476 /// XM_005258242 /// XR_243849 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation </td> <td>  </td> <td> 38.80 </td> <td> 283.82 </td> <td> 3.50 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212643_at </td> <td> 212643_at </td> <td> AI671747 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI671747 /FEA=EST /DB_XREF=gi:4851478 /DB_XREF=est:wa05e06.x1 /CLONE=IMAGE:2297218 /UG=Hs.81360 Homo sapiens cDNA: FLJ21927 fis, clone HEP04178, highly similar to HSU90909 Human clone 23722 mRNA sequence </td> <td> AI671747 </td> <td> mitogen-activated protein kinase 1 interacting protein 1-like </td> <td> MAPK1IP1L </td> <td> 93487 </td> <td> NM_144578 </td> <td>  </td> <td>  </td> <td>  </td> <td> 247.80 </td> <td> 850.38 </td> <td> 3.50 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 215136_s_at </td> <td> 215136_s_at </td> <td> AL050353 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL050353.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564C0482 (from clone DKFZp564C0482). /FEA=mRNA /DB_XREF=gi:4914574 /UG=Hs.274170 Opa-interacting protein 2 </td> <td> AL050353 </td> <td> exosome component 8 </td> <td> EXOSC8 </td> <td> 11340 </td> <td> NM_181503 /// XM_006719763 /// XR_429212 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006364 // rRNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement </td> <td> 0000178 // exosome (RNase complex) // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0004532 // exoribonuclease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017091 // AU-rich element binding // inferred from direct assay </td> <td> -34.70 </td> <td> 131.55 </td> <td> -3.50 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209123_at </td> <td> 209123_at </td> <td> BC000576 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000576.1 /DEF=Homo sapiens, quinoid dihydropteridine reductase, clone MGC:1657, mRNA, complete cds.  /FEA=mRNA /PROD=quinoid dihydropteridine reductase /DB_XREF=gi:12653600 /UG=Hs.75438 quinoid dihydropteridine reductase /FL=gb:BC000576.1 gb:M16447.1 gb:NM_000320.1 </td> <td> BC000576 </td> <td> quinoid dihydropteridine reductase </td> <td> QDPR </td> <td> 5860 </td> <td> NM_000320 /// XR_241677 </td> <td> 0001889 // liver development // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006559 // L-phenylalanine catabolic process // traceable author statement /// 0006729 // tetrahydrobiopterin biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010044 // response to aluminum ion // inferred from electronic annotation /// 0010288 // response to lead ion // inferred from electronic annotation /// 0033762 // response to glucagon // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051066 // dihydrobiopterin metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043005 // neuron projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004155 // 6,7-dihydropteridine reductase activity // not recorded /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation /// 0070404 // NADH binding // inferred from electronic annotation </td> <td> 78.95 </td> <td> 148.38 </td> <td> 3.50 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208872_s_at </td> <td> 208872_s_at </td> <td> AA814140 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA814140 /FEA=EST /DB_XREF=gi:2883736 /DB_XREF=est:ob25c08.s1 /CLONE=IMAGE:1324718 /UG=Hs.178112 DNA segment, single copy probe LNS-CAILNS-CAII (deleted in polyposis /FL=gb:BC000232.1 </td> <td> AA814140 </td> <td> receptor accessory protein 5 </td> <td> REEP5 </td> <td> 7905 </td> <td> NM_005669 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -151.70 </td> <td> 523.62 </td> <td> -3.49 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 213677_s_at </td> <td> 213677_s_at </td> <td> BG434893 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG434893 /FEA=EST /DB_XREF=gi:13341399 /DB_XREF=est:602507842F1 /CLONE=IMAGE:4604891 /UG=Hs.111749 postmeiotic segregation increased (S. cerevisiae) 1 </td> <td> BG434893 </td> <td> PMS1 postmeiotic segregation increased 1 (S. cerevisiae) </td> <td> PMS1 </td> <td> 5378 </td> <td> NM_000534 /// NM_001128143 /// NM_001128144 /// NM_001289408 /// NM_001289409 /// NR_110332 /// XM_005246647 /// XM_005246649 /// XM_006712596 </td> <td> 0006200 // ATP catabolic process // not recorded /// 0006281 // DNA repair // inferred from electronic annotation /// 0006298 // mismatch repair // not recorded /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination //  /// 0042493 // response to drug // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0032300 // mismatch repair complex //  /// 0032389 // MutLalpha complex // not recorded </td> <td> 0003677 // DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // not recorded /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // not recorded /// 0030983 // mismatched DNA binding // inferred from electronic annotation /// 0032407 // MutSalpha complex binding // </td> <td> 38.77 </td> <td> 107.44 </td> <td> 3.49 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 205347_s_at </td> <td> 205347_s_at </td> <td> NM_021992 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021992.1 /DEF=Homo sapiens thymosin, beta, identified in neuroblastoma cells (TMSNB), mRNA.  /FEA=mRNA /GEN=TMSNB /PROD=thymosin, beta, identified in neuroblastomacells /DB_XREF=gi:11496272 /UG=Hs.56145 thymosin, beta, identified in neuroblastoma cells /FL=gb:NM_021992.1 gb:BC000183.1 gb:D82345.1 </td> <td> NM_021992 </td> <td> thymosin beta 15a /// thymosin beta 15B </td> <td> TMSB15A /// TMSB15B </td> <td> 11013 /// 286527 </td> <td> NM_021992 /// NM_194324 </td> <td> 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0042989 // sequestering of actin monomers // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation </td> <td> 40.15 </td> <td> 91.62 </td> <td> 3.49 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 51200_at </td> <td> 51200_at </td> <td> AI744084 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI744084:wc36b05.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2317233 /clone_end=3' /gb=AI744084 /gi=5112372 /ug=Hs.30783 /len=524 </td> <td> AI744084 </td> <td> chromosome 19 open reading frame 60 </td> <td> C19orf60 </td> <td> 55049 </td> <td> NM_001100418 /// NM_001100419 /// NM_017967 /// XM_005259977 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 37.72 </td> <td> 148.61 </td> <td> 3.49 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202122_s_at </td> <td> 202122_s_at </td> <td> NM_005817 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005817.1 /DEF=Homo sapiens cargo selection protein (mannose 6 phosphate receptor binding protein) (TIP47), mRNA.  /FEA=mRNA /GEN=TIP47 /PROD=cargo selection protein (mannose 6 phosphatereceptor binding protein) /DB_XREF=gi:5032182 /UG=Hs.140452 cargo selection protein (mannose 6 phosphate receptor binding protein) /FL=gb:AF057140.1 gb:AF051314.1 gb:AF051315.1 gb:AF055574.1 gb:NM_005817.1 </td> <td> NM_005817 </td> <td> perilipin 3 </td> <td> PLIN3 </td> <td> 10226 </td> <td> NM_001164189 /// NM_001164194 /// NM_005817 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005811 // lipid particle // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 42.53 </td> <td> 167.19 </td> <td> 3.49 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212408_at </td> <td> 212408_at </td> <td> AK023204 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK023204.1 /DEF=Homo sapiens cDNA FLJ13142 fis, clone NT2RP3003212, moderately similar to Rattus norvegicus lamina associated polypeptide 1C (LAP1C) mRNA.  /FEA=mRNA /DB_XREF=gi:10435025 /UG=Hs.234265 DKFZP586G011 protein </td> <td> AK023204 </td> <td> torsin A interacting protein 1 </td> <td> TOR1AIP1 </td> <td> 26092 </td> <td> NM_001267578 /// NM_015602 /// NM_032678 </td> <td> 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0071763 // nuclear membrane organization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0001671 // ATPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0005521 // lamin binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0051117 // ATPase binding // inferred from physical interaction </td> <td> 68.95 </td> <td> 223.88 </td> <td> 3.49 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209122_at </td> <td> 209122_at </td> <td> BC005127 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005127.1 /DEF=Homo sapiens, adipose differentiation-related protein, clone MGC:10598, mRNA, complete cds.  /FEA=mRNA /PROD=adipose differentiation-related protein /DB_XREF=gi:13477306 /UG=Hs.3416 adipose differentiation-related protein /FL=gb:BC005127.1 gb:NM_001122.1 </td> <td> BC005127 </td> <td> perilipin 2 </td> <td> PLIN2 </td> <td> 123 </td> <td> NM_001122 /// NR_038064 /// XM_006716719 </td> <td> 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0015909 // long-chain fatty acid transport // inferred from electronic annotation /// 0019915 // lipid storage // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005811 // lipid particle // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -66.08 </td> <td> 187.46 </td> <td> -3.49 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 207508_at </td> <td> 207508_at </td> <td> NM_001689 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001689.1 /DEF=Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9) isoform 3 (ATP5G3), mRNA.  /FEA=mRNA /GEN=ATP5G3 /PROD=ATP synthase, H+ transporting, mitochondrial F0complex, subunit c (subunit 9) isoform 3 /DB_XREF=gi:4502300 /UG=Hs.429 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9) isoform 3 /FL=gb:U09813.1 gb:NM_001689.1 </td> <td> NM_001689 </td> <td> ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) </td> <td> ATP5G3 </td> <td> 518 </td> <td> NM_001002258 /// NM_001190329 /// NM_001689 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation </td> <td> 186.15 </td> <td> 818.52 </td> <td> 3.49 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200686_s_at </td> <td> 200686_s_at </td> <td> NM_004768 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004768.1 /DEF=Homo sapiens splicing factor, arginineserine-rich 11 (SFRS11), mRNA.  /FEA=mRNA /GEN=SFRS11 /PROD=splicing factor, arginineserine-rich 11 /DB_XREF=gi:4759099 /UG=Hs.11482 splicing factor, arginineserine-rich 11 /FL=gb:M74002.1 gb:NM_004768.1 </td> <td> NM_004768 </td> <td> serine/arginine-rich splicing factor 11 </td> <td> SRSF11 </td> <td> 9295 </td> <td> NM_001190987 /// NM_004768 /// XM_005271338 /// XM_005271339 /// XM_006711037 /// XM_006711038 /// XM_006711039 /// XM_006711040 /// XM_006711041 /// XR_426640 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 134.15 </td> <td> 393.23 </td> <td> 3.48 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200005_at </td> <td> 200005_at </td> <td> NM_003753 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003753.1 /DEF=Homo sapiens eukaryotic translation initiation factor 3, subunit 7 (zeta, 6667kD) (EIF3S7), mRNA.  /FEA=mRNA /GEN=EIF3S7 /PROD=eukaryotic translation initiation factor 3,subunit 7 (zeta, 6667kD) /DB_XREF=gi:4503522 /UG=Hs.55682 eukaryotic translation initiation factor 3, subunit 7 (zeta, 6667kD) /FL=gb:BC000328.1 gb:BC000469.1 gb:U54558.1 gb:NM_003753.1 </td> <td> NM_003753 </td> <td> eukaryotic translation initiation factor 3, subunit D </td> <td> EIF3D </td> <td> 8664 </td> <td> NM_003753 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0001732 // formation of translation initiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation </td> <td> 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -175.75 </td> <td> 659.20 </td> <td> -3.48 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201143_s_at </td> <td> 201143_s_at </td> <td> BC002513 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002513.1 /DEF=Homo sapiens, eukaryotic translation initiation factor 2, subunit 1 (alpha, 35kD ), clone MGC:1511, mRNA, complete cds.  /FEA=mRNA /PROD=eukaryotic translation initiation factor 2,subunit 1 (alpha, 35kD ) /DB_XREF=gi:12803384 /UG=Hs.151777 eukaryotic translation initiation factor 2, subunit 1 (alpha, 35kD ) /FL=gb:BC002513.1 gb:J02645.1 gb:NM_004094.1 </td> <td> BC002513 </td> <td> eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa </td> <td> EIF2S1 </td> <td> 1965 </td> <td> NM_004094 </td> <td> 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0043558 // regulation of translational initiation in response to stress // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0046777 // protein autophosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005844 // polysome // traceable author statement /// 0005850 // eukaryotic translation initiation factor 2 complex // inferred from electronic annotation /// 0005851 // eukaryotic translation initiation factor 2B complex // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 58.85 </td> <td> 119.12 </td> <td> 3.48 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212281_s_at </td> <td> 212281_s_at </td> <td> BF038366 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF038366 /FEA=EST /DB_XREF=gi:10744142 /DB_XREF=est:601459338F1 /CLONE=IMAGE:3862808 /UG=Hs.199695 hypothetical protein </td> <td> BF038366 </td> <td> transmembrane protein 97 </td> <td> TMEM97 </td> <td> 27346 </td> <td> NM_014573 /// XM_005257965 </td> <td> 0001558 // regulation of cell growth // non-traceable author statement /// 0042632 // cholesterol homeostasis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 54.12 </td> <td> 107.04 </td> <td> 3.48 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202090_s_at </td> <td> 202090_s_at </td> <td> NM_006830 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006830.1 /DEF=Homo sapiens ubiquinol-cytochrome c reductase (6.4kD) subunit (UQCR), mRNA.  /FEA=mRNA /GEN=UQCR /PROD=ubiquinol-cytochrome c reductase (6.4kD)subunit /DB_XREF=gi:5803216 /UG=Hs.8372 ubiquinol-cytochrome c reductase (6.4kD) subunit /FL=gb:D55636.1 gb:NM_006830.1 </td> <td> NM_006830 </td> <td> ubiquinol-cytochrome c reductase, complex III subunit XI </td> <td> UQCR11 </td> <td> 10975 </td> <td> NM_006830 </td> <td> 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008121 // ubiquinol-cytochrome-c reductase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement </td> <td> 79.68 </td> <td> 619.56 </td> <td> 3.48 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 214697_s_at </td> <td> 214697_s_at </td> <td> AW190873 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW190873 /FEA=EST /DB_XREF=gi:6465353 /DB_XREF=est:xl66a01.x1 /CLONE=IMAGE:2679624 /UG=Hs.145078 regulator of differentiation (in S. pombe) 1 </td> <td> AW190873 </td> <td> polypyrimidine tract binding protein 3 </td> <td> PTBP3 </td> <td> 9991 </td> <td> NM_001163788 /// NM_001163790 /// NM_001244896 /// NM_001244897 /// NM_001244898 /// NM_005156 /// XM_005252324 /// XM_006717343 /// XM_006717344 /// XM_006717345 /// XM_006717346 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0043249 // erythrocyte maturation // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -52.95 </td> <td> 115.75 </td> <td> -3.48 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201201_at </td> <td> 201201_at </td> <td> NM_000100 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000100.1 /DEF=Homo sapiens cystatin B (stefin B) (CSTB), mRNA. /FEA=mRNA /GEN=CSTB /PROD=cystatin B (stefin B) /DB_XREF=gi:4503116 /UG=Hs.695 cystatin B (stefin B) /FL=gb:BC003370.1 gb:L03558.1 gb:NM_000100.1 </td> <td> NM_000100 </td> <td> cystatin B (stefin B) </td> <td> CSTB </td> <td> 1476 </td> <td> NM_000100 </td> <td> 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from direct assay /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004869 // cysteine-type endopeptidase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -170.55 </td> <td> 941.95 </td> <td> -3.48 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 221744_at </td> <td> 221744_at </td> <td> AK026008 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026008.1 /DEF=Homo sapiens cDNA: FLJ22355 fis, clone HRC06344. /FEA=mRNA /DB_XREF=gi:10438707 /UG=Hs.288283 Homo sapiens cDNA: FLJ22355 fis, clone HRC06344 </td> <td> AK026008 </td> <td> DDB1 and CUL4 associated factor 7 </td> <td> DCAF7 </td> <td> 10238 </td> <td> NM_001003725 /// NM_005828 /// NR_073585 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0016363 // nuclear matrix // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0080008 // Cul4-RING E3 ubiquitin ligase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 36.73 </td> <td> 55.16 </td> <td> 3.47 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 216241_s_at </td> <td> 216241_s_at </td> <td> X57198 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X57198.1 /DEF=Human TFIIS mRNA for transcription elongation factor. /FEA=mRNA /GEN=TFIIS /PROD=transcription elongation  factor /DB_XREF=gi:37071 /UG=Hs.78869 transcription elongation factor A (SII), 1 </td> <td> X57198 </td> <td> transcription elongation factor A (SII), 1 </td> <td> TCEA1 </td> <td> 6917 </td> <td> NM_006756 /// NM_201437 /// NR_109901 /// NR_109902 /// XM_006716467 </td> <td> 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0032784 // regulation of DNA-templated transcription, elongation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -107.77 </td> <td> 532.76 </td> <td> -3.47 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212372_at </td> <td> 212372_at </td> <td> AK026977 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026977.1 /DEF=Homo sapiens cDNA: FLJ23324 fis, clone HEP12482, highly similar to HUMMYOHCB Human nonmuscle myosin heavy chain-B (MYH10) mRNA.  /FEA=mRNA /DB_XREF=gi:10439970 /UG=Hs.296842 Homo sapiens, clone IMAGE:3357927, mRNA, partial cds </td> <td> AK026977 </td> <td> myosin, heavy chain 10, non-muscle </td> <td> MYH10 </td> <td> 4628 </td> <td> NM_001256012 /// NM_001256095 /// NM_005964 /// XM_005256651 /// XM_005256652 /// XM_005256653 </td> <td> 0000281 // mitotic cytokinesis // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001778 // plasma membrane repair // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from mutant phenotype /// 0006887 // exocytosis // inferred from electronic annotation /// 0006930 // substrate-dependent cell migration, cell extension // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007512 // adult heart development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0021592 // fourth ventricle development // inferred from electronic annotation /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021678 // third ventricle development // inferred from electronic annotation /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from direct assay /// 0030239 // myofibril assembly // inferred from electronic annotation /// 0031032 // actomyosin structure organization // inferred from mutant phenotype /// 0031175 // neuron projection development // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0055003 // cardiac myofibril assembly // inferred from electronic annotation /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0016459 // myosin complex // non-traceable author statement /// 0016460 // myosin II complex // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0042641 // actomyosin // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0097513 // myosin II filament // inferred from direct assay </td> <td> 0000146 // microfilament motor activity // inferred from direct assay /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // non-traceable author statement /// 0030898 // actin-dependent ATPase activity // inferred from direct assay /// 0030898 // actin-dependent ATPase activity // inferred from mutant phenotype /// 0043531 // ADP binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from mutant phenotype </td> <td> 130.40 </td> <td> 529.50 </td> <td> 3.47 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202132_at </td> <td> 202132_at </td> <td> AA081084 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA081084 /FEA=EST /DB_XREF=gi:1623002 /DB_XREF=est:zn32h12.s1 /CLONE=IMAGE:549191 /UG=Hs.24341 transcriptional co-activator with PDZ-binding motif (TAZ) /FL=gb:NM_015472.1 </td> <td> AA081084 </td> <td> WW domain containing transcription regulator 1 </td> <td> WWTR1 </td> <td> 25937 </td> <td> NM_001168278 /// NM_001168280 /// NM_015472 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0017145 // stem cell division // inferred from direct assay /// 0032835 // glomerulus development // inferred from electronic annotation /// 0035329 // hippo signaling // inferred from direct assay /// 0035329 // hippo signaling // traceable author statement /// 0035414 // negative regulation of catenin import into nucleus // inferred from mutant phenotype /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0060271 // cilium morphogenesis // inferred from electronic annotation /// 0060390 // regulation of SMAD protein import into nucleus // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation </td> <td> 65.47 </td> <td> 199.61 </td> <td> 3.47 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209717_at </td> <td> 209717_at </td> <td> AF008915 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF008915.1 /DEF=Homo sapiens EVI5 homolog mRNA, complete cds. /FEA=mRNA /PROD=EVI-5 homolog /DB_XREF=gi:3093475 /UG=Hs.179747 ecotropic viral integration site 5 /FL=gb:AF008915.1 </td> <td> AF008915 </td> <td> ecotropic viral integration site 5 </td> <td> EVI5 </td> <td> 7813 </td> <td> NM_005665 /// XM_005271179 /// XM_005271180 /// XM_005271182 /// XM_006710884 /// XM_006710885 /// XM_006710886 /// XM_006710887 /// XM_006710888 /// XM_006710889 /// XM_006710890 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 37.48 </td> <td> 61.14 </td> <td> 3.47 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201423_s_at </td> <td> 201423_s_at </td> <td> AL037208 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL037208 /FEA=EST /DB_XREF=gi:5406648 /DB_XREF=est:DKFZp564B1169_s1 /CLONE=DKFZp564B1169 /UG=Hs.183874 cullin 4A /FL=gb:NM_003589.1 gb:AF077188.1 </td> <td> AL037208 </td> <td> cullin 4A </td> <td> CUL4A </td> <td> 8451 </td> <td> NM_001008895 /// NM_001278513 /// NM_001278514 /// NM_003589 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007346 // regulation of mitotic cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0051246 // regulation of protein metabolic process // inferred from electronic annotation /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900087 // positive regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation </td> <td> 0031461 // cullin-RING ubiquitin ligase complex // inferred from electronic annotation /// 0031464 // Cul4A-RING E3 ubiquitin ligase complex // inferred from direct assay /// 0080008 // Cul4-RING E3 ubiquitin ligase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation </td> <td> -36.43 </td> <td> 174.81 </td> <td> -3.47 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208642_s_at </td> <td> 208642_s_at </td> <td> AA205834 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA205834 /FEA=EST /DB_XREF=gi:1801206 /DB_XREF=est:zq53g12.s1 /CLONE=IMAGE:645382 /UG=Hs.84981 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining; Ku autoantigen, 80kD) /FL=gb:NM_021141.2 gb:J04977.1 gb:M30938.1 </td> <td> AA205834 </td> <td> X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) </td> <td> XRCC5 </td> <td> 7520 </td> <td> NM_021141 /// XM_005246836 /// XM_005246837 </td> <td> 0000723 // telomere maintenance // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from mutant phenotype /// 0006303 // double-strand break repair via nonhomologous end joining // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0060218 // hematopoietic stem cell differentiation // inferred from electronic annotation /// 0071398 // cellular response to fatty acid // inferred from electronic annotation /// 0071475 // cellular hyperosmotic salinity response // inferred from electronic annotation /// 0071481 // cellular response to X-ray // inferred from electronic annotation /// 0075713 // establishment of integrated proviral latency // traceable author statement </td> <td> 0000783 // nuclear telomere cap complex // traceable author statement /// 0000784 // nuclear chromosome, telomeric region // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0043564 // Ku70:Ku80 complex // inferred from direct assay /// 0070419 // nonhomologous end joining complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003691 // double-stranded telomeric DNA binding // inferred from direct assay /// 0004003 // ATP-dependent DNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042162 // telomeric DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051575 // 5'-deoxyribose-5-phosphate lyase activity // inferred from mutant phenotype </td> <td> 171.45 </td> <td> 821.50 </td> <td> 3.47 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212399_s_at </td> <td> 212399_s_at </td> <td> D50911 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D50911.2 /DEF=Homo sapiens mRNA for KIAA0121 protein, partial cds. /FEA=mRNA /GEN=KIAA0121 /PROD=KIAA0121 protein /DB_XREF=gi:6633996 /UG=Hs.155584 KIAA0121 gene product </td> <td> D50911 </td> <td> vestigial-like family member 4 </td> <td> VGLL4 </td> <td> 9686 </td> <td> NM_001128219 /// NM_001128220 /// NM_001128221 /// NM_001284390 /// NM_001284391 /// NM_014667 /// XM_006713423 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td>  </td> <td> -43.25 </td> <td> 125.88 </td> <td> -3.46 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 217732_s_at </td> <td> 217732_s_at </td> <td> AF092128 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF092128.1 /DEF=Homo sapiens putative transmembrane protein E3-16 mRNA, complete cds.  /FEA=mRNA /PROD=putative transmembrane protein E3-16 /DB_XREF=gi:5138905 /UG=Hs.239625 integral membrane protein 2B /FL=gb:NM_021999.1 gb:AF136973.1 gb:BC000554.1 gb:AF092128.1 gb:AF152462.1 gb:AF246221.1 </td> <td> AF092128 </td> <td> integral membrane protein 2B </td> <td> ITM2B </td> <td> 9445 </td> <td> NM_021999 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042985 // negative regulation of amyloid precursor protein biosynthetic process // inferred from direct assay /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from direct assay /// 0031301 // integral component of organelle membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001540 // beta-amyloid binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> 154.45 </td> <td> 890.25 </td> <td> 3.46 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200023_s_at </td> <td> 200023_s_at </td> <td> NM_003754 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003754.1 /DEF=Homo sapiens eukaryotic translation initiation factor 3, subunit 5 (epsilon, 47kD) (EIF3S5), mRNA.  /FEA=mRNA /GEN=EIF3S5 /PROD=eukaryotic translation initiation factor 3,subunit 5 (epsilon, 47kD) /DB_XREF=gi:4503518 /UG=Hs.7811 eukaryotic translation initiation factor 3, subunit 5 (epsilon, 47kD) /FL=gb:BC000490.1 gb:U94855.1 gb:NM_003754.1 </td> <td> NM_003754 </td> <td> eukaryotic translation initiation factor 3, subunit F </td> <td> EIF3F </td> <td> 8665 </td> <td> NM_003754 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016579 // protein deubiquitination // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation </td> <td> 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // traceable author statement /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -175.30 </td> <td> 1424.80 </td> <td> -3.46 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 211202_s_at </td> <td> 211202_s_at </td> <td> AF087481 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF087481.1 /DEF=Homo sapiens retinoblastoma binding protein 2 homolog 1 (RBBP2H1) mRNA, complete cds.  /FEA=mRNA /GEN=RBBP2H1 /PROD=retinoblastoma binding protein 2 homolog 1 /DB_XREF=gi:4322487 /UG=Hs.143323 putative DNAchromatin binding motif /FL=gb:AF087481.1 </td> <td> AF087481 </td> <td> lysine (K)-specific demethylase 5B </td> <td> KDM5B </td> <td> 10765 </td> <td> NM_006618 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from direct assay /// 0034721 // histone H3-K4 demethylation, trimethyl-H3-K4-specific // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0032453 // histone demethylase activity (H3-K4 specific) // inferred from electronic annotation /// 0034647 // histone demethylase activity (H3-trimethyl-K4 specific) // inferred from direct assay /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -95.75 </td> <td> 249.90 </td> <td> -3.46 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 204045_at </td> <td> 204045_at </td> <td> NM_004780 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004780.1 /DEF=Homo sapiens transcription elongation factor A (SII)-like 1 (TCEAL1), mRNA.  /FEA=mRNA /GEN=TCEAL1 /PROD=transcription elongation factor A (SII)-like 1 /DB_XREF=gi:4759215 /UG=Hs.95243 transcription elongation factor A (SII)-like 1 /FL=gb:BC000809.1 gb:NM_004780.1 gb:M99701.1 </td> <td> NM_004780 </td> <td> transcription elongation factor A (SII)-like 1 </td> <td> TCEAL1 </td> <td> 9338 </td> <td> NM_001006639 /// NM_001006640 /// NM_004780 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement </td> <td> 40.27 </td> <td> 87.51 </td> <td> 3.46 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 219020_at </td> <td> 219020_at </td> <td> NM_022460 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022460.1 /DEF=Homo sapiens hypothetical protein FLJ14249 similar to HS1 binding protein 3 (FLJ14249), mRNA.  /FEA=mRNA /GEN=FLJ14249 /PROD=hypothetical protein FLJ14249 similar to HS1binding  protein 3 /DB_XREF=gi:11968000 /UG=Hs.125520 hypothetical protein FLJ14249 similar to HS1 binding  protein 3 /FL=gb:NM_022460.1 </td> <td> NM_022460 </td> <td> HCLS1 binding protein 3 </td> <td> HS1BP3 </td> <td> 64342 </td> <td> NM_022460 </td> <td> 0007154 // cell communication // inferred from electronic annotation </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation </td> <td> -64.25 </td> <td> 132.70 </td> <td> -3.46 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 207559_s_at </td> <td> 207559_s_at </td> <td> NM_005096 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005096.1 /DEF=Homo sapiens zinc finger protein 261 (ZNF261), mRNA. /FEA=mRNA /GEN=ZNF261 /PROD=zinc finger protein 261 /DB_XREF=gi:4827066 /UG=Hs.9568 zinc finger protein 261 /FL=gb:AB002383.1 gb:NM_005096.1 </td> <td> NM_005096 </td> <td> zinc finger, MYM-type 3 </td> <td> ZMYM3 </td> <td> 9203 </td> <td> NM_001171162 /// NM_001171163 /// NM_005096 /// NM_201599 /// XM_005262309 /// XM_005262310 /// XM_006724715 </td> <td> 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007275 // multicellular organismal development // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 46.72 </td> <td> 122.14 </td> <td> 3.46 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218053_at </td> <td> 218053_at </td> <td> NM_017892 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017892.1 /DEF=Homo sapiens hypothetical protein FLJ20585 (FLJ20585), mRNA. /FEA=mRNA /GEN=FLJ20585 /PROD=hypothetical protein FLJ20585 /DB_XREF=gi:8923548 /UG=Hs.107213 hypothetical protein FLJ20585 /FL=gb:AF151059.1 gb:NM_017892.1 </td> <td> NM_017892 </td> <td> PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) </td> <td> PRPF40A </td> <td> 55660 </td> <td> NM_017892 /// XM_005246676 /// XM_005246677 /// XM_005246678 /// XM_005246679 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from electronic annotation </td> <td> 61.45 </td> <td> 284.75 </td> <td> 3.46 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 214288_s_at </td> <td> 214288_s_at </td> <td> W86293 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W86293 /FEA=EST /DB_XREF=gi:1398731 /DB_XREF=est:zh54c06.s1 /CLONE=IMAGE:415882 /UG=Hs.75748 proteasome (prosome, macropain) subunit, beta type, 1 </td> <td> W86293 </td> <td> proteasome (prosome, macropain) subunit, beta type, 1 </td> <td> PSMB1 </td> <td> 5689 </td> <td> NM_002793 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -99.58 </td> <td> 1085.91 </td> <td> -3.46 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 219522_at </td> <td> 219522_at </td> <td> NM_014344 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014344.1 /DEF=Homo sapiens putative secreted ligand homologous to fjx1 (FJX1), mRNA.  /FEA=mRNA /GEN=FJX1 /PROD=putative secreted ligand homologous to fjx1 /DB_XREF=gi:7657095 /UG=Hs.39384 putative secreted ligand homologous to fjx1 /FL=gb:NM_014344.1 </td> <td> NM_014344 </td> <td> four jointed box 1 (Drosophila) </td> <td> FJX1 </td> <td> 24147 </td> <td> NM_014344 </td> <td>  </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation </td> <td>  </td> <td> 45.08 </td> <td> 74.26 </td> <td> 3.46 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218881_s_at </td> <td> 218881_s_at </td> <td> NM_024530 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024530.1 /DEF=Homo sapiens hypothetical protein FLJ23306 (FLJ23306), mRNA. /FEA=mRNA /GEN=FLJ23306 /PROD=hypothetical protein FLJ23306 /DB_XREF=gi:13375679 /UG=Hs.325364 hypothetical protein FLJ23306 /FL=gb:NM_024530.1 </td> <td> NM_024530 </td> <td> FOS-like antigen 2 </td> <td> FOSL2 </td> <td> 2355 </td> <td> NM_005253 /// XM_005264231 /// XM_006711976 /// XM_006711977 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0008219 // cell death // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -45.35 </td> <td> 57.48 </td> <td> -3.45 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 213941_x_at </td> <td> 213941_x_at </td> <td> AI970731 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI970731 /FEA=EST /DB_XREF=gi:5767485 /DB_XREF=est:wr14b05.x1 /CLONE=IMAGE:2481489 /UG=Hs.301547 ribosomal protein S7 </td> <td> AI970731 </td> <td> ribosomal protein S7 </td> <td> RPS7 </td> <td> 6201 </td> <td> NM_001011 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0002181 // cytoplasmic translation // not recorded /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030686 // 90S preribosome // not recorded /// 0032040 // small-subunit processome // not recorded /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -368.75 </td> <td> 2372.15 </td> <td> -3.45 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 219918_s_at </td> <td> 219918_s_at </td> <td> NM_018123 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018123.1 /DEF=Homo sapiens hypothetical protein FLJ10517 (FLJ10517), mRNA. /FEA=mRNA /GEN=FLJ10517 /PROD=hypothetical protein FLJ10517 /DB_XREF=gi:8922484 /UG=Hs.279797 hypothetical protein FLJ10517 /FL=gb:NM_018123.1 </td> <td> NM_018123 </td> <td> asp (abnormal spindle) homolog, microcephaly associated (Drosophila) </td> <td> ASPM </td> <td> 259266 </td> <td> NM_001206846 /// NM_018136 </td> <td> 0001764 // neuron migration // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0021873 // forebrain neuroblast division // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045769 // negative regulation of asymmetric cell division // inferred from electronic annotation /// 0048477 // oogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051661 // maintenance of centrosome location // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from electronic annotation </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation </td> <td> 71.00 </td> <td> 201.25 </td> <td> 3.45 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212356_at </td> <td> 212356_at </td> <td> AB002321 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB002321.1 /DEF=Human mRNA for KIAA0323 gene, partial cds. /FEA=mRNA /GEN=KIAA0323 /DB_XREF=gi:2224586 /UG=Hs.7911 KIAA0323 protein </td> <td> AB002321 </td> <td> KH and NYN domain containing </td> <td> KHNYN </td> <td> 23351 </td> <td> NM_001290256 /// NM_001290257 /// NM_015299 /// XM_005267473 /// XM_005267474 /// XM_005267476 </td> <td>  </td> <td>  </td> <td> 0003723 // RNA binding // inferred from electronic annotation </td> <td> 37.00 </td> <td> 74.15 </td> <td> 3.45 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202026_at </td> <td> 202026_at </td> <td> NM_003002 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003002.1 /DEF=Homo sapiens succinate dehydrogenase complex, subunit D, integral membrane protein (SDHD), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=SDHD /PROD=succinate dehydrogenase complex, subunit Dprecursor /DB_XREF=gi:4506864 /UG=Hs.168289 succinate dehydrogenase complex, subunit D, integral membrane protein /FL=gb:BC005263.1 gb:AB006202.1 gb:NM_003002.1 </td> <td> NM_003002 </td> <td> succinate dehydrogenase complex, subunit D, integral membrane protein </td> <td> SDHD </td> <td> 6392 </td> <td> NM_001276503 /// NM_001276504 /// NM_001276506 /// NM_003002 /// NR_077060 </td> <td> 0006099 // tricarboxylic acid cycle // inferred from direct assay /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // traceable author statement /// 0005740 // mitochondrial envelope // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005749 // mitochondrial respiratory chain complex II // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000104 // succinate dehydrogenase activity // inferred from direct assay /// 0009055 // electron carrier activity // traceable author statement /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048039 // ubiquinone binding // inferred from sequence or structural similarity </td> <td> 76.62 </td> <td> 172.09 </td> <td> 3.45 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 204533_at </td> <td> 204533_at </td> <td> NM_001565 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001565.1 /DEF=Homo sapiens small inducible cytokine subfamily B (Cys-X-Cys), member 10 (SCYB10), mRNA.  /FEA=mRNA /GEN=SCYB10 /PROD=interferon gamma-induced  precursor /DB_XREF=gi:4504700 /UG=Hs.2248 small inducible cytokine subfamily B (Cys-X-Cys), member 10 /FL=gb:NM_001565.1 </td> <td> NM_001565 </td> <td> chemokine (C-X-C motif) ligand 10 </td> <td> CXCL10 </td> <td> 3627 </td> <td> NM_001565 </td> <td> 0002690 // positive regulation of leukocyte chemotaxis // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007267 // cell-cell signaling // traceable author statement /// 0007517 // muscle organ development // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009306 // protein secretion // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010818 // T cell chemotaxis // inferred from mutant phenotype /// 0010996 // response to auditory stimulus // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030816 // positive regulation of cAMP metabolic process // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0034605 // cellular response to heat // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from direct assay /// 0043950 // positive regulation of cAMP-mediated signaling // inferred from direct assay /// 0045859 // regulation of protein kinase activity // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 2000406 // positive regulation of T cell migration // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation </td> <td> 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inferred from direct assay /// 0008201 // heparin binding // inferred from mutant phenotype /// 0008603 // cAMP-dependent protein kinase regulator activity // traceable author statement /// 0048248 // CXCR3 chemokine receptor binding // inferred from direct assay </td> <td> -35.95 </td> <td> 53.02 </td> <td> -3.45 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202250_s_at </td> <td> 202250_s_at </td> <td> NM_015726 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015726.1 /DEF=Homo sapiens H326 (H326), mRNA. /FEA=mRNA /GEN=H326 /PROD=H326 /DB_XREF=gi:7657147 /UG=Hs.110707 H326 /FL=gb:U06631.1 gb:NM_015726.1 </td> <td> NM_015726 </td> <td> DDB1 and CUL4 associated factor 8 </td> <td> DCAF8 </td> <td> 50717 </td> <td> NM_015726 /// NR_028103 /// NR_028104 /// NR_028105 /// NR_028106 </td> <td> 0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0005777 // peroxisome // inferred from electronic annotation /// 0080008 // Cul4-RING E3 ubiquitin ligase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 42.05 </td> <td> 77.58 </td> <td> 3.45 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202550_s_at </td> <td> 202550_s_at </td> <td> NM_004738 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004738.1 /DEF=Homo sapiens VAMP (vesicle-associated membrane protein)-associated protein B and C (VAPB), mRNA.  /FEA=mRNA /GEN=VAPB /PROD=VAMP (vesicle-associated membraneprotein)-associated protein B and C /DB_XREF=gi:4759301 /UG=Hs.182625 VAMP (vesicle-associated membrane protein)-associated protein B and C /FL=gb:BC001712.1 gb:AF086628.1 gb:NM_004738.1 gb:AF160212.1 </td> <td> NM_004738 </td> <td> VAMP (vesicle-associated membrane protein)-associated protein B and C </td> <td> VAPB </td> <td> 9217 </td> <td> NM_001195677 /// NM_004738 /// NR_036633 /// XM_006723888 </td> <td> 0006665 // sphingolipid metabolic process // traceable author statement /// 0006874 // cellular calcium ion homeostasis // inferred from mutant phenotype /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from direct assay /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from direct assay </td> <td> -48.28 </td> <td> 216.96 </td> <td> -3.45 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202602_s_at </td> <td> 202602_s_at </td> <td> NM_014500 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014500.1 /DEF=Homo sapiens HIV TAT specific factor 1 (HTATSF1), mRNA. /FEA=mRNA /GEN=HTATSF1 /PROD=HIV TAT specific factor 1 /DB_XREF=gi:7657636 /UG=Hs.171595 HIV TAT specific factor 1 /FL=gb:U76992.1 gb:NM_014500.1 </td> <td> NM_014500 </td> <td> HIV-1 Tat specific factor 1 </td> <td> HTATSF1 </td> <td> 27336 </td> <td> NM_001163280 /// NM_014500 /// XM_005262404 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0032784 // regulation of DNA-templated transcription, elongation // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 38.08 </td> <td> 147.01 </td> <td> 3.45 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 204864_s_at </td> <td> 204864_s_at </td> <td> NM_002184 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002184.1 /DEF=Homo sapiens interleukin 6 signal transducer (gp130, oncostatin M receptor) (IL6ST), mRNA.  /FEA=mRNA /GEN=IL6ST /PROD=interleukin 6 signal transducer (gp130,oncostatin M receptor) /DB_XREF=gi:4504674 /UG=Hs.82065 interleukin 6 signal transducer (gp130, oncostatin M receptor) /FL=gb:M57230.1 gb:NM_002184.1 </td> <td> NM_002184 </td> <td> interleukin 6 signal transducer </td> <td> IL6ST </td> <td> 3572 </td> <td> NM_001190981 /// NM_002184 /// NM_175767 /// NR_120480 /// XM_005248496 </td> <td> 0002675 // positive regulation of acute inflammatory response // inferred by curator /// 0002821 // positive regulation of adaptive immune response // inferred by curator /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008593 // regulation of Notch signaling pathway // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0034097 // response to cytokine // inferred from direct assay /// 0038154 // interleukin-11-mediated signaling pathway // inferred from electronic annotation /// 0038165 // oncostatin-M-mediated signaling pathway // inferred from mutant phenotype /// 0042102 // positive regulation of T cell proliferation // inferred from mutant phenotype /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048861 // leukemia inhibitory factor signaling pathway // inferred from genetic interaction /// 0070102 // interleukin-6-mediated signaling pathway // inferred from mutant phenotype /// 0070104 // negative regulation of interleukin-6-mediated signaling pathway // inferred from direct assay /// 0070106 // interleukin-27-mediated signaling pathway // inferred from mutant phenotype /// 0070120 // ciliary neurotrophic factor-mediated signaling pathway // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005896 // interleukin-6 receptor complex // inferred from direct assay /// 0005900 // oncostatin-M receptor complex // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070110 // ciliary neurotrophic factor receptor complex // inferred from direct assay </td> <td> 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004897 // ciliary neurotrophic factor receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from genetic interaction /// 0004921 // interleukin-11 receptor activity // inferred from electronic annotation /// 0004923 // leukemia inhibitory factor receptor activity // inferred from genetic interaction /// 0004924 // oncostatin-M receptor activity // inferred from direct assay /// 0005127 // ciliary neurotrophic factor receptor binding // inferred from physical interaction /// 0005138 // interleukin-6 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from physical interaction /// 0019970 // interleukin-11 binding // inferred from electronic annotation /// 0019981 // interleukin-6 binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // traceable author statement /// 0045509 // interleukin-27 receptor activity // inferred by curator </td> <td> -169.15 </td> <td> 193.17 </td> <td> -3.45 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201256_at </td> <td> 201256_at </td> <td> NM_004718 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004718.1 /DEF=Homo sapiens cytochrome c oxidase subunit VIIa polypeptide 2 like (COX7A2L), mRNA.  /FEA=mRNA /GEN=COX7A2L /PROD=cytochrome c oxidase subunit VIIa polypeptide 2like /DB_XREF=gi:4758041 /UG=Hs.30888 cytochrome c oxidase subunit VIIa polypeptide 2 like /FL=gb:BC005251.1 gb:AB007618.1 gb:NM_004718.1 </td> <td> NM_004718 </td> <td> cytochrome c oxidase subunit VIIa polypeptide 2 like </td> <td> COX7A2L </td> <td> 9167 </td> <td> NM_004718 </td> <td> 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005746 // mitochondrial respiratory chain // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation </td> <td> -60.10 </td> <td> 569.10 </td> <td> -3.45 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202926_at </td> <td> 202926_at </td> <td> NM_015909 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015909.1 /DEF=Homo sapiens neuroblastoma-amplified protein (LOC51594), mRNA. /FEA=mRNA /GEN=LOC51594 /PROD=neuroblastoma-amplified protein /DB_XREF=gi:7706239 /UG=Hs.15430 neuroblastoma-amplified protein /FL=gb:AF056195.1 gb:NM_015909.1 </td> <td> NM_015909 </td> <td> neuroblastoma amplified sequence </td> <td> NBAS </td> <td> 51594 </td> <td> NM_015909 /// NR_052013 </td> <td> 0000956 // nuclear-transcribed mRNA catabolic process // inferred from mutant phenotype /// 2000623 // negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td>  </td> <td> -51.27 </td> <td> 124.81 </td> <td> -3.44 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 213577_at </td> <td> 213577_at </td> <td> AA639705 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA639705 /FEA=EST /DB_XREF=gi:2563484 /DB_XREF=est:np60h03.s1 /CLONE=IMAGE:1130741 /UG=Hs.71465 squalene epoxidase </td> <td> AA639705 </td> <td> squalene epoxidase </td> <td> SQLE </td> <td> 6713 </td> <td> NM_003129 </td> <td> 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // non-traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // non-traceable author statement </td> <td> 0004497 // monooxygenase activity // inferred from electronic annotation /// 0004506 // squalene monooxygenase activity // non-traceable author statement /// 0004506 // squalene monooxygenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation </td> <td> 92.10 </td> <td> 132.98 </td> <td> 3.44 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 204809_at </td> <td> 204809_at </td> <td> NM_006660 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006660.3 /DEF=Homo sapiens ClpX (caseinolytic protease X, E. coli) homolog (CLPX), mRNA.  /FEA=mRNA /GEN=CLPX /PROD=ClpX (caseinolytic protease X, E. coli) homolog /DB_XREF=gi:12597621 /UG=Hs.113823 ClpX (caseinolytic protease X, E. coli) homolog /FL=gb:NM_006660.3 </td> <td> NM_006660 </td> <td> caseinolytic mitochondrial matrix peptidase chaperone subunit </td> <td> CLPX </td> <td> 10845 </td> <td> NM_006660 /// XR_429441 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from direct assay /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0009368 // endopeptidase Clp complex // inferred from direct assay /// 0009841 // mitochondrial endopeptidase Clp complex // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004176 // ATP-dependent peptidase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -39.65 </td> <td> 79.55 </td> <td> -3.44 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208230_s_at </td> <td> 208230_s_at </td> <td> NM_013960 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013960.1 /DEF=Homo sapiens neuregulin 1 (NRG1), transcript variant ndf43, mRNA. /FEA=mRNA /GEN=NRG1 /PROD=neuregulin 1 isoform ndf43 /DB_XREF=gi:7669519 /UG=Hs.172816 neuregulin 1 /FL=gb:U02326.1 gb:NM_013960.1 </td> <td> NM_013960 </td> <td> neuregulin 1 </td> <td> NRG1 </td> <td> 3084 </td> <td> NM_001159995 /// NM_001159996 /// NM_001159999 /// NM_001160001 /// NM_001160002 /// NM_001160004 /// NM_001160005 /// NM_001160007 /// NM_001160008 /// NM_004495 /// NM_013956 /// NM_013957 /// NM_013958 /// NM_013959 /// NM_013960 /// NM_013962 /// NM_013964 /// XM_005273485 /// XM_005273486 /// XM_005273487 /// XM_006716335 </td> <td> 0000165 // MAPK cascade // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0003161 // cardiac conduction system development // inferred from electronic annotation /// 0003222 // ventricular trabecula myocardium morphogenesis // inferred from direct assay /// 0007154 // cell communication // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from direct assay /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010667 // negative regulation of cardiac muscle cell apoptotic process // inferred from direct assay /// 0014032 // neural crest cell development // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0021781 // glial cell fate commitment // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030879 // mammary gland development // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038127 // ERBB signaling pathway // inferred from direct assay /// 0042060 // wound healing // inferred from direct assay /// 0042060 // wound healing // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation /// 0043496 // regulation of protein homodimerization activity // traceable author statement /// 0043497 // regulation of protein heterodimerization activity // inferred from direct assay /// 0043624 // cellular protein complex disassembly // inferred from genetic interaction /// 0045087 // innate immune response // traceable author statement /// 0045213 // neurotransmitter receptor metabolic process // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0051048 // negative regulation of secretion // inferred from direct assay /// 0051155 // positive regulation of striated muscle cell differentiation // inferred from sequence or structural similarity /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from sequence or structural similarity /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from direct assay /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0060379 // cardiac muscle cell myoblast differentiation // inferred from direct assay /// 0060956 // endocardial cell differentiation // inferred from direct assay /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from direct assay </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0003712 // transcription cofactor activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005125 // cytokine activity // traceable author statement /// 0005176 // ErbB-2 class receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // non-traceable author statement /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // inferred by curator /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // non-traceable author statement /// 0030971 // receptor tyrosine kinase binding // non-traceable author statement /// 0043125 // ErbB-3 class receptor binding // inferred from direct assay /// 0043125 // ErbB-3 class receptor binding // inferred from physical interaction </td> <td> -37.38 </td> <td> 70.79 </td> <td> -3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208750_s_at </td> <td> 208750_s_at </td> <td> AA580004 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA580004 /FEA=EST /DB_XREF=gi:2355331 /DB_XREF=est:nl79c05.s1 /CLONE=IMAGE:1056872 /UG=Hs.74571 ADP-ribosylation factor 1 /FL=gb:M84326.1 gb:M36340.1 gb:AF055002.1 gb:AF052179.1 gb:NM_001658.2 </td> <td> AA580004 </td> <td> ADP-ribosylation factor 1 /// microRNA 3620 </td> <td> ARF1 /// MIR3620 </td> <td> 375 /// 100500810 </td> <td> NM_001024226 /// NM_001024227 /// NM_001024228 /// NM_001658 /// NR_037415 </td> <td> 0002090 // regulation of receptor internalization // inferred from sequence or structural similarity /// 0006184 // GTP catabolic process // traceable author statement /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from mutant phenotype /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0034315 // regulation of Arp2/3 complex-mediated actin nucleation // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0060292 // long term synaptic depression // inferred from sequence or structural similarity /// 0061024 // membrane organization // traceable author statement /// 0097061 // dendritic spine organization // inferred from sequence or structural similarity </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030017 // sarcomere // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -108.85 </td> <td> 458.88 </td> <td> -3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201742_x_at </td> <td> 201742_x_at </td> <td> NM_006924 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006924.1 /DEF=Homo sapiens splicing factor, arginineserine-rich 1 (splicing factor 2, alternate splicing factor) (SFRS1), mRNA.  /FEA=mRNA /GEN=SFRS1 /PROD=splicing factor, arginineserine-rich 1(splicing factor 2, alternate splicing factor) /DB_XREF=gi:5902075 /UG=Hs.73737 splicing factor, arginineserine-rich 1 (splicing factor 2, alternate splicing factor) /FL=gb:M69040.1 gb:NM_006924.1 </td> <td> NM_006924 </td> <td> serine/arginine-rich splicing factor 1 </td> <td> SRSF1 </td> <td> 6426 </td> <td> NM_001078166 /// NM_006924 /// NR_034041 /// XM_006722012 /// XR_429911 /// XR_429912 /// XR_429999 /// XR_430000 /// XR_430001 /// XR_430002 /// XR_433418 /// XR_433419 /// XR_433420 /// XR_433421 /// XR_433422 </td> <td> 0000395 // mRNA 5'-splice site recognition // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0060048 // cardiac muscle contraction // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from physical interaction /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050733 // RS domain binding // inferred from electronic annotation </td> <td> 146.88 </td> <td> 733.19 </td> <td> 3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201435_s_at </td> <td> 201435_s_at </td> <td> AW268640 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW268640 /FEA=EST /DB_XREF=gi:6655670 /DB_XREF=est:xv52a03.x1 /CLONE=IMAGE:2816716 /UG=Hs.79306 eukaryotic translation initiation factor 4E /FL=gb:M15353.1 gb:NM_001968.1 </td> <td> AW268640 </td> <td> eukaryotic translation initiation factor 4E </td> <td> EIF4E </td> <td> 1977 </td> <td> NM_001130678 /// NM_001130679 /// NM_001968 /// XM_006714126 /// XM_006714127 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0016281 // eukaryotic translation initiation factor 4F complex // inferred from direct assay /// 0016442 // RISC complex // inferred from direct assay /// 0033391 // chromatoid body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000339 // RNA cap binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0031370 // eukaryotic initiation factor 4G binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 64.65 </td> <td> 274.60 </td> <td> 3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208962_s_at </td> <td> 208962_s_at </td> <td> BE540552 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE540552 /FEA=EST /DB_XREF=gi:9769197 /DB_XREF=est:601066683F1 /CLONE=IMAGE:3452925 /UG=Hs.132898 fatty acid desaturase 1 /FL=gb:AF084558.1 gb:NM_013402.2 gb:AL512760.1 gb:AF199596.1 gb:AF226273.1 </td> <td> BE540552 </td> <td> fatty acid desaturase 1 /// microRNA 1908 </td> <td> FADS1 /// MIR1908 </td> <td> 3992 /// 100302263 </td> <td> NM_013402 /// NR_031729 </td> <td> 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006636 // unsaturated fatty acid biosynthetic process // inferred from direct assay /// 0006636 // unsaturated fatty acid biosynthetic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007267 // cell-cell signaling // non-traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // traceable author statement /// 0009267 // cellular response to starvation // inferred from direct assay /// 0009744 // response to sucrose // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019369 // arachidonic acid metabolic process // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0033189 // response to vitamin A // inferred from electronic annotation /// 0033559 // unsaturated fatty acid metabolic process // traceable author statement /// 0036109 // alpha-linolenic acid metabolic process // traceable author statement /// 0043651 // linoleic acid metabolic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045595 // regulation of cell differentiation // non-traceable author statement /// 0046456 // icosanoid biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // non-traceable author statement /// 0043231 // intracellular membrane-bounded organelle // non-traceable author statement </td> <td> 0000248 // C-5 sterol desaturase activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016717 // oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation </td> <td> 31.68 </td> <td> 96.01 </td> <td> 3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201791_s_at </td> <td> 201791_s_at </td> <td> NM_001360 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001360.1 /DEF=Homo sapiens 7-dehydrocholesterol reductase (DHCR7), mRNA. /FEA=mRNA /GEN=DHCR7 /PROD=7-dehydrocholesterol reductase /DB_XREF=gi:4503320 /UG=Hs.11806 7-dehydrocholesterol reductase /FL=gb:BC000054.1 gb:AF034544.1 gb:AF067127.1 gb:AF096305.1 gb:NM_001360.1 </td> <td> NM_001360 </td> <td> 7-dehydrocholesterol reductase </td> <td> DHCR7 </td> <td> 1717 </td> <td> NM_001163817 /// NM_001360 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from mutant phenotype /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045540 // regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005640 // nuclear outer membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0047598 // 7-dehydrocholesterol reductase activity // inferred from direct assay </td> <td> 36.73 </td> <td> 78.51 </td> <td> 3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218212_s_at </td> <td> 218212_s_at </td> <td> NM_004531 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004531.1 /DEF=Homo sapiens molybdenum cofactor synthesis 2 (MOCS2), mRNA. /FEA=mRNA /GEN=MOCS2 /PROD=molybdenum cofactor synthesis 2 /DB_XREF=gi:4758731 /UG=Hs.70565 molybdenum cofactor synthesis 2 /FL=gb:NM_004531.1 gb:AF155659.1 </td> <td> NM_004531 </td> <td> molybdenum cofactor synthesis 2 </td> <td> MOCS2 </td> <td> 4338 </td> <td> NM_004531 /// NM_176806 </td> <td> 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from direct assay /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from mutant phenotype /// 0032324 // molybdopterin cofactor biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0019008 // molybdopterin synthase complex // inferred from physical interaction /// 0019008 // molybdopterin synthase complex // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030366 // molybdopterin synthase activity // inferred from direct assay /// 0030366 // molybdopterin synthase activity // traceable author statement /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> 43.80 </td> <td> 84.62 </td> <td> 3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 207467_x_at </td> <td> 207467_x_at </td> <td> NM_001750 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001750.2 /DEF=Homo sapiens calpastatin (CAST), mRNA. /FEA=mRNA /GEN=CAST /PROD=calpastatin /DB_XREF=gi:5729759 /UG=Hs.279607 calpastatin /FL=gb:U58996.2 gb:NM_001750.2 </td> <td> NM_001750 </td> <td> calpastatin </td> <td> CAST </td> <td> 831 </td> <td> NM_001042440 /// NM_001042441 /// NM_001042442 /// NM_001042443 /// NM_001042444 /// NM_001042445 /// NM_001042446 /// NM_001190442 /// NM_001284212 /// NM_001284213 /// NM_001750 /// NM_173060 /// NM_173061 /// NM_173062 /// NM_173063 /// NR_033798 /// NR_104285 /// XM_006714696 /// XM_006714697 /// XM_006714698 /// XM_006714699 /// XM_006714700 /// XM_006714701 /// XM_006714702 /// XM_006714703 /// XM_006714704 /// XM_006714705 /// XM_006714706 /// XM_006714707 /// XM_006714708 /// XM_006714709 /// XM_006714710 /// XM_006714711 /// XM_006714712 /// XM_006714713 /// XM_006714714 /// XM_006714715 </td> <td> 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement /// 2000675 // negative regulation of type B pancreatic cell apoptotic process // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0010859 // calcium-dependent cysteine-type endopeptidase inhibitor activity // non-traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -67.62 </td> <td> 305.41 </td> <td> -3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212141_at </td> <td> 212141_at </td> <td> AA604621 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA604621 /FEA=EST /DB_XREF=gi:2445485 /DB_XREF=est:no84b08.s1 /CLONE=IMAGE:1113495 /UG=Hs.154443 minichromosome maintenance deficient (S. cerevisiae) 4 </td> <td> AA604621 </td> <td> minichromosome maintenance complex component 4 </td> <td> MCM4 </td> <td> 4173 </td> <td> NM_005914 /// NM_182746 /// XM_005251234 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006268 // DNA unwinding involved in DNA replication // inferred from electronic annotation /// 0006270 // DNA replication initiation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0015979 // photosynthesis // inferred from electronic annotation /// 0015995 // chlorophyll biosynthetic process // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0042555 // MCM complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016851 // magnesium chelatase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> 55.85 </td> <td> 47.02 </td> <td> 3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202589_at </td> <td> 202589_at </td> <td> NM_001071 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001071.1 /DEF=Homo sapiens thymidylate synthetase (TYMS), mRNA. /FEA=mRNA /GEN=TYMS /PROD=thymidylate synthetase /DB_XREF=gi:4507750 /UG=Hs.82962 thymidylate synthetase /FL=gb:BC002567.1 gb:NM_001071.1 </td> <td> NM_001071 </td> <td> thymidylate synthetase </td> <td> TYMS </td> <td> 7298 </td> <td> NM_001071 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0005976 // polysaccharide metabolic process // inferred from electronic annotation /// 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006206 // pyrimidine nucleobase metabolic process // traceable author statement /// 0006231 // dTMP biosynthetic process // inferred from electronic annotation /// 0006235 // dTTP biosynthetic process // inferred from electronic annotation /// 0006260 // DNA replication // non-traceable author statement /// 0006281 // DNA repair // non-traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0009157 // deoxyribonucleoside monophosphate biosynthetic process // traceable author statement /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019088 // immortalization of host cell by virus // inferred from electronic annotation /// 0019860 // uracil metabolic process // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0033189 // response to vitamin A // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046078 // dUMP metabolic process // inferred from electronic annotation /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0046653 // tetrahydrofolate metabolic process // inferred from electronic annotation /// 0046683 // response to organophosphorus // inferred from expression pattern /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0048589 // developmental growth // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0060574 // intestinal epithelial cell maturation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0004799 // thymidylate synthase activity // traceable author statement /// 0005542 // folic acid binding // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation </td> <td> 286.25 </td> <td> 722.50 </td> <td> 3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 210312_s_at </td> <td> 210312_s_at </td> <td> BC002640 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002640.1 /DEF=Homo sapiens, Similar to uterine protein, clone MGC:4279, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to uterine protein /DB_XREF=gi:12803610 /UG=Hs.4187 hypothetical protein 24636 /FL=gb:BC002640.1 </td> <td> BC002640 </td> <td> intraflagellar transport 20 homolog (Chlamydomonas) </td> <td> IFT20 </td> <td> 90410 </td> <td> NM_001267774 /// NM_001267775 /// NM_001267776 /// NM_001267777 /// NM_001267778 /// NM_174887 </td> <td> 0030030 // cell projection organization // inferred from electronic annotation /// 0034067 // protein localization to Golgi apparatus // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0051642 // centrosome localization // inferred from electronic annotation /// 1902017 // regulation of cilium assembly // inferred from sequence or structural similarity /// 2000785 // regulation of autophagic vacuole assembly // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030992 // intraciliary transport particle B // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0044292 // dendrite terminus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 38.25 </td> <td> 112.40 </td> <td> 3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202908_at </td> <td> 202908_at </td> <td> NM_006005 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006005.2 /DEF=Homo sapiens Wolfram syndrome 1 (wolframin) (WFS1), mRNA. /FEA=mRNA /GEN=WFS1 /PROD=Wolfram syndrome protein /DB_XREF=gi:13376995 /UG=Hs.26077 Wolfram syndrome 1 (wolframin) /FL=gb:NM_006005.2 gb:AF084481.1 </td> <td> NM_006005 </td> <td> Wolfram syndrome 1 (wolframin) </td> <td> WFS1 </td> <td> 7466 </td> <td> NM_001145853 /// NM_006005 </td> <td> 0001822 // kidney development // inferred from mutant phenotype /// 0003091 // renal water homeostasis // inferred from mutant phenotype /// 0006983 // ER overload response // inferred by curator /// 0006983 // ER overload response // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007601 // visual perception // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0022417 // protein maturation by protein folding // inferred by curator /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from sequence or structural similarity /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0032469 // endoplasmic reticulum calcium ion homeostasis // inferred from direct assay /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0042048 // olfactory behavior // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043069 // negative regulation of programmed cell death // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045862 // positive regulation of proteolysis // inferred from sequence or structural similarity /// 0045927 // positive regulation of growth // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050877 // neurological system process // inferred from mutant phenotype /// 0051247 // positive regulation of protein metabolic process // inferred from direct assay /// 0051928 // positive regulation of calcium ion transport // inferred from direct assay /// 0055074 // calcium ion homeostasis // inferred from direct assay /// 0070845 // polyubiquitinated misfolded protein transport // inferred from sequence or structural similarity /// 1902236 // negative regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 2000675 // negative regulation of type B pancreatic cell apoptotic process // inferred from mutant phenotype </td> <td> 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay /// 0030425 // dendrite // inferred from sequence or structural similarity </td> <td> 0005215 // transporter activity // inferred from sequence or structural similarity /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from sequence or structural similarity /// 0033613 // activating transcription factor binding // inferred from sequence or structural similarity /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction </td> <td> 53.65 </td> <td> 185.22 </td> <td> 3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 203405_at </td> <td> 203405_at </td> <td> NM_003720 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003720.1 /DEF=Homo sapiens Down syndrome critical region gene 2 (DSCR2), mRNA. /FEA=mRNA /GEN=DSCR2 /PROD=Down syndrome critical region protein 2 /DB_XREF=gi:4505022 /UG=Hs.5198 Down syndrome critical region gene 2 /FL=gb:BC003619.1 gb:NM_003720.1 </td> <td> NM_003720 </td> <td> proteasome (prosome, macropain) assembly chaperone 1 </td> <td> PSMG1 </td> <td> 8624 </td> <td> NM_001261824 /// NM_003720 /// NM_203433 /// NR_049728 </td> <td> 0043248 // proteasome assembly // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 57.83 </td> <td> 209.69 </td> <td> 3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218243_at </td> <td> 218243_at </td> <td> NM_025158 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025158.1 /DEF=Homo sapiens hypothetical protein FLJ22251 (FLJ22251), mRNA. /FEA=mRNA /GEN=FLJ22251 /PROD=hypothetical protein FLJ22251 /DB_XREF=gi:13376756 /UG=Hs.289064 hypothetical protein FLJ22251 /FL=gb:NM_025158.1 </td> <td> NM_025158 </td> <td> RUN and FYVE domain containing 1 </td> <td> RUFY1 </td> <td> 80230 </td> <td> NM_001040451 /// NM_001040452 /// NM_025158 /// XM_005265993 /// XM_006714921 /// XM_006714922 /// XR_245276 /// XR_245277 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 41.90 </td> <td> 181.47 </td> <td> 3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 211762_s_at </td> <td> 211762_s_at </td> <td> BC005978 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005978.1 /DEF=Homo sapiens, karyopherin alpha 2 (RAG cohort 1, importin alpha 1), clone MGC:14668, mRNA, complete cds.  /FEA=mRNA /PROD=karyopherin alpha 2 (RAG cohort 1, importinalpha 1) /DB_XREF=gi:13543656 /FL=gb:BC005978.1 </td> <td> BC005978 </td> <td> karyopherin alpha 2 (RAG cohort 1, importin alpha 1) </td> <td> KPNA2 </td> <td> 3838 </td> <td> NM_002266 </td> <td> 0000018 // regulation of DNA recombination // traceable author statement /// 0000085 // mitotic G2 phase // traceable author statement /// 0006259 // DNA metabolic process // traceable author statement /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing protein import into nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // inferred from direct assay /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 204.48 </td> <td> 810.66 </td> <td> 3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 211733_x_at </td> <td> 211733_x_at </td> <td> BC005911 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005911.1 /DEF=Homo sapiens, sterol carrier protein 2, clone MGC:14505, mRNA, complete cds.  /FEA=mRNA /PROD=sterol carrier protein 2 /DB_XREF=gi:13543502 /FL=gb:BC005911.1 </td> <td> BC005911 </td> <td> sterol carrier protein 2 </td> <td> SCP2 </td> <td> 6342 </td> <td> NM_001007098 /// NM_001007099 /// NM_001007100 /// NM_001007250 /// NM_001193599 /// NM_001193600 /// NM_001193617 /// NM_002979 /// XM_005271103 /// XM_005271104 </td> <td> 0006694 // steroid biosynthetic process // inferred from direct assay /// 0006699 // bile acid biosynthetic process // traceable author statement /// 0006701 // progesterone biosynthetic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // traceable author statement /// 0015914 // phospholipid transport // inferred from direct assay /// 0032385 // positive regulation of intracellular cholesterol transport // inferred from direct assay /// 0032385 // positive regulation of intracellular cholesterol transport // non-traceable author statement /// 0032959 // inositol trisphosphate biosynthetic process // inferred from direct assay /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0033559 // unsaturated fatty acid metabolic process // traceable author statement /// 0036109 // alpha-linolenic acid metabolic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045940 // positive regulation of steroid metabolic process // inferred from direct assay /// 0072659 // protein localization to plasma membrane // inferred from direct assay /// 1901373 // lipid hydroperoxide transport // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005782 // peroxisomal matrix // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000062 // fatty-acyl-CoA binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0008526 // phosphatidylinositol transporter activity // inferred from direct assay /// 0015485 // cholesterol binding // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0032934 // sterol binding // inferred from electronic annotation /// 0033814 // propanoyl-CoA C-acyltransferase activity // inferred from electronic annotation /// 0036042 // long-chain fatty acyl-CoA binding // inferred from direct assay /// 0070538 // oleic acid binding // inferred from direct assay </td> <td> 74.03 </td> <td> 230.39 </td> <td> 3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201858_s_at </td> <td> 201858_s_at </td> <td> J03223 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:J03223.1 /DEF=Human secretory granule proteoglycan peptide core mRNA, complete cds.  /FEA=mRNA /GEN=PRG1 /DB_XREF=gi:190419 /UG=Hs.1908 proteoglycan 1, secretory granule /FL=gb:J03223.1 gb:NM_002727.1 </td> <td> J03223 </td> <td> serglycin </td> <td> SRGN </td> <td> 5552 </td> <td> NM_002727 /// NR_036430 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008626 // granzyme-mediated apoptotic signaling pathway // inferred from direct assay /// 0016485 // protein processing // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0030502 // negative regulation of bone mineralization // inferred from direct assay /// 0031214 // biomineral tissue development // inferred from electronic annotation /// 0033364 // mast cell secretory granule organization // inferred from sequence or structural similarity /// 0033371 // T cell secretory granule organization // inferred from sequence or structural similarity /// 0033373 // maintenance of protease location in mast cell secretory granule // inferred from sequence or structural similarity /// 0033382 // maintenance of granzyme B location in T cell secretory granule // inferred from sequence or structural similarity /// 0050710 // negative regulation of cytokine secretion // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0042588 // zymogen granule // inferred from electronic annotation /// 0042629 // mast cell granule // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation </td> <td> -258.72 </td> <td> 1181.99 </td> <td> -3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 220755_s_at </td> <td> 220755_s_at </td> <td> NM_016947 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016947.1 /DEF=Homo sapiens G8 protein (G8), mRNA. /FEA=mRNA /GEN=G8 /PROD=G8 protein /DB_XREF=gi:8393383 /UG=Hs.109798 G8 protein /FL=gb:NM_016947.1 </td> <td> NM_016947 </td> <td> chromosome 6 open reading frame 48 </td> <td> C6orf48 </td> <td> 50854 </td> <td> NM_001040437 /// NM_001040438 /// NM_001287482 /// NM_001287483 /// NM_001287484 /// NM_001287485 /// NM_001287486 /// NM_001287487 /// NM_001287488 /// NM_016947 </td> <td>  </td> <td>  </td> <td>  </td> <td> -134.85 </td> <td> 472.52 </td> <td> -3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218336_at </td> <td> 218336_at </td> <td> NM_012394 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012394.2 /DEF=Homo sapiens prefoldin 2 (PFDN2), mRNA. /FEA=mRNA /GEN=PFDN2 /PROD=prefoldin 2 /DB_XREF=gi:12408674 /UG=Hs.298229 prefoldin 2 /FL=gb:NM_012394.2 gb:AF165883.1 gb:AF117237.1 gb:AF151065.1 </td> <td> NM_012394 </td> <td> prefoldin subunit 2 </td> <td> PFDN2 </td> <td> 5202 </td> <td> NM_012394 </td> <td> 0006457 // protein folding // non-traceable author statement /// 0006457 // protein folding // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016272 // prefoldin complex // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // non-traceable author statement </td> <td> -46.25 </td> <td> 361.40 </td> <td> -3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218274_s_at </td> <td> 218274_s_at </td> <td> NM_018089 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018089.1 /DEF=Homo sapiens hypothetical protein FLJ10415 (FLJ10415), mRNA. /FEA=mRNA /GEN=FLJ10415 /PROD=hypothetical protein FLJ10415 /DB_XREF=gi:8922412 /UG=Hs.23788 hypothetical protein FLJ10415 /FL=gb:BC000238.1 gb:NM_018089.1 </td> <td> NM_018089 </td> <td> ankyrin repeat and zinc finger domain containing 1 </td> <td> ANKZF1 </td> <td> 55139 </td> <td> NM_001042410 /// NM_001282792 /// NM_018089 /// XM_005246663 /// XR_427096 /// XR_427097 </td> <td>  </td> <td> 0016020 // membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -31.32 </td> <td> 26.06 </td> <td> -3.43 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 210756_s_at </td> <td> 210756_s_at </td> <td> AF308601 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF308601.1 /DEF=Homo sapiens NOTCH 2 (N2) mRNA, complete cds. /FEA=mRNA /GEN=N2 /PROD=NOTCH 2 /DB_XREF=gi:11275977 /UG=Hs.8121 Notch (Drosophila) homolog 2 /FL=gb:AF308601.1 </td> <td> AF308601 </td> <td> notch 2 </td> <td> NOTCH2 </td> <td> 4853 </td> <td> NM_001200001 /// NM_024408 /// XM_005270901 /// XM_005270902 /// XM_006710667 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001709 // cell fate determination // traceable author statement /// 0001890 // placenta development // inferred from electronic annotation /// 0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0002437 // inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0003184 // pulmonary valve morphogenesis // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009887 // organ morphogenesis // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016049 // cell growth // inferred from direct assay /// 0019827 // stem cell maintenance // traceable author statement /// 0030097 // hemopoiesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030522 // intracellular receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0046579 // positive regulation of Ras protein signal transduction // inferred from direct assay /// 0046849 // bone remodeling // inferred from mutant phenotype /// 0050793 // regulation of developmental process // inferred from electronic annotation /// 0060413 // atrial septum morphogenesis // inferred from mutant phenotype /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0061314 // Notch signaling involved in heart development // inferred by curator /// 0072602 // interleukin-4 secretion // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0004872 // receptor activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0038049 // ligand-activated RNA polymerase II transcription factor binding transcription factor activity // traceable author statement </td> <td> -40.50 </td> <td> 101.70 </td> <td> -3.42 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 217840_at </td> <td> 217840_at </td> <td> NM_016222 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016222.1 /DEF=Homo sapiens DEAD-box protein abstrakt (ABS), mRNA. /FEA=mRNA /GEN=ABS /PROD=DEAD-box protein abstrakt /DB_XREF=gi:7705259 /UG=Hs.274317 DEAD-box protein abstrakt /FL=gb:AF195417.1 gb:NM_016222.1 </td> <td> NM_016222 </td> <td> DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 </td> <td> DDX41 </td> <td> 51428 </td> <td> NM_016222 /// XM_006714870 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0032479 // regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0035458 // cellular response to interferon-beta // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -60.22 </td> <td> 207.96 </td> <td> -3.42 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200860_s_at </td> <td> 200860_s_at </td> <td> BC000779 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000779.1 /DEF=Homo sapiens, Similar to KIAA1007 protein, clone MGC:692, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to KIAA1007 protein /DB_XREF=gi:12653966 /UG=Hs.279949 KIAA1007 protein /FL=gb:BC000779.1 gb:AF110778.1 gb:NM_016284.1 </td> <td> BC000779 </td> <td> CCR4-NOT transcription complex, subunit 1 </td> <td> CNOT1 </td> <td> 23019 </td> <td> NM_001265612 /// NM_016284 /// NM_206999 /// NR_049763 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010606 // positive regulation of cytoplasmic mRNA processing body assembly // inferred from direct assay /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from direct assay /// 0060213 // positive regulation of nuclear-transcribed mRNA poly(A) tail shortening // inferred from mutant phenotype /// 0090503 // RNA phosphodiester bond hydrolysis, exonucleolytic // inferred from direct assay /// 1900153 // positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // inferred from mutant phenotype /// 2000036 // regulation of stem cell maintenance // inferred from mutant phenotype </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030014 // CCR4-NOT complex // inferred from direct assay </td> <td> 0004535 // poly(A)-specific ribonuclease activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0042974 // retinoic acid receptor binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -84.03 </td> <td> 382.14 </td> <td> -3.42 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218244_at </td> <td> 218244_at </td> <td> NM_017948 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017948.1 /DEF=Homo sapiens hypothetical protein FLJ20736 (FLJ20736), mRNA. /FEA=mRNA /GEN=FLJ20736 /PROD=hypothetical protein FLJ20736 /DB_XREF=gi:8923662 /UG=Hs.48712 hypothetical protein FLJ20736 /FL=gb:NM_017948.1 </td> <td> NM_017948 </td> <td> nucleolar protein 8 </td> <td> NOL8 </td> <td> 55035 </td> <td> NM_001256394 /// NM_017948 /// NR_046106 /// XM_006717166 /// XM_006717167 /// XM_006717168 /// XM_006717169 /// XM_006717170 /// XM_006717171 /// XM_006717172 /// XM_006717173 </td> <td> 0006260 // DNA replication // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 47.62 </td> <td> 83.56 </td> <td> 3.42 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 220122_at </td> <td> 220122_at </td> <td> NM_024717 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024717.1 /DEF=Homo sapiens hypothetical protein FLJ22344 (FLJ22344), mRNA. /FEA=mRNA /GEN=FLJ22344 /PROD=hypothetical protein FLJ22344 /DB_XREF=gi:13376020 /UG=Hs.107716 hypothetical protein FLJ22344 /FL=gb:NM_024717.1 </td> <td> NM_024717 </td> <td> multiple C2 domains, transmembrane 1 </td> <td> MCTP1 </td> <td> 79772 </td> <td> NM_001002796 /// NM_024717 /// XM_005272082 /// XM_005272083 /// XM_005272084 /// XM_005272085 /// XM_005272086 /// XM_005272087 /// XM_005272088 /// XM_005272089 /// XM_005272090 /// XM_005272091 /// XM_006714692 /// XM_006714693 /// XM_006714694 /// XR_427720 </td> <td> 0019722 // calcium-mediated signaling // non-traceable author statement </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay </td> <td> -212.60 </td> <td> 439.10 </td> <td> -3.42 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202235_at </td> <td> 202235_at </td> <td> BF511091 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF511091 /FEA=EST /DB_XREF=gi:11594389 /DB_XREF=est:UI-H-BI4-apn-c-05-0-UI.s1 /CLONE=IMAGE:3087753 /UG=Hs.75231 solute carrier family 16 (monocarboxylic acid transporters), member 1 /FL=gb:NM_003051.1 gb:L31801.1 </td> <td> BF511091 </td> <td> solute carrier family 16 (monocarboxylate transporter), member 1 </td> <td> SLC16A1 </td> <td> 6566 </td> <td> NM_001166496 /// NM_003051 </td> <td> 0006090 // pyruvate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0015728 // mevalonate transport // traceable author statement /// 0035873 // lactate transmembrane transport // inferred from electronic annotation /// 0035879 // plasma membrane lactate transport // inferred from sequence or structural similarity /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015130 // mevalonate transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0097159 // organic cyclic compound binding // inferred from electronic annotation </td> <td> 28.95 </td> <td> 39.15 </td> <td> 3.42 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208812_x_at </td> <td> 208812_x_at </td> <td> BC004489 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004489.1 /DEF=Homo sapiens, major histocompatibility complex, class I, C, clone MGC:11039, mRNA, complete cds.  /FEA=mRNA /PROD=major histocompatibility complex, class I, C /DB_XREF=gi:13325360 /UG=Hs.277477 major histocompatibility complex, class I, C /FL=gb:NM_002117.1 gb:M99388.1 gb:U06487.1 gb:BC002463.1 gb:BC004489.1 gb:D64145.1 gb:D38526.1 gb:D49552.1 gb:D49819.1 gb:M24097.1 gb:M84171.1 gb:M84172.1 gb:M84173.1 gb:M84174.1 gb:M26429.1 gb:M26430.1 gb:M26431.1 gb:U41420.1 gb:U41386.1 gb:D50852.1 gb:D50853.1 gb:D50854.1 gb:D83031.1 gb:U57028.1 gb:U06695.1 gb:U06696.1 gb:M99389.1 gb:M99390.1 gb:M28160.1 gb:U09853.1 gb:AF168611.1 gb:L38251.1 gb:D31817.1 </td> <td> BC004489 </td> <td> major histocompatibility complex, class I, C </td> <td> HLA-C </td> <td> 3107 </td> <td> NM_001243042 /// NM_002117 </td> <td> 0001539 // cilium or flagellum-dependent cell motility // non-traceable author statement /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002486 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent // inferred from direct assay /// 0006955 // immune response // non-traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005102 // receptor binding // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0032395 // MHC class II receptor activity // non-traceable author statement /// 0042605 // peptide antigen binding // not recorded /// 0042605 // peptide antigen binding // inferred from direct assay /// 0042605 // peptide antigen binding // inferred from sequence or structural similarity /// 0046977 // TAP binding // inferred from direct assay </td> <td> -260.25 </td> <td> 782.70 </td> <td> -3.42 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 213532_at </td> <td> 213532_at </td> <td> AI797833 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI797833 /FEA=EST /DB_XREF=gi:5363390 /DB_XREF=est:wh79e10.x1 /CLONE=IMAGE:2386986 /UG=Hs.52438 ESTs, Weakly similar to ORF YOR126c S.cerevisiae </td> <td> AI797833 </td> <td> ADAM metallopeptidase domain 17 </td> <td> ADAM17 </td> <td> 6868 </td> <td> NM_003183 </td> <td> 0001666 // response to hypoxia // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0002446 // neutrophil mediated immunity // inferred by curator /// 0002467 // germinal center formation // inferred from sequence or structural similarity /// 0002690 // positive regulation of leukocyte chemotaxis // inferred by curator /// 0006508 // proteolysis // inferred from direct assay /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006509 // membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0006915 // apoptotic process // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0010820 // positive regulation of T cell chemotaxis // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030183 // B cell differentiation // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0030574 // collagen catabolic process // traceable author statement /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0031659 // positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032717 // negative regulation of interleukin-8 production // inferred from mutant phenotype /// 0032722 // positive regulation of chemokine production // inferred from mutant phenotype /// 0033025 // regulation of mast cell apoptotic process // inferred from sequence or structural similarity /// 0033077 // T cell differentiation in thymus // inferred from sequence or structural similarity /// 0033627 // cell adhesion mediated by integrin // inferred from direct assay /// 0035313 // wound healing, spreading of epidermal cells // inferred from expression pattern /// 0035625 // epidermal growth factor-activated receptor transactivation by G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0042493 // response to drug // inferred from sequence or structural similarity /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from direct assay /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from mutant phenotype /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048536 // spleen development // inferred from sequence or structural similarity /// 0048870 // cell motility // inferred from sequence or structural similarity /// 0051088 // PMA-inducible membrane protein ectodomain proteolysis // inferred from direct assay /// 0051088 // PMA-inducible membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0051272 // positive regulation of cellular component movement // inferred from sequence or structural similarity /// 0055099 // response to high density lipoprotein particle // inferred from direct assay /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005911 // cell-cell junction // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay </td> <td> 0004222 // metalloendopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from mutant phenotype /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0005112 // Notch binding // inferred from direct assay /// 0005138 // interleukin-6 receptor binding // inferred from physical interaction /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from direct assay /// 0008237 // metallopeptidase activity // inferred from mutant phenotype /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -50.40 </td> <td> 189.38 </td> <td> -3.42 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 221818_at </td> <td> 221818_at </td> <td> BF446693 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF446693 /FEA=EST /DB_XREF=gi:11511831 /DB_XREF=est:7q90g09.x1 /CLONE=IMAGE:3705785 /UG=Hs.6259 KIAA1698 protein </td> <td> BF446693 </td> <td> integrator complex subunit 5 </td> <td> INTS5 </td> <td> 80789 </td> <td> NM_030628 </td> <td> 0016180 // snRNA processing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032039 // integrator complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 31.92 </td> <td> 52.16 </td> <td> 3.42 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218142_s_at </td> <td> 218142_s_at </td> <td> NM_016302 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016302.1 /DEF=Homo sapiens protein x 0001 (LOC51185), mRNA. /FEA=mRNA /GEN=LOC51185 /PROD=protein x 0001 /DB_XREF=gi:10047097 /UG=Hs.18925 protein x 0001 /FL=gb:NM_016302.1 gb:AF117230.1 </td> <td> NM_016302 </td> <td> cereblon </td> <td> CRBN </td> <td> 51185 </td> <td> NM_001173482 /// NM_016302 /// XM_005265202 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0032463 // negative regulation of protein homooligomerization // inferred from electronic annotation /// 0034766 // negative regulation of ion transmembrane transport // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0090073 // positive regulation of protein homodimerization activity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031464 // Cul4A-RING E3 ubiquitin ligase complex // inferred from direct assay </td> <td> 0004176 // ATP-dependent peptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -42.12 </td> <td> 85.01 </td> <td> -3.42 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212918_at </td> <td> 212918_at </td> <td> AI962943 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI962943 /FEA=EST /DB_XREF=gi:5755656 /DB_XREF=est:wt25b06.x1 /CLONE=IMAGE:2508467 /UG=Hs.192570 hypothetical protein FLJ22028 </td> <td> AI962943 </td> <td> RecQ helicase-like </td> <td> RECQL </td> <td> 5965 </td> <td> NM_002907 /// NM_032941 /// XM_005253461 /// XM_005253462 /// XM_005253463 /// XM_005253464 /// XM_006719133 </td> <td> 0000733 // DNA strand renaturation // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from direct assay /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036310 // annealing helicase activity // inferred from direct assay /// 0043140 // ATP-dependent 3'-5' DNA helicase activity // inferred from electronic annotation </td> <td> 50.30 </td> <td> 166.45 </td> <td> 3.42 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202052_s_at </td> <td> 202052_s_at </td> <td> NM_015577 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015577.1 /DEF=Homo sapiens novel retinal pigment epithelial gene (NORPEG), mRNA. /FEA=mRNA /GEN=NORPEG /PROD=DKFZP564G013 protein /DB_XREF=gi:13470085 /UG=Hs.15165 novel retinal pigment epithelial gene /FL=gb:NM_015577.1 gb:AF155135.1 </td> <td> NM_015577 </td> <td> retinoic acid induced 14 </td> <td> RAI14 </td> <td> 26064 </td> <td> NM_001145520 /// NM_001145521 /// NM_001145522 /// NM_001145523 /// NM_001145525 /// NM_015577 /// XM_006714469 </td> <td> 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -171.80 </td> <td> 980.77 </td> <td> -3.41 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 214271_x_at </td> <td> 214271_x_at </td> <td> AA281332 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA281332 /FEA=EST /DB_XREF=gi:1924013 /DB_XREF=est:zs93h10.s1 /CLONE=IMAGE:705091 /UG=Hs.182979 ribosomal protein L12 </td> <td> AA281332 </td> <td> ribosomal protein L12 </td> <td> RPL12 </td> <td> 6136 </td> <td> NM_000976 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -431.80 </td> <td> 2113.70 </td> <td> -3.41 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212428_at </td> <td> 212428_at </td> <td> AW001101 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW001101 /FEA=EST /DB_XREF=gi:5848017 /DB_XREF=est:wu24c05.x1 /CLONE=IMAGE:2520968 /UG=Hs.3852 KIAA0368 protein </td> <td> AW001101 </td> <td> KIAA0368 </td> <td> KIAA0368 </td> <td> 23392 </td> <td> NM_001080398 /// XM_005251850 /// XM_005251851 /// XM_005251852 /// XM_005251853 /// XM_005251854 </td> <td> 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype </td> <td> 0000502 // proteasome complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005771 // multivesicular body // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030134 // ER to Golgi transport vesicle // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation </td> <td> -39.03 </td> <td> 163.99 </td> <td> -3.41 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209279_s_at </td> <td> 209279_s_at </td> <td> BC000245 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000245.1 /DEF=Homo sapiens, NAD(P) dependent steroid dehydrogenase-like; H105e3, clone MGC:848, mRNA, complete cds.  /FEA=mRNA /PROD=NAD(P) dependent steroid dehydrogenase-like;H105e3 /DB_XREF=gi:12652968 /UG=Hs.57698 NAD(P) dependent steroid dehydrogenase-like; H105e3 /FL=gb:BC000245.1 gb:U47105.2 gb:NM_015922.1 </td> <td> BC000245 </td> <td> NAD(P) dependent steroid dehydrogenase-like </td> <td> NSDHL </td> <td> 50814 </td> <td> NM_001129765 /// NM_015922 /// XM_006724824 </td> <td> 0001942 // hair follicle development // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045226 // extracellular polysaccharide biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005811 // lipid particle // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0003854 // 3-beta-hydroxy-delta5-steroid dehydrogenase activity // inferred from electronic annotation /// 0008831 // dTDP-4-dehydrorhamnose reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0047012 // sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from electronic annotation </td> <td> 31.17 </td> <td> 60.79 </td> <td> 3.41 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 204589_at </td> <td> 204589_at </td> <td> NM_014840 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014840.1 /DEF=Homo sapiens KIAA0537 gene product (KIAA0537), mRNA. /FEA=mRNA /GEN=KIAA0537 /PROD=KIAA0537 gene product /DB_XREF=gi:7662169 /UG=Hs.200598 KIAA0537 gene product /FL=gb:AB011109.1 gb:NM_014840.1 </td> <td> NM_014840 </td> <td> NUAK family, SNF1-like kinase, 1 </td> <td> NUAK1 </td> <td> 9891 </td> <td> NM_014840 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0035507 // regulation of myosin-light-chain-phosphatase activity // inferred from direct assay /// 0042127 // regulation of cell proliferation // traceable author statement /// 2000772 // regulation of cellular senescence // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0002039 // p53 binding // inferred from physical interaction /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 89.27 </td> <td> 244.89 </td> <td> 3.41 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202941_at </td> <td> 202941_at </td> <td> NM_021074 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021074.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) flavoprotein 2 (24kD) (NDUFV2), mRNA.  /FEA=mRNA /GEN=NDUFV2 /PROD=NADH dehydrogenase (ubiquinone) flavoprotein 2(24kD) /DB_XREF=gi:10835024 /UG=Hs.51299 NADH dehydrogenase (ubiquinone) flavoprotein 2 (24kD) /FL=gb:NM_021074.1 gb:BC001632.1 gb:M22538.1 </td> <td> NM_021074 </td> <td> NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa </td> <td> NDUFV2 </td> <td> 4729 </td> <td> NM_021074 /// XR_243808 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // inferred from mutant phenotype /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0007399 // nervous system development // inferred from mutant phenotype /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048738 // cardiac muscle tissue development // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // inferred from mutant phenotype /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0045272 // plasma membrane respiratory chain complex I // not recorded /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0003954 // NADH dehydrogenase activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from mutant phenotype /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0009055 // electron carrier activity // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation </td> <td> -52.85 </td> <td> 365.65 </td> <td> -3.41 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 211665_s_at </td> <td> 211665_s_at </td> <td> L20686 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L20686.1 /DEF=Homo sapiens guanine nucleotide releasing factor (SOS2) mRNA, complete cds.  /FEA=mRNA /GEN=SOS2 /PROD=guanine nucleotide releasing factor /DB_XREF=gi:1220367 /FL=gb:L20686.1 </td> <td> L20686 </td> <td> son of sevenless homolog 2 (Drosophila) </td> <td> SOS2 </td> <td> 6655 </td> <td> NM_006939 /// XM_005268021 </td> <td> 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051057 // positive regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -33.03 </td> <td> 70.51 </td> <td> -3.41 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200881_s_at </td> <td> 200881_s_at </td> <td> NM_001539 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001539.1 /DEF=Homo sapiens heat shock protein, DNAJ-like 2 (HSJ2), mRNA. /FEA=mRNA /GEN=HSJ2 /PROD=heat shock protein, DNAJ-like 2 /DB_XREF=gi:4504510 /UG=Hs.94 DnaJ (Hsp40) homolog, subfamily A, member 1 /FL=gb:D13388.1 gb:L08069.1 gb:NM_001539.1 </td> <td> NM_001539 </td> <td> DnaJ (Hsp40) homolog, subfamily A, member 1 </td> <td> DNAJA1 </td> <td> 3301 </td> <td> NM_001539 </td> <td> 0006457 // protein folding // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043508 // negative regulation of JUN kinase activity // inferred from mutant phenotype /// 0051223 // regulation of protein transport // inferred from direct assay /// 0070585 // protein localization to mitochondrion // inferred from mutant phenotype </td> <td> 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from direct assay /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> -101.72 </td> <td> 920.04 </td> <td> -3.41 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218883_s_at </td> <td> 218883_s_at </td> <td> NM_024629 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024629.1 /DEF=Homo sapiens hypothetical protein FLJ23468 (FLJ23468), mRNA. /FEA=mRNA /GEN=FLJ23468 /PROD=hypothetical protein FLJ23468 /DB_XREF=gi:13375855 /UG=Hs.38178 hypothetical protein FLJ23468 /FL=gb:NM_024629.1 </td> <td> NM_024629 </td> <td> centromere protein U </td> <td> CENPU </td> <td> 79682 </td> <td> NM_024629 /// NR_104593 /// XM_005263218 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0034080 // centromere-specific nucleosome assembly // traceable author statement </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -69.70 </td> <td> 209.80 </td> <td> -3.41 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 219798_s_at </td> <td> 219798_s_at </td> <td> NM_019606 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019606.1 /DEF=Homo sapiens hypothetical protein FLJ20257 (FLJ20257), mRNA. /FEA=mRNA /GEN=FLJ20257 /PROD=hypothetical protein FLJ20257 /DB_XREF=gi:9624989 /UG=Hs.178011 hypothetical protein FLJ20257 /FL=gb:NM_019606.1 </td> <td> NM_019606 </td> <td> methylphosphate capping enzyme </td> <td> MEPCE </td> <td> 56257 </td> <td> NM_001194990 /// NM_001194991 /// NM_001194992 /// NM_019606 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001510 // RNA methylation // inferred from direct assay /// 0016073 // snRNA metabolic process // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation /// 0035562 // negative regulation of chromatin binding // inferred from electronic annotation /// 0040031 // snRNA modification // inferred from direct assay /// 1900087 // positive regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation </td> <td>  </td> <td> 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008173 // RNA methyltransferase activity // inferred from direct assay /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 58.62 </td> <td> 124.44 </td> <td> 3.40 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 203870_at </td> <td> 203870_at </td> <td> BE856374 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE856374 /FEA=EST /DB_XREF=gi:10369335 /DB_XREF=est:7f93f06.x1 /CLONE=IMAGE:3304547 /UG=Hs.109268 hypothetical protein FLJ12552 /FL=gb:NM_022832.1 </td> <td> BE856374 </td> <td> ubiquitin specific peptidase 46 </td> <td> USP46 </td> <td> 64854 </td> <td> NM_001134223 /// NM_001286767 /// NM_001286768 /// NM_022832 </td> <td> 0001662 // behavioral fear response // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007610 // behavior // inferred from electronic annotation /// 0007610 // behavior // inferred from sequence or structural similarity /// 0016579 // protein deubiquitination // inferred from direct assay /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from sequence or structural similarity </td> <td>  </td> <td> 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation </td> <td> 40.03 </td> <td> 61.71 </td> <td> 3.40 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218341_at </td> <td> 218341_at </td> <td> NM_024664 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024664.1 /DEF=Homo sapiens hypothetical protein FLJ11838 (FLJ11838), mRNA. /FEA=mRNA /GEN=FLJ11838 /PROD=hypothetical protein FLJ11838 /DB_XREF=gi:13375918 /UG=Hs.72531 hypothetical protein FLJ11838 /FL=gb:NM_024664.1 </td> <td> NM_024664 </td> <td> phosphopantothenoylcysteine synthetase </td> <td> PPCS </td> <td> 79717 </td> <td> NM_001077447 /// NM_001287506 /// NM_001287507 /// NM_001287508 /// NM_001287509 /// NM_001287510 /// NM_001287511 /// NM_024664 </td> <td> 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0009108 // coenzyme biosynthetic process // traceable author statement /// 0015937 // coenzyme A biosynthetic process // inferred from direct assay /// 0015937 // coenzyme A biosynthetic process // inferred from electronic annotation /// 0015939 // pantothenate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004632 // phosphopantothenate--cysteine ligase activity // inferred from direct assay /// 0004632 // phosphopantothenate--cysteine ligase activity // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> 31.40 </td> <td> 43.70 </td> <td> 3.40 </td> <td> 0.01 </td> <td> 0.02 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201041_s_at </td> <td> 201041_s_at </td> <td> NM_004417 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004417.2 /DEF=Homo sapiens dual specificity phosphatase 1 (DUSP1), mRNA. /FEA=mRNA /GEN=DUSP1 /PROD=dual specificity phosphatase 1 /DB_XREF=gi:7108342 /UG=Hs.171695 dual specificity phosphatase 1 /FL=gb:NM_004417.2 </td> <td> NM_004417 </td> <td> dual specificity phosphatase 1 </td> <td> DUSP1 </td> <td> 1843 </td> <td> NM_004417 </td> <td> 0000188 // inactivation of MAPK activity // inferred from sequence or structural similarity /// 0001706 // endoderm formation // not recorded /// 0006470 // protein dephosphorylation // not recorded /// 0006950 // response to stress // inferred from electronic annotation /// 0006979 // response to oxidative stress // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0033574 // response to testosterone // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from sequence or structural similarity /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035970 // peptidyl-threonine dephosphorylation // inferred from sequence or structural similarity /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // not recorded /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051447 // negative regulation of meiotic cell cycle // inferred from sequence or structural similarity /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0071850 // mitotic cell cycle arrest // inferred from sequence or structural similarity /// 0090266 // regulation of mitotic cell cycle spindle assembly checkpoint // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm //  /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0008330 // protein tyrosine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from sequence or structural similarity </td> <td> -200.15 </td> <td> 608.12 </td> <td> -3.40 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202821_s_at </td> <td> 202821_s_at </td> <td> AL044018 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL044018 /FEA=EST /DB_XREF=gi:5935931 /DB_XREF=est:DKFZp434J1028_s1 /CLONE=DKFZp434J1028 /UG=Hs.180398 LIM domain-containing preferred translocation partner in lipoma /FL=gb:NM_005578.1 </td> <td> AL044018 </td> <td> LIM domain containing preferred translocation partner in lipoma </td> <td> LPP </td> <td> 4026 </td> <td> NM_001167671 /// NM_001167672 /// NM_005578 /// XM_005247444 /// XM_005247445 /// XM_005247446 /// XM_005247447 /// XM_005247448 /// XM_005247450 /// XM_005247451 /// XM_005247453 /// XM_006713637 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -45.63 </td> <td> 76.96 </td> <td> -3.40 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201154_x_at </td> <td> 201154_x_at </td> <td> NM_000968 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000968.1 /DEF=Homo sapiens ribosomal protein L4 (RPL4), mRNA. /FEA=mRNA /GEN=RPL4 /PROD=ribosomal protein L4 /DB_XREF=gi:4506652 /UG=Hs.286 ribosomal protein L4 /FL=gb:BC001365.1 gb:L20868.1 gb:D23660.1 gb:NM_000968.1 </td> <td> NM_000968 </td> <td> ribosomal protein L4 /// small nucleolar RNA, C/D box 16 /// small nucleolar RNA, C/D box 18A /// small nucleolar RNA, C/D box 18B /// small nucleolar RNA, C/D box 18C </td> <td> RPL4 /// SNORD16 /// SNORD18A /// SNORD18B /// SNORD18C </td> <td> 6124 /// 595097 /// 595098 /// 595099 /// 595100 </td> <td> NM_000968 /// NR_002440 /// NR_002441 /// NR_002442 /// NR_002443 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -763.17 </td> <td> 2700.19 </td> <td> -3.39 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 203680_at </td> <td> 203680_at </td> <td> NM_002736 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002736.1 /DEF=Homo sapiens protein kinase, cAMP-dependent, regulatory, type II, beta (PRKAR2B), mRNA.  /FEA=mRNA /GEN=PRKAR2B /PROD=protein kinase, cAMP-dependent, regulatory, typeII, beta /DB_XREF=gi:4506064 /UG=Hs.77439 protein kinase, cAMP-dependent, regulatory, type II, beta /FL=gb:M31158.1 gb:NM_002736.1 </td> <td> NM_002736 </td> <td> protein kinase, cAMP-dependent, regulatory, type II, beta </td> <td> PRKAR2B </td> <td> 5577 </td> <td> NM_002736 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0097332 // response to antipsychotic drug // inferred from electronic annotation /// 0097338 // response to clozapine // inferred from electronic annotation /// 2000480 // negative regulation of cAMP-dependent protein kinase activity // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005952 // cAMP-dependent protein kinase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // inferred from direct assay /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0034236 // protein kinase A catalytic subunit binding // inferred from physical interaction </td> <td> 74.45 </td> <td> 216.30 </td> <td> 3.39 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 211787_s_at </td> <td> 211787_s_at </td> <td> BC006210 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006210.1 /DEF=Homo sapiens, Similar to eukaryotic translation initiation factor 4A, isoform 1, clone MGC:8484, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to eukaryotic translation initiationfactor 4A, isoform 1 /DB_XREF=gi:13623224 /FL=gb:BC006210.1 </td> <td> BC006210 </td> <td> eukaryotic translation initiation factor 4A1 /// uncharacterized LOC101928634 /// SENP3-EIF4A1 readthrough (NMD candidate) /// small nucleolar RNA, H/ACA box 48 /// small nucleolar RNA, H/ACA box 67 /// small nucleolar RNA, C/D box 10 </td> <td> EIF4A1 /// LOC101928634 /// SENP3-EIF4A1 /// SNORA48 /// SNORA67 /// SNORD10 </td> <td> 1973 /// 26781 /// 652965 /// 652966 /// 100533955 /// 101928634 </td> <td> NM_001204510 /// NM_001416 /// NR_002604 /// NR_002912 /// NR_002918 /// NR_037926 /// XR_244579 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031100 // organ regeneration // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000339 // RNA cap binding // traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003729 // mRNA binding // traceable author statement /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -443.90 </td> <td> 2231.03 </td> <td> -3.39 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 219161_s_at </td> <td> 219161_s_at </td> <td> NM_016951 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016951.2 /DEF=Homo sapiens transmembrane proteolipid (HSPC224), mRNA. /FEA=mRNA /GEN=HSPC224 /PROD=transmembrane proteolipid /DB_XREF=gi:10092593 /UG=Hs.15159 chemokine-like factor, alternatively spliced /FL=gb:NM_016951.2 gb:BC004380.1 gb:AF057306.1 gb:AF151058.1 gb:AF135380.2 </td> <td> NM_016951 </td> <td> chemokine-like factor /// CKLF-CMTM1 readthrough </td> <td> CKLF /// CKLF-CMTM1 </td> <td> 51192 /// 100529251 </td> <td> NM_001040138 /// NM_001040139 /// NM_001202509 /// NM_001204098 /// NM_001204099 /// NM_016326 /// NM_016951 /// NM_181640 /// NM_181641 </td> <td> 0006935 // chemotaxis // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from direct assay /// 0030595 // leukocyte chemotaxis // inferred from electronic annotation /// 0032940 // secretion by cell // inferred from direct assay /// 0048246 // macrophage chemotaxis // inferred from direct assay /// 0048247 // lymphocyte chemotaxis // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from direct assay </td> <td> 46.95 </td> <td> 101.67 </td> <td> 3.39 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 217742_s_at </td> <td> 217742_s_at </td> <td> NM_016628 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016628.1 /DEF=Homo sapiens hypothetical protein (LOC51322), mRNA. /FEA=mRNA /GEN=LOC51322 /PROD=hypothetical protein /DB_XREF=gi:7706169 /UG=Hs.70333 hypothetical protein /FL=gb:BC004258.1 gb:AF208858.1 gb:NM_016628.1 </td> <td> NM_016628 </td> <td> WW domain containing adaptor with coiled-coil </td> <td> WAC </td> <td> 51322 </td> <td> NM_016628 /// NM_100264 /// NM_100486 /// NR_024557 /// XM_005252454 /// XM_005252457 /// XM_005252459 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from mutant phenotype /// 0010390 // histone monoubiquitination // inferred from mutant phenotype /// 0016239 // positive regulation of macroautophagy // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0044783 // G1 DNA damage checkpoint // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0071894 // histone H2B conserved C-terminal lysine ubiquitination // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000993 // RNA polymerase II core binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> -162.55 </td> <td> 515.15 </td> <td> -3.39 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 213653_at </td> <td> 213653_at </td> <td> AW069290 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW069290 /FEA=EST /DB_XREF=gi:6024288 /DB_XREF=est:cr43g01.x1 /CLONE=HBMSC_cr43g01 /UG=Hs.268149 putative methyltransferase </td> <td> AW069290 </td> <td> methyltransferase like 3 </td> <td> METTL3 </td> <td> 56339 </td> <td> NM_019852 /// XM_006720206 </td> <td> 0001510 // RNA methylation // inferred from mutant phenotype /// 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from sequence or structural similarity /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0019827 // stem cell maintenance // inferred from sequence or structural similarity /// 0032259 // methylation // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0061157 // mRNA destabilization // inferred from sequence or structural similarity /// 0080009 // mRNA methylation // inferred from direct assay /// 0080009 // mRNA methylation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from direct assay /// 0036396 // MIS complex // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016422 // mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity // inferred from direct assay /// 0016422 // mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 37.13 </td> <td> 30.71 </td> <td> 3.39 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201656_at </td> <td> 201656_at </td> <td> NM_000210 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000210.1 /DEF=Homo sapiens integrin, alpha 6 (ITGA6), mRNA. /FEA=mRNA /GEN=ITGA6 /PROD=integrin alpha chain, alpha 6 /DB_XREF=gi:4557674 /UG=Hs.227730 integrin, alpha 6 /FL=gb:NM_000210.1 </td> <td> NM_000210 </td> <td> integrin, alpha 6 </td> <td> ITGA6 </td> <td> 3655 </td> <td> NM_000210 /// NM_001079818 /// XM_006712510 /// XM_006712511 </td> <td> 0007044 // cell-substrate junction assembly // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0031581 // hemidesmosome assembly // traceable author statement /// 0031589 // cell-substrate adhesion // inferred from mutant phenotype /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0033627 // cell adhesion mediated by integrin // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0042327 // positive regulation of phosphorylation // inferred from mutant phenotype /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from genetic interaction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005604 // basement membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0008305 // integrin complex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0034676 // integrin alpha6-beta4 complex // inferred from electronic annotation /// 0045178 // basal part of cell // inferred from electronic annotation </td> <td> 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 64.55 </td> <td> 266.52 </td> <td> 3.39 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208659_at </td> <td> 208659_at </td> <td> AF034607 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF034607.1 /DEF=Homo sapiens chloride channel ABP mRNA, complete cds. /FEA=mRNA /PROD=chloride channel ABP /DB_XREF=gi:4426566 /UG=Hs.74276 chloride intracellular channel 1 /FL=gb:U93205.1 gb:AF034607.1 gb:AF109197.1 gb:NM_001288.2 </td> <td> AF034607 </td> <td> chloride intracellular channel 1 </td> <td> CLIC1 </td> <td> 1192 </td> <td> NM_001287593 /// NM_001287594 /// NM_001288 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from electronic annotation /// 1902476 // chloride transmembrane transport // inferred from direct assay /// 1902476 // chloride transmembrane transport // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005903 // brush border // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 178.48 </td> <td> 944.84 </td> <td> 3.39 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201088_at </td> <td> 201088_at </td> <td> NM_002266 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002266.1 /DEF=Homo sapiens karyopherin alpha 2 (RAG cohort 1, importin alpha 1) (KPNA2), mRNA.  /FEA=mRNA /GEN=KPNA2 /PROD=karyopherin alpha 2 /DB_XREF=gi:4504896 /UG=Hs.159557 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) /FL=gb:NM_002266.1 gb:U09559.1 gb:U28386.1 </td> <td> NM_002266 </td> <td> karyopherin alpha 2 (RAG cohort 1, importin alpha 1) </td> <td> KPNA2 </td> <td> 3838 </td> <td> NM_002266 </td> <td> 0000018 // regulation of DNA recombination // traceable author statement /// 0000085 // mitotic G2 phase // traceable author statement /// 0006259 // DNA metabolic process // traceable author statement /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing protein import into nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // inferred from direct assay /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 194.85 </td> <td> 827.60 </td> <td> 3.39 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 204702_s_at </td> <td> 204702_s_at </td> <td> NM_004289 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004289.3 /DEF=Homo sapiens nuclear factor (erythroid-derived 2)-like 3 (NFE2L3), mRNA.  /FEA=mRNA /GEN=NFE2L3 /PROD=nuclear factor (erythroid-derived 2)-like 3 /DB_XREF=gi:5731346 /UG=Hs.22900 nuclear factor (erythroid-derived 2)-like 3 /FL=gb:AF133059.1 gb:AB010812.1 gb:NM_004289.3 gb:AF134891.1 </td> <td> NM_004289 </td> <td> nuclear factor, erythroid 2-like 3 </td> <td> NFE2L3 </td> <td> 9603 </td> <td> NM_004289 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -44.67 </td> <td> 103.21 </td> <td> -3.39 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 213812_s_at </td> <td> 213812_s_at </td> <td> AK024748 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024748.1 /DEF=Homo sapiens cDNA: FLJ21095 fis, clone CAS03846. /FEA=mRNA /DB_XREF=gi:10437113 /UG=Hs.108708 calciumcalmodulin-dependent protein kinase kinase 2, beta </td> <td> AK024748 </td> <td> calcium/calmodulin-dependent protein kinase kinase 2, beta </td> <td> CAMKK2 </td> <td> 10645 </td> <td> NM_001270485 /// NM_001270486 /// NM_006549 /// NM_153499 /// NM_153500 /// NM_172214 /// NM_172215 /// NM_172216 /// NM_172226 /// XM_005253822 /// XM_005253823 /// XM_005253824 </td> <td> 0000165 // MAPK cascade // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0045859 // regulation of protein kinase activity // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay </td> <td> 0005622 // intracellular // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004683 // calmodulin-dependent protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005516 // calmodulin binding // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -113.22 </td> <td> 308.34 </td> <td> -3.38 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212651_at </td> <td> 212651_at </td> <td> AB018283 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB018283.2 /DEF=Homo sapiens mRNA for KIAA0740 protein, partial cds. /FEA=mRNA /GEN=KIAA0740 /PROD=KIAA0740 protein /DB_XREF=gi:6705974 /UG=Hs.15099 KIAA0740 gene product </td> <td> AB018283 </td> <td> Rho-related BTB domain containing 1 </td> <td> RHOBTB1 </td> <td> 9886 </td> <td> NM_001242359 /// NM_014836 /// NR_024554 /// NR_024555 /// XM_006718084 /// XM_006718085 /// XM_006718086 /// XM_006718087 /// XM_006718088 /// XM_006718089 /// XR_428729 /// XR_428730 /// XR_428731 /// XR_428732 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 37.30 </td> <td> 53.30 </td> <td> 3.38 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 204837_at </td> <td> 204837_at </td> <td> AL080178 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL080178.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434K171 (from clone DKFZp434K171); partial cds.  /FEA=mRNA /GEN=DKFZp434K171 /PROD=hypothetical protein /DB_XREF=gi:5262652 /UG=Hs.27194 DKFZP434K171 protein /FL=gb:NM_015458.1 </td> <td> AL080178 </td> <td> myotubularin related protein 9 </td> <td> MTMR9 </td> <td> 66036 </td> <td> NM_015458 /// XM_005272396 </td> <td> 0016311 // dephosphorylation // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation </td> <td> 45.95 </td> <td> 220.55 </td> <td> 3.38 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 222163_s_at </td> <td> 222163_s_at </td> <td> BE890973 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE890973 /FEA=EST /DB_XREF=gi:10349835 /DB_XREF=est:601431962F1 /CLONE=IMAGE:3917319 /UG=Hs.5555 hypothetical protein MGC5347 </td> <td> BE890973 </td> <td> spermatogenesis associated 5-like 1 </td> <td> SPATA5L1 </td> <td> 79029 </td> <td> NM_024063 /// NR_027635 /// XM_005254657 /// XR_243126 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0070842 // aggresome assembly // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0009378 // four-way junction helicase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from electronic annotation </td> <td> 38.15 </td> <td> 61.70 </td> <td> 3.38 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212818_s_at </td> <td> 212818_s_at </td> <td> AF055024 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF055024.1 /DEF=Homo sapiens clone 24763 mRNA sequence. /FEA=mRNA /DB_XREF=gi:3005752 /UG=Hs.153489 ASB-1 protein /FL=gb:AF156777.1 gb:NM_016114.1 </td> <td> AF055024 </td> <td> ankyrin repeat and SOCS box containing 1 </td> <td> ASB1 </td> <td> 51665 </td> <td> NM_001040445 /// NM_016114 /// XM_005246080 /// XR_241235 /// XR_241236 /// XR_241237 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030539 // male genitalia development // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042036 // negative regulation of cytokine biosynthetic process // non-traceable author statement </td> <td> 0005622 // intracellular // inferred by curator </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 38.42 </td> <td> 75.11 </td> <td> 3.38 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 54970_at </td> <td> 54970_at </td> <td> AA868332 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AA868332:ak40h05.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-1408473 /clone_end=3' /gb=AA868332 /gi=2963777 /ug=Hs.77978 /len=481 </td> <td> AA868332 </td> <td> zinc finger, MIZ-type containing 2 </td> <td> ZMIZ2 </td> <td> 83637 </td> <td> NM_031449 /// NM_174929 /// XM_005249866 /// XM_005249867 /// XM_005249868 /// XM_005249869 /// XM_005249870 /// XM_005249871 /// XM_005249872 /// XM_005249873 /// XM_005249874 /// XM_005249875 /// XM_006715787 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 54.70 </td> <td> 284.40 </td> <td> 3.37 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218989_x_at </td> <td> 218989_x_at </td> <td> NM_022902 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022902.1 /DEF=Homo sapiens hypothetical protein FLJ12496 (FLJ12496), mRNA. /FEA=mRNA /GEN=FLJ12496 /PROD=hypothetical protein FLJ12496 /DB_XREF=gi:12597642 /UG=Hs.129445 hypothetical protein FLJ12496 /FL=gb:NM_022902.1 </td> <td> NM_022902 </td> <td> solute carrier family 30 (zinc transporter), member 5 </td> <td> SLC30A5 </td> <td> 64924 </td> <td> NM_001251969 /// NM_022902 /// NM_024055 /// XM_005248569 /// XM_006714672 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006824 // cobalt ion transport // inferred from direct assay /// 0006829 // zinc ion transport // inferred from direct assay /// 0006882 // cellular zinc ion homeostasis // inferred from direct assay /// 0010043 // response to zinc ion // inferred from direct assay /// 0010155 // regulation of proton transport // non-traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071577 // zinc ion transmembrane transport // inferred from direct assay </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030141 // secretory granule // inferred from direct assay /// 0030667 // secretory granule membrane // traceable author statement </td> <td> 0005385 // zinc ion transmembrane transporter activity // inferred from direct assay /// 0008270 // zinc ion binding // non-traceable author statement /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation </td> <td> 36.03 </td> <td> 96.79 </td> <td> 3.37 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200037_s_at </td> <td> 200037_s_at </td> <td> NM_016587 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016587.1 /DEF=Homo sapiens heterochromatin-like protein 1 (HECH), mRNA. /FEA=mRNA /GEN=HECH /PROD=heterochromatin-like protein 1 /DB_XREF=gi:7705406 /UG=Hs.278554 heterochromatin-like protein 1 /FL=gb:AF136630.1 gb:NM_016587.1 </td> <td> NM_016587 </td> <td> chromobox homolog 3 </td> <td> CBX3 </td> <td> 11335 </td> <td> NM_007276 /// NM_016587 /// XM_005249611 /// XM_005249612 </td> <td> 0006338 // chromatin remodeling // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0048511 // rhythmic process // inferred from electronic annotation </td> <td> 0000779 // condensed chromosome, centromeric region // inferred from sequence or structural similarity /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from sequence or structural similarity /// 0005637 // nuclear inner membrane // non-traceable author statement /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005720 // nuclear heterochromatin // inferred from direct assay /// 0005819 // spindle // inferred from direct assay /// 0031618 // nuclear centromeric heterochromatin // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 1990226 // histone methyltransferase binding // inferred from physical interaction </td> <td> 157.27 </td> <td> 580.99 </td> <td> 3.37 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202349_at </td> <td> 202349_at </td> <td> NM_000113 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000113.1 /DEF=Homo sapiens dystonia 1, torsion (autosomal dominant; torsin A) (DYT1), mRNA.  /FEA=mRNA /GEN=DYT1 /PROD=torsin A /DB_XREF=gi:4557540 /UG=Hs.19261 dystonia 1, torsion (autosomal dominant; torsin A) /FL=gb:BC000674.1 gb:AF007871.1 gb:NM_000113.1 </td> <td> NM_000113 </td> <td> torsin family 1, member A (torsin A) </td> <td> TOR1A </td> <td> 1861 </td> <td> NM_000113 </td> <td> 0000338 // protein deneddylation // inferred from mutant phenotype /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006457 // protein folding // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0006996 // organelle organization // inferred from sequence or structural similarity /// 0006998 // nuclear envelope organization // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0034504 // protein localization to nucleus // inferred from mutant phenotype /// 0034504 // protein localization to nucleus // inferred from sequence or structural similarity /// 0044319 // wound healing, spreading of cells // inferred from sequence or structural similarity /// 0045104 // intermediate filament cytoskeleton organization // inferred from mutant phenotype /// 0048489 // synaptic vesicle transport // inferred from mutant phenotype /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from direct assay /// 0051584 // regulation of dopamine uptake involved in synaptic transmission // inferred from direct assay /// 0061077 // chaperone-mediated protein folding // inferred from direct assay /// 0071712 // ER-associated misfolded protein catabolic process // inferred from sequence or structural similarity /// 0071763 // nuclear membrane organization // inferred from sequence or structural similarity /// 0072321 // chaperone-mediated protein transport // inferred from direct assay /// 1900244 // positive regulation of synaptic vesicle endocytosis // inferred from mutant phenotype /// 2000008 // regulation of protein localization to cell surface // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030141 // secretory granule // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030659 // cytoplasmic vesicle membrane // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0042406 // extrinsic component of endoplasmic reticulum membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0019894 // kinesin binding // inferred from physical interaction /// 0051082 // unfolded protein binding // traceable author statement </td> <td> 29.40 </td> <td> 142.80 </td> <td> 3.37 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 217933_s_at </td> <td> 217933_s_at </td> <td> NM_015907 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015907.1 /DEF=Homo sapiens leucine aminopeptidase (LOC51056), mRNA. /FEA=mRNA /GEN=LOC51056 /PROD=leucine aminopeptidase /DB_XREF=gi:7705687 /UG=Hs.182579 leucine aminopeptidase /FL=gb:AF061738.1 gb:NM_015907.1 </td> <td> NM_015907 </td> <td> leucine aminopeptidase 3 </td> <td> LAP3 </td> <td> 51056 </td> <td> NM_015907 </td> <td> 0006508 // proteolysis // non-traceable author statement /// 0019538 // protein metabolic process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // non-traceable author statement /// 0004177 // aminopeptidase activity // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008235 // metalloexopeptidase activity // non-traceable author statement /// 0008270 // zinc ion binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -53.27 </td> <td> 345.59 </td> <td> -3.37 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200691_s_at </td> <td> 200691_s_at </td> <td> BC000478 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000478.1 /DEF=Homo sapiens, heat shock 70kD protein 9B (mortalin-2), clone MGC:8684, mRNA, complete cds.  /FEA=mRNA /PROD=heat shock 70kD protein 9B (mortalin-2) /DB_XREF=gi:12653414 /UG=Hs.3069 heat shock 70kD protein 9B (mortalin-2) /FL=gb:BC000478.1 gb:L15189.1 gb:NM_004134.1 </td> <td> BC000478 </td> <td> heat shock 70kDa protein 9 (mortalin) </td> <td> HSPA9 </td> <td> 3313 </td> <td> NM_004134 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // traceable author statement </td> <td> -131.45 </td> <td> 488.90 </td> <td> -3.37 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 221543_s_at </td> <td> 221543_s_at </td> <td> AL442077 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL442077.1 /DEF=Homo sapiens mRNA; cDNA DKFZp667H242 (from clone DKFZp667H242); complete cds.  /FEA=mRNA /GEN=DKFZp667H242 /PROD=hypothetical protein /DB_XREF=gi:10241715 /UG=Hs.125849 chromosome 8 open reading frame 2 /FL=gb:AL442077.1 gb:NM_007175.1 </td> <td> AL442077 </td> <td> ER lipid raft associated 2 </td> <td> ERLIN2 </td> <td> 11160 </td> <td> NM_001003790 /// NM_001003791 /// NM_007175 /// XM_005273391 /// XM_005273392 /// XM_005273393 /// XM_006716280 </td> <td> 0008219 // cell death // inferred from electronic annotation /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 31.68 </td> <td> 94.46 </td> <td> 3.36 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200764_s_at </td> <td> 200764_s_at </td> <td> AI826881 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI826881 /FEA=EST /DB_XREF=gi:5447552 /DB_XREF=est:wk75f03.x1 /CLONE=IMAGE:2421245 /UG=Hs.178452 catenin (cadherin-associated protein), alpha 1 (102kD) /FL=gb:L23805.1 gb:NM_001903.1 </td> <td> AI826881 </td> <td> catenin (cadherin-associated protein), alpha 1, 102kDa </td> <td> CTNNA1 </td> <td> 1495 </td> <td> NM_001290307 /// NM_001290309 /// NM_001290310 /// NM_001290312 /// NM_001903 /// XM_005271898 /// XM_005271899 /// XM_006714536 </td> <td> 0001541 // ovarian follicle development // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016264 // gap junction assembly // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043297 // apical junction assembly // non-traceable author statement /// 0043627 // response to estrogen // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0071681 // cellular response to indole-3-methanol // inferred from direct assay /// 0090136 // epithelial cell-cell adhesion // inferred from electronic annotation /// 2000146 // negative regulation of cell motility // inferred from electronic annotation /// 2001045 // negative regulation of integrin-mediated signaling pathway // inferred from electronic annotation /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016342 // catenin complex // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0017166 // vinculin binding // inferred from physical interaction /// 0042043 // neurexin family protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0045295 // gamma-catenin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from physical interaction /// 0051015 // actin filament binding // inferred from electronic annotation </td> <td> -112.83 </td> <td> 457.56 </td> <td> -3.36 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 219558_at </td> <td> 219558_at </td> <td> NM_024524 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024524.1 /DEF=Homo sapiens hypothetical protein FLJ20986 (FLJ20986), mRNA. /FEA=mRNA /GEN=FLJ20986 /PROD=hypothetical protein FLJ20986 /DB_XREF=gi:13375667 /UG=Hs.324507 hypothetical protein FLJ20986 /FL=gb:NM_024524.1 </td> <td> NM_024524 </td> <td> ATPase type 13A3 </td> <td> ATP13A3 </td> <td> 79572 </td> <td> NM_024524 /// XM_005269357 /// XM_005269358 /// XM_005269360 /// XM_006713742 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0019829 // cation-transporting ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -67.78 </td> <td> 147.19 </td> <td> -3.36 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208690_s_at </td> <td> 208690_s_at </td> <td> BC000915 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000915.1 /DEF=Homo sapiens, Similar to LIM protein, clone MGC:5344, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to LIM protein /DB_XREF=gi:12654194 /UG=Hs.75807 PDZ and LIM domain 1 (elfin) /FL=gb:BC000915.1 </td> <td> BC000915 </td> <td> PDZ and LIM domain 1 </td> <td> PDLIM1 </td> <td> 9124 </td> <td> NM_020992 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006979 // response to oxidative stress // traceable author statement </td> <td> 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -179.52 </td> <td> 680.71 </td> <td> -3.36 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201417_at </td> <td> 201417_at </td> <td> AL136179 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL136179 /DEF=Human DNA sequence from clone RP3-322L4 on chromosome 6. Contains the SOX4 gene for SRY (sex determining region Y)-box 4, a pseudogene similar to predicted fly, worm and yeast genes, ESTs, STSs, GSSs and four CpG islands /FEA=mRNA /DB_XREF=gi:8649149 /UG=Hs.83484 SRY (sex determining region Y)-box 4 /FL=gb:NM_003107.1 </td> <td> AL136179 </td> <td> SRY (sex determining region Y)-box 4 </td> <td> SOX4 </td> <td> 6659 </td> <td> NM_003107 </td> <td> 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001841 // neural tube formation // inferred from sequence or structural similarity /// 0002328 // pro-B cell differentiation // inferred from sequence or structural similarity /// 0003183 // mitral valve morphogenesis // inferred from sequence or structural similarity /// 0003211 // cardiac ventricle formation // inferred from sequence or structural similarity /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0003289 // atrial septum primum morphogenesis // inferred from sequence or structural similarity /// 0003357 // noradrenergic neuron differentiation // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0014009 // glial cell proliferation // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021522 // spinal cord motor neuron differentiation // inferred from sequence or structural similarity /// 0021782 // glial cell development // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035910 // ascending aorta morphogenesis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042769 // DNA damage response, detection of DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046826 // negative regulation of protein export from nucleus // inferred from mutant phenotype /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0060070 // canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 0060174 // limb bud formation // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060548 // negative regulation of cell death // inferred from sequence or structural similarity /// 0060563 // neuroepithelial cell differentiation // inferred from sequence or structural similarity /// 0060993 // kidney morphogenesis // inferred from sequence or structural similarity /// 0071333 // cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 2000761 // positive regulation of N-terminal peptidyl-lysine acetylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0001071 // nucleic acid binding transcription factor activity // inferred from mutant phenotype /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> -192.30 </td> <td> 990.20 </td> <td> -3.36 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202382_s_at </td> <td> 202382_s_at </td> <td> NM_005471 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005471.1 /DEF=Homo sapiens glucosamine-6-phosphate isomerase (GNPI), mRNA. /FEA=mRNA /GEN=GNPI /PROD=glucosamine-6-phosphate isomerase /DB_XREF=gi:13027377 /UG=Hs.278500 glucosamine-6-phosphate isomerase /FL=gb:NM_005471.1 gb:AF029914.1 gb:AF048826.1 gb:D31766.1 </td> <td> NM_005471 </td> <td> glucosamine-6-phosphate deaminase 1 </td> <td> GNPDA1 </td> <td> 10007 </td> <td> NM_005471 /// XM_005268348 /// XM_006714747 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006043 // glucosamine catabolic process // inferred from mutant phenotype /// 0006044 // N-acetylglucosamine metabolic process // inferred from electronic annotation /// 0006091 // generation of precursor metabolites and energy // inferred from mutant phenotype /// 0007338 // single fertilization // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004342 // glucosamine-6-phosphate deaminase activity // inferred from mutant phenotype /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation </td> <td> 38.68 </td> <td> 92.66 </td> <td> 3.36 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 219217_at </td> <td> 219217_at </td> <td> NM_024678 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024678.1 /DEF=Homo sapiens hypothetical protein FLJ23441 (FLJ23441), mRNA. /FEA=mRNA /GEN=FLJ23441 /PROD=hypothetical protein FLJ23441 /DB_XREF=gi:13375945 /UG=Hs.90012 hypothetical protein FLJ23441 /FL=gb:NM_024678.1 </td> <td> NM_024678 </td> <td> asparaginyl-tRNA synthetase 2, mitochondrial (putative) </td> <td> NARS2 </td> <td> 79731 </td> <td> NM_001243251 /// NM_024678 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006421 // asparaginyl-tRNA aminoacylation // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004816 // asparagine-tRNA ligase activity // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> 34.40 </td> <td> 84.83 </td> <td> 3.36 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 65770_at </td> <td> 65770_at </td> <td> AI186666 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI186666:qe82a10.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-1745466 /clone_end=3' /gb=AI186666 /gi=3737304 /ug=Hs.21497 /len=512 </td> <td> AI186666 </td> <td> ras homolog family member T2 </td> <td> RHOT2 </td> <td> 89941 </td> <td> NM_138769 /// XM_005255660 /// XM_005255661 /// XM_005255662 /// XM_005255663 /// XM_005255664 /// XM_006720970 /// XM_006720971 /// XM_006720972 /// XM_006720973 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0019725 // cellular homeostasis // inferred from mutant phenotype /// 0047497 // mitochondrion transport along microtubule // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097345 // mitochondrial outer membrane permeabilization // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031307 // integral component of mitochondrial outer membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 38.88 </td> <td> 118.66 </td> <td> 3.36 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218229_s_at </td> <td> 218229_s_at </td> <td> NM_017542 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017542.1 /DEF=Homo sapiens KIAA1513 protein (KIAA1513), mRNA. /FEA=mRNA /GEN=KIAA1513 /PROD=KIAA1513 protein /DB_XREF=gi:8923835 /UG=Hs.284227 KIAA1513 protein /FL=gb:NM_017542.1 </td> <td> NM_017542 </td> <td> pogo transposable element with KRAB domain </td> <td> POGK </td> <td> 57645 </td> <td> NM_017542 /// XM_005245370 /// XM_005245371 /// XM_005245372 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // non-traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 62.85 </td> <td> 146.35 </td> <td> 3.36 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 203478_at </td> <td> 203478_at </td> <td> NM_002494 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002494.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 (6kD, KFYI) (NDUFC1), mRNA.  /FEA=mRNA /GEN=NDUFC1 /PROD=NADH dehydrogenase (ubiquinone) 1, subcomplexunknown, 1 (6kD, KFYI) /DB_XREF=gi:4505366 /UG=Hs.84549 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 (6kD, KFYI) /FL=gb:AF047184.1 gb:AF047435.1 gb:NM_002494.1 </td> <td> NM_002494 </td> <td> NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa </td> <td> NDUFC1 </td> <td> 4717 </td> <td> NM_001184986 /// NM_001184987 /// NM_001184988 /// NM_001184989 /// NM_001184990 /// NM_001184991 /// NM_002494 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> 148.08 </td> <td> 471.01 </td> <td> 3.36 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202441_at </td> <td> 202441_at </td> <td> AL568449 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL568449 /FEA=EST /DB_XREF=gi:12922799 /DB_XREF=est:AL568449 /CLONE=CS0DE001YC12 (3 prime) /UG=Hs.285818 similar to Caenorhabditis elegans protein C42C1.9 /FL=gb:AF064093.1 gb:NM_006459.1 </td> <td> AL568449 </td> <td> ER lipid raft associated 1 </td> <td> ERLIN1 </td> <td> 10613 </td> <td> NM_001100626 /// NM_006459 /// XM_005269442 </td> <td> 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 71.15 </td> <td> 347.25 </td> <td> 3.35 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 219257_s_at </td> <td> 219257_s_at </td> <td> NM_021972 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021972.1 /DEF=Homo sapiens sphingosine kinase 1 (SPHK1), mRNA. /FEA=mRNA /GEN=SPHK1 /PROD=sphingosine kinase 1 /DB_XREF=gi:11464966 /UG=Hs.68061 sphingosine kinase 1 /FL=gb:NM_021972.1 gb:AF238083.1 gb:AF200328.1 </td> <td> NM_021972 </td> <td> sphingosine kinase 1 </td> <td> SPHK1 </td> <td> 8877 </td> <td> NM_001142601 /// NM_001142602 /// NM_021972 /// NM_182965 /// XM_005257766 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001956 // positive regulation of neurotransmitter secretion // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006670 // sphingosine metabolic process // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0010803 // regulation of tumor necrosis factor-mediated signaling pathway // inferred from direct assay /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014075 // response to amine // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0019371 // cyclooxygenase pathway // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from direct assay /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0032651 // regulation of interleukin-1 beta production // inferred from electronic annotation /// 0033198 // response to ATP // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045931 // positive regulation of mitotic cell cycle // inferred from direct assay /// 0045987 // positive regulation of smooth muscle contraction // inferred from direct assay /// 0046521 // sphingoid catabolic process // non-traceable author statement /// 0046834 // lipid phosphorylation // inferred from direct assay /// 0046834 // lipid phosphorylation // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003951 // NAD+ kinase activity // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0008481 // sphinganine kinase activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0017050 // D-erythro-sphingosine kinase activity // inferred from direct assay /// 0051721 // protein phosphatase 2A binding // inferred from physical interaction </td> <td> 118.35 </td> <td> 297.68 </td> <td> 3.35 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208799_at </td> <td> 208799_at </td> <td> BC004146 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004146.1 /DEF=Homo sapiens, proteasome (prosome, macropain) subunit, beta type, 5, clone MGC:2175, mRNA, complete cds.  /FEA=mRNA /PROD=proteasome (prosome, macropain) subunit, betatype, 5 /DB_XREF=gi:13278740 /UG=Hs.78596 proteasome (prosome, macropain) subunit, beta type, 5 /FL=gb:BC004146.1 gb:NM_002797.1 gb:D29011.1 </td> <td> BC004146 </td> <td> proteasome (prosome, macropain) subunit, beta type, 5 </td> <td> PSMB5 </td> <td> 5693 </td> <td> NM_001130725 /// NM_001144932 /// NM_002797 /// XM_005267871 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 92.05 </td> <td> 567.60 </td> <td> 3.35 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 205992_s_at </td> <td> 205992_s_at </td> <td> NM_000585 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000585.1 /DEF=Homo sapiens interleukin 15 (IL15), mRNA. /FEA=mRNA /GEN=IL15 /PROD=interleukin 15 /DB_XREF=gi:10835152 /UG=Hs.168132 interleukin 15 /FL=gb:NM_000585.1 gb:U14407.1 </td> <td> NM_000585 </td> <td> interleukin 15 </td> <td> IL15 </td> <td> 3600 </td> <td> NM_000585 /// NM_172174 /// NM_172175 /// NR_037840 </td> <td> 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0001866 // NK T cell proliferation // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0014732 // skeletal muscle atrophy // inferred from electronic annotation /// 0030212 // hyaluronan metabolic process // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032740 // positive regulation of interleukin-17 production // inferred from direct assay /// 0032819 // positive regulation of natural killer cell proliferation // inferred from electronic annotation /// 0032825 // positive regulation of natural killer cell differentiation // inferred from electronic annotation /// 0034105 // positive regulation of tissue remodeling // inferred by curator /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0045062 // extrathymic T cell selection // inferred from electronic annotation /// 0045580 // regulation of T cell differentiation // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048535 // lymph node development // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050691 // regulation of defense response to virus by host // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0050778 // positive regulation of immune response // inferred from electronic annotation /// 0071305 // cellular response to vitamin D // inferred from electronic annotation </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // traceable author statement </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -36.17 </td> <td> 38.09 </td> <td> -3.35 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 210844_x_at </td> <td> 210844_x_at </td> <td> D14705 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D14705.1 /DEF=Human mRNA for alpha-catenin, complete cds. /FEA=mRNA /PROD=human alpha-catenin /DB_XREF=gi:415305 /UG=Hs.178452 catenin (cadherin-associated protein), alpha 1 (102kD) /FL=gb:BC000385.1 gb:D14705.1 gb:D13866.1 </td> <td> D14705 </td> <td> catenin (cadherin-associated protein), alpha 1, 102kDa </td> <td> CTNNA1 </td> <td> 1495 </td> <td> NM_001290307 /// NM_001290309 /// NM_001290310 /// NM_001290312 /// NM_001903 /// XM_005271898 /// XM_005271899 /// XM_006714536 </td> <td> 0001541 // ovarian follicle development // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016264 // gap junction assembly // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043297 // apical junction assembly // non-traceable author statement /// 0043627 // response to estrogen // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0071681 // cellular response to indole-3-methanol // inferred from direct assay /// 0090136 // epithelial cell-cell adhesion // inferred from electronic annotation /// 2000146 // negative regulation of cell motility // inferred from electronic annotation /// 2001045 // negative regulation of integrin-mediated signaling pathway // inferred from electronic annotation /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016342 // catenin complex // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0017166 // vinculin binding // inferred from physical interaction /// 0042043 // neurexin family protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0045295 // gamma-catenin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from physical interaction /// 0051015 // actin filament binding // inferred from electronic annotation </td> <td> -215.32 </td> <td> 1018.81 </td> <td> -3.35 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209238_at </td> <td> 209238_at </td> <td> BE966922 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE966922 /FEA=EST /DB_XREF=gi:11772839 /DB_XREF=est:601660942R1 /CLONE=IMAGE:3915610 /UG=Hs.82240 syntaxin 3A /FL=gb:AJ002076.1 gb:NM_004177.1 gb:U32315.1 </td> <td> BE966922 </td> <td> syntaxin 3 </td> <td> STX3 </td> <td> 6809 </td> <td> NM_001178040 /// NM_004177 /// XM_005274195 /// XM_005274196 /// XM_005274198 /// XM_005274199 /// XM_005274200 /// XM_006718672 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0061025 // membrane fusion // inferred from electronic annotation </td> <td> 0005773 // vacuole // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030141 // secretory granule // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0031201 // SNARE complex // inferred from sequence or structural similarity /// 0042581 // specific granule // inferred from direct assay /// 0042582 // azurophil granule // inferred from direct assay /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050544 // arachidonic acid binding // inferred from sequence or structural similarity </td> <td> 49.30 </td> <td> 127.25 </td> <td> 3.35 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212887_at </td> <td> 212887_at </td> <td> AI753659 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI753659 /FEA=EST /DB_XREF=gi:5131923 /DB_XREF=est:cr13e03.x1 /CLONE=HBMSC_cr13e03 /UG=Hs.321403 Homo sapiens mRNA; cDNA DKFZp564O2363 (from clone DKFZp564O2363) </td> <td> AI753659 </td> <td> Sec23 homolog A (S. cerevisiae) </td> <td> SEC23A </td> <td> 10484 </td> <td> NM_006364 /// XM_005267262 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // inferred from electronic annotation /// 0030868 // smooth endoplasmic reticulum membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation </td> <td> 132.98 </td> <td> 423.06 </td> <td> 3.35 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202209_at </td> <td> 202209_at </td> <td> NM_014463 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014463.1 /DEF=Homo sapiens Lsm3 protein (LSM3), mRNA. /FEA=mRNA /GEN=LSM3 /PROD=Lsm3 protein /DB_XREF=gi:7657314 /UG=Hs.111632 Lsm3 protein /FL=gb:AF182418.1 gb:AF182289.1 gb:NM_014463.1 </td> <td> NM_014463 </td> <td> LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) </td> <td> LSM3 </td> <td> 27258 </td> <td> NM_014463 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 49.83 </td> <td> 208.74 </td> <td> 3.35 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 217226_s_at </td> <td> 217226_s_at </td> <td> M95929 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:M95929.1 /DEF=Human homeobox protein (PHOX1) mRNA, 3 end. /FEA=mRNA /GEN=PHOX1 /PROD=homeobox protein /DB_XREF=gi:189946 /UG=Hs.155606 paired mesoderm homeo box 1 </td> <td> M95929 </td> <td> sideroflexin 3 </td> <td> SFXN3 </td> <td> 81855 </td> <td> NM_030971 /// XR_428720 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0071837 // HMG box domain binding // inferred from electronic annotation </td> <td> 69.50 </td> <td> 118.80 </td> <td> 3.35 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218090_s_at </td> <td> 218090_s_at </td> <td> NM_018117 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018117.8 /DEF=Homo sapiens WD40 repeat domain 11 protein (WDR11), mRNA. /FEA=mRNA /GEN=WDR11 /PROD=WD40 repeat domain 11 protein /DB_XREF=gi:13324687 /UG=Hs.16677 WD repeat domain 15 /FL=gb:AF320223.1 gb:NM_018117.8 </td> <td> NM_018117 </td> <td> WD repeat domain 11 </td> <td> WDR11 </td> <td> 55717 </td> <td> NM_018117 /// XM_005269962 /// XM_005269963 /// XM_005269964 /// XR_246098 /// XR_428707 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -43.80 </td> <td> 181.12 </td> <td> -3.35 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200716_x_at </td> <td> 200716_x_at </td> <td> NM_012423 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012423.1 /DEF=Homo sapiens ribosomal protein L13a (RPL13A), mRNA. /FEA=mRNA /GEN=RPL13A /PROD=ribosomal protein L13a /DB_XREF=gi:6912633 /UG=Hs.119122 ribosomal protein L13a /FL=gb:BC000514.1 gb:NM_012423.1 </td> <td> NM_012423 </td> <td> ribosomal protein L13a /// ribosomal protein L13a pseudogene 5 /// small nucleolar RNA, C/D box 32A /// small nucleolar RNA, C/D box 33 /// small nucleolar RNA, C/D box 34 /// small nucleolar RNA, C/D box 35A </td> <td> RPL13A /// RPL13AP5 /// SNORD32A /// SNORD33 /// SNORD34 /// SNORD35A </td> <td> 23521 /// 26816 /// 26817 /// 26818 /// 26819 /// 728658 </td> <td> NM_001270491 /// NM_012423 /// NR_000018 /// NR_000019 /// NR_000020 /// NR_000021 /// NR_026712 /// NR_073024 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071346 // cellular response to interferon-gamma // inferred from direct assay /// 1901194 // negative regulation of formation of translation preinitiation complex // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015934 // large ribosomal subunit // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -968.12 </td> <td> 3943.36 </td> <td> -3.35 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 204735_at </td> <td> 204735_at </td> <td> NM_006202 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006202.1 /DEF=Homo sapiens phosphodiesterase 4A, cAMP-specific (dunce (Drosophila)-homolog phosphodiesterase E2) (PDE4A), mRNA.  /FEA=mRNA /GEN=PDE4A /PROD=phosphodiesterase 4A, cAMP-specific (dunce(Drosophila)-homolog phosphodiesterase E2) /DB_XREF=gi:5453861 /UG=Hs.89901 phosphodiesterase 4A, cAMP-specific (dunce (Drosophila)-homolog phosphodiesterase E2) /FL=gb:U97584.1 gb:U68532.1 gb:NM_006202.1 </td> <td> NM_006202 </td> <td> phosphodiesterase 4A, cAMP-specific </td> <td> PDE4A </td> <td> 5141 </td> <td> NM_001111307 /// NM_001111308 /// NM_001111309 /// NM_001243121 /// NM_006202 /// XM_005259933 /// XM_006722765 </td> <td> 0006198 // cAMP catabolic process // inferred from direct assay /// 0006198 // cAMP catabolic process // inferred from electronic annotation /// 0006198 // cAMP catabolic process // inferred from genetic interaction /// 0006198 // cAMP catabolic process // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010738 // regulation of protein kinase A signaling // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0043949 // regulation of cAMP-mediated signaling // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from direct assay /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from genetic interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from genetic interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 36.00 </td> <td> 71.70 </td> <td> 3.35 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209694_at </td> <td> 209694_at </td> <td> M97655 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M97655.1 /DEF=Human 6-pyruvoyltetrahydropterin synthase (PTS) mRNA, complete cds. /FEA=mRNA /GEN=PTS /PROD=6-pyruvoyltetrahydropterin synthase /DB_XREF=gi:306438 /UG=Hs.366 6-pyruvoyltetrahydropterin synthase /FL=gb:M97655.1 gb:NM_000317.1 gb:D17400.1 </td> <td> M97655 </td> <td> 6-pyruvoyltetrahydropterin synthase </td> <td> PTS </td> <td> 5805 </td> <td> NM_000317 </td> <td> 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006729 // tetrahydrobiopterin biosynthetic process // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0003874 // 6-pyruvoyltetrahydropterin synthase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 84.13 </td> <td> 236.91 </td> <td> 3.34 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208931_s_at </td> <td> 208931_s_at </td> <td> AF147209 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF147209.1 /DEF=Homo sapiens double-stranded RNA-binding nuclear protein DRBP76 mRNA, complete cds.  /FEA=mRNA /PROD=double-stranded RNA-binding nuclear proteinDRBP76 /DB_XREF=gi:4929370 /UG=Hs.256583 interleukin enhancer binding factor 3, 90kD /FL=gb:AF147209.1 gb:AF167569.1 </td> <td> AF147209 </td> <td> interleukin enhancer binding factor 3, 90kDa </td> <td> ILF3 </td> <td> 3609 </td> <td> NM_001137673 /// NM_004516 /// NM_012218 /// NM_017620 /// NM_153464 /// XM_005259895 /// XM_006722742 </td> <td> 0000279 // M phase // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0045071 // negative regulation of viral genome replication // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003723 // RNA binding // non-traceable author statement /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 69.60 </td> <td> 237.45 </td> <td> 3.34 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201583_s_at </td> <td> 201583_s_at </td> <td> NM_006363 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006363.1 /DEF=Homo sapiens Sec23 (S. cerevisiae) homolog B (SEC23B), mRNA. /FEA=mRNA /GEN=SEC23B /PROD=Sec23 (S. cerevisiae) homolog B /DB_XREF=gi:5454043 /UG=Hs.173497 Sec23 (S. cerevisiae) homolog B /FL=gb:BC005404.1 gb:NM_006363.1 </td> <td> NM_006363 </td> <td> Sec23 homolog B (S. cerevisiae) </td> <td> SEC23B </td> <td> 10483 </td> <td> NM_001172745 /// NM_001172746 /// NM_006363 /// NM_032985 /// NM_032986 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0030127 // COPII vesicle coat // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0008270 // zinc ion binding // inferred from electronic annotation </td> <td> 31.42 </td> <td> 118.74 </td> <td> 3.34 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201202_at </td> <td> 201202_at </td> <td> NM_002592 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002592.1 /DEF=Homo sapiens proliferating cell nuclear antigen (PCNA), mRNA. /FEA=mRNA /GEN=PCNA /PROD=proliferating cell nuclear antigen /DB_XREF=gi:4505640 /UG=Hs.78996 proliferating cell nuclear antigen /FL=gb:BC000491.1 gb:M15796.1 gb:NM_002592.1 </td> <td> NM_002592 </td> <td> proliferating cell nuclear antigen </td> <td> PCNA </td> <td> 5111 </td> <td> NM_002592 /// NM_182649 </td> <td> 0000077 // DNA damage checkpoint // inferred from electronic annotation /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006272 // leading strand elongation // not recorded /// 0006275 // regulation of DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006298 // mismatch repair // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0019985 // translesion synthesis // inferred from direct assay /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0032077 // positive regulation of deoxyribonuclease activity // inferred from direct assay /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0033993 // response to lipid // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005663 // DNA replication factor C complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0030896 // checkpoint clamp complex // inferred from electronic annotation /// 0043596 // nuclear replication fork // inferred from direct assay /// 0043626 // PCNA complex // not recorded /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070557 // PCNA-p21 complex // inferred from direct assay </td> <td> 0000701 // purine-specific mismatch base pair DNA N-glycosylase activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030337 // DNA polymerase processivity factor activity // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0032139 // dinucleotide insertion or deletion binding // inferred from direct assay /// 0032405 // MutLalpha complex binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0070182 // DNA polymerase binding // inferred from physical interaction </td> <td> 161.45 </td> <td> 221.93 </td> <td> 3.34 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 204274_at </td> <td> 204274_at </td> <td> AA812215 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA812215 /FEA=EST /DB_XREF=gi:2881826 /DB_XREF=est:ob84g01.s1 /CLONE=IMAGE:1338096 /UG=Hs.9222 estrogen receptor binding site associated, antigen, 9 /FL=gb:BC005249.1 gb:AF006265.1 gb:AB007619.1 gb:NM_004215.1 </td> <td> AA812215 </td> <td> estrogen receptor binding site associated, antigen, 9 </td> <td> EBAG9 </td> <td> 9166 </td> <td> NM_001278938 /// NM_004215 /// NM_198120 </td> <td> 0001558 // regulation of cell growth // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0016505 // peptidase activator activity involved in apoptotic process // non-traceable author statement </td> <td> 30.55 </td> <td> 68.42 </td> <td> 3.34 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 210104_at </td> <td> 210104_at </td> <td> AF074723 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF074723.1 /DEF=Homo sapiens RNA polymerase transcriptional regulation mediator (MED6) mRNA, complete cds.  /FEA=mRNA /GEN=MED6 /PROD=RNA polymerase transcriptional regulationmediator /DB_XREF=gi:3329505 /UG=Hs.167738 RNA polymerase II transcriptional regulation mediator (Med6, S. cerevisiae, homolog of) /FL=gb:BC004106.1 gb:AF074723.1 </td> <td> AF074723 </td> <td> mediator complex subunit 6 </td> <td> MED6 </td> <td> 10001 </td> <td> NM_001284209 /// NM_001284210 /// NM_001284211 /// NM_005466 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from mutant phenotype </td> <td> 0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction </td> <td> 36.73 </td> <td> 72.61 </td> <td> 3.34 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201798_s_at </td> <td> 201798_s_at </td> <td> NM_013451 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013451.1 /DEF=Homo sapiens fer-1 (C.elegans)-like 3 (myoferlin) (FER1L3), mRNA. /FEA=mRNA /GEN=FER1L3 /PROD=fer-1 (C.elegans)-like 3 (myoferlin) /DB_XREF=gi:7305052 /UG=Hs.234680 fer-1 (C.elegans)-like 3 (myoferlin) /FL=gb:AF182316.1 gb:NM_013451.1 </td> <td> NM_013451 </td> <td> myoferlin </td> <td> MYOF </td> <td> 26509 </td> <td> NM_013451 /// NM_133337 /// XM_005269693 /// XM_005269694 /// XM_006717760 </td> <td> 0001778 // plasma membrane repair // inferred from sequence or structural similarity /// 0006936 // muscle contraction // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0030947 // regulation of vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0034605 // cellular response to heat // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005901 // caveola // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from direct assay /// 0005543 // phospholipid binding // inferred from sequence or structural similarity </td> <td> -94.60 </td> <td> 1067.42 </td> <td> -3.34 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212708_at </td> <td> 212708_at </td> <td> AV721987 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV721987 /FEA=EST /DB_XREF=gi:10824025 /DB_XREF=est:AV721987 /CLONE=HTBAFB10 /UG=Hs.184779 Homo sapiens mRNA; cDNA DKFZp586B1922 (from clone DKFZp586B1922) </td> <td> AV721987 </td> <td> male-specific lethal 1 homolog (Drosophila) </td> <td> MSL1 </td> <td> 339287 </td> <td> NM_001012241 /// XM_005257298 /// XM_005257299 </td> <td> 0006325 // chromatin organization // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043984 // histone H4-K16 acetylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0072487 // MSL complex // inferred from direct assay </td> <td>  </td> <td> 70.62 </td> <td> 200.06 </td> <td> 3.33 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202360_at </td> <td> 202360_at </td> <td> NM_014757 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014757.2 /DEF=Homo sapiens mastermind (Drosophila), homolog of (MAML1), mRNA. /FEA=mRNA /GEN=MAML1 /PROD=homolog of Drosophila mastermind /DB_XREF=gi:13376996 /UG=Hs.76986 mastermind (Drosophila), homolog of /FL=gb:NM_014757.2 gb:D83785.1 </td> <td> NM_014757 </td> <td> mastermind-like 1 (Drosophila) </td> <td> MAML1 </td> <td> 9794 </td> <td> NM_014757 </td> <td> 0003162 // atrioventricular node development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010831 // positive regulation of myotube differentiation // inferred from genetic interaction /// 0045445 // myoblast differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051149 // positive regulation of muscle cell differentiation // inferred from electronic annotation /// 0060928 // atrioventricular node cell development // inferred from sequence or structural similarity </td> <td> 0002193 // MAML1-RBP-Jkappa- ICN1 complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042605 // peptide antigen binding // inferred from physical interaction </td> <td> 47.80 </td> <td> 172.65 </td> <td> 3.33 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209864_at </td> <td> 209864_at </td> <td> AB045118 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB045118.1 /DEF=Homo sapiens FRAT2 mRNA, complete cds. /FEA=mRNA /GEN=FRAT2 /PROD=FRAT2 /DB_XREF=gi:13365650 /UG=Hs.140720 GSK-3 binding protein FRAT2 /FL=gb:AB045118.1 </td> <td> AB045118 </td> <td> frequently rearranged in advanced T-cell lymphomas 2 </td> <td> FRAT2 </td> <td> 23401 </td> <td> NM_012083 </td> <td> 0007275 // multicellular organismal development // non-traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation </td> <td>  </td> <td>  </td> <td> -32.98 </td> <td> 75.19 </td> <td> -3.33 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 203350_at </td> <td> 203350_at </td> <td> NM_001128 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001128.1 /DEF=Homo sapiens adaptor-related protein complex 1, gamma 1 subunit (AP1G1), mRNA.  /FEA=mRNA /GEN=AP1G1 /PROD=adaptor-related protein complex 1, gamma 1subunit /DB_XREF=gi:4501978 /UG=Hs.5344 adaptor-related protein complex 1, gamma 1 subunit /FL=gb:AB015317.1 gb:NM_001128.1 </td> <td> NM_001128 </td> <td> adaptor-related protein complex 1, gamma 1 subunit </td> <td> AP1G1 </td> <td> 164 </td> <td> NM_001030007 /// NM_001128 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0032438 // melanosome organization // inferred by curator /// 0035646 // endosome to melanosome transport // inferred from mutant phenotype /// 0043323 // positive regulation of natural killer cell degranulation // inferred from mutant phenotype /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0061024 // membrane organization // traceable author statement /// 0090160 // Golgi to lysosome transport // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030119 // AP-type membrane coat adaptor complex // traceable author statement /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0030665 // clathrin-coated vesicle membrane // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay </td> <td> 0005215 // transporter activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from physical interaction /// 0030742 // GTP-dependent protein binding // inferred from physical interaction </td> <td> -40.30 </td> <td> 106.38 </td> <td> -3.33 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209076_s_at </td> <td> 209076_s_at </td> <td> BC000974 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000974.2 /DEF=Homo sapiens, Similar to hypothetical protein 628, clone MGC:5116, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to hypothetical protein 628 /DB_XREF=gi:12803025 /UG=Hs.181349 hypothetical protein 628 /FL=gb:BC000974.2 </td> <td> BC000974 </td> <td> WD repeat domain 45B </td> <td> WDR45B </td> <td> 56270 </td> <td> NM_019613 /// XM_005256377 /// XM_005256378 /// XM_006722285 /// XR_243524 </td> <td> 0000045 // autophagic vacuole assembly // not recorded </td> <td> 0005737 // cytoplasm // not recorded </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // not recorded /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // not recorded </td> <td> -156.98 </td> <td> 489.51 </td> <td> -3.32 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212627_s_at </td> <td> 212627_s_at </td> <td> AL581473 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL581473 /FEA=EST /DB_XREF=gi:12948508 /DB_XREF=est:AL581473 /CLONE=CS0DG004YK09 (3 prime) /UG=Hs.182877 KIAA0116 protein </td> <td> AL581473 </td> <td> exosome component 7 </td> <td> EXOSC7 </td> <td> 23016 </td> <td> NM_015004 /// NR_023353 /// XM_006713035 /// XR_245104 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006364 // rRNA processing // traceable author statement /// 0006401 // RNA catabolic process // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090503 // RNA phosphodiester bond hydrolysis, exonucleolytic // traceable author statement </td> <td> 0000178 // exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0000175 // 3'-5'-exoribonuclease activity // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004532 // exoribonuclease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 61.80 </td> <td> 115.08 </td> <td> 3.32 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 203034_s_at </td> <td> 203034_s_at </td> <td> NM_000990 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000990.1 /DEF=Homo sapiens ribosomal protein L27a (RPL27A), mRNA. /FEA=mRNA /GEN=RPL27A /PROD=ribosomal protein L27a /DB_XREF=gi:4506624 /UG=Hs.76064 ribosomal protein L27a /FL=gb:BC005326.1 gb:NM_000990.1 gb:U14968.1 </td> <td> NM_000990 </td> <td> ribosomal protein L27a /// small nucleolar RNA, H/ACA box 45A </td> <td> RPL27A /// SNORA45A </td> <td> 6157 /// 619562 </td> <td> NM_000990 /// NM_032650 /// NR_002580 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006744 // ubiquinone biosynthetic process // inferred from electronic annotation /// 0006744 // ubiquinone biosynthetic process // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0009234 // menaquinone biosynthetic process // inferred from electronic annotation /// 0009234 // menaquinone biosynthetic process // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042371 // vitamin K biosynthetic process // inferred from direct assay /// 0042371 // vitamin K biosynthetic process // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030173 // integral component of Golgi membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0004659 // prenyltransferase activity // inferred from direct assay /// 0004659 // prenyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016209 // antioxidant activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -869.35 </td> <td> 4334.45 </td> <td> -3.32 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 221532_s_at </td> <td> 221532_s_at </td> <td> AF309553 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF309553.1 /DEF=Homo sapiens meiotic recombination protein REC14 mRNA, complete cds.  /FEA=mRNA /PROD=meiotic recombination protein REC14 /DB_XREF=gi:11139241 /UG=Hs.296242 recombination protein REC14 /FL=gb:AF309553.1 gb:NM_025234.1 </td> <td> AF309553 </td> <td> WD repeat domain 61 </td> <td> WDR61 </td> <td> 80349 </td> <td> NM_025234 /// XM_005254698 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0032968 // positive regulation of transcription elongation from RNA polymerase II promoter // inferred from direct assay /// 0045638 // negative regulation of myeloid cell differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from mutant phenotype /// 0080182 // histone H3-K4 trimethylation // inferred from mutant phenotype /// 2001162 // positive regulation of histone H3-K79 methylation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016593 // Cdc73/Paf1 complex // inferred from direct assay /// 0035327 // transcriptionally active chromatin // inferred from direct assay /// 0055087 // Ski complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 59.97 </td> <td> 209.84 </td> <td> 3.32 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209990_s_at </td> <td> 209990_s_at </td> <td> AF056085 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF056085.1 /DEF=Homo sapiens GABA-B receptor mRNA, complete cds. /FEA=mRNA /PROD=GABA-B receptor /DB_XREF=gi:3719225 /UG=Hs.198612 G protein-coupled receptor 51 /FL=gb:AF056085.1 gb:AF069755.1 gb:AF074483.1 gb:NM_005458.1 gb:AF099033.1 </td> <td> AF056085 </td> <td> gamma-aminobutyric acid (GABA) B receptor, 2 </td> <td> GABBR2 </td> <td> 9568 </td> <td> NM_005458 /// XM_005252316 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007194 // negative regulation of adenylate cyclase activity // traceable author statement /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0038039 // G-protein coupled receptor heterodimeric complex // inferred from physical interaction /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 72.47 </td> <td> 120.99 </td> <td> 3.32 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 214946_x_at </td> <td> 214946_x_at </td> <td> AV728658 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV728658 /FEA=EST /DB_XREF=gi:10838079 /DB_XREF=est:AV728658 /CLONE=HTCALE08 /UG=Hs.13273 KIAA0592 protein </td> <td> AV728658 </td> <td> family with sequence similarity 21, member A /// family with sequence similarity 21, member C /// uncharacterized LOC101930591 </td> <td> FAM21A /// FAM21C /// LOC101930591 </td> <td> 253725 /// 387680 /// 101930591 </td> <td> NM_001005751 /// NM_001169106 /// NM_001169107 /// NM_001291398 /// NM_015262 /// NM_018232 /// XM_005269805 /// XM_005269806 /// XM_005269807 /// XM_005269808 /// XM_005269810 /// XM_006717831 /// XM_006717832 /// XR_247516 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0042147 // retrograde transport, endosome to Golgi // inferred from sequence or structural similarity </td> <td> 0005768 // endosome // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0071203 // WASH complex // inferred from direct assay /// 0071203 // WASH complex // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -52.03 </td> <td> 157.16 </td> <td> -3.32 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 203138_at </td> <td> 203138_at </td> <td> NM_003642 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003642.1 /DEF=Homo sapiens histone acetyltransferase 1 (HAT1), mRNA. /FEA=mRNA /GEN=HAT1 /PROD=histone acetyltransferase 1 /DB_XREF=gi:4504340 /UG=Hs.13340 histone acetyltransferase 1 /FL=gb:AF030424.1 gb:NM_003642.1 </td> <td> NM_003642 </td> <td> histone acetyltransferase 1 </td> <td> HAT1 </td> <td> 8520 </td> <td> NM_001033085 /// NM_003642 /// NR_027862 /// XM_006712808 </td> <td> 0006323 // DNA packaging // traceable author statement /// 0006325 // chromatin organization // traceable author statement /// 0006335 // DNA replication-dependent nucleosome assembly // inferred from direct assay /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0006348 // chromatin silencing at telomere // inferred from electronic annotation /// 0006475 // internal protein amino acid acetylation // traceable author statement /// 0007584 // response to nutrient // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation </td> <td> 32.85 </td> <td> 131.70 </td> <td> 3.32 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212126_at </td> <td> 212126_at </td> <td> BG391282 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG391282 /FEA=EST /DB_XREF=gi:13284730 /DB_XREF=est:602417327F1 /CLONE=IMAGE:4536582 /UG=Hs.306000 hypothetical protein FLJ10624 </td> <td> BG391282 </td> <td> chromobox homolog 5 </td> <td> CBX5 </td> <td> 23468 </td> <td> NM_001127321 /// NM_001127322 /// NM_012117 </td> <td> 0007596 // blood coagulation // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype </td> <td> 0000118 // histone deacetylase complex // inferred from sequence or structural similarity /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0010369 // chromocenter // inferred from electronic annotation /// 0016605 // PML body // inferred from mutant phenotype /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0031618 // nuclear centromeric heterochromatin // non-traceable author statement /// 0035097 // histone methyltransferase complex // inferred from sequence or structural similarity </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030674 // protein binding, bridging // inferred from sequence or structural similarity /// 0035064 // methylated histone binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from sequence or structural similarity /// 1990226 // histone methyltransferase binding // inferred from physical interaction </td> <td> 58.05 </td> <td> 146.90 </td> <td> 3.31 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212175_s_at </td> <td> 212175_s_at </td> <td> AL513611 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL513611 /FEA=EST /DB_XREF=gi:12777105 /DB_XREF=est:AL513611 /CLONE=XCL0BB001ZB07 (3 prime) /UG=Hs.171811 adenylate kinase 2 </td> <td> AL513611 </td> <td> adenylate kinase 2 </td> <td> AK2 </td> <td> 204 </td> <td> NM_001199199 /// NM_001625 /// NM_013411 /// NR_037591 /// NR_037592 /// XR_246248 </td> <td> 0001889 // liver development // inferred from electronic annotation /// 0006119 // oxidative phosphorylation // inferred from electronic annotation /// 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006172 // ADP biosynthetic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046033 // AMP metabolic process // inferred from electronic annotation /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0046060 // dATP metabolic process // inferred from electronic annotation /// 0046939 // nucleotide phosphorylation // inferred from electronic annotation /// 0046939 // nucleotide phosphorylation // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0097066 // response to thyroid hormone // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0036126 // sperm flagellum // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097226 // sperm mitochondrial sheath // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004017 // adenylate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016776 // phosphotransferase activity, phosphate group as acceptor // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation </td> <td> 39.33 </td> <td> 182.79 </td> <td> 3.31 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 211037_s_at </td> <td> 211037_s_at </td> <td> BC006309 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006309.1 /DEF=Homo sapiens, Similar to RIKEN cDNA 5730589L02 gene, clone MGC:13124, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to RIKEN cDNA 5730589L02 gene /DB_XREF=gi:13623420 /FL=gb:BC006309.1 </td> <td> BC006309 </td> <td> membrane bound O-acyltransferase domain containing 7 </td> <td> MBOAT7 </td> <td> 79143 </td> <td> NM_001146056 /// NM_001146082 /// NM_001146083 /// NM_024298 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0021591 // ventricular system development // inferred from electronic annotation /// 0036149 // phosphatidylinositol acyl-chain remodeling // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation </td> <td> 31.22 </td> <td> 44.29 </td> <td> 3.31 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 213656_s_at </td> <td> 213656_s_at </td> <td> BF593594 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF593594 /FEA=EST /DB_XREF=gi:11685918 /DB_XREF=est:7q12a08.x1 /CLONE=IMAGE:3697839 /UG=Hs.274440 Homo sapiens mRNA; cDNA DKFZp434I139 (from clone DKFZp434I139) </td> <td> BF593594 </td> <td> kinesin light chain 1 </td> <td> KLC1 </td> <td> 3831 </td> <td> NM_001130107 /// NM_005552 /// NM_182923 </td> <td> 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008088 // axon cargo transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0035418 // protein localization to synapse // inferred from electronic annotation /// 0035617 // stress granule disassembly // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from sequence or structural similarity /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043227 // membrane-bounded organelle // inferred from electronic annotation </td> <td> 0003774 // motor activity // traceable author statement /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015631 // tubulin binding // inferred from electronic annotation </td> <td> -95.05 </td> <td> 351.18 </td> <td> -3.31 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 213281_at </td> <td> 213281_at </td> <td> BE327172 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE327172 /FEA=EST /DB_XREF=gi:9200948 /DB_XREF=est:hw08a05.x1 /CLONE=IMAGE:3182288 /UG=Hs.78465 v-jun avian sarcoma virus 17 oncogene homolog </td> <td> BE327172 </td> <td> jun proto-oncogene </td> <td> JUN </td> <td> 3725 </td> <td> NM_002228 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001774 // microglial cell activation // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007184 // SMAD protein import into nucleus // inferred from direct assay /// 0007568 // aging // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0031953 // negative regulation of protein autophosphorylation // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035026 // leading edge cell differentiation // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043922 // negative regulation by host of viral transcription // inferred from direct assay /// 0043923 // positive regulation by host of viral transcription // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045657 // positive regulation of monocyte differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051365 // cellular response to potassium ion starvation // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from electronic annotation </td> <td> 0000228 // nuclear chromosome // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from electronic annotation </td> <td> 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred by curator /// 0003677 // DNA binding // traceable author statement /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070412 // R-SMAD binding // inferred from physical interaction /// 0071837 // HMG box domain binding // inferred from electronic annotation </td> <td> -49.10 </td> <td> 124.25 </td> <td> -3.31 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201385_at </td> <td> 201385_at </td> <td> NM_001358 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001358.1 /DEF=Homo sapiens DEADH (Asp-Glu-Ala-AspHis) box polypeptide 15 (DDX15), mRNA.  /FEA=mRNA /GEN=DDX15 /PROD=DEADH (Asp-Glu-Ala-AspHis) box polypeptide 15 /DB_XREF=gi:4557516 /UG=Hs.5683 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 15 /FL=gb:AB001636.1 gb:NM_001358.1 gb:AF279891.1 </td> <td> NM_001358 </td> <td> DEAH (Asp-Glu-Ala-His) box helicase 15 </td> <td> DHX15 </td> <td> 1665 </td> <td> NM_001358 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // inferred by curator </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0071008 // U2-type post-mRNA release spliceosomal complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 173.10 </td> <td> 957.90 </td> <td> 3.31 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218135_at </td> <td> 218135_at </td> <td> NM_016570 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016570.1 /DEF=Homo sapiens CDA14 (LOC51290), mRNA. /FEA=mRNA /GEN=LOC51290 /PROD=CDA14 /DB_XREF=gi:7706104 /UG=Hs.26813 CDA14 /FL=gb:BC000887.1 gb:AF216751.1 gb:NM_016570.1 gb:AF183410.1 </td> <td> NM_016570 </td> <td> ERGIC and golgi 2 </td> <td> ERGIC2 </td> <td> 51290 </td> <td> NM_016570 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from direct assay /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td>  </td> <td> 40.67 </td> <td> 121.41 </td> <td> 3.31 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 203542_s_at </td> <td> 203542_s_at </td> <td> AI690205 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI690205 /FEA=EST /DB_XREF=gi:4901499 /DB_XREF=est:tx33d02.x1 /CLONE=IMAGE:2271363 /UG=Hs.150557 basic transcription element binding protein 1 /FL=gb:NM_001206.1 gb:D31716.1 </td> <td> AI690205 </td> <td> Kruppel-like factor 9 </td> <td> KLF9 </td> <td> 687 </td> <td> NM_001206 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0050847 // progesterone receptor signaling pathway // inferred from electronic annotation /// 0097067 // cellular response to thyroid hormone stimulus // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -34.75 </td> <td> 92.30 </td> <td> -3.31 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218563_at </td> <td> 218563_at </td> <td> NM_004542 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004542.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 (9kD, B9) (NDUFA3), mRNA.  /FEA=mRNA /GEN=NDUFA3 /PROD=NADH dehydrogenase (ubiquinone) 1 alphasubcomplex, 3 (9kD, B9) /DB_XREF=gi:4758771 /UG=Hs.198269 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 (9kD, B9) /FL=gb:AF044955.1 gb:AF070653.1 gb:NM_004542.1 </td> <td> NM_004542 </td> <td> NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa </td> <td> NDUFA3 </td> <td> 4696 </td> <td> NM_004542 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> 53.40 </td> <td> 206.35 </td> <td> 3.31 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 207700_s_at </td> <td> 207700_s_at </td> <td> NM_006534 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006534.1 /DEF=Homo sapiens nuclear receptor coactivator 3 (NCOA3), mRNA. /FEA=mRNA /GEN=NCOA3 /PROD=nuclear receptor coactivator 3 /DB_XREF=gi:5729725 /UG=Hs.225977 nuclear receptor coactivator 3 /FL=gb:AF036892.1 gb:NM_006534.1 </td> <td> NM_006534 </td> <td> nuclear receptor coactivator 3 </td> <td> NCOA3 </td> <td> 8202 </td> <td> NM_001174087 /// NM_001174088 /// NM_006534 /// NM_181659 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0016573 // histone acetylation // inferred from direct assay /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035624 // receptor transactivation // traceable author statement /// 0045618 // positive regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048589 // developmental growth // inferred from electronic annotation /// 0060068 // vagina development // inferred from electronic annotation /// 0060713 // labyrinthine layer morphogenesis // inferred from electronic annotation /// 0060744 // mammary gland branching involved in thelarche // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from electronic annotation /// 0035257 // nuclear hormone receptor binding // inferred from direct assay /// 0046966 // thyroid hormone receptor binding // non-traceable author statement /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // non-traceable author statement </td> <td> 51.55 </td> <td> 83.65 </td> <td> 3.31 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218014_at </td> <td> 218014_at </td> <td> NM_024844 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024844.1 /DEF=Homo sapiens hypothetical protein FLJ12549 (FLJ12549), mRNA. /FEA=mRNA /GEN=FLJ12549 /PROD=hypothetical protein FLJ12549 /DB_XREF=gi:13376258 /UG=Hs.184352 hypothetical protein FLJ12549 /FL=gb:BC000697.1 gb:NM_024844.1 </td> <td> NM_024844 </td> <td> nucleoporin 85kDa </td> <td> NUP85 </td> <td> 79902 </td> <td> NM_024844 /// XM_005257690 /// XM_005257692 /// XM_005257693 /// XM_006722094 /// XR_243683 /// XR_429921 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048246 // macrophage chemotaxis // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031080 // nuclear pore outer ring // non-traceable author statement /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 38.00 </td> <td> 118.78 </td> <td> 3.31 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201943_s_at </td> <td> 201943_s_at </td> <td> NM_001304 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001304.2 /DEF=Homo sapiens carboxypeptidase D (CPD), mRNA. /FEA=mRNA /GEN=CPD /PROD=carboxypeptidase D precursor /DB_XREF=gi:8051580 /UG=Hs.5057 carboxypeptidase D /FL=gb:U65090.1 gb:D85390.1 gb:NM_001304.2 </td> <td> NM_001304 </td> <td> carboxypeptidase D </td> <td> CPD </td> <td> 1362 </td> <td> NM_001199775 /// NM_001304 </td> <td> 0006508 // proteolysis // inferred from electronic annotation </td> <td> 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0004185 // serine-type carboxypeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -76.85 </td> <td> 157.65 </td> <td> -3.30 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200022_at </td> <td> 200022_at </td> <td> NM_000979 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000979.1 /DEF=Homo sapiens ribosomal protein L18 (RPL18), mRNA. /FEA=mRNA /GEN=RPL18 /PROD=ribosomal protein L18 /DB_XREF=gi:4506606 /UG=Hs.75458 ribosomal protein L18 /FL=gb:BC000374.1 gb:L11566.1 gb:NM_000979.1 </td> <td> NM_000979 </td> <td> ribosomal protein L18 </td> <td> RPL18 </td> <td> 6141 </td> <td> NM_000979 /// NM_001270490 /// NR_073022 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement </td> <td> -545.32 </td> <td> 2690.84 </td> <td> -3.30 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208743_s_at </td> <td> 208743_s_at </td> <td> BC001359 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001359.1 /DEF=Homo sapiens, tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, beta polypeptide, clone MGC:1580, mRNA, complete cds.  /FEA=mRNA /PROD=tyrosine 3-monooxygenasetryptophan5-monooxygenase activation protein, beta polypeptide /DB_XREF=gi:12655022 /UG=Hs.279920 tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, beta polypeptide /FL=gb:BC001359.1 </td> <td> BC001359 </td> <td> tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta </td> <td> YWHAB </td> <td> 7529 </td> <td> NM_003404 /// NM_139323 </td> <td> 0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0006605 // protein targeting // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0035308 // negative regulation of protein dephosphorylation // inferred from direct assay /// 0035329 // hippo signaling // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051220 // cytoplasmic sequestering of protein // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0050815 // phosphoserine binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from physical interaction </td> <td> 156.95 </td> <td> 433.12 </td> <td> 3.30 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 204683_at </td> <td> 204683_at </td> <td> NM_000873 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000873.2 /DEF=Homo sapiens intercellular adhesion molecule 2 (ICAM2), mRNA. /FEA=mRNA /GEN=ICAM2 /PROD=intercellular adhesion molecule 2 precursor /DB_XREF=gi:12545398 /UG=Hs.83733 intercellular adhesion molecule 2 /FL=gb:NM_000873.2 gb:BC003097.1 </td> <td> NM_000873 </td> <td> intercellular adhesion molecule 2 </td> <td> ICAM2 </td> <td> 3384 </td> <td> NM_000873 /// NM_001099786 /// NM_001099787 /// NM_001099788 /// NM_001099789 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0050776 // regulation of immune response // traceable author statement </td> <td> 0001931 // uropod // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071944 // cell periphery // inferred from electronic annotation </td> <td> 0005178 // integrin binding // inferred from physical interaction </td> <td> 216.67 </td> <td> 1128.41 </td> <td> 3.30 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201334_s_at </td> <td> 201334_s_at </td> <td> AB002380 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB002380.1 /DEF=Human mRNA for KIAA0382 gene, partial cds. /FEA=mRNA /GEN=KIAA0382 /DB_XREF=gi:2224704 /UG=Hs.6582 Rho guanine exchange factor (GEF) 12 /FL=gb:AF180681.1 gb:NM_015313.1 </td> <td> AB002380 </td> <td> Rho guanine nucleotide exchange factor (GEF) 12 </td> <td> ARHGEF12 </td> <td> 23365 </td> <td> NM_001198665 /// NM_015313 /// XM_005271478 /// XM_005271480 /// XM_006718805 </td> <td> 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001664 // G-protein coupled receptor binding // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> 95.05 </td> <td> 355.28 </td> <td> 3.30 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 221510_s_at </td> <td> 221510_s_at </td> <td> AF158555 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF158555.1 /DEF=Homo sapiens glutaminase C mRNA, complete cds. /FEA=mRNA /PROD=glutaminase C /DB_XREF=gi:5690371 /UG=Hs.239189 glutaminase /FL=gb:AF158555.1 gb:AF097492.1 </td> <td> AF158555 </td> <td> glutaminase </td> <td> GLS </td> <td> 2744 </td> <td> NM_001256310 /// NM_014905 /// XM_005246467 /// XM_006712435 /// XM_006712436 /// XR_241306 </td> <td> 0001967 // suckling behavior // inferred from electronic annotation /// 0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0006537 // glutamate biosynthetic process // inferred from direct assay /// 0006537 // glutamate biosynthetic process // traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0006543 // glutamine catabolic process // inferred from direct assay /// 0006543 // glutamine catabolic process // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0014047 // glutamate secretion // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation </td> <td> 0004359 // glutaminase activity // inferred from direct assay /// 0004359 // glutaminase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 84.53 </td> <td> 148.26 </td> <td> 3.29 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201309_x_at </td> <td> 201309_x_at </td> <td> U36189 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U36189.1 /DEF=Human p311 protein (hP311) mRNA, complete cds. /FEA=mRNA /GEN=hP311 /PROD=p311 protein /DB_XREF=gi:1244509 /UG=Hs.142827 P311 protein /FL=gb:U36189.1 gb:NM_004772.1 gb:U30521.1 </td> <td> U36189 </td> <td> neuronal regeneration related protein </td> <td> NREP </td> <td> 9315 </td> <td> NM_001142474 /// NM_001142475 /// NM_001142476 /// NM_001142477 /// NM_001142478 /// NM_001142479 /// NM_001142480 /// NM_001142481 /// NM_001142482 /// NM_001142483 /// NM_004772 /// XM_006714732 /// XM_006714733 </td> <td> 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 34.55 </td> <td> 91.33 </td> <td> 3.29 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202591_s_at </td> <td> 202591_s_at </td> <td> NM_003143 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003143.1 /DEF=Homo sapiens single-stranded DNA-binding protein (SSBP), mRNA. /FEA=mRNA /GEN=SSBP /PROD=single-stranded DNA-binding protein /DB_XREF=gi:4507230 /UG=Hs.923 single-stranded DNA-binding protein /FL=gb:M94556.1 gb:NM_003143.1 </td> <td> NM_003143 </td> <td> single-stranded DNA binding protein 1, mitochondrial </td> <td> SSBP1 </td> <td> 6742 </td> <td> NM_001256510 /// NM_001256511 /// NM_001256512 /// NM_001256513 /// NM_003143 /// NR_046269 /// XM_005250048 /// XM_005250049 /// XM_005250050 /// XM_005250051 </td> <td> 0006260 // DNA replication // inferred from electronic annotation /// 0051096 // positive regulation of helicase activity // inferred from direct assay /// 0070584 // mitochondrion morphogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 120.50 </td> <td> 554.08 </td> <td> 3.29 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 41577_at </td> <td> 41577_at </td> <td> AB020630 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AB020630:Homo sapiens mRNA for KIAA0823 protein, partial cds /cds=(0,1239) /gb=AB020630 /gi=4240131 /ug=Hs.45719 /len=5597 </td> <td> AB020630 </td> <td> protein phosphatase 1, regulatory subunit 16B </td> <td> PPP1R16B </td> <td> 26051 </td> <td> NM_001172735 /// NM_015568 </td> <td> 0007165 // signal transduction // non-traceable author statement /// 0051489 // regulation of filopodium assembly // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // non-traceable author statement </td> <td> -44.17 </td> <td> 101.54 </td> <td> -3.29 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202804_at </td> <td> 202804_at </td> <td> AI539710 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI539710 /FEA=EST /DB_XREF=gi:4453845 /DB_XREF=est:tp77b05.x1 /CLONE=IMAGE:2205297 /UG=Hs.89433 ATP-binding cassette, sub-family C (CFTRMRP), member 1 /FL=gb:L05628.1 gb:NM_004996.2 </td> <td> AI539710 </td> <td> ATP-binding cassette, sub-family C (CFTR/MRP), member 1 </td> <td> ABCC1 </td> <td> 4363 </td> <td> NM_004996 /// NM_019862 /// NM_019898 /// NM_019899 /// NM_019900 /// NM_019901 /// NM_019902 /// XM_005255327 /// XM_005255328 /// XM_005255329 /// XM_006720884 /// XM_006720885 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006691 // leukotriene metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009235 // cobalamin metabolic process // traceable author statement /// 0019369 // arachidonic acid metabolic process // traceable author statement /// 0042493 // response to drug // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation </td> <td> -66.07 </td> <td> 366.19 </td> <td> -3.29 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201253_s_at </td> <td> 201253_s_at </td> <td> NM_006319 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006319.1 /DEF=Homo sapiens CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) (CDIPT), mRNA.  /FEA=mRNA /GEN=CDIPT /PROD=CDP-diacylglycerol--inositol3-phosphatidyltransferase (phosphatidylinositol synthase) /DB_XREF=gi:5453905 /UG=Hs.227107 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) /FL=gb:BC001444.1 gb:AF014807.1 gb:NM_006319.1 </td> <td> NM_006319 </td> <td> CDP-diacylglycerol--inositol 3-phosphatidyltransferase </td> <td> CDIPT </td> <td> 10423 </td> <td> NM_001286585 /// NM_001286586 /// NM_006319 /// NM_145752 /// XM_005255038 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // inferred from direct assay /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046341 // CDP-diacylglycerol metabolic process // inferred from electronic annotation /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay </td> <td> 0003881 // CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity // inferred from direct assay /// 0003881 // CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016780 // phosphotransferase activity, for other substituted phosphate groups // inferred from electronic annotation /// 0019992 // diacylglycerol binding // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0043178 // alcohol binding // inferred from electronic annotation </td> <td> 59.98 </td> <td> 258.76 </td> <td> 3.29 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209566_at </td> <td> 209566_at </td> <td> AL080184 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL080184.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434O071 (from clone DKFZp434O071). /FEA=mRNA /DB_XREF=gi:5262661 /UG=Hs.7089 insulin induced protein 2 /FL=gb:AF125392.1 </td> <td> AL080184 </td> <td> insulin induced gene 2 </td> <td> INSIG2 </td> <td> 51141 </td> <td> NM_016133 /// XM_005263690 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006991 // response to sterol depletion // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0010894 // negative regulation of steroid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0032933 // SREBP signaling pathway // inferred from direct assay /// 0033993 // response to lipid // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045717 // negative regulation of fatty acid biosynthetic process // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060363 // cranial suture morphogenesis // inferred from electronic annotation /// 0070542 // response to fatty acid // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032937 // SREBP-SCAP-Insig complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation </td> <td> 31.25 </td> <td> 133.28 </td> <td> 3.29 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 210201_x_at </td> <td> 210201_x_at </td> <td> AF001383 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF001383.1 /DEF=Homo sapiens amphiphysin II mRNA, complete cds. /FEA=mRNA /PROD=amphiphysin II /DB_XREF=gi:2199534 /UG=Hs.193163 bridging integrator 1 /FL=gb:AF001383.1 gb:AF068917.1 </td> <td> AF001383 </td> <td> bridging integrator 1 </td> <td> BIN1 </td> <td> 274 </td> <td> NM_004305 /// NM_139343 /// NM_139344 /// NM_139345 /// NM_139346 /// NM_139347 /// NM_139348 /// NM_139349 /// NM_139350 /// NM_139351 /// XM_005263642 /// XM_005263643 /// XM_005263644 /// XM_005263645 /// XM_005263646 /// XM_005263647 /// XM_005263648 /// XM_006712424 /// XM_006712425 /// XM_006712426 /// XM_006712427 /// XM_006712428 /// XM_006712429 /// XM_006712430 /// XM_006712431 /// XM_006712432 /// XM_006712433 /// XM_006712434 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from mutant phenotype /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from mutant phenotype /// 0060988 // lipid tube assembly // inferred from mutant phenotype /// 0071156 // regulation of cell cycle arrest // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030315 // T-tubule // inferred from sequence or structural similarity /// 0030424 // axon // inferred from direct assay /// 0031674 // I band // inferred from sequence or structural similarity /// 0033268 // node of Ranvier // inferred from sequence or structural similarity /// 0043194 // axon initial segment // inferred from sequence or structural similarity /// 0043196 // varicosity // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0044300 // cerebellar mossy fiber // inferred from electronic annotation /// 0060987 // lipid tube // inferred from mutant phenotype </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from physical interaction /// 0051020 // GTPase binding // inferred from electronic annotation </td> <td> -80.60 </td> <td> 160.22 </td> <td> -3.29 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 215631_s_at </td> <td> 215631_s_at </td> <td> AL050008 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL050008.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564A063 (from clone DKFZp564A063); partial cds.  /FEA=mRNA /GEN=DKFZp564A063 /PROD=hypothetical protein /DB_XREF=gi:4884078 /UG=Hs.306186 DKFZP564A063 protein </td> <td> AL050008 </td> <td> breast cancer metastasis suppressor 1 </td> <td> BRMS1 </td> <td> 25855 </td> <td> NM_001024957 /// NM_001024958 /// NM_015399 /// XM_005273883 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0090312 // positive regulation of protein deacetylation // inferred from direct assay /// 2000210 // positive regulation of anoikis // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from direct assay </td> <td> 52.18 </td> <td> 139.26 </td> <td> 3.29 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 217832_at </td> <td> 217832_at </td> <td> BE672181 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE672181 /FEA=EST /DB_XREF=gi:10032712 /DB_XREF=est:7b51c08.x1 /CLONE=IMAGE:3231758 /UG=Hs.155489 NS1-associated protein 1 /FL=gb:AF155568.1 gb:NM_006372.1 </td> <td> BE672181 </td> <td> synaptotagmin binding, cytoplasmic RNA interacting protein </td> <td> SYNCRIP </td> <td> 10492 </td> <td> NM_001159673 /// NM_001159674 /// NM_001159675 /// NM_001159676 /// NM_001159677 /// NM_001253771 /// NM_006372 /// XM_005248635 /// XM_005248636 /// XM_005248637 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype /// 0071346 // cellular response to interferon-gamma // inferred from direct assay </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from sequence or structural similarity /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 100.88 </td> <td> 358.06 </td> <td> 3.29 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212826_s_at </td> <td> 212826_s_at </td> <td> AI961224 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI961224 /FEA=EST /DB_XREF=gi:5753937 /DB_XREF=est:wt15b11.x1 /CLONE=IMAGE:2507517 /UG=Hs.164280 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 </td> <td> AI961224 </td> <td> solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 </td> <td> SLC25A6 </td> <td> 293 </td> <td> NM_001636 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0015866 // ADP transport // non-traceable author statement /// 0015867 // ATP transport // non-traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046732 // active induction of host immune response by virus // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005744 // mitochondrial inner membrane presequence translocase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005471 // ATP:ADP antiporter activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -417.37 </td> <td> 1884.21 </td> <td> -3.29 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209000_s_at </td> <td> 209000_s_at </td> <td> BC001329 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001329.1 /DEF=Homo sapiens, Similar to hypothetical protein FLJ10849, clone MGC:5557, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to hypothetical protein FLJ10849 /DB_XREF=gi:12654962 /UG=Hs.80712 KIAA0202 protein /FL=gb:BC001329.1 </td> <td> BC001329 </td> <td> septin 8 </td> <td> SEPT8 </td> <td> 23176 </td> <td> NM_001098811 /// NM_001098812 /// NM_001098813 /// NM_015146 /// XM_005271927 /// XM_005271928 /// XM_005271929 /// XM_005271930 /// XM_005271931 </td> <td> 0007049 // cell cycle // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 37.80 </td> <td> 34.85 </td> <td> 3.29 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212565_at </td> <td> 212565_at </td> <td> BE302191 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE302191 /FEA=EST /DB_XREF=gi:9185939 /DB_XREF=est:bb82f05.x1 /CLONE=IMAGE:3048897 /UG=Hs.184523 KIAA0965 protein </td> <td> BE302191 </td> <td> serine/threonine kinase 38 like </td> <td> STK38L </td> <td> 23012 </td> <td> NM_015000 /// XM_005253342 /// XM_005253343 /// XM_006719058 /// XM_006719059 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0051128 // regulation of cellular component organization // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 31.12 </td> <td> 38.69 </td> <td> 3.28 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 37462_i_at </td> <td> 37462_i_at </td> <td> L21990 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. L21990:Human spliceosomal protein (SAP 62) gene, complete cds /cds=(0,1394) /gb=L21990 /gi=409218 /ug=Hs.115232 /len=1395 </td> <td> L21990 </td> <td> splicing factor 3a, subunit 2, 66kDa </td> <td> SF3A2 </td> <td> 8175 </td> <td> NM_007165 </td> <td> 0000389 // mRNA 3'-splice site recognition // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from mutant phenotype /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 46.58 </td> <td> 129.26 </td> <td> 3.28 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218764_at </td> <td> 218764_at </td> <td> NM_024064 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024064.1 /DEF=Homo sapiens hypothetical protein MGC5363 (MGC5363), mRNA. /FEA=mRNA /GEN=MGC5363 /PROD=hypothetical protein MGC5363 /DB_XREF=gi:13129041 /UG=Hs.1880 hypothetical protein MGC5363 /FL=gb:BC001000.2 gb:NM_024064.1 </td> <td> NM_024064 </td> <td> protein kinase C, eta </td> <td> PRKCH </td> <td> 5583 </td> <td> NM_006255 </td> <td> 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0034351 // negative regulation of glial cell apoptotic process // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0045618 // positive regulation of keratinocyte differentiation // inferred from sequence or structural similarity /// 0050861 // positive regulation of B cell receptor signaling pathway // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0060252 // positive regulation of glial cell proliferation // inferred from mutant phenotype /// 0070528 // protein kinase C signaling // inferred from electronic annotation /// 2000810 // regulation of tight junction assembly // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // traceable author statement /// 0004699 // calcium-independent protein kinase C activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017160 // Ral GTPase binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 67.73 </td> <td> 360.79 </td> <td> 3.28 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200071_at </td> <td> 200071_at </td> <td> BF224259 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF224259 /FEA=EST /DB_XREF=gi:11131523 /DB_XREF=est:7q85c09.x1 /CLONE=IMAGE:3705208 /UG=Hs.79968 splicing factor 30, survival of motor neuron-related /FL=gb:AF083385.1 gb:AF107463.1 gb:NM_005871.1 </td> <td> BF224259 </td> <td> survival motor neuron domain containing 1 </td> <td> SMNDC1 </td> <td> 10285 </td> <td> NM_005871 /// XM_005269382 </td> <td> 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 61.90 </td> <td> 208.53 </td> <td> 3.28 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202471_s_at </td> <td> 202471_s_at </td> <td> NM_004135 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004135.1 /DEF=Homo sapiens isocitrate dehydrogenase 3 (NAD+) gamma (IDH3G), mRNA. /FEA=mRNA /GEN=IDH3G /PROD=isocitrate dehydrogenase 3 (NAD+) gamma /DB_XREF=gi:4758581 /UG=Hs.75253 isocitrate dehydrogenase 3 (NAD+) gamma /FL=gb:BC001902.1 gb:BC000933.2 gb:U40272.1 gb:NM_004135.1 </td> <td> NM_004135 </td> <td> isocitrate dehydrogenase 3 (NAD+) gamma </td> <td> IDH3G </td> <td> 3421 </td> <td> NM_004135 /// NM_174869 </td> <td> 0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006102 // isocitrate metabolic process // inferred from sequence or structural similarity /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004449 // isocitrate dehydrogenase (NAD+) activity // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 54.93 </td> <td> 115.04 </td> <td> 3.28 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 211931_s_at </td> <td> 211931_s_at </td> <td> BG505670 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG505670 /FEA=EST /DB_XREF=gi:13467187 /DB_XREF=est:602549833F1 /CLONE=IMAGE:4657424 /UG=Hs.249247 heterogeneous nuclear protein similar to rat helix destabilizing protein </td> <td> BG505670 </td> <td> heterogeneous nuclear ribonucleoprotein A3 /// heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 </td> <td> HNRNPA3 /// HNRNPA3P1 </td> <td> 10151 /// 220988 </td> <td> NM_194247 /// NR_002726 /// XM_005246380 /// XM_005246381 /// XM_005246382 /// XM_006712365 /// XR_427076 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 124.30 </td> <td> 531.10 </td> <td> 3.27 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201665_x_at </td> <td> 201665_x_at </td> <td> NM_001021 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001021.1 /DEF=Homo sapiens ribosomal protein S17 (RPS17), mRNA. /FEA=mRNA /GEN=RPS17 /PROD=ribosomal protein S17 /DB_XREF=gi:4506692 /UG=Hs.5174 ribosomal protein S17 /FL=gb:M13932.1 gb:NM_001021.1 </td> <td> NM_001021 </td> <td> ribosomal protein S17 </td> <td> RPS17 </td> <td> 6218 </td> <td> NM_001021 /// NM_001199057 /// NR_111943 /// NR_111944 </td> <td> 0000028 // ribosomal small subunit assembly // not recorded /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // non-traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // not recorded /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0034101 // erythrocyte homeostasis // inferred from mutant phenotype /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // not recorded /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1067.47 </td> <td> 3551.06 </td> <td> -3.27 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209332_s_at </td> <td> 209332_s_at </td> <td> BC003525 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003525.1 /DEF=Homo sapiens, Similar to Max, clone MGC:10775, mRNA, complete cds. /FEA=mRNA /PROD=Similar to Max /DB_XREF=gi:13097617 /UG=Hs.42712 MAX protein /FL=gb:BC003525.1 </td> <td> BC003525 </td> <td> MYC associated factor X </td> <td> MAX </td> <td> 4149 </td> <td> NM_001271068 /// NM_001271069 /// NM_002382 /// NM_145112 /// NM_145113 /// NM_145114 /// NM_145116 /// NM_197957 /// NR_073137 /// NR_073138 /// XR_429315 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -83.23 </td> <td> 487.11 </td> <td> -3.27 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209003_at </td> <td> 209003_at </td> <td> AF070548 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF070548.1 /DEF=Homo sapiens clone 24408 2-oxoglutarate carrier protein mRNA, complete cds.  /FEA=mRNA /PROD=2-oxoglutarate carrier protein /DB_XREF=gi:3387910 /UG=Hs.184877 solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 /FL=gb:AF070548.1 </td> <td> AF070548 </td> <td> solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 </td> <td> SLC25A11 </td> <td> 8402 </td> <td> NM_001165417 /// NM_001165418 /// NM_003562 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006810 // transport // traceable author statement /// 0015742 // alpha-ketoglutarate transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0015367 // oxoglutarate:malate antiporter activity // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 32.12 </td> <td> 179.11 </td> <td> 3.27 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 206222_at </td> <td> 206222_at </td> <td> NM_003841 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003841.1 /DEF=Homo sapiens tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain (TNFRSF10C), mRNA.  /FEA=mRNA /GEN=TNFRSF10C /PROD=tumor necrosis factor receptor superfamily,member 10c, decoy without an intracellular domain /DB_XREF=gi:10835042 /UG=Hs.119684 tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain /FL=gb:NM_003841.1 gb:AF012629.1 gb:AF020502.1 gb:AF016267.1 gb:AF033854.1 gb:AF014794.1 </td> <td> NM_003841 </td> <td> tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain </td> <td> TNFRSF10C </td> <td> 8794 </td> <td> NM_003841 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored component of membrane // inferred from electronic annotation </td> <td> 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0045569 // TRAIL binding // inferred from electronic annotation </td> <td> 51.55 </td> <td> 81.58 </td> <td> 3.27 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201218_at </td> <td> 201218_at </td> <td> N23018 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N23018 /FEA=EST /DB_XREF=gi:1137168 /DB_XREF=est:yx65d12.s1 /CLONE=IMAGE:266615 /UG=Hs.171391 C-terminal binding protein 2 /FL=gb:AF016507.1 gb:NM_001329.1 </td> <td> N23018 </td> <td> C-terminal binding protein 2 </td> <td> CTBP2 </td> <td> 1488 </td> <td> NM_001083914 /// NM_001290214 /// NM_001290215 /// NM_001329 /// NM_022802 /// XM_005269561 /// XM_005269562 /// XM_005269563 /// XM_005269564 /// XM_005269565 /// XM_005269567 /// XM_005269568 /// XM_005269569 /// XM_005269570 /// XM_005269571 /// XM_005269572 /// XM_006717641 /// XM_006717642 /// XM_006717643 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 90.22 </td> <td> 354.61 </td> <td> 3.27 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 200745_s_at </td> <td> 200745_s_at </td> <td> AF070603 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF070603.1 /DEF=Homo sapiens clone 24584 beta-subunit signal transducing proteins GSGI mRNA, partial cds.  /FEA=mRNA /PROD=beta-subunit signal transducing proteins GSGI /DB_XREF=gi:3387983 /UG=Hs.215595 guanine nucleotide binding protein (G protein), beta polypeptide 1 /FL=gb:NM_002074.1 gb:BC004186.1 </td> <td> AF070603 </td> <td> guanine nucleotide binding protein (G protein), beta polypeptide 1 </td> <td> GNB1 </td> <td> 2782 </td> <td> NM_001282538 /// NM_001282539 /// NM_002074 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050909 // sensory perception of taste // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity </td> <td> 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005834 // heterotrimeric G-protein complex // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0042622 // photoreceptor outer segment membrane // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097381 // photoreceptor disc membrane // traceable author statement </td> <td> 0003924 // GTPase activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from direct assay /// 0051020 // GTPase binding // inferred from physical interaction </td> <td> -119.57 </td> <td> 904.74 </td> <td> -3.27 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 205548_s_at </td> <td> 205548_s_at </td> <td> NM_006806 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006806.1 /DEF=Homo sapiens BTG family, member 3 (BTG3), mRNA. /FEA=mRNA /GEN=BTG3 /PROD=BTG family, member 3 /DB_XREF=gi:5802989 /UG=Hs.77311 BTG family, member 3 /FL=gb:D64110.1 gb:NM_006806.1 </td> <td> NM_006806 </td> <td> BTG family, member 3 </td> <td> BTG3 </td> <td> 10950 </td> <td> NM_001130914 /// NM_006806 /// XM_006723963 </td> <td> 0008285 // negative regulation of cell proliferation // traceable author statement /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -36.70 </td> <td> 243.95 </td> <td> -3.27 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212520_s_at </td> <td> 212520_s_at </td> <td> AI684141 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI684141 /FEA=EST /DB_XREF=gi:4895435 /DB_XREF=est:tx79f11.x1 /CLONE=IMAGE:2275821 /UG=Hs.78202 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 </td> <td> AI684141 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 </td> <td> SMARCA4 </td> <td> 6597 </td> <td> NM_001128844 /// NM_001128845 /// NM_001128846 /// NM_001128847 /// NM_001128848 /// NM_001128849 /// NM_003072 /// XM_005260028 /// XM_005260030 /// XM_005260031 /// XM_005260032 /// XM_005260033 /// XM_005260034 /// XM_005260035 /// XM_006722845 /// XM_006722846 /// XM_006722847 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001832 // blastocyst growth // inferred from electronic annotation /// 0001835 // blastocyst hatching // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003407 // neural retina development // inferred from expression pattern /// 0006200 // ATP catabolic process // inferred from genetic interaction /// 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred by curator /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0007070 // negative regulation of transcription from RNA polymerase II promoter during mitosis // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007403 // glial cell fate determination // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010424 // DNA methylation on cytosine within a CG sequence // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030900 // forebrain development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035887 // aortic smooth muscle cell differentiation // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0043923 // positive regulation by host of viral transcription // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048562 // embryonic organ morphogenesis // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0060318 // definitive erythrocyte differentiation // inferred from electronic annotation /// 0060347 // heart trabecula formation // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005719 // nuclear euchromatin // inferred from electronic annotation /// 0005726 // perichromatin fibrils // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from sequence or structural similarity /// 0071778 // WINAC complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // inferred from genetic interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042393 // histone binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction /// 0070577 // lysine-acetylated histone binding // inferred from direct assay </td> <td> 34.37 </td> <td> 112.76 </td> <td> 3.27 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 208118_x_at </td> <td> 208118_x_at </td> <td> NM_031211 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031211.1 /DEF=Homo sapiens LAT1-3TM protein (LAT1-3TM), mRNA. /FEA=mRNA /GEN=LAT1-3TM /PROD=LAT1-3TM protein /DB_XREF=gi:13654279 /FL=gb:NM_031211.1 </td> <td> NM_031211 </td> <td> putative L-type amino acid transporter 1-like protein IMAA-like /// solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1 /// solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2 /// SMG1 pseudogene 3 </td> <td> LOC101060604 /// SLC7A5P1 /// SLC7A5P2 /// SMG1P3 </td> <td> 81893 /// 387254 /// 100271836 /// 101060604 </td> <td> NM_031211 /// NR_002593 /// NR_002594 /// NR_027155 /// XM_005276494 /// XM_006726608 /// XM_006726609 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation </td> <td> -47.13 </td> <td> 125.21 </td> <td> -3.27 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 212798_s_at </td> <td> 212798_s_at </td> <td> AK001389 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001389.1 /DEF=Homo sapiens cDNA FLJ10527 fis, clone NT2RP2000932, highly similar to Homo sapiens mRNA; cDNA DKFZp564O043.  /FEA=mRNA /DB_XREF=gi:7022618 /UG=Hs.15144 hypothetical protein DKFZp564O043 </td> <td> AK001389 </td> <td> ankyrin repeat and MYND domain containing 2 </td> <td> ANKMY2 </td> <td> 57037 </td> <td> NM_020319 </td> <td>  </td> <td> 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 36.10 </td> <td> 107.75 </td> <td> 3.27 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 218501_at </td> <td> 218501_at </td> <td> NM_019555 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019555.1 /DEF=Homo sapiens Rho guanine nucleotide exchange factor (GEF) 3 (ARHGEF3), mRNA.  /FEA=mRNA /GEN=ARHGEF3 /PROD=Rho guanine nucleotide exchange factor (GEF) 3 /DB_XREF=gi:9506400 /UG=Hs.25951 Rho guanine nucleotide exchange factor (GEF) 3 /FL=gb:AF249744.1 gb:NM_019555.1 </td> <td> NM_019555 </td> <td> Rho guanine nucleotide exchange factor (GEF) 3 </td> <td> ARHGEF3 </td> <td> 50650 </td> <td> NM_001128615 /// NM_001128616 /// NM_001289698 /// NM_019555 /// XM_005265186 /// XM_005265187 /// XM_005265188 /// XM_005265189 </td> <td> 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> -53.75 </td> <td> 189.78 </td> <td> -3.26 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 209046_s_at </td> <td> 209046_s_at </td> <td> AB030710 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB030710.1 /DEF=Homo sapiens FLC3A mRNA for MAP1 light chain 3 related protein, complete cds.  /FEA=mRNA /GEN=FLC3A /PROD=MAP1 light chain 3 related protein /DB_XREF=gi:12641848 /UG=Hs.6518 ganglioside expression factor 2 /FL=gb:AB030710.1 gb:AF087848.1 gb:AF077046.1 gb:NM_007285.1 </td> <td> AB030710 </td> <td> GABA(A) receptor-associated protein-like 2 </td> <td> GABARAPL2 </td> <td> 11345 </td> <td> NM_007285 </td> <td> 0000045 // autophagic vacuole assembly // not recorded /// 0000422 // mitochondrion degradation // not recorded /// 0006810 // transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0006914 // autophagy // non-traceable author statement /// 0006995 // cellular response to nitrogen starvation // not recorded /// 0015031 // protein transport // inferred from electronic annotation /// 0032258 // CVT pathway // not recorded /// 0032781 // positive regulation of ATPase activity // inferred from sequence or structural similarity /// 0034727 // piecemeal microautophagy of nucleus // not recorded /// 0044805 // late nucleophagy // not recorded /// 0071211 // protein targeting to vacuole involved in autophagy // not recorded /// 1901799 // negative regulation of proteasomal protein catabolic process // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from direct assay /// 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0000407 // pre-autophagosomal structure // not recorded /// 0000421 // autophagic vacuole membrane // inferred from direct assay /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0000149 // SNARE binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // non-traceable author statement /// 0008429 // phosphatidylethanolamine binding // not recorded /// 0048487 // beta-tubulin binding // inferred from sequence or structural similarity /// 0050811 // GABA receptor binding // inferred from sequence or structural similarity /// 0050811 // GABA receptor binding // non-traceable author statement /// 0051117 // ATPase binding // inferred from sequence or structural similarity </td> <td> 121.33 </td> <td> 516.24 </td> <td> 3.26 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 217789_at </td> <td> 217789_at </td> <td> NM_021249 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021249.1 /DEF=Homo sapiens sorting nexin 6 (SNX6), mRNA. /FEA=mRNA /GEN=SNX6 /PROD=sorting nexin 6 /DB_XREF=gi:13027619 /UG=Hs.284291 sorting nexin 6 /FL=gb:BC001798.1 gb:NM_021249.1 gb:AF121856.1 </td> <td> NM_021249 </td> <td> sorting nexin 6 </td> <td> SNX6 </td> <td> 58533 </td> <td> NM_021249 /// NM_152233 /// XM_006720224 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006886 // intracellular protein transport // non-traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007175 // negative regulation of epidermal growth factor-activated receptor activity // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // not recorded /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> -69.80 </td> <td> 261.18 </td> <td> -3.26 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 201669_s_at </td> <td> 201669_s_at </td> <td> NM_002356 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002356.4 /DEF=Homo sapiens myristoylated alanine-rich protein kinase C substrate (MARCKS, 80K-L) (MACS), mRNA.  /FEA=mRNA /GEN=MACS /PROD=myristoylated alanine-rich protein kinase Csubstrate /DB_XREF=gi:11125771 /UG=Hs.75607 myristoylated alanine-rich protein kinase C substrate (MARCKS, 80K-L) /FL=gb:NM_002356.4 gb:M68956.1 gb:D10522.1 </td> <td> NM_002356 </td> <td> myristoylated alanine-rich protein kinase C substrate </td> <td> MARCKS </td> <td> 4082 </td> <td> NM_002356 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0042585 // germinal vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0051015 // actin filament binding // traceable author statement </td> <td> -215.35 </td> <td> 1319.58 </td> <td> -3.26 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202656_s_at </td> <td> 202656_s_at </td> <td> BG107456 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG107456 /FEA=EST /DB_XREF=gi:12601302 /DB_XREF=est:602277568F1 /CLONE=IMAGE:4365352 /UG=Hs.77293 KIAA0127 gene product /FL=gb:D50917.1 gb:NM_014755.1 </td> <td> BG107456 </td> <td> SERTA domain containing 2 </td> <td> SERTAD2 </td> <td> 9792 </td> <td> NM_014755 /// XM_005264669 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -51.52 </td> <td> 107.96 </td> <td> -3.26 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 211972_x_at </td> <td> 211972_x_at </td> <td> AI953822 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI953822 /FEA=EST /DB_XREF=gi:5746132 /DB_XREF=est:wx69h05.x1 /CLONE=IMAGE:2548953 /UG=Hs.73742 ribosomal protein, large, P0 </td> <td> AI953822 </td> <td> ribosomal protein, large, P0 </td> <td> RPLP0 </td> <td> 6175 </td> <td> NM_001002 /// NM_053275 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -723.45 </td> <td> 3505.43 </td> <td> -3.26 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 202076_at </td> <td> 202076_at </td> <td> NM_001166 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001166.2 /DEF=Homo sapiens baculoviral IAP repeat-containing 2 (BIRC2), mRNA. /FEA=mRNA /GEN=BIRC2 /PROD=baculoviral IAP repeat-containing protein 2 /DB_XREF=gi:10880127 /UG=Hs.289107 baculoviral IAP repeat-containing 2 /FL=gb:NM_001166.2 gb:U37547.1 gb:L49431.1 gb:U45879.1 </td> <td> NM_001166 </td> <td> baculoviral IAP repeat containing 2 </td> <td> BIRC2 </td> <td> 329 </td> <td> NM_001166 /// NM_001256163 /// NM_001256166 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0034121 // regulation of toll-like receptor signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038061 // NIK/NF-kappaB signaling // traceable author statement /// 0039535 // regulation of RIG-I signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045088 // regulation of innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // traceable author statement /// 0050727 // regulation of inflammatory response // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from direct assay /// 0060544 // regulation of necroptotic process // inferred from mutant phenotype /// 0070266 // necroptotic process // inferred from electronic annotation /// 0070424 // regulation of nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 1902523 // positive regulation of protein K63-linked ubiquitination // inferred from direct assay /// 1902524 // positive regulation of protein K48-linked ubiquitination // inferred from direct assay /// 1902527 // positive regulation of protein monoubiquitination // inferred from direct assay /// 2000116 // regulation of cysteine-type endopeptidase activity // traceable author statement </td> <td> 0001741 // XY body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009898 // cytoplasmic side of plasma membrane // inferred from sequence or structural similarity /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation </td> <td> 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -129.55 </td> <td> 639.75 </td> <td> -3.26 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.49 </td> </tr>
  <tr> <td> 210946_at </td> <td> 210946_at </td> <td> AF014403 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF014403.1 /DEF=Homo sapiens type-2 phosphatidic acid phosphatase alpha-2 (PAP2-a2) mRNA, complete cds.  /FEA=mRNA /GEN=PAP2-a2 /PROD=type-2 phosphatidic acid phosphatase alpha-2 /DB_XREF=gi:3123849 /UG=Hs.41569 phosphatidic acid phosphatase type 2A /FL=gb:AF014403.1 </td> <td> AF014403 </td> <td> phosphatidic acid phosphatase type 2A </td> <td> PPAP2A </td> <td> 8611 </td> <td> NM_003711 /// NM_176895 /// NR_103485 /// XM_006714724 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0008354 // germ cell migration // traceable author statement /// 0019216 // regulation of lipid metabolic process // non-traceable author statement /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030518 // intracellular steroid hormone receptor signaling pathway // traceable author statement /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046839 // phospholipid dephosphorylation // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0008195 // phosphatidate phosphatase activity // inferred from direct assay /// 0008195 // phosphatidate phosphatase activity // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -33.50 </td> <td> 77.85 </td> <td> -3.26 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218581_at </td> <td> 218581_at </td> <td> NM_022060 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022060.1 /DEF=Homo sapiens hypothetical protein FLJ12816 (FLJ12816), mRNA. /FEA=mRNA /GEN=FLJ12816 /PROD=hypothetical protein FLJ12816 /DB_XREF=gi:11545766 /UG=Hs.9175 hypothetical protein FLJ12816 /FL=gb:NM_022060.1 </td> <td> NM_022060 </td> <td> abhydrolase domain containing 4 </td> <td> ABHD4 </td> <td> 63874 </td> <td> NM_022060 /// XM_005267986 /// XR_245712 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation </td> <td>  </td> <td> 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -45.27 </td> <td> 184.56 </td> <td> -3.25 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 219837_s_at </td> <td> 219837_s_at </td> <td> NM_018659 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018659.1 /DEF=Homo sapiens cytokine-like protein C17 (C17), mRNA. /FEA=mRNA /GEN=C17 /PROD=cytokine-like protein C17 /DB_XREF=gi:8922107 /UG=Hs.13872 cytokine-like protein C17 /FL=gb:AF193766.1 gb:NM_018659.1 </td> <td> NM_018659 </td> <td> cytokine-like 1 </td> <td> CYTL1 </td> <td> 54360 </td> <td> NM_018659 </td> <td> 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050650 // chondroitin sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 1990079 // cartilage homeostasis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement </td> <td> 0005102 // receptor binding // traceable author statement </td> <td> 107.95 </td> <td> 238.15 </td> <td> 3.25 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209656_s_at </td> <td> 209656_s_at </td> <td> AL136550 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136550.1 /DEF=Homo sapiens mRNA; cDNA DKFZp761J17121 (from clone DKFZp761J17121); complete cds.  /FEA=mRNA /GEN=DKFZp761J17121 /PROD=hypothetical protein /DB_XREF=gi:13276606 /UG=Hs.8769 Homo sapiens mRNA; cDNA DKFZp761J17121 (from clone DKFZp761J17121); complete cds /FL=gb:AL136550.1 </td> <td> AL136550 </td> <td> transmembrane protein 47 </td> <td> TMEM47 </td> <td> 83604 </td> <td> NM_031442 </td> <td>  </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td>  </td> <td> 49.78 </td> <td> 268.99 </td> <td> 3.25 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 213256_at </td> <td> 213256_at </td> <td> AW593996 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW593996 /FEA=EST /DB_XREF=gi:7281254 /DB_XREF=est:hg41g06.x1 /CLONE=IMAGE:2948218 /UG=Hs.124969 Homo sapiens clone 24707 mRNA sequence </td> <td> AW593996 </td> <td> membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase </td> <td> MARCH3 </td> <td> 115123 </td> <td> NM_178450 /// XM_005271870 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0005764 // lysosome // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -120.55 </td> <td> 202.78 </td> <td> -3.25 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202742_s_at </td> <td> 202742_s_at </td> <td> NM_002731 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002731.1 /DEF=Homo sapiens protein kinase, cAMP-dependent, catalytic, beta (PRKACB), mRNA.  /FEA=mRNA /GEN=PRKACB /PROD=protein kinase, cAMP-dependent, catalytic, beta /DB_XREF=gi:4506056 /UG=Hs.87773 protein kinase, cAMP-dependent, catalytic, beta /FL=gb:M34181.1 gb:NM_002731.1 </td> <td> NM_002731 </td> <td> protein kinase, cAMP-dependent, catalytic, beta </td> <td> PRKACB </td> <td> 5567 </td> <td> NM_001242857 /// NM_001242858 /// NM_001242859 /// NM_001242860 /// NM_001242861 /// NM_001242862 /// NM_002731 /// NM_182948 /// NM_207578 /// XM_005271015 /// XM_005271016 /// XM_005271017 /// XM_005271018 /// XM_005271019 /// XM_005271020 /// XM_005271021 /// XM_005271022 /// XM_005271023 /// XM_006710758 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051447 // negative regulation of meiotic cell cycle // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0097338 // response to clozapine // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005952 // cAMP-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay </td> <td> 74.03 </td> <td> 197.64 </td> <td> 3.25 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208820_at </td> <td> 208820_at </td> <td> AL037339 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL037339 /FEA=EST /DB_XREF=gi:5406748 /DB_XREF=est:DKFZp564F1271_s1 /CLONE=DKFZp564F1271 /UG=Hs.740 PTK2 protein tyrosine kinase 2 /FL=gb:L13616.1 </td> <td> AL037339 </td> <td> protein tyrosine kinase 2 </td> <td> PTK2 </td> <td> 5747 </td> <td> NM_001199649 /// NM_005607 /// NM_153831 /// XM_005251003 /// XM_005251004 /// XM_005251005 /// XM_005251006 /// XM_005251007 /// XM_005251008 /// XM_005251009 /// XM_005251010 /// XM_005251011 /// XM_005251012 /// XM_005251013 /// XM_005251014 /// XM_006716606 /// XM_006716607 /// XM_006716608 /// XM_006716609 /// XM_006716610 </td> <td> 0000165 // MAPK cascade // inferred from electronic annotation /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0001525 // angiogenesis // traceable author statement /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001890 // placenta development // traceable author statement /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0003007 // heart morphogenesis // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007172 // signal complex assembly // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from mutant phenotype /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0009790 // embryo development // traceable author statement /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010594 // regulation of endothelial cell migration // traceable author statement /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from mutant phenotype /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0021955 // central nervous system neuron axonogenesis // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0030010 // establishment of cell polarity // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0030644 // cellular chloride ion homeostasis // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // traceable author statement /// 0032355 // response to estradiol // inferred from electronic annotation /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0038007 // netrin-activated signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0040023 // establishment of nucleus localization // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045667 // regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0045909 // positive regulation of vasodilation // inferred from electronic annotation /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048870 // cell motility // traceable author statement /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // traceable author statement /// 0051893 // regulation of focal adhesion assembly // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling // inferred from mutant phenotype /// 0051964 // negative regulation of synapse assembly // inferred from electronic annotation /// 0060252 // positive regulation of glial cell proliferation // inferred from electronic annotation /// 0060396 // growth hormone receptor signaling pathway // inferred from direct assay /// 2000060 // positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0004672 // protein kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008432 // JUN kinase binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation </td> <td> -48.32 </td> <td> 320.84 </td> <td> -3.25 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208744_x_at </td> <td> 208744_x_at </td> <td> BG403660 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG403660 /FEA=EST /DB_XREF=gi:13297108 /DB_XREF=est:602419382F1 /CLONE=IMAGE:4526180 /UG=Hs.36927 heat shock 105kD /FL=gb:D86956.1 gb:AB003334.1 </td> <td> BG403660 </td> <td> heat shock 105kDa/110kDa protein 1 </td> <td> HSPH1 </td> <td> 10808 </td> <td> NM_001286503 /// NM_001286504 /// NM_001286505 /// NM_006644 /// XM_005266236 /// XM_006719757 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0045345 // positive regulation of MHC class I biosynthetic process // traceable author statement /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051135 // positive regulation of NK T cell activation // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from electronic annotation </td> <td> 56.92 </td> <td> 92.74 </td> <td> 3.25 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218496_at </td> <td> 218496_at </td> <td> BG534527 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG534527 /FEA=EST /DB_XREF=gi:13526067 /DB_XREF=est:602553771F1 /CLONE=IMAGE:4663504 /UG=Hs.178655 ribonuclease H1 /FL=gb:BC002973.1 gb:AF048994.1 gb:AF048995.1 gb:AF039652.1 gb:NM_002936.1 </td> <td> BG534527 </td> <td> ribonuclease H1 </td> <td> RNASEH1 </td> <td> 246243 </td> <td> NM_001286834 /// NM_001286837 /// NM_002936 /// XR_244873 </td> <td> 0006264 // mitochondrial DNA replication // inferred from electronic annotation /// 0006401 // RNA catabolic process // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090501 // RNA phosphodiester bond hydrolysis // traceable author statement /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004523 // RNA-DNA hybrid ribonuclease activity // inferred from electronic annotation /// 0004540 // ribonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 51.00 </td> <td> 102.50 </td> <td> 3.24 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203848_at </td> <td> 203848_at </td> <td> AL050160 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL050160.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586B1222 (from clone DKFZp586B1222); partial cds.  /FEA=mRNA /GEN=DKFZp586B1222 /PROD=hypothetical protein /DB_XREF=gi:4884373 /UG=Hs.25059 A kinase (PRKA) anchor protein 8 /FL=gb:NM_005858.1 </td> <td> AL050160 </td> <td> A kinase (PRKA) anchor protein 8 </td> <td> AKAP8 </td> <td> 10270 </td> <td> NM_005858 /// XM_005259706 /// XR_244062 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007067 // mitotic nuclear division // traceable author statement /// 0007076 // mitotic chromosome condensation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0000793 // condensed chromosome // inferred from electronic annotation /// 0001939 // female pronucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0034237 // protein kinase A regulatory subunit binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 35.17 </td> <td> 65.89 </td> <td> 3.24 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 221831_at </td> <td> 221831_at </td> <td> AV741657 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV741657 /FEA=EST /DB_XREF=gi:10859238 /DB_XREF=est:AV741657 /CLONE=CBMALG01 /UG=Hs.154085 leucine zipper protein 1 </td> <td> AV741657 </td> <td> leucine zipper protein 1 </td> <td> LUZP1 </td> <td> 7798 </td> <td> NM_001142546 /// NM_033631 </td> <td> 0003281 // ventricular septum development // inferred from electronic annotation /// 0021503 // neural fold bending // inferred from electronic annotation /// 0060840 // artery development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td>  </td> <td> 59.55 </td> <td> 81.12 </td> <td> 3.24 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 219001_s_at </td> <td> 219001_s_at </td> <td> NM_024345 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024345.1 /DEF=Homo sapiens hypothetical protein MGC10765 (MGC10765), mRNA. /FEA=mRNA /GEN=MGC10765 /PROD=hypothetical protein MGC10765 /DB_XREF=gi:13236596 /UG=Hs.317589 hypothetical protein MGC10765 /FL=gb:BC003520.1 gb:NM_024345.1 </td> <td> NM_024345 </td> <td> DDB1 and CUL4 associated factor 10 </td> <td> DCAF10 </td> <td> 79269 </td> <td> NM_001286810 /// NM_024345 /// XM_005251577 /// XM_005251578 </td> <td> 0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0080008 // Cul4-RING E3 ubiquitin ligase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 37.55 </td> <td> 49.35 </td> <td> 3.24 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 207654_x_at </td> <td> 207654_x_at </td> <td> NM_001938 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001938.1 /DEF=Homo sapiens down-regulator of transcription 1, TBP-binding (negative cofactor 2) (DR1), mRNA.  /FEA=mRNA /GEN=DR1 /PROD=down-regulator of transcription 1 /DB_XREF=gi:4503380 /UG=Hs.16697 down-regulator of transcription 1, TBP-binding (negative cofactor 2) /FL=gb:M97388.1 gb:NM_001938.1 </td> <td> NM_001938 </td> <td> down-regulator of transcription 1, TBP-binding (negative cofactor 2) </td> <td> DR1 </td> <td> 1810 </td> <td> NM_001938 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay </td> <td> 0003677 // DNA binding // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0017025 // TBP-class protein binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -61.90 </td> <td> 248.25 </td> <td> -3.24 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202713_s_at </td> <td> 202713_s_at </td> <td> AA129755 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA129755 /FEA=EST /DB_XREF=gi:1690165 /DB_XREF=est:zl16b10.s1 /CLONE=IMAGE:502075 /UG=Hs.154668 KIAA0391 gene product /FL=gb:AB002389.1 gb:NM_014672.1 </td> <td> AA129755 </td> <td> KIAA0391 /// proteasome (prosome, macropain) subunit, alpha type, 6 </td> <td> KIAA0391 /// PSMA6 </td> <td> 5687 /// 9692 </td> <td> NM_001256678 /// NM_001256679 /// NM_001256680 /// NM_001256681 /// NM_001282232 /// NM_001282233 /// NM_001282234 /// NM_002791 /// NM_014672 /// NR_104110 /// XM_005268237 /// XM_006720334 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0008033 // tRNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050727 // regulation of inflammatory response // inferred by curator /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from mutant phenotype </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0005839 // proteasome core complex // non-traceable author statement /// 0005844 // polysome // inferred from direct assay /// 0016363 // nuclear matrix // inferred from sequence or structural similarity /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from direct assay /// 0019773 // proteasome core complex, alpha-subunit complex // traceable author statement /// 0030016 // myofibril // inferred from sequence or structural similarity /// 0030017 // sarcomere // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // non-traceable author statement /// 0004175 // endopeptidase activity // non-traceable author statement /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0035639 // purine ribonucleoside triphosphate binding // non-traceable author statement /// 0051059 // NF-kappaB binding // inferred from physical interaction </td> <td> 46.33 </td> <td> 150.76 </td> <td> 3.24 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 210076_x_at </td> <td> 210076_x_at </td> <td> AF151813 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF151813.1 /DEF=Homo sapiens CGI-55 protein mRNA, complete cds. /FEA=mRNA /PROD=CGI-55 protein /DB_XREF=gi:4929578 /UG=Hs.165998 PAI-1 mRNA-binding protein /FL=gb:AF151813.1 </td> <td> AF151813 </td> <td> SERPINE1 mRNA binding protein 1 </td> <td> SERBP1 </td> <td> 26135 </td> <td> NM_001018067 /// NM_001018068 /// NM_001018069 /// NM_015640 </td> <td> 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 150.77 </td> <td> 394.11 </td> <td> 3.24 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 219097_x_at </td> <td> 219097_x_at </td> <td> NM_024104 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024104.1 /DEF=Homo sapiens hypothetical protein MGC2747 (MGC2747), mRNA. /FEA=mRNA /GEN=MGC2747 /PROD=hypothetical protein MGC2747 /DB_XREF=gi:13129111 /UG=Hs.227203 hypothetical protein MGC2747 /FL=gb:BC001680.1 gb:BC001948.1 gb:NM_024104.1 </td> <td> NM_024104 </td> <td> small integral membrane protein 7 </td> <td> SMIM7 </td> <td> 79086 </td> <td> NM_024104 /// XM_005260074 /// XR_244083 /// XR_244084 /// XR_244085 /// XR_244086 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 80.33 </td> <td> 170.31 </td> <td> 3.23 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 206461_x_at </td> <td> 206461_x_at </td> <td> NM_005951 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005951.1 /DEF=Homo sapiens metallothionein 1H (MT1H), mRNA. /FEA=mRNA /GEN=MT1H /PROD=metallothionein 1H /DB_XREF=gi:10835084 /UG=Hs.2667 metallothionein 1H /FL=gb:NM_005951.1 </td> <td> NM_005951 </td> <td> metallothionein 1H </td> <td> MT1H </td> <td> 4496 </td> <td> NM_005951 </td> <td> 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0071276 // cellular response to cadmium ion // inferred from expression pattern /// 0071294 // cellular response to zinc ion // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -1278.83 </td> <td> 2444.66 </td> <td> -3.23 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 204519_s_at </td> <td> 204519_s_at </td> <td> NM_015993 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015993.1 /DEF=Homo sapiens plasmolipin (LOC51090), mRNA. /FEA=mRNA /GEN=LOC51090 /PROD=plasmolipin /DB_XREF=gi:7705754 /UG=Hs.12701 plasmolipin /FL=gb:AF137386.1 gb:NM_015993.1 </td> <td> NM_015993 </td> <td> plasmolipin </td> <td> PLLP </td> <td> 51090 </td> <td> NM_015993 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043218 // compact myelin // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> -38.00 </td> <td> 65.15 </td> <td> -3.23 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 213340_s_at </td> <td> 213340_s_at </td> <td> AI073551 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI073551 /FEA=EST /DB_XREF=gi:3400195 /DB_XREF=est:ov45e10.x1 /CLONE=IMAGE:1640298 /UG=Hs.49658 KIAA0495 </td> <td> AI073551 </td> <td> TP73 antisense RNA 1 </td> <td> TP73-AS1 </td> <td> 57212 </td> <td> NM_207306 /// NR_033708 /// NR_033709 /// NR_033710 /// NR_033711 /// NR_033712 </td> <td>  </td> <td> 0005576 // extracellular region // inferred from electronic annotation </td> <td>  </td> <td> 32.28 </td> <td> 95.31 </td> <td> 3.23 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200065_s_at </td> <td> 200065_s_at </td> <td> AF052179 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF052179.1 /DEF=Homo sapiens clone 24537 ADP-ribosylation factor 1 mRNA, complete cds.  /FEA=mRNA /PROD=ADP-ribosylation factor 1 /DB_XREF=gi:3360490 /UG=Hs.74571 ADP-ribosylation factor 1 /FL=gb:M84326.1 gb:M36340.1 gb:AF055002.1 gb:AF052179.1 gb:NM_001658.2 </td> <td> AF052179 </td> <td> ADP-ribosylation factor 1 /// microRNA 3620 </td> <td> ARF1 /// MIR3620 </td> <td> 375 /// 100500810 </td> <td> NM_001024226 /// NM_001024227 /// NM_001024228 /// NM_001658 /// NR_037415 </td> <td> 0002090 // regulation of receptor internalization // inferred from sequence or structural similarity /// 0006184 // GTP catabolic process // traceable author statement /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from mutant phenotype /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0034315 // regulation of Arp2/3 complex-mediated actin nucleation // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0060292 // long term synaptic depression // inferred from sequence or structural similarity /// 0061024 // membrane organization // traceable author statement /// 0097061 // dendritic spine organization // inferred from sequence or structural similarity </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030017 // sarcomere // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -229.82 </td> <td> 1474.66 </td> <td> -3.23 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218316_at </td> <td> 218316_at </td> <td> NM_012460 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012460.1 /DEF=Homo sapiens translocase of inner mitochondrial membrane 9 (yeast) homolog (TIMM9), mRNA.  /FEA=mRNA /GEN=TIMM9 /PROD=translocase of inner mitochondrial membrane 9(yeast) homolog /DB_XREF=gi:6912713 /UG=Hs.323914 translocase of inner mitochondrial membrane 9 (yeast) homolog /FL=gb:AF150100.1 gb:AF152353.1 gb:NM_012460.1 </td> <td> NM_012460 </td> <td> translocase of inner mitochondrial membrane 9 homolog (yeast) </td> <td> TIMM9 </td> <td> 26520 </td> <td> NM_012460 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045039 // protein import into mitochondrial inner membrane // inferred from direct assay /// 0045039 // protein import into mitochondrial inner membrane // inferred from sequence or structural similarity /// 0072321 // chaperone-mediated protein transport // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0042719 // mitochondrial intermembrane space protein transporter complex // inferred from direct assay /// 0042719 // mitochondrial intermembrane space protein transporter complex // traceable author statement </td> <td> 0005215 // transporter activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> -52.30 </td> <td> 193.00 </td> <td> -3.23 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 213801_x_at </td> <td> 213801_x_at </td> <td> AW304232 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW304232 /FEA=EST /DB_XREF=gi:6713921 /DB_XREF=est:xv82g01.x1 /CLONE=IMAGE:2825040 /UG=Hs.181357 laminin receptor 1 (67kD, ribosomal protein SA) </td> <td> AW304232 </td> <td> ribosomal protein SA /// ribosomal protein SA pseudogene 19 /// ribosomal protein SA pseudogene 58 /// ribosomal protein SA pseudogene 9 /// small nucleolar RNA, H/ACA box 6 /// small nucleolar RNA, H/ACA box 62 </td> <td> RPSA /// RPSAP19 /// RPSAP58 /// RPSAP9 /// SNORA6 /// SNORA62 </td> <td> 3921 /// 6044 /// 388524 /// 574040 /// 653162 /// 730029 </td> <td> NM_001005472 /// NM_001012321 /// NM_002295 /// NR_002324 /// NR_002325 /// NR_003662 /// NR_026890 </td> <td> 0000028 // ribosomal small subunit assembly // not recorded /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000447 // endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // not recorded /// 0000461 // endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // not recorded /// 0006407 // rRNA export from nucleus // not recorded /// 0006412 // translation // not recorded /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030686 // 90S preribosome // not recorded /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // not recorded /// 0005055 // laminin receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from physical interaction /// 0043236 // laminin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -668.92 </td> <td> 3241.86 </td> <td> -3.23 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208786_s_at </td> <td> 208786_s_at </td> <td> AF183417 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF183417.1 /DEF=Homo sapiens microtubule-associated proteins 1A1B light chain 3 mRNA, complete cds.  /FEA=mRNA /PROD=microtubule-associated proteins 1A1B lightchain 3 /DB_XREF=gi:9963772 /UG=Hs.121849 microtubule-associated proteins 1A1B light chain 3 /FL=gb:AF303888.1 gb:NM_022818.2 gb:AF183417.1 </td> <td> AF183417 </td> <td> microtubule-associated protein 1 light chain 3 beta </td> <td> MAP1LC3B </td> <td> 81631 </td> <td> NM_022818 /// XM_005256184 </td> <td> 0000045 // autophagic vacuole assembly // not recorded /// 0000422 // mitochondrion degradation // not recorded /// 0006914 // autophagy // inferred from electronic annotation /// 0006995 // cellular response to nitrogen starvation // not recorded /// 0032258 // CVT pathway // not recorded /// 0034727 // piecemeal microautophagy of nucleus // not recorded /// 0044805 // late nucleophagy // not recorded /// 0071211 // protein targeting to vacuole involved in autophagy // not recorded </td> <td> 0000407 // pre-autophagosomal structure // not recorded /// 0000421 // autophagic vacuole membrane // not recorded /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from sequence or structural similarity /// 0005829 // cytosol // not recorded /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005930 // axoneme // inferred from sequence or structural similarity /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // not recorded /// 0008429 // phosphatidylethanolamine binding // not recorded /// 0050811 // GABA receptor binding // not recorded </td> <td> -135.58 </td> <td> 701.16 </td> <td> -3.23 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208645_s_at </td> <td> 208645_s_at </td> <td> AF116710 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF116710.1 /DEF=Homo sapiens PRO2640 mRNA, complete cds. /FEA=mRNA /PROD=PRO2640 /DB_XREF=gi:7959918 /UG=Hs.244621 ribosomal protein S14 /FL=gb:BC001126.1 gb:BC003401.1 gb:NM_005617.1 gb:AF116710.1 </td> <td> AF116710 </td> <td> ribosomal protein S14 </td> <td> RPS14 </td> <td> 6208 </td> <td> NM_001025070 /// NM_001025071 /// NM_005617 /// XM_006714790 </td> <td> 0000028 // ribosomal small subunit assembly // inferred from mutant phenotype /// 0000028 // ribosomal small subunit assembly // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006417 // regulation of translation // inferred from mutant phenotype /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0030218 // erythrocyte differentiation // inferred from mutant phenotype /// 0030490 // maturation of SSU-rRNA // inferred from sequence or structural similarity /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from sequence or structural similarity /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0045182 // translation regulator activity // inferred from mutant phenotype /// 0048027 // mRNA 5'-UTR binding // inferred from direct assay </td> <td> -1022.63 </td> <td> 4000.26 </td> <td> -3.23 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203480_s_at </td> <td> 203480_s_at </td> <td> NM_014928 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014928.1 /DEF=Homo sapiens KIAA1046 protein (KIAA1046), mRNA. /FEA=mRNA /GEN=KIAA1046 /PROD=KIAA1046 protein /DB_XREF=gi:7662459 /UG=Hs.89519 KIAA1046 protein /FL=gb:AB028969.1 gb:NM_014928.1 </td> <td> NM_014928 </td> <td> OTU deubiquitinase 4 </td> <td> OTUD4 </td> <td> 54726 </td> <td> NM_001102653 /// NM_017493 /// NM_199324 /// XM_005263079 /// XM_005263080 /// XM_005263081 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay </td> <td>  </td> <td> 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -130.50 </td> <td> 325.48 </td> <td> -3.22 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 213025_at </td> <td> 213025_at </td> <td> AL134904 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL134904 /FEA=EST /DB_XREF=gi:6603091 /DB_XREF=est:DKFZp762M0710_s1 /CLONE=DKFZp762M0710 /UG=Hs.268371 hypothetical protein FLJ20274 </td> <td> AL134904 </td> <td> THUMP domain containing 1 </td> <td> THUMPD1 </td> <td> 55623 </td> <td> NM_017736 /// XM_005255422 /// XM_005255424 </td> <td>  </td> <td>  </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 33.65 </td> <td> 72.05 </td> <td> 3.22 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209558_s_at </td> <td> 209558_s_at </td> <td> AB013384 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB013384.1 /DEF=Homo sapiens mRNA for HIP1R, complete cds. /FEA=mRNA /GEN=HIP1R /PROD=HIP1R /DB_XREF=gi:3721835 /UG=Hs.96731 huntingtin interacting protein-1-related /FL=gb:AB013384.1 </td> <td> AB013384 </td> <td> huntingtin interacting protein 1 related </td> <td> HIP1R </td> <td> 9026 </td> <td> NM_003959 /// XM_005253627 /// XM_005253628 /// XM_006719683 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay </td> <td> 78.62 </td> <td> 143.94 </td> <td> 3.22 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 210633_x_at </td> <td> 210633_x_at </td> <td> M19156 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M19156.1 /DEF=Human acidic keratin-10 mRNA, complete cds. /FEA=mRNA /GEN=KRT10 /DB_XREF=gi:186769 /UG=Hs.99936 keratin 10 (epidermolytic hyperkeratosis; keratosis palmaris et plantaris) /FL=gb:M19156.1 </td> <td> M19156 </td> <td> keratin 10 </td> <td> KRT10 </td> <td> 3858 </td> <td> NM_000421 /// XM_005257343 </td> <td> 0030216 // keratinocyte differentiation // inferred from expression pattern /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005882 // intermediate filament // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0045095 // keratin filament // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0030280 // structural constituent of epidermis // non-traceable author statement </td> <td> 101.75 </td> <td> 354.80 </td> <td> 3.22 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202245_at </td> <td> 202245_at </td> <td> AW084510 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW084510 /FEA=EST /DB_XREF=gi:6039662 /DB_XREF=est:wz24g11.x1 /CLONE=IMAGE:2559044 /UG=Hs.93199 lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) /FL=gb:NM_002340.1 gb:U22526.1 </td> <td> AW084510 </td> <td> lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) </td> <td> LSS </td> <td> 4047 </td> <td> NM_001001438 /// NM_001145436 /// NM_001145437 /// NM_002340 /// XM_006724003 /// XM_006724004 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from mutant phenotype /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005811 // lipid particle // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000250 // lanosterol synthase activity // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016866 // intramolecular transferase activity // inferred from electronic annotation </td> <td> 60.47 </td> <td> 183.86 </td> <td> 3.22 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 215836_s_at </td> <td> 215836_s_at </td> <td> AK026188 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026188.1 /DEF=Homo sapiens cDNA: FLJ22535 fis, clone HRC13115, highly similar to AF152336 Homo sapiens protocadherin gamma B7 (PCDH-gamma-B7) mRNA.  /FEA=mRNA /DB_XREF=gi:10438958 /UG=Hs.284180 protocadherin gamma subfamily A, 1 </td> <td> AK026188 </td> <td> protocadherin gamma subfamily A, 1 /// protocadherin gamma subfamily A, 10 /// protocadherin gamma subfamily A, 11 /// protocadherin gamma subfamily A, 12 /// protocadherin gamma subfamily A, 2 /// protocadherin gamma subfamily A, 3 /// protocadherin gamma subfamily A, 4 /// protocadherin gamma subfamily A, 5 /// protocadherin gamma subfamily A, 6 /// protocadherin gamma subfamily A, 7 /// protocadherin gamma subfamily A, 8 /// protocadherin gamma subfamily A, 9 /// protocadherin gamma subfamily B, 1 /// protocadherin gamma subfamily B, 2 /// protocadherin gamma subfamily B, 3 /// protocadherin gamma subfamily B, 4 /// protocadherin gamma subfamily B, 5 /// protocadherin gamma subfamily B, 6 /// protocadherin gamma subfamily B, 7 /// protocadherin gamma subfamily C, 3 /// protocadherin gamma subfamily C, 4 /// protocadherin gamma subfamily C, 5 </td> <td> PCDHGA1 /// PCDHGA10 /// PCDHGA11 /// PCDHGA12 /// PCDHGA2 /// PCDHGA3 /// PCDHGA4 /// PCDHGA5 /// PCDHGA6 /// PCDHGA7 /// PCDHGA8 /// PCDHGA9 /// PCDHGB1 /// PCDHGB2 /// PCDHGB3 /// PCDHGB4 /// PCDHGB5 /// PCDHGB6 /// PCDHGB7 /// PCDHGC3 /// PCDHGC4 /// PCDHGC5 </td> <td> 5098 /// 8641 /// 9708 /// 26025 /// 56097 /// 56098 /// 56099 /// 56100 /// 56101 /// 56102 /// 56103 /// 56104 /// 56105 /// 56106 /// 56107 /// 56108 /// 56109 /// 56110 /// 56111 /// 56112 /// 56113 /// 56114 </td> <td> NM_002588 /// NM_003735 /// NM_003736 /// NM_014004 /// NM_018912 /// NM_018913 /// NM_018914 /// NM_018915 /// NM_018916 /// NM_018917 /// NM_018918 /// NM_018919 /// NM_018920 /// NM_018921 /// NM_018922 /// NM_018923 /// NM_018924 /// NM_018925 /// NM_018926 /// NM_018927 /// NM_018928 /// NM_018929 /// NM_031993 /// NM_032009 /// NM_032011 /// NM_032053 /// NM_032054 /// NM_032086 /// NM_032087 /// NM_032088 /// NM_032089 /// NM_032090 /// NM_032091 /// NM_032092 /// NM_032094 /// NM_032095 /// NM_032096 /// NM_032097 /// NM_032098 /// NM_032099 /// NM_032100 /// NM_032101 /// NM_032402 /// NM_032403 /// NM_032406 /// NM_032407 </td> <td> 0007155 // cell adhesion // traceable author statement /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -87.12 </td> <td> 298.26 </td> <td> -3.22 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 219526_at </td> <td> 219526_at </td> <td> NM_024644 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024644.1 /DEF=Homo sapiens hypothetical protein FLJ21802 (FLJ21802), mRNA. /FEA=mRNA /GEN=FLJ21802 /PROD=hypothetical protein FLJ21802 /DB_XREF=gi:13375884 /UG=Hs.48938 hypothetical protein FLJ21802 /FL=gb:NM_024644.1 </td> <td> NM_024644 </td> <td> chromosome 14 open reading frame 169 </td> <td> C14orf169 </td> <td> 79697 </td> <td> NM_024644 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from sequence or structural similarity /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070544 // histone H3-K36 demethylation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation </td> <td> 0005506 // iron ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from sequence or structural similarity /// 0032453 // histone demethylase activity (H3-K4 specific) // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from sequence or structural similarity </td> <td> 56.00 </td> <td> 156.05 </td> <td> 3.22 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212053_at </td> <td> 212053_at </td> <td> AK025504 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK025504.1 /DEF=Homo sapiens cDNA: FLJ21851 fis, clone HEP01962. /FEA=mRNA /DB_XREF=gi:10438041 /UG=Hs.170218 KIAA0251 protein </td> <td> AK025504 </td> <td> pyridoxal-dependent decarboxylase domain-containing protein 1-like /// pyridoxal-dependent decarboxylase domain containing 1 </td> <td> LOC102724985 /// PDXDC1 </td> <td> 23042 /// 102724985 </td> <td> NM_001285444 /// NM_001285445 /// NM_001285447 /// NM_001285448 /// NM_001285449 /// NM_001285450 /// NM_015027 /// XM_005255173 /// XM_005255174 /// XM_005255176 /// XM_006720865 /// XM_006720866 /// XM_006725223 /// XM_006725224 /// XM_006725225 /// XM_006725226 /// XM_006725227 /// XM_006725228 /// XM_006725229 /// XM_006726595 /// XM_006726596 /// XM_006726597 /// XM_006726598 /// XM_006726599 /// XM_006726600 /// XM_006726601 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0019752 // carboxylic acid metabolic process // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation </td> <td> 45.60 </td> <td> 216.10 </td> <td> 3.22 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209572_s_at </td> <td> 209572_s_at </td> <td> AF080227 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF080227.1 /DEF=Homo sapiens embryonic ectoderm development protein mRNA, complete cds.  /FEA=mRNA /PROD=embryonic ectoderm development protein /DB_XREF=gi:3420789 /UG=Hs.151461 embryonic ectoderm development /FL=gb:AF080227.1 gb:U90651.1 gb:AF078933.1 </td> <td> AF080227 </td> <td> embryonic ectoderm development </td> <td> EED </td> <td> 8726 </td> <td> NM_003797 /// NM_152991 /// XM_005274373 /// XM_006718730 /// XM_006718731 /// XR_247215 </td> <td> 0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement /// 0061087 // positive regulation of histone H3-K27 methylation // inferred from electronic annotation </td> <td> 0001739 // sex chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from direct assay /// 0045120 // pronucleus // inferred from electronic annotation </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042054 // histone methyltransferase activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 44.33 </td> <td> 84.56 </td> <td> 3.22 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 204593_s_at </td> <td> 204593_s_at </td> <td> AA046752 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA046752 /FEA=EST /DB_XREF=gi:1524716 /DB_XREF=est:zf12e10.s1 /CLONE=IMAGE:376746 /UG=Hs.240062 hypothetical protein /FL=gb:U79252.1 gb:NM_013298.1 </td> <td> AA046752 </td> <td> mitochondrial elongation factor 1 </td> <td> MIEF1 </td> <td> 54471 </td> <td> NM_019008 /// XM_005261652 </td> <td> 0000266 // mitochondrial fission // inferred from mutant phenotype /// 0008053 // mitochondrial fusion // inferred from mutant phenotype /// 0090141 // positive regulation of mitochondrial fission // inferred from direct assay /// 0090141 // positive regulation of mitochondrial fission // traceable author statement /// 0090314 // positive regulation of protein targeting to membrane // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005777 // peroxisome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019003 // GDP binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0043531 // ADP binding // inferred from direct assay </td> <td> 32.10 </td> <td> 70.95 </td> <td> 3.22 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 74694_s_at </td> <td> 74694_s_at </td> <td> AA907940 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AA907940:ol24e02.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-1524410 /clone_end=3' /gb=AA907940 /gi=3041944 /ug=Hs.234006 /len=404 </td> <td> AA907940 </td> <td> rabaptin, RAB GTPase binding effector protein 2 </td> <td> RABEP2 </td> <td> 79874 </td> <td> NM_024816 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation </td> <td> 36.05 </td> <td> 77.08 </td> <td> 3.22 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202870_s_at </td> <td> 202870_s_at </td> <td> NM_001255 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001255.1 /DEF=Homo sapiens CDC20 (cell division cycle 20, S. cerevisiae, homolog) (CDC20), mRNA.  /FEA=mRNA /GEN=CDC20 /PROD=cell division cycle 20 /DB_XREF=gi:4557436 /UG=Hs.82906 CDC20 (cell division cycle 20, S. cerevisiae, homolog) /FL=gb:BC001088.1 gb:AF099644.1 gb:NM_001255.1 gb:U05340.1 </td> <td> NM_001255 </td> <td> cell division cycle 20 </td> <td> CDC20 </td> <td> 991 </td> <td> NM_001255 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // traceable author statement /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031915 // positive regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0040020 // regulation of meiosis // inferred from electronic annotation /// 0050773 // regulation of dendrite development // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051488 // activation of anaphase-promoting complex activity // inferred from direct assay /// 0090129 // positive regulation of synapse maturation // inferred from sequence or structural similarity </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> 57.55 </td> <td> 154.47 </td> <td> 3.22 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209134_s_at </td> <td> 209134_s_at </td> <td> BC000524 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000524.1 /DEF=Homo sapiens, Similar to ribosomal protein S6, clone MGC:8597, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to ribosomal protein S6 /DB_XREF=gi:12653504 /UG=Hs.241507 ribosomal protein S6 /FL=gb:BC000524.1 gb:J03537.1 </td> <td> BC000524 </td> <td> ribosomal protein S6 </td> <td> RPS6 </td> <td> 6194 </td> <td> NM_001010 </td> <td> 0000028 // ribosomal small subunit assembly // inferred from electronic annotation /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0031929 // TOR signaling // inferred from direct assay /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030425 // dendrite // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0044297 // cell body // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -754.60 </td> <td> 3663.97 </td> <td> -3.21 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200999_s_at </td> <td> 200999_s_at </td> <td> NM_006825 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006825.1 /DEF=Homo sapiens transmembrane protein (63kD), endoplasmic reticulumGolgi intermediate compartment (P63), mRNA.  /FEA=mRNA /GEN=P63 /PROD=transmembrane protein (63kD), endoplasmicreticulumGolgi intermediate compartment /DB_XREF=gi:5803112 /UG=Hs.74368 transmembrane protein (63kD), endoplasmic reticulumGolgi intermediate compartment /FL=gb:NM_006825.1 </td> <td> NM_006825 </td> <td> cytoskeleton-associated protein 4 </td> <td> CKAP4 </td> <td> 10970 </td> <td> NM_006825 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0032784 // regulation of DNA-templated transcription, elongation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 325.82 </td> <td> 1378.79 </td> <td> 3.21 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212240_s_at </td> <td> 212240_s_at </td> <td> AI679268 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI679268 /FEA=EST /DB_XREF=gi:4889450 /DB_XREF=est:tu62e04.x1 /CLONE=IMAGE:2255646 /UG=Hs.6241 phosphoinositide-3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) </td> <td> AI679268 </td> <td> phosphoinositide-3-kinase, regulatory subunit 1 (alpha) </td> <td> PIK3R1 </td> <td> 5295 </td> <td> NM_001242466 /// NM_181504 /// NM_181523 /// NM_181524 /// XM_005248542 </td> <td> 0001953 // negative regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from physical interaction /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase signaling // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0034644 // cellular response to UV // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043551 // regulation of phosphatidylinositol 3-kinase activity // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045671 // negative regulation of osteoclast differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from sequence or structural similarity /// 0046854 // phosphatidylinositol phosphorylation // inferred from sequence or structural similarity /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from physical interaction /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051531 // NFAT protein import into nucleus // inferred from electronic annotation /// 0060396 // growth hormone receptor signaling pathway // inferred from direct assay /// 0090004 // positive regulation of establishment of protein localization to plasma membrane // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005942 // phosphatidylinositol 3-kinase complex // inferred from sequence or structural similarity /// 0005943 // 1-phosphatidylinositol-4-phosphate 3-kinase, class IA complex // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0003924 // GTPase activity // inferred from electronic annotation /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from sequence or structural similarity /// 0005158 // insulin receptor binding // inferred from physical interaction /// 0005159 // insulin-like growth factor receptor binding // inferred from physical interaction /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // non-traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0035014 // phosphatidylinositol 3-kinase regulator activity // inferred from sequence or structural similarity /// 0043125 // ErbB-3 class receptor binding // inferred from direct assay /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from sequence or structural similarity /// 0043559 // insulin binding // inferred from direct assay /// 0043560 // insulin receptor substrate binding // inferred from sequence or structural similarity </td> <td> -35.37 </td> <td> 70.11 </td> <td> -3.21 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202453_s_at </td> <td> 202453_s_at </td> <td> NM_005316 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005316.1 /DEF=Homo sapiens general transcription factor IIH, polypeptide 1 (62kD subunit) (GTF2H1), mRNA.  /FEA=mRNA /GEN=GTF2H1 /PROD=general transcription factor IIH, polypeptide 1(62kD subunit) /DB_XREF=gi:4885364 /UG=Hs.89578 general transcription factor IIH, polypeptide 1 (62kD subunit) /FL=gb:BC000365.1 gb:BC004452.1 gb:M95809.1 gb:NM_005316.1 </td> <td> NM_005316 </td> <td> general transcription factor IIH, polypeptide 1, 62kDa </td> <td> GTF2H1 </td> <td> 2965 </td> <td> NM_001142307 /// NM_005316 /// XM_006718208 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006362 // transcription elongation from RNA polymerase I promoter // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0000439 // core TFIIH complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005675 // holo TFIIH complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0004672 // protein kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from direct assay </td> <td> -32.33 </td> <td> 115.76 </td> <td> -3.21 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209129_at </td> <td> 209129_at </td> <td> AF000974 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF000974.1 /DEF=Human zyxin related protein ZRP-1 mRNA, complete cds. /FEA=mRNA /PROD=ZRP-1 /DB_XREF=gi:2232135 /UG=Hs.119498 thyroid hormone receptor interactor 6 /FL=gb:BC002680.1 gb:BC004249.1 gb:BC004999.1 gb:AF000974.1 </td> <td> AF000974 </td> <td> thyroid hormone receptor interactor 6 </td> <td> TRIP6 </td> <td> 7205 </td> <td> NM_003302 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0008588 // release of cytoplasmic sequestered NF-kappaB // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0048041 // focal adhesion assembly // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0045323 // interleukin-1 receptor complex // inferred from direct assay </td> <td> 0005149 // interleukin-1 receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // non-traceable author statement </td> <td> 58.10 </td> <td> 209.50 </td> <td> 3.21 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208695_s_at </td> <td> 208695_s_at </td> <td> BC001019 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001019.1 /DEF=Homo sapiens, ribosomal protein L39, clone MGC:1636, mRNA, complete cds.  /FEA=mRNA /PROD=ribosomal protein L39 /DB_XREF=gi:12654388 /UG=Hs.300141 ribosomal protein L39 /FL=gb:BC001019.1 gb:U57846.1 </td> <td> BC001019 </td> <td> ribosomal protein L39 </td> <td> RPL39 </td> <td> 6170 </td> <td> NM_001000 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0002227 // innate immune response in mucosa // inferred from direct assay /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0019731 // antibacterial humoral response // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050830 // defense response to Gram-positive bacterium // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement </td> <td> -716.08 </td> <td> 3469.84 </td> <td> -3.21 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 213282_at </td> <td> 213282_at </td> <td> BE501952 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE501952 /FEA=EST /DB_XREF=gi:9704360 /DB_XREF=est:hw37d02.x1 /CLONE=IMAGE:3185091 /UG=Hs.5181 proliferation-associated 2G4, 38kD </td> <td> BE501952 </td> <td> apolipoprotein O-like </td> <td> APOOL </td> <td> 139322 </td> <td> NM_198450 /// XM_005262080 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 44.85 </td> <td> 79.45 </td> <td> 3.21 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200027_at </td> <td> 200027_at </td> <td> NM_004539 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004539.2 /DEF=Homo sapiens asparaginyl-tRNA synthetase (NARS), mRNA. /FEA=mRNA /GEN=NARS /PROD=asparaginyl-tRNA synthetase /DB_XREF=gi:7262387 /UG=Hs.181311 asparaginyl-tRNA synthetase /FL=gb:BC001687.1 gb:D84273.1 gb:NM_004539.2 </td> <td> NM_004539 </td> <td> asparaginyl-tRNA synthetase </td> <td> NARS </td> <td> 4677 </td> <td> NM_004539 /// XM_005266700 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006421 // asparaginyl-tRNA aminoacylation // inferred from electronic annotation /// 0006422 // aspartyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004815 // aspartate-tRNA ligase activity // inferred from electronic annotation /// 0004816 // asparagine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -99.17 </td> <td> 735.44 </td> <td> -3.21 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200633_at </td> <td> 200633_at </td> <td> NM_018955 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018955.1 /DEF=Homo sapiens ubiquitin B (UBB), mRNA. /FEA=mRNA /GEN=UBB /PROD=ubiquitin B /DB_XREF=gi:11024713 /UG=Hs.183842 ubiquitin B /FL=gb:NM_018955.1 gb:BC000379.1 </td> <td> NM_018955 </td> <td> ubiquitin B </td> <td> UBB </td> <td> 7314 </td> <td> NM_001281716 /// NM_001281717 /// NM_001281718 /// NM_001281719 /// NM_001281720 /// NM_018955 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005978 // glycogen biosynthetic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007144 // female meiosis I // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008585 // female gonad development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010992 // ubiquitin homeostasis // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019082 // viral protein processing // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0021888 // hypothalamus gonadotrophin-releasing hormone neuron development // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0032479 // regulation of type I interferon production // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060613 // fat pad development // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0071456 // cellular response to hypoxia // traceable author statement /// 0072520 // seminiferous tubule development // inferred from electronic annotation /// 0075733 // intracellular transport of virus // traceable author statement /// 0097009 // energy homeostasis // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0030666 // endocytic vesicle membrane // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -538.62 </td> <td> 3246.79 </td> <td> -3.21 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209012_at </td> <td> 209012_at </td> <td> AV718192 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV718192 /FEA=EST /DB_XREF=gi:10815344 /DB_XREF=est:AV718192 /CLONE=FHTAABE08 /UG=Hs.171957 triple functional domain (PTPRF interacting) /FL=gb:AF091395.1 </td> <td> AV718192 </td> <td> trio Rho guanine nucleotide exchange factor </td> <td> TRIO </td> <td> 7204 </td> <td> NM_007118 /// XM_006714495 /// XR_241714 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043087 // regulation of GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation </td> <td> -161.12 </td> <td> 229.86 </td> <td> -3.21 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218543_s_at </td> <td> 218543_s_at </td> <td> NM_022750 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022750.1 /DEF=Homo sapiens hypothetical protein FLJ22693 (FLJ22693), mRNA. /FEA=mRNA /GEN=FLJ22693 /PROD=hypothetical protein FLJ22693 /DB_XREF=gi:12232412 /UG=Hs.12646 hypothetical protein FLJ22693 /FL=gb:AL136766.1 gb:NM_022750.1 </td> <td> NM_022750 </td> <td> poly (ADP-ribose) polymerase family, member 12 </td> <td> PARP12 </td> <td> 64761 </td> <td> NM_022750 /// XM_005250038 /// XM_005250039 /// XM_005250040 /// XR_242188 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -47.87 </td> <td> 195.24 </td> <td> -3.21 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 205202_at </td> <td> 205202_at </td> <td> NM_005389 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005389.1 /DEF=Homo sapiens protein-L-isoaspartate (D-aspartate) O-methyltransferase (PCMT1), mRNA.  /FEA=mRNA /GEN=PCMT1 /PROD=protein-L-isoaspartate (D-aspartate)O-methyltransferase /DB_XREF=gi:4885538 /UG=Hs.79137 protein-L-isoaspartate (D-aspartate) O-methyltransferase /FL=gb:D25545.1 gb:NM_005389.1 </td> <td> NM_005389 </td> <td> protein-L-isoaspartate (D-aspartate) O-methyltransferase </td> <td> PCMT1 </td> <td> 5110 </td> <td> NM_001252049 /// NM_001252050 /// NM_001252051 /// NM_001252052 /// NM_001252053 /// NM_005389 </td> <td> 0006464 // cellular protein modification process // inferred from electronic annotation /// 0006479 // protein methylation // traceable author statement /// 0030091 // protein repair // traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0046498 // S-adenosylhomocysteine metabolic process // inferred from electronic annotation /// 0046500 // S-adenosylmethionine metabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004719 // protein-L-isoaspartate (D-aspartate) O-methyltransferase activity // traceable author statement /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 44.98 </td> <td> 169.11 </td> <td> 3.21 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200809_x_at </td> <td> 200809_x_at </td> <td> NM_000976 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000976.1 /DEF=Homo sapiens ribosomal protein L12 (RPL12), mRNA. /FEA=mRNA /GEN=RPL12 /PROD=ribosomal protein L12 /DB_XREF=gi:4506596 /UG=Hs.182979 ribosomal protein L12 /FL=gb:L06505.1 gb:NM_000976.1 </td> <td> NM_000976 </td> <td> ribosomal protein L12 </td> <td> RPL12 </td> <td> 6136 </td> <td> NM_000976 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -509.30 </td> <td> 2684.03 </td> <td> -3.21 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209623_at </td> <td> 209623_at </td> <td> AW439494 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW439494 /FEA=EST /DB_XREF=gi:6974800 /DB_XREF=est:xt19c01.x1 /CLONE=IMAGE:2779584 /UG=Hs.167531 methylcrotonoyl-Coenzyme A carboxylase 2 (beta) /FL=gb:AB050049.1 gb:AF310971.1 gb:AF301000.1 gb:NM_022132.2 </td> <td> AW439494 </td> <td> methylcrotonoyl-CoA carboxylase 2 (beta) </td> <td> MCCC2 </td> <td> 64087 </td> <td> NM_022132 /// XM_005248567 </td> <td> 0006552 // leucine catabolic process // inferred from electronic annotation /// 0006552 // leucine catabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006768 // biotin metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009083 // branched-chain amino acid catabolic process // traceable author statement /// 0015936 // coenzyme A metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004485 // methylcrotonoyl-CoA carboxylase activity // inferred from direct assay /// 0004485 // methylcrotonoyl-CoA carboxylase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> 28.48 </td> <td> 164.46 </td> <td> 3.20 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 222258_s_at </td> <td> 222258_s_at </td> <td> AF015043 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF015043.1 /DEF=Homo sapiens EH-binding protein mRNA, partial cds. /FEA=mRNA /PROD=EH-binding protein /DB_XREF=gi:4102710 /UG=Hs.17667 SH3-domain binding protein 4 </td> <td> AF015043 </td> <td> SH3-domain binding protein 4 </td> <td> SH3BP4 </td> <td> 23677 </td> <td> NM_014521 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0010508 // positive regulation of autophagy // inferred from mutant phenotype /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0032007 // negative regulation of TOR signaling // inferred from mutant phenotype /// 0034260 // negative regulation of GTPase activity // inferred from direct assay /// 0043090 // amino acid import // inferred from mutant phenotype /// 0050790 // regulation of catalytic activity // inferred from mutant phenotype /// 0061462 // protein localization to lysosome // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005092 // GDP-dissociation inhibitor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0017016 // Ras GTPase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 113.45 </td> <td> 362.07 </td> <td> 3.20 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208692_at </td> <td> 208692_at </td> <td> U14990 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U14990.1 /DEF=Human XP1PO ribosomal protein S3 (rpS3) mRNA, complete cds. /FEA=mRNA /GEN=rpS3 /PROD=ribosomal protein S3 /DB_XREF=gi:555940 /UG=Hs.252259 ribosomal protein S3 /FL=gb:BC003137.1 gb:NM_001005.1 gb:U14990.1 gb:U14991.1 gb:U14992.1 </td> <td> U14990 </td> <td> ribosomal protein S3 </td> <td> RPS3 </td> <td> 6188 </td> <td> NM_001005 /// NM_001256802 /// NM_001260506 /// NM_001260507 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000737 // DNA catabolic process, endonucleolytic // inferred from direct assay /// 0002181 // cytoplasmic translation // not recorded /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // non-traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045738 // negative regulation of DNA repair // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from mutant phenotype /// 1900119 // positive regulation of execution phase of apoptosis // inferred from direct assay /// 1902546 // positive regulation of DNA N-glycosylase activity // inferred from direct assay /// 2001235 // positive regulation of apoptotic signaling pathway // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0032587 // ruffle membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071159 // NF-kappaB complex // inferred from direct assay </td> <td> 0003684 // damaged DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity // inferred from direct assay /// 0004519 // endonuclease activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051018 // protein kinase A binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from physical interaction /// 0051536 // iron-sulfur cluster binding // non-traceable author statement </td> <td> -738.30 </td> <td> 3553.95 </td> <td> -3.20 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 204812_at </td> <td> 204812_at </td> <td> NM_004724 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004724.1 /DEF=Homo sapiens ZW10 (Drosophila) homolog, centromerekinetochore protein (ZW10), mRNA.  /FEA=mRNA /GEN=ZW10 /PROD=ZW10 (Drosophila) homolog,centromerekinetochore protein /DB_XREF=gi:4759343 /UG=Hs.13512 ZW10 (Drosophila) homolog, centromerekinetochore protein /FL=gb:U54996.1 gb:NM_004724.1 </td> <td> NM_004724 </td> <td> zw10 kinetochore protein </td> <td> ZW10 </td> <td> 9183 </td> <td> NM_004724 /// XM_006718943 </td> <td> 0000070 // mitotic sister chromatid segregation // inferred from direct assay /// 0000132 // establishment of mitotic spindle orientation // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0006461 // protein complex assembly // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007080 // mitotic metaphase plate congression // inferred from mutant phenotype /// 0007093 // mitotic cell cycle checkpoint // inferred from direct assay /// 0007096 // regulation of exit from mitosis // inferred from direct assay /// 0007126 // meiotic nuclear division // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0034501 // protein localization to kinetochore // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000922 // spindle pole // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005828 // kinetochore microtubule // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019237 // centromeric DNA binding // traceable author statement </td> <td> 45.07 </td> <td> 235.96 </td> <td> 3.20 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208702_x_at </td> <td> 208702_x_at </td> <td> AI525212 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI525212 /FEA=EST /DB_XREF=gi:4439347 /DB_XREF=est:pt1.1-2.A08.r /UG=Hs.279518 amyloid beta (A4) precursor-like protein 2 /FL=gb:BC000373.1 </td> <td> AI525212 </td> <td> amyloid beta (A4) precursor-like protein 2 </td> <td> APLP2 </td> <td> 334 </td> <td> NM_001142276 /// NM_001142277 /// NM_001142278 /// NM_001243299 /// NM_001642 /// NR_024515 /// NR_024516 </td> <td> 0001967 // suckling behavior // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046914 // transition metal ion binding // inferred from electronic annotation </td> <td> -218.47 </td> <td> 1031.79 </td> <td> -3.20 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 211662_s_at </td> <td> 211662_s_at </td> <td> L08666 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L08666.1 /DEF=Homo sapiens porin (por) mRNA, complete cds and truncated cds. /FEA=mRNA /GEN=por; por /PROD=porin; porin /DB_XREF=gi:190199 /FL=gb:L08666.1 </td> <td> L08666 </td> <td> voltage-dependent anion channel 2 </td> <td> VDAC2 </td> <td> 7417 </td> <td> NM_001184783 /// NM_001184823 /// NM_003375 /// NR_033675 /// XM_006717961 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0032272 // negative regulation of protein polymerization // inferred from electronic annotation /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0046930 // pore complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008308 // voltage-gated anion channel activity // traceable author statement /// 0015288 // porin activity // inferred from electronic annotation </td> <td> -171.33 </td> <td> 1141.46 </td> <td> -3.20 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208620_at </td> <td> 208620_at </td> <td> U24223 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U24223.1 /DEF=Human alpha-CP1 mRNA, complete cds. /FEA=mRNA /GEN=alpha-CP1 /PROD=alpha-CP1 /DB_XREF=gi:1215670 /UG=Hs.2853 poly(rC)-binding protein 1 /FL=gb:U24223.1 gb:NM_006196.1 </td> <td> U24223 </td> <td> poly(rC) binding protein 1 </td> <td> PCBP1 </td> <td> 5093 </td> <td> NM_006196 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016071 // mRNA metabolic process // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -135.30 </td> <td> 1008.30 </td> <td> -3.20 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 210026_s_at </td> <td> 210026_s_at </td> <td> AY028896 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AY028896.1 /DEF=Homo sapiens caspase recruitment domain protein 10 mRNA, complete cds.  /FEA=mRNA /PROD=caspase recruitment domain protein 10 /DB_XREF=gi:13488606 /UG=Hs.57973 hypothetical protein /FL=gb:AY028896.1 </td> <td> AY028896 </td> <td> caspase recruitment domain family, member 10 </td> <td> CARD10 </td> <td> 29775 </td> <td> NM_014550 </td> <td> 0006461 // protein complex assembly // non-traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0032449 // CBM complex // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement </td> <td> 42.93 </td> <td> 110.84 </td> <td> 3.20 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 207614_s_at </td> <td> 207614_s_at </td> <td> NM_003592 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003592.1 /DEF=Homo sapiens cullin 1 (CUL1), mRNA. /FEA=mRNA /GEN=CUL1 /PROD=cullin 1 /DB_XREF=gi:4503160 /UG=Hs.14541 cullin 1 /FL=gb:U58087.1 gb:NM_003592.1 </td> <td> NM_003592 </td> <td> cullin 1 </td> <td> CUL1 </td> <td> 8454 </td> <td> NM_003592 /// XM_005250060 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006513 // protein monoubiquitination // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0019005 // SCF ubiquitin ligase complex // inferred from sequence or structural similarity /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation </td> <td> -33.28 </td> <td> 215.91 </td> <td> -3.20 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 222011_s_at </td> <td> 222011_s_at </td> <td> BF224073 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF224073 /FEA=EST /DB_XREF=gi:11131299 /DB_XREF=est:7q83e05.x1 /CLONE=IMAGE:3704936 /UG=Hs.278544 acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase) </td> <td> BF224073 </td> <td> small nucleolar RNA, H/ACA box 29 /// t-complex 1 </td> <td> SNORA29 /// TCP1 </td> <td> 6950 /// 677812 </td> <td> NM_001008897 /// NM_030752 /// NR_002965 </td> <td> 0006457 // protein folding // traceable author statement /// 0007021 // tubulin complex assembly // non-traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0000242 // pericentriolar material // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0002199 // zona pellucida receptor complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 32.58 </td> <td> 119.09 </td> <td> 3.20 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201217_x_at </td> <td> 201217_x_at </td> <td> NM_000967 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000967.1 /DEF=Homo sapiens ribosomal protein L3 (RPL3), mRNA. /FEA=mRNA /GEN=RPL3 /PROD=ribosomal protein L3 /DB_XREF=gi:4506648 /UG=Hs.119598 ribosomal protein L3 /FL=gb:BC002408.1 gb:BC004323.1 gb:NM_000967.1 </td> <td> NM_000967 </td> <td> RNA, U86 small nucleolar /// ribosomal protein L3 /// small nucleolar RNA, C/D box 83B </td> <td> RNU86 /// RPL3 /// SNORD83B </td> <td> 6122 /// 116936 /// 116938 </td> <td> NM_000967 /// NM_001033853 /// NR_000026 /// NR_000028 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1152.55 </td> <td> 4088.12 </td> <td> -3.20 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 216484_x_at </td> <td> 216484_x_at </td> <td> L24521 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:L24521.1 /DEF=Human transformation-related protein mRNA, 3 end. /FEA=mRNA /PROD=transformation-related protein /DB_XREF=gi:403459 /UG=Hs.300705 Human transformation-related protein mRNA, 3 end </td> <td> L24521 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -105.00 </td> <td> 406.68 </td> <td> -3.19 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 213890_x_at </td> <td> 213890_x_at </td> <td> AI200589 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI200589 /FEA=EST /DB_XREF=gi:3753195 /DB_XREF=est:qf99c03.x1 /CLONE=IMAGE:1758148 /UG=Hs.80617 ribosomal protein S16 </td> <td> AI200589 </td> <td> ribosomal protein S16 </td> <td> RPS16 </td> <td> 6217 </td> <td> NM_001020 /// XM_005259137 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -597.45 </td> <td> 2902.85 </td> <td> -3.19 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 221216_s_at </td> <td> 221216_s_at </td> <td> NM_012236 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012236.1 /DEF=Homo sapiens sex comb on midleg homolog 1 (SCMH1), mRNA. /FEA=mRNA /GEN=SCMH1 /PROD=sex comb on midleg homolog 1 /DB_XREF=gi:6912641 /UG=Hs.57475 sex comb on midleg homolog 1 /FL=gb:AF149045.1 gb:NM_012236.1 </td> <td> NM_012236 </td> <td> sex comb on midleg homolog 1 (Drosophila) </td> <td> SCMH1 </td> <td> 22955 </td> <td> NM_001031694 /// NM_001172218 /// NM_001172219 /// NM_001172220 /// NM_001172221 /// NM_001172222 /// NM_012236 /// XM_005270639 /// XM_006710462 /// XM_006710463 /// XM_006710464 /// XM_006710465 /// XM_006710466 /// XM_006710467 /// XM_006710468 /// XM_006710469 /// XM_006710470 /// XR_426594 /// XR_426595 </td> <td> 0006338 // chromatin remodeling // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016458 // gene silencing // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred by curator /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0005634 // nucleus // inferred by curator /// 0005654 // nucleoplasm // traceable author statement /// 0010369 // chromocenter // inferred from electronic annotation </td> <td> 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 36.35 </td> <td> 97.60 </td> <td> 3.19 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218580_x_at </td> <td> 218580_x_at </td> <td> NM_017900 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017900.1 /DEF=Homo sapiens hypothetical protein FLJ20608 (FLJ20608), mRNA. /FEA=mRNA /GEN=FLJ20608 /PROD=hypothetical protein FLJ20608 /DB_XREF=gi:8923564 /UG=Hs.76239 hypothetical protein FLJ20608 /FL=gb:NM_017900.1 </td> <td> NM_017900 </td> <td> aurora kinase A interacting protein 1 </td> <td> AURKAIP1 </td> <td> 54998 </td> <td> NM_001127229 /// NM_001127230 /// NM_017900 </td> <td> 0045839 // negative regulation of mitosis // non-traceable author statement /// 0045862 // positive regulation of proteolysis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 63.50 </td> <td> 320.45 </td> <td> 3.19 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209610_s_at </td> <td> 209610_s_at </td> <td> BF340083 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF340083 /FEA=EST /DB_XREF=gi:11286545 /DB_XREF=est:602037236F1 /CLONE=IMAGE:4185248 /UG=Hs.323878 solute carrier family 1 (glutamateneutral amino acid transporter), member 4 /FL=gb:L14595.1 gb:NM_003038.1 gb:L19444.1 gb:AB026689.1 </td> <td> BF340083 </td> <td> solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 </td> <td> SLC1A4 </td> <td> 6509 </td> <td> NM_001135581 /// NM_001193493 /// NM_003038 /// XM_006712079 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006821 // chloride transport // inferred from direct assay /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0006868 // glutamine transport // traceable author statement /// 0015808 // L-alanine transport // inferred from direct assay /// 0015811 // L-cystine transport // inferred from direct assay /// 0015824 // proline transport // inferred from direct assay /// 0015825 // L-serine transport // inferred from direct assay /// 0015826 // threonine transport // inferred from direct assay /// 0034589 // hydroxyproline transport // inferred from direct assay /// 0035249 // synaptic transmission, glutamatergic // non-traceable author statement /// 0035524 // proline transmembrane transport // inferred from direct assay /// 0050890 // cognition // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement /// 1902476 // chloride transmembrane transport // inferred from direct assay </td> <td> 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005882 // intermediate filament // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred by curator /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005254 // chloride channel activity // inferred from direct assay /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015180 // L-alanine transmembrane transporter activity // inferred from direct assay /// 0015184 // L-cystine transmembrane transporter activity // inferred from direct assay /// 0015186 // L-glutamine transmembrane transporter activity // traceable author statement /// 0015193 // L-proline transmembrane transporter activity // inferred from direct assay /// 0015194 // L-serine transmembrane transporter activity // inferred from direct assay /// 0015195 // L-threonine transmembrane transporter activity // inferred from direct assay /// 0015293 // symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation /// 0034590 // L-hydroxyproline transmembrane transporter activity // inferred from direct assay </td> <td> -59.33 </td> <td> 74.39 </td> <td> -3.19 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 205061_s_at </td> <td> 205061_s_at </td> <td> NM_005033 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005033.1 /DEF=Homo sapiens polymyositisscleroderma autoantigen 1 (75kD) (PMSCL1), mRNA.  /FEA=mRNA /GEN=PMSCL1 /PROD=polymyositisscleroderma autoantigen 1 (75kD) /DB_XREF=gi:4826921 /UG=Hs.91728 polymyositisscleroderma autoantigen 1 (75kD) /FL=gb:M58460.1 gb:NM_005033.1 </td> <td> NM_005033 </td> <td> exosome component 9 </td> <td> EXOSC9 </td> <td> 5393 </td> <td> NM_001034194 /// NM_005033 /// XR_427545 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000956 // nuclear-transcribed mRNA catabolic process // inferred from mutant phenotype /// 0006364 // rRNA processing // non-traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0071028 // nuclear mRNA surveillance // inferred from mutant phenotype /// 0071035 // nuclear polyadenylation-dependent rRNA catabolic process // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090503 // RNA phosphodiester bond hydrolysis, exonucleolytic // non-traceable author statement </td> <td> 0000176 // nuclear exosome (RNase complex) // inferred from direct assay /// 0000176 // nuclear exosome (RNase complex) // non-traceable author statement /// 0000178 // exosome (RNase complex) // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0000175 // 3'-5'-exoribonuclease activity // non-traceable author statement /// 0003723 // RNA binding // non-traceable author statement /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004532 // exoribonuclease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017091 // AU-rich element binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 70.70 </td> <td> 90.55 </td> <td> 3.19 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 217964_at </td> <td> 217964_at </td> <td> NM_017775 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017775.1 /DEF=Homo sapiens hypothetical protein FLJ20343 (FLJ20343), mRNA. /FEA=mRNA /GEN=FLJ20343 /PROD=hypothetical protein FLJ20343 /DB_XREF=gi:8923319 /UG=Hs.252692 hypothetical protein FLJ20343 /FL=gb:NM_017775.1 </td> <td> NM_017775 </td> <td> tetratricopeptide repeat domain 19 </td> <td> TTC19 </td> <td> 54902 </td> <td> NM_001271420 /// NM_017775 </td> <td> 0000910 // cytokinesis // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0034551 // mitochondrial respiratory chain complex III assembly // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 119.78 </td> <td> 274.09 </td> <td> 3.19 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212431_at </td> <td> 212431_at </td> <td> D83778 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D83778.1 /DEF=Human mRNA for KIAA0194 gene, partial cds. /FEA=mRNA /GEN=KIAA0194 /DB_XREF=gi:1228038 /UG=Hs.216958 KIAA0194 protein </td> <td> D83778 </td> <td> HMG box domain containing 3 </td> <td> HMGXB3 </td> <td> 22993 </td> <td> NM_014983 /// XM_006714765 /// XM_006714766 /// XM_006714767 </td> <td> 0016310 // phosphorylation // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0016301 // kinase activity // non-traceable author statement </td> <td> 30.90 </td> <td> 54.03 </td> <td> 3.19 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201434_at </td> <td> 201434_at </td> <td> NM_003314 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003314.1 /DEF=Homo sapiens tetratricopeptide repeat domain 1 (TTC1), mRNA. /FEA=mRNA /GEN=TTC1 /PROD=tetratricopeptide repeat domain 1 /DB_XREF=gi:4507710 /UG=Hs.7733 tetratricopeptide repeat domain 1 /FL=gb:BC000942.1 gb:U46570.1 gb:NM_003314.1 </td> <td> NM_003314 </td> <td> tetratricopeptide repeat domain 1 </td> <td> TTC1 </td> <td> 7265 </td> <td> NM_001282500 /// NM_003314 </td> <td> 0006457 // protein folding // non-traceable author statement </td> <td> 0005778 // peroxisomal membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // non-traceable author statement </td> <td> 34.88 </td> <td> 127.01 </td> <td> 3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209310_s_at </td> <td> 209310_s_at </td> <td> U25804 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U25804.1 /DEF=Human Ich-2 cysteine protease mRNA, complete cds. /FEA=mRNA /PROD=Ich-2 /DB_XREF=gi:886049 /UG=Hs.74122 caspase 4, apoptosis-related cysteine protease /FL=gb:U28976.1 gb:U28977.1 gb:U28978.1 gb:NM_001225.1 gb:U25804.1 gb:U28014.1 </td> <td> U25804 </td> <td> caspase 4, apoptosis-related cysteine peptidase </td> <td> CASP4 </td> <td> 837 </td> <td> NM_001225 /// NM_033306 /// NM_033307 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // not recorded /// 0097194 // execution phase of apoptosis // not recorded </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0072557 // IPAF inflammasome complex // not recorded /// 0072559 // NLRP3 inflammasome complex // not recorded /// 0097169 // AIM2 inflammasome complex // not recorded </td> <td> 0004197 // cysteine-type endopeptidase activity // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -53.35 </td> <td> 97.60 </td> <td> -3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200942_s_at </td> <td> 200942_s_at </td> <td> NM_001537 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001537.1 /DEF=Homo sapiens heat shock factor binding protein 1 (HSBP1), mRNA. /FEA=mRNA /GEN=HSBP1 /PROD=heat shock factor binding protein 1 /DB_XREF=gi:4557646 /UG=Hs.250899 heat shock factor binding protein 1 /FL=gb:AF068754.1 gb:NM_001537.1 </td> <td> NM_001537 </td> <td> heat shock factor binding protein 1 </td> <td> HSBP1 </td> <td> 3281 </td> <td> NM_001537 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006936 // muscle contraction // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0003714 // transcription corepressor activity // traceable author statement </td> <td> 115.68 </td> <td> 420.71 </td> <td> 3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209016_s_at </td> <td> 209016_s_at </td> <td> BC002700 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002700.1 /DEF=Homo sapiens, Similar to keratin 7, clone MGC:3625, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to keratin 7 /DB_XREF=gi:12803726 /UG=Hs.23881 keratin 7 /FL=gb:BC002700.1 gb:NM_005556.1 </td> <td> BC002700 </td> <td> keratin 7 </td> <td> KRT7 </td> <td> 3855 </td> <td> NM_005556 /// XR_245927 </td> <td> 0007010 // cytoskeleton organization // non-traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0046417 // chorismate metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005882 // intermediate filament // non-traceable author statement /// 0045095 // keratin filament // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 38.80 </td> <td> 208.45 </td> <td> 3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 214440_at </td> <td> 214440_at </td> <td> NM_000662 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_000662.1 /DEF=Homo sapiens N-acetyltransferase 1 (arylamine N-acetyltransferase) (NAT1), mRNA.  /FEA=CDS /GEN=NAT1 /PROD=N-acetyltransferase 1 /DB_XREF=gi:4505334 /UG=Hs.155956 N-acetyltransferase 1 (arylamine N-acetyltransferase) /FL=gb:NM_000662.1 </td> <td> NM_000662 </td> <td> N-acetyltransferase 1 (arylamine N-acetyltransferase) </td> <td> NAT1 </td> <td> 9 </td> <td> NM_000662 /// NM_001160170 /// NM_001160171 /// NM_001160172 /// NM_001160173 /// NM_001160174 /// NM_001160175 /// NM_001160176 /// NM_001160179 /// NM_001291962 /// XM_006716410 </td> <td> 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004060 // arylamine N-acetyltransferase activity // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation </td> <td> 28.83 </td> <td> 57.76 </td> <td> 3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201365_at </td> <td> 201365_at </td> <td> NM_002537 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002537.1 /DEF=Homo sapiens ornithine decarboxylase antizyme 2 (OAZ2), mRNA. /FEA=mRNA /GEN=OAZ2 /PROD=ornithine decarboxylase antizyme 2 /DB_XREF=gi:9845506 /UG=Hs.74563 ornithine decarboxylase antizyme 2 /FL=gb:AF057297.1 gb:AF242521.1 gb:NM_002537.1 </td> <td> NM_002537 </td> <td> ornithine decarboxylase antizyme 2 </td> <td> OAZ2 </td> <td> 4947 </td> <td> NM_002537 </td> <td> 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006595 // polyamine metabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0008073 // ornithine decarboxylase inhibitor activity // inferred from electronic annotation </td> <td> 44.83 </td> <td> 186.31 </td> <td> 3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 214427_at </td> <td> 214427_at </td> <td> NM_006170 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_006170.1 /DEF=Homo sapiens nucleolar protein 1 (120kD) (NOL1), mRNA. /FEA=CDS /GEN=NOL1 /PROD=nucleolar protein 1 (120kD) /DB_XREF=gi:5453791 /UG=Hs.15243 nucleolar protein 1 (120kD) /FL=gb:BC000656.1 gb:M32110.1 gb:NM_006170.1 </td> <td> NM_006170 </td> <td> NOP2 nucleolar protein </td> <td> NOP2 </td> <td> 4839 </td> <td> NM_001033714 /// NM_001258308 /// NM_001258309 /// NM_001258310 /// NM_006170 /// XM_005253691 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0032259 // methylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 36.62 </td> <td> 173.24 </td> <td> 3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209393_s_at </td> <td> 209393_s_at </td> <td> AF047695 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF047695.1 /DEF=Homo sapiens cap-binding protein 4EHP mRNA, complete cds. /FEA=mRNA /PROD=cap-binding protein 4EHP /DB_XREF=gi:3172338 /UG=Hs.19122 eukaryotic translation initiation factor 4E-like 3 /FL=gb:BC005392.1 gb:AF047695.1 gb:AF068117.1 gb:AF038957.1 gb:NM_004846.1 </td> <td> AF047695 </td> <td> eukaryotic translation initiation factor 4E family member 2 </td> <td> EIF4E2 </td> <td> 9470 </td> <td> NM_001276336 /// NM_001276337 /// NM_001282958 /// NM_004846 /// XM_005246975 /// XR_427124 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019221 // cytokine-mediated signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from direct assay </td> <td> 0000339 // RNA cap binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 50.75 </td> <td> 198.40 </td> <td> 3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202931_x_at </td> <td> 202931_x_at </td> <td> NM_004305 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004305.1 /DEF=Homo sapiens bridging integrator 1 (BIN1), mRNA. /FEA=mRNA /GEN=BIN1 /PROD=bridging integrator 1 /DB_XREF=gi:4757747 /UG=Hs.193163 bridging integrator 1 /FL=gb:U68485.1 gb:NM_004305.1 </td> <td> NM_004305 </td> <td> bridging integrator 1 </td> <td> BIN1 </td> <td> 274 </td> <td> NM_004305 /// NM_139343 /// NM_139344 /// NM_139345 /// NM_139346 /// NM_139347 /// NM_139348 /// NM_139349 /// NM_139350 /// NM_139351 /// XM_005263642 /// XM_005263643 /// XM_005263644 /// XM_005263645 /// XM_005263646 /// XM_005263647 /// XM_005263648 /// XM_006712424 /// XM_006712425 /// XM_006712426 /// XM_006712427 /// XM_006712428 /// XM_006712429 /// XM_006712430 /// XM_006712431 /// XM_006712432 /// XM_006712433 /// XM_006712434 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from mutant phenotype /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from mutant phenotype /// 0060988 // lipid tube assembly // inferred from mutant phenotype /// 0071156 // regulation of cell cycle arrest // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030315 // T-tubule // inferred from sequence or structural similarity /// 0030424 // axon // inferred from direct assay /// 0031674 // I band // inferred from sequence or structural similarity /// 0033268 // node of Ranvier // inferred from sequence or structural similarity /// 0043194 // axon initial segment // inferred from sequence or structural similarity /// 0043196 // varicosity // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0044300 // cerebellar mossy fiber // inferred from electronic annotation /// 0060987 // lipid tube // inferred from mutant phenotype </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from physical interaction /// 0051020 // GTPase binding // inferred from electronic annotation </td> <td> -40.85 </td> <td> 119.50 </td> <td> -3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212195_at </td> <td> 212195_at </td> <td> AL049265 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049265.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564F053 (from clone DKFZp564F053). /FEA=mRNA /DB_XREF=gi:4500013 /UG=Hs.71968 Homo sapiens mRNA; cDNA DKFZp564F053 (from clone DKFZp564F053) </td> <td> AL049265 </td> <td> interleukin 6 signal transducer </td> <td> IL6ST </td> <td> 3572 </td> <td> NM_001190981 /// NM_002184 /// NM_175767 /// NR_120480 /// XM_005248496 </td> <td> 0002675 // positive regulation of acute inflammatory response // inferred by curator /// 0002821 // positive regulation of adaptive immune response // inferred by curator /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008593 // regulation of Notch signaling pathway // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0034097 // response to cytokine // inferred from direct assay /// 0038154 // interleukin-11-mediated signaling pathway // inferred from electronic annotation /// 0038165 // oncostatin-M-mediated signaling pathway // inferred from mutant phenotype /// 0042102 // positive regulation of T cell proliferation // inferred from mutant phenotype /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048861 // leukemia inhibitory factor signaling pathway // inferred from genetic interaction /// 0070102 // interleukin-6-mediated signaling pathway // inferred from mutant phenotype /// 0070104 // negative regulation of interleukin-6-mediated signaling pathway // inferred from direct assay /// 0070106 // interleukin-27-mediated signaling pathway // inferred from mutant phenotype /// 0070120 // ciliary neurotrophic factor-mediated signaling pathway // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005896 // interleukin-6 receptor complex // inferred from direct assay /// 0005900 // oncostatin-M receptor complex // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070110 // ciliary neurotrophic factor receptor complex // inferred from direct assay </td> <td> 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004897 // ciliary neurotrophic factor receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from genetic interaction /// 0004921 // interleukin-11 receptor activity // inferred from electronic annotation /// 0004923 // leukemia inhibitory factor receptor activity // inferred from genetic interaction /// 0004924 // oncostatin-M receptor activity // inferred from direct assay /// 0005127 // ciliary neurotrophic factor receptor binding // inferred from physical interaction /// 0005138 // interleukin-6 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from physical interaction /// 0019970 // interleukin-11 binding // inferred from electronic annotation /// 0019981 // interleukin-6 binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // traceable author statement /// 0045509 // interleukin-27 receptor activity // inferred by curator </td> <td> -238.10 </td> <td> 1290.58 </td> <td> -3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 204526_s_at </td> <td> 204526_s_at </td> <td> NM_007063 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007063.1 /DEF=Homo sapiens vascular Rab-GAPTBC-containing (VRP), mRNA. /FEA=mRNA /GEN=VRP /PROD=vascular Rab-GAPTBC-containing /DB_XREF=gi:5902153 /UG=Hs.164170 vascular Rab-GAPTBC-containing /FL=gb:AB024057.1 gb:NM_007063.1 </td> <td> NM_007063 </td> <td> TBC1 domain family, member 8 (with GRAM domain) </td> <td> TBC1D8 </td> <td> 11138 </td> <td> NM_001102426 /// NM_007063 /// XM_005263862 /// XM_005263863 /// XM_005263864 </td> <td> 0008015 // blood circulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td> 0016020 // membrane // traceable author statement </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation </td> <td> 49.70 </td> <td> 191.93 </td> <td> 3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 217866_at </td> <td> 217866_at </td> <td> NM_024811 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024811.1 /DEF=Homo sapiens hypothetical protein FLJ12529 (FLJ12529), mRNA. /FEA=mRNA /GEN=FLJ12529 /PROD=hypothetical protein FLJ12529 /DB_XREF=gi:13376196 /UG=Hs.169100 hypothetical protein FLJ12529 /FL=gb:NM_024811.1 </td> <td> NM_024811 </td> <td> cleavage and polyadenylation specific factor 7, 59kDa </td> <td> CPSF7 </td> <td> 79869 </td> <td> NM_001136040 /// NM_001142565 /// NM_024811 /// XM_005274298 /// XM_005274299 /// XM_005274302 /// XM_005274303 /// XM_006718690 /// XM_006718691 /// XM_006718692 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051262 // protein tetramerization // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005849 // mRNA cleavage factor complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 60.05 </td> <td> 226.15 </td> <td> 3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218270_at </td> <td> 218270_at </td> <td> NM_024540 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024540.1 /DEF=Homo sapiens hypothetical protein FLJ20917 (FLJ20917), mRNA. /FEA=mRNA /GEN=FLJ20917 /PROD=hypothetical protein FLJ20917 /DB_XREF=gi:13375698 /UG=Hs.9265 hypothetical protein FLJ20917 /FL=gb:NM_024540.1 </td> <td> NM_024540 </td> <td> mitochondrial ribosomal protein L24 </td> <td> MRPL24 </td> <td> 79590 </td> <td> NM_024540 /// NM_145729 </td> <td> 0006412 // translation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation </td> <td> 100.27 </td> <td> 318.81 </td> <td> 3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209048_s_at </td> <td> 209048_s_at </td> <td> AB032951 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB032951.1 /DEF=Homo sapiens mRNA for KIAA1125 protein, partial cds. /FEA=mRNA /GEN=KIAA1125 /PROD=KIAA1125 protein /DB_XREF=gi:6329748 /UG=Hs.75871 protein kinase C binding protein 1 /FL=gb:BC001004.1 </td> <td> AB032951 </td> <td> zinc finger, MYND-type containing 8 </td> <td> ZMYND8 </td> <td> 23613 </td> <td> NM_001281769 /// NM_001281771 /// NM_001281772 /// NM_001281773 /// NM_001281774 /// NM_001281775 /// NM_001281776 /// NM_001281777 /// NM_001281778 /// NM_001281779 /// NM_001281780 /// NM_001281781 /// NM_001281782 /// NM_001281783 /// NM_001281784 /// NM_012408 /// NM_183047 /// NM_183048 /// XM_005260356 /// XM_005260358 /// XM_005260360 /// XM_005260361 /// XM_005260362 /// XM_005260364 /// XM_005260365 /// XM_005260366 /// XM_005260369 /// XM_005260371 /// XM_005260377 /// XM_006723760 /// XM_006723761 /// XM_006723762 /// XM_006723763 /// XM_006723764 /// XM_006723765 /// XM_006723766 /// XM_006723767 /// XM_006723768 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity </td> <td> 0001106 // RNA polymerase II transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from sequence or structural similarity </td> <td> -65.10 </td> <td> 368.05 </td> <td> -3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202291_s_at </td> <td> 202291_s_at </td> <td> NM_000900 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000900.1 /DEF=Homo sapiens matrix Gla protein (MGP), mRNA. /FEA=mRNA /GEN=MGP /PROD=matrix Gla protein /DB_XREF=gi:4505178 /UG=Hs.279009 matrix Gla protein /FL=gb:M58549.1 gb:NM_000900.1 </td> <td> NM_000900 </td> <td> matrix Gla protein </td> <td> MGP </td> <td> 4256 </td> <td> NM_000900 /// NM_001190839 </td> <td> 0001502 // cartilage condensation // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030500 // regulation of bone mineralization // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008147 // structural constituent of bone // traceable author statement </td> <td> 60.27 </td> <td> 202.84 </td> <td> 3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200032_s_at </td> <td> 200032_s_at </td> <td> NM_000661 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000661.1 /DEF=Homo sapiens ribosomal protein L9 (RPL9), mRNA. /FEA=mRNA /GEN=RPL9 /PROD=ribosomal protein L9 /DB_XREF=gi:4506664 /UG=Hs.157850 ribosomal protein L9 /FL=gb:U09953.1 gb:NM_000661.1 </td> <td> NM_000661 </td> <td> ribosomal protein L9 </td> <td> RPL9 </td> <td> 6133 </td> <td> NM_000661 /// NM_001024921 /// XM_005262661 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0047961 // glycine N-acyltransferase activity // inferred from electronic annotation </td> <td> -616.65 </td> <td> 3720.55 </td> <td> -3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 210283_x_at </td> <td> 210283_x_at </td> <td> BC005295 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005295.1 /DEF=Homo sapiens, Similar to polyadenylate binding protein-interacting protein 1, clone MGC:12360, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to polyadenylate bindingprotein-interacting protein 1 /DB_XREF=gi:13529010 /UG=Hs.109643 polyadenylate binding protein-interacting protein 1 /FL=gb:BC005295.1 </td> <td> BC005295 </td> <td> poly(A) binding protein interacting protein 1 </td> <td> PAIP1 </td> <td> 10605 </td> <td> NM_006451 /// NM_182789 /// NM_183323 /// XM_005248230 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from direct assay /// 0048255 // mRNA stabilization // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from direct assay </td> <td> -59.85 </td> <td> 305.88 </td> <td> -3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209898_x_at </td> <td> 209898_x_at </td> <td> U61167 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U61167.1 /DEF=Human SH3 domain-containing protein SH3P18 mRNA, complete cds. /FEA=mRNA /PROD=SH3 domain-containing protein SH3P18 /DB_XREF=gi:1438934 /UG=Hs.330549 Human SH3 domain-containing protein SH3P18 mRNA, complete cds /FL=gb:U61167.1 </td> <td> U61167 </td> <td> intersectin 2 </td> <td> ITSN2 </td> <td> 50618 </td> <td> NM_006277 /// NM_019595 /// NM_147152 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -43.43 </td> <td> 117.91 </td> <td> -3.18 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203690_at </td> <td> 203690_at </td> <td> NM_006322 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006322.1 /DEF=Homo sapiens spindle pole body protein (GCP3), mRNA. /FEA=mRNA /GEN=GCP3 /PROD=spindle pole body protein /DB_XREF=gi:5453659 /UG=Hs.9884 spindle pole body protein /FL=gb:AF042378.1 gb:NM_006322.1 </td> <td> NM_006322 </td> <td> tubulin, gamma complex associated protein 3 </td> <td> TUBGCP3 </td> <td> 10426 </td> <td> NM_001286277 /// NM_001286278 /// NM_001286279 /// NM_006322 /// XM_005268293 /// XR_245841 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // non-traceable author statement /// 0007338 // single fertilization // non-traceable author statement </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // non-traceable author statement /// 0005814 // centriole // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // non-traceable author statement /// 0005827 // polar microtubule // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0005198 // structural molecule activity // non-traceable author statement /// 0005200 // structural constituent of cytoskeleton // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from direct assay </td> <td> 48.70 </td> <td> 95.83 </td> <td> 3.17 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208790_s_at </td> <td> 208790_s_at </td> <td> AF312393 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF312393.1 /DEF=Homo sapiens leucine-zipper protein FKSG13 (FKSG13) mRNA, complete cds.  /FEA=mRNA /GEN=FKSG13 /PROD=leucine-zipper protein FKSG13 /DB_XREF=gi:11034808 /UG=Hs.29759 RNA POLYMERASE I AND TRANSCRIPT RELEASE FACTOR /FL=gb:AF312393.1 </td> <td> AF312393 </td> <td> polymerase I and transcript release factor </td> <td> PTRF </td> <td> 284119 </td> <td> NM_012232 /// XM_005257242 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006353 // DNA-templated transcription, termination // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // inferred from direct assay /// 0006363 // termination of RNA polymerase I transcription // inferred from direct assay /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005901 // caveola // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding // inferred from electronic annotation /// 0042134 // rRNA primary transcript binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 77.50 </td> <td> 204.83 </td> <td> 3.17 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 217987_at </td> <td> 217987_at </td> <td> NM_019048 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019048.1 /DEF=Homo sapiens hypothetical protein (FLJ20752), mRNA. /FEA=mRNA /GEN=FLJ20752 /PROD=hypothetical protein /DB_XREF=gi:9506696 /UG=Hs.101364 hypothetical protein /FL=gb:BC001243.1 gb:NM_019048.1 </td> <td> NM_019048 </td> <td> asparagine synthetase domain containing 1 </td> <td> ASNSD1 </td> <td> 54529 </td> <td> NM_019048 /// XM_005246653 </td> <td> 0006529 // asparagine biosynthetic process // inferred from electronic annotation /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation </td> <td>  </td> <td> 0004066 // asparagine synthase (glutamine-hydrolyzing) activity // inferred from electronic annotation </td> <td> 55.03 </td> <td> 205.46 </td> <td> 3.17 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200714_x_at </td> <td> 200714_x_at </td> <td> NM_006812 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006812.1 /DEF=Homo sapiens amplified in osteosarcoma (OS-9), mRNA. /FEA=mRNA /GEN=OS-9 /PROD=amplified in osteosarcoma /DB_XREF=gi:5803108 /UG=Hs.76228 amplified in osteosarcoma /FL=gb:U41635.1 gb:AB002806.1 gb:NM_006812.1 </td> <td> NM_006812 </td> <td> osteosarcoma amplified 9, endoplasmic reticulum lectin </td> <td> OS9 </td> <td> 10956 </td> <td> NM_001017956 /// NM_001017957 /// NM_001017958 /// NM_001261420 /// NM_001261421 /// NM_001261422 /// NM_001261423 /// NM_006812 /// XM_005268581 /// XM_006719200 /// XM_006719201 </td> <td> 0006605 // protein targeting // inferred from electronic annotation /// 0006621 // protein retention in ER lumen // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from mutant phenotype </td> <td> 0000836 // Hrd1p ubiquitin ligase complex // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay </td> <td> 0001948 // glycoprotein binding // inferred from direct assay /// 0002020 // protease binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -157.80 </td> <td> 728.62 </td> <td> -3.17 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209077_at </td> <td> 209077_at </td> <td> AL022313 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL022313 /DEF=Human DNA sequence from clone RP5-1119A7 on chromosome 22q12.2-12.3 Contains the TXN2 gene for mitochondrial thioredoxin, a novel gene, the EIF3S7 gene for eukaryotic translation initiation factor 3 subunit 7 (zeta, 6667kD) (EIF3-P66), the gene f... /FEA=mRNA_4 /DB_XREF=gi:4200326 /UG=Hs.211929 thioredoxin, mitochondrial /FL=gb:U78678.1 gb:NM_012473.1 gb:AF276920.1 </td> <td> AL022313 </td> <td> thioredoxin 2 </td> <td> TXN2 </td> <td> 25828 </td> <td> NM_012473 /// XM_005261508 /// XM_006724226 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0009725 // response to hormone // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0031669 // cellular response to nutrient levels // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> 39.60 </td> <td> 136.65 </td> <td> 3.17 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 213236_at </td> <td> 213236_at </td> <td> AK025495 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK025495.1 /DEF=Homo sapiens cDNA: FLJ21842 fis, clone HEP01849. /FEA=mRNA /DB_XREF=gi:10438030 /UG=Hs.12002 KIAA0790 protein </td> <td> AK025495 </td> <td> SAM and SH3 domain containing 1 </td> <td> SASH1 </td> <td> 23328 </td> <td> NM_015278 /// XM_005266874 /// XM_005266875 /// XM_006715406 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0031666 // positive regulation of lipopolysaccharide-mediated signaling pathway // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 1900044 // regulation of protein K63-linked ubiquitination // inferred from direct assay /// 1900745 // positive regulation of p38MAPK cascade // inferred from mutant phenotype /// 1901224 // positive regulation of NIK/NF-kappaB signaling // inferred from mutant phenotype /// 1902498 // regulation of protein autoubiquitination // inferred from direct assay </td> <td> 0043234 // protein complex // inferred from mutant phenotype </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from direct assay /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from direct assay /// 0032947 // protein complex scaffold // inferred from direct assay </td> <td> 80.98 </td> <td> 342.89 </td> <td> 3.17 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201942_s_at </td> <td> 201942_s_at </td> <td> D85390 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D85390.1 /DEF=Homo sapiens mRNA for gp180-carboxypeptidase D-like enzyme, complete cds.  /FEA=mRNA /PROD=gp180-carboxypeptidase D-like enzyme /DB_XREF=gi:3641620 /UG=Hs.5057 carboxypeptidase D /FL=gb:U65090.1 gb:D85390.1 gb:NM_001304.2 </td> <td> D85390 </td> <td> carboxypeptidase D </td> <td> CPD </td> <td> 1362 </td> <td> NM_001199775 /// NM_001304 </td> <td> 0006508 // proteolysis // inferred from electronic annotation </td> <td> 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0004185 // serine-type carboxypeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -57.35 </td> <td> 105.45 </td> <td> -3.17 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202985_s_at </td> <td> 202985_s_at </td> <td> NM_004873 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004873.1 /DEF=Homo sapiens BCL2-associated athanogene 5 (BAG5), mRNA. /FEA=mRNA /GEN=BAG5 /PROD=BCL2-associated athanogene 5 /DB_XREF=gi:6631076 /UG=Hs.5443 BCL2-associated athanogene 5 /FL=gb:AF095195.2 gb:NM_004873.1 </td> <td> NM_004873 </td> <td> BCL2-associated athanogene 5 </td> <td> BAG5 </td> <td> 9529 </td> <td> NM_001015048 /// NM_001015049 /// NM_004873 </td> <td> 0006457 // protein folding // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0051444 // negative regulation of ubiquitin-protein transferase activity // inferred from sequence or structural similarity /// 0061084 // negative regulation of protein refolding // inferred from sequence or structural similarity /// 0070997 // neuron death // inferred from sequence or structural similarity /// 0090083 // regulation of inclusion body assembly // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0031625 // ubiquitin protein ligase binding // inferred from sequence or structural similarity /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> 75.88 </td> <td> 247.76 </td> <td> 3.17 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 219993_at </td> <td> 219993_at </td> <td> NM_022454 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022454.1 /DEF=Homo sapiens hypothetical protein FLJ22252 similar to SRY-box containing gene 17 (FLJ22252), mRNA.  /FEA=mRNA /GEN=FLJ22252 /PROD=hypothetical protein FLJ22252 similar to SRY-boxcontaining gene 17 /DB_XREF=gi:11967990 /UG=Hs.97984 hypothetical protein FLJ22252 similar to SRY-box containing gene 17 /FL=gb:NM_022454.1 </td> <td> NM_022454 </td> <td> SRY (sex determining region Y)-box 17 </td> <td> SOX17 </td> <td> 64321 </td> <td> NM_022454 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001706 // endoderm formation // inferred from direct assay /// 0001828 // inner cell mass cellular morphogenesis // inferred from electronic annotation /// 0001947 // heart looping // inferred from sequence or structural similarity /// 0003142 // cardiogenic plate morphogenesis // inferred from sequence or structural similarity /// 0003143 // embryonic heart tube morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003308 // negative regulation of Wnt signaling pathway involved in heart development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007493 // endodermal cell fate determination // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0021903 // rostrocaudal neural tube patterning // inferred from electronic annotation /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0031648 // protein destabilization // inferred from mutant phenotype /// 0035050 // embryonic heart tube development // inferred from sequence or structural similarity /// 0042074 // cell migration involved in gastrulation // inferred from electronic annotation /// 0042661 // regulation of mesodermal cell fate specification // inferred from electronic annotation /// 0042662 // negative regulation of mesodermal cell fate specification // inferred from electronic annotation /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from direct assay /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045995 // regulation of embryonic development // inferred from sequence or structural similarity /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048617 // embryonic foregut morphogenesis // inferred from sequence or structural similarity /// 0048643 // positive regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0048863 // stem cell differentiation // inferred from electronic annotation /// 0048866 // stem cell fate specification // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0060070 // canonical Wnt signaling pathway // inferred from electronic annotation /// 0060214 // endocardium formation // inferred from sequence or structural similarity /// 0060807 // regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification // inferred from sequence or structural similarity /// 0060913 // cardiac cell fate determination // inferred from mutant phenotype /// 0060914 // heart formation // traceable author statement /// 0060956 // endocardial cell differentiation // inferred from sequence or structural similarity /// 0061009 // common bile duct development // inferred from electronic annotation /// 0061010 // gall bladder development // inferred from electronic annotation /// 0061031 // endodermal digestive tract morphogenesis // inferred from sequence or structural similarity /// 0072001 // renal system development // inferred from mutant phenotype /// 0072091 // regulation of stem cell proliferation // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 2000035 // regulation of stem cell division // inferred from electronic annotation /// 2000043 // regulation of cardiac cell fate specification // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity </td> <td> -80.45 </td> <td> 335.35 </td> <td> -3.17 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201937_s_at </td> <td> 201937_s_at </td> <td> NM_012100 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012100.1 /DEF=Homo sapiens aspartyl aminopeptidase (DNPEP), mRNA. /FEA=mRNA /GEN=DNPEP /PROD=aspartyl aminopeptidase /DB_XREF=gi:6912247 /UG=Hs.258551 aspartyl aminopeptidase /FL=gb:BC000653.1 gb:AF005050.2 gb:NM_012100.1 </td> <td> NM_012100 </td> <td> aspartyl aminopeptidase </td> <td> DNPEP </td> <td> 23549 </td> <td> NM_012100 /// XM_005246430 /// XM_005246431 /// XM_005246432 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006518 // peptide metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0004177 // aminopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -36.23 </td> <td> 70.24 </td> <td> -3.17 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 204980_at </td> <td> 204980_at </td> <td> NM_004898 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004898.1 /DEF=Homo sapiens clock (mouse) homolog (CLOCK), mRNA. /FEA=mRNA /GEN=CLOCK /PROD=clock (mouse) homolog /DB_XREF=gi:4758009 /UG=Hs.50722 clock (mouse) homolog /FL=gb:AB002332.1 gb:AF011568.1 gb:NM_004898.1 </td> <td> NM_004898 </td> <td> clock circadian regulator </td> <td> CLOCK </td> <td> 9575 </td> <td> NM_001267843 /// NM_004898 /// XM_005265787 /// XM_006714054 </td> <td> 0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007623 // circadian rhythm // traceable author statement /// 0009648 // photoperiodism // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from mutant phenotype /// 0032922 // circadian regulation of gene expression // inferred from direct assay /// 0032922 // circadian regulation of gene expression // inferred from mutant phenotype /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0042634 // regulation of hair cycle // inferred from mutant phenotype /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048511 // rhythmic process // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0051775 // response to redox state // inferred from direct assay /// 0071479 // cellular response to ionizing radiation // inferred from direct assay /// 2000074 // regulation of type B pancreatic cell development // inferred from sequence or structural similarity /// 2000323 // negative regulation of glucocorticoid receptor signaling pathway // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from physical interaction /// 0005694 // chromosome // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0033391 // chromatoid body // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000982 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0001047 // core promoter binding // inferred from sequence or structural similarity /// 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0004402 // histone acetyltransferase activity // inferred from mutant phenotype /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0031490 // chromatin DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from direct assay </td> <td> 46.52 </td> <td> 134.74 </td> <td> 3.17 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203934_at </td> <td> 203934_at </td> <td> NM_002253 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002253.1 /DEF=Homo sapiens kinase insert domain receptor (a type III receptor tyrosine kinase) (KDR), mRNA.  /FEA=mRNA /GEN=KDR /PROD=kinase insert domain receptor (a type IIIreceptor tyrosine kinase) /DB_XREF=gi:11321596 /UG=Hs.12337 kinase insert domain receptor (a type III receptor tyrosine kinase) /FL=gb:NM_002253.1 gb:AF035121.1 gb:AF063658.1 </td> <td> NM_002253 </td> <td> kinase insert domain receptor (a type III receptor tyrosine kinase) </td> <td> KDR </td> <td> 3791 </td> <td> NM_002253 </td> <td> 0001525 // angiogenesis // traceable author statement /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0003158 // endothelium development // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // traceable author statement /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0035162 // embryonic hemopoiesis // inferred from sequence or structural similarity /// 0035584 // calcium-mediated signaling using intracellular calcium source // inferred from mutant phenotype /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0038083 // peptidyl-tyrosine autophosphorylation // inferred from sequence or structural similarity /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043129 // surfactant homeostasis // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045446 // endothelial cell differentiation // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050927 // positive regulation of positive chemotaxis // inferred from direct assay /// 0051770 // positive regulation of nitric-oxide synthase biosynthetic process // inferred from direct assay /// 0051770 // positive regulation of nitric-oxide synthase biosynthetic process // inferred from mutant phenotype /// 0051894 // positive regulation of focal adhesion assembly // inferred from direct assay /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from direct assay /// 2001214 // positive regulation of vasculogenesis // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005769 // early endosome // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0071944 // cell periphery // inferred from electronic annotation /// 0097443 // sorting endosome // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004716 // receptor signaling protein tyrosine kinase activity // traceable author statement /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0038085 // vascular endothelial growth factor binding // inferred from physical interaction /// 0051879 // Hsp90 protein binding // traceable author statement </td> <td> -131.45 </td> <td> 495.20 </td> <td> -3.17 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218188_s_at </td> <td> 218188_s_at </td> <td> NM_012458 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012458.1 /DEF=Homo sapiens translocase of inner mitochondrial membrane 13 (yeast) homolog B (TIMM13B), mRNA.  /FEA=mRNA /GEN=TIMM13B /PROD=translocase of inner mitochondrial membrane 13(yeast) homolog B /DB_XREF=gi:11024699 /UG=Hs.23410 translocase of inner mitochondrial membrane 13 (yeast) homolog B /FL=gb:NM_012458.1 gb:AF144700.1 gb:AF152352.1 </td> <td> NM_012458 </td> <td> translocase of inner mitochondrial membrane 13 homolog (yeast) </td> <td> TIMM13 </td> <td> 26517 </td> <td> NM_012458 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0072321 // chaperone-mediated protein transport // traceable author statement </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0042719 // mitochondrial intermembrane space protein transporter complex // traceable author statement </td> <td> 0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 79.67 </td> <td> 228.69 </td> <td> 3.16 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200674_s_at </td> <td> 200674_s_at </td> <td> NM_000994 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000994.1 /DEF=Homo sapiens ribosomal protein L32 (RPL32), mRNA. /FEA=mRNA /GEN=RPL32 /PROD=ribosomal protein L32 /DB_XREF=gi:4506634 /UG=Hs.169793 ribosomal protein L32 /FL=gb:NM_000994.1 </td> <td> NM_000994 </td> <td> ribosomal protein L32 </td> <td> RPL32 </td> <td> 6161 </td> <td> NM_000994 /// NM_001007073 /// NM_001007074 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -845.53 </td> <td> 3625.59 </td> <td> -3.16 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201541_s_at </td> <td> 201541_s_at </td> <td> NM_006349 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006349.1 /DEF=Homo sapiens putative cyclin G1 interacting protein (CG1I), mRNA. /FEA=mRNA /GEN=CG1I /PROD=putative cyclin G1 interacting protein /DB_XREF=gi:5453616 /UG=Hs.10028 putative cyclin G1 interacting protein /FL=gb:U61837.1 gb:NM_006349.1 </td> <td> NM_006349 </td> <td> zinc finger, HIT-type containing 1 </td> <td> ZNHIT1 </td> <td> 10467 </td> <td> NM_006349 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0031063 // regulation of histone deacetylation // inferred from electronic annotation /// 0042129 // regulation of T cell proliferation // inferred from electronic annotation /// 0070317 // negative regulation of G0 to G1 transition // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 60.60 </td> <td> 165.65 </td> <td> 3.16 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208694_at </td> <td> 208694_at </td> <td> U47077 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U47077.5 /DEF=Homo sapiens DNA-dependent protein kinase catalytic subunit (DNA-PKcs) mRNA, complete cds.  /FEA=mRNA /GEN=DNA-PKcs /PROD=DNA-dependent protein kinase catalytic subunit /DB_XREF=gi:13570016 /UG=Hs.155637 protein kinase, DNA-activated, catalytic polypeptide /FL=gb:U47077.5 gb:NM_006904.5 </td> <td> U47077 </td> <td> protein kinase, DNA-activated, catalytic polypeptide </td> <td> PRKDC </td> <td> 5591 </td> <td> NM_001081640 /// NM_006904 </td> <td> 0000723 // telomere maintenance // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002328 // pro-B cell differentiation // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006303 // double-strand break repair via nonhomologous end joining // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0030098 // lymphocyte differentiation // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0033153 // T cell receptor V(D)J recombination // inferred from electronic annotation /// 0035234 // ectopic germ cell programmed cell death // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048511 // rhythmic process // inferred from electronic annotation /// 0072431 // signal transduction involved in mitotic G1 DNA damage checkpoint // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005958 // DNA-dependent protein kinase-DNA ligase 4 complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070419 // nonhomologous end joining complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004677 // DNA-dependent protein kinase activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 49.27 </td> <td> 189.39 </td> <td> 3.16 </td> <td> 0.01 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203885_at </td> <td> 203885_at </td> <td> NM_014999 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014999.1 /DEF=Homo sapiens KIAA0118 protein (KIAA0118), mRNA. /FEA=mRNA /GEN=KIAA0118 /PROD=KIAA0118 protein /DB_XREF=gi:7661921 /UG=Hs.184627 KIAA0118 protein /FL=gb:AF091035.1 gb:NM_014999.1 </td> <td> NM_014999 </td> <td> RAB21, member RAS oncogene family </td> <td> RAB21 </td> <td> 23011 </td> <td> NM_014999 </td> <td> 0006184 // GTP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0019003 // GDP binding // inferred from direct assay </td> <td> -39.35 </td> <td> 152.15 </td> <td> -3.15 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201203_s_at </td> <td> 201203_s_at </td> <td> AI921320 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI921320 /FEA=EST /DB_XREF=gi:5657284 /DB_XREF=est:wo23c10.x1 /CLONE=IMAGE:2456178 /UG=Hs.98614 ribosome binding protein 1 (dog 180kD homolog) /FL=gb:AF006751.1 gb:NM_004587.1 </td> <td> AI921320 </td> <td> ribosome binding protein 1 </td> <td> RRBP1 </td> <td> 6238 </td> <td> NM_001042576 /// NM_004587 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006412 // translation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005840 // ribosome // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 37.95 </td> <td> 74.67 </td> <td> 3.15 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200077_s_at </td> <td> 200077_s_at </td> <td> D87914 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D87914.1 /DEF=Human mRNA for ornithine decarboxylase antizyme, complete cds. /FEA=mRNA /GEN=hAZ-brain /PROD=ornithine decarboxylase antizyme /DB_XREF=gi:1590807 /FL=gb:D87914.1 </td> <td> D87914 </td> <td> ornithine decarboxylase antizyme 1 </td> <td> OAZ1 </td> <td> 4946 </td> <td> NM_004152 </td> <td> 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0045732 // positive regulation of protein catabolic process // inferred from sequence or structural similarity </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0008073 // ornithine decarboxylase inhibitor activity // inferred from electronic annotation </td> <td> -200.43 </td> <td> 2071.79 </td> <td> -3.15 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 213049_at </td> <td> 213049_at </td> <td> BG436400 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG436400 /FEA=EST /DB_XREF=gi:13342906 /DB_XREF=est:602509062F1 /CLONE=IMAGE:4619679 /UG=Hs.167031 DKFZP566D133 protein </td> <td> BG436400 </td> <td> Ral GTPase activating protein, alpha subunit 1 (catalytic) </td> <td> RALGAPA1 </td> <td> 253959 </td> <td> NM_001283043 /// NM_001283044 /// NM_014990 /// NM_194301 /// XM_005267491 /// XM_005267492 /// XM_005267493 /// XM_005267498 /// XM_006720098 /// XM_006720099 /// XM_006720100 /// XM_006720101 /// XM_006720102 /// XM_006720103 /// XM_006720104 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0032859 // activation of Ral GTPase activity // not recorded /// 0032859 // activation of Ral GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity //  /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005096 // GTPase activator activity //  /// 0005488 // binding // inferred from electronic annotation /// 0017123 // Ral GTPase activator activity // not recorded /// 0017123 // Ral GTPase activator activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> 34.25 </td> <td> 55.67 </td> <td> 3.15 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 211073_x_at </td> <td> 211073_x_at </td> <td> BC006483 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006483.1 /DEF=Homo sapiens, ribosomal protein L3, clone MGC:4393, mRNA, complete cds.  /FEA=mRNA /PROD=ribosomal protein L3 /DB_XREF=gi:13623708 /FL=gb:BC006483.1 </td> <td> BC006483 </td> <td> RNA, U86 small nucleolar /// ribosomal protein L3 /// small nucleolar RNA, C/D box 83B </td> <td> RNU86 /// RPL3 /// SNORD83B </td> <td> 6122 /// 116936 /// 116938 </td> <td> NM_000967 /// NM_001033853 /// NR_000026 /// NR_000028 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1025.63 </td> <td> 3826.39 </td> <td> -3.15 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212638_s_at </td> <td> 212638_s_at </td> <td> BF131791 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF131791 /FEA=EST /DB_XREF=gi:10970831 /DB_XREF=est:601820701F1 /CLONE=IMAGE:4052256 /UG=Hs.324275 Homo sapiens mRNA; cDNA DKFZp434D2111 (from clone DKFZp434D2111) </td> <td> BF131791 </td> <td> WW domain containing E3 ubiquitin protein ligase 1 </td> <td> WWP1 </td> <td> 11059 </td> <td> NM_007013 /// XM_005250760 /// XM_005250761 </td> <td> 0007165 // signal transduction // non-traceable author statement /// 0007417 // central nervous system development // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0046718 // viral entry into host cell // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // not recorded /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> 93.37 </td> <td> 260.04 </td> <td> 3.15 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208943_s_at </td> <td> 208943_s_at </td> <td> U93239 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U93239.1 /DEF=Human Sec62 (Sec62) mRNA, complete cds. /FEA=mRNA /GEN=Sec62 /PROD=Sec62 /DB_XREF=gi:1928972 /UG=Hs.8146 translocation protein 1 /FL=gb:D87127.1 gb:U93239.1 gb:NM_003262.1 </td> <td> U93239 </td> <td> SEC62 homolog (S. cerevisiae) </td> <td> SEC62 </td> <td> 7095 </td> <td> NM_003262 </td> <td> 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006620 // posttranslational protein targeting to membrane // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0004872 // receptor activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation </td> <td> 55.55 </td> <td> 266.50 </td> <td> 3.15 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212209_at </td> <td> 212209_at </td> <td> AL133033 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL133033.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586E041 (from clone DKFZp586E041); partial cds.  /FEA=mRNA /GEN=DKFZp586E041 /PROD=hypothetical protein /DB_XREF=gi:6453435 /UG=Hs.4084 KIAA1025 protein </td> <td> AL133033 </td> <td> mediator complex subunit 13-like </td> <td> MED13L </td> <td> 23389 </td> <td> NM_015335 /// XM_006719305 /// XM_006719306 /// XM_006719307 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from electronic annotation </td> <td> 0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation </td> <td> -36.60 </td> <td> 132.05 </td> <td> -3.15 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 204538_x_at </td> <td> 204538_x_at </td> <td> NM_006985 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006985.1 /DEF=Homo sapiens nuclear pore complex interacting protein (NPIP), mRNA. /FEA=mRNA /GEN=NPIP /PROD=nuclear pore complex interacting protein /DB_XREF=gi:5902013 /UG=Hs.251928 nuclear pore complex interacting protein /FL=gb:AF132984.1 gb:NM_006985.1 </td> <td> NM_006985 </td> <td> nuclear pore complex interacting protein family, member A1 </td> <td> NPIPA1 </td> <td> 9284 </td> <td> NM_006985 /// XM_005255694 /// XM_005255695 /// XM_006720979 /// XM_006720980 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td>  </td> <td> -132.90 </td> <td> 315.00 </td> <td> -3.15 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202772_at </td> <td> 202772_at </td> <td> NM_000191 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000191.1 /DEF=Homo sapiens 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase (hydroxymethylglutaricaciduria) (HMGCL), mRNA.  /FEA=mRNA /GEN=HMGCL /PROD=3-hydroxymethyl-3-methylglutaryl-Coenzyme Alyase (hydroxymethylglutaricaciduria) /DB_XREF=gi:4504426 /UG=Hs.831 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase (hydroxymethylglutaricaciduria) /FL=gb:L07033.1 gb:NM_000191.1 </td> <td> NM_000191 </td> <td> 3-hydroxymethyl-3-methylglutaryl-CoA lyase </td> <td> HMGCL </td> <td> 3155 </td> <td> NM_000191 /// NM_001166059 </td> <td> 0001889 // liver development // inferred from electronic annotation /// 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006261 // DNA-dependent DNA replication // inferred from electronic annotation /// 0006552 // leucine catabolic process // non-traceable author statement /// 0006637 // acyl-CoA metabolic process // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046950 // cellular ketone body metabolic process // traceable author statement /// 0046951 // ketone body biosynthetic process // inferred from direct assay /// 0046951 // ketone body biosynthetic process // traceable author statement /// 0051262 // protein tetramerization // inferred from direct assay /// 0070542 // response to fatty acid // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0005777 // peroxisome // inferred from direct assay </td> <td> 0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0004419 // hydroxymethylglutaryl-CoA lyase activity // inferred from direct assay /// 0004419 // hydroxymethylglutaryl-CoA lyase activity // traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0031406 // carboxylic acid binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from direct assay </td> <td> -44.90 </td> <td> 172.93 </td> <td> -3.14 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200883_at </td> <td> 200883_at </td> <td> NM_003366 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003366.1 /DEF=Homo sapiens ubiquinol-cytochrome c reductase core protein II (UQCRC2), mRNA.  /FEA=mRNA /GEN=UQCRC2 /PROD=ubiquinol-cytochrome c reductase core proteinII /DB_XREF=gi:4507842 /UG=Hs.173554 ubiquinol-cytochrome c reductase core protein II /FL=gb:BC000484.1 gb:BC003136.1 gb:J04973.1 gb:NM_003366.1 </td> <td> NM_003366 </td> <td> ubiquinol-cytochrome c reductase core protein II </td> <td> UQCRC2 </td> <td> 7385 </td> <td> NM_003366 </td> <td> 0006119 // oxidative phosphorylation // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 106.05 </td> <td> 286.88 </td> <td> 3.14 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 219773_at </td> <td> 219773_at </td> <td> NM_016931 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016931.1 /DEF=Homo sapiens NADPH oxidase 4 (NOX4), mRNA. /FEA=mRNA /GEN=NOX4 /PROD=NADPH oxidase 4 /DB_XREF=gi:8393842 /UG=Hs.93847 NADPH oxidase 4 /FL=gb:AF254621.1 gb:AB041035.1 gb:NM_016931.1 gb:AF261943.1 </td> <td> NM_016931 </td> <td> NADPH oxidase 4 </td> <td> NOX4 </td> <td> 50507 </td> <td> NM_001143836 /// NM_001143837 /// NM_001291926 /// NM_001291927 /// NM_001291929 /// NM_016931 /// NR_026571 /// NR_120406 /// XM_006718847 /// XM_006718848 /// XM_006718849 /// XM_006718850 /// XM_006718851 /// XM_006718852 /// XM_006718853 /// XR_428978 /// XR_428979 </td> <td> 0000902 // cell morphogenesis // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006801 // superoxide metabolic process // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007569 // cell aging // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0035051 // cardiocyte differentiation // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0045453 // bone resorption // inferred from electronic annotation /// 0050667 // homocysteine metabolic process // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071480 // cellular response to gamma radiation // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from electronic annotation /// 2000573 // positive regulation of DNA biosynthetic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043020 // NADPH oxidase complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016174 // NAD(P)H oxidase activity // traceable author statement /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019826 // oxygen sensor activity // traceable author statement /// 0020037 // heme binding // traceable author statement /// 0050660 // flavin adenine dinucleotide binding // traceable author statement /// 0050664 // oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor // inferred from electronic annotation /// 0072341 // modified amino acid binding // inferred from direct assay </td> <td> 40.45 </td> <td> 194.38 </td> <td> 3.14 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 221264_s_at </td> <td> 221264_s_at </td> <td> NM_031214 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031214.1 /DEF=Homo sapiens hypothetical protein (AF311304), mRNA. /FEA=mRNA /GEN=AF311304 /PROD=hypothetical protein /DB_XREF=gi:13654285 /FL=gb:NM_031214.1 </td> <td> NM_031214 </td> <td> TAR DNA binding protein </td> <td> TARDBP </td> <td> 23435 </td> <td> NM_007375 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0043922 // negative regulation by host of viral transcription // inferred from direct assay /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 29.02 </td> <td> 39.84 </td> <td> 3.14 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 217965_s_at </td> <td> 217965_s_at </td> <td> NM_013260 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013260.1 /DEF=Homo sapiens transcriptional regulator protein (HCNGP), mRNA. /FEA=mRNA /GEN=HCNGP /PROD=transcriptional regulator protein /DB_XREF=gi:9994178 /UG=Hs.27299 transcriptional regulator protein /FL=gb:AF119664.1 gb:NM_013260.1 </td> <td> NM_013260 </td> <td> SAP30 binding protein </td> <td> SAP30BP </td> <td> 29115 </td> <td> NM_013260 /// XM_005257256 /// XM_006721849 /// XR_243648 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -38.88 </td> <td> 137.84 </td> <td> -3.14 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 221875_x_at </td> <td> 221875_x_at </td> <td> AW514210 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW514210 /FEA=EST /DB_XREF=gi:7152378 /DB_XREF=est:hd75b05.x1 /CLONE=IMAGE:2915313 /UG=Hs.110309 major histocompatibility complex, class I, F </td> <td> AW514210 </td> <td> major histocompatibility complex, class I, F </td> <td> HLA-F </td> <td> 3134 </td> <td> NM_001098478 /// NM_001098479 /// NM_018950 /// XM_005249054 /// XM_005272809 /// XM_005274960 /// XM_005275115 /// XM_005275390 /// XM_005275547 /// XM_005275548 /// XM_006726089 /// XM_006726090 /// XM_006726091 /// XM_006726092 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005102 // receptor binding // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0042605 // peptide antigen binding // not recorded /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046979 // TAP2 binding // inferred from physical interaction </td> <td> -122.83 </td> <td> 296.24 </td> <td> -3.14 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 46256_at </td> <td> 46256_at </td> <td> AA522670 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AA522670:ni39a05.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-979184 /clone_end=3' /gb=AA522670 /gi=2263382 /ug=Hs.7247 /len=684 </td> <td> AA522670 </td> <td> splA/ryanodine receptor domain and SOCS box containing 3 </td> <td> SPSB3 </td> <td> 90864 </td> <td> NM_080861 /// XM_005255673 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -115.18 </td> <td> 357.29 </td> <td> -3.13 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212712_at </td> <td> 212712_at </td> <td> BE222901 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE222901 /FEA=EST /DB_XREF=gi:8910219 /DB_XREF=est:hu44c03.x1 /CLONE=IMAGE:3172900 /UG=Hs.184793 Homo sapiens cDNA: FLJ21880 fis, clone HEP02743 </td> <td> BE222901 </td> <td> calmodulin regulated spectrin-associated protein 1 </td> <td> CAMSAP1 </td> <td> 157922 </td> <td> NM_015447 /// XM_005263396 /// XM_005263397 </td> <td> 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype /// 0031175 // neuron projection development // inferred from genetic interaction /// 0031175 // neuron projection development // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from sequence or structural similarity /// 0008017 // microtubule binding // inferred from direct assay /// 0030507 // spectrin binding // inferred from direct assay </td> <td> -41.22 </td> <td> 98.26 </td> <td> -3.13 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 213787_s_at </td> <td> 213787_s_at </td> <td> AV702405 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV702405 /FEA=EST /DB_XREF=gi:10718735 /DB_XREF=est:AV702405 /CLONE=ADBBFA03 /UG=Hs.75105 emopamil-binding protein (sterol isomerase) </td> <td> AV702405 </td> <td> emopamil binding protein (sterol isomerase) </td> <td> EBP </td> <td> 10682 </td> <td> NM_006579 </td> <td> 0001501 // skeletal system development // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006855 // drug transmembrane transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // traceable author statement /// 0016125 // sterol metabolic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0000247 // C-8 sterol isomerase activity // inferred from electronic annotation /// 0004769 // steroid delta-isomerase activity // traceable author statement /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0015238 // drug transmembrane transporter activity // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0047750 // cholestenol delta-isomerase activity // inferred from electronic annotation </td> <td> 65.35 </td> <td> 134.70 </td> <td> 3.13 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201192_s_at </td> <td> 201192_s_at </td> <td> NM_006224 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006224.1 /DEF=Homo sapiens phosphotidylinositol transfer protein (PITPN), mRNA. /FEA=mRNA /GEN=PITPN /PROD=phosphotidylinositol transfer protein /DB_XREF=gi:5453907 /UG=Hs.79709 phosphotidylinositol transfer protein /FL=gb:D30036.1 gb:M73704.1 gb:NM_006224.1 </td> <td> NM_006224 </td> <td> phosphatidylinositol transfer protein, alpha </td> <td> PITPNA </td> <td> 5306 </td> <td> NM_006224 </td> <td> 0006629 // lipid metabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0015914 // phospholipid transport // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0008525 // phosphatidylcholine transporter activity // traceable author statement /// 0008526 // phosphatidylinositol transporter activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0070540 // stearic acid binding // inferred from electronic annotation </td> <td> -47.00 </td> <td> 251.03 </td> <td> -3.13 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201528_at </td> <td> 201528_at </td> <td> BG398414 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG398414 /FEA=EST /DB_XREF=gi:13291862 /DB_XREF=est:602439888F1 /CLONE=IMAGE:4566380 /UG=Hs.84318 replication protein A1 (70kD) /FL=gb:M63488.1 gb:NM_002945.1 </td> <td> BG398414 </td> <td> replication protein A1, 70kDa </td> <td> RPA1 </td> <td> 6117 </td> <td> NM_002945 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // inferred from mutant phenotype /// 0000723 // telomere maintenance // traceable author statement /// 0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0000730 // DNA recombinase assembly // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006260 // DNA replication // inferred from mutant phenotype /// 0006260 // DNA replication // traceable author statement /// 0006261 // DNA-dependent DNA replication // traceable author statement /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006284 // base-excision repair // inferred from direct assay /// 0006289 // nucleotide-excision repair // inferred from mutant phenotype /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006298 // mismatch repair // inferred from mutant phenotype /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from electronic annotation </td> <td> 0000793 // condensed chromosome // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0000800 // lateral element // inferred from electronic annotation /// 0001673 // male germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005662 // DNA replication factor A complex // inferred from direct assay /// 0005662 // DNA replication factor A complex // inferred from physical interaction /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016605 // PML body // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 67.78 </td> <td> 188.19 </td> <td> 3.13 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212681_at </td> <td> 212681_at </td> <td> AI770004 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI770004 /FEA=EST /DB_XREF=gi:5236513 /DB_XREF=est:wh66d06.x1 /CLONE=IMAGE:2385707 /UG=Hs.103839 erythrocyte membrane protein band 4.1-like 3 </td> <td> AI770004 </td> <td> erythrocyte membrane protein band 4.1-like 3 </td> <td> EPB41L3 </td> <td> 23136 </td> <td> NM_001281533 /// NM_001281534 /// NM_001281535 /// NM_012307 /// XM_005258085 /// XM_005258086 /// XM_005258087 /// XM_005258088 /// XM_005258089 /// XM_005258090 /// XM_005258091 /// XM_006722301 /// XM_006722302 /// XM_006722303 /// XM_006722304 /// XM_006722305 /// XM_006722306 /// XM_006722307 /// XM_006722308 /// XM_006722309 /// XM_006722310 /// XM_006722311 /// XM_006722312 /// XM_006722313 /// XM_006722314 /// XM_006722315 /// XM_006722316 </td> <td> 0002175 // protein localization to paranode region of axon // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007016 // cytoskeletal anchoring at plasma membrane // traceable author statement /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0030865 // cortical cytoskeleton organization // traceable author statement /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0030913 // paranodal junction assembly // inferred from sequence or structural similarity /// 0043217 // myelin maintenance // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0071205 // protein localization to juxtaparanode region of axon // inferred from sequence or structural similarity /// 0072659 // protein localization to plasma membrane // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030673 // axolemma // inferred from sequence or structural similarity /// 0033270 // paranode region of axon // inferred from sequence or structural similarity /// 0044224 // juxtaparanode region of axon // inferred from sequence or structural similarity </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation </td> <td> -93.65 </td> <td> 199.05 </td> <td> -3.13 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 219444_at </td> <td> 219444_at </td> <td> NM_021946 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021946.1 /DEF=Homo sapiens hypothetical protein FLJ11362 (FLJ11362), mRNA. /FEA=mRNA /GEN=FLJ11362 /PROD=hypothetical protein FLJ11362 /DB_XREF=gi:11345489 /UG=Hs.8929 hypothetical protein FLJ11362 /FL=gb:NM_021946.1 </td> <td> NM_021946 </td> <td> BCL6 corepressor-like 1 </td> <td> BCORL1 </td> <td> 63035 </td> <td> NM_001184772 /// NM_021946 /// XM_005262452 /// XM_005262453 /// XM_005262454 /// XM_005262455 /// XM_005262456 /// XM_006724776 /// XM_006724777 /// XM_006724778 /// XM_006724779 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 42.28 </td> <td> 73.66 </td> <td> 3.13 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203336_s_at </td> <td> 203336_s_at </td> <td> AL548363 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL548363 /FEA=EST /DB_XREF=gi:12883296 /DB_XREF=est:AL548363 /CLONE=CS0DI016YO13 (5 prime) /UG=Hs.173274 integrin cytoplasmic domain-associated protein 1 /FL=gb:AF012023.1 gb:NM_004763.1 </td> <td> AL548363 </td> <td> integrin beta 1 binding protein 1 </td> <td> ITGB1BP1 </td> <td> 9270 </td> <td> NM_004763 /// NM_022334 /// XM_005246183 /// XM_005246184 /// XM_005246185 /// XM_005246186 /// XM_005246187 /// XM_005246188 /// XM_005246189 /// XM_006711903 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0002043 // blood vessel endothelial cell proliferation involved in sprouting angiogenesis // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006933 // negative regulation of cell adhesion involved in substrate-bound cell migration // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010764 // negative regulation of fibroblast migration // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from direct assay /// 0016477 // cell migration // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031214 // biomineral tissue development // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032148 // activation of protein kinase B activity // inferred from direct assay /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0033622 // integrin activation // inferred from sequence or structural similarity /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from sequence or structural similarity /// 0035148 // tube formation // inferred from direct assay /// 0035556 // intracellular signal transduction // traceable author statement /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0043088 // regulation of Cdc42 GTPase activity // inferred from direct assay /// 0043113 // receptor clustering // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0045747 // positive regulation of Notch signaling pathway // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050880 // regulation of blood vessel size // inferred from direct assay /// 0051451 // myoblast migration // inferred from sequence or structural similarity /// 0051496 // positive regulation of stress fiber assembly // inferred from sequence or structural similarity /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from electronic annotation /// 0051895 // negative regulation of focal adhesion assembly // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling // inferred from direct assay /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0090051 // negative regulation of cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0090314 // positive regulation of protein targeting to membrane // inferred from sequence or structural similarity /// 0090315 // negative regulation of protein targeting to membrane // inferred from direct assay /// 1900025 // negative regulation of substrate adhesion-dependent cell spreading // inferred from direct assay /// 2001044 // regulation of integrin-mediated signaling pathway // inferred from sequence or structural similarity </td> <td> 0001726 // ruffle // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0030027 // lamellipodium // inferred from direct assay /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071944 // cell periphery // inferred from direct assay </td> <td> 0005092 // GDP-dissociation inhibitor activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // traceable author statement /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from direct assay /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 40.10 </td> <td> 201.00 </td> <td> 3.13 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208626_s_at </td> <td> 208626_s_at </td> <td> BC001913 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001913.1 /DEF=Homo sapiens, Similar to membrane protein of cholinergic synaptic vesicles, clone MGC:2671, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to membrane protein of cholinergicsynaptic vesicles /DB_XREF=gi:12804920 /UG=Hs.157236 membrane protein of cholinergic synaptic vesicles /FL=gb:BC001913.1 gb:NM_006373.1 </td> <td> BC001913 </td> <td> vesicle amine transport 1 </td> <td> VAT1 </td> <td> 10493 </td> <td> NM_006373 </td> <td> 0010637 // negative regulation of mitochondrial fusion // inferred from mutant phenotype /// 0016049 // cell growth // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation </td> <td> -237.80 </td> <td> 1024.08 </td> <td> -3.13 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200018_at </td> <td> 200018_at </td> <td> NM_001017 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001017.1 /DEF=Homo sapiens ribosomal protein S13 (RPS13), mRNA. /FEA=mRNA /GEN=RPS13 /PROD=ribosomal protein S13 /DB_XREF=gi:4506684 /UG=Hs.165590 ribosomal protein S13 /FL=gb:BC000475.1 gb:L01124.1 gb:NM_001017.1 </td> <td> NM_001017 </td> <td> uncharacterized LOC100508408 /// ribosomal protein S13 /// small nucleolar RNA, C/D box 14B </td> <td> LOC100508408 /// RPS13 /// SNORD14B </td> <td> 6207 /// 85388 /// 100508408 </td> <td> NM_001017 /// NR_001452 /// XR_111163 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003729 // mRNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -593.03 </td> <td> 3137.99 </td> <td> -3.13 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208752_x_at </td> <td> 208752_x_at </td> <td> AI888672 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI888672 /FEA=EST /DB_XREF=gi:5593836 /DB_XREF=est:wn34c03.x1 /CLONE=IMAGE:2447332 /UG=Hs.179662 nucleosome assembly protein 1-like 1 /FL=gb:BC002387.1 gb:AL162068.1 </td> <td> AI888672 </td> <td> nucleosome assembly protein 1-like 1 </td> <td> NAP1L1 </td> <td> 4673 </td> <td> NM_004537 /// NM_139207 /// XM_005268895 /// XM_005268896 /// XM_006719422 /// XM_006719423 /// XM_006719424 /// XM_006719425 /// XR_245930 /// XR_245931 /// XR_245932 </td> <td> 0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -144.30 </td> <td> 1435.72 </td> <td> -3.13 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203229_s_at </td> <td> 203229_s_at </td> <td> NM_003993 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003993.1 /DEF=Homo sapiens CDC-like kinase 2 (CLK2), transcript variant phclk2, mRNA.  /FEA=mRNA /GEN=CLK2 /PROD=CDC-like kinase 2  isoform hclk2 /DB_XREF=gi:4502882 /UG=Hs.73986 CDC-like kinase 2 /FL=gb:NM_003993.1 gb:L29218.1 </td> <td> NM_003993 </td> <td> CDC-like kinase 2 </td> <td> CLK2 </td> <td> 1196 </td> <td> NM_001291 /// NM_001294338 /// NM_001294339 /// NM_003993 /// XM_005244876 /// XM_005244878 /// XM_005244879 /// XM_005276742 /// XM_005276744 /// XM_005276745 /// XR_241067 /// XR_254196 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0042221 // response to chemical // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0045721 // negative regulation of gluconeogenesis // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -77.25 </td> <td> 208.93 </td> <td> -3.12 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208805_at </td> <td> 208805_at </td> <td> BC002979 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002979.1 /DEF=Homo sapiens, proteasome (prosome, macropain) subunit, alpha type 6, clone MGC:2333, mRNA, complete cds.  /FEA=mRNA /PROD=proteasome (prosome, macropain) subunit, alphatype 6 /DB_XREF=gi:12804240 /UG=Hs.74077 proteasome (prosome, macropain) subunit, alpha type, 6 /FL=gb:BC002979.1 </td> <td> BC002979 </td> <td> KIAA0391 /// proteasome (prosome, macropain) subunit, alpha type, 6 </td> <td> KIAA0391 /// PSMA6 </td> <td> 5687 /// 9692 </td> <td> NM_001256678 /// NM_001256679 /// NM_001256680 /// NM_001256681 /// NM_001282232 /// NM_001282233 /// NM_001282234 /// NM_002791 /// NM_014672 /// NR_104110 /// XM_005268237 /// XM_006720334 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0008033 // tRNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050727 // regulation of inflammatory response // inferred by curator /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from mutant phenotype </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0005839 // proteasome core complex // non-traceable author statement /// 0005844 // polysome // inferred from direct assay /// 0016363 // nuclear matrix // inferred from sequence or structural similarity /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from direct assay /// 0019773 // proteasome core complex, alpha-subunit complex // traceable author statement /// 0030016 // myofibril // inferred from sequence or structural similarity /// 0030017 // sarcomere // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // non-traceable author statement /// 0004175 // endopeptidase activity // non-traceable author statement /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0035639 // purine ribonucleoside triphosphate binding // non-traceable author statement /// 0051059 // NF-kappaB binding // inferred from physical interaction </td> <td> -280.70 </td> <td> 966.12 </td> <td> -3.12 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 221844_x_at </td> <td> 221844_x_at </td> <td> AV756161 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV756161 /FEA=EST /DB_XREF=gi:10914009 /DB_XREF=est:AV756161 /CLONE=BMFBGA04 /UG=Hs.13323 hypothetical protein FLJ22059 </td> <td> AV756161 </td> <td> signal peptidase complex subunit 3 homolog (S. cerevisiae) </td> <td> SPCS3 </td> <td> 60559 </td> <td> NM_021928 </td> <td> 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005787 // signal peptidase complex // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 122.20 </td> <td> 487.15 </td> <td> 3.12 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202135_s_at </td> <td> 202135_s_at </td> <td> NM_005735 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005735.2 /DEF=Homo sapiens ARP1 (actin-related protein 1, yeast) homolog B (centractin beta) (ACTR1B), mRNA.  /FEA=mRNA /GEN=ACTR1B /PROD=actin-related protein 1B /DB_XREF=gi:13325060 /UG=Hs.2477 ARP1 (actin-related protein 1, yeast) homolog B (centractin beta) /FL=gb:NM_005735.2 gb:BC004374.1 </td> <td> NM_005735 </td> <td> ARP1 actin-related protein 1 homolog B, centractin beta (yeast) </td> <td> ACTR1B </td> <td> 10120 </td> <td> NM_005735 /// XM_005263854 </td> <td> 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005869 // dynactin complex // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> -27.60 </td> <td> 165.15 </td> <td> -3.12 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203879_at </td> <td> 203879_at </td> <td> U86453 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U86453.1 /DEF=Human phosphatidylinositol 3-kinase catalytic subunit p110delta mRNA, complete cds.  /FEA=mRNA /PROD=phosphatidylinositol 3-kinase catalytic subunitp110delta /DB_XREF=gi:2317893 /UG=Hs.162808 phosphoinositide-3-kinase, catalytic, delta polypeptide /FL=gb:U86453.1 gb:NM_005026.1 </td> <td> U86453 </td> <td> phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta </td> <td> PIK3CD </td> <td> 5293 </td> <td> NM_005026 /// XM_005263473 /// XM_006710686 /// XM_006710687 /// XM_006710688 /// XM_006710689 /// XM_006710690 </td> <td> 0001779 // natural killer cell differentiation // traceable author statement /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001816 // cytokine production // traceable author statement /// 0002250 // adaptive immune response // traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0002551 // mast cell chemotaxis // traceable author statement /// 0002679 // respiratory burst involved in defense response // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010818 // T cell chemotaxis // traceable author statement /// 0014065 // phosphatidylinositol 3-kinase signaling // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030101 // natural killer cell activation // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // traceable author statement /// 0030593 // neutrophil chemotaxis // traceable author statement /// 0035747 // natural killer cell chemotaxis // traceable author statement /// 0035754 // B cell chemotaxis // traceable author statement /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // non-traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042110 // T cell activation // traceable author statement /// 0042113 // B cell activation // traceable author statement /// 0043303 // mast cell degranulation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050853 // B cell receptor signaling pathway // traceable author statement /// 0060374 // mast cell differentiation // traceable author statement /// 0072672 // neutrophil extravasation // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005942 // phosphatidylinositol 3-kinase complex // non-traceable author statement /// 0042629 // mast cell granule // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0035004 // phosphatidylinositol 3-kinase activity // traceable author statement /// 0035005 // 1-phosphatidylinositol-4-phosphate 3-kinase activity // not recorded /// 0046934 // phosphatidylinositol-4,5-bisphosphate 3-kinase activity // not recorded </td> <td> -39.35 </td> <td> 96.17 </td> <td> -3.12 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209068_at </td> <td> 209068_at </td> <td> D89678 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D89678.1 /DEF=Homo sapiens mRNA for A+U-rich element RNA binding factor, complete cds.  /FEA=mRNA /PROD=A+U-rich element RNA binding factor /DB_XREF=gi:3218539 /UG=Hs.170311 heterogeneous nuclear ribonucleoprotein D-like /FL=gb:D89092.1 gb:D89678.1 </td> <td> D89678 </td> <td> heterogeneous nuclear ribonucleoprotein D-like </td> <td> HNRNPDL </td> <td> 9987 </td> <td> NM_001207000 /// NM_005463 /// NM_031372 /// NR_003249 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006396 // RNA processing // non-traceable author statement /// 0010468 // regulation of gene expression // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0008143 // poly(A) binding // inferred from direct assay /// 0034046 // poly(G) binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 67.30 </td> <td> 87.38 </td> <td> 3.12 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202016_at </td> <td> 202016_at </td> <td> NM_002402 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002402.1 /DEF=Homo sapiens mesoderm specific transcript (mouse) homolog (MEST), mRNA.  /FEA=mRNA /GEN=MEST /PROD=mesoderm specific transcript (mouse) homolog /DB_XREF=gi:4505154 /UG=Hs.79284 mesoderm specific transcript (mouse) homolog /FL=gb:BC002413.1 gb:D78611.1 gb:D87367.1 gb:NM_002402.1 </td> <td> NM_002402 </td> <td> mesoderm specific transcript </td> <td> MEST </td> <td> 4232 </td> <td> NM_001253900 /// NM_001253901 /// NM_001253902 /// NM_002402 /// NM_177524 /// NM_177525 </td> <td> 0007498 // mesoderm development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010883 // regulation of lipid storage // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 68.25 </td> <td> 213.12 </td> <td> 3.12 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 221500_s_at </td> <td> 221500_s_at </td> <td> BE782754 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE782754 /FEA=EST /DB_XREF=gi:10203952 /DB_XREF=est:601471903F1 /CLONE=IMAGE:3874921 /UG=Hs.102178 syntaxin 16 /FL=gb:AF008936.1 </td> <td> BE782754 </td> <td> syntaxin 16 </td> <td> STX16 </td> <td> 8675 </td> <td> NM_001001433 /// NM_001001434 /// NM_001134772 /// NM_001134773 /// NM_001204868 /// NM_003763 /// NR_037941 /// NR_037942 /// NR_037943 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from direct assay /// 0031201 // SNARE complex // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005484 // SNAP receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 56.87 </td> <td> 183.84 </td> <td> 3.12 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200639_s_at </td> <td> 200639_s_at </td> <td> NM_003406 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003406.1 /DEF=Homo sapiens tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, zeta polypeptide (YWHAZ), mRNA.  /FEA=mRNA /GEN=YWHAZ /PROD=tyrosine 3-monooxygenasetryptophan5-monooxygenase activation protein, zeta polypeptide /DB_XREF=gi:4507952 /UG=Hs.75103 tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, zeta polypeptide /FL=gb:BC003623.1 gb:M86400.1 gb:NM_003406.1 gb:U28964.1 </td> <td> NM_003406 </td> <td> tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta </td> <td> YWHAZ </td> <td> 7534 </td> <td> NM_001135699 /// NM_001135700 /// NM_001135701 /// NM_001135702 /// NM_003406 /// NM_145690 /// XM_005251060 /// XM_005251061 /// XM_005251062 /// XM_005251063 </td> <td> 0002553 // histamine secretion by mast cell // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010941 // regulation of cell death // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042629 // mast cell granule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 169.50 </td> <td> 740.50 </td> <td> 3.12 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 221867_at </td> <td> 221867_at </td> <td> BF436315 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF436315 /FEA=EST /DB_XREF=gi:11448630 /DB_XREF=est:7p06b05.x1 /CLONE=IMAGE:3644888 /UG=Hs.296338 ESTs </td> <td> BF436315 </td> <td> NEDD4 binding protein 1 </td> <td> N4BP1 </td> <td> 9683 </td> <td> NM_153029 /// XM_005256262 /// XM_006721351 </td> <td> 0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0034644 // cellular response to UV // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0016605 // PML body // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 31.62 </td> <td> 40.46 </td> <td> 3.12 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200643_at </td> <td> 200643_at </td> <td> NM_005336 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005336.1 /DEF=Homo sapiens high density lipoprotein binding protein (vigilin) (HDLBP), mRNA.  /FEA=mRNA /GEN=HDLBP /PROD=high density lipoprotein binding protein /DB_XREF=gi:4885408 /UG=Hs.177516 high density lipoprotein binding protein (vigilin) /FL=gb:BC001179.1 gb:M64098.1 gb:NM_005336.1 </td> <td> NM_005336 </td> <td> high density lipoprotein binding protein </td> <td> HDLBP </td> <td> 3069 </td> <td> NM_001243900 /// NM_005336 /// NM_203346 /// XM_005247000 /// XM_005247001 /// XM_005247002 /// XM_005247003 /// XM_006712475 /// XM_006712476 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -47.20 </td> <td> 240.38 </td> <td> -3.12 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201885_s_at </td> <td> 201885_s_at </td> <td> NM_000398 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000398.3 /DEF=Homo sapiens diaphorase (NADH) (cytochrome b-5 reductase) (DIA1), nuclear gene encoding mitochondrial protein, transcript variant M, mRNA.  /FEA=mRNA /GEN=DIA1 /PROD=cytochrome b5 reductase, membrane-bound isoform /DB_XREF=gi:6552326 /UG=Hs.274464 diaphorase (NADH) (cytochrome b-5 reductase) /FL=gb:BC004821.1 gb:NM_000398.3 </td> <td> NM_000398 </td> <td> cytochrome b5 reductase 3 </td> <td> CYB5R3 </td> <td> 1727 </td> <td> NM_000398 /// NM_001129819 /// NM_001171660 /// NM_001171661 /// NM_007326 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005833 // hemoglobin complex // traceable author statement /// 0016020 // membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004128 // cytochrome-b5 reductase activity, acting on NAD(P)H // traceable author statement /// 0016208 // AMP binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0043531 // ADP binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from direct assay </td> <td> -124.65 </td> <td> 889.75 </td> <td> -3.12 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 205290_s_at </td> <td> 205290_s_at </td> <td> NM_001200 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001200.1 /DEF=Homo sapiens bone morphogenetic protein 2 (BMP2), mRNA. /FEA=mRNA /GEN=BMP2 /PROD=bone morphogenetic protein 2 precursor /DB_XREF=gi:4557368 /UG=Hs.73853 bone morphogenetic protein 2 /FL=gb:NM_001200.1 </td> <td> NM_001200 </td> <td> bone morphogenetic protein 2 </td> <td> BMP2 </td> <td> 650 </td> <td> NM_001200 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001837 // epithelial to mesenchymal transition // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0002062 // chondrocyte differentiation // inferred from direct assay /// 0003130 // BMP signaling pathway involved in heart induction // inferred from direct assay /// 0003181 // atrioventricular valve morphogenesis // inferred from sequence or structural similarity /// 0003203 // endocardial cushion morphogenesis // inferred from sequence or structural similarity /// 0003308 // negative regulation of Wnt signaling pathway involved in heart development // inferred from direct assay /// 0006029 // proteoglycan metabolic process // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0007219 // Notch signaling pathway // inferred from sequence or structural similarity /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009887 // organ morphogenesis // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0010894 // negative regulation of steroid biosynthetic process // inferred from direct assay /// 0010922 // positive regulation of phosphatase activity // inferred from direct assay /// 0021537 // telencephalon development // inferred from direct assay /// 0021978 // telencephalon regionalization // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // traceable author statement /// 0030282 // bone mineralization // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from expression pattern /// 0030509 // BMP signaling pathway // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // traceable author statement /// 0031648 // protein destabilization // inferred from electronic annotation /// 0032348 // negative regulation of aldosterone biosynthetic process // inferred from direct assay /// 0033690 // positive regulation of osteoblast proliferation // inferred from sequence or structural similarity /// 0035051 // cardiocyte differentiation // inferred from direct assay /// 0035051 // cardiocyte differentiation // inferred from mutant phenotype /// 0035054 // embryonic heart tube anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0035630 // bone mineralization involved in bone maturation // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042482 // positive regulation of odontogenesis // inferred from sequence or structural similarity /// 0042487 // regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0045165 // cell fate commitment // inferred from sequence or structural similarity /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045778 // positive regulation of ossification // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048762 // mesenchymal cell differentiation // inferred from direct assay /// 0048839 // inner ear development // inferred from sequence or structural similarity /// 0051042 // negative regulation of calcium-independent cell-cell adhesion // inferred from direct assay /// 0051216 // cartilage development // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from mutant phenotype /// 0055008 // cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0060039 // pericardium development // inferred from sequence or structural similarity /// 0060128 // corticotropin hormone secreting cell differentiation // inferred from sequence or structural similarity /// 0060129 // thyroid-stimulating hormone-secreting cell differentiation // inferred from sequence or structural similarity /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from direct assay /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0060485 // mesenchyme development // inferred from mutant phenotype /// 0060804 // positive regulation of Wnt signaling pathway by BMP signaling pathway // inferred from sequence or structural similarity /// 0061036 // positive regulation of cartilage development // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071773 // cellular response to BMP stimulus // inferred from direct assay /// 0072138 // mesenchymal cell proliferation involved in ureteric bud development // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from expression pattern /// 1900745 // positive regulation of p38MAPK cascade // inferred from direct assay /// 1901522 // positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus // inferred from direct assay /// 2000065 // negative regulation of cortisol biosynthetic process // inferred from direct assay /// 2000726 // negative regulation of cardiac muscle cell differentiation // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay </td> <td> 0004745 // retinol dehydrogenase activity // inferred from sequence or structural similarity /// 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0019211 // phosphatase activator activity // inferred from direct assay /// 0046332 // SMAD binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070700 // BMP receptor binding // inferred from direct assay </td> <td> -37.22 </td> <td> 153.24 </td> <td> -3.11 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 216563_at </td> <td> 216563_at </td> <td> X80821 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X80821.1 /DEF=H.sapiens mRNA for ribosomal protein L18a homologue. /FEA=mRNA /PROD=ribosomal protein L18a homologue /DB_XREF=gi:527579 /UG=Hs.302177 H.sapiens mRNA for ribosomal protein L18a homologue </td> <td> X80821 </td> <td> ankyrin repeat domain 12 </td> <td> ANKRD12 </td> <td> 23253 </td> <td> NM_001083625 /// NM_001204056 /// NM_015208 /// XM_005258092 /// XM_005258093 /// XM_005258094 /// XM_005258095 /// XM_005258096 /// XM_006722317 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation </td> <td>  </td> <td> -57.82 </td> <td> 68.56 </td> <td> -3.11 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202547_s_at </td> <td> 202547_s_at </td> <td> AA778936 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA778936 /FEA=EST /DB_XREF=gi:2838267 /DB_XREF=est:zj38h05.s1 /CLONE=IMAGE:452601 /UG=Hs.172813 PAK-interacting exchange factor beta /FL=gb:D63476.1 gb:NM_003899.1 </td> <td> AA778936 </td> <td> Rho guanine nucleotide exchange factor (GEF) 7 </td> <td> ARHGEF7 </td> <td> 8874 </td> <td> NM_001113511 /// NM_001113512 /// NM_001113513 /// NM_003899 /// NM_145735 /// XM_005254085 /// XM_005254086 /// XM_005254087 /// XM_005254088 /// XM_005254089 /// XM_005254090 /// XM_005254091 /// XM_005254092 /// XM_005254093 /// XM_005254094 /// XM_005254095 /// XM_006719956 /// XM_006719957 /// XM_006719958 /// XM_006719959 /// XM_006719960 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from sequence or structural similarity /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> -50.92 </td> <td> 143.74 </td> <td> -3.11 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200099_s_at </td> <td> 200099_s_at </td> <td> AL356115 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL356115 /DEF=Human DNA sequence from clone RP11-486O22 on chromosome 10 Contains the 3part of a gene for KIAA1128 protein, a novel pseudogene, a gene for protein similar to RPS3A (ribosomal protein S3A), ESTs, STSs, GSSs and CpG islands /FEA=CDS_1 /DB_XREF=gi:9795038 /UG=Hs.307132 Human DNA sequence from clone RP11-486O22 on chromosome 10 Contains the 3part of a gene for KIAA1128 protein, a novel pseudogene, a gene for protein similar to RPS3A (ribosomal protein S3A), ESTs, STSs, GSSs and CpG islands </td> <td> AL356115 </td> <td> ribosomal protein S3A /// small nucleolar RNA, C/D box 73A </td> <td> RPS3A /// SNORD73A </td> <td> 6189 /// 8944 </td> <td> NM_001006 /// NM_001267699 /// NR_000007 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0002181 // cytoplasmic translation // not recorded /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from mutant phenotype /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0097194 // execution phase of apoptosis // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -644.40 </td> <td> 3288.82 </td> <td> -3.11 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 45749_at </td> <td> 45749_at </td> <td> AA400206 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AA400206:zu69a02.r1 Homo sapiens cDNA, 5 end /clone=IMAGE-743210 /clone_end=5' /gb=AA400206 /gi=2054077 /ug=Hs.3074 /len=579 </td> <td> AA400206 </td> <td> family with sequence similarity 65, member A </td> <td> FAM65A </td> <td> 79567 </td> <td> NM_001193522 /// NM_001193523 /// NM_001193524 /// NM_024519 /// XM_006721269 /// XM_006721270 </td> <td> 0007165 // signal transduction // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation </td> <td> -60.00 </td> <td> 429.40 </td> <td> -3.11 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218120_s_at </td> <td> 218120_s_at </td> <td> D21243 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D21243.1 /DEF=Human mRNA for heme oxygenase-2, complete cds. /FEA=mRNA /PROD=heme oxygenase-2 /DB_XREF=gi:416226 /UG=Hs.284279 heme oxygenase (decycling) 2 /FL=gb:BC002396.1 gb:D21243.1 gb:NM_002134.2 </td> <td> D21243 </td> <td> heme oxygenase (decycling) 2 </td> <td> HMOX2 </td> <td> 3163 </td> <td> NM_001127204 /// NM_001127205 /// NM_001127206 /// NM_001286267 /// NM_001286268 /// NM_001286269 /// NM_001286270 /// NM_001286271 /// NM_002134 </td> <td> 0001666 // response to hypoxia // inferred from direct assay /// 0006778 // porphyrin-containing compound metabolic process // traceable author statement /// 0006788 // heme oxidation // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0042167 // heme catabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004392 // heme oxygenase (decyclizing) activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 52.80 </td> <td> 161.72 </td> <td> 3.11 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209733_at </td> <td> 209733_at </td> <td> AL034399 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL034399 /DEF=Human DNA sequence from clone 191P20 on chromosome Xq23. Contains a pseudogene similar to AngiotensinVasopressin receptor AIIAVP, and the 3 end of a novel Fibronectin type III domain containing protein similar to Ring finger protein MID1 (Midli... /FEA=mRNA /DB_XREF=gi:4493484 /UG=Hs.12256 midline 2 /FL=gb:AF196481.1 </td> <td> AL034399 </td> <td> midline 2 </td> <td> MID2 </td> <td> 11043 </td> <td> NM_012216 /// NM_052817 /// XM_005262062 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0032897 // negative regulation of viral transcription // inferred from direct assay /// 0035372 // protein localization to microtubule // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0045087 // innate immune response // inferred from direct assay /// 0046597 // negative regulation of viral entry into host cell // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 1902187 // negative regulation of viral release from host cell // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008017 // microtubule binding // inferred from mutant phenotype /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0051219 // phosphoprotein binding // inferred from physical interaction </td> <td> 43.55 </td> <td> 60.53 </td> <td> 3.11 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 213414_s_at </td> <td> 213414_s_at </td> <td> BE259729 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE259729 /FEA=EST /DB_XREF=gi:9130437 /DB_XREF=est:601145954F1 /CLONE=IMAGE:3161244 /UG=Hs.298262 ribosomal protein S19 </td> <td> BE259729 </td> <td> ribosomal protein S19 </td> <td> RPS19 </td> <td> 6223 </td> <td> NM_001022 </td> <td> 0000028 // ribosomal small subunit assembly // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000462 // maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from mutant phenotype /// 0002548 // monocyte chemotaxis // inferred from direct assay /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007000 // nucleolus organization // inferred from mutant phenotype /// 0009991 // response to extracellular stimulus // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0030218 // erythrocyte differentiation // inferred from mutant phenotype /// 0030490 // maturation of SSU-rRNA // inferred from mutant phenotype /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051262 // protein tetramerization // inferred from direct assay /// 0051272 // positive regulation of cellular component movement // traceable author statement /// 0060265 // positive regulation of respiratory burst involved in inflammatory response // inferred from direct assay /// 0060266 // negative regulation of respiratory burst involved in inflammatory response // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1043.10 </td> <td> 4312.20 </td> <td> -3.10 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212822_at </td> <td> 212822_at </td> <td> AA121502 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA121502 /FEA=EST /DB_XREF=gi:1679116 /DB_XREF=est:zk88a11.s1 /CLONE=IMAGE:489884 /UG=Hs.10491 KIAA1237 protein </td> <td> AA121502 </td> <td> heart development protein with EGF-like domains 1 </td> <td> HEG1 </td> <td> 57493 </td> <td> NM_020733 /// XM_005247666 </td> <td> 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001885 // endothelial cell development // inferred from electronic annotation /// 0001886 // endothelial cell morphogenesis // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0003017 // lymph circulation // inferred from electronic annotation /// 0003209 // cardiac atrium morphogenesis // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0007043 // cell-cell junction assembly // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0048845 // venous blood vessel morphogenesis // inferred from electronic annotation /// 0050878 // regulation of body fluid levels // inferred from electronic annotation /// 0060039 // pericardium development // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 50.02 </td> <td> 107.59 </td> <td> 3.10 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201828_x_at </td> <td> 201828_x_at </td> <td> NM_003928 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003928.1 /DEF=Homo sapiens CAAX box 1 (CXX1), mRNA. /FEA=mRNA /GEN=CXX1 /PROD=CAAX box 1 /DB_XREF=gi:4503180 /UG=Hs.250708 CAAX box 1 /FL=gb:BC002385.1 gb:BC002410.1 gb:AF038168.1 gb:AF052096.1 gb:NM_003928.1 </td> <td> NM_003928 </td> <td> family with sequence similarity 127, member A </td> <td> FAM127A </td> <td> 8933 </td> <td> NM_001078171 /// NM_003928 </td> <td>  </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td>  </td> <td> 127.50 </td> <td> 520.98 </td> <td> 3.10 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218201_at </td> <td> 218201_at </td> <td> NM_004546 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004546.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2 (8kD, AGGG) (NDUFB2), mRNA.  /FEA=mRNA /GEN=NDUFB2 /PROD=NADH dehydrogenase (ubiquinone) 1 betasubcomplex, 2 (8kD, AGGG) /DB_XREF=gi:4758777 /UG=Hs.198272 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2 (8kD, AGGG) /FL=gb:BC001168.1 gb:AF050639.1 gb:NM_004546.1 gb:AF067166.1 </td> <td> NM_004546 </td> <td> NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa </td> <td> NDUFB2 </td> <td> 4708 </td> <td> NM_004546 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> 41.28 </td> <td> 208.16 </td> <td> 3.10 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 204804_at </td> <td> 204804_at </td> <td> NM_003141 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003141.1 /DEF=Homo sapiens Sjogren syndrome antigen A1 (52kD, ribonucleoprotein autoantigen SS-ARo) (SSA1), mRNA.  /FEA=mRNA /GEN=SSA1 /PROD=52kD RoSSA autoantigen /DB_XREF=gi:4507226 /UG=Hs.1042 Sjogren syndrome antigen A1 (52kD, ribonucleoprotein autoantigen SS-ARo) /FL=gb:M34551.1 gb:M62800.1 gb:NM_003141.1 </td> <td> NM_003141 </td> <td> tripartite motif containing 21 </td> <td> TRIM21 </td> <td> 6737 </td> <td> NM_003141 /// XM_006718283 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031648 // protein destabilization // inferred from mutant phenotype /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032479 // regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032897 // negative regulation of viral transcription // inferred from direct assay /// 0045087 // innate immune response // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045787 // positive regulation of cell cycle // inferred from mutant phenotype /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0070206 // protein trimerization // inferred from direct assay /// 0090086 // negative regulation of protein deubiquitination // inferred from mutant phenotype /// 1902187 // negative regulation of viral release from host cell // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -63.50 </td> <td> 118.90 </td> <td> -3.10 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218370_s_at </td> <td> 218370_s_at </td> <td> NM_022753 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022753.1 /DEF=Homo sapiens hypothetical protein FLJ12903 (FLJ12903), mRNA. /FEA=mRNA /GEN=FLJ12903 /PROD=hypothetical protein FLJ12903 /DB_XREF=gi:12232418 /UG=Hs.14928 hypothetical protein FLJ12903 /FL=gb:NM_022753.1 </td> <td> NM_022753 </td> <td> S100P binding protein </td> <td> S100PBP </td> <td> 64766 </td> <td> NM_001017406 /// NM_001256121 /// NM_022753 /// XM_006710818 /// XM_006710819 /// XM_006710820 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> 29.88 </td> <td> 50.71 </td> <td> 3.10 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202358_s_at </td> <td> 202358_s_at </td> <td> BG434168 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG434168 /FEA=EST /DB_XREF=gi:13340674 /DB_XREF=est:602506096F1 /CLONE=IMAGE:4603630 /UG=Hs.76906 KIAA0254 gene product /FL=gb:D87443.1 gb:NM_014758.1 </td> <td> BG434168 </td> <td> sorting nexin 19 </td> <td> SNX19 </td> <td> 399979 </td> <td> NM_014758 /// XM_005271545 /// XM_005271546 /// XM_005271548 /// XM_005271549 /// XR_428976 /// XR_428977 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation </td> <td> 29.97 </td> <td> 47.51 </td> <td> 3.10 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 214077_x_at </td> <td> 214077_x_at </td> <td> H15129 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:H15129 /FEA=EST /DB_XREF=gi:879949 /DB_XREF=est:ym30b02.s1 /CLONE=IMAGE:49680 /UG=Hs.117313 Meis (mouse) homolog 3 </td> <td> H15129 </td> <td> Meis homeobox 3 pseudogene 1 </td> <td> MEIS3P1 </td> <td> 4213 </td> <td> NR_002211 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -45.98 </td> <td> 74.34 </td> <td> -3.10 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208660_at </td> <td> 208660_at </td> <td> BC000105 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000105.1 /DEF=Homo sapiens, Similar to CG14740 gene product, clone MGC:2503, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to CG14740 gene product /DB_XREF=gi:12652712 /UG=Hs.239760 citrate synthase /FL=gb:BC000105.1 gb:AF047042.1 gb:NM_004077.1 </td> <td> BC000105 </td> <td> citrate synthase </td> <td> CS </td> <td> 1431 </td> <td> NM_004077 /// NM_198324 </td> <td> 0005975 // carbohydrate metabolic process // inferred from direct assay /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044262 // cellular carbohydrate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004108 // citrate (Si)-synthase activity // inferred from direct assay /// 0004108 // citrate (Si)-synthase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046912 // transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer // inferred from electronic annotation </td> <td> 56.37 </td> <td> 571.06 </td> <td> 3.10 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201057_s_at </td> <td> 201057_s_at </td> <td> NM_004487 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004487.1 /DEF=Homo sapiens golgi autoantigen, golgin subfamily b, macrogolgin (with transmembrane signal), 1 (GOLGB1), mRNA.  /FEA=mRNA /GEN=GOLGB1 /PROD=golgi autoantigen, golgin subfamily b,macrogolgin (with transmembrane signal), 1 /DB_XREF=gi:4758453 /UG=Hs.7844 golgi autoantigen, golgin subfamily b, macrogolgin (with transmembrane signal), 1 /FL=gb:NM_004487.1 </td> <td> NM_004487 </td> <td> golgin B1 </td> <td> GOLGB1 </td> <td> 2804 </td> <td> NM_001256486 /// NM_001256487 /// NM_001256488 /// NM_004487 /// XM_005247371 /// XM_005247372 /// XM_005247373 /// XM_006713587 /// XM_006713588 /// XM_006713589 /// XM_006713590 /// XM_006713591 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007030 // Golgi organization // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005795 // Golgi stack // traceable author statement /// 0005801 // cis-Golgi network // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -44.27 </td> <td> 213.31 </td> <td> -3.09 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 217975_at </td> <td> 217975_at </td> <td> NM_016303 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016303.1 /DEF=Homo sapiens pp21 homolog (LOC51186), mRNA. /FEA=mRNA /GEN=LOC51186 /PROD=pp21 homolog /DB_XREF=gi:10047099 /UG=Hs.15984 pp21 homolog /FL=gb:NM_016303.1 gb:AF125535.1 </td> <td> NM_016303 </td> <td> WW domain binding protein 5 </td> <td> WBP5 </td> <td> 51186 </td> <td> NM_001006612 /// NM_001006613 /// NM_001006614 /// NM_016303 </td> <td>  </td> <td>  </td> <td> 0050699 // WW domain binding // inferred from electronic annotation </td> <td> -108.48 </td> <td> 1010.09 </td> <td> -3.09 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201908_at </td> <td> 201908_at </td> <td> NM_004423 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004423.2 /DEF=Homo sapiens dishevelled 3 (homologous to Drosophila dsh) (DVL3), mRNA.  /FEA=mRNA /GEN=DVL3 /PROD=dishevelled 3 /DB_XREF=gi:6806886 /UG=Hs.174044 dishevelled 3 (homologous to Drosophila dsh) /FL=gb:U49262.1 gb:D86963.1 gb:U75651.1 gb:AF006013.1 gb:NM_004423.2 </td> <td> NM_004423 </td> <td> dishevelled segment polarity protein 3 </td> <td> DVL3 </td> <td> 1857 </td> <td> NM_004423 /// XM_005247172 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0003148 // outflow tract septum morphogenesis // not recorded /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035567 // non-canonical Wnt signaling pathway // inferred from mutant phenotype /// 0038031 // non-canonical Wnt signaling pathway via JNK cascade // inferred from sequence or structural similarity /// 0042493 // response to drug // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0060026 // convergent extension // not recorded /// 0060070 // canonical Wnt signaling pathway // inferred from direct assay /// 0060070 // canonical Wnt signaling pathway // inferred from mutant phenotype /// 0060071 // Wnt signaling pathway, planar cell polarity pathway // inferred from direct assay /// 0090103 // cochlea morphogenesis // not recorded /// 0090179 // planar cell polarity pathway involved in neural tube closure // not recorded </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005938 // cell cortex // not recorded </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005109 // frizzled binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay </td> <td> 61.57 </td> <td> 146.11 </td> <td> 3.09 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202351_at </td> <td> 202351_at </td> <td> AI093579 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI093579 /FEA=EST /DB_XREF=gi:3432555 /DB_XREF=est:qb15g06.x1 /CLONE=IMAGE:1696378 /UG=Hs.295726 integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51) /FL=gb:M14648.1 gb:NM_002210.1 </td> <td> AI093579 </td> <td> integrin, alpha V </td> <td> ITGAV </td> <td> 3685 </td> <td> NM_001144999 /// NM_001145000 /// NM_002210 /// XM_005246536 /// XM_006712513 </td> <td> 0001525 // angiogenesis // inferred from expression pattern /// 0001568 // blood vessel development // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // non-traceable author statement /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from mutant phenotype /// 0010888 // negative regulation of lipid storage // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031589 // cell-substrate adhesion // inferred from mutant phenotype /// 0032369 // negative regulation of lipid transport // inferred from mutant phenotype /// 0033690 // positive regulation of osteoblast proliferation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from electronic annotation /// 0045715 // negative regulation of low-density lipoprotein particle receptor biosynthetic process // inferred from mutant phenotype /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0046718 // viral entry into host cell // traceable author statement /// 0050748 // negative regulation of lipoprotein metabolic process // inferred from mutant phenotype /// 0050764 // regulation of phagocytosis // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0052066 // entry of symbiont into host cell by promotion of host phagocytosis // non-traceable author statement /// 0070371 // ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from sequence or structural similarity /// 2000425 // regulation of apoptotic cell clearance // inferred from sequence or structural similarity /// 2000536 // negative regulation of entry of bacterium into host cell // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0008305 // integrin complex // inferred from direct assay /// 0008305 // integrin complex // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0035867 // alphav-beta3 integrin-IGF-1-IGF1R complex // inferred from direct assay /// 0045335 // phagocytic vesicle // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0001846 // opsonin binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005245 // voltage-gated calcium channel activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0031994 // insulin-like growth factor I binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050431 // transforming growth factor beta binding // inferred from sequence or structural similarity </td> <td> -178.03 </td> <td> 978.26 </td> <td> -3.09 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202272_s_at </td> <td> 202272_s_at </td> <td> NM_015176 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015176.1 /DEF=Homo sapiens KIAA0483 protein (KIAA0483), mRNA. /FEA=mRNA /GEN=KIAA0483 /PROD=KIAA0483 protein /DB_XREF=gi:7662157 /UG=Hs.64691 KIAA0483 protein /FL=gb:NM_015176.1 </td> <td> NM_015176 </td> <td> F-box protein 28 </td> <td> FBXO28 </td> <td> 23219 </td> <td> NM_001136115 /// NM_015176 /// NR_049764 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -77.92 </td> <td> 245.14 </td> <td> -3.09 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202578_s_at </td> <td> 202578_s_at </td> <td> NM_018332 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018332.1 /DEF=Homo sapiens hypothetical protein FLJ11126 (FLJ11126), mRNA. /FEA=mRNA /GEN=FLJ11126 /PROD=hypothetical protein FLJ11126 /DB_XREF=gi:8922885 /UG=Hs.226396 hypothetical protein FLJ11126 /FL=gb:BC005162.1 gb:NM_018332.1 </td> <td> NM_018332 </td> <td> DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A </td> <td> DDX19A </td> <td> 55308 </td> <td> NM_018332 /// XM_005256030 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 34.10 </td> <td> 84.28 </td> <td> 3.09 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201492_s_at </td> <td> 201492_s_at </td> <td> NM_021104 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021104.1 /DEF=Homo sapiens ribosomal protein L41 (RPL41), mRNA. /FEA=mRNA /GEN=RPL41 /PROD=ribosomal protein L41 /DB_XREF=gi:10863874 /UG=Hs.324406 ribosomal protein L41 /FL=gb:NM_021104.1 </td> <td> NM_021104 </td> <td> ribosomal protein L41 </td> <td> RPL41 </td> <td> 6171 </td> <td> NM_001035267 /// NM_021104 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement </td> <td> -730.15 </td> <td> 4406.45 </td> <td> -3.09 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 210561_s_at </td> <td> 210561_s_at </td> <td> AL110243 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL110243.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564B0482 (from clone DKFZp564B0482); complete cds.  /FEA=mRNA /GEN=DKFZp564B0482 /PROD=hypothetical protein /DB_XREF=gi:5817189 /UG=Hs.187991 DKFZP564A122 protein /FL=gb:AF072880.1 gb:AF106683.1 gb:AL110243.1 gb:AF112205.1 gb:AF069313.2 </td> <td> AL110243 </td> <td> WD repeat and SOCS box containing 1 </td> <td> WSB1 </td> <td> 26118 </td> <td> NM_015626 /// NM_134264 /// NM_134265 /// XM_005257963 /// XR_243778 /// XR_429881 </td> <td> 0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation </td> <td> -153.85 </td> <td> 538.00 </td> <td> -3.09 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203737_s_at </td> <td> 203737_s_at </td> <td> NM_015062 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015062.1 /DEF=Homo sapiens KIAA0595 protein (KIAA0595), mRNA. /FEA=mRNA /GEN=KIAA0595 /PROD=KIAA0595 protein /DB_XREF=gi:13124753 /UG=Hs.146957 KIAA0595 protein /FL=gb:BC002561.1 gb:AF325193.1 gb:NM_015062.1 </td> <td> NM_015062 </td> <td> peroxisome proliferator-activated receptor gamma, coactivator-related 1 </td> <td> PPRC1 </td> <td> 23082 </td> <td> NM_001288727 /// NM_001288728 /// NM_015062 /// XM_005269656 /// XM_005269658 /// XM_006717730 /// XM_006717731 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 37.18 </td> <td> 84.89 </td> <td> 3.09 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209061_at </td> <td> 209061_at </td> <td> AI761748 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI761748 /FEA=EST /DB_XREF=gi:5177504 /DB_XREF=est:wg67h01.x1 /CLONE=IMAGE:2370193 /UG=Hs.225977 nuclear receptor coactivator 3 /FL=gb:AF010227.1 gb:AF012108.1 gb:AF016031.1 </td> <td> AI761748 </td> <td> nuclear receptor coactivator 3 </td> <td> NCOA3 </td> <td> 8202 </td> <td> NM_001174087 /// NM_001174088 /// NM_006534 /// NM_181659 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0016573 // histone acetylation // inferred from direct assay /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035624 // receptor transactivation // traceable author statement /// 0045618 // positive regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048589 // developmental growth // inferred from electronic annotation /// 0060068 // vagina development // inferred from electronic annotation /// 0060713 // labyrinthine layer morphogenesis // inferred from electronic annotation /// 0060744 // mammary gland branching involved in thelarche // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from electronic annotation /// 0035257 // nuclear hormone receptor binding // inferred from direct assay /// 0046966 // thyroid hormone receptor binding // non-traceable author statement /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // non-traceable author statement </td> <td> 35.85 </td> <td> 58.20 </td> <td> 3.09 </td> <td> 0.02 </td> <td> 0.03 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200004_at </td> <td> 200004_at </td> <td> NM_001418 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001418.1 /DEF=Homo sapiens eukaryotic translation initiation factor 4 gamma, 2 (EIF4G2), mRNA.  /FEA=mRNA /GEN=EIF4G2 /PROD=eukaryotic translation initiation factor 4gamma, 2 /DB_XREF=gi:4503538 /UG=Hs.183684 eukaryotic translation initiation factor 4 gamma, 2 /FL=gb:U73824.1 gb:U76111.1 gb:NM_001418.1 </td> <td> NM_001418 </td> <td> eukaryotic translation initiation factor 4 gamma, 2 </td> <td> EIF4G2 </td> <td> 1982 </td> <td> NM_001042559 /// NM_001172705 /// NM_001418 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0007050 // cell cycle arrest // traceable author statement /// 0008219 // cell death // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016281 // eukaryotic translation initiation factor 4F complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -305.88 </td> <td> 2231.71 </td> <td> -3.08 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201432_at </td> <td> 201432_at </td> <td> NM_001752 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001752.1 /DEF=Homo sapiens catalase (CAT), mRNA. /FEA=mRNA /GEN=CAT /PROD=catalase /DB_XREF=gi:4557013 /UG=Hs.76359 catalase /FL=gb:NM_001752.1 </td> <td> NM_001752 </td> <td> catalase </td> <td> CAT </td> <td> 847 </td> <td> NM_001752 </td> <td> 0000302 // response to reactive oxygen species // inferred from mutant phenotype /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006195 // purine nucleotide catabolic process // traceable author statement /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009060 // aerobic respiration // inferred from electronic annotation /// 0009650 // UV protection // inferred from mutant phenotype /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from electronic annotation /// 0020027 // hemoglobin metabolic process // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0042697 // menopause // inferred from electronic annotation /// 0042744 // hydrogen peroxide catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051289 // protein homotetramerization // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from sequence or structural similarity /// 0005782 // peroxisomal matrix // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004046 // aminoacylase activity // inferred from electronic annotation /// 0004096 // catalase activity // inferred from direct assay /// 0004096 // catalase activity // traceable author statement /// 0004601 // peroxidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0016209 // antioxidant activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016684 // oxidoreductase activity, acting on peroxide as acceptor // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from physical interaction /// 0020037 // heme binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from direct assay </td> <td> 62.70 </td> <td> 265.62 </td> <td> 3.08 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201320_at </td> <td> 201320_at </td> <td> BF663402 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF663402 /FEA=EST /DB_XREF=gi:11937297 /DB_XREF=est:602144558F1 /CLONE=IMAGE:4297695 /UG=Hs.236030 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 /FL=gb:U66616.1 gb:NM_003075.1 </td> <td> BF663402 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 </td> <td> SMARCC2 </td> <td> 6601 </td> <td> NM_001130420 /// NM_003075 /// NM_139067 /// XM_005269101 /// XM_005269102 /// XM_005269103 /// XM_005269104 </td> <td> 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from physical interaction /// 0043234 // protein complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay </td> <td> 47.80 </td> <td> 61.50 </td> <td> 3.08 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200642_at </td> <td> 200642_at </td> <td> NM_000454 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000454.1 /DEF=Homo sapiens superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult)) (SOD1), mRNA.  /FEA=mRNA /GEN=SOD1 /PROD=superoxide dismutase 1, soluble (amyotrophiclateral sclerosis 1 (adult)) /DB_XREF=gi:4507148 /UG=Hs.75428 superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult)) /FL=gb:BC001034.1 gb:K00065.1 gb:NM_000454.1 </td> <td> NM_000454 </td> <td> superoxide dismutase 1, soluble </td> <td> SOD1 </td> <td> 6647 </td> <td> NM_000454 </td> <td> 0000187 // activation of MAPK activity // inferred from sequence or structural similarity /// 0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0000303 // response to superoxide // inferred from direct assay /// 0001541 // ovarian follicle development // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from direct assay /// 0001890 // placenta development // non-traceable author statement /// 0001895 // retina homeostasis // inferred from sequence or structural similarity /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0002262 // myeloid cell homeostasis // inferred from sequence or structural similarity /// 0002576 // platelet degranulation // traceable author statement /// 0006302 // double-strand break repair // inferred from sequence or structural similarity /// 0006309 // apoptotic DNA fragmentation // inferred from sequence or structural similarity /// 0006749 // glutathione metabolic process // inferred from sequence or structural similarity /// 0006801 // superoxide metabolic process // inferred from direct assay /// 0006801 // superoxide metabolic process // inferred from sequence or structural similarity /// 0006879 // cellular iron ion homeostasis // inferred from sequence or structural similarity /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007566 // embryo implantation // inferred from sequence or structural similarity /// 0007566 // embryo implantation // non-traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007569 // cell aging // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0007605 // sensory perception of sound // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0008089 // anterograde axon cargo transport // inferred from sequence or structural similarity /// 0008090 // retrograde axon cargo transport // inferred from sequence or structural similarity /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0008219 // cell death // inferred from electronic annotation /// 0009408 // response to heat // inferred from sequence or structural similarity /// 0010033 // response to organic substance // inferred from direct assay /// 0019226 // transmission of nerve impulse // inferred from sequence or structural similarity /// 0019430 // removal of superoxide radicals // not recorded /// 0019430 // removal of superoxide radicals // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032287 // peripheral nervous system myelin maintenance // inferred from sequence or structural similarity /// 0032314 // regulation of Rac GTPase activity // inferred from direct assay /// 0032930 // positive regulation of superoxide anion generation // inferred from direct assay /// 0033081 // regulation of T cell differentiation in thymus // non-traceable author statement /// 0040014 // regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0042493 // response to drug // inferred from sequence or structural similarity /// 0042542 // response to hydrogen peroxide // inferred from sequence or structural similarity /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred by curator /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0045471 // response to ethanol // inferred from sequence or structural similarity /// 0045541 // negative regulation of cholesterol biosynthetic process // inferred from direct assay /// 0045859 // regulation of protein kinase activity // inferred from direct assay /// 0046620 // regulation of organ growth // non-traceable author statement /// 0046688 // response to copper ion // inferred from electronic annotation /// 0046716 // muscle cell cellular homeostasis // inferred from sequence or structural similarity /// 0048538 // thymus development // non-traceable author statement /// 0048678 // response to axon injury // inferred from sequence or structural similarity /// 0050665 // hydrogen peroxide biosynthetic process // inferred from direct assay /// 0050665 // hydrogen peroxide biosynthetic process // inferred from sequence or structural similarity /// 0051881 // regulation of mitochondrial membrane potential // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060047 // heart contraction // inferred from direct assay /// 0060052 // neurofilament cytoskeleton organization // inferred from sequence or structural similarity /// 0060087 // relaxation of vascular smooth muscle // inferred from sequence or structural similarity /// 0060088 // auditory receptor cell stereocilium organization // inferred from sequence or structural similarity /// 0072593 // reactive oxygen species metabolic process // inferred from direct assay /// 1902177 // positive regulation of intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0032839 // dendrite cytoplasm // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004784 // superoxide dismutase activity // not recorded /// 0004784 // superoxide dismutase activity // inferred from direct assay /// 0004784 // superoxide dismutase activity // traceable author statement /// 0005507 // copper ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016209 // antioxidant activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0030346 // protein phosphatase 2B binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048365 // Rac GTPase binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> 143.00 </td> <td> 982.52 </td> <td> 3.08 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212702_s_at </td> <td> 212702_s_at </td> <td> N45111 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N45111 /FEA=EST /DB_XREF=gi:1186277 /DB_XREF=est:yz12f12.s1 /CLONE=IMAGE:282863 /UG=Hs.330988 Homo sapiens, Similar to Bicaudal D (Drosophila) homolog 1, clone IMAGE:3622452, mRNA, partial cds </td> <td> N45111 </td> <td> bicaudal D homolog 2 (Drosophila) </td> <td> BICD2 </td> <td> 23299 </td> <td> NM_001003800 /// NM_015250 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0072385 // minus-end-directed organelle transport along microtubule // inferred from sequence or structural similarity /// 0072393 // microtubule anchoring at microtubule organizing center // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from sequence or structural similarity </td> <td> 60.83 </td> <td> 124.96 </td> <td> 3.08 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 204275_at </td> <td> 204275_at </td> <td> AI796687 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI796687 /FEA=EST /DB_XREF=gi:5362150 /DB_XREF=est:wh59f02.x1 /CLONE=IMAGE:2385051 /UG=Hs.55836 small optic lobes (Drosophila) homolog /FL=gb:U85647.1 gb:NM_005632.1 </td> <td> AI796687 </td> <td> calpain 15 </td> <td> CAPN15 </td> <td> 6650 </td> <td> NM_005632 /// XM_005255514 /// XM_005255516 /// XM_005255517 /// XM_005255518 /// XM_006720931 /// XM_006720932 /// XM_006720933 /// XM_006720934 /// XM_006720935 </td> <td> 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006508 // proteolysis // not recorded </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // not recorded /// 0008233 // peptidase activity // traceable author statement /// 0008234 // cysteine-type peptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 36.80 </td> <td> 68.47 </td> <td> 3.07 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209389_x_at </td> <td> 209389_x_at </td> <td> M15887 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M15887.1 /DEF=Human endozepine (putative ligand of benzodiazepine receptor) mRNA, complete cds.  /FEA=mRNA /DB_XREF=gi:181960 /UG=Hs.78888 diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein) /FL=gb:M15887.1 </td> <td> M15887 </td> <td> diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) </td> <td> DBI </td> <td> 1622 </td> <td> NM_001079862 /// NM_001079863 /// NM_001178017 /// NM_001178041 /// NM_001178042 /// NM_001178043 /// NM_001282633 /// NM_001282634 /// NM_001282635 /// NM_001282636 /// NM_020548 /// NR_104221 </td> <td> 0001942 // hair follicle development // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0018345 // protein palmitoylation // inferred from direct assay /// 0036151 // phosphatidylcholine acyl-chain remodeling // inferred from direct assay /// 0043588 // skin development // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097038 // perinuclear endoplasmic reticulum // inferred from direct assay </td> <td> 0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0030156 // benzodiazepine receptor binding // traceable author statement /// 0036042 // long-chain fatty acyl-CoA binding // inferred from direct assay /// 0046983 // protein dimerization activity // inferred from direct assay </td> <td> 121.38 </td> <td> 763.29 </td> <td> 3.07 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218167_at </td> <td> 218167_at </td> <td> NM_016627 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016627.1 /DEF=Homo sapiens hypothetical protein (LOC51321), mRNA. /FEA=mRNA /GEN=LOC51321 /PROD=hypothetical protein /DB_XREF=gi:7706167 /UG=Hs.268122 hypothetical protein /FL=gb:AF208856.1 gb:NM_016627.1 </td> <td> NM_016627 </td> <td> archaelysin family metallopeptidase 2 </td> <td> AMZ2 </td> <td> 51321 </td> <td> NM_001033569 /// NM_001033570 /// NM_001033571 /// NM_001033572 /// NM_001033574 /// NM_001289054 /// NM_001289056 /// NM_016627 /// XM_005257432 /// XM_005257433 /// XM_005257435 /// XM_005257436 /// XM_005257437 /// XM_005257438 /// XM_006721940 </td> <td> 0006508 // proteolysis // inferred from electronic annotation </td> <td>  </td> <td> 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 49.33 </td> <td> 226.84 </td> <td> 3.07 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 214578_s_at </td> <td> 214578_s_at </td> <td> AV683882 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV683882 /FEA=EST /DB_XREF=gi:10285745 /DB_XREF=est:AV683882 /CLONE=GKCAIC05 /UG=Hs.17820 Rho-associated, coiled-coil containing protein kinase 1 /FL=gb:U43195.1 gb:NM_005406.1 </td> <td> AV683882 </td> <td> Rho-associated, coiled-coil containing protein kinase 1 </td> <td> ROCK1 </td> <td> 6093 </td> <td> NM_005406 </td> <td> 0003383 // apical constriction // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0006939 // smooth muscle contraction // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0022614 // membrane to membrane docking // inferred from direct assay /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // traceable author statement /// 0032060 // bleb assembly // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // traceable author statement /// 0032970 // regulation of actin filament-based process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045616 // regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0050900 // leukocyte migration // inferred from direct assay /// 0050901 // leukocyte tethering or rolling // inferred from direct assay /// 0051451 // myoblast migration // inferred from sequence or structural similarity /// 0051492 // regulation of stress fiber assembly // traceable author statement /// 0051893 // regulation of focal adhesion assembly // traceable author statement /// 0051894 // positive regulation of focal adhesion assembly // inferred from sequence or structural similarity /// 2000114 // regulation of establishment of cell polarity // traceable author statement /// 2000145 // regulation of cell motility // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0001726 // ruffle // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005814 // centriole // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0032059 // bleb // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -36.50 </td> <td> 134.62 </td> <td> -3.07 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203241_at </td> <td> 203241_at </td> <td> NM_003369 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003369.1 /DEF=Homo sapiens UV radiation resistance associated gene (UVRAG), mRNA. /FEA=mRNA /GEN=UVRAG /PROD=UV radiation resistance associated gene /DB_XREF=gi:4507860 /UG=Hs.13137 UV radiation resistance associated gene /FL=gb:NM_003369.1 gb:AB012958.1 </td> <td> NM_003369 </td> <td> UV radiation resistance associated </td> <td> UVRAG </td> <td> 7405 </td> <td> NM_003369 /// XM_005274209 /// XM_006718673 /// XM_006718674 /// XM_006718675 </td> <td> 0006281 // DNA repair // traceable author statement /// 0010508 // positive regulation of autophagy // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005764 // lysosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation </td> <td> -38.90 </td> <td> 161.65 </td> <td> -3.07 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 217790_s_at </td> <td> 217790_s_at </td> <td> NM_007107 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007107.1 /DEF=Homo sapiens signal sequence receptor, gamma (translocon-associated protein gamma) (SSR3), mRNA.  /FEA=mRNA /GEN=SSR3 /PROD=signal sequence receptor, gamma(translocon-associated protein gamma) /DB_XREF=gi:6005883 /UG=Hs.28707 signal sequence receptor, gamma (translocon-associated protein gamma) /FL=gb:AF110647.1 gb:NM_007107.1 </td> <td> NM_007107 </td> <td> signal sequence receptor, gamma (translocon-associated protein gamma) </td> <td> SSR3 </td> <td> 6747 </td> <td> NM_007107 </td> <td> 0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005784 // Sec61 translocon complex // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from electronic annotation </td> <td>  </td> <td> 46.47 </td> <td> 67.51 </td> <td> 3.07 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 205480_s_at </td> <td> 205480_s_at </td> <td> NM_006759 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006759.2 /DEF=Homo sapiens UDP-glucose pyrophosphorylase 2 (UGP2), mRNA. /FEA=mRNA /GEN=UGP2 /PROD=UDP-glucose pyrophosphorylase 2 /DB_XREF=gi:13027637 /UG=Hs.77837 UDP-glucose pyrophosphorylase 2 /FL=gb:NM_006759.2 </td> <td> NM_006759 </td> <td> UDP-glucose pyrophosphorylase 2 </td> <td> UGP2 </td> <td> 7360 </td> <td> NM_001001521 /// NM_006759 /// XM_005264537 /// XM_005264538 /// XM_006712088 /// XM_006712089 /// XR_426996 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0005978 // glycogen biosynthetic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006011 // UDP-glucose metabolic process // inferred from electronic annotation /// 0006065 // UDP-glucuronate biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // non-traceable author statement /// 0019255 // glucose 1-phosphate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0052695 // cellular glucuronidation // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003983 // UTP:glucose-1-phosphate uridylyltransferase activity // not recorded /// 0003983 // UTP:glucose-1-phosphate uridylyltransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005536 // glucose binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0032557 // pyrimidine ribonucleotide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -69.85 </td> <td> 436.75 </td> <td> -3.07 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 211998_at </td> <td> 211998_at </td> <td> AW138159 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW138159 /FEA=EST /DB_XREF=gi:6142559 /DB_XREF=est:UI-H-BI1-acy-d-03-0-UI.s1 /CLONE=IMAGE:2716060 /UG=Hs.180877 H3 histone, family 3B (H3.3B) /FL=gb:NM_005324.1 </td> <td> AW138159 </td> <td> H3 histone, family 3A /// H3 histone, family 3B (H3.3B) /// microRNA 4738 </td> <td> H3F3A /// H3F3B /// MIR4738 </td> <td> 3020 /// 3021 /// 100616282 </td> <td> NM_002107 /// NM_005324 /// NR_039892 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype </td> <td> 0000228 // nuclear chromosome // inferred from direct assay /// 0000786 // nucleosome // inferred from electronic annotation /// 0000788 // nuclear nucleosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 30.80 </td> <td> 59.02 </td> <td> 3.07 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 220597_s_at </td> <td> 220597_s_at </td> <td> NM_018694 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018694.1 /DEF=Homo sapiens HSVI binding protein (LOC55913), mRNA. /FEA=mRNA /GEN=LOC55913 /PROD=HSVI binding protein /DB_XREF=gi:8923906 /UG=Hs.306208 HSVI binding protein /FL=gb:AF267748.1 gb:NM_018694.1 </td> <td> NM_018694 </td> <td> ADP-ribosylation factor-like 6 interacting protein 4 </td> <td> ARL6IP4 </td> <td> 51329 </td> <td> NM_001002251 /// NM_001002252 /// NM_001278378 /// NM_001278379 /// NM_001278380 /// NM_016638 /// NM_018694 /// NR_103512 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 50.80 </td> <td> 161.80 </td> <td> 3.07 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208676_s_at </td> <td> 208676_s_at </td> <td> U87954 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U87954.1 /DEF=Human erbB3 binding protein EBP1 mRNA, complete cds. /FEA=mRNA /GEN=EBP1 /PROD=erbB3 binding protein EBP1 /DB_XREF=gi:4099505 /UG=Hs.5181 proliferation-associated 2G4, 38kD /FL=gb:BC001951.1 gb:U59435.1 gb:U87954.1 gb:NM_006191.1 </td> <td> U87954 </td> <td> proliferation-associated 2G4, 38kDa </td> <td> PA2G4 </td> <td> 5036 </td> <td> NM_006191 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0009987 // cellular process // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 66.48 </td> <td> 298.59 </td> <td> 3.07 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212013_at </td> <td> 212013_at </td> <td> D86983 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D86983.1 /DEF=Human mRNA for KIAA0230 gene, partial cds. /FEA=mRNA /GEN=KIAA0230 /DB_XREF=gi:1504039 /UG=Hs.118893 Melanoma associated gene </td> <td> D86983 </td> <td> peroxidasin homolog (Drosophila) </td> <td> PXDN </td> <td> 7837 </td> <td> NM_012293 /// XM_005264707 /// XM_006711896 </td> <td> 0001960 // negative regulation of cytokine-mediated signaling pathway // non-traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from direct assay /// 0042744 // hydrogen peroxide catabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay </td> <td> 0004601 // peroxidase activity // inferred from direct assay /// 0005152 // interleukin-1 receptor antagonist activity // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -160.65 </td> <td> 832.58 </td> <td> -3.06 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 204677_at </td> <td> 204677_at </td> <td> NM_001795 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001795.1 /DEF=Homo sapiens cadherin 5, type 2, VE-cadherin (vascular epithelium) (CDH5), mRNA.  /FEA=mRNA /GEN=CDH5 /PROD=cadherin 5, type 2, VE-cadherin (vascularepithelium) /DB_XREF=gi:4502726 /UG=Hs.76206 cadherin 5, type 2, VE-cadherin (vascular epithelium) /FL=gb:U84722.1 gb:NM_001795.1 gb:AB035304.1 </td> <td> NM_001795 </td> <td> cadherin 5, type 2 (vascular endothelium) </td> <td> CDH5 </td> <td> 1003 </td> <td> NM_001114117 /// NM_001795 </td> <td> 0001955 // blood vessel maturation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 2000114 // regulation of establishment of cell polarity // inferred from mutant phenotype </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from sequence or structural similarity /// 0071944 // cell periphery // inferred from electronic annotation </td> <td> 0005102 // receptor binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -532.85 </td> <td> 1726.30 </td> <td> -3.06 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212432_at </td> <td> 212432_at </td> <td> AL542571 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL542571 /FEA=EST /DB_XREF=gi:12874746 /DB_XREF=est:AL542571 /CLONE=CS0DE012YH08 (5 prime) /UG=Hs.151903 GrpE-like protein cochaperone </td> <td> AL542571 </td> <td> GrpE-like 1, mitochondrial (E. coli) </td> <td> GRPEL1 </td> <td> 80273 </td> <td> NM_025196 </td> <td> 0006457 // protein folding // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0030150 // protein import into mitochondrial matrix // non-traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from direct assay </td> <td> 0000774 // adenyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from electronic annotation </td> <td> -50.40 </td> <td> 296.07 </td> <td> -3.06 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201306_s_at </td> <td> 201306_s_at </td> <td> NM_006401 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006401.1 /DEF=Homo sapiens acidic protein rich in leucines (SSP29), mRNA. /FEA=mRNA /GEN=SSP29 /PROD=acidic protein rich in leucines /DB_XREF=gi:5454087 /UG=Hs.84264 acidic protein rich in leucines /FL=gb:U70439.1 gb:NM_006401.1 </td> <td> NM_006401 </td> <td> acidic (leucine-rich) nuclear phosphoprotein 32 family, member B </td> <td> ANP32B </td> <td> 10541 </td> <td> NM_006401 </td> <td> 0006334 // nucleosome assembly // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0045596 // negative regulation of cell differentiation // inferred from direct assay /// 0046827 // positive regulation of protein export from nucleus // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0042393 // histone binding // inferred from direct assay /// 0070063 // RNA polymerase binding // inferred from direct assay </td> <td> -250.15 </td> <td> 1170.38 </td> <td> -3.06 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201749_at </td> <td> 201749_at </td> <td> BF969352 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF969352 /FEA=EST /DB_XREF=gi:12336567 /DB_XREF=est:602271616F1 /CLONE=IMAGE:4359794 /UG=Hs.288203 endothelin converting enzyme 1 /FL=gb:NM_001397.1 gb:AB031742.1 gb:D49471.1 </td> <td> BF969352 </td> <td> endothelin converting enzyme 1 </td> <td> ECE1 </td> <td> 1889 </td> <td> NM_001113347 /// NM_001113348 /// NM_001113349 /// NM_001397 /// XM_006710398 </td> <td> 0001921 // positive regulation of receptor recycling // inferred from mutant phenotype /// 0003100 // regulation of systemic arterial blood pressure by endothelin // inferred by curator /// 0006508 // proteolysis // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0010814 // substance P catabolic process // inferred from direct assay /// 0010815 // bradykinin catabolic process // inferred from direct assay /// 0010816 // calcitonin catabolic process // inferred from direct assay /// 0016485 // protein processing // inferred from direct assay /// 0016486 // peptide hormone processing // inferred from direct assay /// 0019229 // regulation of vasoconstriction // inferred by curator /// 0034959 // endothelin maturation // inferred from direct assay /// 0042447 // hormone catabolic process // inferred from direct assay /// 0042733 // embryonic digit morphogenesis // inferred from mutant phenotype /// 0043583 // ear development // inferred from mutant phenotype /// 0060037 // pharyngeal system development // inferred from electronic annotation </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0031302 // intrinsic component of endosome membrane // traceable author statement /// 0031982 // vesicle // inferred from sequence or structural similarity /// 0033093 // Weibel-Palade body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017046 // peptide hormone binding // inferred by curator /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -81.88 </td> <td> 347.96 </td> <td> -3.06 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 219071_x_at </td> <td> 219071_x_at </td> <td> NM_016458 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016458.2 /DEF=Homo sapiens hypothetical protein (LOC51236), mRNA. /FEA=mRNA /GEN=LOC51236 /PROD=hypothetical protein MGC4355 /DB_XREF=gi:13124772 /UG=Hs.300224 hypothetical protein /FL=gb:BC003035.1 gb:NM_016458.2 </td> <td> NM_016458 </td> <td> HGH1 homolog (S. cerevisiae) </td> <td> HGH1 </td> <td> 51236 </td> <td> NM_016458 </td> <td>  </td> <td>  </td> <td> 0005488 // binding // inferred from electronic annotation </td> <td> 32.22 </td> <td> 199.41 </td> <td> 3.06 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 215749_s_at </td> <td> 215749_s_at </td> <td> AK001574 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001574.1 /DEF=Homo sapiens cDNA FLJ10712 fis, clone NT2RP3000919, highly similar to Rattus norvegicus golgi peripheral membrane protein p65 mRNA.  /FEA=mRNA /DB_XREF=gi:7022910 /UG=Hs.4291 hypothetical protein FLJ23443 </td> <td> AK001574 </td> <td> golgi reassembly stacking protein 1, 65kDa </td> <td> GORASP1 </td> <td> 64689 </td> <td> NM_001278789 /// NM_001278790 /// NM_031899 /// NR_103866 /// NR_103867 /// XM_006713300 /// XM_006713301 /// XM_006713302 /// XR_427284 /// XR_427285 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0050774 // negative regulation of dendrite morphogenesis // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 44.68 </td> <td> 89.41 </td> <td> 3.06 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 217822_at </td> <td> 217822_at </td> <td> NM_016312 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016312.1 /DEF=Homo sapiens Npw38-binding protein NpwBP (LOC51729), mRNA. /FEA=mRNA /GEN=LOC51729 /PROD=Npw38-binding protein NpwBP /DB_XREF=gi:7706500 /UG=Hs.16420 Npw38-binding protein NpwBP /FL=gb:BC001621.1 gb:AF118023.1 gb:AB029309.1 gb:NM_016312.1 </td> <td> NM_016312 </td> <td> WW domain binding protein 11 </td> <td> WBP11 </td> <td> 51729 </td> <td> NM_016312 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0003697 // single-stranded DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008599 // protein phosphatase type 1 regulator activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050699 // WW domain binding // inferred from physical interaction </td> <td> 49.80 </td> <td> 180.82 </td> <td> 3.06 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 207127_s_at </td> <td> 207127_s_at </td> <td> NM_021644 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021644.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein H3 (2H9) (HNRPH3), mRNA.  /FEA=mRNA /GEN=HNRPH3 /PROD=DKFZP586F0222 protein /DB_XREF=gi:11056058 /UG=Hs.279681 heterogeneous nuclear ribonucleoprotein H3 (2H9) /FL=gb:NM_021644.1 </td> <td> NM_021644 </td> <td> heterogeneous nuclear ribonucleoprotein H3 (2H9) </td> <td> HNRNPH3 </td> <td> 3189 </td> <td> NM_012207 /// NM_021644 /// XM_005269748 /// XM_005269749 /// XM_005269751 /// XM_005269752 /// XM_005269753 /// XM_005269754 /// XM_006717816 /// XM_006717817 </td> <td> 0000398 // mRNA splicing, via spliceosome // non-traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -40.88 </td> <td> 197.16 </td> <td> -3.06 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200763_s_at </td> <td> 200763_s_at </td> <td> NM_001003 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001003.1 /DEF=Homo sapiens ribosomal protein, large, P1 (RPLP1), mRNA. /FEA=mRNA /GEN=RPLP1 /PROD=ribosomal protein, large, P1 /DB_XREF=gi:4506668 /UG=Hs.177592 ribosomal protein, large, P1 /FL=gb:BC003369.1 gb:M17886.1 gb:NM_001003.1 </td> <td> NM_001003 </td> <td> ribosomal protein, large, P1 </td> <td> RPLP1 </td> <td> 6176 </td> <td> NM_001003 /// NM_213725 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -608.38 </td> <td> 3328.84 </td> <td> -3.05 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 213457_at </td> <td> 213457_at </td> <td> BF739959 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF739959 /FEA=EST /DB_XREF=gi:12066635 /DB_XREF=est:7o41e04.x1 /CLONE=IMAGE:3576678 /UG=Hs.24724 MFH-amplified sequences with leucine-rich tandem repeats 1 /FL=gb:AB016816.1 gb:NM_004225.1 </td> <td> BF739959 </td> <td> malignant fibrous histiocytoma amplified sequence 1 </td> <td> MFHAS1 </td> <td> 9258 </td> <td> NM_004225 /// XR_246634 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -45.37 </td> <td> 75.21 </td> <td> -3.05 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 211467_s_at </td> <td> 211467_s_at </td> <td> U70862 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U70862.1 /DEF=Human nuclear factor I B3 mRNA, complete cds. /FEA=mRNA /PROD=nuclear factor I B3 /DB_XREF=gi:1916623 /UG=Hs.33287 nuclear factor IB /FL=gb:U70862.1 </td> <td> U70862 </td> <td> nuclear factor I/B </td> <td> NFIB </td> <td> 4781 </td> <td> NM_001190737 /// NM_001190738 /// NM_001282787 /// NM_005596 /// XM_005251467 /// XM_005251468 /// XM_005251469 /// XM_005251470 /// XM_005251471 /// XM_006716773 /// XM_006716774 /// XM_006716775 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from sequence or structural similarity /// 0021740 // principal sensory nucleus of trigeminal nerve development // inferred from sequence or structural similarity /// 0021960 // anterior commissure morphogenesis // inferred from sequence or structural similarity /// 0030324 // lung development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060486 // Clara cell differentiation // inferred from sequence or structural similarity /// 0060509 // Type I pneumocyte differentiation // inferred from sequence or structural similarity /// 0060510 // Type II pneumocyte differentiation // inferred from sequence or structural similarity /// 0061141 // lung ciliated cell differentiation // inferred from sequence or structural similarity /// 0071679 // commissural neuron axon guidance // inferred from sequence or structural similarity /// 2000791 // negative regulation of mesenchymal cell proliferation involved in lung development // inferred from sequence or structural similarity /// 2000795 // negative regulation of epithelial cell proliferation involved in lung morphogenesis // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0044300 // cerebellar mossy fiber // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation </td> <td> 50.13 </td> <td> 101.99 </td> <td> 3.05 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 221700_s_at </td> <td> 221700_s_at </td> <td> AF348700 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF348700.1 /DEF=Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), mRNA, complete cds.  /FEA=mRNA /GEN=UBA52 /PROD=ubiquitin A-52 residue ribosomal protein fusionproduct 1 /DB_XREF=gi:13569611 /FL=gb:AF348700.1 </td> <td> AF348700 </td> <td> ubiquitin A-52 residue ribosomal protein fusion product 1 </td> <td> UBA52 </td> <td> 7311 </td> <td> NM_001033930 /// NM_003333 /// XM_005260050 /// XM_005260051 /// XM_005260052 /// XM_005260053 /// XM_005260054 /// XM_006722871 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005978 // glycogen biosynthetic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007144 // female meiosis I // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008585 // female gonad development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010992 // ubiquitin homeostasis // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019082 // viral protein processing // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0021888 // hypothalamus gonadotrophin-releasing hormone neuron development // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0032479 // regulation of type I interferon production // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060613 // fat pad development // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0071456 // cellular response to hypoxia // traceable author statement /// 0072520 // seminiferous tubule development // inferred from electronic annotation /// 0075733 // intracellular transport of virus // traceable author statement /// 0097009 // energy homeostasis // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -122.12 </td> <td> 1805.99 </td> <td> -3.05 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 221473_x_at </td> <td> 221473_x_at </td> <td> U49188 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U49188.1 /DEF=Human placenta (Diff33) mRNA, complete cds. /FEA=mRNA /GEN=Diff33 /DB_XREF=gi:1293562 /UG=Hs.272168 tumor differentially expressed 1 /FL=gb:U49188.1 gb:AF112227.1 gb:AF153979.1 gb:NM_006811.1 </td> <td> U49188 </td> <td> serine incorporator 3 </td> <td> SERINC3 </td> <td> 10955 </td> <td> NM_006811 /// NM_198941 </td> <td> 1902237 // positive regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -137.97 </td> <td> 280.79 </td> <td> -3.05 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 211317_s_at </td> <td> 211317_s_at </td> <td> AF041461 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF041461.1 /DEF=Homo sapiens I-FLICE isoform 4 mRNA, complete cds. /FEA=mRNA /PROD=I-FLICE isoform 4 /DB_XREF=gi:2827295 /UG=Hs.195175 CASP8 and FADD-like apoptosis regulator /FL=gb:AF041461.1 </td> <td> AF041461 </td> <td> CASP8 and FADD-like apoptosis regulator </td> <td> CFLAR </td> <td> 8837 </td> <td> NM_001127183 /// NM_001127184 /// NM_001202515 /// NM_001202516 /// NM_001202517 /// NM_001202518 /// NM_001202519 /// NM_003879 /// XM_005246935 /// XM_005246936 /// XM_005246937 /// XM_005246938 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from sequence or structural similarity /// 0014732 // skeletal muscle atrophy // inferred from sequence or structural similarity /// 0014842 // regulation of satellite cell proliferation // inferred from sequence or structural similarity /// 0014866 // skeletal myofibril assembly // inferred from sequence or structural similarity /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043403 // skeletal muscle tissue regeneration // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0060544 // regulation of necroptotic process // inferred from direct assay /// 0097190 // apoptotic signaling pathway // traceable author statement /// 1901740 // negative regulation of myoblast fusion // inferred from sequence or structural similarity /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0031264 // death-inducing signaling complex // inferred from direct assay /// 0031265 // CD95 death-inducing signaling complex // inferred from electronic annotation /// 0097342 // ripoptosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0004197 // cysteine-type endopeptidase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // inferred from direct assay /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0035877 // death effector domain binding // not recorded </td> <td> 54.52 </td> <td> 167.64 </td> <td> 3.05 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212586_at </td> <td> 212586_at </td> <td> AA195244 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA195244 /FEA=EST /DB_XREF=gi:1784944 /DB_XREF=est:zr36b02.s1 /CLONE=IMAGE:665451 /UG=Hs.247043 type 1 tumor necrosis factor receptor shedding aminopeptidase regulator </td> <td> AA195244 </td> <td> calpastatin </td> <td> CAST </td> <td> 831 </td> <td> NM_001042440 /// NM_001042441 /// NM_001042442 /// NM_001042443 /// NM_001042444 /// NM_001042445 /// NM_001042446 /// NM_001190442 /// NM_001284212 /// NM_001284213 /// NM_001750 /// NM_173060 /// NM_173061 /// NM_173062 /// NM_173063 /// NR_033798 /// NR_104285 /// XM_006714696 /// XM_006714697 /// XM_006714698 /// XM_006714699 /// XM_006714700 /// XM_006714701 /// XM_006714702 /// XM_006714703 /// XM_006714704 /// XM_006714705 /// XM_006714706 /// XM_006714707 /// XM_006714708 /// XM_006714709 /// XM_006714710 /// XM_006714711 /// XM_006714712 /// XM_006714713 /// XM_006714714 /// XM_006714715 </td> <td> 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement /// 2000675 // negative regulation of type B pancreatic cell apoptotic process // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0010859 // calcium-dependent cysteine-type endopeptidase inhibitor activity // non-traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 85.70 </td> <td> 375.25 </td> <td> 3.05 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 220948_s_at </td> <td> 220948_s_at </td> <td> NM_000701 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000701.1 /DEF=Homo sapiens ATPase, Na+K+ transporting, alpha 1 polypeptide (ATP1A1), mRNA.  /FEA=mRNA /GEN=ATP1A1 /PROD=ATPase, Na+K+ transporting, alpha 1polypeptide /DB_XREF=gi:4502268 /UG=Hs.76549 ATPase, Na+K+ transporting, alpha 1 polypeptide /FL=gb:NM_000701.1 gb:U16798.1 </td> <td> NM_000701 </td> <td> ATPase, Na+/K+ transporting, alpha 1 polypeptide </td> <td> ATP1A1 </td> <td> 476 </td> <td> NM_000701 /// NM_001001586 /// NM_001160233 /// NM_001160234 /// XM_006710655 </td> <td> 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0010107 // potassium ion import // inferred from electronic annotation /// 0015672 // monovalent inorganic cation transport // inferred from electronic annotation /// 0031947 // negative regulation of glucocorticoid biosynthetic process // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from sequence or structural similarity /// 0035725 // sodium ion transmembrane transport // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0045822 // negative regulation of heart contraction // inferred from electronic annotation /// 0045823 // positive regulation of heart contraction // inferred from electronic annotation /// 0045989 // positive regulation of striated muscle contraction // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060081 // membrane hyperpolarization // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0086004 // regulation of cardiac muscle cell contraction // inferred from electronic annotation </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005890 // sodium:potassium-exchanging ATPase complex // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005391 // sodium:potassium-exchanging ATPase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015077 // monovalent inorganic cation transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0019829 // cation-transporting ATPase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from electronic annotation /// 0030955 // potassium ion binding // inferred from electronic annotation /// 0031402 // sodium ion binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from sequence or structural similarity </td> <td> -129.80 </td> <td> 472.02 </td> <td> -3.04 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200996_at </td> <td> 200996_at </td> <td> NM_005721 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005721.2 /DEF=Homo sapiens ARP3 (actin-related protein 3, yeast) homolog (ACTR3), mRNA.  /FEA=mRNA /GEN=ACTR3 /PROD=ARP3 (actin-related protein 3, yeast) homolog /DB_XREF=gi:7262289 /UG=Hs.5321 ARP3 (actin-related protein 3, yeast) homolog /FL=gb:AF006083.1 gb:NM_005721.2 </td> <td> NM_005721 </td> <td> ARP3 actin-related protein 3 homolog (yeast) </td> <td> ACTR3 </td> <td> 10096 </td> <td> NM_001277140 /// NM_005721 /// NR_102318 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0008356 // asymmetric cell division // inferred from electronic annotation /// 0009743 // response to carbohydrate // inferred from electronic annotation /// 0010592 // positive regulation of lamellipodium assembly // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0033206 // meiotic cytokinesis // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043519 // regulation of myosin II filament organization // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051321 // meiotic cell cycle // inferred from electronic annotation /// 0051491 // positive regulation of filopodium assembly // inferred from electronic annotation /// 0051653 // spindle localization // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0002102 // podosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> -101.60 </td> <td> 965.42 </td> <td> -3.04 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208852_s_at </td> <td> 208852_s_at </td> <td> AI761759 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI761759 /FEA=EST /DB_XREF=gi:5177515 /DB_XREF=est:wg67h12.x1 /CLONE=IMAGE:2370215 /UG=Hs.155560 calnexin /FL=gb:NM_001746.1 gb:BC003552.1 gb:M94859.1 gb:M98452.1 gb:L10284.1 gb:L18887.1 </td> <td> AI761759 </td> <td> calnexin </td> <td> CANX </td> <td> 821 </td> <td> NM_001024649 /// NM_001746 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0009306 // protein secretion // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048488 // synaptic vesicle endocytosis // inferred from sequence or structural similarity /// 0061077 // chaperone-mediated protein folding // inferred from electronic annotation /// 0072583 // clathrin-mediated endocytosis // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0001948 // glycoprotein binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0034185 // apolipoprotein binding // inferred from electronic annotation /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -286.83 </td> <td> 1055.94 </td> <td> -3.04 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209187_at </td> <td> 209187_at </td> <td> AW516932 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW516932 /FEA=EST /DB_XREF=gi:7154941 /DB_XREF=est:xq04a05.x1 /CLONE=IMAGE:2748848 /UG=Hs.16697 down-regulator of transcription 1, TBP-binding (negative cofactor 2) /FL=gb:BC002809.1 </td> <td> AW516932 </td> <td> down-regulator of transcription 1, TBP-binding (negative cofactor 2) </td> <td> DR1 </td> <td> 1810 </td> <td> NM_001938 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay </td> <td> 0003677 // DNA binding // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0017025 // TBP-class protein binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 28.48 </td> <td> 133.51 </td> <td> 3.04 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 215458_s_at </td> <td> 215458_s_at </td> <td> AF199364 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF199364.2 /DEF=Homo sapiens E3 ubiquitin ligase SMURF1 mRNA, partial cds. /FEA=mRNA /PROD=E3 ubiquitin ligase SMURF1 /DB_XREF=gi:6446605 /UG=Hs.119120 E3 ubiquitin ligase SMURF1 </td> <td> AF199364 </td> <td> SMAD specific E3 ubiquitin protein ligase 1 </td> <td> SMURF1 </td> <td> 57154 </td> <td> NM_001199847 /// NM_020429 /// NM_181349 /// XM_005250507 /// XM_006716061 /// XM_006716062 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006611 // protein export from nucleus // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007398 // ectoderm development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030154 // cell differentiation // inferred from direct assay /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030514 // negative regulation of BMP signaling pathway // traceable author statement /// 0030579 // ubiquitin-dependent SMAD protein catabolic process // inferred from direct assay /// 0032801 // receptor catabolic process // inferred from direct assay /// 0034394 // protein localization to cell surface // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay </td> <td> 0005634 // nucleus // not recorded /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0048185 // activin binding // non-traceable author statement /// 0070411 // I-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction </td> <td> -39.95 </td> <td> 65.50 </td> <td> -3.04 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209380_s_at </td> <td> 209380_s_at </td> <td> AF146074 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF146074.1 /DEF=Homo sapiens ABC protein mRNA, complete cds. /FEA=mRNA /PROD=ABC protein /DB_XREF=gi:5006890 /UG=Hs.108660 ATP-binding cassette, sub-family C (CFTRMRP), member 5 /FL=gb:AF104942.1 gb:AB019002.1 gb:AF146074.1 gb:NM_005688.1 gb:U83661.2 </td> <td> AF146074 </td> <td> ATP-binding cassette, sub-family C (CFTR/MRP), member 5 </td> <td> ABCC5 </td> <td> 10057 </td> <td> NM_001023587 /// NM_005688 /// XM_005247058 /// XM_005247059 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015711 // organic anion transport // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030212 // hyaluronan metabolic process // traceable author statement /// 0030213 // hyaluronan biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008514 // organic anion transmembrane transporter activity // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation </td> <td> 38.95 </td> <td> 124.03 </td> <td> 3.04 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201821_s_at </td> <td> 201821_s_at </td> <td> BC004439 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004439.1 /DEF=Homo sapiens, translocase of inner mitochondrial membrane 17 (yeast) homolog A, clone MGC:4031, mRNA, complete cds.  /FEA=mRNA /PROD=translocase of inner mitochondrial membrane 17(yeast) homolog A /DB_XREF=gi:13325239 /UG=Hs.20716 translocase of inner mitochondrial membrane 17 (yeast) homolog A /FL=gb:BC004439.1 gb:AF106622.1 gb:NM_006335.1 </td> <td> BC004439 </td> <td> translocase of inner mitochondrial membrane 17 homolog A (yeast) </td> <td> TIMM17A </td> <td> 10440 </td> <td> NM_006335 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071806 // protein transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031305 // integral component of mitochondrial inner membrane // inferred from direct assay </td> <td> 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation </td> <td> 106.23 </td> <td> 332.26 </td> <td> 3.04 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 217718_s_at </td> <td> 217718_s_at </td> <td> NM_014052 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014052.1 /DEF=Homo sapiens GW128 protein (GW128), mRNA. /FEA=mRNA /GEN=GW128 /PROD=GW128 protein /DB_XREF=gi:7661715 /UG=Hs.182238 GW128 protein /FL=gb:AF107406.1 gb:NM_014052.1 </td> <td> NM_014052 </td> <td> tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta </td> <td> YWHAB </td> <td> 7529 </td> <td> NM_003404 /// NM_139323 </td> <td> 0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0006605 // protein targeting // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0035308 // negative regulation of protein dephosphorylation // inferred from direct assay /// 0035329 // hippo signaling // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051220 // cytoplasmic sequestering of protein // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0050815 // phosphoserine binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from physical interaction </td> <td> 147.10 </td> <td> 1373.95 </td> <td> 3.04 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209179_s_at </td> <td> 209179_s_at </td> <td> BC003164 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003164.1 /DEF=Homo sapiens, clone MGC:4221, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:4221) /DB_XREF=gi:13111982 /UG=Hs.78768 malignant cell expression-enhanced genetumor progression-enhanced gene /FL=gb:BC002512.1 gb:BC003164.1 </td> <td> BC003164 </td> <td> membrane bound O-acyltransferase domain containing 7 </td> <td> MBOAT7 </td> <td> 79143 </td> <td> NM_001146056 /// NM_001146082 /// NM_001146083 /// NM_024298 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0021591 // ventricular system development // inferred from electronic annotation /// 0036149 // phosphatidylinositol acyl-chain remodeling // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation </td> <td> 85.02 </td> <td> 193.21 </td> <td> 3.04 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201947_s_at </td> <td> 201947_s_at </td> <td> NM_006431 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006431.1 /DEF=Homo sapiens chaperonin containing TCP1, subunit 2 (beta) (CCT2), mRNA.  /FEA=mRNA /GEN=CCT2 /PROD=chaperonin containing TCP1, subunit 2 (beta) /DB_XREF=gi:5453602 /UG=Hs.6456 chaperonin containing TCP1, subunit 2 (beta) /FL=gb:AF026293.1 gb:AF026166.1 gb:NM_006431.1 </td> <td> NM_006431 </td> <td> chaperonin containing TCP1, subunit 2 (beta) </td> <td> CCT2 </td> <td> 10576 </td> <td> NM_001198842 /// NM_006431 </td> <td> 0006457 // protein folding // non-traceable author statement /// 0006457 // protein folding // traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051131 // chaperone-mediated protein complex assembly // inferred from mutant phenotype </td> <td> 0002199 // zona pellucida receptor complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement </td> <td> 134.13 </td> <td> 883.06 </td> <td> 3.04 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200074_s_at </td> <td> 200074_s_at </td> <td> U16738 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U16738.1 /DEF=Homo sapiens CAG-isl 7 mRNA, complete cds. /FEA=mRNA /PROD=CAG-isl 7 /DB_XREF=gi:608516 /UG=Hs.738 ribosomal protein L14 /FL=gb:U16738.1 </td> <td> U16738 </td> <td> ribosomal protein L14 </td> <td> RPL14 </td> <td> 9045 </td> <td> NM_001034996 /// NM_003973 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042273 // ribosomal large subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -265.92 </td> <td> 1612.06 </td> <td> -3.03 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212434_at </td> <td> 212434_at </td> <td> AI984421 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI984421 /FEA=EST /DB_XREF=gi:5811698 /DB_XREF=est:wr89a12.x1 /CLONE=IMAGE:2494846 /UG=Hs.151903 GrpE-like protein cochaperone </td> <td> AI984421 </td> <td> GrpE-like 1, mitochondrial (E. coli) </td> <td> GRPEL1 </td> <td> 80273 </td> <td> NM_025196 </td> <td> 0006457 // protein folding // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0030150 // protein import into mitochondrial matrix // non-traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from direct assay </td> <td> 0000774 // adenyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from electronic annotation </td> <td> -76.25 </td> <td> 251.28 </td> <td> -3.03 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 204067_at </td> <td> 204067_at </td> <td> AA129776 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA129776 /FEA=EST /DB_XREF=gi:1690187 /DB_XREF=est:zl16h11.s1 /CLONE=IMAGE:502149 /UG=Hs.16340 sulfite oxidase /FL=gb:NM_000456.1 gb:L31573.1 </td> <td> AA129776 </td> <td> sulfite oxidase </td> <td> SUOX </td> <td> 6821 </td> <td> NM_000456 /// NM_001032386 /// NM_001032387 /// XM_005269112 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0000098 // sulfur amino acid catabolic process // traceable author statement /// 0006790 // sulfur compound metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070221 // sulfide oxidation, using sulfide:quinone oxidoreductase // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0008482 // sulfite oxidase activity // traceable author statement /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0030151 // molybdenum ion binding // inferred from electronic annotation /// 0043546 // molybdopterin cofactor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 43.40 </td> <td> 70.22 </td> <td> 3.03 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202841_x_at </td> <td> 202841_x_at </td> <td> NM_007346 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007346.1 /DEF=Homo sapiens 7-60 protein (7-60), mRNA. /FEA=mRNA /GEN=7-60 /PROD=7-60 protein /DB_XREF=gi:6671492 /UG=Hs.67896 7-60 protein /FL=gb:AF109134.1 gb:NM_007346.1 gb:AF172451.1 </td> <td> NM_007346 </td> <td> opioid growth factor receptor </td> <td> OGFR </td> <td> 11054 </td> <td> NM_007346 </td> <td> 0001558 // regulation of cell growth // non-traceable author statement /// 0038003 // opioid receptor signaling pathway // non-traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // inferred from electronic annotation /// 0004985 // opioid receptor activity // non-traceable author statement </td> <td> -33.47 </td> <td> 113.74 </td> <td> -3.03 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 204863_s_at </td> <td> 204863_s_at </td> <td> BE856546 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE856546 /FEA=EST /DB_XREF=gi:10369675 /DB_XREF=est:7f64a11.x1 /CLONE=IMAGE:3299420 /UG=Hs.82065 interleukin 6 signal transducer (gp130, oncostatin M receptor) /FL=gb:M57230.1 gb:NM_002184.1 </td> <td> BE856546 </td> <td> interleukin 6 signal transducer </td> <td> IL6ST </td> <td> 3572 </td> <td> NM_001190981 /// NM_002184 /// NM_175767 /// NR_120480 /// XM_005248496 </td> <td> 0002675 // positive regulation of acute inflammatory response // inferred by curator /// 0002821 // positive regulation of adaptive immune response // inferred by curator /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008593 // regulation of Notch signaling pathway // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0034097 // response to cytokine // inferred from direct assay /// 0038154 // interleukin-11-mediated signaling pathway // inferred from electronic annotation /// 0038165 // oncostatin-M-mediated signaling pathway // inferred from mutant phenotype /// 0042102 // positive regulation of T cell proliferation // inferred from mutant phenotype /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048861 // leukemia inhibitory factor signaling pathway // inferred from genetic interaction /// 0070102 // interleukin-6-mediated signaling pathway // inferred from mutant phenotype /// 0070104 // negative regulation of interleukin-6-mediated signaling pathway // inferred from direct assay /// 0070106 // interleukin-27-mediated signaling pathway // inferred from mutant phenotype /// 0070120 // ciliary neurotrophic factor-mediated signaling pathway // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005896 // interleukin-6 receptor complex // inferred from direct assay /// 0005900 // oncostatin-M receptor complex // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070110 // ciliary neurotrophic factor receptor complex // inferred from direct assay </td> <td> 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004897 // ciliary neurotrophic factor receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from genetic interaction /// 0004921 // interleukin-11 receptor activity // inferred from electronic annotation /// 0004923 // leukemia inhibitory factor receptor activity // inferred from genetic interaction /// 0004924 // oncostatin-M receptor activity // inferred from direct assay /// 0005127 // ciliary neurotrophic factor receptor binding // inferred from physical interaction /// 0005138 // interleukin-6 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from physical interaction /// 0019970 // interleukin-11 binding // inferred from electronic annotation /// 0019981 // interleukin-6 binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // traceable author statement /// 0045509 // interleukin-27 receptor activity // inferred by curator </td> <td> -154.43 </td> <td> 285.59 </td> <td> -3.03 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201899_s_at </td> <td> 201899_s_at </td> <td> NM_003336 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003336.1 /DEF=Homo sapiens ubiquitin-conjugating enzyme E2A (RAD6 homolog) (UBE2A), mRNA.  /FEA=mRNA /GEN=UBE2A /PROD=ubiquitin-conjugating enzyme E2A (RAD6 homolog) /DB_XREF=gi:4507768 /UG=Hs.80612 ubiquitin-conjugating enzyme E2A (RAD6 homolog) /FL=gb:M74524.1 gb:NM_003336.1 </td> <td> NM_003336 </td> <td> ubiquitin-conjugating enzyme E2A </td> <td> UBE2A </td> <td> 7319 </td> <td> NM_001282161 /// NM_003336 /// NM_181762 /// NM_181777 </td> <td> 0000209 // protein polyubiquitination // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006281 // DNA repair // inferred from genetic interaction /// 0006301 // postreplication repair // non-traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0009411 // response to UV // inferred from genetic interaction /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0033522 // histone H2A ubiquitination // inferred from direct assay /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0000785 // chromatin // inferred from sequence or structural similarity /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0001741 // XY body // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0033503 // HULC complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> 69.52 </td> <td> 302.41 </td> <td> 3.03 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 214141_x_at </td> <td> 214141_x_at </td> <td> BF033354 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF033354 /FEA=EST /DB_XREF=gi:10741066 /DB_XREF=est:601458055F1 /CLONE=IMAGE:3861709 /UG=Hs.184167 splicing factor, arginineserine-rich 7 (35kD) </td> <td> BF033354 </td> <td> serine/arginine-rich splicing factor 7 </td> <td> SRSF7 </td> <td> 6432 </td> <td> NM_001031684 /// NM_001195446 /// NM_006276 /// XM_005264484 /// XM_005264485 /// XM_005264486 /// XR_426994 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 122.67 </td> <td> 729.26 </td> <td> 3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201251_at </td> <td> 201251_at </td> <td> NM_002654 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002654.1 /DEF=Homo sapiens pyruvate kinase, muscle (PKM2), mRNA. /FEA=mRNA /GEN=PKM2 /PROD=pyruvate kinase, muscle /DB_XREF=gi:4505838 /UG=Hs.198281 pyruvate kinase, muscle /FL=gb:BC000481.1 gb:M23725.1 gb:M26252.1 gb:NM_002654.1 </td> <td> NM_002654 </td> <td> pyruvate kinase, muscle </td> <td> PKM </td> <td> 5315 </td> <td> NM_001206796 /// NM_001206797 /// NM_001206798 /// NM_001206799 /// NM_002654 /// NM_182470 /// NM_182471 /// XM_005254443 /// XM_005254445 /// XM_006720570 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0012501 // programmed cell death // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004743 // pyruvate kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0023026 // MHC class II protein complex binding // inferred from direct assay /// 0030955 // potassium ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -158.90 </td> <td> 1333.00 </td> <td> -3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 205546_s_at </td> <td> 205546_s_at </td> <td> NM_003331 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003331.1 /DEF=Homo sapiens tyrosine kinase 2 (TYK2), mRNA. /FEA=mRNA /GEN=TYK2 /PROD=tyrosine kinase 2 /DB_XREF=gi:4507748 /UG=Hs.75516 tyrosine kinase 2 /FL=gb:NM_003331.1 </td> <td> NM_003331 </td> <td> tyrosine kinase 2 </td> <td> TYK2 </td> <td> 7297 </td> <td> NM_003331 </td> <td> 0006468 // protein phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005131 // growth hormone receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031702 // type 1 angiotensin receptor binding // inferred from electronic annotation </td> <td> -35.75 </td> <td> 113.92 </td> <td> -3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202109_at </td> <td> 202109_at </td> <td> NM_012402 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012402.1 /DEF=Homo sapiens partner of RAC1 (arfaptin 2) (POR1), mRNA. /FEA=mRNA /GEN=POR1 /PROD=partner of RAC1 (arfaptin 2) /DB_XREF=gi:6912601 /UG=Hs.75139 partner of RAC1 (arfaptin 2) /FL=gb:BC000392.1 gb:U52522.1 gb:NM_012402.1 </td> <td> NM_012402 </td> <td> ADP-ribosylation factor interacting protein 2 </td> <td> ARFIP2 </td> <td> 23647 </td> <td> NM_001242854 /// NM_001242855 /// NM_001242856 /// NM_012402 /// XM_005252840 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0030032 // lamellipodium assembly // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from mutant phenotype /// 0031529 // ruffle organization // traceable author statement </td> <td> 0001726 // ruffle // inferred from mutant phenotype /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030742 // GTP-dependent protein binding // inferred from physical interaction /// 0030742 // GTP-dependent protein binding // traceable author statement /// 0048365 // Rac GTPase binding // traceable author statement </td> <td> 32.43 </td> <td> 163.84 </td> <td> 3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200652_at </td> <td> 200652_at </td> <td> NM_003145 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003145.2 /DEF=Homo sapiens signal sequence receptor, beta (translocon-associated protein beta) (SSR2), mRNA.  /FEA=mRNA /GEN=SSR2 /PROD=signal sequence receptor, beta precursor /DB_XREF=gi:6552341 /UG=Hs.74564 signal sequence receptor, beta (translocon-associated protein beta) /FL=gb:D37991.1 gb:BC000341.1 gb:NM_003145.2 </td> <td> NM_003145 </td> <td> signal sequence receptor, beta (translocon-associated protein beta) </td> <td> SSR2 </td> <td> 6746 </td> <td> NM_003145 </td> <td> 0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 84.02 </td> <td> 742.26 </td> <td> 3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208713_at </td> <td> 208713_at </td> <td> BF724216 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF724216 /FEA=EST /DB_XREF=gi:12040125 /DB_XREF=est:bx02c06.y1 /CLONE=bx02c06 /UG=Hs.155218 E1B-55kDa-associated protein 5 /FL=gb:BC002564.1 gb:NM_007040.1 </td> <td> BF724216 </td> <td> heterogeneous nuclear ribonucleoprotein U-like 1 </td> <td> HNRNPUL1 </td> <td> 11100 </td> <td> NM_007040 /// NM_144732 /// NM_144733 /// NM_144734 /// XM_005258459 /// XM_005258461 /// XM_005258462 /// XM_005258463 /// XM_005258464 /// XM_005258465 /// XM_005258466 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 93.07 </td> <td> 324.19 </td> <td> 3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 221691_x_at </td> <td> 221691_x_at </td> <td> AB042278 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB042278.1 /DEF=Homo sapiens mRNA for nucleophosminB23.2, complete cds. /FEA=mRNA /PROD=nucleophosminB23.2 /DB_XREF=gi:13536990 /FL=gb:AB042278.1 </td> <td> AB042278 </td> <td> nucleophosmin (nucleolar phosphoprotein B23, numatrin) </td> <td> NPM1 </td> <td> 4869 </td> <td> NM_001037738 /// NM_002520 /// NM_199185 /// XM_005265920 /// XM_006714869 </td> <td> 0006281 // DNA repair // inferred from direct assay /// 0006334 // nucleosome assembly // inferred from direct assay /// 0006334 // nucleosome assembly // traceable author statement /// 0006886 // intracellular protein transport // traceable author statement /// 0006913 // nucleocytoplasmic transport // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // traceable author statement /// 0006950 // response to stress // inferred from mutant phenotype /// 0007098 // centrosome cycle // inferred from mutant phenotype /// 0007098 // centrosome cycle // inferred from sequence or structural similarity /// 0007165 // signal transduction // non-traceable author statement /// 0007569 // cell aging // inferred from mutant phenotype /// 0007569 // cell aging // inferred from sequence or structural similarity /// 0008104 // protein localization // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0010826 // negative regulation of centrosome duplication // inferred from mutant phenotype /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032071 // regulation of endodeoxyribonuclease activity // inferred from direct assay /// 0034080 // centromere-specific nucleosome assembly // traceable author statement /// 0042255 // ribosome assembly // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 0044387 // negative regulation of protein kinase activity by regulation of protein phosphorylation // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay /// 0046599 // regulation of centriole replication // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051259 // protein oligomerization // inferred from direct assay /// 0060699 // regulation of endoribonuclease activity // inferred from direct assay /// 0060735 // regulation of eIF2 alpha phosphorylation by dsRNA // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0031616 // spindle pole centrosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003723 // RNA binding // inferred from direct assay /// 0004860 // protein kinase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030957 // Tat protein binding // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043023 // ribosomal large subunit binding // inferred from direct assay /// 0043024 // ribosomal small subunit binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from mutant phenotype /// 0051059 // NF-kappaB binding // inferred from direct assay /// 0051059 // NF-kappaB binding // inferred from sequence or structural similarity /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from sequence or structural similarity </td> <td> -320.42 </td> <td> 1637.11 </td> <td> -3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 219777_at </td> <td> 219777_at </td> <td> NM_024711 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024711.1 /DEF=Homo sapiens hypothetical protein FLJ22690 (FLJ22690), mRNA. /FEA=mRNA /GEN=FLJ22690 /PROD=hypothetical protein FLJ22690 /DB_XREF=gi:13376008 /UG=Hs.105468 hypothetical protein FLJ22690 /FL=gb:NM_024711.1 </td> <td> NM_024711 </td> <td> GTPase, IMAP family member 6 </td> <td> GIMAP6 </td> <td> 474344 </td> <td> NM_001007224 /// NM_001244071 /// NM_001244072 /// NM_024711 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 96.65 </td> <td> 179.95 </td> <td> 3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 217727_x_at </td> <td> 217727_x_at </td> <td> NM_018206 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018206.1 /DEF=Homo sapiens vacuolar protein sorting 35 (yeast homolog) (VPS35), mRNA.  /FEA=mRNA /GEN=VPS35 /PROD=vacuolar protein sorting 35 (yeast homolog) /DB_XREF=gi:8922645 /UG=Hs.264190 vacuolar protein sorting 35 (yeast homolog) /FL=gb:AF186382.1 gb:AL136888.1 gb:BC002414.1 gb:AF191298.2 gb:NM_018206.1 gb:AF175265.1 gb:AF183418.1 </td> <td> NM_018206 </td> <td> vacuolar protein sorting 35 homolog (S. cerevisiae) </td> <td> VPS35 </td> <td> 55737 </td> <td> NM_018206 /// XM_005256045 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // non-traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030904 // retromer complex // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 65.10 </td> <td> 389.95 </td> <td> 3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 213234_at </td> <td> 213234_at </td> <td> AB040900 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB040900.1 /DEF=Homo sapiens mRNA for KIAA1467 protein, partial cds. /FEA=mRNA /GEN=KIAA1467 /PROD=KIAA1467 protein /DB_XREF=gi:7959194 /UG=Hs.6189 KIAA1467 protein </td> <td> AB040900 </td> <td> KIAA1467 </td> <td> KIAA1467 </td> <td> 57613 </td> <td> NM_020853 /// XM_005253450 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 42.75 </td> <td> 64.03 </td> <td> 3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208824_x_at </td> <td> 208824_x_at </td> <td> BC001048 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001048.1 /DEF=Homo sapiens, PCTAIRE protein kinase 1, clone MGC:1330, mRNA, complete cds.  /FEA=mRNA /PROD=PCTAIRE protein kinase 1 /DB_XREF=gi:12654444 /UG=Hs.171834 PCTAIRE protein kinase 1 /FL=gb:BC001048.1 </td> <td> BC001048 </td> <td> cyclin-dependent kinase 16 </td> <td> CDK16 </td> <td> 5127 </td> <td> NM_001170460 /// NM_006201 /// NM_033018 /// XM_005272614 /// XM_005272615 /// XM_006724534 /// XM_006724535 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006887 // exocytosis // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030252 // growth hormone secretion // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0061178 // regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -42.50 </td> <td> 186.43 </td> <td> -3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209124_at </td> <td> 209124_at </td> <td> U70451 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U70451.1 /DEF=Human myleoid differentiation primary response protein MyD88 mRNA, complete cds.  /FEA=mRNA /PROD=MyD88 /DB_XREF=gi:1763090 /UG=Hs.82116 myeloid differentiation primary response gene (88) /FL=gb:U70451.1 gb:U84408.1 gb:NM_002468.1 </td> <td> U70451 </td> <td> myeloid differentiation primary response 88 </td> <td> MYD88 </td> <td> 4615 </td> <td> NM_001172566 /// NM_001172567 /// NM_001172568 /// NM_001172569 /// NM_002468 /// XM_005265172 /// XM_006713170 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002238 // response to molecule of fungal origin // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007254 // JNK cascade // inferred from electronic annotation /// 0008063 // Toll signaling pathway // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0016064 // immunoglobulin mediated immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032494 // response to peptidoglycan // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032740 // positive regulation of interleukin-17 production // inferred from sequence or structural similarity /// 0032747 // positive regulation of interleukin-23 production // inferred from sequence or structural similarity /// 0032755 // positive regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0044130 // negative regulation of growth of symbiont in host // inferred from electronic annotation /// 0045080 // positive regulation of chemokine biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045351 // type I interferon biosynthetic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050671 // positive regulation of lymphocyte proliferation // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from sequence or structural similarity /// 0050830 // defense response to Gram-positive bacterium // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from mutant phenotype /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0005102 // receptor binding // inferred from electronic annotation /// 0005121 // Toll binding // inferred from electronic annotation /// 0005123 // death receptor binding // traceable author statement /// 0005149 // interleukin-1 receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0070976 // TIR domain binding // inferred from physical interaction </td> <td> 40.68 </td> <td> 329.21 </td> <td> 3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203740_at </td> <td> 203740_at </td> <td> NM_005792 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005792.1 /DEF=Homo sapiens M-phase phosphoprotein 6 (MPHOSPH6), mRNA. /FEA=mRNA /GEN=MPHOSPH6 /PROD=M-phase phosphoprotein 6 /DB_XREF=gi:5031918 /UG=Hs.152720 M-phase phosphoprotein 6 /FL=gb:BC005242.1 gb:NM_005792.1 </td> <td> NM_005792 </td> <td> M-phase phosphoprotein 6 </td> <td> MPHOSPH6 </td> <td> 10200 </td> <td> NM_005792 </td> <td> 0000087 // mitotic M phase // traceable author statement /// 0000460 // maturation of 5.8S rRNA // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from electronic annotation </td> <td> 0000176 // nuclear exosome (RNase complex) // traceable author statement /// 0000178 // exosome (RNase complex) // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 60.65 </td> <td> 224.15 </td> <td> 3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 202121_s_at </td> <td> 202121_s_at </td> <td> NM_014453 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014453.1 /DEF=Homo sapiens putative breast adenocarcinoma marker (32kD) (BC-2), mRNA.  /FEA=mRNA /GEN=BC-2 /PROD=putative breast adenocarcinoma marker (32kD) /DB_XREF=gi:7656921 /UG=Hs.12107 putative breast adenocarcinoma marker (32kD) /FL=gb:AF042384.1 gb:NM_014453.1 </td> <td> NM_014453 </td> <td> charged multivesicular body protein 2A </td> <td> CHMP2A </td> <td> 27243 </td> <td> NM_014453 /// NM_198426 /// XM_005258746 /// XM_005258747 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0045184 // establishment of protein localization // inferred from mutant phenotype /// 0050792 // regulation of viral process // inferred from mutant phenotype /// 0061024 // membrane organization // traceable author statement /// 1902188 // positive regulation of viral release from host cell // inferred from mutant phenotype </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction </td> <td> -34.90 </td> <td> 195.60 </td> <td> -3.02 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200603_at </td> <td> 200603_at </td> <td> AL050038 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL050038.1 /DEF=Homo sapiens mRNA; cDNA DKFZp566J0124 (from clone DKFZp566J0124). /FEA=mRNA /DB_XREF=gi:4884279 /UG=Hs.183037 protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) /FL=gb:M18468.1 gb:M33336.1 gb:NM_002734.1 </td> <td> AL050038 </td> <td> protein kinase, cAMP-dependent, regulatory, type I, alpha </td> <td> PRKAR1A </td> <td> 5573 </td> <td> NM_001276289 /// NM_001276290 /// NM_001278433 /// NM_002734 /// NM_212471 /// NM_212472 </td> <td> 0001707 // mesoderm formation // inferred from electronic annotation /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007143 // female meiotic division // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045835 // negative regulation of meiosis // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060038 // cardiac muscle cell proliferation // inferred from electronic annotation /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 2000480 // negative regulation of cAMP-dependent protein kinase activity // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005952 // cAMP-dependent protein kinase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031588 // AMP-activated protein kinase complex // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0034236 // protein kinase A catalytic subunit binding // inferred from physical interaction </td> <td> 180.37 </td> <td> 719.59 </td> <td> 3.01 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208149_x_at </td> <td> 208149_x_at </td> <td> NM_030653 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030653.1 /DEF=Homo sapiens DEADH (Asp-Glu-Ala-AspHis) box polypeptide 11 (S.cerevisiae CHL1-like helicase) (DDX11), transcript variant 1, mRNA.  /FEA=mRNA /GEN=DDX11 /PROD=DEADH (Asp-Glu-Ala-AspHis) box polypeptide 11 /DB_XREF=gi:13787196 /FL=gb:NM_030653.1 </td> <td> NM_030653 </td> <td> DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 </td> <td> DDX11 </td> <td> 1663 </td> <td> NM_001257144 /// NM_001257145 /// NM_004399 /// NM_030653 /// NM_030655 /// NM_152438 /// XM_005253331 /// XM_005253333 /// XM_006719041 /// XM_006719042 /// XM_006719043 /// XM_006719044 /// XM_006719045 /// XM_006719046 /// XM_006719047 /// XM_006719048 /// XM_006719049 /// XM_006719050 /// XM_006719051 /// XM_006719052 /// XM_006719053 /// XR_429031 </td> <td> 0000070 // mitotic sister chromatid segregation // traceable author statement /// 0000084 // mitotic S phase // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007062 // sister chromatid cohesion // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0000922 // spindle pole // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0030496 // midbody // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation </td> <td> 49.45 </td> <td> 129.40 </td> <td> 3.01 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212919_at </td> <td> 212919_at </td> <td> AV715578 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV715578 /FEA=EST /DB_XREF=gi:10797095 /DB_XREF=est:AV715578 /CLONE=DCBBJG09 /UG=Hs.21056 Homo sapiens cDNA: FLJ21366 fis, clone COL03012, highly similar to AB002445 Homo sapiens mRNA from chromosome 5q21-22 </td> <td> AV715578 </td> <td> decapping mRNA 2 </td> <td> DCP2 </td> <td> 167227 </td> <td> NM_001242377 /// NM_152624 /// NR_038352 /// XM_005271914 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006402 // mRNA catabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0071044 // histone mRNA catabolic process // inferred from mutant phenotype /// 0090503 // RNA phosphodiester bond hydrolysis, exonucleolytic // traceable author statement </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016442 // RISC complex // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016896 // exoribonuclease activity, producing 5'-phosphomonoesters // traceable author statement /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050072 // m7G(5')pppN diphosphatase activity // inferred from direct assay </td> <td> 42.77 </td> <td> 122.64 </td> <td> 3.01 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200811_at </td> <td> 200811_at </td> <td> NM_001280 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001280.1 /DEF=Homo sapiens cold inducible RNA-binding protein (CIRBP), mRNA. /FEA=mRNA /GEN=CIRBP /PROD=cold inducible RNA-binding protein /DB_XREF=gi:4502846 /UG=Hs.119475 cold inducible RNA-binding protein /FL=gb:D78134.1 gb:BC000403.1 gb:BC000901.1 gb:AF021336.1 gb:NM_001280.1 </td> <td> NM_001280 </td> <td> cold inducible RNA binding protein </td> <td> CIRBP </td> <td> 1153 </td> <td> NM_001280 /// NR_023312 /// NR_023313 /// XM_006722636 /// XM_006722637 /// XM_006722638 /// XR_430127 /// XR_430128 </td> <td> 0006950 // response to stress // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0009411 // response to UV // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0034063 // stress granule assembly // inferred from sequence or structural similarity /// 0045727 // positive regulation of translation // inferred from direct assay /// 0048255 // mRNA stabilization // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0030371 // translation repressor activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070181 // small ribosomal subunit rRNA binding // inferred from direct assay </td> <td> 98.67 </td> <td> 369.31 </td> <td> 3.01 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 221876_at </td> <td> 221876_at </td> <td> AU151157 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU151157 /FEA=EST /DB_XREF=gi:11012678 /DB_XREF=est:AU151157 /CLONE=NT2RP2004523 /UG=Hs.14217 hypothetical protein DKFZp762P2111 </td> <td> AU151157 </td> <td> zinc finger family member 783 </td> <td> ZNF783 </td> <td> 100289678 </td> <td> NM_001195220 /// XM_005249929 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 28.12 </td> <td> 29.69 </td> <td> 3.01 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201453_x_at </td> <td> 201453_x_at </td> <td> NM_005614 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005614.1 /DEF=Homo sapiens Ras homolog enriched in brain 2 (RHEB2), mRNA. /FEA=mRNA /GEN=RHEB2 /PROD=Ras homolog enriched in brain 2 /DB_XREF=gi:5032040 /UG=Hs.279903 Ras homolog enriched in brain 2 /FL=gb:D78132.1 gb:NM_005614.1 gb:AF148645.1 </td> <td> NM_005614 </td> <td> Ras homolog enriched in brain </td> <td> RHEB </td> <td> 6009 </td> <td> NM_005614 /// XM_006716081 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0032008 // positive regulation of TOR signaling // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from sequence or structural similarity /// 0019003 // GDP binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -148.07 </td> <td> 856.94 </td> <td> -3.01 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212155_at </td> <td> 212155_at </td> <td> AA085748 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA085748 /FEA=EST /DB_XREF=gi:1629231 /DB_XREF=est:zk71f11.s1 /CLONE=IMAGE:488301 /UG=Hs.144904 nuclear receptor co-repressor 1 </td> <td> AA085748 </td> <td> ring finger protein 187 </td> <td> RNF187 </td> <td> 149603 </td> <td> NM_001010858 </td> <td> 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 63.65 </td> <td> 173.82 </td> <td> 3.01 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 221515_s_at </td> <td> 221515_s_at </td> <td> BC001214 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001214.1 /DEF=Homo sapiens, CGI-68 protein, clone MGC:682, mRNA, complete cds. /FEA=mRNA /PROD=CGI-68 protein /DB_XREF=gi:12654744 /UG=Hs.8054 CGI-68 protein /FL=gb:BC001214.1 gb:AF151826.1 gb:NM_016015.1 </td> <td> BC001214 </td> <td> leucine carboxyl methyltransferase 1 </td> <td> LCMT1 </td> <td> 51451 </td> <td> NM_001032391 /// NM_016309 /// XM_005255354 /// XM_006721050 </td> <td> 0006464 // cellular protein modification process // traceable author statement /// 0006479 // protein methylation // inferred from mutant phenotype /// 0006481 // C-terminal protein methylation // inferred from direct assay /// 0031333 // negative regulation of protein complex assembly // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0090266 // regulation of mitotic cell cycle spindle assembly checkpoint // inferred from mutant phenotype </td> <td>  </td> <td> 0003880 // protein C-terminal carboxyl O-methyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 38.32 </td> <td> 106.49 </td> <td> 3.01 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201722_s_at </td> <td> 201722_s_at </td> <td> AV692127 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV692127 /FEA=EST /DB_XREF=gi:10293990 /DB_XREF=est:AV692127 /CLONE=GKCAOB04 /UG=Hs.80120 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) /FL=gb:U41514.1 gb:NM_020474.2 </td> <td> AV692127 </td> <td> polypeptide N-acetylgalactosaminyltransferase 1 </td> <td> GALNT1 </td> <td> 2589 </td> <td> NM_020474 /// XM_005258239 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0006493 // protein O-linked glycosylation // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0018242 // protein O-linked glycosylation via serine // inferred from direct assay /// 0018243 // protein O-linked glycosylation via threonine // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 101.28 </td> <td> 878.94 </td> <td> 3.01 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218192_at </td> <td> 218192_at </td> <td> NM_016291 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016291.1 /DEF=Homo sapiens mammalian inositol hexakisphosphate kinase 2 (IP6K2), mRNA.  /FEA=mRNA /GEN=IP6K2 /PROD=mammalian inositol hexakisphosphate kinase 2 /DB_XREF=gi:7705552 /UG=Hs.323432 mammalian inositol hexakisphosphate kinase 2 /FL=gb:AF177145.1 gb:NM_016291.1 </td> <td> NM_016291 </td> <td> inositol hexakisphosphate kinase 2 </td> <td> IP6K2 </td> <td> 51447 </td> <td> NM_001005909 /// NM_001005910 /// NM_001005911 /// NM_001005912 /// NM_001005913 /// NM_001146178 /// NM_001146179 /// NM_001190316 /// NM_001190317 /// NM_016291 /// NR_027437 /// NR_027438 /// XM_006713199 /// XM_006713200 /// XM_006713201 /// XM_006713202 </td> <td> 0006817 // phosphate ion transport // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from direct assay /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000832 // inositol hexakisphosphate 5-kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008440 // inositol-1,4,5-trisphosphate 3-kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0052723 // inositol hexakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052724 // inositol hexakisphosphate 3-kinase activity // inferred from electronic annotation </td> <td> -38.37 </td> <td> 134.11 </td> <td> -3.01 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200941_at </td> <td> 200941_at </td> <td> AK026575 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026575.1 /DEF=Homo sapiens cDNA: FLJ22922 fis, clone KAT06722. /FEA=mRNA /DB_XREF=gi:10439459 /UG=Hs.250899 heat shock factor binding protein 1 /FL=gb:AF068754.1 gb:NM_001537.1 </td> <td> AK026575 </td> <td> heat shock factor binding protein 1 </td> <td> HSBP1 </td> <td> 3281 </td> <td> NM_001537 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006936 // muscle contraction // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0003714 // transcription corepressor activity // traceable author statement </td> <td> 66.60 </td> <td> 213.10 </td> <td> 3.01 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218498_s_at </td> <td> 218498_s_at </td> <td> NM_014584 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014584.1 /DEF=Homo sapiens ERO1 (S. cerevisiae)-like (ERO1L), mRNA. /FEA=mRNA /GEN=ERO1L /PROD=ERO1 (S. cerevisiae)-like /DB_XREF=gi:7657068 /UG=Hs.25740 ERO1 (S. cerevisiae)-like /FL=gb:AF081886.1 gb:NM_014584.1 </td> <td> NM_014584 </td> <td> ERO1-like (S. cerevisiae) </td> <td> ERO1L </td> <td> 30001 </td> <td> NM_014584 </td> <td> 0006457 // protein folding // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009266 // response to temperature stimulus // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from sequence or structural similarity </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // traceable author statement </td> <td> 0003756 // protein disulfide isomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016671 // oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation </td> <td> -50.02 </td> <td> 69.21 </td> <td> -3.01 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 219148_at </td> <td> 219148_at </td> <td> NM_018492 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018492.1 /DEF=Homo sapiens PDZ-binding kinase; T-cell originated protein kinase (TOPK), mRNA.  /FEA=mRNA /GEN=TOPK /PROD=PDZ-binding kinase /DB_XREF=gi:8923876 /UG=Hs.104741 PDZ-binding kinase; T-cell originated protein kinase /FL=gb:AF189722.1 gb:AF237709.1 gb:NM_018492.1 gb:AB027249.1 gb:AB027250.1 </td> <td> NM_018492 </td> <td> PDZ binding kinase </td> <td> PBK </td> <td> 55872 </td> <td> NM_001278945 /// NM_018492 /// XM_006716368 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td>  </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 44.75 </td> <td> 153.95 </td> <td> 3.01 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 219253_at </td> <td> 219253_at </td> <td> NM_024121 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024121.1 /DEF=Homo sapiens hypothetical protein FLJ20979 (FLJ20979), mRNA. /FEA=mRNA /GEN=FLJ20979 /PROD=hypothetical protein FLJ20979 /DB_XREF=gi:13129145 /UG=Hs.44680 hypothetical protein FLJ20979 /FL=gb:NM_024121.1 </td> <td> NM_024121 </td> <td> transmembrane protein 185B </td> <td> TMEM185B </td> <td> 79134 </td> <td> NM_024121 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 33.97 </td> <td> 67.16 </td> <td> 3.00 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 218252_at </td> <td> 218252_at </td> <td> NM_018204 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018204.1 /DEF=Homo sapiens cytoskeleton associated protein 2 (CKAP2), mRNA. /FEA=mRNA /GEN=CKAP2 /PROD=cytoskeleton associated protein 2 /DB_XREF=gi:8922641 /UG=Hs.24641 cytoskeleton associated protein 2 /FL=gb:AL136848.1 gb:NM_018204.1 </td> <td> NM_018204 </td> <td> cytoskeleton associated protein 2 </td> <td> CKAP2 </td> <td> 26586 </td> <td> NM_001098525 /// NM_001286686 /// NM_001286687 /// NM_018204 /// XM_005266343 /// XM_005266344 </td> <td> 0000281 // mitotic cytokinesis // inferred from genetic interaction /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay </td> <td>  </td> <td> 100.27 </td> <td> 156.14 </td> <td> 3.00 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 205401_at </td> <td> 205401_at </td> <td> NM_003659 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003659.1 /DEF=Homo sapiens alkylglycerone phosphate synthase (AGPS), mRNA. /FEA=mRNA /GEN=AGPS /PROD=alkylglycerone phosphate synthase precursor /DB_XREF=gi:4501992 /UG=Hs.22580 alkylglycerone phosphate synthase /FL=gb:NM_003659.1 </td> <td> NM_003659 </td> <td> alkylglycerone phosphate synthase </td> <td> AGPS </td> <td> 8540 </td> <td> NM_003659 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from direct assay /// 0008611 // ether lipid biosynthetic process // inferred from electronic annotation /// 0008611 // ether lipid biosynthetic process // inferred from sequence or structural similarity /// 0008611 // ether lipid biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005777 // peroxisome // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005782 // peroxisomal matrix // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0008609 // alkylglycerone-phosphate synthase activity // inferred from direct assay /// 0008762 // UDP-N-acetylmuramate dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from sequence or structural similarity </td> <td> -41.58 </td> <td> 210.26 </td> <td> -2.99 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212330_at </td> <td> 212330_at </td> <td> R60866 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:R60866 /FEA=EST /DB_XREF=gi:831561 /DB_XREF=est:yh08a11.s1 /CLONE=IMAGE:42383 /UG=Hs.79353 hypothetical protein FLJ13576 </td> <td> R60866 </td> <td> transcription factor Dp-1 </td> <td> TFDP1 </td> <td> 7027 </td> <td> NM_007111 /// NR_026580 /// XM_005268326 /// XM_005268327 /// XM_005268328 /// XM_005268330 /// XM_005268331 /// XM_006719977 /// XM_006719978 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction </td> <td> 75.02 </td> <td> 336.39 </td> <td> 2.99 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 215017_s_at </td> <td> 215017_s_at </td> <td> AW270932 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW270932 /FEA=EST /DB_XREF=gi:6657962 /DB_XREF=est:xs06c12.x1 /CLONE=IMAGE:2768854 /UG=Hs.239681 hypothetical protein FLJ20275 </td> <td> AW270932 </td> <td> formin binding protein 1-like </td> <td> FNBP1L </td> <td> 54874 </td> <td> NM_001024948 /// NM_001164473 /// NM_017737 /// XM_006710707 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0006900 // membrane budding // inferred from direct assay /// 0006914 // autophagy // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0010324 // membrane invagination // inferred from direct assay /// 0016050 // vesicle organization // inferred from direct assay /// 0030050 // vesicle transport along actin filament // inferred from direct assay /// 0051491 // positive regulation of filopodium assembly // inferred from direct assay /// 0072583 // clathrin-mediated endocytosis // inferred from direct assay /// 0097320 // membrane tubulation // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation </td> <td> 49.65 </td> <td> 179.35 </td> <td> 2.99 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212085_at </td> <td> 212085_at </td> <td> AA916851 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA916851 /FEA=EST /DB_XREF=gi:3056243 /DB_XREF=est:on10g02.s1 /CLONE=IMAGE:1556306 /UG=Hs.164280 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 </td> <td> AA916851 </td> <td> solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 </td> <td> SLC25A6 </td> <td> 293 </td> <td> NM_001636 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0015866 // ADP transport // non-traceable author statement /// 0015867 // ATP transport // non-traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046732 // active induction of host immune response by virus // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005744 // mitochondrial inner membrane presequence translocase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005471 // ATP:ADP antiporter activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -334.28 </td> <td> 1560.74 </td> <td> -2.99 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201559_s_at </td> <td> 201559_s_at </td> <td> AF109196 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF109196.1 /DEF=Homo sapiens intracellular chloride channel p64H1 mRNA, complete cds.  /FEA=mRNA /PROD=intracellular chloride channel p64H1 /DB_XREF=gi:4588523 /UG=Hs.25035 chloride intracellular channel 4 /FL=gb:AF109196.1 gb:AF097330.1 gb:AL117424.1 gb:NM_013943.1 </td> <td> AF109196 </td> <td> chloride intracellular channel 4 </td> <td> CLIC4 </td> <td> 25932 </td> <td> NM_013943 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001886 // endothelial cell morphogenesis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // non-traceable author statement /// 0007035 // vacuolar acidification // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030216 // keratinocyte differentiation // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // non-traceable author statement /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // non-traceable author statement /// 0061299 // retina vasculature morphogenesis in camera-type eye // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from mutant phenotype /// 1902476 // chloride transmembrane transport // inferred from electronic annotation /// 1902476 // chloride transmembrane transport // traceable author statement </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005902 // microvillus // inferred from direct assay /// 0005911 // cell-cell junction // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0015629 // actin cytoskeleton // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -167.92 </td> <td> 567.26 </td> <td> -2.99 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 207029_at </td> <td> 207029_at </td> <td> NM_000899 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000899.1 /DEF=Homo sapiens KIT ligand (KITLG), mRNA. /FEA=mRNA /GEN=KITLG /PROD=mast cell growth factor, isoform b, precursor /DB_XREF=gi:4505174 /UG=Hs.1048 KIT ligand /FL=gb:M59964.1 gb:NM_000899.1 </td> <td> NM_000899 </td> <td> KIT ligand </td> <td> KITLG </td> <td> 4254 </td> <td> NM_000899 /// NM_003994 </td> <td> 0001755 // neural crest cell migration // inferred from electronic annotation /// 0002763 // positive regulation of myeloid leukocyte differentiation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008584 // male gonad development // inferred from expression pattern /// 0030097 // hemopoiesis // non-traceable author statement /// 0033026 // negative regulation of mast cell apoptotic process // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from direct assay /// 0035234 // ectopic germ cell programmed cell death // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045636 // positive regulation of melanocyte differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0070668 // positive regulation of mast cell proliferation // inferred from electronic annotation /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0005173 // stem cell factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation </td> <td> -32.77 </td> <td> 51.64 </td> <td> -2.99 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203688_at </td> <td> 203688_at </td> <td> NM_000297 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000297.1 /DEF=Homo sapiens polycystic kidney disease 2 (autosomal dominant) (PKD2), mRNA.  /FEA=mRNA /GEN=PKD2 /PROD=polycystin 2 /DB_XREF=gi:4505834 /UG=Hs.82001 polycystic kidney disease 2 (autosomal dominant) /FL=gb:U50928.1 gb:NM_000297.1 </td> <td> NM_000297 </td> <td> polycystic kidney disease 2 (autosomal dominant) </td> <td> PKD2 </td> <td> 5311 </td> <td> NM_000297 /// XR_244632 </td> <td> 0001658 // branching involved in ureteric bud morphogenesis // inferred from expression pattern /// 0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from expression pattern /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0001947 // heart looping // inferred from mutant phenotype /// 0003127 // detection of nodal flow // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from direct assay /// 0006816 // calcium ion transport // inferred from sequence or structural similarity /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from sequence or structural similarity /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from expression pattern /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from expression pattern /// 0021915 // neural tube development // inferred from expression pattern /// 0030814 // regulation of cAMP metabolic process // inferred from sequence or structural similarity /// 0031587 // positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from mutant phenotype /// 0031659 // positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle // inferred from direct assay /// 0034614 // cellular response to reactive oxygen species // non-traceable author statement /// 0035502 // metanephric part of ureteric bud development // inferred from expression pattern /// 0035725 // sodium ion transmembrane transport // inferred from direct assay /// 0035904 // aorta development // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from mutant phenotype /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0050982 // detection of mechanical stimulus // not recorded /// 0050982 // detection of mechanical stimulus // inferred from sequence or structural similarity /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from mutant phenotype /// 0051298 // centrosome duplication // non-traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060674 // placenta blood vessel development // inferred from sequence or structural similarity /// 0061333 // renal tubule morphogenesis // inferred from sequence or structural similarity /// 0061441 // renal artery morphogenesis // inferred from expression pattern /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 0071464 // cellular response to hydrostatic pressure // inferred from direct assay /// 0071470 // cellular response to osmotic stress // inferred from direct assay /// 0071498 // cellular response to fluid shear stress // inferred from mutant phenotype /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation /// 0071910 // determination of liver left/right asymmetry // inferred from mutant phenotype /// 0072001 // renal system development // inferred from electronic annotation /// 0072075 // metanephric mesenchyme development // inferred from expression pattern /// 0072164 // mesonephric tubule development // inferred from expression pattern /// 0072177 // mesonephric duct development // inferred from expression pattern /// 0072208 // metanephric smooth muscle tissue development // inferred from expression pattern /// 0072214 // metanephric cortex development // inferred from expression pattern /// 0072218 // metanephric ascending thin limb development // inferred from expression pattern /// 0072219 // metanephric cortical collecting duct development // inferred from expression pattern /// 0072235 // metanephric distal tubule development // inferred from expression pattern /// 0072284 // metanephric S-shaped body morphogenesis // inferred from expression pattern /// 0090279 // regulation of calcium ion import // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from mutant phenotype </td> <td> 0002133 // polycystin complex // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from mutant phenotype /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from sequence or structural similarity /// 0009925 // basal plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031941 // filamentous actin // inferred from direct assay /// 0036064 // ciliary basal body // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0045180 // basal cortex // inferred from direct assay /// 0060170 // ciliary membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071458 // integral component of cytoplasmic side of endoplasmic reticulum membrane // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay </td> <td> 0005102 // receptor binding // inferred from physical interaction /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from direct assay /// 0005245 // voltage-gated calcium channel activity // inferred from direct assay /// 0005248 // voltage-gated sodium channel activity // inferred from direct assay /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0015267 // channel activity // inferred from electronic annotation /// 0022843 // voltage-gated cation channel activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042805 // actinin binding // inferred from direct assay /// 0043398 // HLH domain binding // inferred from physical interaction /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048763 // calcium-induced calcium release activity // inferred from direct assay /// 0051117 // ATPase binding // inferred from sequence or structural similarity /// 0051219 // phosphoprotein binding // inferred from physical interaction /// 0051371 // muscle alpha-actinin binding // inferred from electronic annotation /// 0051393 // alpha-actinin binding // inferred from electronic annotation </td> <td> 31.15 </td> <td> 80.75 </td> <td> 2.99 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 32069_at </td> <td> 32069_at </td> <td> AB014515 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AB014515:Homo sapiens mRNA for KIAA0615 protein, complete cds /cds=(237,2927) /gb=AB014515 /gi=3327043 /ug=Hs.155972 /len=3319 </td> <td> AB014515 </td> <td> NEDD4 binding protein 1 </td> <td> N4BP1 </td> <td> 9683 </td> <td> NM_153029 /// XM_005256262 /// XM_006721351 </td> <td> 0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0034644 // cellular response to UV // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0016605 // PML body // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -27.52 </td> <td> 66.11 </td> <td> -2.99 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208916_at </td> <td> 208916_at </td> <td> AF105230 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF105230.1 /DEF=Homo sapiens neutral amino acid transporter (SLC1A5) mRNA, complete cds.  /FEA=mRNA /GEN=SLC1A5 /PROD=neutral amino acid transporter /DB_XREF=gi:4191561 /UG=Hs.183556 solute carrier family 1 (neutral amino acid transporter), member 5 /FL=gb:BC000062.1 gb:U53347.1 gb:AF102826.1 gb:AF105230.1 gb:AF105423.1 gb:NM_005628.1 </td> <td> AF105230 </td> <td> solute carrier family 1 (neutral amino acid transporter), member 5 </td> <td> SLC1A5 </td> <td> 6510 </td> <td> NM_001145144 /// NM_001145145 /// NM_005628 /// XM_005259167 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0006860 // extracellular amino acid transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0006868 // glutamine transport // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0015804 // neutral amino acid transport // traceable author statement /// 0015825 // L-serine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015175 // neutral amino acid transmembrane transporter activity // traceable author statement /// 0015186 // L-glutamine transmembrane transporter activity // traceable author statement /// 0015194 // L-serine transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation </td> <td> -85.15 </td> <td> 111.67 </td> <td> -2.98 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203893_at </td> <td> 203893_at </td> <td> NM_016283 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016283.1 /DEF=Homo sapiens adrenal gland protein AD-004 (LOC51578), mRNA. /FEA=mRNA /GEN=LOC51578 /PROD=adrenal gland protein AD-004 /DB_XREF=gi:7706211 /UG=Hs.279586 adrenal gland protein AD-004 /FL=gb:AF151895.1 gb:AF110777.1 gb:NM_016283.1 </td> <td> NM_016283 </td> <td> adenylate kinase 6 </td> <td> AK6 </td> <td> 102157402 </td> <td> NM_001015891 /// NM_016283 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006352 // DNA-templated transcription, initiation // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred by curator /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046939 // nucleotide phosphorylation // inferred from direct assay /// 0046939 // nucleotide phosphorylation // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay /// 0060760 // positive regulation of response to cytokine stimulus // inferred from mutant phenotype /// 0070555 // response to interleukin-1 // inferred from mutant phenotype /// 1902166 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred by curator </td> <td> 0000125 // PCAF complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030914 // STAGA complex // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay /// 0070761 // pre-snoRNP complex // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0004017 // adenylate kinase activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0070742 // C2H2 zinc finger domain binding // inferred from physical interaction </td> <td> -69.60 </td> <td> 159.35 </td> <td> -2.98 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 46323_at </td> <td> 46323_at </td> <td> AL120741 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AL120741:DKFZp762K231_r1 Homo sapiens cDNA, 5 end /clone=DKFZp762K231 /clone_end=5' /gb=AL120741 /gi=5926641 /ug=Hs.8859 /len=707 </td> <td> AL120741 </td> <td> calcium activated nucleotidase 1 </td> <td> CANT1 </td> <td> 124583 </td> <td> NM_001159772 /// NM_001159773 /// NM_138793 /// XM_005257020 /// XM_005257021 /// XM_005257022 /// XM_006721682 /// XM_006721683 /// XR_243633 </td> <td> 0007165 // signal transduction // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0030166 // proteoglycan biosynthetic process // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016462 // pyrophosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017110 // nucleoside-diphosphatase activity // inferred from electronic annotation /// 0045134 // uridine-diphosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 56.50 </td> <td> 220.55 </td> <td> 2.98 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200045_at </td> <td> 200045_at </td> <td> NM_001090 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001090.1 /DEF=Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 1 (ABCF1), mRNA.  /FEA=mRNA /GEN=ABCF1 /PROD=ATP-binding cassette, sub-family F, member 1 /DB_XREF=gi:10947134 /UG=Hs.9573 ATP-binding cassette, sub-family F (GCN20), member 1 /FL=gb:NM_001090.1 gb:AF027302.1 </td> <td> NM_001090 </td> <td> ATP-binding cassette, sub-family F (GCN20), member 1 </td> <td> ABCF1 </td> <td> 23 </td> <td> NM_001025091 /// NM_001090 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred from mutant phenotype /// 0006954 // inflammatory response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0042788 // polysomal ribosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0008494 // translation activator activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -111.70 </td> <td> 389.65 </td> <td> -2.98 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 219158_s_at </td> <td> 219158_s_at </td> <td> NM_025085 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025085.1 /DEF=Homo sapiens hypothetical protein FLJ13340 (FLJ13340), mRNA. /FEA=mRNA /GEN=FLJ13340 /PROD=hypothetical protein FLJ13340 /DB_XREF=gi:13376639 /UG=Hs.125034 hypothetical protein FLJ13340 /FL=gb:AF327722.1 gb:NM_025085.1 </td> <td> NM_025085 </td> <td> N(alpha)-acetyltransferase 15, NatA auxiliary subunit </td> <td> NAA15 </td> <td> 80155 </td> <td> NM_057175 /// XM_005263236 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006474 // N-terminal protein amino acid acetylation // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0050821 // protein stabilization // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031415 // NatA complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0043022 // ribosome binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 58.82 </td> <td> 124.49 </td> <td> 2.98 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212465_at </td> <td> 212465_at </td> <td> AA524500 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA524500 /FEA=EST /DB_XREF=gi:2265428 /DB_XREF=est:ng45f12.s1 /CLONE=IMAGE:937775 /UG=Hs.321766 Homo sapiens cDNA: FLJ23027 fis, clone LNG01826 </td> <td> AA524500 </td> <td> SET domain containing 3 </td> <td> SETD3 </td> <td> 84193 </td> <td> NM_032233 /// NM_199123 /// XM_005268126 /// XM_005268127 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0010452 // histone H3-K36 methylation // inferred from sequence or structural similarity /// 0016568 // chromatin modification // inferred from electronic annotation /// 0018022 // peptidyl-lysine methylation // inferred from electronic annotation /// 0018023 // peptidyl-lysine trimethylation // inferred from sequence or structural similarity /// 0018026 // peptidyl-lysine monomethylation // inferred from sequence or structural similarity /// 0018027 // peptidyl-lysine dimethylation // inferred from sequence or structural similarity /// 0032259 // methylation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0001102 // RNA polymerase II activating transcription factor binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0046975 // histone methyltransferase activity (H3-K36 specific) // inferred from sequence or structural similarity </td> <td> 38.75 </td> <td> 171.47 </td> <td> 2.98 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 211763_s_at </td> <td> 211763_s_at </td> <td> BC005979 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005979.1 /DEF=Homo sapiens, ubiquitin-conjugating enzyme E2B (RAD6 homolog), clone MGC:14670, mRNA, complete cds.  /FEA=mRNA /PROD=ubiquitin-conjugating enzyme E2B (RAD6 homolog) /DB_XREF=gi:13543659 /FL=gb:BC005979.1 </td> <td> BC005979 </td> <td> ubiquitin-conjugating enzyme E2B </td> <td> UBE2B </td> <td> 7320 </td> <td> NM_003337 </td> <td> 0000209 // protein polyubiquitination // inferred from mutant phenotype /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006281 // DNA repair // inferred from genetic interaction /// 0006301 // postreplication repair // inferred from direct assay /// 0006301 // postreplication repair // non-traceable author statement /// 0006344 // maintenance of chromatin silencing // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0006513 // protein monoubiquitination // inferred from mutant phenotype /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0007283 // spermatogenesis // traceable author statement /// 0007288 // sperm axoneme assembly // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009411 // response to UV // inferred from genetic interaction /// 0010845 // positive regulation of reciprocal meiotic recombination // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031056 // regulation of histone modification // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0033128 // negative regulation of histone phosphorylation // inferred from electronic annotation /// 0033522 // histone H2A ubiquitination // inferred from mutant phenotype /// 0042493 // response to drug // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043951 // negative regulation of cAMP-mediated signaling // inferred from direct assay /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0051026 // chiasma assembly // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0060070 // canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 0070076 // histone lysine demethylation // inferred from electronic annotation /// 0070193 // synaptonemal complex organization // inferred from electronic annotation /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0000785 // chromatin // inferred from sequence or structural similarity /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0001741 // XY body // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005657 // replication fork // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033503 // HULC complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> -54.28 </td> <td> 215.11 </td> <td> -2.98 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212276_at </td> <td> 212276_at </td> <td> D80010 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D80010.1 /DEF=Human mRNA for KIAA0188 gene, partial cds. /FEA=mRNA /GEN=KIAA0188 /DB_XREF=gi:1136435 /UG=Hs.81412 lipin 1 </td> <td> D80010 </td> <td> lipin 1 </td> <td> LPIN1 </td> <td> 23175 </td> <td> NM_001261427 /// NM_001261428 /// NM_001261429 /// NM_145693 /// XM_006711869 /// XM_006711870 /// XM_006711871 /// XM_006711872 /// XM_006711873 /// XM_006711874 /// XM_006711875 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000266 // mitochondrial fission // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006642 // triglyceride mobilization // inferred from sequence or structural similarity /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006646 // phosphatidylethanolamine biosynthetic process // traceable author statement /// 0006656 // phosphatidylcholine biosynthetic process // traceable author statement /// 0009062 // fatty acid catabolic process // inferred from sequence or structural similarity /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0031065 // positive regulation of histone deacetylation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031529 // ruffle organization // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045598 // regulation of fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from sequence or structural similarity </td> <td> 0001085 // RNA polymerase II transcription factor binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008195 // phosphatidate phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0042975 // peroxisome proliferator activated receptor binding // inferred from electronic annotation </td> <td> 43.38 </td> <td> 155.86 </td> <td> 2.98 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212739_s_at </td> <td> 212739_s_at </td> <td> AL523860 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL523860 /FEA=EST /DB_XREF=gi:12787353 /DB_XREF=est:AL523860 /CLONE=CS0DC003YM19 (5 prime) /UG=Hs.9235 non-metastatic cells 4, protein expressed in </td> <td> AL523860 </td> <td> NME/NM23 nucleoside diphosphate kinase 4 </td> <td> NME4 </td> <td> 4833 </td> <td> NM_001286433 /// NM_001286435 /// NM_001286436 /// NM_001286438 /// NM_001286439 /// NM_001286440 /// NM_005009 </td> <td> 0006165 // nucleoside diphosphate phosphorylation // inferred from electronic annotation /// 0006183 // GTP biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // traceable author statement /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005739 // mitochondrion // traceable author statement /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004550 // nucleoside diphosphate kinase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 53.57 </td> <td> 321.14 </td> <td> 2.98 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 221963_x_at </td> <td> 221963_x_at </td> <td> BE999967 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE999967 /FEA=EST /DB_XREF=gi:10700243 /DB_XREF=est:7h15a06.x1 /CLONE=IMAGE:3316018 /UG=Hs.87409 thrombospondin 1 </td> <td> BE999967 </td> <td> zinc finger protein 587B </td> <td> ZNF587B </td> <td> 100293516 </td> <td> NM_001204818 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 33.58 </td> <td> 41.86 </td> <td> 2.98 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201015_s_at </td> <td> 201015_s_at </td> <td> NM_021991 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021991.1 /DEF=Homo sapiens junction plakoglobin (JUP), transcript variant 2, mRNA.  /FEA=mRNA /GEN=JUP /PROD=junction plakoglobin, isoform 1 /DB_XREF=gi:12056467 /UG=Hs.2340 junction plakoglobin /FL=gb:NM_021991.1 gb:BC000441.1 </td> <td> NM_021991 </td> <td> junction plakoglobin </td> <td> JUP </td> <td> 3728 </td> <td> NM_002230 /// NM_021991 /// XM_005257313 /// XM_006721871 /// XM_006721872 /// XM_006721873 /// XM_006721874 /// XM_006721875 /// XM_006721876 /// XM_006721877 /// XM_006721878 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000902 // cell morphogenesis // not recorded /// 0002159 // desmosome assembly // inferred from direct assay /// 0002159 // desmosome assembly // inferred from mutant phenotype /// 0003136 // negative regulation of heart induction by canonical Wnt signaling pathway // not recorded /// 0003181 // atrioventricular valve morphogenesis // not recorded /// 0003308 // negative regulation of Wnt signaling pathway involved in heart development // not recorded /// 0007016 // cytoskeletal anchoring at plasma membrane // not recorded /// 0007016 // cytoskeletal anchoring at plasma membrane // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007369 // gastrulation // not recorded /// 0007398 // ectoderm development // not recorded /// 0007399 // nervous system development // not recorded /// 0016331 // morphogenesis of embryonic epithelium // not recorded /// 0016337 // single organismal cell-cell adhesion // inferred from direct assay /// 0016337 // single organismal cell-cell adhesion // inferred from mutant phenotype /// 0016477 // cell migration // inferred from mutant phenotype /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from direct assay /// 0042307 // positive regulation of protein import into nucleus // inferred from direct assay /// 0043588 // skin development // not recorded /// 0045216 // cell-cell junction organization // traceable author statement /// 0048599 // oocyte development // not recorded /// 0050982 // detection of mechanical stimulus // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0071603 // endothelial cell-cell adhesion // inferred from sequence or structural similarity /// 0071681 // cellular response to indole-3-methanol // inferred from direct assay /// 0086005 // ventricular cardiac muscle cell action potential // inferred from mutant phenotype /// 0086069 // bundle of His cell to Purkinje myocyte communication // inferred from mutant phenotype /// 0086091 // regulation of heart rate by cardiac conduction // inferred from mutant phenotype /// 0090002 // establishment of protein localization to plasma membrane // inferred from mutant phenotype /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred by curator </td> <td> 0005634 // nucleus // inferred from mutant phenotype /// 0005667 // transcription factor complex // not recorded /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005915 // zonula adherens // not recorded /// 0005915 // zonula adherens // inferred from sequence or structural similarity /// 0005916 // fascia adherens // not recorded /// 0009898 // cytoplasmic side of plasma membrane // not recorded /// 0009898 // cytoplasmic side of plasma membrane // inferred from sequence or structural similarity /// 0014704 // intercalated disc // inferred from direct assay /// 0015629 // actin cytoskeleton // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // not recorded /// 0016327 // apicolateral plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0016342 // catenin complex // inferred from direct assay /// 0030018 // Z disc // not recorded /// 0030054 // cell junction // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from sequence or structural similarity /// 0030057 // desmosome // inferred from direct assay /// 0032993 // protein-DNA complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071665 // gamma-catenin-TCF7L2 complex // inferred from direct assay </td> <td> 0003713 // transcription coactivator activity // inferred from direct assay /// 0005198 // structural molecule activity // not recorded /// 0005198 // structural molecule activity // non-traceable author statement /// 0005199 // structural constituent of cell wall // inferred by curator /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // not recorded /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0045294 // alpha-catenin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from physical interaction </td> <td> -65.25 </td> <td> 288.65 </td> <td> -2.97 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212463_at </td> <td> 212463_at </td> <td> BE379006 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE379006 /FEA=EST /DB_XREF=gi:9324371 /DB_XREF=est:601236272F1 /CLONE=IMAGE:3608680 /UG=Hs.99766 Homo sapiens mRNA; cDNA DKFZp564J0323 (from clone DKFZp564J0323) </td> <td> BE379006 </td> <td> CD59 molecule, complement regulatory protein </td> <td> CD59 </td> <td> 966 </td> <td> NM_000611 /// NM_001127223 /// NM_001127225 /// NM_001127226 /// NM_001127227 /// NM_203329 /// NM_203330 /// NM_203331 </td> <td> 0001775 // cell activation // not recorded /// 0001971 // negative regulation of activation of membrane attack complex // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030449 // regulation of complement activation // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement </td> <td> 0005576 // extracellular region // not recorded /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0031362 // anchored component of external side of plasma membrane // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043218 // compact myelin // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001848 // complement binding // not recorded /// 0005515 // protein binding // inferred from physical interaction </td> <td> 227.73 </td> <td> 319.01 </td> <td> 2.97 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 33579_i_at </td> <td> 33579_i_at </td> <td> Z97630 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. Z97630:Human DNA sequence from clone 466N1 on chromosome 22q12-13 Contains H1F0(H1 histone family, member 0) gene, 2-amino-3-ketobutyrate -CoA ligase( nuclear gene encoding mitochondrial protein), GALR3 (galanin receptor) gene, ESTs, GSSs and CpG islands /cds=(25,1131) /gb=Z97630 /gi=4582128 /ug=Hs.158353 /len=1157 </td> <td> Z97630 </td> <td> galanin receptor 3 </td> <td> GALR3 </td> <td> 8484 </td> <td> NM_003614 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007611 // learning or memory // traceable author statement /// 0007631 // feeding behavior // traceable author statement /// 0030818 // negative regulation of cAMP biosynthetic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004966 // galanin receptor activity // inferred from electronic annotation /// 0017046 // peptide hormone binding // inferred from direct assay </td> <td> -26.50 </td> <td> 50.98 </td> <td> -2.97 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 203708_at </td> <td> 203708_at </td> <td> NM_002600 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002600.1 /DEF=Homo sapiens phosphodiesterase 4B, cAMP-specific (dunce (Drosophila)-homolog phosphodiesterase E4) (PDE4B), mRNA.  /FEA=mRNA /GEN=PDE4B /PROD=phosphodiesterase 4B, cAMP-specific (dunce(Drosophila)-homolog phosphodiesterase E4) /DB_XREF=gi:4505662 /UG=Hs.188 phosphodiesterase 4B, cAMP-specific (dunce (Drosophila)-homolog phosphodiesterase E4) /FL=gb:M97515.1 gb:L20971.1 gb:NM_002600.1 </td> <td> NM_002600 </td> <td> phosphodiesterase 4B, cAMP-specific </td> <td> PDE4B </td> <td> 5142 </td> <td> NM_001037339 /// NM_001037340 /// NM_001037341 /// NM_001297440 /// NM_001297441 /// NM_001297442 /// NM_002600 /// XM_005270923 /// XM_005270924 /// XM_005270925 /// XM_005270926 /// XM_006710680 </td> <td> 0001780 // neutrophil homeostasis // inferred from sequence or structural similarity /// 0006198 // cAMP catabolic process // inferred from direct assay /// 0006198 // cAMP catabolic process // inferred from electronic annotation /// 0006198 // cAMP catabolic process // inferred from genetic interaction /// 0007165 // signal transduction // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0030593 // neutrophil chemotaxis // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from mutant phenotype /// 0032743 // positive regulation of interleukin-2 production // inferred from mutant phenotype /// 0035690 // cellular response to drug // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // inferred from mutant phenotype /// 0050900 // leukocyte migration // inferred from sequence or structural similarity /// 0071222 // cellular response to lipopolysaccharide // inferred from sequence or structural similarity /// 0071872 // cellular response to epinephrine stimulus // inferred from sequence or structural similarity /// 0086004 // regulation of cardiac muscle cell contraction // inferred from sequence or structural similarity /// 1901841 // regulation of high voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 1901898 // negative regulation of relaxation of cardiac muscle // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005891 // voltage-gated calcium channel complex // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from sequence or structural similarity /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from direct assay /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from genetic interaction /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from genetic interaction /// 0044325 // ion channel binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -113.20 </td> <td> 482.98 </td> <td> -2.97 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212181_s_at </td> <td> 212181_s_at </td> <td> AF191654 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF191654.2 /DEF=Homo sapiens diphosphoinositol polyphosphate phosphohydrolase type 2 (NUDT4) gene, partial sequence.  /FEA=mRNA /DB_XREF=gi:7741064 /UG=Hs.92381 nudix (nucleoside diphosphate linked moiety X)-type motif 4 </td> <td> AF191654 </td> <td> nudix (nucleoside diphosphate linked moiety X)-type motif 4 /// nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1 /// nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 2 </td> <td> NUDT4 /// NUDT4P1 /// NUDT4P2 </td> <td> 11163 /// 170688 /// 440672 </td> <td> NM_019094 /// NM_199040 /// NR_002212 /// NR_104005 /// XM_005268595 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0009187 // cyclic nucleotide metabolic process // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0019935 // cyclic-nucleotide-mediated signaling // traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046831 // regulation of RNA export from nucleus // traceable author statement /// 0046907 // intracellular transport // traceable author statement </td> <td> 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030515 // snoRNA binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050072 // m7G(5')pppN diphosphatase activity // inferred from sequence or structural similarity /// 0052840 // inositol diphosphate tetrakisphosphate diphosphatase activity // traceable author statement /// 0052841 // inositol bisdiphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052842 // inositol diphosphate pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052843 // inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052844 // inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052845 // inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052846 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity // inferred from electronic annotation /// 0052847 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation /// 0052848 // inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation </td> <td> 272.53 </td> <td> 733.04 </td> <td> 2.97 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 209834_at </td> <td> 209834_at </td> <td> AB017915 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB017915.1 /DEF=Homo sapiens mRNA for chondroitin 6-sulfotransferase, complete cds. /FEA=mRNA /PROD=chondroitin 6-sulfotransferase /DB_XREF=gi:4115403 /UG=Hs.158304 carbohydrate (chondroitin 6keratan) sulfotransferase 3 /FL=gb:AB017915.1 </td> <td> AB017915 </td> <td> carbohydrate (chondroitin 6) sulfotransferase 3 </td> <td> CHST3 </td> <td> 9469 </td> <td> NM_004273 /// XM_006718075 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006790 // sulfur compound metabolic process // inferred from direct assay /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // inferred from direct assay /// 0030206 // chondroitin sulfate biosynthetic process // traceable author statement /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0008146 // sulfotransferase activity // traceable author statement /// 0008459 // chondroitin 6-sulfotransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0050698 // proteoglycan sulfotransferase activity // inferred from electronic annotation </td> <td> 35.83 </td> <td> 39.44 </td> <td> 2.97 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 219520_s_at </td> <td> 219520_s_at </td> <td> NM_018458 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018458.1 /DEF=Homo sapiens uncharacterized bone marrow protein BM042 (BM042), mRNA.  /FEA=mRNA /GEN=BM042 /PROD=uncharacterized bone marrow protein BM042 /DB_XREF=gi:8922101 /UG=Hs.324136 uncharacterized bone marrow protein BM042 /FL=gb:AF217518.1 gb:NM_018458.1 </td> <td> NM_018458 </td> <td> WWC family member 3 </td> <td> WWC3 </td> <td> 55841 </td> <td> NM_015691 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0035331 // negative regulation of hippo signaling // inferred from direct assay /// 0046621 // negative regulation of organ growth // inferred from mutant phenotype </td> <td> 0005829 // cytosol // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0032947 // protein complex scaffold // inferred from direct assay </td> <td> -83.25 </td> <td> 216.53 </td> <td> -2.97 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 220081_x_at </td> <td> 220081_x_at </td> <td> NM_016371 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016371.1 /DEF=Homo sapiens hydroxysteroid (17-beta) dehydrogenase 7 (HSD17B7), mRNA.  /FEA=mRNA /GEN=HSD17B7 /PROD=hydroxysteroid (17-beta) dehydrogenase 7 /DB_XREF=gi:7705420 /UG=Hs.187579 hydroxysteroid (17-beta) dehydrogenase 7 /FL=gb:AF098786.2 gb:NM_016371.1 </td> <td> NM_016371 </td> <td> hydroxysteroid (17-beta) dehydrogenase 7 </td> <td> HSD17B7 </td> <td> 51478 </td> <td> NM_016371 /// XM_006711380 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006703 // estrogen biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000253 // 3-keto sterol reductase activity // inferred from electronic annotation /// 0004303 // estradiol 17-beta-dehydrogenase activity // inferred from electronic annotation /// 0005148 // prolactin receptor binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation </td> <td> 34.72 </td> <td> 65.81 </td> <td> 2.97 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 211746_x_at </td> <td> 211746_x_at </td> <td> BC005932 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005932.1 /DEF=Homo sapiens, proteasome (prosome, macropain) subunit, alpha type, 1, clone MGC:14542, mRNA, complete cds.  /FEA=mRNA /PROD=proteasome (prosome, macropain) subunit, alphatype, 1 /DB_XREF=gi:13543550 /FL=gb:BC005932.1 </td> <td> BC005932 </td> <td> proteasome (prosome, macropain) subunit, alpha type, 1 </td> <td> PSMA1 </td> <td> 5682 </td> <td> NM_001143937 /// NM_002786 /// NM_148976 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002862 // negative regulation of inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0005844 // polysome // traceable author statement /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001530 // lipopolysaccharide binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -106.75 </td> <td> 1263.10 </td> <td> -2.97 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 211271_x_at </td> <td> 211271_x_at </td> <td> BC004383 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004383.1 /DEF=Homo sapiens, Similar to polypyrimidine tract binding protein (heterogeneous nuclear ribonucleoprotein I), clone MGC:10830, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to polypyrimidine tract binding protein(heterogeneous nuclear ribonucleoprotein I) /DB_XREF=gi:13325139 /UG=Hs.172550 polypyrimidine tract binding protein (heterogeneous nuclear ribonucleoprotein I) /FL=gb:BC004383.1 </td> <td> BC004383 </td> <td> microRNA 4745 /// polypyrimidine tract binding protein 1 </td> <td> MIR4745 /// PTBP1 </td> <td> 5725 /// 100616459 </td> <td> NM_002819 /// NM_031990 /// NM_031991 /// NM_175847 /// NR_039900 /// XM_005259597 /// XM_005259598 /// XR_244034 /// XR_244035 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0051148 // negative regulation of muscle cell differentiation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008187 // poly-pyrimidine tract binding // traceable author statement /// 0036002 // pre-mRNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 160.90 </td> <td> 735.33 </td> <td> 2.97 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 217888_s_at </td> <td> 217888_s_at </td> <td> NM_018209 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018209.1 /DEF=Homo sapiens hypothetical protein FLJ10767 (FLJ10767), mRNA. /FEA=mRNA /GEN=FLJ10767 /PROD=hypothetical protein FLJ10767 /DB_XREF=gi:8922651 /UG=Hs.25584 hypothetical protein FLJ10767 /FL=gb:NM_018209.1 </td> <td> NM_018209 </td> <td> ADP-ribosylation factor GTPase activating protein 1 </td> <td> ARFGAP1 </td> <td> 55738 </td> <td> NM_001281482 /// NM_001281483 /// NM_001281484 /// NM_018209 /// NM_175609 /// NR_104022 /// NR_104023 /// XM_006723823 /// XM_006723824 /// XR_430304 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0030660 // Golgi-associated vesicle membrane // traceable author statement /// 0031965 // nuclear membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 35.45 </td> <td> 87.30 </td> <td> 2.97 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 208716_s_at </td> <td> 208716_s_at </td> <td> AB020980 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB020980.1 /DEF=Homo sapiens mRNA for putative membrane protein, complete cds. /FEA=mRNA /PROD=membrane protein /DB_XREF=gi:6467174 /UG=Hs.93832 putative membrane protein /FL=gb:BC000104.1 gb:AB020980.1 </td> <td> AB020980 </td> <td> transmembrane and coiled-coil domains 1 </td> <td> TMCO1 </td> <td> 54499 </td> <td> NM_001256164 /// NM_001256165 /// NM_019026 /// NR_045818 </td> <td>  </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 90.58 </td> <td> 312.39 </td> <td> 2.97 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 201463_s_at </td> <td> 201463_s_at </td> <td> NM_006755 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006755.1 /DEF=Homo sapiens transaldolase 1 (TALDO1), mRNA. /FEA=mRNA /GEN=TALDO1 /PROD=transaldolase 1 /DB_XREF=gi:5803186 /UG=Hs.77290 transaldolase 1 /FL=gb:L19437.2 gb:NM_006755.1 </td> <td> NM_006755 </td> <td> transaldolase 1 </td> <td> TALDO1 </td> <td> 6888 </td> <td> NM_006755 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0005999 // xylulose biosynthetic process // traceable author statement /// 0006002 // fructose 6-phosphate metabolic process // inferred from electronic annotation /// 0006098 // pentose-phosphate shunt // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0009052 // pentose-phosphate shunt, non-oxidative branch // inferred from electronic annotation /// 0019682 // glyceraldehyde-3-phosphate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004801 // sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0048029 // monosaccharide binding // inferred from electronic annotation </td> <td> -96.22 </td> <td> 546.31 </td> <td> -2.97 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 200025_s_at </td> <td> 200025_s_at </td> <td> NM_000988 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000988.1 /DEF=Homo sapiens ribosomal protein L27 (RPL27), mRNA. /FEA=mRNA /GEN=RPL27 /PROD=ribosomal protein L27 /DB_XREF=gi:4506622 /UG=Hs.111611 ribosomal protein L27 /FL=gb:BC002588.1 gb:L05094.1 gb:L19527.1 gb:NM_000988.1 </td> <td> NM_000988 </td> <td> ribosomal protein L27 </td> <td> RPL27 </td> <td> 6155 </td> <td> NM_000988 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -250.95 </td> <td> 2650.82 </td> <td> -2.96 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.50 </td> </tr>
  <tr> <td> 212505_s_at </td> <td> 212505_s_at </td> <td> AL110250 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL110250.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434P101 (from clone DKFZp434P101); partial cds.  /FEA=mRNA /GEN=DKFZp434P101 /PROD=hypothetical protein /DB_XREF=gi:5817201 /UG=Hs.112751 KIAA0892 protein </td> <td> AL110250 </td> <td> MAU2 sister chromatid cohesion factor </td> <td> MAU2 </td> <td> 23383 </td> <td> NM_015329 /// XM_005259837 /// XM_005259838 /// XM_006722711 /// XR_430132 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0034088 // maintenance of mitotic sister chromatid cohesion // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0032116 // SMC loading complex // inferred from direct assay /// 0032116 // SMC loading complex // inferred from mutant phenotype </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -44.10 </td> <td> 136.95 </td> <td> -2.96 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 219110_at </td> <td> 219110_at </td> <td> NM_018983 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018983.1 /DEF=Homo sapiens GAR1 protein (GAR1), mRNA. /FEA=mRNA /GEN=GAR1 /PROD=GAR1 protein /DB_XREF=gi:9506712 /UG=Hs.69851 nucleolar protein family A, member 1 (HACA small nucleolar RNPs) /FL=gb:BC003413.1 gb:NM_018983.1 </td> <td> NM_018983 </td> <td> GAR1 ribonucleoprotein </td> <td> GAR1 </td> <td> 54433 </td> <td> NM_018983 /// NM_032993 /// XM_005263069 </td> <td> 0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006812 // cation transport // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031429 // box H/ACA snoRNP complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005261 // cation channel activity // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 44.28 </td> <td> 218.01 </td> <td> 2.96 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 209780_at </td> <td> 209780_at </td> <td> AL136883 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136883.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434D166 (from clone DKFZp434D166); complete cds.  /FEA=mRNA /GEN=DKFZp434D166 /PROD=hypothetical protein /DB_XREF=gi:12053266 /UG=Hs.128653 hypothetical protein DKFZp564F013 /FL=gb:AL136883.1 </td> <td> AL136883 </td> <td> putative homeodomain transcription factor 2 </td> <td> PHTF2 </td> <td> 57157 </td> <td> NM_001127357 /// NM_001127358 /// NM_001127359 /// NM_001127360 /// NM_020432 /// XM_005250508 /// XM_005250509 /// XM_006716063 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation </td> <td> 29.60 </td> <td> 66.62 </td> <td> 2.96 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202680_at </td> <td> 202680_at </td> <td> NM_002095 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002095.1 /DEF=Homo sapiens general transcription factor IIE, polypeptide 2 (beta subunit, 34kD) (GTF2E2), mRNA.  /FEA=mRNA /GEN=GTF2E2 /PROD=general transcription factor IIE, polypeptide 2(beta subunit, 34kD) /DB_XREF=gi:4504194 /UG=Hs.77100 general transcription factor IIE, polypeptide 2 (beta subunit, 34kD) /FL=gb:NM_002095.1 </td> <td> NM_002095 </td> <td> general transcription factor IIE, polypeptide 2, beta 34kDa </td> <td> GTF2E2 </td> <td> 2961 </td> <td> NM_002095 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005673 // transcription factor TFIIE complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 42.95 </td> <td> 180.40 </td> <td> 2.96 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212514_x_at </td> <td> 212514_x_at </td> <td> R60068 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:R60068 /FEA=EST /DB_XREF=gi:830763 /DB_XREF=est:yh12h07.s1 /CLONE=IMAGE:43138 /UG=Hs.147916 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 3 </td> <td> R60068 </td> <td> DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked </td> <td> DDX3X </td> <td> 1654 </td> <td> NM_001193416 /// NM_001193417 /// NM_001356 /// NM_024005 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 0009615 // response to virus // inferred from direct assay /// 0010501 // RNA secondary structure unwinding // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0031333 // negative regulation of protein complex assembly // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // traceable author statement /// 0034063 // stress granule assembly // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042256 // mature ribosome assembly // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045948 // positive regulation of translational initiation // inferred from mutant phenotype /// 0071243 // cellular response to arsenic-containing substance // inferred from direct assay /// 0071470 // cellular response to osmotic stress // inferred from direct assay /// 0071651 // positive regulation of chemokine (C-C motif) ligand 5 production // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 1900087 // positive regulation of G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from direct assay /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004004 // ATP-dependent RNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0008143 // poly(A) binding // inferred from direct assay /// 0008190 // eukaryotic initiation factor 4E binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0031369 // translation initiation factor binding // inferred from direct assay /// 0035613 // RNA stem-loop binding // inferred from direct assay /// 0043024 // ribosomal small subunit binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048027 // mRNA 5'-UTR binding // inferred from direct assay </td> <td> -88.98 </td> <td> 302.91 </td> <td> -2.95 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 203964_at </td> <td> 203964_at </td> <td> NM_004688 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004688.1 /DEF=Homo sapiens N-myc (and STAT) interactor (NMI), mRNA. /FEA=mRNA /GEN=NMI /PROD=N-myc and STAT interactor /DB_XREF=gi:4758813 /UG=Hs.54483 N-myc (and STAT) interactor /FL=gb:BC001268.1 gb:U32849.1 gb:NM_004688.1 </td> <td> NM_004688 </td> <td> N-myc (and STAT) interactor </td> <td> NMI </td> <td> 9111 </td> <td> NM_004688 /// XM_005246941 </td> <td> 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007259 // JAK-STAT cascade // traceable author statement /// 2001141 // regulation of RNA biosynthetic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -43.45 </td> <td> 177.30 </td> <td> -2.95 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200634_at </td> <td> 200634_at </td> <td> NM_005022 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005022.1 /DEF=Homo sapiens profilin 1 (PFN1), mRNA. /FEA=mRNA /GEN=PFN1 /PROD=profilin 1 /DB_XREF=gi:4826897 /UG=Hs.75721 profilin 1 /FL=gb:BC002475.1 gb:J03191.1 gb:NM_005022.1 </td> <td> NM_005022 </td> <td> profilin 1 </td> <td> PFN1 </td> <td> 5216 </td> <td> NM_005022 </td> <td> 0001843 // neural tube closure // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010634 // positive regulation of epithelial cell migration // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030837 // negative regulation of actin filament polymerization // inferred from direct assay /// 0030838 // positive regulation of actin filament polymerization // inferred from genetic interaction /// 0032232 // negative regulation of actin filament bundle assembly // inferred from mutant phenotype /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // inferred from electronic annotation /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0051497 // negative regulation of stress fiber assembly // inferred from mutant phenotype /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 1900029 // positive regulation of ruffle assembly // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000774 // adenyl-nucleotide exchange factor activity // inferred from direct assay /// 0003779 // actin binding // inferred from physical interaction /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from physical interaction </td> <td> -360.45 </td> <td> 2340.05 </td> <td> -2.95 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 207585_s_at </td> <td> 207585_s_at </td> <td> NM_001001 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001001.1 /DEF=Homo sapiens ribosomal protein L36a (RPL36A), mRNA. /FEA=mRNA /GEN=RPL36A /PROD=ribosomal protein L36a /DB_XREF=gi:4506650 /UG=Hs.118857 ribosomal protein L36a /FL=gb:M15661.1 gb:NM_001001.1 </td> <td> NM_001001 </td> <td> ribosomal protein L36a-like </td> <td> RPL36AL </td> <td> 6166 </td> <td> NM_001001 </td> <td> 0006412 // translation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation </td> <td> -108.82 </td> <td> 745.26 </td> <td> -2.95 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 214363_s_at </td> <td> 214363_s_at </td> <td> AA129420 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA129420 /FEA=EST /DB_XREF=gi:1689185 /DB_XREF=est:zn85c07.s1 /CLONE=IMAGE:564972 /UG=Hs.78825 matrin 3 </td> <td> AA129420 </td> <td> matrin 3 /// small nucleolar RNA host gene 4 (non-protein coding) </td> <td> MATR3 /// SNHG4 </td> <td> 9782 /// 724102 </td> <td> NM_001194954 /// NM_001194955 /// NM_001194956 /// NM_001282278 /// NM_018834 /// NM_199189 /// NR_003141 /// NR_036536 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005637 // nuclear inner membrane // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 122.45 </td> <td> 858.73 </td> <td> 2.95 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208641_s_at </td> <td> 208641_s_at </td> <td> BC004247 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004247.1 /DEF=Homo sapiens, ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1), clone MGC:10547, mRNA, complete cds.  /FEA=mRNA /PROD=ras-related C3 botulinum toxin substrate 1 (rhofamily, small GTP binding protein Rac1) /DB_XREF=gi:13279010 /UG=Hs.173737 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) /FL=gb:BC004247.1 gb:M29870.1 gb:M31467.1 gb:NM_006908.2 </td> <td> BC004247 </td> <td> ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) </td> <td> RAC1 </td> <td> 5879 </td> <td> NM_006908 /// NM_018890 /// NM_198829 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0002093 // auditory receptor cell morphogenesis // inferred from electronic annotation /// 0002551 // mast cell chemotaxis // inferred from electronic annotation /// 0003382 // epithelial cell morphogenesis // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006911 // phagocytosis, engulfment // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006972 // hyperosmotic response // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0010310 // regulation of hydrogen peroxide metabolic process // traceable author statement /// 0010592 // positive regulation of lamellipodium assembly // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016358 // dendrite development // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021799 // cerebral cortex radially oriented cell migration // inferred from electronic annotation /// 0021831 // embryonic olfactory bulb interneuron precursor migration // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from genetic interaction /// 0030041 // actin filament polymerization // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0031529 // ruffle organization // inferred from direct assay /// 0031529 // ruffle organization // traceable author statement /// 0032707 // negative regulation of interleukin-23 production // inferred from direct assay /// 0034446 // substrate adhesion-dependent cell spreading // inferred from electronic annotation /// 0035025 // positive regulation of Rho protein signal transduction // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0043652 // engulfment of apoptotic cell // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0045453 // bone resorption // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048261 // negative regulation of receptor-mediated endocytosis // traceable author statement /// 0048532 // anatomical structure arrangement // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0048870 // cell motility // inferred from direct assay /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0051668 // localization within membrane // inferred from mutant phenotype /// 0060071 // Wnt signaling pathway, planar cell polarity pathway // inferred from electronic annotation /// 0060263 // regulation of respiratory burst // inferred from direct assay /// 0071526 // semaphorin-plexin signaling pathway // inferred from sequence or structural similarity /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // inferred from electronic annotation /// 0097178 // ruffle assembly // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0001891 // phagocytic cup // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0019897 // extrinsic component of plasma membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction /// 0051022 // Rho GDP-dissociation inhibitor binding // inferred from sequence or structural similarity </td> <td> -210.78 </td> <td> 1234.74 </td> <td> -2.95 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200664_s_at </td> <td> 200664_s_at </td> <td> BG537255 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG537255 /FEA=EST /DB_XREF=gi:13529117 /DB_XREF=est:602565318F1 /CLONE=IMAGE:4689748 /UG=Hs.82646 DnaJ (Hsp40) homolog, subfamily B, member 1 /FL=gb:BC002352.1 gb:NM_006145.1 gb:D49547.1 </td> <td> BG537255 </td> <td> DnaJ (Hsp40) homolog, subfamily B, member 1 </td> <td> DNAJB1 </td> <td> 3337 </td> <td> NM_006145 /// XM_006722733 /// XM_006722734 /// XM_006722735 /// XM_006722736 </td> <td> 0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0070389 // chaperone cofactor-dependent protein refolding // inferred from direct assay /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001671 // ATPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0030544 // Hsp70 protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from physical interaction /// 0051117 // ATPase binding // inferred from physical interaction </td> <td> 34.45 </td> <td> 84.65 </td> <td> 2.95 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 220147_s_at </td> <td> 220147_s_at </td> <td> NM_021238 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021238.1 /DEF=Homo sapiens TERA protein (TERA), mRNA. /FEA=mRNA /GEN=TERA /PROD=TERA protein /DB_XREF=gi:10864048 /UG=Hs.180780 TERA protein /FL=gb:NM_021238.1 gb:BC000024.1 </td> <td> NM_021238 </td> <td> family with sequence similarity 60, member A </td> <td> FAM60A </td> <td> 58516 </td> <td> NM_001135811 /// NM_001135812 /// NM_021238 /// XM_005253456 /// XM_005253457 /// XM_005253458 /// XM_006725149 /// XM_006725150 /// XM_006725151 </td> <td> 0030336 // negative regulation of cell migration // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016580 // Sin3 complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -205.77 </td> <td> 485.69 </td> <td> -2.95 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201408_at </td> <td> 201408_at </td> <td> W67887 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W67887 /FEA=EST /DB_XREF=gi:1376776 /DB_XREF=est:zd38c11.s1 /CLONE=IMAGE:342932 /UG=Hs.21537 protein phosphatase 1, catalytic subunit, beta isoform /FL=gb:NM_002709.1 gb:AF092905.1 </td> <td> W67887 </td> <td> protein phosphatase 1, catalytic subunit, beta isozyme </td> <td> PPP1CB </td> <td> 5500 </td> <td> NM_002709 /// NM_206876 /// NM_206877 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005979 // regulation of glycogen biosynthetic process // inferred from electronic annotation /// 0005981 // regulation of glycogen catabolic process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0042752 // regulation of circadian rhythm // inferred from mutant phenotype /// 0043153 // entrainment of circadian clock by photoperiod // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0046822 // regulation of nucleocytoplasmic transport // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0000164 // protein phosphatase type 1 complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0042587 // glycogen granule // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from sequence or structural similarity /// 0017018 // myosin phosphatase activity // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from physical interaction /// 0043021 // ribonucleoprotein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050115 // myosin-light-chain-phosphatase activity // inferred from direct assay </td> <td> 32.28 </td> <td> 66.59 </td> <td> 2.95 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208939_at </td> <td> 208939_at </td> <td> AV682679 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV682679 /FEA=EST /DB_XREF=gi:10284542 /DB_XREF=est:AV682679 /CLONE=GKBACG02 /UG=Hs.124027 SELENOPHOSPHATE SYNTHETASE ; Human selenium donor protein /FL=gb:BC000941.1 </td> <td> AV682679 </td> <td> selenophosphate synthetase 1 </td> <td> SEPHS1 </td> <td> 22929 </td> <td> NM_001195602 /// NM_001195604 /// NM_012247 /// XM_006717433 </td> <td> 0006464 // cellular protein modification process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004756 // selenide, water dikinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay </td> <td> 42.55 </td> <td> 148.93 </td> <td> 2.95 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 217456_x_at </td> <td> 217456_x_at </td> <td> M31183 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:M31183.1 /DEF=Homo sapiens (cosmid clone cd3.3) MHC class I HLA-B51 mRNA, 3 end of cds.  /FEA=mRNA /GEN=HLA-B /PROD=MHC class I lymphocyte antigen /DB_XREF=gi:601851 /UG=Hs.181392 major histocompatibility complex, class I, E </td> <td> M31183 </td> <td> major histocompatibility complex, class I, E </td> <td> HLA-E </td> <td> 3133 </td> <td> NM_005516 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002476 // antigen processing and presentation of endogenous peptide antigen via MHC class Ib // inferred from direct assay /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002717 // positive regulation of natural killer cell mediated immunity // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042270 // protection from natural killer cell mediated cytotoxicity // inferred from direct assay /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005102 // receptor binding // not recorded /// 0042288 // MHC class I protein binding // inferred from direct assay /// 0042605 // peptide antigen binding // not recorded /// 0042605 // peptide antigen binding // inferred from direct assay </td> <td> -101.58 </td> <td> 336.84 </td> <td> -2.95 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 217780_at </td> <td> 217780_at </td> <td> NM_016145 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016145.1 /DEF=Homo sapiens PTD008 protein (PTD008), mRNA. /FEA=mRNA /GEN=PTD008 /PROD=PTD008 protein /DB_XREF=gi:7706664 /UG=Hs.108969 PTD008 protein /FL=gb:AF059620.1 gb:AF151898.1 gb:AF078861.1 gb:NM_016145.1 </td> <td> NM_016145 </td> <td> WD repeat domain 83 opposite strand </td> <td> WDR83OS </td> <td> 51398 </td> <td> NM_016145 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -94.03 </td> <td> 475.19 </td> <td> -2.94 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200678_x_at </td> <td> 200678_x_at </td> <td> NM_002087 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002087.1 /DEF=Homo sapiens granulin (GRN), mRNA. /FEA=mRNA /GEN=GRN /PROD=granulin /DB_XREF=gi:4504150 /UG=Hs.180577 granulin /FL=gb:M75161.1 gb:AF055008.1 gb:NM_002087.1 </td> <td> NM_002087 </td> <td> granulin </td> <td> GRN </td> <td> 2896 </td> <td> NM_001012479 /// NM_002087 /// XM_005257253 </td> <td> 0001835 // blastocyst hatching // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -132.52 </td> <td> 586.96 </td> <td> -2.94 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 211747_s_at </td> <td> 211747_s_at </td> <td> BC005938 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005938.1 /DEF=Homo sapiens, U6 snRNA-associated Sm-like protein, clone MGC:14558, mRNA, complete cds.  /FEA=mRNA /PROD=U6 snRNA-associated Sm-like protein /DB_XREF=gi:13543564 /FL=gb:BC005938.1 </td> <td> BC005938 </td> <td> LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) </td> <td> LSM5 </td> <td> 23658 </td> <td> NM_001130710 /// NM_001139499 /// NM_012322 /// NR_024466 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 66.98 </td> <td> 277.61 </td> <td> 2.94 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202396_at </td> <td> 202396_at </td> <td> NM_006706 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006706.1 /DEF=Homo sapiens transcription factor CA150 (CA150), mRNA. /FEA=mRNA /GEN=CA150 /PROD=transcription factor CA150 /DB_XREF=gi:5729753 /UG=Hs.13063 transcription factor CA150 /FL=gb:AF017789.1 gb:NM_006706.1 </td> <td> NM_006706 </td> <td> transcription elongation regulator 1 </td> <td> TCERG1 </td> <td> 10915 </td> <td> NM_001040006 /// NM_006706 /// XM_005268365 /// XM_005268366 /// XM_005268367 /// XM_006714754 /// XR_245850 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from electronic annotation </td> <td> 66.65 </td> <td> 224.80 </td> <td> 2.94 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 214698_at </td> <td> 214698_at </td> <td> AW190873 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW190873 /FEA=EST /DB_XREF=gi:6465353 /DB_XREF=est:xl66a01.x1 /CLONE=IMAGE:2679624 /UG=Hs.145078 regulator of differentiation (in S. pombe) 1 </td> <td> AW190873 </td> <td> polypyrimidine tract binding protein 3 </td> <td> PTBP3 </td> <td> 9991 </td> <td> NM_001163788 /// NM_001163790 /// NM_001244896 /// NM_001244897 /// NM_001244898 /// NM_005156 /// XM_005252324 /// XM_006717343 /// XM_006717344 /// XM_006717345 /// XM_006717346 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0043249 // erythrocyte maturation // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -42.18 </td> <td> 55.64 </td> <td> -2.94 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200765_x_at </td> <td> 200765_x_at </td> <td> NM_001903 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001903.1 /DEF=Homo sapiens catenin (cadherin-associated protein), alpha 1 (102kD) (CTNNA1), mRNA.  /FEA=mRNA /GEN=CTNNA1 /PROD=catenin (cadherin-associated protein), alpha 1(102kD) /DB_XREF=gi:4503126 /UG=Hs.178452 catenin (cadherin-associated protein), alpha 1 (102kD) /FL=gb:L23805.1 gb:NM_001903.1 </td> <td> NM_001903 </td> <td> catenin (cadherin-associated protein), alpha 1, 102kDa </td> <td> CTNNA1 </td> <td> 1495 </td> <td> NM_001290307 /// NM_001290309 /// NM_001290310 /// NM_001290312 /// NM_001903 /// XM_005271898 /// XM_005271899 /// XM_006714536 </td> <td> 0001541 // ovarian follicle development // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016264 // gap junction assembly // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043297 // apical junction assembly // non-traceable author statement /// 0043627 // response to estrogen // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0071681 // cellular response to indole-3-methanol // inferred from direct assay /// 0090136 // epithelial cell-cell adhesion // inferred from electronic annotation /// 2000146 // negative regulation of cell motility // inferred from electronic annotation /// 2001045 // negative regulation of integrin-mediated signaling pathway // inferred from electronic annotation /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016342 // catenin complex // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0017166 // vinculin binding // inferred from physical interaction /// 0042043 // neurexin family protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0045295 // gamma-catenin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from physical interaction /// 0051015 // actin filament binding // inferred from electronic annotation </td> <td> -161.00 </td> <td> 889.30 </td> <td> -2.94 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201310_s_at </td> <td> 201310_s_at </td> <td> NM_004772 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004772.1 /DEF=Homo sapiens P311 protein (P311), mRNA. /FEA=mRNA /GEN=P311 /PROD=P311 protein /DB_XREF=gi:4758865 /UG=Hs.142827 P311 protein /FL=gb:U36189.1 gb:NM_004772.1 gb:U30521.1 </td> <td> NM_004772 </td> <td> neuronal regeneration related protein </td> <td> NREP </td> <td> 9315 </td> <td> NM_001142474 /// NM_001142475 /// NM_001142476 /// NM_001142477 /// NM_001142478 /// NM_001142479 /// NM_001142480 /// NM_001142481 /// NM_001142482 /// NM_001142483 /// NM_004772 /// XM_006714732 /// XM_006714733 </td> <td> 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 87.05 </td> <td> 278.10 </td> <td> 2.93 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212291_at </td> <td> 212291_at </td> <td> AI393355 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI393355 /FEA=EST /DB_XREF=gi:4222902 /DB_XREF=est:tg44d05.x1 /CLONE=IMAGE:2111625 /UG=Hs.12259 KIAA0630 protein </td> <td> AI393355 </td> <td> homeodomain interacting protein kinase 1 </td> <td> HIPK1 </td> <td> 204851 </td> <td> NM_152696 /// NM_181358 /// NM_198268 /// NM_198269 /// XM_005270609 /// XM_005270610 /// XM_005270611 /// XM_005270612 /// XM_005270613 /// XM_006710443 </td> <td> 0001654 // eye development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010803 // regulation of tumor necrosis factor-mediated signaling pathway // inferred from direct assay /// 0010842 // retina layer formation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016926 // protein desumoylation // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0060059 // embryonic retina morphogenesis in camera-type eye // inferred from electronic annotation /// 0060216 // definitive hemopoiesis // inferred from sequence or structural similarity /// 0060235 // lens induction in camera-type eye // inferred from electronic annotation /// 0061072 // iris morphogenesis // inferred from electronic annotation /// 0072577 // endothelial cell apoptotic process // inferred from direct assay /// 0097191 // extrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> -43.02 </td> <td> 66.44 </td> <td> -2.93 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 211954_s_at </td> <td> 211954_s_at </td> <td> BC000947 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BC000947.2 /DEF=Homo sapiens, clone IMAGE:3450586, mRNA, partial cds. /FEA=mRNA /PROD=Unknown (protein for IMAGE:3450586) /DB_XREF=gi:13111828 /UG=Hs.113503 karyopherin (importin) beta 3 /FL=gb:U72761.1 gb:NM_002271.1 </td> <td> BC000947 </td> <td> importin 5 </td> <td> IPO5 </td> <td> 3843 </td> <td> NM_002271 /// XM_005254049 /// XM_005254052 /// XM_005254053 </td> <td> 0006607 // NLS-bearing protein import into nucleus // inferred from sequence or structural similarity /// 0006610 // ribosomal protein import into nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042307 // positive regulation of protein import into nucleus // inferred from sequence or structural similarity /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0071230 // cellular response to amino acid stimulus // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005643 // nuclear pore // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005095 // GTPase inhibitor activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -92.38 </td> <td> 351.21 </td> <td> -2.93 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 211864_s_at </td> <td> 211864_s_at </td> <td> AF207990 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF207990.1 /DEF=Homo sapiens fer-1 like protein 3 (FER1L3) mRNA, complete cds. /FEA=CDS /GEN=FER1L3 /PROD=fer-1 like protein 3 /DB_XREF=gi:10834586 /UG=Hs.234680 fer-1 (C.elegans)-like 3 (myoferlin) /FL=gb:AF207990.1 </td> <td> AF207990 </td> <td> myoferlin </td> <td> MYOF </td> <td> 26509 </td> <td> NM_013451 /// NM_133337 /// XM_005269693 /// XM_005269694 /// XM_006717760 </td> <td> 0001778 // plasma membrane repair // inferred from sequence or structural similarity /// 0006936 // muscle contraction // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0030947 // regulation of vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0034605 // cellular response to heat // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005901 // caveola // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from direct assay /// 0005543 // phospholipid binding // inferred from sequence or structural similarity </td> <td> -151.38 </td> <td> 620.04 </td> <td> -2.93 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 222231_s_at </td> <td> 222231_s_at </td> <td> AK025328 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK025328.1 /DEF=Homo sapiens cDNA: FLJ21675 fis, clone COL09090, highly similar to AF119857 Homo sapiens PRO1855 mRNA.  /FEA=mRNA /DB_XREF=gi:10437822 /UG=Hs.283558 hypothetical protein PRO1855 </td> <td> AK025328 </td> <td> leucine rich repeat containing 59 </td> <td> LRRC59 </td> <td> 55379 </td> <td> NM_018509 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 111.55 </td> <td> 863.62 </td> <td> 2.93 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 210249_s_at </td> <td> 210249_s_at </td> <td> U59302 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U59302.1 /DEF=Human steroid receptor coactivator-1 F-SRC-1 mRNA, complete cds. /FEA=mRNA /PROD=steroid receptor coactivator-1 F-SRC-1 /DB_XREF=gi:1480645 /UG=Hs.74002 nuclear receptor coactivator 1 /FL=gb:U40396.1 gb:U59302.1 gb:U90661.1 gb:NM_003743.1 </td> <td> U59302 </td> <td> nuclear receptor coactivator 1 </td> <td> NCOA1 </td> <td> 8648 </td> <td> NM_003743 /// NM_147223 /// NM_147233 /// XM_005264625 /// XM_005264626 /// XM_005264627 /// XM_005264628 /// XM_006712126 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000435 // positive regulation of transcription from RNA polymerase II promoter by galactose // inferred from direct assay /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009725 // response to hormone // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0014807 // regulation of somitogenesis // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0042698 // ovulation cycle // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045925 // positive regulation of female receptivity // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0060179 // male mating behavior // inferred from electronic annotation /// 0060206 // estrous cycle phase // inferred from electronic annotation /// 0060594 // mammary gland specification // inferred from electronic annotation /// 0060713 // labyrinthine layer morphogenesis // inferred from electronic annotation /// 2001038 // regulation of cellular response to drug // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation </td> <td> 0001012 // RNA polymerase II regulatory region DNA binding // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0032403 // protein complex binding // inferred from electronic annotation /// 0033142 // progesterone receptor binding // inferred from electronic annotation /// 0035257 // nuclear hormone receptor binding // inferred from direct assay /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // non-traceable author statement /// 0071837 // HMG box domain binding // inferred from electronic annotation </td> <td> -32.05 </td> <td> 140.40 </td> <td> -2.93 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201675_at </td> <td> 201675_at </td> <td> NM_003488 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003488.1 /DEF=Homo sapiens A kinase (PRKA) anchor protein 1 (AKAP1), mRNA. /FEA=mRNA /GEN=AKAP1 /PROD=A kinase (PRKA) anchor protein 1 /DB_XREF=gi:4502014 /UG=Hs.78921 A kinase (PRKA) anchor protein 1 /FL=gb:BC000729.1 gb:NM_003488.1 </td> <td> NM_003488 </td> <td> A kinase (PRKA) anchor protein 1 </td> <td> AKAP1 </td> <td> 8165 </td> <td> NM_001242902 /// NM_001242903 /// NM_003488 /// NM_139275 /// XM_005257707 /// XM_005257709 /// XM_006722126 /// XM_006722127 /// XR_243684 </td> <td> 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 39.40 </td> <td> 151.25 </td> <td> 2.93 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 204559_s_at </td> <td> 204559_s_at </td> <td> NM_016199 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016199.1 /DEF=Homo sapiens U6 snRNA-associated Sm-like protein LSm7 (LOC51690), mRNA.  /FEA=mRNA /GEN=LOC51690 /PROD=U6 snRNA-associated Sm-like protein LSm7 /DB_XREF=gi:7706422 /UG=Hs.70830 U6 snRNA-associated Sm-like protein LSm7 /FL=gb:AF182293.1 gb:NM_016199.1 </td> <td> NM_016199 </td> <td> LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) </td> <td> LSM7 </td> <td> 51690 </td> <td> NM_016199 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // non-traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017070 // U6 snRNA binding // non-traceable author statement </td> <td> 71.35 </td> <td> 194.70 </td> <td> 2.92 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202874_s_at </td> <td> 202874_s_at </td> <td> NM_001695 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001695.1 /DEF=Homo sapiens ATPase, H+ transporting, lysosomal (vacuolar proton pump) 42kD (ATP6C), mRNA.  /FEA=mRNA /GEN=ATP6C /PROD=ATPase, H+ transporting, lysosomal (vacuolarproton pump) 42kD /DB_XREF=gi:4502314 /UG=Hs.86905 ATPase, H+ transporting, lysosomal (vacuolar proton pump) 42kD /FL=gb:NM_001695.1 </td> <td> NM_001695 </td> <td> ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 </td> <td> ATP6V1C1 </td> <td> 528 </td> <td> NM_001007254 /// NM_001695 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0033572 // transferrin transport // traceable author statement /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016469 // proton-transporting two-sector ATPase complex // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // traceable author statement </td> <td> -77.80 </td> <td> 176.07 </td> <td> -2.92 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212691_at </td> <td> 212691_at </td> <td> AW131863 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW131863 /FEA=EST /DB_XREF=gi:6133470 /DB_XREF=est:xf35f02.x1 /CLONE=IMAGE:2620059 /UG=Hs.30002 SH3-containing protein SH3GLB2 </td> <td> AW131863 </td> <td> nucleoporin 188kDa </td> <td> NUP188 </td> <td> 23511 </td> <td> NM_015354 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation </td> <td> 34.68 </td> <td> 103.24 </td> <td> 2.92 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202078_at </td> <td> 202078_at </td> <td> NM_003653 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003653.1 /DEF=Homo sapiens COP9 (constitutive photomorphogenic, Arabidopsis, homolog) subunit 3 (COPS3), mRNA.  /FEA=mRNA /GEN=COPS3 /PROD=COP9 (constitutive photomorphogenic,Arabidopsis, homolog) subunit 3 /DB_XREF=gi:4502974 /UG=Hs.6076 COP9 (constitutive photomorphogenic, Arabidopsis, homolog) subunit 3 /FL=gb:BC001891.1 gb:AF031647.1 gb:NM_003653.1 gb:AF098109.1 </td> <td> NM_003653 </td> <td> COP9 signalosome subunit 3 </td> <td> COPS3 </td> <td> 8533 </td> <td> NM_001199125 /// NM_003653 /// XM_005256837 /// XM_005256838 /// XM_005256839 /// XM_005256840 /// XM_005256841 /// XM_005256842 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0009416 // response to light stimulus // traceable author statement /// 0010388 // cullin deneddylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // COP9 signalosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 34.55 </td> <td> 159.75 </td> <td> 2.92 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 209209_s_at </td> <td> 209209_s_at </td> <td> AW469573 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW469573 /FEA=EST /DB_XREF=gi:7039679 /DB_XREF=est:hd29e09.x1 /CLONE=IMAGE:2910952 /UG=Hs.75260 mitogen inducible 2 /FL=gb:Z24725.1 </td> <td> AW469573 </td> <td> fermitin family member 2 </td> <td> FERMT2 </td> <td> 10979 </td> <td> NM_001134999 /// NM_001135000 /// NM_006832 /// XM_005267285 /// XM_006720008 /// XM_006720009 /// XM_006720010 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007160 // cell-matrix adhesion // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007229 // integrin-mediated signaling pathway // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0033622 // integrin activation // inferred from mutant phenotype /// 0034329 // cell junction assembly // traceable author statement /// 0034446 // substrate adhesion-dependent cell spreading // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from sequence or structural similarity /// 0072657 // protein localization to membrane // inferred from sequence or structural similarity </td> <td> 0001725 // stress fiber // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from direct assay /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0031674 // I band // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation </td> <td> -68.65 </td> <td> 209.82 </td> <td> -2.92 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202484_s_at </td> <td> 202484_s_at </td> <td> AF072242 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF072242.1 /DEF=Homo sapiens methyl-CpG binding protein MBD2 (MBD2) mRNA, complete cds.  /FEA=mRNA /GEN=MBD2 /PROD=methyl-CpG binding protein MBD2 /DB_XREF=gi:3800792 /UG=Hs.25674 methyl-CpG binding domain protein 2 /FL=gb:AF072242.1 gb:NM_003927.2 </td> <td> AF072242 </td> <td> methyl-CpG binding domain protein 2 </td> <td> MBD2 </td> <td> 8932 </td> <td> NM_003927 /// NM_015832 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042711 // maternal behavior // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0043623 // cellular protein complex assembly // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0000118 // histone deacetylase complex // inferred from electronic annotation /// 0000785 // chromatin // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003696 // satellite DNA binding // traceable author statement /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008327 // methyl-CpG binding // inferred from direct assay /// 0008327 // methyl-CpG binding // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0035197 // siRNA binding // inferred from electronic annotation /// 0070742 // C2H2 zinc finger domain binding // inferred from physical interaction </td> <td> 70.25 </td> <td> 321.50 </td> <td> 2.92 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 204059_s_at </td> <td> 204059_s_at </td> <td> NM_002395 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002395.2 /DEF=Homo sapiens malic enzyme 1, NADP(+)-dependent, cytosolic (ME1), mRNA.  /FEA=mRNA /GEN=ME1 /PROD=cytosolic malic enzyme 1 /DB_XREF=gi:13435400 /UG=Hs.14732 malic enzyme 1, NADP(+)-dependent, cytosolic /FL=gb:NM_002395.2 </td> <td> NM_002395 </td> <td> malic enzyme 1, NADP(+)-dependent, cytosolic </td> <td> ME1 </td> <td> 4199 </td> <td> NM_002395 </td> <td> 0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006108 // malate metabolic process // inferred from direct assay /// 0006741 // NADP biosynthetic process // traceable author statement /// 0009725 // response to hormone // inferred from sequence or structural similarity /// 0009743 // response to carbohydrate // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051262 // protein tetramerization // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement </td> <td> 0004470 // malic enzyme activity // inferred from direct assay /// 0004471 // malate dehydrogenase (decarboxylating) (NAD+) activity // inferred from electronic annotation /// 0004473 // malate dehydrogenase (decarboxylating) (NADP+) activity // inferred from direct assay /// 0004473 // malate dehydrogenase (decarboxylating) (NADP+) activity // inferred from sequence or structural similarity /// 0008948 // oxaloacetate decarboxylase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0043531 // ADP binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050661 // NADP binding // traceable author statement /// 0051287 // NAD binding // traceable author statement </td> <td> -62.82 </td> <td> 180.54 </td> <td> -2.92 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 217740_x_at </td> <td> 217740_x_at </td> <td> NM_000972 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000972.1 /DEF=Homo sapiens ribosomal protein L7a (RPL7A), mRNA. /FEA=mRNA /GEN=RPL7A /PROD=ribosomal protein L7a /DB_XREF=gi:4506660 /UG=Hs.99858 ribosomal protein L7a /FL=gb:BC005128.1 gb:M36072.1 gb:NM_000972.1 </td> <td> NM_000972 </td> <td> ribosomal protein L7a /// small nucleolar RNA, C/D box 24 /// small nucleolar RNA, C/D box 36A /// small nucleolar RNA, C/D box 36B </td> <td> RPL7A /// SNORD24 /// SNORD36A /// SNORD36B </td> <td> 6130 /// 26814 /// 26815 /// 26820 </td> <td> NM_000972 /// NR_000017 /// NR_002447 /// NR_002448 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1291.45 </td> <td> 4520.57 </td> <td> -2.92 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 203605_at </td> <td> 203605_at </td> <td> NM_003136 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003136.1 /DEF=Homo sapiens signal recognition particle 54kD (SRP54), mRNA. /FEA=mRNA /GEN=SRP54 /PROD=signal recognition particle 54kD /DB_XREF=gi:4507214 /UG=Hs.49346 signal recognition particle 54kD /FL=gb:U51920.1 gb:BC000652.1 gb:BC003389.1 gb:NM_003136.1 </td> <td> NM_003136 </td> <td> signal recognition particle 54kDa </td> <td> SRP54 </td> <td> 6729 </td> <td> NM_001146282 /// NM_003136 /// XM_005268024 </td> <td> 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // inferred by curator /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006616 // SRP-dependent cotranslational protein targeting to membrane, translocation // inferred from sequence or structural similarity /// 0006617 // SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0042493 // response to drug // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045047 // protein targeting to ER // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005786 // signal recognition particle, endoplasmic reticulum targeting // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0048500 // signal recognition particle // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0008144 // drug binding // inferred from direct assay /// 0008312 // 7S RNA binding // inferred from direct assay /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay /// 0030942 // endoplasmic reticulum signal peptide binding // inferred from direct assay /// 0043021 // ribonucleoprotein complex binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 66.08 </td> <td> 271.56 </td> <td> 2.92 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212461_at </td> <td> 212461_at </td> <td> BF793951 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF793951 /FEA=EST /DB_XREF=gi:12099005 /DB_XREF=est:602254576F1 /CLONE=IMAGE:4346922 /UG=Hs.278614 protease, serine, 15 </td> <td> BF793951 </td> <td> antizyme inhibitor 1 </td> <td> AZIN1 </td> <td> 51582 </td> <td> NM_015878 /// NM_148174 /// XM_005250969 </td> <td> 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // traceable author statement /// 0042978 // ornithine decarboxylase activator activity // inferred from electronic annotation </td> <td> 44.22 </td> <td> 276.46 </td> <td> 2.92 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208819_at </td> <td> 208819_at </td> <td> BC002977 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002977.1 /DEF=Homo sapiens, mel transforming oncogene (derived from cell line NK14)- RAB8 homolog, clone MGC:2196, mRNA, complete cds.  /FEA=mRNA /PROD=mel transforming oncogene (derived from cellline NK14)- RAB8 homolog /DB_XREF=gi:12804236 /UG=Hs.5947 mel transforming oncogene (derived from cell line NK14)- RAB8 homolog /FL=gb:BC002977.1 gb:NM_005370.2 </td> <td> BC002977 </td> <td> RAB8A, member RAS oncogene family </td> <td> RAB8A </td> <td> 4218 </td> <td> NM_005370 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // not recorded /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from direct assay /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048210 // Golgi vesicle fusion to target membrane // inferred from direct assay /// 0051223 // regulation of protein transport // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0072659 // protein localization to plasma membrane // inferred from sequence or structural similarity </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045335 // phagocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0017137 // Rab GTPase binding // inferred from sequence or structural similarity /// 0019003 // GDP binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from electronic annotation </td> <td> 51.10 </td> <td> 235.22 </td> <td> 2.91 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 211967_at </td> <td> 211967_at </td> <td> BG538627 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG538627 /FEA=EST /DB_XREF=gi:13530860 /DB_XREF=est:602567359F1 /CLONE=IMAGE:4691726 /UG=Hs.172089 Homo sapiens mRNA; cDNA DKFZp586I2022 (from clone DKFZp586I2022) </td> <td> BG538627 </td> <td> transmembrane protein 123 </td> <td> TMEM123 </td> <td> 114908 </td> <td> NM_052932 </td> <td> 0070267 // oncosis // inferred from direct assay </td> <td> 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement </td> <td> 0004872 // receptor activity // non-traceable author statement </td> <td> 133.20 </td> <td> 492.68 </td> <td> 2.91 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 209361_s_at </td> <td> 209361_s_at </td> <td> BC004153 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004153.1 /DEF=Homo sapiens, Similar to poly(rC)-binding protein 4, clone MGC:2386, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to poly(rC)-binding protein 4 /DB_XREF=gi:13278755 /UG=Hs.20930 poly(rC)-binding protein 4 /FL=gb:BC003008.1 gb:BC004153.1 </td> <td> BC004153 </td> <td> poly(rC) binding protein 4 </td> <td> PCBP4 </td> <td> 57060 </td> <td> NM_001174100 /// NM_020418 /// NM_033008 /// NM_033009 /// NM_033010 /// XM_005265330 /// XM_005265331 /// XM_005265332 /// XM_006713266 /// XM_006713267 /// XM_006713268 /// XM_006713269 /// XM_006713270 /// XM_006713271 </td> <td> 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from direct assay /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 35.70 </td> <td> 100.40 </td> <td> 2.91 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 211697_x_at </td> <td> 211697_x_at </td> <td> AF349314 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF349314.1 /DEF=Homo sapiens RNA-binding protein LOC56902 mRNA, complete cds. /FEA=mRNA /PROD=RNA-binding protein LOC56902 /DB_XREF=gi:13540364 /FL=gb:AF349314.1 </td> <td> AF349314 </td> <td> partner of NOB1 homolog (S. cerevisiae) </td> <td> PNO1 </td> <td> 56902 </td> <td> NM_020143 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -49.42 </td> <td> 213.31 </td> <td> -2.91 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 210950_s_at </td> <td> 210950_s_at </td> <td> BC003573 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003573.1 /DEF=Homo sapiens, farnesyl-diphosphate farnesyltransferase 1, clone MGC:2200, mRNA, complete cds.  /FEA=mRNA /PROD=farnesyl-diphosphate farnesyltransferase 1 /DB_XREF=gi:13097746 /UG=Hs.48876 farnesyl-diphosphate farnesyltransferase 1 /FL=gb:BC003573.1 </td> <td> BC003573 </td> <td> farnesyl-diphosphate farnesyltransferase 1 </td> <td> FDFT1 </td> <td> 2222 </td> <td> NM_001287742 /// NM_001287743 /// NM_001287744 /// NM_001287745 /// NM_001287747 /// NM_001287748 /// NM_001287749 /// NM_001287750 /// NM_001287751 /// NM_001287756 /// NM_004462 /// XM_006716247 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // traceable author statement /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045338 // farnesyl diphosphate metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004310 // farnesyl-diphosphate farnesyltransferase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016765 // transferase activity, transferring alkyl or aryl (other than methyl) groups // inferred from electronic annotation /// 0051996 // squalene synthase activity // inferred from electronic annotation </td> <td> 121.37 </td> <td> 334.11 </td> <td> 2.91 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200665_s_at </td> <td> 200665_s_at </td> <td> NM_003118 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003118.1 /DEF=Homo sapiens secreted protein, acidic, cysteine-rich (osteonectin) (SPARC), mRNA.  /FEA=mRNA /GEN=SPARC /PROD=secreted protein, acidic, cysteine-rich(osteonectin) /DB_XREF=gi:4507170 /UG=Hs.111779 secreted protein, acidic, cysteine-rich (osteonectin) /FL=gb:BC004974.1 gb:J03040.1 gb:NM_003118.1 </td> <td> NM_003118 </td> <td> secreted protein, acidic, cysteine-rich (osteonectin) </td> <td> SPARC </td> <td> 6678 </td> <td> NM_003118 </td> <td> 0001503 // ossification // inferred from electronic annotation /// 0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0007162 // negative regulation of cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009629 // response to gravity // inferred from electronic annotation /// 0010288 // response to lead ion // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043312 // neutrophil degranulation // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0060348 // bone development // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // non-traceable author statement /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031941 // filamentous actin // inferred from electronic annotation /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005518 // collagen binding // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation </td> <td> 214.95 </td> <td> 1566.55 </td> <td> 2.91 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202141_s_at </td> <td> 202141_s_at </td> <td> BC003090 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003090.1 /DEF=Homo sapiens, COP9 homolog, clone MGC:1297, mRNA, complete cds. /FEA=mRNA /PROD=COP9 homolog /DB_XREF=gi:13111846 /UG=Hs.75193 COP9 homolog /FL=gb:BC003090.1 gb:U51205.1 gb:NM_006710.1 </td> <td> BC003090 </td> <td> COP9 signalosome subunit 8 </td> <td> COPS8 </td> <td> 10920 </td> <td> NM_006710 /// NM_198189 </td> <td> 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0010388 // cullin deneddylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0008180 // COP9 signalosome // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 62.10 </td> <td> 396.20 </td> <td> 2.91 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212546_s_at </td> <td> 212546_s_at </td> <td> AI126634 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI126634 /FEA=EST /DB_XREF=gi:3595148 /DB_XREF=est:qd83b10.x1 /CLONE=IMAGE:1736059 /UG=Hs.169600 KIAA0826 protein </td> <td> AI126634 </td> <td> FRY-like </td> <td> FRYL </td> <td> 285527 </td> <td> NM_001039751 /// NM_015030 /// XM_005248082 /// XM_005248083 /// XM_005248084 /// XM_005248085 /// XM_005248086 /// XM_005248087 /// XM_005248088 /// XM_005248089 /// XM_005248090 /// XM_005248091 /// XM_005248093 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td>  </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -54.40 </td> <td> 218.50 </td> <td> -2.90 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208811_s_at </td> <td> 208811_s_at </td> <td> AF080569 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF080569.1 /DEF=Homo sapiens DnaJ-like 2 protein (HSJ2) mRNA, complete cds. /FEA=mRNA /GEN=HSJ2 /PROD=DnaJ-like 2 protein /DB_XREF=gi:4322314 /UG=Hs.181195 DnaJ (Hsp40) homolog, subfamily B, member 6 /FL=gb:AL136707.1 gb:BC000177.2 gb:AB014888.1 gb:AF080569.1 gb:NM_005494.1 gb:AF075601.1 gb:AF060703.1 gb:AB015799.1 </td> <td> AF080569 </td> <td> DnaJ (Hsp40) homolog, subfamily B, member 6 /// transmembrane protein 135 </td> <td> DNAJB6 /// TMEM135 </td> <td> 10049 /// 65084 </td> <td> NM_001168724 /// NM_005494 /// NM_022918 /// NM_058246 /// NR_033149 /// XM_005249515 /// XM_005249516 /// XM_006715823 /// XM_006718667 /// XM_006718668 </td> <td> 0006457 // protein folding // inferred from direct assay /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007031 // peroxisome organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0045109 // intermediate filament organization // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation /// 0060715 // syncytiotrophoblast cell differentiation involved in labyrinthine layer development // inferred from electronic annotation /// 0060717 // chorion development // inferred from electronic annotation /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005777 // peroxisome // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0001671 // ATPase activator activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> -42.08 </td> <td> 156.01 </td> <td> -2.90 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212359_s_at </td> <td> 212359_s_at </td> <td> W89120 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W89120 /FEA=EST /DB_XREF=gi:1404482 /DB_XREF=est:zh69b03.s1 /CLONE=IMAGE:417293 /UG=Hs.65135 KIAA0913 protein </td> <td> W89120 </td> <td> zinc finger, SWIM-type containing 8 </td> <td> ZSWIM8 </td> <td> 23053 </td> <td> NM_001242487 /// NM_001242488 /// NM_015037 /// XM_005269648 /// XM_005269649 /// XM_005269651 /// XM_005269652 /// XM_005269653 /// XM_005269655 /// XM_006717725 </td> <td>  </td> <td>  </td> <td> 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -42.90 </td> <td> 139.43 </td> <td> -2.90 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 218755_at </td> <td> 218755_at </td> <td> NM_005733 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005733.1 /DEF=Homo sapiens RAB6 interacting, kinesin-like (rabkinesin6) (RAB6KIFL), mRNA.  /FEA=mRNA /GEN=RAB6KIFL /PROD=RAB6 interacting, kinesin-like (rabkinesin6) /DB_XREF=gi:5032012 /UG=Hs.73625 RAB6 interacting, kinesin-like (rabkinesin6) /FL=gb:AF070672.1 gb:AF153329.1 gb:NM_005733.1 </td> <td> NM_005733 </td> <td> kinesin family member 20A </td> <td> KIF20A </td> <td> 10112 </td> <td> NM_005733 /// XM_006714514 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0000910 // cytokinesis // inferred from direct assay /// 0001578 // microtubule bundle formation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> 41.40 </td> <td> 158.57 </td> <td> 2.90 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 217526_at </td> <td> 217526_at </td> <td> AI478300 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI478300 /FEA=EST /DB_XREF=gi:4371526 /DB_XREF=est:tm39e01.x1 /CLONE=IMAGE:2160504 /UG=Hs.192789 ESTs, Weakly similar to ALU6_HUMAN ALU SUBFAMILY SP SEQUENCE CONTAMINATION WARNING ENTRY H.sapiens </td> <td> AI478300 </td> <td> nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein </td> <td> NFATC2IP </td> <td> 84901 </td> <td> NM_032815 </td> <td> 0001816 // cytokine production // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 57.05 </td> <td> 74.92 </td> <td> 2.90 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201532_at </td> <td> 201532_at </td> <td> NM_002788 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002788.1 /DEF=Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 3 (PSMA3), mRNA.  /FEA=mRNA /GEN=PSMA3 /PROD=proteasome (prosome, macropain) subunit, alphatype, 3 /DB_XREF=gi:4506182 /UG=Hs.167106 proteasome (prosome, macropain) subunit, alpha type, 3 /FL=gb:BC005265.1 gb:NM_002788.1 </td> <td> NM_002788 </td> <td> proteasome (prosome, macropain) subunit, alpha type, 3 </td> <td> PSMA3 </td> <td> 5684 </td> <td> NM_002788 /// NM_152132 /// NR_038123 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from direct assay /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 148.13 </td> <td> 701.04 </td> <td> 2.90 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202737_s_at </td> <td> 202737_s_at </td> <td> NM_012321 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012321.1 /DEF=Homo sapiens U6 snRNA-associated Sm-like protein (LSM4), mRNA. /FEA=mRNA /GEN=LSM4 /PROD=U6 snRNA-associated Sm-like protein /DB_XREF=gi:6912485 /UG=Hs.76719 U6 snRNA-associated Sm-like protein /FL=gb:BC000387.1 gb:BC003652.1 gb:AF182290.1 gb:AF117235.1 gb:NM_012321.1 gb:AF251218.1 </td> <td> NM_012321 </td> <td> LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) </td> <td> LSM4 </td> <td> 25804 </td> <td> NM_001252129 /// NM_012321 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005688 // U6 snRNP // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 40.97 </td> <td> 227.29 </td> <td> 2.90 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 203643_at </td> <td> 203643_at </td> <td> NM_006494 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006494.1 /DEF=Homo sapiens Ets2 repressor factor (ERF), mRNA. /FEA=mRNA /GEN=ERF /PROD=Ets2 repressor factor /DB_XREF=gi:5729813 /UG=Hs.333069 Ets2 repressor factor /FL=gb:U15655.1 gb:NM_006494.1 </td> <td> NM_006494 </td> <td> Ets2 repressor factor </td> <td> ERF </td> <td> 2077 </td> <td> NM_006494 /// XM_005258643 /// XM_005258644 /// XM_006723079 /// XM_006723080 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0007049 // cell cycle // non-traceable author statement /// 0010668 // ectodermal cell differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // not recorded /// 0060707 // trophoblast giant cell differentiation // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation </td> <td> 0005634 // nucleus // not recorded /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 29.88 </td> <td> 76.11 </td> <td> 2.90 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 206113_s_at </td> <td> 206113_s_at </td> <td> NM_004162 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004162.1 /DEF=Homo sapiens RAB5A, member RAS oncogene family (RAB5A), mRNA. /FEA=mRNA /GEN=RAB5A /PROD=RAB5A, member RAS oncogene family /DB_XREF=gi:4759003 /UG=Hs.73957 RAB5A, member RAS oncogene family /FL=gb:NM_004162.1 gb:M28215.1 </td> <td> NM_004162 </td> <td> RAB5A, member RAS oncogene family </td> <td> RAB5A </td> <td> 5868 </td> <td> NM_001292048 /// NM_004162 </td> <td> 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from mutant phenotype /// 0051489 // regulation of filopodium assembly // inferred from direct assay /// 2000286 // receptor internalization involved in canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043195 // terminal bouton // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay </td> <td> -59.40 </td> <td> 159.97 </td> <td> -2.90 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201951_at </td> <td> 201951_at </td> <td> BF242905 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF242905 /FEA=EST /DB_XREF=gi:11156833 /DB_XREF=est:601877949F1 /CLONE=IMAGE:4106028 /UG=Hs.10247 activated leucocyte cell adhesion molecule /FL=gb:NM_001627.1 gb:L38608.1 </td> <td> BF242905 </td> <td> activated leukocyte cell adhesion molecule </td> <td> ALCAM </td> <td> 214 </td> <td> NM_001243280 /// NM_001243281 /// NM_001243283 /// NM_001627 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008045 // motor neuron axon guidance // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -129.63 </td> <td> 282.46 </td> <td> -2.90 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 222158_s_at </td> <td> 222158_s_at </td> <td> AF229834 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF229834.1 /DEF=Homo sapiens apoptosis-related protein PNAS-4 (PNAS-4) mRNA, partial cds.  /FEA=mRNA /GEN=PNAS-4 /PROD=apoptosis-related protein PNAS-4 /DB_XREF=gi:7229639 /UG=Hs.42409 CGI-146 protein </td> <td> AF229834 </td> <td> desumoylating isopeptidase 2 </td> <td> DESI2 </td> <td> 51029 </td> <td> NM_016076 /// XM_005273154 </td> <td> 0006508 // proteolysis // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -100.78 </td> <td> 263.31 </td> <td> -2.89 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201416_at </td> <td> 201416_at </td> <td> BG528420 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG528420 /FEA=EST /DB_XREF=gi:13519957 /DB_XREF=est:602579853F1 /CLONE=IMAGE:4719060 /UG=Hs.83484 SRY (sex determining region Y)-box 4 /FL=gb:NM_003107.1 </td> <td> BG528420 </td> <td> SRY (sex determining region Y)-box 4 </td> <td> SOX4 </td> <td> 6659 </td> <td> NM_003107 </td> <td> 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001841 // neural tube formation // inferred from sequence or structural similarity /// 0002328 // pro-B cell differentiation // inferred from sequence or structural similarity /// 0003183 // mitral valve morphogenesis // inferred from sequence or structural similarity /// 0003211 // cardiac ventricle formation // inferred from sequence or structural similarity /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0003289 // atrial septum primum morphogenesis // inferred from sequence or structural similarity /// 0003357 // noradrenergic neuron differentiation // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0014009 // glial cell proliferation // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021522 // spinal cord motor neuron differentiation // inferred from sequence or structural similarity /// 0021782 // glial cell development // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035910 // ascending aorta morphogenesis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042769 // DNA damage response, detection of DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046826 // negative regulation of protein export from nucleus // inferred from mutant phenotype /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0060070 // canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 0060174 // limb bud formation // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060548 // negative regulation of cell death // inferred from sequence or structural similarity /// 0060563 // neuroepithelial cell differentiation // inferred from sequence or structural similarity /// 0060993 // kidney morphogenesis // inferred from sequence or structural similarity /// 0071333 // cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 2000761 // positive regulation of N-terminal peptidyl-lysine acetylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0001071 // nucleic acid binding transcription factor activity // inferred from mutant phenotype /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> -434.58 </td> <td> 943.21 </td> <td> -2.89 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202325_s_at </td> <td> 202325_s_at </td> <td> NM_001685 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001685.1 /DEF=Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F6 (ATP5J), mRNA.  /FEA=mRNA /GEN=ATP5J /PROD=ATP synthase, H+ transporting, mitochondrial /DB_XREF=gi:4502292 /UG=Hs.73851 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F6 /FL=gb:M37104.1 gb:M73031.1 gb:NM_001685.1 gb:AL110183.1 </td> <td> NM_001685 </td> <td> ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 </td> <td> ATP5J </td> <td> 522 </td> <td> NM_001003696 /// NM_001003697 /// NM_001003701 /// NM_001003703 /// NM_001685 /// XM_005260992 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator </td> <td> 147.97 </td> <td> 572.16 </td> <td> 2.89 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208628_s_at </td> <td> 208628_s_at </td> <td> BC002411 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002411.1 /DEF=Homo sapiens, Similar to Y box protein 1, clone MGC:8655, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to Y box protein 1 /DB_XREF=gi:12803206 /UG=Hs.74497 nuclease sensitive element binding protein 1 /FL=gb:BC002411.1 </td> <td> BC002411 </td> <td> Y box binding protein 1 </td> <td> YBX1 </td> <td> 4904 </td> <td> NM_004559 /// XM_005270904 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement /// 0051154 // negative regulation of striated muscle cell differentiation // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from sequence or structural similarity </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 102.22 </td> <td> 1628.54 </td> <td> 2.89 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 211296_x_at </td> <td> 211296_x_at </td> <td> AB009010 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB009010.1 /DEF=Homo sapiens mRNA for polyubiquitin UbC, complete cds. /FEA=mRNA /GEN=UbC1 /PROD=polyubiquitin UbC /DB_XREF=gi:2647407 /UG=Hs.183704 ubiquitin C /FL=gb:BC000449.1 gb:AB009010.1 </td> <td> AB009010 </td> <td> ubiquitin C </td> <td> UBC </td> <td> 7316 </td> <td> NM_021009 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005978 // glycogen biosynthetic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007144 // female meiosis I // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010992 // ubiquitin homeostasis // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019082 // viral protein processing // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0021888 // hypothalamus gonadotrophin-releasing hormone neuron development // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0032479 // regulation of type I interferon production // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0060613 // fat pad development // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0071456 // cellular response to hypoxia // traceable author statement /// 0072520 // seminiferous tubule development // inferred from electronic annotation /// 0075733 // intracellular transport of virus // traceable author statement /// 0097009 // energy homeostasis // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0030666 // endocytic vesicle membrane // traceable author statement </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1733.40 </td> <td> 4908.43 </td> <td> -2.89 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208264_s_at </td> <td> 208264_s_at </td> <td> NM_003758 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003758.1 /DEF=Homo sapiens eukaryotic translation initiation factor 3, subunit 1 (alpha, 35kD) (EIF3S1), mRNA.  /FEA=mRNA /GEN=EIF3S1 /PROD=eukaryotic translation initiation factor 3,subunit 1 (alpha, 35kD) /DB_XREF=gi:4503510 /UG=Hs.173987 eukaryotic translation initiation factor 3, subunit 1 (alpha, 35kD) /FL=gb:U97670.1 gb:NM_003758.1 </td> <td> NM_003758 </td> <td> eukaryotic translation initiation factor 3, subunit J </td> <td> EIF3J </td> <td> 8669 </td> <td> NM_001284335 /// NM_001284336 /// NM_003758 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation </td> <td> 0003743 // translation initiation factor activity // inferred by curator /// 0005515 // protein binding // inferred from physical interaction </td> <td> 29.10 </td> <td> 71.90 </td> <td> 2.89 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 203185_at </td> <td> 203185_at </td> <td> NM_014737 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014737.1 /DEF=Homo sapiens Ras association (RalGDSAF-6) domain family 2 (RASSF2), mRNA.  /FEA=mRNA /GEN=RASSF2 /PROD=Ras association (RalGDSAF-6) domain family 2 /DB_XREF=gi:7661963 /UG=Hs.80905 Ras association (RalGDSAF-6) domain family 2 /FL=gb:D79990.1 gb:NM_014737.1 </td> <td> NM_014737 </td> <td> Ras association (RalGDS/AF-6) domain family member 2 </td> <td> RASSF2 </td> <td> 9770 </td> <td> NM_014737 /// NM_170774 /// XM_005260895 /// XM_006723668 /// XM_006723669 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 65.30 </td> <td> 176.70 </td> <td> 2.89 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201226_at </td> <td> 201226_at </td> <td> NM_005004 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005004.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8 (19kD, ASHI) (NDUFB8), mRNA.  /FEA=mRNA /GEN=NDUFB8 /PROD=NADH dehydrogenase (ubiquinone) 1 betasubcomplex, 8 (19kD, ASHI) /DB_XREF=gi:4826853 /UG=Hs.198273 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8 (19kD, ASHI) /FL=gb:BC000466.1 gb:AF044958.1 gb:AF077028.1 gb:NM_005004.1 gb:AL080056.1 </td> <td> NM_005004 </td> <td> NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa </td> <td> NDUFB8 </td> <td> 4714 </td> <td> NM_001284367 /// NM_001284368 /// NM_005004 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0003954 // NADH dehydrogenase activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> -92.65 </td> <td> 506.07 </td> <td> -2.89 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200742_s_at </td> <td> 200742_s_at </td> <td> BG231932 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG231932 /FEA=EST /DB_XREF=gi:12727071 /DB_XREF=est:naf34b12.x1 /CLONE=IMAGE:4142926 /UG=Hs.20478 ceroid-lipofuscinosis, neuronal 2, late infantile (Jansky-Bielschowsky disease) /FL=gb:AF017456.1 gb:NM_000391.2 </td> <td> BG231932 </td> <td> tripeptidyl peptidase I </td> <td> TPP1 </td> <td> 1200 </td> <td> NM_000391 </td> <td> 0006508 // proteolysis // inferred from mutant phenotype /// 0006629 // lipid metabolic process // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007040 // lysosome organization // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0030163 // protein catabolic process // non-traceable author statement /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0043171 // peptide catabolic process // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045453 // bone resorption // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from sequence or structural similarity </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from mutant phenotype /// 0042470 // melanosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from direct assay /// 0004175 // endopeptidase activity // inferred from mutant phenotype /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from mutant phenotype /// 0008236 // serine-type peptidase activity // inferred from mutant phenotype /// 0008240 // tripeptidyl-peptidase activity // inferred from direct assay /// 0008240 // tripeptidyl-peptidase activity // inferred from mutant phenotype /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -63.95 </td> <td> 355.57 </td> <td> -2.89 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202724_s_at </td> <td> 202724_s_at </td> <td> NM_002015 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002015.2 /DEF=Homo sapiens forkhead box O1A (rhabdomyosarcoma) (FOXO1A), mRNA. /FEA=mRNA /GEN=FOXO1A /PROD=forkhead box O1A /DB_XREF=gi:9257221 /UG=Hs.170133 forkhead box O1A (rhabdomyosarcoma) /FL=gb:AF032885.1 gb:U02310.1 gb:NM_002015.2 </td> <td> NM_002015 </td> <td> forkhead box O1 </td> <td> FOXO1 </td> <td> 2308 </td> <td> NM_002015 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001568 // blood vessel development // not recorded /// 0001659 // temperature homeostasis // inferred from sequence or structural similarity /// 0001678 // cellular glucose homeostasis // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006473 // protein acetylation // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from sequence or structural similarity /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007389 // pattern specification process // not recorded /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009267 // cellular response to starvation // inferred from direct assay /// 0009267 // cellular response to starvation // inferred from sequence or structural similarity /// 0009790 // embryo development //  /// 0009888 // tissue development // not recorded /// 0010508 // positive regulation of autophagy // inferred from mutant phenotype /// 0031018 // endocrine pancreas development // traceable author statement /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0032873 // negative regulation of stress-activated MAPK cascade // inferred from direct assay /// 0034599 // cellular response to oxidative stress // inferred from sequence or structural similarity /// 0035947 // regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045444 // fat cell differentiation // inferred from sequence or structural similarity /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045722 // positive regulation of gluconeogenesis // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0070417 // cellular response to cold // inferred from sequence or structural similarity /// 0071455 // cellular response to hyperoxia // inferred from direct assay /// 0071732 // cellular response to nitric oxide // inferred from sequence or structural similarity /// 2000505 // regulation of energy homeostasis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement </td> <td> 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008301 // DNA binding, bending // not recorded /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0051721 // protein phosphatase 2A binding // inferred from sequence or structural similarity </td> <td> -52.18 </td> <td> 163.89 </td> <td> -2.89 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212663_at </td> <td> 212663_at </td> <td> AB014574 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB014574.1 /DEF=Homo sapiens mRNA for KIAA0674 protein, partial cds. /FEA=mRNA /GEN=KIAA0674 /PROD=KIAA0674 protein /DB_XREF=gi:3327161 /UG=Hs.14799 KIAA0674 protein </td> <td> AB014574 </td> <td> FK506 binding protein 15, 133kDa </td> <td> FKBP15 </td> <td> 23307 </td> <td> NM_015258 /// XM_006717018 /// XM_006717019 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation </td> <td> 29.57 </td> <td> 157.36 </td> <td> 2.89 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 46665_at </td> <td> 46665_at </td> <td> AI949392 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI949392:wq11a04.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2470926 /clone_end=3' /gb=AI949392 /gi=5741790 /ug=Hs.7188 /len=596 </td> <td> AI949392 </td> <td> sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C </td> <td> SEMA4C </td> <td> 54910 </td> <td> NM_017789 /// XM_006712606 </td> <td> 0001843 // neural tube closure // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0021535 // cell migration in hindbrain // inferred from sequence or structural similarity /// 0021549 // cerebellum development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from direct assay /// 0042692 // muscle cell differentiation // inferred from direct assay /// 0071526 // semaphorin-plexin signaling pathway // inferred from sequence or structural similarity </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -37.00 </td> <td> 82.20 </td> <td> -2.88 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 213396_s_at </td> <td> 213396_s_at </td> <td> AA456929 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA456929 /FEA=EST /DB_XREF=gi:2179649 /DB_XREF=est:aa90c03.s1 /CLONE=IMAGE:838564 /UG=Hs.75456 A kinase (PRKA) anchor protein 10 </td> <td> AA456929 </td> <td> A kinase (PRKA) anchor protein 10 </td> <td> AKAP10 </td> <td> 11216 </td> <td> NM_007202 /// XM_006721431 /// XM_006721432 /// XM_006721433 /// XR_243536 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0016301 // kinase activity // inferred from electronic annotation </td> <td> -41.97 </td> <td> 102.86 </td> <td> -2.88 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208983_s_at </td> <td> 208983_s_at </td> <td> M37780 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M37780.1 /DEF=Human leukocyte surface protein (CD31) mRNA, complete cds. /FEA=mRNA /GEN=CD31 /PROD=leukocyte surface protein /DB_XREF=gi:187239 /UG=Hs.78146 plateletendothelial cell adhesion molecule (CD31 antigen) /FL=gb:M37780.1 gb:M28526.1 gb:NM_000442.1 </td> <td> M37780 </td> <td> platelet/endothelial cell adhesion molecule 1 </td> <td> PECAM1 </td> <td> 5175 </td> <td> NM_000442 /// XM_005276880 /// XM_005276881 /// XM_005276882 /// XM_005276883 /// XM_006721944 /// XM_006721945 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0006909 // phagocytosis // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008037 // cell recognition // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0050904 // diapedesis // inferred from direct assay /// 0072011 // glomerular endothelium development // inferred from expression pattern </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -193.27 </td> <td> 953.99 </td> <td> -2.88 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 203733_at </td> <td> 203733_at </td> <td> NM_014015 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014015.2 /DEF=Homo sapiens MYLE protein (MYLE), mRNA. /FEA=mRNA /GEN=MYLE /PROD=MYLE protein /DB_XREF=gi:13384596 /UG=Hs.11902 MYLE protein /FL=gb:BC001083.1 gb:AF108145.2 gb:NM_014015.2 </td> <td> NM_014015 </td> <td> Dexi homolog (mouse) </td> <td> DEXI </td> <td> 28955 </td> <td> NM_014015 </td> <td>  </td> <td>  </td> <td>  </td> <td> 30.35 </td> <td> 116.53 </td> <td> 2.88 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200044_at </td> <td> 200044_at </td> <td> NM_003769 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003769.1 /DEF=Homo sapiens splicing factor, arginineserine-rich 9 (SFRS9), mRNA. /FEA=mRNA /GEN=SFRS9 /PROD=splicing factor, arginineserine-rich 9 /DB_XREF=gi:4506902 /UG=Hs.77608 splicing factor, arginineserine-rich 9 /FL=gb:U30825.1 gb:NM_003769.1 </td> <td> NM_003769 </td> <td> glutamyl-tRNA(Gln) amidotransferase, subunit C /// serine/arginine-rich splicing factor 9 </td> <td> GATC /// SRSF9 </td> <td> 8683 /// 283459 </td> <td> NM_003769 /// NM_176818 /// NR_033684 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006450 // regulation of translational fidelity // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0032543 // mitochondrial translation // inferred from mutant phenotype /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0070681 // glutaminyl-tRNAGln biosynthesis via transamidation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0030956 // glutamyl-tRNA(Gln) amidotransferase complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016884 // carbon-nitrogen ligase activity, with glutamine as amido-N-donor // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050567 // glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity // inferred from direct assay </td> <td> 65.25 </td> <td> 589.83 </td> <td> 2.88 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201299_s_at </td> <td> 201299_s_at </td> <td> NM_018221 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018221.1 /DEF=Homo sapiens hypothetical protein FLJ10788 (FLJ10788), mRNA. /FEA=mRNA /GEN=FLJ10788 /PROD=hypothetical protein FLJ10788 /DB_XREF=gi:8922670 /UG=Hs.196437 hypothetical protein FLJ10788 /FL=gb:AB016839.1 gb:BC003398.1 gb:NM_018221.1 </td> <td> NM_018221 </td> <td> MOB kinase activator 1A </td> <td> MOB1A </td> <td> 55233 </td> <td> NM_018221 </td> <td> 0035329 // hippo signaling // inferred from direct assay /// 0035329 // hippo signaling // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 55.75 </td> <td> 104.27 </td> <td> 2.88 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 218497_s_at </td> <td> 218497_s_at </td> <td> NM_002936 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002936.1 /DEF=Homo sapiens ribonuclease H1 (RNASEH1), mRNA. /FEA=mRNA /GEN=RNASEH1 /PROD=ribonuclease H1 /DB_XREF=gi:4506554 /UG=Hs.178655 ribonuclease H1 /FL=gb:BC002973.1 gb:AF048994.1 gb:AF048995.1 gb:AF039652.1 gb:NM_002936.1 </td> <td> NM_002936 </td> <td> ribonuclease H1 </td> <td> RNASEH1 </td> <td> 246243 </td> <td> NM_001286834 /// NM_001286837 /// NM_002936 /// XR_244873 </td> <td> 0006264 // mitochondrial DNA replication // inferred from electronic annotation /// 0006401 // RNA catabolic process // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090501 // RNA phosphodiester bond hydrolysis // traceable author statement /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004523 // RNA-DNA hybrid ribonuclease activity // inferred from electronic annotation /// 0004540 // ribonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 47.45 </td> <td> 138.22 </td> <td> 2.88 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 217796_s_at </td> <td> 217796_s_at </td> <td> NM_017921 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017921.1 /DEF=Homo sapiens hypothetical protein FLJ20657 (FLJ20657), mRNA. /FEA=mRNA /GEN=FLJ20657 /PROD=hypothetical protein FLJ20657 /DB_XREF=gi:8923608 /UG=Hs.164256 hypothetical protein FLJ20657 /FL=gb:NM_017921.1 </td> <td> NM_017921 </td> <td> nuclear protein localization 4 homolog (S. cerevisiae) </td> <td> NPLOC4 </td> <td> 55666 </td> <td> NM_017921 </td> <td> 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0061025 // membrane fusion // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 60.50 </td> <td> 204.82 </td> <td> 2.88 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 209137_s_at </td> <td> 209137_s_at </td> <td> BC000263 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000263.1 /DEF=Homo sapiens, Similar to ubiquintin c-terminal hydrolase related polypeptide, clone MGC:2621, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to ubiquintin c-terminal hydrolaserelated polypeptide /DB_XREF=gi:12653004 /UG=Hs.78829 ubiquitin specific protease 10 /FL=gb:BC000263.1 </td> <td> BC000263 </td> <td> ubiquitin specific peptidase 10 </td> <td> USP10 </td> <td> 9100 </td> <td> NM_001272075 /// NM_005153 /// NR_073577 /// NR_073578 /// XM_006721330 /// XM_006721331 /// XM_006721332 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0010506 // regulation of autophagy // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0002039 // p53 binding // inferred from physical interaction /// 0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -66.25 </td> <td> 214.97 </td> <td> -2.88 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 204083_s_at </td> <td> 204083_s_at </td> <td> NM_003289 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003289.1 /DEF=Homo sapiens tropomyosin 2 (beta) (TPM2), mRNA. /FEA=mRNA /GEN=TPM2 /PROD=tropomyosin 2 (beta) /DB_XREF=gi:4507648 /UG=Hs.300772 tropomyosin 2 (beta) /FL=gb:M75165.1 gb:M12125.1 gb:M74817.1 gb:NM_003289.1 </td> <td> NM_003289 </td> <td> tropomyosin 2 (beta) </td> <td> TPM2 </td> <td> 7169 </td> <td> NM_001145822 /// NM_003289 /// NM_213674 /// XM_005251566 /// XM_005251567 /// XM_005251568 /// XM_005251569 /// XM_005251570 /// XM_005251571 /// XM_005251572 </td> <td> 0006936 // muscle contraction // traceable author statement /// 0030049 // muscle filament sliding // traceable author statement /// 0043462 // regulation of ATPase activity // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005862 // muscle thin filament tropomyosin // traceable author statement </td> <td> 0003779 // actin binding // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // traceable author statement </td> <td> 44.13 </td> <td> 172.21 </td> <td> 2.87 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 204797_s_at </td> <td> 204797_s_at </td> <td> NM_004434 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004434.1 /DEF=Homo sapiens echinoderm microtubule-associated protein-like (EMAPL), mRNA.  /FEA=mRNA /GEN=EMAPL /PROD=echinoderm microtubule-associated protein-like /DB_XREF=gi:4758267 /UG=Hs.12451 echinoderm microtubule-associated protein-like /FL=gb:U97018.1 gb:NM_004434.1 </td> <td> NM_004434 </td> <td> echinoderm microtubule associated protein like 1 </td> <td> EML1 </td> <td> 2009 </td> <td> NM_001008707 /// NM_004434 /// XM_005267397 /// XM_005267398 /// XM_005267399 /// XM_005267400 /// XM_006720074 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from sequence or structural similarity /// 0007052 // mitotic spindle organization // inferred from sequence or structural similarity /// 0007405 // neuroblast proliferation // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from mutant phenotype /// 0007420 // brain development // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0097431 // mitotic spindle pole // inferred from sequence or structural similarity /// 1990023 // mitotic spindle midzone // inferred from sequence or structural similarity </td> <td> 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0015631 // tubulin binding // inferred from direct assay </td> <td> 53.70 </td> <td> 111.92 </td> <td> 2.87 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 219657_s_at </td> <td> 219657_s_at </td> <td> NM_016531 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016531.1 /DEF=Homo sapiens hBKLF for basic kruppel like factor (LOC51274), mRNA. /FEA=mRNA /GEN=LOC51274 /PROD=hBKLF for basic kruppel like factor /DB_XREF=gi:7706076 /UG=Hs.119640 hBKLF for basic kruppel like factor /FL=gb:AF285837.1 gb:AB024523.1 gb:NM_016531.1 </td> <td> NM_016531 </td> <td> Kruppel-like factor 3 (basic) </td> <td> KLF3 </td> <td> 51274 </td> <td> NM_016531 /// XM_006714015 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 1901653 // cellular response to peptide // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -48.10 </td> <td> 92.92 </td> <td> -2.87 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 218335_x_at </td> <td> 218335_x_at </td> <td> NM_024309 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024309.1 /DEF=Homo sapiens hypothetical protein MGC4289 (MGC4289), mRNA. /FEA=mRNA /GEN=MGC4289 /PROD=hypothetical protein MGC4289 /DB_XREF=gi:13236543 /UG=Hs.288991 hypothetical protein MGC4289 /FL=gb:BC002740.1 gb:NM_024309.1 </td> <td> NM_024309 </td> <td> TNFAIP3 interacting protein 2 </td> <td> TNIP2 </td> <td> 79155 </td> <td> NM_001161527 /// NM_001292016 /// NM_024309 /// XM_005248010 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0023035 // CD40 signaling pathway // inferred from sequence or structural similarity /// 0034134 // toll-like receptor 2 signaling pathway // inferred from sequence or structural similarity /// 0034138 // toll-like receptor 3 signaling pathway // inferred from sequence or structural similarity /// 0034162 // toll-like receptor 9 signaling pathway // inferred from sequence or structural similarity /// 0043032 // positive regulation of macrophage activation // inferred from sequence or structural similarity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050871 // positive regulation of B cell activation // inferred from sequence or structural similarity /// 0070498 // interleukin-1-mediated signaling pathway // inferred from sequence or structural similarity /// 0071222 // cellular response to lipopolysaccharide // inferred from sequence or structural similarity /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from direct assay /// 0031593 // polyubiquitin binding // inferred from direct assay </td> <td> -55.12 </td> <td> 328.01 </td> <td> -2.87 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212509_s_at </td> <td> 212509_s_at </td> <td> BF968134 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF968134 /FEA=EST /DB_XREF=gi:12335349 /DB_XREF=est:602269121F1 /CLONE=IMAGE:4357349 /UG=Hs.250723 FK506 binding protein 12-rapamycin associated protein 1 </td> <td> BF968134 </td> <td> matrix-remodelling associated 7 </td> <td> MXRA7 </td> <td> 439921 </td> <td> NM_001008528 /// NM_001008529 /// NM_198530 /// XM_005257382 /// XM_005257383 /// XM_005257384 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 239.67 </td> <td> 865.79 </td> <td> 2.87 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 34187_at </td> <td> 34187_at </td> <td> D28483 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. D28483:Human scr3 mRNA for RNA binding protein SCR3, complete cds /cds=(16,1239) /gb=D28483 /gi=520589 /ug=Hs.20938 /len=1509 </td> <td> D28483 </td> <td> RNA binding motif, single stranded interacting protein 2 </td> <td> RBMS2 </td> <td> 5939 </td> <td> NM_002898 /// XM_005269059 /// XM_005269060 /// XM_005269061 /// XM_005269066 /// XM_006719541 /// XM_006719542 /// XM_006719543 /// XM_006719544 /// XM_006719545 </td> <td> 0006396 // RNA processing // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -42.27 </td> <td> 75.44 </td> <td> -2.86 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 211105_s_at </td> <td> 211105_s_at </td> <td> U80918 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U80918.1 /DEF=Homo sapiens transcription factor (NF-ATcC) mRNA, complete cds. /FEA=mRNA /GEN=NF-ATcC /PROD=transcription factor /DB_XREF=gi:4098860 /UG=Hs.96149 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 /FL=gb:U80918.1 </td> <td> U80918 </td> <td> nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 </td> <td> NFATC1 </td> <td> 4772 </td> <td> NM_001278669 /// NM_001278670 /// NM_001278672 /// NM_001278673 /// NM_001278675 /// NM_006162 /// NM_172387 /// NM_172388 /// NM_172389 /// NM_172390 /// XM_006722477 /// XM_006722478 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement </td> <td> 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001085 // RNA polymerase II transcription factor binding // inferred from sequence or structural similarity /// 0001205 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005528 // FK506 binding // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0048273 // mitogen-activated protein kinase p38 binding // inferred from sequence or structural similarity </td> <td> -34.40 </td> <td> 73.45 </td> <td> -2.86 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208787_at </td> <td> 208787_at </td> <td> BC003375 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003375.1 /DEF=Homo sapiens, mitochondrial ribosomal protein L3, clone MGC:5219, mRNA, complete cds.  /FEA=mRNA /PROD=mitochondrial ribosomal protein L3 /DB_XREF=gi:13097224 /UG=Hs.79086 mitochondrial ribosomal protein L3 /FL=gb:BC003375.1 gb:NM_007208.1 </td> <td> BC003375 </td> <td> mitochondrial ribosomal protein L3 </td> <td> MRPL3 </td> <td> 11222 </td> <td> NM_007208 </td> <td> 0006412 // translation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 78.15 </td> <td> 476.25 </td> <td> 2.86 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 213360_s_at </td> <td> 213360_s_at </td> <td> AA514622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA514622 /FEA=EST /DB_XREF=gi:2254222 /DB_XREF=est:nf55c12.s1 /CLONE=IMAGE:923830 /UG=Hs.295112 KIAA0618 gene product </td> <td> AA514622 </td> <td> POM121 transmembrane nucleoporin /// POM121 transmembrane nucleoporin C </td> <td> POM121 /// POM121C </td> <td> 9883 /// 100101267 </td> <td> NM_001099415 /// NM_001257190 /// NM_172020 /// XM_005250082 /// XM_005250726 /// XM_005250727 /// XM_005250728 /// XM_005250729 /// XM_005250730 /// XM_005250731 /// XM_005250732 /// XM_006716194 /// XM_006716195 /// XM_006716196 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -95.25 </td> <td> 574.62 </td> <td> -2.86 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201501_s_at </td> <td> 201501_s_at </td> <td> NM_002092 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002092.1 /DEF=Homo sapiens G-rich RNA sequence binding factor 1 (GRSF1), mRNA. /FEA=mRNA /GEN=GRSF1 /PROD=G-rich RNA sequence binding factor 1 /DB_XREF=gi:4504160 /UG=Hs.79295 G-rich RNA sequence binding factor 1 /FL=gb:NM_002092.1 gb:U07231.1 </td> <td> NM_002092 </td> <td> G-rich RNA sequence binding factor 1 </td> <td> GRSF1 </td> <td> 2926 </td> <td> NM_001098477 /// NM_002092 /// XM_005265681 /// XM_005265685 </td> <td> 0006378 // mRNA polyadenylation // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003729 // mRNA binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 40.80 </td> <td> 109.97 </td> <td> 2.86 </td> <td> 0.02 </td> <td> 0.04 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200972_at </td> <td> 200972_at </td> <td> BC000704 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000704.1 /DEF=Homo sapiens, tetraspan 3, clone MGC:965, mRNA, complete cds. /FEA=mRNA /PROD=tetraspan 3 /DB_XREF=gi:12653830 /UG=Hs.100090 tetraspan 3 /FL=gb:BC000704.1 gb:BC004280.1 gb:AF054840.1 gb:NM_005724.1 gb:AF133423.1 </td> <td> BC000704 </td> <td> tetraspanin 3 </td> <td> TSPAN3 </td> <td> 10099 </td> <td> NM_001168412 /// NM_005724 /// NM_198902 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> 62.08 </td> <td> 715.14 </td> <td> 2.86 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201033_x_at </td> <td> 201033_x_at </td> <td> NM_001002 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001002.1 /DEF=Homo sapiens ribosomal protein, large, P0 (RPLP0), mRNA. /FEA=mRNA /GEN=RPLP0 /PROD=ribosomal protein, large, P0 /DB_XREF=gi:4506666 /UG=Hs.73742 ribosomal protein, large, P0 /FL=gb:BC000345.1 gb:BC000752.1 gb:BC001127.1 gb:AF274958.1 gb:BC001834.1 gb:M17885.1 gb:NM_001002.1 </td> <td> NM_001002 </td> <td> ribosomal protein, large, P0 </td> <td> RPLP0 </td> <td> 6175 </td> <td> NM_001002 /// NM_053275 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -918.93 </td> <td> 4691.34 </td> <td> -2.86 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 204222_s_at </td> <td> 204222_s_at </td> <td> NM_006851 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006851.1 /DEF=Homo sapiens glioma pathogenesis-related protein (RTVP1), mRNA. /FEA=mRNA /GEN=RTVP1 /PROD=glioma pathogenesis-related protein /DB_XREF=gi:5803150 /UG=Hs.64639 glioma pathogenesis-related protein /FL=gb:U16307.1 gb:NM_006851.1 </td> <td> NM_006851 </td> <td> GLI pathogenesis-related 1 </td> <td> GLIPR1 </td> <td> 11010 </td> <td> NM_006851 </td> <td> 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 37.45 </td> <td> 197.58 </td> <td> 2.86 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202104_s_at </td> <td> 202104_s_at </td> <td> NM_003119 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003119.1 /DEF=Homo sapiens spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive) (SPG7), mRNA.  /FEA=mRNA /GEN=SPG7 /PROD=paraplegin /DB_XREF=gi:4507172 /UG=Hs.296847 spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive) /FL=gb:NM_003119.1 </td> <td> NM_003119 </td> <td> uncharacterized LOC101930112 /// spastic paraplegia 7 (pure and complicated autosomal recessive) </td> <td> LOC101930112 /// SPG7 </td> <td> 6687 /// 101930112 </td> <td> NM_003119 /// NM_199367 /// XM_005256321 /// XM_006721264 /// XM_006721265 /// XM_006721266 /// XR_253599 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008089 // anterograde axon cargo transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // non-traceable author statement /// 0030163 // protein catabolic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // traceable author statement /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement </td> <td> -47.50 </td> <td> 128.25 </td> <td> -2.86 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 210691_s_at </td> <td> 210691_s_at </td> <td> AF275803 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF275803.1 /DEF=Homo sapiens PNAS-107 mRNA, complete cds. /FEA=mRNA /PROD=PNAS-107 /DB_XREF=gi:10834769 /UG=Hs.27258 calcyclin binding protein /FL=gb:AF275803.1 </td> <td> AF275803 </td> <td> calcyclin binding protein </td> <td> CACYBP </td> <td> 27101 </td> <td> NM_001007214 /// NM_014412 /// XM_005245092 </td> <td> 0007507 // heart development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060416 // response to growth hormone // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005641 // nuclear envelope lumen // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0030877 // beta-catenin destruction complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> 41.38 </td> <td> 75.56 </td> <td> 2.86 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201518_at </td> <td> 201518_at </td> <td> NM_006807 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006807.1 /DEF=Homo sapiens chromobox homolog 1 (Drosophila HP1 beta) (CBX1), mRNA.  /FEA=mRNA /GEN=CBX1 /PROD=chromobox homolog 1 (Drosophila HP1 beta) /DB_XREF=gi:5803075 /UG=Hs.77254 chromobox homolog 1 (Drosophila HP1 beta) /FL=gb:U35451.1 gb:BC002609.1 gb:NM_006807.1 </td> <td> NM_006807 </td> <td> chromobox homolog 1 </td> <td> CBX1 </td> <td> 10951 </td> <td> NM_001127228 /// NM_006807 </td> <td> 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from direct assay /// 0000785 // chromatin // inferred from direct assay /// 0001939 // female pronucleus // inferred from electronic annotation /// 0001940 // male pronucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005720 // nuclear heterochromatin // traceable author statement /// 0005721 // centromeric heterochromatin // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0010369 // chromocenter // inferred from electronic annotation </td> <td> 0003682 // chromatin binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 1990226 // histone methyltransferase binding // inferred from physical interaction </td> <td> 52.30 </td> <td> 305.60 </td> <td> 2.86 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201993_x_at </td> <td> 201993_x_at </td> <td> NM_005463 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005463.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein D-like (HNRPDL), mRNA.  /FEA=mRNA /GEN=HNRPDL /PROD=heterogeneous nuclear ribonucleoprotein D-like /DB_XREF=gi:4885422 /UG=Hs.170311 heterogeneous nuclear ribonucleoprotein D-like /FL=gb:AB017019.1 gb:NM_005463.1 </td> <td> NM_005463 </td> <td> heterogeneous nuclear ribonucleoprotein D-like </td> <td> HNRNPDL </td> <td> 9987 </td> <td> NM_001207000 /// NM_005463 /// NM_031372 /// NR_003249 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006396 // RNA processing // non-traceable author statement /// 0010468 // regulation of gene expression // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0008143 // poly(A) binding // inferred from direct assay /// 0034046 // poly(G) binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -90.05 </td> <td> 509.35 </td> <td> -2.85 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208705_s_at </td> <td> 208705_s_at </td> <td> BG481972 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG481972 /FEA=EST /DB_XREF=gi:13414251 /DB_XREF=est:602526894F1 /CLONE=IMAGE:4650406 /UG=Hs.286236 eukaryotic translation initiation factor 5 /FL=gb:AL080102.1 </td> <td> BG481972 </td> <td> eukaryotic translation initiation factor 5 </td> <td> EIF5 </td> <td> 1983 </td> <td> NM_001969 /// NM_183004 </td> <td> 0006184 // GTP catabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // non-traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // non-traceable author statement /// 0003924 // GTPase activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 86.75 </td> <td> 752.67 </td> <td> 2.85 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212773_s_at </td> <td> 212773_s_at </td> <td> BG165094 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG165094 /FEA=EST /DB_XREF=gi:12671797 /DB_XREF=est:602343902F1 /CLONE=IMAGE:4453945 /UG=Hs.75187 translocase of outer mitochondrial membrane 20 (yeast) homolog </td> <td> BG165094 </td> <td> translocase of outer mitochondrial membrane 20 homolog (yeast) </td> <td> TOMM20 </td> <td> 9804 </td> <td> NM_014765 </td> <td> 0006605 // protein targeting // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from direct assay /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071806 // protein transmembrane transport // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // non-traceable author statement /// 0005742 // mitochondrial outer membrane translocase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from direct assay </td> <td> -98.22 </td> <td> 357.54 </td> <td> -2.85 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200868_s_at </td> <td> 200868_s_at </td> <td> NM_018683 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018683.1 /DEF=Homo sapiens zinc finger protein 313 (ZNF313), mRNA. /FEA=mRNA /GEN=ZNF313 /PROD=zinc finger protein 313 /DB_XREF=gi:8923897 /UG=Hs.10590 zinc finger protein 313 /FL=gb:AF265215.1 gb:NM_018683.1 </td> <td> NM_018683 </td> <td> ring finger protein 114 </td> <td> RNF114 </td> <td> 55905 </td> <td> NM_018683 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -45.33 </td> <td> 164.21 </td> <td> -2.85 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201857_at </td> <td> 201857_at </td> <td> NM_016107 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016107.1 /DEF=Homo sapiens M-phase phosphoprotein homolog (LOC51663), mRNA. /FEA=mRNA /GEN=LOC51663 /PROD=M-phase phosphoprotein homolog /DB_XREF=gi:7706372 /UG=Hs.173518 M-phase phosphoprotein homolog /FL=gb:BC000376.1 gb:BC000746.1 gb:AF100742.1 gb:NM_016107.1 </td> <td> NM_016107 </td> <td> zinc finger RNA binding protein </td> <td> ZFR </td> <td> 51663 </td> <td> NM_016107 /// XM_006714477 /// XR_427659 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -84.75 </td> <td> 463.25 </td> <td> -2.85 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201395_at </td> <td> 201395_at </td> <td> NM_005778 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005778.1 /DEF=Homo sapiens RNA binding motif protein 5 (RBM5), mRNA. /FEA=mRNA /GEN=RBM5 /PROD=RNA binding motif protein 5 /DB_XREF=gi:5032030 /UG=Hs.201675 RNA binding motif protein 5 /FL=gb:U23946.1 gb:BC002957.1 gb:AF091263.1 gb:NM_005778.1 </td> <td> NM_005778 </td> <td> RNA binding motif protein 5 </td> <td> RBM5 </td> <td> 10181 </td> <td> NM_005778 /// NR_036627 /// XM_006712917 /// XM_006712918 /// XM_006712919 /// XM_006712920 /// XR_427245 </td> <td> 0000245 // spliceosomal complex assembly // inferred from direct assay /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -94.75 </td> <td> 337.38 </td> <td> -2.85 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202224_at </td> <td> 202224_at </td> <td> BF304695 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF304695 /FEA=EST /DB_XREF=gi:11251580 /DB_XREF=est:601888248F1 /CLONE=IMAGE:4122466 /UG=Hs.306088 v-crk avian sarcoma virus CT10 oncogene homolog /FL=gb:D10656.1 gb:NM_016823.1 </td> <td> BF304695 </td> <td> v-crk avian sarcoma virus CT10 oncogene homolog </td> <td> CRK </td> <td> 1398 </td> <td> NM_005206 /// NM_016823 </td> <td> 0000186 // activation of MAPKK activity // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from direct assay /// 0032956 // regulation of actin cytoskeleton organization // inferred from direct assay /// 0035020 // regulation of Rac protein signal transduction // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred by curator /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from physical interaction /// 0045309 // protein phosphorylated amino acid binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction </td> <td> 46.27 </td> <td> 179.96 </td> <td> 2.85 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 213398_s_at </td> <td> 213398_s_at </td> <td> AI347090 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI347090 /FEA=EST /DB_XREF=gi:4084296 /DB_XREF=est:qp60d11.x1 /CLONE=IMAGE:1927413 /UG=Hs.7911 KIAA0323 protein </td> <td> AI347090 </td> <td> short chain dehydrogenase/reductase family 39U, member 1 </td> <td> SDR39U1 </td> <td> 56948 </td> <td> NM_001290292 /// NM_001290293 /// NM_020195 /// XM_005267873 /// XM_006720207 </td> <td> 0044237 // cellular metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from electronic annotation </td> <td> 30.42 </td> <td> 91.79 </td> <td> 2.85 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 204853_at </td> <td> 204853_at </td> <td> NM_006190 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006190.1 /DEF=Homo sapiens origin recognition complex, subunit 2 (yeast homolog)-like (ORC2L), mRNA.  /FEA=mRNA /GEN=ORC2L /PROD=origin recognition complex, subunit 2 (yeasthomolog)-like /DB_XREF=gi:5453829 /UG=Hs.41694 origin recognition complex, subunit 2 (yeast homolog)-like /FL=gb:U27459.1 gb:U40268.2 gb:NM_006190.1 </td> <td> NM_006190 </td> <td> origin recognition complex, subunit 2 </td> <td> ORC2 </td> <td> 4999 </td> <td> NM_006190 /// NR_033915 /// XM_006712555 /// XR_427088 /// XR_427089 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006270 // DNA replication initiation // traceable author statement </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0000808 // origin recognition complex // inferred from direct assay /// 0000939 // condensed chromosome inner kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0003688 // DNA replication origin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 39.37 </td> <td> 64.59 </td> <td> 2.85 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201237_at </td> <td> 201237_at </td> <td> AV685920 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV685920 /FEA=EST /DB_XREF=gi:10287783 /DB_XREF=est:AV685920 /CLONE=GKCEGD05 /UG=Hs.75546 capping protein (actin filament) muscle Z-line, alpha 2 /FL=gb:BC005338.1 gb:NM_006136.1 gb:U03269.1 </td> <td> AV685920 </td> <td> capping protein (actin filament) muscle Z-line, alpha 2 </td> <td> CAPZA2 </td> <td> 830 </td> <td> NM_006136 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008290 // F-actin capping protein complex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071203 // WASH complex // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 54.77 </td> <td> 284.24 </td> <td> 2.84 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 218356_at </td> <td> 218356_at </td> <td> NM_013393 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013393.1 /DEF=Homo sapiens cell division protein FtsJ (FJH1), mRNA. /FEA=mRNA /GEN=FJH1 /PROD=cell division protein FtsJ /DB_XREF=gi:7019376 /UG=Hs.279877 cell division protein FtsJ /FL=gb:AF093415.1 gb:NM_013393.1 </td> <td> NM_013393 </td> <td> FtsJ RNA methyltransferase homolog 2 (E. coli) </td> <td> FTSJ2 </td> <td> 29960 </td> <td> NM_013393 /// NM_177442 </td> <td> 0001510 // RNA methylation // inferred from electronic annotation /// 0006364 // rRNA processing // non-traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0031167 // rRNA methylation // non-traceable author statement /// 0032259 // methylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity </td> <td> 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008650 // rRNA (uridine-2'-O-)-methyltransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 31.60 </td> <td> 76.25 </td> <td> 2.84 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212675_s_at </td> <td> 212675_s_at </td> <td> AB011154 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB011154.1 /DEF=Homo sapiens mRNA for KIAA0582 protein, partial cds. /FEA=mRNA /GEN=KIAA0582 /PROD=KIAA0582 protein /DB_XREF=gi:3043687 /UG=Hs.79507 KIAA0582 protein </td> <td> AB011154 </td> <td> centrosomal protein 68kDa </td> <td> CEP68 </td> <td> 23177 </td> <td> NM_015147 /// XM_005264218 /// XM_005264219 </td> <td> 0010457 // centriole-centriole cohesion // inferred from mutant phenotype /// 0033365 // protein localization to organelle // inferred from mutant phenotype /// 0051297 // centrosome organization // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0019901 // protein kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction </td> <td> 30.82 </td> <td> 63.66 </td> <td> 2.84 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 210276_s_at </td> <td> 210276_s_at </td> <td> AF281030 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF281030.1 /DEF=Homo sapiens Tara mRNA, complete cds. /FEA=mRNA /PROD=Tara /DB_XREF=gi:12006357 /UG=Hs.40342 putative nuclear protein /FL=gb:AF281030.1 gb:BC003618.1 </td> <td> AF281030 </td> <td> nucleolar protein 12 /// TRIO and F-actin binding protein </td> <td> NOL12 /// TRIOBP </td> <td> 11078 /// 79159 </td> <td> NM_001039141 /// NM_007032 /// NM_024313 /// NM_138632 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0030047 // actin modification // non-traceable author statement /// 0051016 // barbed-end actin filament capping // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // non-traceable author statement /// 0030496 // midbody // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017049 // GTP-Rho binding // non-traceable author statement /// 0019843 // rRNA binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0045159 // myosin II binding // non-traceable author statement /// 0051015 // actin filament binding // inferred from direct assay </td> <td> 58.55 </td> <td> 148.00 </td> <td> 2.84 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212572_at </td> <td> 212572_at </td> <td> AW779556 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW779556 /FEA=EST /DB_XREF=gi:7794159 /DB_XREF=est:hn81f05.x1 /CLONE=IMAGE:3034305 /UG=Hs.184523 KIAA0965 protein </td> <td> AW779556 </td> <td> serine/threonine kinase 38 like </td> <td> STK38L </td> <td> 23012 </td> <td> NM_015000 /// XM_005253342 /// XM_005253343 /// XM_006719058 /// XM_006719059 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0051128 // regulation of cellular component organization // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 65.20 </td> <td> 180.12 </td> <td> 2.84 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 203839_s_at </td> <td> 203839_s_at </td> <td> NM_005781 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005781.2 /DEF=Homo sapiens activated p21cdc42Hs kinase (ACK1), mRNA. /FEA=mRNA /GEN=ACK1 /PROD=activated p21cdc42Hs kinase /DB_XREF=gi:8922074 /UG=Hs.153937 activated p21cdc42Hs kinase /FL=gb:L13738.2 gb:NM_005781.2 </td> <td> NM_005781 </td> <td> tyrosine kinase, non-receptor, 2 </td> <td> TNK2 </td> <td> 10188 </td> <td> NM_001010938 /// NM_005781 /// XM_005269268 /// XM_005269269 /// XM_005269270 /// XM_005269271 /// XM_005269272 /// XM_005269273 /// XM_005269274 /// XM_005269275 /// XM_006713460 /// XM_006713461 /// XM_006713462 /// XM_006713463 /// XM_006713464 /// XM_006713465 /// XM_006713466 /// XM_006713467 /// XM_006713468 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 2000369 // regulation of clathrin-mediated endocytosis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070436 // Grb2-EGFR complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005095 // GTPase inhibitor activity // traceable author statement /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050699 // WW domain binding // inferred from sequence or structural similarity </td> <td> 39.45 </td> <td> 51.33 </td> <td> 2.84 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200055_at </td> <td> 200055_at </td> <td> NM_006284 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006284.1 /DEF=Homo sapiens TATA box binding protein (TBP)-associated factor, RNA polymerase II, H, 30kD (TAF2H), mRNA.  /FEA=mRNA /GEN=TAF2H /PROD=TATA box binding protein (TBP)-associatedfactor, RNA polymerase II, H, 30kD /DB_XREF=gi:5454105 /UG=Hs.89657 TATA box binding protein (TBP)-associated factor, RNA polymerase II, H, 30kD /FL=gb:NM_006284.1 gb:U13991.1 </td> <td> NM_006284 </td> <td> TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa </td> <td> TAF10 </td> <td> 6881 </td> <td> NM_006284 </td> <td> 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006352 // DNA-templated transcription, initiation // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred by curator /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred by curator /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016578 // histone deubiquitination // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from direct assay </td> <td> 0000125 // PCAF complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0030914 // STAGA complex // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0070063 // RNA polymerase binding // inferred from direct assay </td> <td> 107.15 </td> <td> 381.88 </td> <td> 2.84 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 207266_x_at </td> <td> 207266_x_at </td> <td> NM_016837 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016837.1 /DEF=Homo sapiens RNA binding motif, single stranded interacting protein 1 (RBMS1), transcript variant MSSP-3, mRNA.  /FEA=mRNA /GEN=RBMS1 /PROD=RNA binding motif, single stranded interactingprotein 1, isoform e /DB_XREF=gi:8400719 /UG=Hs.241567 RNA binding motif, single stranded interacting protein 1 /FL=gb:NM_016837.1 </td> <td> NM_016837 </td> <td> RNA binding motif, single stranded interacting protein 1 </td> <td> RBMS1 </td> <td> 5937 </td> <td> NM_002897 /// NM_016836 /// NM_016839 /// XM_005246737 /// XM_005246738 /// XM_005246739 /// XM_005246740 /// XM_005246741 /// XM_006712671 /// XM_006712672 /// XM_006712673 /// XM_006712674 /// XM_006712675 </td> <td> 0006260 // DNA replication // non-traceable author statement /// 0006396 // RNA processing // traceable author statement </td> <td> 0005634 // nucleus // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // non-traceable author statement /// 0003697 // single-stranded DNA binding // non-traceable author statement /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 77.58 </td> <td> 428.59 </td> <td> 2.84 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 219557_s_at </td> <td> 219557_s_at </td> <td> NM_020645 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020645.1 /DEF=Homo sapiens chromosome 11 open reading frame 14 (C11ORF14), mRNA. /FEA=mRNA /GEN=C11ORF14 /PROD=chromosome 11 open reading frame 14 /DB_XREF=gi:11034818 /UG=Hs.32017 chromosome 11 open reading frame 14 /FL=gb:NM_020645.1 </td> <td> NM_020645 </td> <td> nuclear receptor interacting protein 3 </td> <td> NRIP3 </td> <td> 56675 </td> <td> NM_020645 </td> <td> 0006508 // proteolysis // inferred from electronic annotation </td> <td>  </td> <td> 0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation </td> <td> 36.80 </td> <td> 111.17 </td> <td> 2.84 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 218542_at </td> <td> 218542_at </td> <td> NM_018131 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018131.1 /DEF=Homo sapiens hypothetical protein FLJ10540 (FLJ10540), mRNA. /FEA=mRNA /GEN=FLJ10540 /PROD=hypothetical protein FLJ10540 /DB_XREF=gi:8922501 /UG=Hs.14559 hypothetical protein FLJ10540 /FL=gb:NM_018131.1 </td> <td> NM_018131 </td> <td> centrosomal protein 55kDa </td> <td> CEP55 </td> <td> 55165 </td> <td> NM_001127182 /// NM_018131 /// XM_006717909 </td> <td> 0000281 // mitotic cytokinesis // inferred from genetic interaction /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0045171 // intercellular bridge // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 65.28 </td> <td> 169.66 </td> <td> 2.83 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 211487_x_at </td> <td> 211487_x_at </td> <td> BC004886 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004886.1 /DEF=Homo sapiens, ribosomal protein S17, clone MGC:11144, mRNA, complete cds.  /FEA=mRNA /PROD=ribosomal protein S17 /DB_XREF=gi:13436139 /UG=Hs.5174 ribosomal protein S17 /FL=gb:BC004886.1 </td> <td> BC004886 </td> <td> ribosomal protein S17 </td> <td> RPS17 </td> <td> 6218 </td> <td> NM_001021 /// NM_001199057 /// NR_111943 /// NR_111944 </td> <td> 0000028 // ribosomal small subunit assembly // not recorded /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // non-traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // not recorded /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0034101 // erythrocyte homeostasis // inferred from mutant phenotype /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // not recorded /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -893.18 </td> <td> 3700.96 </td> <td> -2.83 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208680_at </td> <td> 208680_at </td> <td> L19184 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L19184.1 /DEF=Human natural killer cell enhancing factor (NKEFA) mRNA, complete cds.  /FEA=mRNA /GEN=NKEFA /PROD=enhancer protein /DB_XREF=gi:440305 /UG=Hs.180909 peroxiredoxin 1 /FL=gb:L19184.1 gb:NM_002574.1 </td> <td> L19184 </td> <td> peroxiredoxin 1 </td> <td> PRDX1 </td> <td> 5052 </td> <td> NM_001202431 /// NM_002574 /// NM_181696 /// NM_181697 </td> <td> 0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0001501 // skeletal system development // traceable author statement /// 0001895 // retina homeostasis // inferred from expression pattern /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0019430 // removal of superoxide radicals // inferred from electronic annotation /// 0032872 // regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0034101 // erythrocyte homeostasis // inferred from electronic annotation /// 0042267 // natural killer cell mediated cytotoxicity // inferred from electronic annotation /// 0042345 // regulation of NF-kappaB import into nucleus // inferred from electronic annotation /// 0042744 // hydrogen peroxide catabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005719 // nuclear euchromatin // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005782 // peroxisomal matrix // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004601 // peroxidase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008379 // thioredoxin peroxidase activity // inferred from direct assay /// 0016209 // antioxidant activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051920 // peroxiredoxin activity // inferred from electronic annotation </td> <td> 316.70 </td> <td> 2226.62 </td> <td> 2.83 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201013_s_at </td> <td> 201013_s_at </td> <td> AA902652 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA902652 /FEA=EST /DB_XREF=gi:3037775 /DB_XREF=est:ok71a12.s1 /CLONE=IMAGE:1519390 /UG=Hs.117950 multifunctional polypeptide similar to SAICAR synthetase and AIR carboxylase /FL=gb:NM_006452.1 </td> <td> AA902652 </td> <td> phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase </td> <td> PAICS </td> <td> 10606 </td> <td> NM_001079524 /// NM_001079525 /// NM_006452 /// XM_006714035 </td> <td> 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006189 // 'de novo' IMP biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009113 // purine nucleobase biosynthetic process // traceable author statement /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004638 // phosphoribosylaminoimidazole carboxylase activity // traceable author statement /// 0004639 // phosphoribosylaminoimidazolesuccinocarboxamide synthase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0034023 // 5-(carboxyamino)imidazole ribonucleotide mutase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 126.50 </td> <td> 380.02 </td> <td> 2.83 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208782_at </td> <td> 208782_at </td> <td> BC000055 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000055.1 /DEF=Homo sapiens, follistatin-like 1, clone MGC:1993, mRNA, complete cds.  /FEA=mRNA /PROD=follistatin-like 1 /DB_XREF=gi:12652618 /UG=Hs.296267 follistatin-like 1 /FL=gb:BC000055.1 gb:U06863.1 </td> <td> BC000055 </td> <td> follistatin-like 1 </td> <td> FSTL1 </td> <td> 11167 </td> <td> NM_007085 </td> <td> 0030509 // BMP signaling pathway // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation </td> <td> -216.70 </td> <td> 1077.70 </td> <td> -2.83 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 218650_at </td> <td> 218650_at </td> <td> NM_022775 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022775.1 /DEF=Homo sapiens hypothetical protein FLJ22127 (FLJ22127), mRNA. /FEA=mRNA /GEN=FLJ22127 /PROD=hypothetical protein FLJ22127 /DB_XREF=gi:12232458 /UG=Hs.59457 hypothetical protein FLJ22127 /FL=gb:NM_022775.1 </td> <td> NM_022775 </td> <td> DGCR8 microprocessor complex subunit /// microRNA 1306 </td> <td> DGCR8 /// MIR1306 </td> <td> 54487 /// 100302197 </td> <td> NM_001190326 /// NM_022720 /// NR_031706 /// XM_006724268 </td> <td> 0010467 // gene expression // traceable author statement /// 0031053 // primary miRNA processing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 34.75 </td> <td> 76.72 </td> <td> 2.83 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 211997_x_at </td> <td> 211997_x_at </td> <td> NM_005324 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_005324.1 /DEF=Homo sapiens H3 histone, family 3B (H3.3B) (H3F3B), mRNA. /FEA=CDS /GEN=H3F3B /PROD=H3 histone, family 3B (H3.3B) /DB_XREF=gi:4885384 /UG=Hs.180877 H3 histone, family 3B (H3.3B) /FL=gb:NM_005324.1 </td> <td> NM_005324 </td> <td> H3 histone, family 3A /// H3 histone, family 3B (H3.3B) /// microRNA 4738 </td> <td> H3F3A /// H3F3B /// MIR4738 </td> <td> 3020 /// 3021 /// 100616282 </td> <td> NM_002107 /// NM_005324 /// NR_039892 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype </td> <td> 0000228 // nuclear chromosome // inferred from direct assay /// 0000786 // nucleosome // inferred from electronic annotation /// 0000788 // nuclear nucleosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -644.38 </td> <td> 2226.29 </td> <td> -2.83 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 217872_at </td> <td> 217872_at </td> <td> NM_017916 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017916.1 /DEF=Homo sapiens hypothetical protein FLJ20643 (FLJ20643), mRNA. /FEA=mRNA /GEN=FLJ20643 /PROD=hypothetical protein FLJ20643 /DB_XREF=gi:8923597 /UG=Hs.5245 hypothetical protein FLJ20643 /FL=gb:BC001108.1 gb:NM_017916.1 </td> <td> NM_017916 </td> <td> PIH1 domain containing 1 </td> <td> PIH1D1 </td> <td> 55011 </td> <td> NM_017916 /// XM_006723254 /// XR_243941 /// XR_430202 /// XR_430203 </td> <td> 0000492 // box C/D snoRNP assembly // inferred from mutant phenotype /// 0030855 // epithelial cell differentiation // inferred from expression pattern </td> <td> 0070761 // pre-snoRNP complex // inferred from direct assay </td> <td>  </td> <td> -47.73 </td> <td> 224.31 </td> <td> -2.83 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212967_x_at </td> <td> 212967_x_at </td> <td> AW148801 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW148801 /FEA=EST /DB_XREF=gi:6196697 /DB_XREF=est:xf04e10.x1 /CLONE=IMAGE:2617098 /UG=Hs.179662 nucleosome assembly protein 1-like 1 </td> <td> AW148801 </td> <td> nucleosome assembly protein 1-like 1 </td> <td> NAP1L1 </td> <td> 4673 </td> <td> NM_004537 /// NM_139207 /// XM_005268895 /// XM_005268896 /// XM_006719422 /// XM_006719423 /// XM_006719424 /// XM_006719425 /// XR_245930 /// XR_245931 /// XR_245932 </td> <td> 0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -204.12 </td> <td> 1469.64 </td> <td> -2.83 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212383_at </td> <td> 212383_at </td> <td> AL096733 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL096733.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434E071 (from clone DKFZp434E071). /FEA=mRNA /DB_XREF=gi:5419866 /UG=Hs.267871 ATPase, H+ transporting, lysosomal (vacuolar proton pump) non-catalytic accessory protein 1A (110116kD) </td> <td> AL096733 </td> <td> ATPase, H+ transporting, lysosomal V0 subunit a1 </td> <td> ATP6V0A1 </td> <td> 535 </td> <td> NM_001130020 /// NM_001130021 /// NM_005177 /// XM_005257459 /// XM_005257461 /// XM_005257463 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0000220 // vacuolar proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction </td> <td> 44.02 </td> <td> 119.29 </td> <td> 2.83 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212274_at </td> <td> 212274_at </td> <td> AV705559 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV705559 /FEA=EST /DB_XREF=gi:10722858 /DB_XREF=est:AV705559 /CLONE=ADBAPE04 /UG=Hs.81412 lipin 1 </td> <td> AV705559 </td> <td> lipin 1 </td> <td> LPIN1 </td> <td> 23175 </td> <td> NM_001261427 /// NM_001261428 /// NM_001261429 /// NM_145693 /// XM_006711869 /// XM_006711870 /// XM_006711871 /// XM_006711872 /// XM_006711873 /// XM_006711874 /// XM_006711875 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000266 // mitochondrial fission // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006642 // triglyceride mobilization // inferred from sequence or structural similarity /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006646 // phosphatidylethanolamine biosynthetic process // traceable author statement /// 0006656 // phosphatidylcholine biosynthetic process // traceable author statement /// 0009062 // fatty acid catabolic process // inferred from sequence or structural similarity /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0031065 // positive regulation of histone deacetylation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031529 // ruffle organization // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045598 // regulation of fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from sequence or structural similarity </td> <td> 0001085 // RNA polymerase II transcription factor binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008195 // phosphatidate phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0042975 // peroxisome proliferator activated receptor binding // inferred from electronic annotation </td> <td> 39.43 </td> <td> 146.66 </td> <td> 2.83 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 204405_x_at </td> <td> 204405_x_at </td> <td> NM_014473 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014473.1 /DEF=Homo sapiens putative dimethyladenosine transferase (HSA9761), mRNA.  /FEA=mRNA /GEN=HSA9761 /PROD=putative dimethyladenosine transferase /DB_XREF=gi:7657197 /UG=Hs.125819 putative dimethyladenosine transferase /FL=gb:AF102147.1 gb:NM_014473.1 </td> <td> NM_014473 </td> <td> DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae) </td> <td> DIMT1 </td> <td> 27292 </td> <td> NM_014473 </td> <td> 0000154 // rRNA modification // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0031167 // rRNA methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000179 // rRNA (adenine-N6,N6-)-dimethyltransferase activity // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008649 // rRNA methyltransferase activity // inferred from electronic annotation /// 0016433 // rRNA (adenine) methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0052909 // 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity // inferred from electronic annotation </td> <td> 85.88 </td> <td> 265.44 </td> <td> 2.82 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200000_s_at </td> <td> 200000_s_at </td> <td> NM_006445 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006445.1 /DEF=Homo sapiens U5 snRNP-specific protein (220 kD), ortholog of S. cerevisiae Prp8p (PRP8), mRNA.  /FEA=mRNA /GEN=PRP8 /PROD=U5 snRNP-specific protein (220 kD), ortholog ofS. cerevisiae Prp8p /DB_XREF=gi:5453983 /UG=Hs.181368 U5 snRNP-specific protein (220 kD), ortholog of S. cerevisiae Prp8p /FL=gb:AB007510.1 gb:AF092565.1 gb:NM_006445.1 </td> <td> NM_006445 </td> <td> pre-mRNA processing factor 8 </td> <td> PRPF8 </td> <td> 10594 </td> <td> NM_006445 </td> <td> 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005682 // U5 snRNP // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017070 // U6 snRNA binding // inferred from electronic annotation /// 0030623 // U5 snRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 84.17 </td> <td> 357.46 </td> <td> 2.82 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202054_s_at </td> <td> 202054_s_at </td> <td> NM_000382 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000382.1 /DEF=Homo sapiens aldehyde dehydrogenase 3 family, member A2 (ALDH3A2), mRNA.  /FEA=mRNA /GEN=ALDH3A2 /PROD=aldehyde dehydrogenase 3A2 /DB_XREF=gi:4557302 /UG=Hs.159608 aldehyde dehydrogenase 3 family, member A2 /FL=gb:L47162.1 gb:U46689.1 gb:NM_000382.1 </td> <td> NM_000382 </td> <td> aldehyde dehydrogenase 3 family, member A2 </td> <td> ALDH3A2 </td> <td> 224 </td> <td> NM_000382 /// NM_001031806 </td> <td> 0006081 // cellular aldehyde metabolic process // inferred from direct assay /// 0006081 // cellular aldehyde metabolic process // non-traceable author statement /// 0006714 // sesquiterpenoid metabolic process // inferred from direct assay /// 0007417 // central nervous system development // inferred from mutant phenotype /// 0007422 // peripheral nervous system development // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008218 // bioluminescence // inferred from electronic annotation /// 0008544 // epidermis development // inferred from mutant phenotype /// 0033306 // phytol metabolic process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from direct assay /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from mutant phenotype /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0046577 // long-chain-alcohol oxidase activity // inferred from direct assay /// 0050061 // long-chain-aldehyde dehydrogenase activity // inferred from direct assay /// 0052814 // medium-chain-aldehyde dehydrogenase activity // inferred from direct assay </td> <td> 33.42 </td> <td> 28.46 </td> <td> 2.82 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 214507_s_at </td> <td> 214507_s_at </td> <td> NM_014285 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_014285.1 /DEF=Homo sapiens homolog of Yeast RRP4 (ribosomal RNA processing 4), 3-5-exoribonuclease (RRP4), mRNA.  /FEA=CDS /GEN=RRP4 /PROD=homolog of Yeast RRP4 (ribosomal RNA processing4), 3-5-exoribonuclease /DB_XREF=gi:7657527 /UG=Hs.211973 homolog of Yeast RRP4 (ribosomal RNA processing 4), 3-5-exoribonuclease /FL=gb:NM_014285.1 </td> <td> NM_014285 </td> <td> exosome component 2 </td> <td> EXOSC2 </td> <td> 23404 </td> <td> NM_001282708 /// NM_001282709 /// NM_014285 /// NR_104230 /// XM_005272176 /// XM_006717020 /// XM_006717021 /// XM_006717022 /// XM_006717023 /// XM_006717024 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090503 // RNA phosphodiester bond hydrolysis, exonucleolytic // traceable author statement </td> <td> 0000178 // exosome (RNase complex) // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation </td> <td> 0000175 // 3'-5'-exoribonuclease activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004532 // exoribonuclease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008312 // 7S RNA binding // traceable author statement </td> <td> 31.30 </td> <td> 38.80 </td> <td> 2.82 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 218009_s_at </td> <td> 218009_s_at </td> <td> NM_003981 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003981.1 /DEF=Homo sapiens protein regulator of cytokinesis 1 (PRC1), mRNA. /FEA=mRNA /GEN=PRC1 /PROD=protein regulator of cytokinesis 1 /DB_XREF=gi:4506038 /UG=Hs.5101 protein regulator of cytokinesis 1 /FL=gb:BC003138.1 gb:AF044588.1 gb:NM_003981.1 </td> <td> NM_003981 </td> <td> protein regulator of cytokinesis 1 </td> <td> PRC1 </td> <td> 9055 </td> <td> NM_001267580 /// NM_003981 /// NM_199413 /// NM_199414 /// XM_005254986 /// XM_005254987 /// XM_006720759 /// XM_006720760 </td> <td> 0000022 // mitotic spindle elongation // traceable author statement /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000910 // cytokinesis // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005876 // spindle microtubule // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 60.15 </td> <td> 255.97 </td> <td> 2.82 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202115_s_at </td> <td> 202115_s_at </td> <td> NM_015658 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015658.1 /DEF=Homo sapiens DKFZP564C186 protein (DKFZP564C186), mRNA. /FEA=mRNA /GEN=DKFZP564C186 /PROD=DKFZP564C186 protein /DB_XREF=gi:7661605 /UG=Hs.134200 DKFZP564C186 protein /FL=gb:BC003555.1 gb:NM_015658.1 </td> <td> NM_015658 </td> <td> nucleolar complex associated 2 homolog (S. cerevisiae) </td> <td> NOC2L </td> <td> 26155 </td> <td> NM_015658 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002903 // negative regulation of B cell apoptotic process // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0031497 // chromatin assembly // inferred from direct assay /// 0032066 // nucleolus to nucleoplasm transport // inferred from direct assay /// 0034644 // cellular response to UV // inferred from direct assay /// 0035067 // negative regulation of histone acetylation // inferred from direct assay /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031491 // nucleosome binding // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070491 // repressing transcription factor binding // inferred from direct assay </td> <td> 29.30 </td> <td> 106.90 </td> <td> 2.81 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212403_at </td> <td> 212403_at </td> <td> AI749193 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI749193 /FEA=EST /DB_XREF=gi:5127457 /DB_XREF=est:at40e04.x1 /CLONE=IMAGE:2374494 /UG=Hs.17639 Homo sapiens ubiquitin protein ligase (UBE3B) mRNA, partial cds </td> <td> AI749193 </td> <td> ubiquitin protein ligase E3B </td> <td> UBE3B </td> <td> 89910 </td> <td> NM_001270449 /// NM_001270450 /// NM_001270451 /// NM_130466 /// NM_183414 /// NM_183415 /// XM_005253987 /// XM_006719681 /// XM_006719682 /// XR_429118 /// XR_429119 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded </td> <td> 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded </td> <td> 0004842 // ubiquitin-protein transferase activity // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> 35.40 </td> <td> 104.88 </td> <td> 2.81 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201273_s_at </td> <td> 201273_s_at </td> <td> NM_003133 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003133.1 /DEF=Homo sapiens signal recognition particle 9kD (SRP9), mRNA. /FEA=mRNA /GEN=SRP9 /PROD=signal recognition particle 9kD /DB_XREF=gi:4507216 /UG=Hs.75975 signal recognition particle 9kD /FL=gb:NM_003133.1 gb:U20998.1 </td> <td> NM_003133 </td> <td> signal recognition particle 9kDa </td> <td> SRP9 </td> <td> 6726 </td> <td> NM_001130440 /// NM_003133 </td> <td> 0006412 // translation // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045900 // negative regulation of translational elongation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005785 // signal recognition particle receptor complex // traceable author statement /// 0005786 // signal recognition particle, endoplasmic reticulum targeting // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0048500 // signal recognition particle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0005047 // signal recognition particle binding // traceable author statement /// 0008312 // 7S RNA binding // inferred from electronic annotation </td> <td> 207.50 </td> <td> 969.92 </td> <td> 2.81 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 219288_at </td> <td> 219288_at </td> <td> NM_020685 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020685.1 /DEF=Homo sapiens HT021 (HT021), mRNA. /FEA=mRNA /GEN=HT021 /PROD=HT021 /DB_XREF=gi:10190735 /UG=Hs.47166 HT021 /FL=gb:NM_020685.1 gb:AF236158.1 </td> <td> NM_020685 </td> <td> chromosome 3 open reading frame 14 </td> <td> C3orf14 </td> <td> 57415 </td> <td> NM_001291941 /// NM_001291942 /// NM_001291943 /// NM_020685 /// XM_005265338 /// XM_005265339 /// XM_005265340 </td> <td>  </td> <td>  </td> <td>  </td> <td> 34.37 </td> <td> 101.69 </td> <td> 2.81 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 219392_x_at </td> <td> 219392_x_at </td> <td> NM_018304 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018304.1 /DEF=Homo sapiens hypothetical protein FLJ11029 (FLJ11029), mRNA. /FEA=mRNA /GEN=FLJ11029 /PROD=hypothetical protein FLJ11029 /DB_XREF=gi:8922831 /UG=Hs.274448 hypothetical protein FLJ11029 /FL=gb:NM_018304.1 </td> <td> NM_018304 </td> <td> proline rich 11 </td> <td> PRR11 </td> <td> 55771 </td> <td> NM_018304 /// XR_243671 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td>  </td> <td> 66.48 </td> <td> 149.19 </td> <td> 2.81 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201429_s_at </td> <td> 201429_s_at </td> <td> NM_000998 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000998.1 /DEF=Homo sapiens ribosomal protein L37a (RPL37A), mRNA. /FEA=mRNA /GEN=RPL37A /PROD=ribosomal protein L37a /DB_XREF=gi:4506642 /UG=Hs.5566 ribosomal protein L37a /FL=gb:BC000555.1 gb:L06499.1 gb:NM_000998.1 </td> <td> NM_000998 </td> <td> ribosomal protein L37a </td> <td> RPL37A </td> <td> 6168 </td> <td> NM_000998 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -1136.15 </td> <td> 5087.57 </td> <td> -2.81 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 214658_at </td> <td> 214658_at </td> <td> BG286537 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG286537 /FEA=EST /DB_XREF=gi:13039504 /DB_XREF=est:602382536F1 /CLONE=IMAGE:4500129 /UG=Hs.278391 CGI-109 protein </td> <td> BG286537 </td> <td> transmembrane emp24 protein transport domain containing 7 /// TMED7-TICAM2 readthrough </td> <td> TMED7 /// TMED7-TICAM2 </td> <td> 51014 /// 100302736 </td> <td> NM_001164468 /// NM_001164469 /// NM_181836 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034144 // negative regulation of toll-like receptor 4 signaling pathway // inferred from direct assay /// 0034145 // positive regulation of toll-like receptor 4 signaling pathway // inferred from direct assay /// 0034145 // positive regulation of toll-like receptor 4 signaling pathway // inferred from mutant phenotype /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035669 // TRAM-dependent toll-like receptor 4 signaling pathway // inferred from direct assay /// 0035669 // TRAM-dependent toll-like receptor 4 signaling pathway // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 0071650 // negative regulation of chemokine (C-C motif) ligand 5 production // inferred from mutant phenotype /// 0071651 // positive regulation of chemokine (C-C motif) ligand 5 production // inferred from mutant phenotype /// 2000494 // positive regulation of interleukin-18-mediated signaling pathway // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030126 // COPI vesicle coat // traceable author statement /// 0030127 // COPII vesicle coat // traceable author statement /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype </td> <td> 58.20 </td> <td> 84.50 </td> <td> 2.81 </td> <td> 0.02 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200990_at </td> <td> 200990_at </td> <td> NM_005762 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005762.1 /DEF=Homo sapiens KRAB-associated protein 1 (TIF1B), mRNA. /FEA=mRNA /GEN=TIF1B /PROD=KRAB-associated protein 1 /DB_XREF=gi:5032178 /UG=Hs.228059 KRAB-associated protein 1 /FL=gb:BC004978.1 gb:U78773.1 gb:U95040.1 gb:NM_005762.1 </td> <td> NM_005762 </td> <td> tripartite motif containing 28 </td> <td> TRIM28 </td> <td> 10155 </td> <td> NM_005762 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0006281 // DNA repair // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from direct assay /// 0045087 // innate immune response // inferred from direct assay /// 0045739 // positive regulation of DNA repair // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from direct assay /// 0060028 // convergent extension involved in axis elongation // inferred from electronic annotation /// 0060669 // embryonic placenta morphogenesis // inferred from electronic annotation /// 1902187 // negative regulation of viral release from host cell // inferred from direct assay </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // traceable author statement /// 0005719 // nuclear euchromatin // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0035851 // Krueppel-associated box domain binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction </td> <td> 74.40 </td> <td> 487.45 </td> <td> 2.81 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200954_at </td> <td> 200954_at </td> <td> NM_001694 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001694.1 /DEF=Homo sapiens ATPase, H+ transporting, lysosomal (vacuolar proton pump) 16kD (ATP6L), mRNA.  /FEA=mRNA /GEN=ATP6L /PROD=ATPase, H+ transporting, lysosomal (vacuolarproton pump) 16kD /DB_XREF=gi:4502312 /UG=Hs.76159 ATPase, H+ transporting, lysosomal (vacuolar proton pump) 16kD /FL=gb:BC004537.1 gb:M62762.1 gb:NM_001694.1 </td> <td> NM_001694 </td> <td> ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c </td> <td> ATP6V0C </td> <td> 527 </td> <td> NM_001198569 /// NM_001694 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from mutant phenotype /// 0033572 // transferrin transport // traceable author statement /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005773 // vacuole // inferred from electronic annotation /// 0005774 // vacuolar membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // traceable author statement /// 0046961 // proton-transporting ATPase activity, rotational mechanism // traceable author statement </td> <td> 51.63 </td> <td> 186.11 </td> <td> 2.80 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 203481_at </td> <td> 203481_at </td> <td> AI655902 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI655902 /FEA=EST /DB_XREF=gi:4739881 /DB_XREF=est:tt41c06.x1 /CLONE=IMAGE:2243338 /UG=Hs.93581 hypothetical protein FLJ10512 /FL=gb:NM_018121.1 </td> <td> AI655902 </td> <td> family with sequence similarity 178, member A </td> <td> FAM178A </td> <td> 55719 </td> <td> NM_001136123 /// NM_001243770 /// NM_018121 /// NM_144592 /// XM_005269965 /// XM_006717913 </td> <td>  </td> <td> 0000785 // chromatin // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay </td> <td>  </td> <td> -31.03 </td> <td> 58.44 </td> <td> -2.80 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 206584_at </td> <td> 206584_at </td> <td> NM_015364 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015364.1 /DEF=Homo sapiens MD-2 protein (MD-2), mRNA. /FEA=mRNA /GEN=MD-2 /PROD=MD-2 protein /DB_XREF=gi:7662503 /UG=Hs.69328 MD-2 protein /FL=gb:AB018549.1 gb:NM_015364.1 gb:AF168121.1 </td> <td> NM_015364 </td> <td> lymphocyte antigen 96 </td> <td> LY96 </td> <td> 23643 </td> <td> NM_001195797 /// NM_015364 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0031666 // positive regulation of lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032497 // detection of lipopolysaccharide // inferred from direct assay /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0046696 // lipopolysaccharide receptor complex // inferred from direct assay </td> <td> 0001875 // lipopolysaccharide receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement </td> <td> 28.57 </td> <td> 98.86 </td> <td> 2.80 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 209835_x_at </td> <td> 209835_x_at </td> <td> BC004372 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004372.1 /DEF=Homo sapiens, Similar to CD44 antigen (homing function and Indian blood group system), clone MGC:10468, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to CD44 antigen (homing function andIndian blood group system) /DB_XREF=gi:13325117 /UG=Hs.169610 CD44 antigen (homing function and Indian blood group system) /FL=gb:BC004372.1 </td> <td> BC004372 </td> <td> CD44 molecule (Indian blood group) </td> <td> CD44 </td> <td> 960 </td> <td> NM_000610 /// NM_001001389 /// NM_001001390 /// NM_001001391 /// NM_001001392 /// NM_001202555 /// NM_001202556 /// NM_001202557 /// XM_005253231 /// XM_005253232 /// XM_005253233 /// XM_005253234 /// XM_005253235 /// XM_005253238 /// XM_005253239 /// XM_005253240 /// XM_006718388 /// XM_006718389 /// XM_006718390 </td> <td> 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0002246 // wound healing involved in inflammatory response // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030212 // hyaluronan metabolic process // traceable author statement /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0030214 // hyaluronan catabolic process // traceable author statement /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0051216 // cartilage development // inferred from expression pattern /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060442 // branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070487 // monocyte aggregation // inferred from mutant phenotype /// 1900625 // positive regulation of monocyte aggregation // inferred from mutant phenotype /// 1902166 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004415 // hyalurononglucosaminidase activity // inferred from direct assay /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0005540 // hyaluronic acid binding // inferred from direct assay /// 0005540 // hyaluronic acid binding // non-traceable author statement </td> <td> -68.05 </td> <td> 99.00 </td> <td> -2.80 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212193_s_at </td> <td> 212193_s_at </td> <td> BE881529 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE881529 /FEA=EST /DB_XREF=gi:10330305 /DB_XREF=est:601490242F1 /CLONE=IMAGE:3892546 /UG=Hs.6214 KIAA0731 protein </td> <td> BE881529 </td> <td> La ribonucleoprotein domain family, member 1 </td> <td> LARP1 </td> <td> 23367 </td> <td> NM_015315 /// NM_033551 /// XM_005268404 /// XM_005268406 /// XM_005268407 /// XM_005268408 /// XM_006714775 /// XM_006714776 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0016239 // positive regulation of macroautophagy // inferred from mutant phenotype /// 0031929 // TOR signaling // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031931 // TORC1 complex // inferred from direct assay </td> <td> 0000339 // RNA cap binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008190 // eukaryotic initiation factor 4E binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from mutant phenotype /// 0031369 // translation initiation factor binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048027 // mRNA 5'-UTR binding // inferred from direct assay </td> <td> 47.00 </td> <td> 177.97 </td> <td> 2.80 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208656_s_at </td> <td> 208656_s_at </td> <td> AF135162 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF135162.1 /DEF=Homo sapiens cyclin I (CYC1) mRNA, complete cds. /FEA=mRNA /GEN=CYC1 /PROD=cyclin I /DB_XREF=gi:7259481 /UG=Hs.79933 cyclin I /FL=gb:D50310.1 gb:BC000420.1 gb:BC004975.1 gb:NM_006835.1 gb:AF135162.1 </td> <td> AF135162 </td> <td> cyclin I </td> <td> CCNI </td> <td> 10983 </td> <td> NM_006835 </td> <td> 0007283 // spermatogenesis // non-traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td>  </td> <td>  </td> <td> -239.85 </td> <td> 885.02 </td> <td> -2.80 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 209777_s_at </td> <td> 209777_s_at </td> <td> AF004354 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF004354.1 /DEF=Homo sapiens folate carrier mRNA, complete cds. /FEA=mRNA /PROD=folate carrier /DB_XREF=gi:2209134 /UG=Hs.84190 solute carrier family 19 (folate transporter), member 1 /FL=gb:U15939.1 gb:AF004354.1 gb:NM_003056.1 gb:U19720.1 gb:U17566.1 </td> <td> AF004354 </td> <td> uncharacterized LOC101928717 /// solute carrier family 19 (folate transporter), member 1 </td> <td> LOC101928717 /// SLC19A1 </td> <td> 6573 /// 101928717 </td> <td> NM_001205206 /// NM_001205207 /// NM_003056 /// NM_194255 /// XM_005261164 /// XR_244332 /// XR_249004 /// XR_254049 </td> <td> 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015884 // folic acid transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046655 // folic acid metabolic process // traceable author statement /// 0051958 // methotrexate transport // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005542 // folic acid binding // inferred from electronic annotation /// 0008517 // folic acid transporter activity // inferred from electronic annotation /// 0008518 // reduced folate carrier activity // inferred from electronic annotation /// 0015350 // methotrexate transporter activity // inferred from electronic annotation </td> <td> 33.02 </td> <td> 46.31 </td> <td> 2.80 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 45572_s_at </td> <td> 45572_s_at </td> <td> AW009695 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AW009695:ws86b07.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2504821 /clone_end=3' /gb=AW009695 /gi=5858473 /ug=Hs.238296 /len=491 </td> <td> AW009695 </td> <td> golgi-associated, gamma adaptin ear containing, ARF binding protein 1 </td> <td> GGA1 </td> <td> 26088 </td> <td> NM_001001560 /// NM_001001561 /// NM_001172687 /// NM_001172688 /// NM_013365 /// XM_005261517 /// XM_005261518 /// XM_005261520 /// XM_005261522 /// XM_006724228 /// XM_006724229 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 89.32 </td> <td> 334.91 </td> <td> 2.80 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212156_at </td> <td> 212156_at </td> <td> AA812224 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA812224 /FEA=EST /DB_XREF=gi:2881835 /DB_XREF=est:ob84g11.s1 /CLONE=IMAGE:1338116 /UG=Hs.9452 KIAA0770 protein </td> <td> AA812224 </td> <td> vacuolar protein sorting 39 homolog (S. cerevisiae) </td> <td> VPS39 </td> <td> 23339 </td> <td> NM_015289 /// XM_005254259 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030897 // HOPS complex // inferred from direct assay /// 0031902 // late endosome membrane // inferred from electronic annotation </td> <td> 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 29.70 </td> <td> 66.12 </td> <td> 2.80 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 221735_at </td> <td> 221735_at </td> <td> H04342 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:H04342 /FEA=EST /DB_XREF=gi:867275 /DB_XREF=est:yj10g11.s1 /CLONE=IMAGE:148388 /UG=Hs.109778 KIAA1449 protein </td> <td> H04342 </td> <td> WD repeat domain 48 </td> <td> WDR48 </td> <td> 57599 </td> <td> NM_020839 /// XM_005265346 </td> <td> 0016032 // viral process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -59.17 </td> <td> 42.41 </td> <td> -2.80 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 222154_s_at </td> <td> 222154_s_at </td> <td> AK002064 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK002064.1 /DEF=Homo sapiens cDNA FLJ11202 fis, clone PLACE1007746. /FEA=mRNA /DB_XREF=gi:7023720 /UG=Hs.5297 DKFZP564A2416 protein </td> <td> AK002064 </td> <td> spermatogenesis associated, serine-rich 2-like </td> <td> SPATS2L </td> <td> 26010 </td> <td> NM_001100422 /// NM_001100423 /// NM_001100424 /// NM_001282735 /// NM_001282743 /// NM_001282744 /// NM_015535 /// XM_005246454 /// XM_005246456 /// XM_005246457 /// XM_005246458 /// XM_005246459 /// XM_005246460 /// XM_006712409 /// XM_006712410 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -78.55 </td> <td> 393.02 </td> <td> -2.80 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200701_at </td> <td> 200701_at </td> <td> NM_006432 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006432.1 /DEF=Homo sapiens epididymal secretory protein (19.5kD) (HE1), mRNA. /FEA=mRNA /GEN=HE1 /PROD=epididymal secretory protein (19.5kD) /DB_XREF=gi:5453677 /UG=Hs.119529 epididymal secretory protein (19.5kD) /FL=gb:BC002532.1 gb:NM_006432.1 </td> <td> NM_006432 </td> <td> Niemann-Pick disease, type C2 </td> <td> NPC2 </td> <td> 10577 </td> <td> NM_006432 /// XM_006720004 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0015914 // phospholipid transport // traceable author statement /// 0019747 // regulation of isoprenoid metabolic process // traceable author statement /// 0030301 // cholesterol transport // inferred from direct assay /// 0032366 // intracellular sterol transport // inferred from direct assay /// 0032367 // intracellular cholesterol transport // inferred from direct assay /// 0032367 // intracellular cholesterol transport // inferred from genetic interaction /// 0033344 // cholesterol efflux // inferred from direct assay /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0046836 // glycolipid transport // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015485 // cholesterol binding // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> -73.08 </td> <td> 715.84 </td> <td> -2.79 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 205812_s_at </td> <td> 205812_s_at </td> <td> NM_006588 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006588.1 /DEF=Homo sapiens sulfotransferase family, cytosolic, 1C, member 2 (SULT1C2), mRNA.  /FEA=mRNA /GEN=SULT1C2 /PROD=SULT1C sulfotransferase /DB_XREF=gi:5730070 /UG=Hs.312644 sulfotransferase family, cytosolic, 1C, member 2 /FL=gb:AF055584.1 gb:NM_006588.1 </td> <td> NM_006588 </td> <td> transmembrane emp24 protein transport domain containing 9 </td> <td> TMED9 </td> <td> 54732 </td> <td> NM_017510 </td> <td> 0006805 // xenobiotic metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0010638 // positive regulation of organelle organization // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032527 // protein exit from endoplasmic reticulum // inferred from mutant phenotype /// 0034498 // early endosome to Golgi transport // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0048205 // COPI coating of Golgi vesicle // inferred from mutant phenotype /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement /// 0051923 // sulfation // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030140 // trans-Golgi network transport vesicle // traceable author statement /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008146 // sulfotransferase activity // inferred from direct assay /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0008146 // sulfotransferase activity // non-traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from physical interaction </td> <td> 172.68 </td> <td> 1018.46 </td> <td> 2.79 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 213271_s_at </td> <td> 213271_s_at </td> <td> AB029040 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB029040.1 /DEF=Homo sapiens mRNA for KIAA1117 protein, partial cds. /FEA=mRNA /GEN=KIAA1117 /PROD=KIAA1117 protein /DB_XREF=gi:5689570 /UG=Hs.278398 KIAA1117 protein </td> <td> AB029040 </td> <td> dopey family member 1 </td> <td> DOPEY1 </td> <td> 23033 </td> <td> NM_001199942 /// NM_015018 /// XM_006715393 /// XM_006715394 /// XM_006715395 /// XM_006715396 /// XM_006715397 /// XM_006715398 /// XM_006715399 /// XM_006715400 /// XM_006715401 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from sequence or structural similarity /// 0007029 // endoplasmic reticulum organization // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from sequence or structural similarity </td> <td> 0005488 // binding // inferred from electronic annotation </td> <td> 25.90 </td> <td> 56.50 </td> <td> 2.79 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200725_x_at </td> <td> 200725_x_at </td> <td> NM_006013 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006013.1 /DEF=Homo sapiens ribosomal protein L10 (RPL10), mRNA. /FEA=mRNA /GEN=RPL10 /PROD=ribosomal protein L10 /DB_XREF=gi:5174430 /UG=Hs.29797 ribosomal protein L10 /FL=gb:BC003358.1 gb:M73791.1 gb:M64241.1 gb:NM_006013.1 </td> <td> NM_006013 </td> <td> ribosomal protein L10 /// small nucleolar RNA, H/ACA box 70 </td> <td> RPL10 /// SNORA70 </td> <td> 6134 /// 26778 </td> <td> NM_001256577 /// NM_001256580 /// NM_006013 /// NR_000011 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1028.30 </td> <td> 3339.35 </td> <td> -2.79 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212320_at </td> <td> 212320_at </td> <td> BC001002 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BC001002.1 /DEF=Homo sapiens, clone IMAGE:3447696, mRNA, partial cds. /FEA=mRNA /PROD=Unknown (protein for IMAGE:3447696) /DB_XREF=gi:12654358 /UG=Hs.179661 tubulin, beta polypeptide </td> <td> BC001002 </td> <td> tubulin, beta class I </td> <td> TUBB </td> <td> 203068 </td> <td> NM_001293212 /// NM_001293213 /// NM_001293214 /// NM_001293215 /// NM_001293216 /// NM_178014 /// NR_120608 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0007017 // microtubule-based process // traceable author statement /// 0009987 // cellular process // inferred from direct assay /// 0030705 // cytoskeleton-dependent intracellular transport // traceable author statement /// 0042267 // natural killer cell mediated cytotoxicity // non-traceable author statement /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051297 // centrosome organization // inferred from electronic annotation /// 0051301 // cell division // traceable author statement </td> <td> 0000242 // pericentriolar material // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005641 // nuclear envelope lumen // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0044297 // cell body // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0032794 // GTPase activating protein binding // inferred from electronic annotation /// 0042288 // MHC class I protein binding // inferred from direct assay </td> <td> 142.13 </td> <td> 1036.31 </td> <td> 2.79 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200727_s_at </td> <td> 200727_s_at </td> <td> AA699583 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA699583 /FEA=EST /DB_XREF=gi:2703730 /DB_XREF=est:zi42g07.s1 /CLONE=IMAGE:433500 /UG=Hs.42915 ARP2 (actin-related protein 2, yeast) homolog /FL=gb:AF006082.1 gb:NM_005722.1 </td> <td> AA699583 </td> <td> ARP2 actin-related protein 2 homolog (yeast) </td> <td> ACTR2 </td> <td> 10097 </td> <td> NM_001005386 /// NM_005722 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0008356 // asymmetric cell division // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0033206 // meiotic cytokinesis // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051321 // meiotic cell cycle // inferred from electronic annotation /// 0051653 // spindle localization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // inferred from reviewed computational analysis /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030478 // actin cap // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> -246.82 </td> <td> 436.26 </td> <td> -2.79 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208884_s_at </td> <td> 208884_s_at </td> <td> AF006010 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF006010.1 /DEF=Homo sapiens progestin induced protein (EDD) mRNA, complete cds. /FEA=mRNA /GEN=EDD /PROD=progestin induced protein /DB_XREF=gi:4101694 /UG=Hs.278428 progestin induced protein /FL=gb:NM_015902.2 gb:AF006010.1 gb:U95000.1 </td> <td> AF006010 </td> <td> ubiquitin protein ligase E3 component n-recognin 5 </td> <td> UBR5 </td> <td> 51366 </td> <td> NM_001282873 /// NM_015902 /// XM_005250956 /// XM_005250957 /// XM_005250959 /// XM_005250960 /// XM_005250962 /// XR_242392 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from mutant phenotype /// 0035413 // positive regulation of catenin import into nucleus // inferred from mutant phenotype /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0050847 // progesterone receptor signaling pathway // inferred from direct assay /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 1901315 // negative regulation of histone H2A K63-linked ubiquitination // inferred from mutant phenotype /// 2000780 // negative regulation of double-strand break repair // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -73.03 </td> <td> 261.29 </td> <td> -2.79 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 207564_x_at </td> <td> 207564_x_at </td> <td> NM_003605 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003605.2 /DEF=Homo sapiens O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) (OGT), mRNA.  /FEA=mRNA /GEN=OGT /PROD=O-linked GlcNAc transferase /DB_XREF=gi:6006036 /UG=Hs.100293 O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) /FL=gb:U77413.1 gb:NM_003605.2 </td> <td> NM_003605 </td> <td> O-linked N-acetylglucosamine (GlcNAc) transferase </td> <td> OGT </td> <td> 8473 </td> <td> NM_003605 /// NM_181672 /// NM_181673 /// XM_005262308 /// XM_006724714 </td> <td> 0006110 // regulation of glycolytic process // inferred from direct assay /// 0006325 // chromatin organization // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006493 // protein O-linked glycosylation // inferred from direct assay /// 0006493 // protein O-linked glycosylation // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007584 // response to nutrient // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0032868 // response to insulin // inferred from direct assay /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0035020 // regulation of Rac protein signal transduction // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay /// 0045862 // positive regulation of proteolysis // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046626 // regulation of insulin receptor signaling pathway // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from direct assay /// 0061087 // positive regulation of histone H3-K27 methylation // inferred from mutant phenotype /// 0071300 // cellular response to retinoic acid // inferred from mutant phenotype /// 0080182 // histone H3-K4 trimethylation // inferred from mutant phenotype /// 0090526 // regulation of gluconeogenesis involved in cellular glucose homeostasis // inferred from sequence or structural similarity </td> <td> 0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0008047 // enzyme activator activity // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0008375 // acetylglucosaminyltransferase activity // traceable author statement /// 0016262 // protein N-acetylglucosaminyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0043995 // histone acetyltransferase activity (H4-K5 specific) // inferred from direct assay /// 0043996 // histone acetyltransferase activity (H4-K8 specific) // inferred from direct assay /// 0046972 // histone acetyltransferase activity (H4-K16 specific) // inferred from direct assay /// 0097363 // protein O-GlcNAc transferase activity // inferred from sequence or structural similarity </td> <td> 37.58 </td> <td> 80.14 </td> <td> 2.79 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212354_at </td> <td> 212354_at </td> <td> BE500977 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE500977 /FEA=EST /DB_XREF=gi:9703385 /DB_XREF=est:7a33h02.x1 /CLONE=IMAGE:3220563 /UG=Hs.70823 KIAA1077 protein </td> <td> BE500977 </td> <td> sulfatase 1 </td> <td> SULF1 </td> <td> 23213 </td> <td> NM_001128204 /// NM_001128205 /// NM_001128206 /// NM_015170 /// XM_006716438 /// XM_006716439 /// XM_006716440 /// XM_006716441 /// XM_006716442 </td> <td> 0001822 // kidney development // inferred from sequence or structural similarity /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0002063 // chondrocyte development // inferred from sequence or structural similarity /// 0003094 // glomerular filtration // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0014846 // esophagus smooth muscle contraction // inferred from sequence or structural similarity /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030177 // positive regulation of Wnt signaling pathway // inferred from direct assay /// 0030201 // heparan sulfate proteoglycan metabolic process // inferred from direct assay /// 0030201 // heparan sulfate proteoglycan metabolic process // non-traceable author statement /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030513 // positive regulation of BMP signaling pathway // inferred from mutant phenotype /// 0032836 // glomerular basement membrane development // inferred from sequence or structural similarity /// 0035860 // glial cell-derived neurotrophic factor receptor signaling pathway // inferred from sequence or structural similarity /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048706 // embryonic skeletal system development // inferred from sequence or structural similarity /// 0051216 // cartilage development // inferred from sequence or structural similarity /// 0060348 // bone development // inferred from sequence or structural similarity /// 0060384 // innervation // inferred from sequence or structural similarity /// 0060686 // negative regulation of prostatic bud formation // inferred from sequence or structural similarity </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005795 // Golgi stack // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // inferred from direct assay /// 0004065 // arylsulfatase activity // inferred from mutant phenotype /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from direct assay /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from mutant phenotype /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -47.70 </td> <td> 90.72 </td> <td> -2.79 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212676_at </td> <td> 212676_at </td> <td> AW293356 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW293356 /FEA=EST /DB_XREF=gi:6699992 /DB_XREF=est:UI-H-BI2-ahl-c-11-0-UI.s1 /CLONE=IMAGE:2727165 /UG=Hs.58220 Homo sapiens cDNA: FLJ23005 fis, clone LNG00396, highly similar to AF055023 Homo sapiens clone 24723 mRNA sequence </td> <td> AW293356 </td> <td> neurofibromin-like /// neurofibromin 1 </td> <td> LOC101930150 /// NF1 </td> <td> 4763 /// 101930150 </td> <td> NM_000267 /// NM_001042492 /// NM_001128147 /// XM_005257983 /// XM_005257984 /// XM_006721922 /// XM_006721923 /// XM_006721924 /// XM_006721925 /// XM_006721926 /// XM_006721927 /// XM_006721928 </td> <td> 0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from sequence or structural similarity /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0001953 // negative regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0007154 // cell communication // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from sequence or structural similarity /// 0007406 // negative regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation /// 0014044 // Schwann cell development // inferred from sequence or structural similarity /// 0014065 // phosphatidylinositol 3-kinase signaling // inferred from sequence or structural similarity /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021897 // forebrain astrocyte development // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from sequence or structural similarity /// 0022011 // myelination in peripheral nervous system // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030325 // adrenal gland development // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032318 // regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from mutant phenotype /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043473 // pigmentation // inferred from sequence or structural similarity /// 0043525 // positive regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0045124 // regulation of bone resorption // inferred from sequence or structural similarity /// 0045671 // negative regulation of osteoclast differentiation // inferred from electronic annotation /// 0045685 // regulation of glial cell differentiation // inferred from sequence or structural similarity /// 0045762 // positive regulation of adenylate cyclase activity // inferred from sequence or structural similarity /// 0045765 // regulation of angiogenesis // inferred from mutant phenotype /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0046929 // negative regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from sequence or structural similarity /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048745 // smooth muscle tissue development // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0050890 // cognition // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 1902043 // positive regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0030424 // axon // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0031235 // intrinsic component of the cytoplasmic side of the plasma membrane // not recorded </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0008429 // phosphatidylethanolamine binding // inferred from direct assay /// 0031210 // phosphatidylcholine binding // inferred from direct assay </td> <td> -50.60 </td> <td> 82.38 </td> <td> -2.78 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201034_at </td> <td> 201034_at </td> <td> BE545756 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE545756 /FEA=EST /DB_XREF=gi:9774401 /DB_XREF=est:601076920F1 /CLONE=IMAGE:3462940 /UG=Hs.8110 L-3-hydroxyacyl-Coenzyme A dehydrogenase, short chain /FL=gb:BC000306.1 gb:NM_005327.1 </td> <td> BE545756 </td> <td> adducin 3 (gamma) </td> <td> ADD3 </td> <td> 120 </td> <td> NM_001121 /// NM_016824 /// NM_019903 /// XM_005269529 /// XM_005269530 /// XM_005269531 /// XM_005269533 /// XM_005269534 /// XM_005269535 /// XM_006717626 /// XM_006717627 /// XM_006717628 /// XM_006717629 </td> <td>  </td> <td> 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // traceable author statement </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation </td> <td> -60.05 </td> <td> 367.65 </td> <td> -2.78 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 222000_at </td> <td> 222000_at </td> <td> AI915947 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI915947 /FEA=EST /DB_XREF=gi:5635802 /DB_XREF=est:wg96e01.x1 /CLONE=IMAGE:2379096 /UG=Hs.28212 ESTs </td> <td> AI915947 </td> <td> chromosome 1 open reading frame 174 </td> <td> C1orf174 </td> <td> 339448 </td> <td> NM_207356 /// XM_005244743 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td>  </td> <td> 39.13 </td> <td> 113.99 </td> <td> 2.78 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 211177_s_at </td> <td> 211177_s_at </td> <td> AB019695 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB019695.1 /DEF=Homo sapiens mRNA for thioredoxin reductase II beta, complete cds. /FEA=mRNA /PROD=thioredoxin reductase II beta /DB_XREF=gi:4827178 /UG=Hs.12971 thioredoxin reductase beta /FL=gb:AB019695.1 </td> <td> AB019695 </td> <td> thioredoxin reductase 2 </td> <td> TXNRD2 </td> <td> 10587 </td> <td> NM_001282512 /// NM_006440 /// NM_145747 /// NM_145748 </td> <td> 0000305 // response to oxygen radical // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0004791 // thioredoxin-disulfide reductase activity // not recorded /// 0004791 // thioredoxin-disulfide reductase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016668 // oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation </td> <td> 116.10 </td> <td> 351.10 </td> <td> 2.78 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 215207_x_at </td> <td> 215207_x_at </td> <td> BF695847 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF695847 /FEA=EST /DB_XREF=gi:11981255 /DB_XREF=est:601852205F1 /CLONE=IMAGE:4076232 /UG=Hs.301917 YDD19 protein </td> <td> BF695847 </td> <td> nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) /// nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) pseudogene 3 </td> <td> NUS1 /// NUS1P3 </td> <td> 11049 /// 116150 </td> <td> NM_138459 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032367 // intracellular cholesterol transport // inferred from genetic interaction /// 0055092 // sterol homeostasis // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016765 // transferase activity, transferring alkyl or aryl (other than methyl) groups // inferred from electronic annotation </td> <td> 33.22 </td> <td> 74.99 </td> <td> 2.78 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 214383_x_at </td> <td> 214383_x_at </td> <td> BF063121 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF063121 /FEA=EST /DB_XREF=gi:10822031 /DB_XREF=est:7h83f11.x1 /CLONE=IMAGE:3322605 /UG=Hs.281706 sortilin 1 </td> <td> BF063121 </td> <td> kelch domain containing 3 </td> <td> KLHDC3 </td> <td> 116138 </td> <td> NM_001242872 /// NM_057161 /// NR_040101 </td> <td> 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // non-traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 46.63 </td> <td> 167.01 </td> <td> 2.78 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200821_at </td> <td> 200821_at </td> <td> NM_013995 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013995.1 /DEF=Homo sapiens lysosomal-associated membrane protein 2 (LAMP2), transcript variant LAMP2B, mRNA.  /FEA=mRNA /GEN=LAMP2 /PROD=lysosomal-associated membrane protein 2precursor /DB_XREF=gi:7669502 /UG=Hs.8262 lysosomal-associated membrane protein 2 /FL=gb:U36336.1 gb:BC002965.1 gb:NM_013995.1 </td> <td> NM_013995 </td> <td> lysosomal-associated membrane protein 2 </td> <td> LAMP2 </td> <td> 3920 </td> <td> NM_001122606 /// NM_002294 /// NM_013995 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0050821 // protein stabilization // inferred from sequence or structural similarity </td> <td> 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031088 // platelet dense granule membrane // traceable author statement /// 0031902 // late endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0019899 // enzyme binding // inferred from physical interaction </td> <td> 95.20 </td> <td> 218.88 </td> <td> 2.78 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 210802_s_at </td> <td> 210802_s_at </td> <td> BC002841 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002841.1 /DEF=Homo sapiens, Similar to putative dimethyladenosine transferase, clone MGC:3382, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to putative dimethyladenosinetransferase /DB_XREF=gi:12803982 /UG=Hs.125819 putative dimethyladenosine transferase /FL=gb:BC002841.1 </td> <td> BC002841 </td> <td> DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae) </td> <td> DIMT1 </td> <td> 27292 </td> <td> NM_014473 </td> <td> 0000154 // rRNA modification // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0031167 // rRNA methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000179 // rRNA (adenine-N6,N6-)-dimethyltransferase activity // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008649 // rRNA methyltransferase activity // inferred from electronic annotation /// 0016433 // rRNA (adenine) methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0052909 // 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity // inferred from electronic annotation </td> <td> 31.05 </td> <td> 66.72 </td> <td> 2.77 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 203065_s_at </td> <td> 203065_s_at </td> <td> NM_001753 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001753.2 /DEF=Homo sapiens caveolin 1, caveolae protein, 22kD (CAV1), mRNA. /FEA=mRNA /GEN=CAV1 /PROD=caveolin 1 /DB_XREF=gi:4580417 /UG=Hs.323469 caveolin 1, caveolae protein, 22kD /FL=gb:NM_001753.2 </td> <td> NM_001753 </td> <td> caveolin 1, caveolae protein, 22kDa </td> <td> CAV1 </td> <td> 857 </td> <td> NM_001172895 /// NM_001172896 /// NM_001172897 /// NM_001753 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000188 // inactivation of MAPK activity // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001937 // negative regulation of endothelial cell proliferation // inferred from sequence or structural similarity /// 0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002931 // response to ischemia // inferred from electronic annotation /// 0003057 // regulation of the force of heart contraction by chemical signal // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from sequence or structural similarity /// 0006816 // calcium ion transport // inferred from sequence or structural similarity /// 0006874 // cellular calcium ion homeostasis // inferred from sequence or structural similarity /// 0006940 // regulation of smooth muscle contraction // inferred from sequence or structural similarity /// 0007519 // skeletal muscle tissue development // inferred from sequence or structural similarity /// 0007595 // lactation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from expression pattern /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from sequence or structural similarity /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016050 // vesicle organization // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019217 // regulation of fatty acid metabolic process // inferred from sequence or structural similarity /// 0019915 // lipid storage // inferred from sequence or structural similarity /// 0030193 // regulation of blood coagulation // inferred from mutant phenotype /// 0030301 // cholesterol transport // traceable author statement /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0030857 // negative regulation of epithelial cell differentiation // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0031295 // T cell costimulation // inferred from direct assay /// 0031397 // negative regulation of protein ubiquitination // inferred from mutant phenotype /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032507 // maintenance of protein location in cell // inferred from sequence or structural similarity /// 0032570 // response to progesterone // inferred from direct assay /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033484 // nitric oxide homeostasis // inferred from sequence or structural similarity /// 0042310 // vasoconstriction // inferred from electronic annotation /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from sequence or structural similarity /// 0042632 // cholesterol homeostasis // traceable author statement /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043627 // response to estrogen // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045019 // negative regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045907 // positive regulation of vasoconstriction // inferred from sequence or structural similarity /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0046426 // negative regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0048550 // negative regulation of pinocytosis // inferred from mutant phenotype /// 0048554 // positive regulation of metalloenzyme activity // inferred from sequence or structural similarity /// 0050900 // leukocyte migration // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051001 // negative regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from sequence or structural similarity /// 0051480 // cytosolic calcium ion homeostasis // inferred from direct assay /// 0051592 // response to calcium ion // inferred from sequence or structural similarity /// 0051899 // membrane depolarization // inferred from sequence or structural similarity /// 0052547 // regulation of peptidase activity // inferred from sequence or structural similarity /// 0055074 // calcium ion homeostasis // inferred from sequence or structural similarity /// 0060056 // mammary gland involution // inferred from sequence or structural similarity /// 0070836 // caveola assembly // inferred from mutant phenotype /// 0071455 // cellular response to hyperoxia // inferred from mutant phenotype /// 0072584 // caveolin-mediated endocytosis // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 0097190 // apoptotic signaling pathway // inferred from mutant phenotype /// 2000286 // receptor internalization involved in canonical Wnt signaling pathway // inferred from mutant phenotype /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from direct assay /// 0000139 // Golgi membrane // traceable author statement /// 0002080 // acrosomal membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005811 // lipid particle // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0005901 // caveola // non-traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0005102 // receptor binding // inferred from physical interaction /// 0005113 // patched binding // non-traceable author statement /// 0005198 // structural molecule activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0015485 // cholesterol binding // traceable author statement /// 0016504 // peptidase activator activity // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from physical interaction /// 0032947 // protein complex scaffold // traceable author statement /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction </td> <td> -390.77 </td> <td> 1997.26 </td> <td> -2.77 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201591_s_at </td> <td> 201591_s_at </td> <td> NM_007184 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007184.1 /DEF=Homo sapiens imidazoline receptor candidate (I-1), mRNA. /FEA=mRNA /GEN=I-1 /PROD=imidazoline receptor candidate /DB_XREF=gi:6005787 /UG=Hs.26285 imidazoline receptor candidate /FL=gb:AF082516.1 gb:NM_007184.1 </td> <td> NM_007184 </td> <td> nischarin </td> <td> NISCH </td> <td> 11188 </td> <td> NM_001276293 /// NM_001276294 /// NM_007184 /// XM_005264839 /// XM_006712955 </td> <td> 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0048243 // norepinephrine secretion // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation </td> <td> 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0008227 // G-protein coupled amine receptor activity // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 109.33 </td> <td> 353.61 </td> <td> 2.77 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 217843_s_at </td> <td> 217843_s_at </td> <td> NM_014166 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014166.1 /DEF=Homo sapiens HSPC126 protein (HSPC126), mRNA. /FEA=mRNA /GEN=HSPC126 /PROD=HSPC126 protein /DB_XREF=gi:7661787 /UG=Hs.181112 HSPC126 protein /FL=gb:AF300618.1 gb:BC005189.1 gb:AF161475.1 gb:AF230381.1 gb:NM_014166.1 </td> <td> NM_014166 </td> <td> mediator complex subunit 4 </td> <td> MED4 </td> <td> 29079 </td> <td> NM_001270629 /// NM_014166 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016592 // mediator complex // inferred from direct assay </td> <td> 0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay </td> <td> 27.62 </td> <td> 37.69 </td> <td> 2.77 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 210460_s_at </td> <td> 210460_s_at </td> <td> AB033605 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB033605.1 /DEF=Homo sapiens mRNA for pUb-R5, complete cds. /FEA=mRNA /GEN=hpUb-R5 /PROD=pUb-R5 /DB_XREF=gi:8918352 /UG=Hs.148495 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 /FL=gb:AB033605.1 </td> <td> AB033605 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 </td> <td> PSMD4 </td> <td> 5710 </td> <td> NM_002810 /// NM_153822 /// XM_005245354 /// XM_006711464 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008540 // proteasome regulatory particle, base subcomplex // inferred from electronic annotation /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -71.90 </td> <td> 267.23 </td> <td> -2.77 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200851_s_at </td> <td> 200851_s_at </td> <td> NM_014761 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014761.1 /DEF=Homo sapiens KIAA0174 gene product (KIAA0174), mRNA. /FEA=mRNA /GEN=KIAA0174 /PROD=KIAA0174 gene product /DB_XREF=gi:7661971 /UG=Hs.75824 KIAA0174 gene product /FL=gb:D79996.1 gb:BC000430.1 gb:BC004359.1 gb:NM_014761.1 </td> <td> NM_014761 </td> <td> increased sodium tolerance 1 homolog (yeast) </td> <td> IST1 </td> <td> 9798 </td> <td> NM_001270975 /// NM_001270976 /// NM_001270977 /// NM_001270978 /// NM_001270979 /// NM_014761 </td> <td> 0000910 // cytokinesis // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008104 // protein localization // inferred from mutant phenotype /// 0009838 // abscission // inferred from direct assay /// 0009838 // abscission // inferred from mutant phenotype /// 0019076 // viral release from host cell // inferred from direct assay /// 0045184 // establishment of protein localization // inferred from mutant phenotype /// 0045862 // positive regulation of proteolysis // inferred from direct assay /// 0046745 // viral capsid secondary envelopment // inferred from direct assay /// 0048672 // positive regulation of collateral sprouting // inferred from electronic annotation /// 0051301 // cell division // inferred from mutant phenotype </td> <td> 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0090543 // Flemming body // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from direct assay /// 0090541 // MIT domain binding // inferred from physical interaction </td> <td> -54.28 </td> <td> 452.06 </td> <td> -2.77 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208636_at </td> <td> 208636_at </td> <td> AI082078 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI082078 /FEA=EST /DB_XREF=gi:3418870 /DB_XREF=est:oz52g10.x1 /CLONE=IMAGE:1679010 /UG=Hs.119000 actinin, alpha 1 /FL=gb:NM_001102.2 gb:BC003576.1 </td> <td> AI082078 </td> <td> actinin, alpha 1 </td> <td> ACTN1 </td> <td> 87 </td> <td> NM_001102 /// NM_001130004 /// NM_001130005 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0048041 // focal adhesion assembly // inferred from mutant phenotype /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051271 // negative regulation of cellular component movement // inferred from mutant phenotype /// 0051764 // actin crosslink formation // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from mutant phenotype /// 0016020 // membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031143 // pseudopodium // traceable author statement /// 0042995 // cell projection // inferred from direct assay /// 0043197 // dendritic spine // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017166 // vinculin binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation </td> <td> 236.35 </td> <td> 969.12 </td> <td> 2.77 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 220925_at </td> <td> 220925_at </td> <td> NM_021929 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021929.1 /DEF=Homo sapiens hypothetical protein FLJ21613 similar to rat corneal wound healing related protein (FLJ21613), mRNA.  /FEA=mRNA /GEN=FLJ21613 /PROD=hypothetical protein FLJ21613 similar to ratcorneal wound healing related protein /DB_XREF=gi:11345463 /UG=Hs.300952 hypothetical protein FLJ21613 similar to rat corneal wound healing related protein /FL=gb:NM_021929.1 </td> <td> NM_021929 </td> <td> N(alpha)-acetyltransferase 35, NatC auxiliary subunit </td> <td> NAA35 </td> <td> 60560 </td> <td> NM_024635 /// XM_005252126 /// XM_005252127 /// XM_005252128 /// XM_006717231 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0048659 // smooth muscle cell proliferation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005844 // polysome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0031417 // NatC complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 31.15 </td> <td> 90.10 </td> <td> 2.77 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201530_x_at </td> <td> 201530_x_at </td> <td> NM_001416 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001416.1 /DEF=Homo sapiens eukaryotic translation initiation factor 4A, isoform 1 (EIF4A1), mRNA.  /FEA=mRNA /GEN=EIF4A1 /PROD=eukaryotic translation initiation factor 4A,isoform 1 /DB_XREF=gi:4503528 /UG=Hs.129673 eukaryotic translation initiation factor 4A, isoform 1 /FL=gb:NM_001416.1 </td> <td> NM_001416 </td> <td> eukaryotic translation initiation factor 4A1 /// uncharacterized LOC101928634 /// SENP3-EIF4A1 readthrough (NMD candidate) /// small nucleolar RNA, H/ACA box 48 /// small nucleolar RNA, H/ACA box 67 /// small nucleolar RNA, C/D box 10 </td> <td> EIF4A1 /// LOC101928634 /// SENP3-EIF4A1 /// SNORA48 /// SNORA67 /// SNORD10 </td> <td> 1973 /// 26781 /// 652965 /// 652966 /// 100533955 /// 101928634 </td> <td> NM_001204510 /// NM_001416 /// NR_002604 /// NR_002912 /// NR_002918 /// NR_037926 /// XR_244579 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031100 // organ regeneration // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000339 // RNA cap binding // traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003729 // mRNA binding // traceable author statement /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -728.63 </td> <td> 2897.84 </td> <td> -2.77 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 203959_s_at </td> <td> 203959_s_at </td> <td> NM_014870 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014870.1 /DEF=Homo sapiens KIAA0478 gene product (KIAA0478), mRNA. /FEA=mRNA /GEN=KIAA0478 /PROD=KIAA0478 gene product /DB_XREF=gi:7662153 /UG=Hs.4236 KIAA0478 gene product /FL=gb:AB007947.1 gb:NM_014870.1 </td> <td> NM_014870 </td> <td> zinc finger and BTB domain containing 40 </td> <td> ZBTB40 </td> <td> 9923 </td> <td> NM_001083621 /// NM_014870 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0030282 // bone mineralization // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 34.18 </td> <td> 66.86 </td> <td> 2.77 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201603_at </td> <td> 201603_at </td> <td> AI817061 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI817061 /FEA=EST /DB_XREF=gi:5436140 /DB_XREF=est:wj76e05.x1 /CLONE=IMAGE:2408768 /UG=Hs.16533 myosin phosphatase, target subunit 1 /FL=gb:NM_002480.1 </td> <td> AI817061 </td> <td> protein phosphatase 1, regulatory subunit 12A </td> <td> PPP1R12A </td> <td> 4659 </td> <td> NM_001143885 /// NM_001143886 /// NM_001244990 /// NM_001244992 /// NM_002480 /// XM_005268885 /// XM_005268886 /// XM_005268887 /// XM_005268888 /// XM_005268889 /// XM_005268891 /// XM_005268892 /// XM_005268893 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from mutant phenotype /// 0007067 // mitotic nuclear division // inferred from mutant phenotype /// 0007165 // signal transduction // non-traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0035507 // regulation of myosin-light-chain-phosphatase activity // inferred from direct assay /// 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046822 // regulation of nucleocytoplasmic transport // inferred from electronic annotation /// 0051297 // centrosome organization // inferred from mutant phenotype </td> <td> 0000776 // kinetochore // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0043292 // contractile fiber // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay </td> <td> 0004857 // enzyme inhibitor activity // inferred from direct assay /// 0004871 // signal transducer activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019208 // phosphatase regulator activity // inferred from direct assay /// 0019208 // phosphatase regulator activity // inferred from mutant phenotype /// 0019901 // protein kinase binding // inferred from physical interaction /// 0071889 // 14-3-3 protein binding // inferred from direct assay </td> <td> 47.05 </td> <td> 142.60 </td> <td> 2.76 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202587_s_at </td> <td> 202587_s_at </td> <td> BC001116 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001116.1 /DEF=Homo sapiens, adenylate kinase 1, clone MGC:1808, mRNA, complete cds.  /FEA=mRNA /PROD=adenylate kinase 1 /DB_XREF=gi:12654562 /UG=Hs.76240 adenylate kinase 1 /FL=gb:BC001116.1 gb:NM_000476.1 gb:AB021871.1 </td> <td> BC001116 </td> <td> adenylate kinase 1 </td> <td> AK1 </td> <td> 203 </td> <td> NM_000476 /// XM_005251786 /// XM_005251788 </td> <td> 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006165 // nucleoside diphosphate phosphorylation // inferred from direct assay /// 0006172 // ADP biosynthetic process // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0009142 // nucleoside triphosphate biosynthetic process // inferred from direct assay /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046033 // AMP metabolic process // inferred from electronic annotation /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0046939 // nucleotide phosphorylation // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0001520 // outer dense fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0036126 // sperm flagellum // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004017 // adenylate kinase activity // inferred from electronic annotation /// 0004550 // nucleoside diphosphate kinase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation </td> <td> -43.42 </td> <td> 236.64 </td> <td> -2.76 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212411_at </td> <td> 212411_at </td> <td> BE747342 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE747342 /FEA=EST /DB_XREF=gi:10161334 /DB_XREF=est:601580340F1 /CLONE=IMAGE:3929313 /UG=Hs.91579 Homo sapiens clone 23783 mRNA sequence </td> <td> BE747342 </td> <td> IMP4, U3 small nucleolar ribonucleoprotein </td> <td> IMP4 </td> <td> 92856 </td> <td> NM_033416 /// XM_005263844 </td> <td> 0006364 // rRNA processing // non-traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 49.15 </td> <td> 183.70 </td> <td> 2.76 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 203033_x_at </td> <td> 203033_x_at </td> <td> NM_000143 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000143.1 /DEF=Homo sapiens fumarate hydratase (FH), mRNA. /FEA=mRNA /GEN=FH /PROD=fumarate hydratase /DB_XREF=gi:4503716 /UG=Hs.75653 fumarate hydratase /FL=gb:BC003108.1 gb:M15502.1 gb:U59309.1 gb:U48857.1 gb:NM_000143.1 </td> <td> NM_000143 </td> <td> fumarate hydratase </td> <td> FH </td> <td> 2271 </td> <td> NM_000143 </td> <td> 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006106 // fumarate metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0045239 // tricarboxylic acid cycle enzyme complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004333 // fumarate hydratase activity // not recorded /// 0016829 // lyase activity // inferred from electronic annotation </td> <td> 58.88 </td> <td> 295.24 </td> <td> 2.76 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200878_at </td> <td> 200878_at </td> <td> AF052094 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF052094.1 /DEF=Homo sapiens clone 23698 mRNA sequence. /FEA=mRNA /DB_XREF=gi:3360400 /UG=Hs.8136 endothelial PAS domain protein 1 /FL=gb:U51626.1 gb:U81984.1 gb:NM_001430.1 </td> <td> AF052094 </td> <td> endothelial PAS domain protein 1 </td> <td> EPAS1 </td> <td> 2034 </td> <td> NM_001430 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from direct assay /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0042415 // norepinephrine metabolic process // inferred from electronic annotation /// 0043129 // surfactant homeostasis // inferred from electronic annotation /// 0043619 // regulation of transcription from RNA polymerase II promoter in response to oxidative stress // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048469 // cell maturation // inferred from electronic annotation /// 0048625 // myoblast fate commitment // inferred from sequence or structural similarity /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071456 // cellular response to hypoxia // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005667 // transcription factor complex // inferred from physical interaction /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // inferred from genetic interaction /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -139.50 </td> <td> 916.60 </td> <td> -2.76 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200607_s_at </td> <td> 200607_s_at </td> <td> BG289967 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG289967 /FEA=EST /DB_XREF=gi:13046289 /DB_XREF=est:602381386F1 /CLONE=IMAGE:4499085 /UG=Hs.81848 RAD21 (S. pombe) homolog /FL=gb:D38551.1 gb:NM_006265.1 </td> <td> BG289967 </td> <td> RAD21 homolog (S. pombe) </td> <td> RAD21 </td> <td> 5885 </td> <td> NM_006265 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0071168 // protein localization to chromatin // inferred from mutant phenotype </td> <td> 0000228 // nuclear chromosome // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008278 // cohesin complex // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0034991 // nuclear meiotic cohesin complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -115.22 </td> <td> 236.79 </td> <td> -2.76 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 205078_at </td> <td> 205078_at </td> <td> NM_002643 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002643.1 /DEF=Homo sapiens phosphatidylinositol glycan, class F (PIGF), mRNA. /FEA=mRNA /GEN=PIGF /PROD=phosphatidylinositol glycan, class F /DB_XREF=gi:4505796 /UG=Hs.166982 phosphatidylinositol glycan, class F /FL=gb:D13435.1 gb:NM_002643.1 </td> <td> NM_002643 </td> <td> phosphatidylinositol glycan anchor biosynthesis, class F </td> <td> PIGF </td> <td> 5281 </td> <td> NM_002643 /// NM_173074 /// XM_005264369 </td> <td> 0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from sequence or structural similarity /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004307 // ethanolaminephosphotransferase activity // traceable author statement </td> <td> 45.10 </td> <td> 123.67 </td> <td> 2.76 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202236_s_at </td> <td> 202236_s_at </td> <td> NM_003051 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003051.1 /DEF=Homo sapiens solute carrier family 16 (monocarboxylic acid transporters), member 1 (SLC16A1), mRNA.  /FEA=mRNA /GEN=SLC16A1 /PROD=solute carrier family 16 (monocarboxylic acidtransporters), member 1 /DB_XREF=gi:4506982 /UG=Hs.75231 solute carrier family 16 (monocarboxylic acid transporters), member 1 /FL=gb:NM_003051.1 gb:L31801.1 </td> <td> NM_003051 </td> <td> solute carrier family 16 (monocarboxylate transporter), member 1 </td> <td> SLC16A1 </td> <td> 6566 </td> <td> NM_001166496 /// NM_003051 </td> <td> 0006090 // pyruvate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0015728 // mevalonate transport // traceable author statement /// 0035873 // lactate transmembrane transport // inferred from electronic annotation /// 0035879 // plasma membrane lactate transport // inferred from sequence or structural similarity /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015130 // mevalonate transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0097159 // organic cyclic compound binding // inferred from electronic annotation </td> <td> 130.40 </td> <td> 539.58 </td> <td> 2.76 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 210346_s_at </td> <td> 210346_s_at </td> <td> AF212224 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF212224.1 /DEF=Homo sapiens CLK4 mRNA, complete cds. /FEA=mRNA /PROD=CLK4 /DB_XREF=gi:9437514 /UG=Hs.295231 Homo sapiens CLK4 mRNA, complete cds /FL=gb:AF212224.1 </td> <td> AF212224 </td> <td> CDC-like kinase 4 </td> <td> CLK4 </td> <td> 57396 </td> <td> NM_020666 /// XM_005265947 /// XM_005265948 /// XM_005265949 /// XM_006714895 /// XM_006714896 /// XR_427807 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -26.53 </td> <td> 79.61 </td> <td> -2.75 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200632_s_at </td> <td> 200632_s_at </td> <td> NM_006096 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006096.1 /DEF=Homo sapiens N-myc downstream regulated (NDRG1), mRNA. /FEA=mRNA /GEN=NDRG1 /PROD=N-myc downstream regulated /DB_XREF=gi:5174656 /UG=Hs.75789 N-myc downstream regulated /FL=gb:BC003175.1 gb:D87953.1 gb:AF004162.1 gb:NM_006096.1 </td> <td> NM_006096 </td> <td> N-myc downstream regulated 1 </td> <td> NDRG1 </td> <td> 10397 </td> <td> NM_001135242 /// NM_001258432 /// NM_001258433 /// NM_006096 </td> <td> 0008219 // cell death // inferred from electronic annotation /// 0010038 // response to metal ion // traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from expression pattern /// 0032287 // peripheral nervous system myelin maintenance // inferred from electronic annotation /// 0045576 // mast cell activation // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0090232 // positive regulation of spindle checkpoint // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0017137 // Rab GTPase binding // inferred from direct assay /// 0043015 // gamma-tubulin binding // inferred from direct assay /// 0045296 // cadherin binding // inferred from direct assay </td> <td> -110.80 </td> <td> 238.72 </td> <td> -2.75 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212064_x_at </td> <td> 212064_x_at </td> <td> AI471665 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI471665 /FEA=EST /DB_XREF=gi:4333755 /DB_XREF=est:tl99b10.x1 /CLONE=IMAGE:2155195 /UG=Hs.7647 MYC-associated zinc finger protein (purine-binding transcription factor) </td> <td> AI471665 </td> <td> MYC-associated zinc finger protein (purine-binding transcription factor) </td> <td> MAZ </td> <td> 4150 </td> <td> NM_001042539 /// NM_001276275 /// NM_001276276 /// NM_002383 /// NR_074080 /// XM_006721047 /// XM_006721048 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006369 // termination of RNA polymerase II transcription // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 64.33 </td> <td> 164.14 </td> <td> 2.75 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200880_at </td> <td> 200880_at </td> <td> AL534104 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL534104 /FEA=EST /DB_XREF=gi:12797597 /DB_XREF=est:AL534104 /CLONE=CS0DF005YF01 (3 prime) /UG=Hs.94 DnaJ (Hsp40) homolog, subfamily A, member 1 /FL=gb:D13388.1 gb:L08069.1 gb:NM_001539.1 </td> <td> AL534104 </td> <td> DnaJ (Hsp40) homolog, subfamily A, member 1 </td> <td> DNAJA1 </td> <td> 3301 </td> <td> NM_001539 </td> <td> 0006457 // protein folding // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043508 // negative regulation of JUN kinase activity // inferred from mutant phenotype /// 0051223 // regulation of protein transport // inferred from direct assay /// 0070585 // protein localization to mitochondrion // inferred from mutant phenotype </td> <td> 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from direct assay /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> 60.00 </td> <td> 481.10 </td> <td> 2.75 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201024_x_at </td> <td> 201024_x_at </td> <td> BG261322 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG261322 /FEA=EST /DB_XREF=gi:12771138 /DB_XREF=est:602373079F1 /CLONE=IMAGE:4484563 /UG=Hs.158688 KIAA0741 gene product /FL=gb:AB018284.1 gb:AF078035.1 gb:NM_015904.1 </td> <td> BG261322 </td> <td> eukaryotic translation initiation factor 5B </td> <td> EIF5B </td> <td> 9669 </td> <td> NM_015904 /// XM_005264075 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0006446 // regulation of translational initiation // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // non-traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 63.68 </td> <td> 274.84 </td> <td> 2.75 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200694_s_at </td> <td> 200694_s_at </td> <td> NM_020414 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020414.2 /DEF=Homo sapiens DEADH (Asp-Glu-Ala-AspHis) box polypeptide 24 (DDX24), mRNA.  /FEA=mRNA /GEN=DDX24 /PROD=DEADH (Asp-Glu-Ala-AspHis) box polypeptide 24 /DB_XREF=gi:13787212 /UG=Hs.155986 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 24 /FL=gb:AL136886.1 gb:NM_020414.2 gb:AF214731.1 </td> <td> NM_020414 </td> <td> DEAD (Asp-Glu-Ala-Asp) box helicase 24 </td> <td> DDX24 </td> <td> 57062 </td> <td> NM_020414 </td> <td> 0003351 // epithelial cilium movement // non-traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0007338 // single fertilization // traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016070 // RNA metabolic process // non-traceable author statement </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031514 // motile cilium // inferred from direct assay /// 0072372 // primary cilium // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // non-traceable author statement /// 0004004 // ATP-dependent RNA helicase activity // non-traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 55.62 </td> <td> 275.61 </td> <td> 2.75 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201522_x_at </td> <td> 201522_x_at </td> <td> NM_003097 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003097.2 /DEF=Homo sapiens small nuclear ribonucleoprotein polypeptide N (SNRPN), transcript variant 1, mRNA.  /FEA=mRNA /GEN=SNRPN /PROD=small nuclear ribonucleoprotein polypeptide N /DB_XREF=gi:13027651 /UG=Hs.48375 small nuclear ribonucleoprotein polypeptide N /FL=gb:U41303.1 gb:NM_003097.2 gb:BC003180.1 gb:J04615.1 </td> <td> NM_003097 </td> <td> small nuclear ribonucleoprotein polypeptide N /// SNRPN upstream reading frame </td> <td> SNRPN /// SNURF </td> <td> 6638 /// 8926 </td> <td> NM_003097 /// NM_005678 /// NM_022804 /// NM_022805 /// NM_022806 /// NM_022807 /// NM_022808 </td> <td> 0008380 // RNA splicing // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005685 // U1 snRNP // inferred from electronic annotation /// 0005686 // U2 snRNP // inferred from electronic annotation /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -213.20 </td> <td> 799.88 </td> <td> -2.75 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200082_s_at </td> <td> 200082_s_at </td> <td> AI805587 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI805587 /FEA=EST /DB_XREF=gi:5392153 /DB_XREF=est:tx97a02.x1 /CLONE=IMAGE:2277482 /UG=Hs.301547 ribosomal protein S7 </td> <td> AI805587 </td> <td> ribosomal protein S7 </td> <td> RPS7 </td> <td> 6201 </td> <td> NM_001011 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0002181 // cytoplasmic translation // not recorded /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030686 // 90S preribosome // not recorded /// 0032040 // small-subunit processome // not recorded /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -489.72 </td> <td> 2777.24 </td> <td> -2.75 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208698_s_at </td> <td> 208698_s_at </td> <td> L14599 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L14599.1 /DEF=Human mRNA, complete cds. /FEA=mRNA /DB_XREF=gi:348238 /UG=Hs.172207 non-POU-domain-containing, octamer-binding /FL=gb:BC002364.1 gb:U89867.1 gb:L14599.1 gb:U02493.1 </td> <td> L14599 </td> <td> non-POU domain containing, octamer-binding </td> <td> NONO </td> <td> 4841 </td> <td> NM_001145408 /// NM_001145409 /// NM_001145410 /// NM_007363 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0008380 // RNA splicing // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0048511 // rhythmic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0042382 // paraspeckles // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001047 // core promoter binding // inferred from sequence or structural similarity /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -75.12 </td> <td> 512.69 </td> <td> -2.74 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202431_s_at </td> <td> 202431_s_at </td> <td> NM_002467 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002467.1 /DEF=Homo sapiens v-myc avian myelocytomatosis viral oncogene homolog (MYC), mRNA.  /FEA=mRNA /GEN=MYC /PROD=v-myc avian myelocytomatosis viral oncogenehomolog /DB_XREF=gi:12962934 /UG=Hs.79070 v-myc avian myelocytomatosis viral oncogene homolog /FL=gb:BC000141.1 gb:BC000917.2 gb:NM_002467.1 </td> <td> NM_002467 </td> <td> v-myc avian myelocytomatosis viral oncogene homolog </td> <td> MYC </td> <td> 4609 </td> <td> NM_002467 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000165 // MAPK cascade // inferred from mutant phenotype /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0006112 // energy reserve metabolic process // non-traceable author statement /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006879 // cellular iron ion homeostasis // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0010332 // response to gamma radiation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from direct assay /// 0015671 // oxygen transport // non-traceable author statement /// 0032204 // regulation of telomere maintenance // inferred from mutant phenotype /// 0032873 // negative regulation of stress-activated MAPK cascade // inferred from sequence or structural similarity /// 0034644 // cellular response to UV // inferred from expression pattern /// 0035690 // cellular response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from expression pattern /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0044346 // fibroblast apoptotic process // traceable author statement /// 0045656 // negative regulation of monocyte differentiation // inferred from mutant phenotype /// 0045727 // positive regulation of translation // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from mutant phenotype /// 0048147 // negative regulation of fibroblast proliferation // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0051276 // chromosome organization // inferred from direct assay /// 0051782 // negative regulation of cell division // inferred from direct assay /// 0060070 // canonical Wnt signaling pathway // inferred from direct assay /// 0070848 // response to growth factor // traceable author statement /// 0090096 // positive regulation of metanephric cap mesenchymal cell proliferation // inferred from sequence or structural similarity /// 2000573 // positive regulation of DNA biosynthetic process // inferred from mutant phenotype /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005791 // rough endoplasmic reticulum // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0044195 // nucleoplasmic reticulum // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from direct assay /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction /// 0070888 // E-box binding // inferred from direct assay /// 0071074 // eukaryotic initiation factor eIF2 binding // inferred from physical interaction </td> <td> -79.93 </td> <td> 497.81 </td> <td> -2.74 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201105_at </td> <td> 201105_at </td> <td> NM_002305 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002305.2 /DEF=Homo sapiens lectin, galactoside-binding, soluble, 1 (galectin 1) (LGALS1), mRNA.  /FEA=mRNA /GEN=LGALS1 /PROD=beta-galactosidase binding lectin precursor /DB_XREF=gi:6006015 /UG=Hs.227751 lectin, galactoside-binding, soluble, 1 (galectin 1) /FL=gb:BC001693.1 gb:J04456.1 gb:NM_002305.2 </td> <td> NM_002305 </td> <td> lectin, galactoside-binding, soluble, 1 </td> <td> LGALS1 </td> <td> 3956 </td> <td> NM_002305 </td> <td> 0002317 // plasma cell differentiation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0010812 // negative regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0031295 // T cell costimulation // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from electronic annotation /// 0034120 // positive regulation of erythrocyte aggregation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0045445 // myoblast differentiation // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001948 // glycoprotein binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0016936 // galactoside binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030395 // lactose binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043236 // laminin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -979.47 </td> <td> 3995.19 </td> <td> -2.74 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 218185_s_at </td> <td> 218185_s_at </td> <td> NM_018120 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018120.1 /DEF=Homo sapiens hypothetical protein FLJ10511 (FLJ10511), mRNA. /FEA=mRNA /GEN=FLJ10511 /PROD=hypothetical protein FLJ10511 /DB_XREF=gi:8922478 /UG=Hs.106768 hypothetical protein FLJ10511 /FL=gb:NM_018120.1 </td> <td> NM_018120 </td> <td> armadillo repeat containing 1 </td> <td> ARMC1 </td> <td> 55156 </td> <td> NM_001286702 /// NM_018120 /// XM_005251264 /// XM_006716458 </td> <td> 0030001 // metal ion transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 40.02 </td> <td> 126.04 </td> <td> 2.74 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 213598_at </td> <td> 213598_at </td> <td> W87688 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W87688 /FEA=EST /DB_XREF=gi:1401813 /DB_XREF=est:zh68c03.s1 /CLONE=IMAGE:417220 /UG=Hs.125819 putative dimethyladenosine transferase </td> <td> W87688 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 31.58 </td> <td> 60.86 </td> <td> 2.74 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 204026_s_at </td> <td> 204026_s_at </td> <td> NM_007057 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007057.1 /DEF=Homo sapiens ZW10 interactor (ZWINT), mRNA. /FEA=mRNA /GEN=ZWINT /PROD=ZW10 interactor /DB_XREF=gi:6857828 /UG=Hs.42650 ZW10 interactor /FL=gb:AF067656.1 gb:NM_007057.1 </td> <td> NM_007057 </td> <td> ZW10 interacting kinetochore protein </td> <td> ZWINT </td> <td> 11130 </td> <td> NM_001005413 /// NM_001005414 /// NM_007057 /// NM_032997 /// XM_005269463 /// XR_428692 /// XR_428693 </td> <td> 0000070 // mitotic sister chromatid segregation // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // non-traceable author statement /// 0007051 // spindle organization // non-traceable author statement /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007093 // mitotic cell cycle checkpoint // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051649 // establishment of localization in cell // inferred from direct assay </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> 60.97 </td> <td> 306.56 </td> <td> 2.74 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 203312_x_at </td> <td> 203312_x_at </td> <td> NM_001663 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001663.2 /DEF=Homo sapiens ADP-ribosylation factor 6 (ARF6), mRNA. /FEA=mRNA /GEN=ARF6 /PROD=ADP-ribosylation factor 6 /DB_XREF=gi:6996000 /UG=Hs.89474 ADP-ribosylation factor 6 /FL=gb:BC002952.1 gb:M57763.1 gb:NM_001663.2 </td> <td> NM_001663 </td> <td> ADP-ribosylation factor 6 </td> <td> ARF6 </td> <td> 382 </td> <td> NM_001663 </td> <td> 0001889 // liver development // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from mutant phenotype /// 0030866 // cortical actin cytoskeleton organization // inferred from mutant phenotype /// 0031529 // ruffle organization // inferred from direct assay /// 0033028 // myeloid cell apoptotic process // inferred from electronic annotation /// 0034394 // protein localization to cell surface // inferred from sequence or structural similarity /// 0035020 // regulation of Rac protein signal transduction // inferred from direct assay /// 0036010 // protein localization to endosome // inferred from mutant phenotype /// 0048261 // negative regulation of receptor-mediated endocytosis // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051489 // regulation of filopodium assembly // inferred from direct assay /// 0060998 // regulation of dendritic spine development // inferred from sequence or structural similarity /// 0090004 // positive regulation of establishment of protein localization to plasma membrane // inferred from sequence or structural similarity /// 0090162 // establishment of epithelial cell polarity // inferred from electronic annotation /// 0097284 // hepatocyte apoptotic process // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // traceable author statement /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction </td> <td> 43.88 </td> <td> 319.59 </td> <td> 2.74 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212391_x_at </td> <td> 212391_x_at </td> <td> AI925635 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI925635 /FEA=EST /DB_XREF=gi:5661686 /DB_XREF=est:wo34f07.x1 /CLONE=IMAGE:2457253 /UG=Hs.77039 ribosomal protein S3A </td> <td> AI925635 </td> <td> ribosomal protein S3A /// small nucleolar RNA, C/D box 73A </td> <td> RPS3A /// SNORD73A </td> <td> 6189 /// 8944 </td> <td> NM_001006 /// NM_001267699 /// NR_000007 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0002181 // cytoplasmic translation // not recorded /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from mutant phenotype /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0097194 // execution phase of apoptosis // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -730.25 </td> <td> 4723.00 </td> <td> -2.74 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212124_at </td> <td> 212124_at </td> <td> AF070622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF070622.1 /DEF=Homo sapiens clone 24800 mRNA sequence. /FEA=mRNA /DB_XREF=gi:3283888 /UG=Hs.7252 KIAA1224 protein </td> <td> AF070622 </td> <td> zinc finger, MIZ-type containing 1 </td> <td> ZMIZ1 </td> <td> 57178 </td> <td> NM_020338 /// XM_005269987 /// XM_005269988 /// XM_006717923 /// XM_006717924 /// XM_006717925 </td> <td> 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007296 // vitellogenesis // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -72.20 </td> <td> 276.05 </td> <td> -2.74 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 210137_s_at </td> <td> 210137_s_at </td> <td> BC001286 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001286.1 /DEF=Homo sapiens, Similar to dCMP deaminase, clone MGC:5160, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to dCMP deaminase /DB_XREF=gi:12654884 /UG=Hs.76894 dCMP deaminase /FL=gb:BC001286.1 </td> <td> BC001286 </td> <td> dCMP deaminase </td> <td> DCTD </td> <td> 1635 </td> <td> NM_001012732 /// NM_001921 /// XM_005262778 /// XM_005262779 /// XM_005262780 /// XM_005262781 /// XM_005262782 /// XM_006714113 /// XM_006714114 /// XM_006714115 /// XM_006714116 </td> <td> 0006206 // pyrimidine nucleobase metabolic process // traceable author statement /// 0006220 // pyrimidine nucleotide metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004132 // dCMP deaminase activity // not recorded /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 76.23 </td> <td> 223.61 </td> <td> 2.74 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212528_at </td> <td> 212528_at </td> <td> AI348009 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI348009 /FEA=EST /DB_XREF=gi:4085215 /DB_XREF=est:qp61b09.x1 /CLONE=IMAGE:1927481 /UG=Hs.12421 hypothetical protein </td> <td> AI348009 </td> <td> desumoylating isopeptidase 1 </td> <td> DESI1 </td> <td> 27351 </td> <td> NM_015704 /// XM_005261571 </td> <td> 0006508 // proteolysis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> 39.95 </td> <td> 89.25 </td> <td> 2.73 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 207629_s_at </td> <td> 207629_s_at </td> <td> NM_004723 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004723.1 /DEF=Homo sapiens rhorac guanine nucleotide exchange factor (GEF) 2 (ARHGEF2), mRNA.  /FEA=mRNA /GEN=ARHGEF2 /PROD=rhorac guanine nucleotide exchange factor (GEF)2 /DB_XREF=gi:4758671 /UG=Hs.155120 rhorac guanine nucleotide exchange factor (GEF) 2 /FL=gb:U72206.1 gb:NM_004723.1 </td> <td> NM_004723 </td> <td> Rho/Rac guanine nucleotide exchange factor (GEF) 2 </td> <td> ARHGEF2 </td> <td> 9181 </td> <td> NM_001162383 /// NM_001162384 /// NM_004723 /// XM_005245587 /// XM_005245588 /// XM_005245589 /// XM_005245590 /// XM_005245591 /// XM_005245592 /// XM_005245593 /// XM_005245594 /// XM_005245595 /// XM_006711622 /// XM_006711623 /// XM_006711624 /// XM_006711625 /// XM_006711626 </td> <td> 0000132 // establishment of mitotic spindle orientation // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from mutant phenotype /// 0002376 // immune system process // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0007015 // actin filament organization // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0032314 // regulation of Rac GTPase activity // inferred from direct assay /// 0032319 // regulation of Rho GTPase activity // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from direct assay /// 0032855 // positive regulation of Rac GTPase activity // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // non-traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0060546 // negative regulation of necroptotic process // inferred from sequence or structural similarity /// 0060547 // negative regulation of necrotic cell death // inferred from sequence or structural similarity /// 0071225 // cellular response to muramyl dipeptide // inferred from direct assay /// 0071356 // cellular response to tumor necrosis factor // inferred from sequence or structural similarity /// 0071474 // cellular hyperosmotic response // inferred from sequence or structural similarity /// 0097190 // apoptotic signaling pathway // traceable author statement /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from sequence or structural similarity /// 1902219 // negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from direct assay /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // non-traceable author statement /// 0017048 // Rho GTPase binding // inferred from direct assay /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048365 // Rac GTPase binding // inferred from direct assay </td> <td> -59.90 </td> <td> 104.97 </td> <td> -2.73 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201252_at </td> <td> 201252_at </td> <td> NM_006503 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006503.1 /DEF=Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4 (PSMC4), mRNA.  /FEA=mRNA /GEN=PSMC4 /PROD=proteasome (prosome, macropain) 26S subunit,ATPase, 4 /DB_XREF=gi:5729990 /UG=Hs.211594 proteasome (prosome, macropain) 26S subunit, ATPase, 4 /FL=gb:BC000343.1 gb:AF038965.1 gb:AF020736.1 gb:U27515.1 gb:NM_006503.1 </td> <td> NM_006503 </td> <td> proteasome (prosome, macropain) 26S subunit, ATPase, 4 </td> <td> PSMC4 </td> <td> 5704 </td> <td> NM_006503 /// NM_153001 /// XR_430205 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001824 // blastocyst development // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006200 // ATP catabolic process // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016234 // inclusion body // inferred from electronic annotation /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity /// 0031597 // cytosolic proteasome complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0009378 // four-way junction helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // traceable author statement /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> 64.45 </td> <td> 145.88 </td> <td> 2.73 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 205327_s_at </td> <td> 205327_s_at </td> <td> NM_001616 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001616.2 /DEF=Homo sapiens activin A receptor, type II (ACVR2), mRNA. /FEA=mRNA /GEN=ACVR2 /PROD=activin A type II receptor precursor /DB_XREF=gi:10862696 /UG=Hs.26014 activin A receptor, type II /FL=gb:NM_001616.2 gb:D31770.1 </td> <td> NM_001616 </td> <td> activin A receptor, type IIA </td> <td> ACVR2A </td> <td> 92 </td> <td> NM_001278579 /// NM_001278580 /// NM_001616 /// XM_005263843 </td> <td> 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // traceable author statement /// 0030510 // regulation of BMP signaling pathway // inferred from electronic annotation /// 0032924 // activin receptor signaling pathway // inferred from direct assay /// 0032927 // positive regulation of activin receptor signaling pathway // inferred from direct assay /// 0042713 // sperm ejaculation // inferred from electronic annotation /// 0043084 // penile erection // inferred from electronic annotation /// 0045648 // positive regulation of erythrocyte differentiation // inferred from direct assay /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0050999 // regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0060011 // Sertoli cell proliferation // inferred from electronic annotation /// 0071773 // cellular response to BMP stimulus // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0034673 // inhibin-betaglycan-ActRII complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // traceable author statement /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015026 // coreceptor activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017002 // activin-activated receptor activity // inferred from direct assay /// 0019838 // growth factor binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0034711 // inhibin binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048185 // activin binding // inferred from physical interaction </td> <td> -42.60 </td> <td> 93.85 </td> <td> -2.73 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 219243_at </td> <td> 219243_at </td> <td> NM_018326 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018326.1 /DEF=Homo sapiens hypothetical protein FLJ11110 (FLJ11110), mRNA. /FEA=mRNA /GEN=FLJ11110 /PROD=hypothetical protein FLJ11110 /DB_XREF=gi:8922872 /UG=Hs.30822 hypothetical protein FLJ11110 /FL=gb:NM_018326.1 </td> <td> NM_018326 </td> <td> GTPase, IMAP family member 4 </td> <td> GIMAP4 </td> <td> 55303 </td> <td> NM_018326 /// XM_005250017 /// XM_005250018 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 104.30 </td> <td> 191.07 </td> <td> 2.73 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 211318_s_at </td> <td> 211318_s_at </td> <td> U85943 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U85943.1 /DEF=Homo sapiens mRNA-associated protein mrnp41 mRNA, complete cds. /FEA=mRNA /PROD=mRNA-associated protein mrnp41 /DB_XREF=gi:2231591 /UG=Hs.196209 RAE1 (RNA export 1, S.pombe) homolog /FL=gb:U85943.1 </td> <td> U85943 </td> <td> ribonucleic acid export 1 </td> <td> RAE1 </td> <td> 8480 </td> <td> NM_001015885 /// NM_003610 /// XM_005260582 /// XM_005260583 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005640 // nuclear outer membrane // traceable author statement /// 0005643 // nuclear pore // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement </td> <td> 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from sequence or structural similarity </td> <td> 27.77 </td> <td> 180.76 </td> <td> 2.73 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 205680_at </td> <td> 205680_at </td> <td> NM_002425 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002425.1 /DEF=Homo sapiens matrix metalloproteinase 10 (stromelysin 2) (MMP10), mRNA.  /FEA=mRNA /GEN=MMP10 /PROD=matrix metalloproteinase 10 preproprotein /DB_XREF=gi:4505204 /UG=Hs.2258 matrix metalloproteinase 10 (stromelysin 2) /FL=gb:BC002591.1 gb:NM_002425.1 </td> <td> NM_002425 </td> <td> matrix metallopeptidase 10 (stromelysin 2) </td> <td> MMP10 </td> <td> 4319 </td> <td> NM_002425 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0030574 // collagen catabolic process // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation </td> <td> 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -176.32 </td> <td> 381.41 </td> <td> -2.73 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 214390_s_at </td> <td> 214390_s_at </td> <td> AI652662 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI652662 /FEA=EST /DB_XREF=gi:4736641 /DB_XREF=est:wb30c12.x1 /CLONE=IMAGE:2307190 /UG=Hs.157205 branched chain aminotransferase 1, cytosolic </td> <td> AI652662 </td> <td> branched chain amino-acid transaminase 1, cytosolic </td> <td> BCAT1 </td> <td> 586 </td> <td> NM_001178091 /// NM_001178092 /// NM_001178093 /// NM_001178094 /// NM_005504 /// XM_005253460 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009081 // branched-chain amino acid metabolic process // inferred from electronic annotation /// 0009082 // branched-chain amino acid biosynthetic process // inferred from electronic annotation /// 0009083 // branched-chain amino acid catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004084 // branched-chain-amino-acid transaminase activity // not recorded /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0052654 // L-leucine transaminase activity // inferred from electronic annotation /// 0052655 // L-valine transaminase activity // inferred from electronic annotation /// 0052656 // L-isoleucine transaminase activity // inferred from electronic annotation </td> <td> -62.85 </td> <td> 266.00 </td> <td> -2.73 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 213165_at </td> <td> 213165_at </td> <td> AI041204 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI041204 /FEA=EST /DB_XREF=gi:3280398 /DB_XREF=est:ov77g06.x1 /CLONE=IMAGE:1643386 /UG=Hs.323748 Homo sapiens clone CDABP0086 mRNA sequence </td> <td> AI041204 </td> <td> centrosomal protein 350kDa </td> <td> CEP350 </td> <td> 9857 </td> <td> NM_014810 /// XM_005245638 /// XM_006711666 /// XM_006711667 /// XM_006711668 /// XM_006711669 /// XM_006711670 /// XM_006711671 </td> <td> 0034453 // microtubule anchoring // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0008017 // microtubule binding // inferred from electronic annotation </td> <td> -38.10 </td> <td> 115.28 </td> <td> -2.73 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201160_s_at </td> <td> 201160_s_at </td> <td> AL556190 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL556190 /FEA=EST /DB_XREF=gi:12898634 /DB_XREF=est:AL556190 /CLONE=CS0DK011YH09 (5 prime) /UG=Hs.1139 cold shock domain protein A /FL=gb:NM_003651.1 </td> <td> AL556190 </td> <td> Y box binding protein 3 </td> <td> YBX3 </td> <td> 8531 </td> <td> NM_001145426 /// NM_003651 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009409 // response to cold // traceable author statement /// 0009566 // fertilization // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048642 // negative regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0060546 // negative regulation of necroptotic process // inferred from mutant phenotype /// 0060547 // negative regulation of necrotic cell death // inferred from mutant phenotype /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred by curator /// 0071356 // cellular response to tumor necrosis factor // inferred from mutant phenotype /// 0071474 // cellular hyperosmotic response // inferred from mutant phenotype /// 1902219 // negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress // inferred from mutant phenotype /// 2000767 // positive regulation of cytoplasmic translation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005844 // polysome // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from sequence or structural similarity /// 0017048 // Rho GTPase binding // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -214.22 </td> <td> 1513.94 </td> <td> -2.73 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208768_x_at </td> <td> 208768_x_at </td> <td> D17652 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D17652.1 /DEF=Human mRNA for HBp15L22, complete cds. /FEA=mRNA /PROD=HBp15L22 /DB_XREF=gi:409069 /UG=Hs.99914 ribosomal protein L22 /FL=gb:D17652.1 </td> <td> D17652 </td> <td> ribosomal protein L22 </td> <td> RPL22 </td> <td> 6146 </td> <td> NM_000983 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -595.22 </td> <td> 2811.01 </td> <td> -2.73 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208761_s_at </td> <td> 208761_s_at </td> <td> U67122 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U67122.1 /DEF=Human ubiquitin-related protein SUMO-1 mRNA, complete cds. /FEA=mRNA /PROD=SUMO-1 /DB_XREF=gi:1762972 /UG=Hs.81424 ubiquitin-like 1 (sentrin) /FL=gb:U61397.1 gb:U38784.1 gb:U72722.1 gb:U67122.1 gb:U83117.1 gb:NM_003352.1 </td> <td> U67122 </td> <td> small ubiquitin-like modifier 1 </td> <td> SUMO1 </td> <td> 7341 </td> <td> NM_001005781 /// NM_001005782 /// NM_003352 </td> <td> 0006281 // DNA repair // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030578 // PML body organization // inferred from electronic annotation /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0032880 // regulation of protein localization // traceable author statement /// 0043392 // negative regulation of DNA binding // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement /// 0090204 // protein localization to nuclear pore // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 69.63 </td> <td> 354.64 </td> <td> 2.72 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208289_s_at </td> <td> 208289_s_at </td> <td> NM_004879 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004879.2 /DEF=Homo sapiens etoposide-induced mRNA (PIG8), mRNA. /FEA=mRNA /GEN=PIG8 /PROD=etoposide-induced mRNA /DB_XREF=gi:6631103 /UG=Hs.286027 etoposide-induced mRNA /FL=gb:NM_004879.2 </td> <td> NM_004879 </td> <td> etoposide induced 2.4 </td> <td> EI24 </td> <td> 9538 </td> <td> NM_001007277 /// NM_001290135 /// NM_004879 /// NR_110769 /// NR_110770 </td> <td> 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td>  </td> <td> 38.10 </td> <td> 150.95 </td> <td> 2.72 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201785_at </td> <td> 201785_at </td> <td> NM_002933 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002933.1 /DEF=Homo sapiens ribonuclease, RNase A family, 1 (pancreatic) (RNASE1), mRNA.  /FEA=mRNA /GEN=RNASE1 /PROD=ribonuclease, RNase A family, 1 (pancreatic) /DB_XREF=gi:4506546 /UG=Hs.78224 ribonuclease, RNase A family, 1 (pancreatic) /FL=gb:BC005324.1 gb:NM_002933.1 gb:D26129.1 </td> <td> NM_002933 </td> <td> ribonuclease, RNase A family, 1 (pancreatic) </td> <td> RNASE1 </td> <td> 6035 </td> <td> NM_002933 /// NM_198232 /// NM_198234 /// NM_198235 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004522 // pancreatic ribonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016892 // endoribonuclease activity, producing 3'-phosphomonoesters // inferred from electronic annotation </td> <td> 104.65 </td> <td> 252.88 </td> <td> 2.72 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 204806_x_at </td> <td> 204806_x_at </td> <td> NM_018950 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018950.1 /DEF=Homo sapiens major histocompatibility complex, class I, F (HLA-F), mRNA.  /FEA=mRNA /GEN=HLA-F /PROD=major histocompatibility complex, class I, F /DB_XREF=gi:9665231 /UG=Hs.110309 major histocompatibility complex, class I, F /FL=gb:NM_018950.1 </td> <td> NM_018950 </td> <td> major histocompatibility complex, class I, F </td> <td> HLA-F </td> <td> 3134 </td> <td> NM_001098478 /// NM_001098479 /// NM_018950 /// XM_005249054 /// XM_005272809 /// XM_005274960 /// XM_005275115 /// XM_005275390 /// XM_005275547 /// XM_005275548 /// XM_006726089 /// XM_006726090 /// XM_006726091 /// XM_006726092 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005102 // receptor binding // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0042605 // peptide antigen binding // not recorded /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046979 // TAP2 binding // inferred from physical interaction </td> <td> -100.38 </td> <td> 231.69 </td> <td> -2.72 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212578_x_at </td> <td> 212578_x_at </td> <td> BF026595 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF026595 /FEA=EST /DB_XREF=gi:10734307 /DB_XREF=est:601672736F1 /CLONE=IMAGE:3955617 /UG=Hs.5174 ribosomal protein S17 </td> <td> BF026595 </td> <td> ribosomal protein S17 </td> <td> RPS17 </td> <td> 6218 </td> <td> NM_001021 /// NM_001199057 /// NR_111943 /// NR_111944 </td> <td> 0000028 // ribosomal small subunit assembly // not recorded /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // non-traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // not recorded /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0034101 // erythrocyte homeostasis // inferred from mutant phenotype /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // not recorded /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -444.77 </td> <td> 2574.71 </td> <td> -2.72 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 204166_at </td> <td> 204166_at </td> <td> NM_014963 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014963.1 /DEF=Homo sapiens KIAA0963 protein (KIAA0963), mRNA. /FEA=mRNA /GEN=KIAA0963 /PROD=KIAA0963 protein /DB_XREF=gi:7662409 /UG=Hs.7724 KIAA0963 protein /FL=gb:AB023180.1 gb:NM_014963.1 </td> <td> NM_014963 </td> <td> strawberry notch homolog 2 (Drosophila) </td> <td> SBNO2 </td> <td> 22904 </td> <td> NM_001100122 /// NM_014963 /// XM_005259519 /// XM_005259520 </td> <td> 0002281 // macrophage activation involved in immune response // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0050727 // regulation of inflammatory response // inferred from mutant phenotype </td> <td>  </td> <td>  </td> <td> -80.47 </td> <td> 69.41 </td> <td> -2.72 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 202153_s_at </td> <td> 202153_s_at </td> <td> NM_016553 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016553.1 /DEF=Homo sapiens hypothetical protein (DKFZp547L134), mRNA. /FEA=mRNA /GEN=DKFZp547L134 /PROD=hypothetical protein /DB_XREF=gi:7705354 /UG=Hs.9877 hypothetical protein /FL=gb:AL162061.1 gb:NM_016553.1 </td> <td> NM_016553 </td> <td> nucleoporin 62kDa </td> <td> NUP62 </td> <td> 23636 </td> <td> NM_001193357 /// NM_012346 /// NM_016553 /// NM_153718 /// NM_153719 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // non-traceable author statement /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007166 // cell surface receptor signaling pathway // inferred from sequence or structural similarity /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0007569 // cell aging // inferred from electronic annotation /// 0008219 // cell death // inferred from mutant phenotype /// 0008219 // cell death // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008645 // hexose transport // traceable author statement /// 0009755 // hormone-mediated signaling pathway // non-traceable author statement /// 0009966 // regulation of signal transduction // non-traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043069 // negative regulation of programmed cell death // inferred from direct assay /// 0043069 // negative regulation of programmed cell death // inferred from sequence or structural similarity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045742 // positive regulation of epidermal growth factor receptor signaling pathway // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0046578 // regulation of Ras protein signal transduction // non-traceable author statement /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // inferred from sequence or structural similarity /// 0005737 // cytoplasm // non-traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0031074 // nucleocytoplasmic shuttling complex // non-traceable author statement /// 0031965 // nuclear membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0046930 // pore complex // non-traceable author statement </td> <td> 0003682 // chromatin binding // non-traceable author statement /// 0005487 // nucleocytoplasmic transporter activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017056 // structural constituent of nuclear pore // inferred from electronic annotation /// 0030159 // receptor signaling complex scaffold activity // inferred from direct assay /// 0030159 // receptor signaling complex scaffold activity // inferred from sequence or structural similarity /// 0042169 // SH2 domain binding // inferred from direct assay /// 0042169 // SH2 domain binding // inferred from sequence or structural similarity /// 0043130 // ubiquitin binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from sequence or structural similarity /// 0046966 // thyroid hormone receptor binding // inferred from physical interaction /// 0046966 // thyroid hormone receptor binding // inferred from sequence or structural similarity /// 0051425 // PTB domain binding // inferred from electronic annotation </td> <td> 64.88 </td> <td> 203.49 </td> <td> 2.72 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 203227_s_at </td> <td> 203227_s_at </td> <td> NM_005981 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005981.1 /DEF=Homo sapiens sarcoma amplified sequence (SAS), mRNA. /FEA=mRNA /GEN=SAS /PROD=sarcoma amplified sequence /DB_XREF=gi:5174666 /UG=Hs.50984 sarcoma amplified sequence /FL=gb:U01160.1 gb:NM_005981.1 </td> <td> NM_005981 </td> <td> tetraspanin 31 </td> <td> TSPAN31 </td> <td> 6302 </td> <td> NM_005981 /// XM_005269074 </td> <td> 0008284 // positive regulation of cell proliferation // traceable author statement </td> <td> 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 32.90 </td> <td> 73.58 </td> <td> 2.72 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 217800_s_at </td> <td> 217800_s_at </td> <td> NM_030571 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030571.1 /DEF=Homo sapiens hypothetical protein MGC10924 similar to Nedd4 WW-binding protein 5 (MGC10924), mRNA.  /FEA=mRNA /GEN=MGC10924 /PROD=hypothetical protein MGC10924 similar to Nedd4WW-binding protein 5 /DB_XREF=gi:13386479 /UG=Hs.9788 hypothetical protein MGC10924 similar to Nedd4 WW-binding protein 5 /FL=gb:BC004317.1 gb:NM_030571.1 </td> <td> NM_030571 </td> <td> Nedd4 family interacting protein 1 </td> <td> NDFIP1 </td> <td> 80762 </td> <td> NM_030571 </td> <td> 0002761 // regulation of myeloid leukocyte differentiation // inferred from electronic annotation /// 0002829 // negative regulation of type 2 immune response // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from mutant phenotype /// 0031398 // positive regulation of protein ubiquitination // inferred from mutant phenotype /// 0032410 // negative regulation of transporter activity // inferred from mutant phenotype /// 0032713 // negative regulation of interleukin-4 production // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043162 // ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway // inferred from electronic annotation /// 0045619 // regulation of lymphocyte differentiation // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0048294 // negative regulation of isotype switching to IgE isotypes // inferred from electronic annotation /// 0048302 // regulation of isotype switching to IgG isotypes // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0051224 // negative regulation of protein transport // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0050699 // WW domain binding // inferred from electronic annotation </td> <td> 69.30 </td> <td> 299.62 </td> <td> 2.72 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208686_s_at </td> <td> 208686_s_at </td> <td> D42040 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D42040.1 /DEF=Human mRNA for KIAA9001 gene, complete cds. /FEA=mRNA /GEN=KIAA9001 /DB_XREF=gi:577292 /UG=Hs.75243 bromodomain-containing 2 /FL=gb:NM_005104.2 gb:M80613.1 gb:D42040.1 </td> <td> D42040 </td> <td> bromodomain containing 2 </td> <td> BRD2 </td> <td> 6046 </td> <td> NM_001113182 /// NM_001199455 /// NM_001199456 /// NM_001291986 /// NM_005104 /// NR_037625 /// XR_241911 /// XR_246967 /// XR_247375 /// XR_247406 /// XR_247427 </td> <td> 0006334 // nucleosome assembly // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0007283 // spermatogenesis // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0070577 // lysine-acetylated histone binding // inferred from direct assay </td> <td> -58.72 </td> <td> 154.64 </td> <td> -2.72 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201361_at </td> <td> 201361_at </td> <td> NM_024092 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024092.1 /DEF=Homo sapiens hypothetical protein MGC5508 (MGC5508), mRNA. /FEA=mRNA /GEN=MGC5508 /PROD=hypothetical protein MGC5508 /DB_XREF=gi:13129091 /UG=Hs.13662 hypothetical protein MGC5508 /FL=gb:BC001309.1 gb:NM_024092.1 </td> <td> NM_024092 </td> <td> transmembrane protein 109 </td> <td> TMEM109 </td> <td> 79073 </td> <td> NM_024092 </td> <td> 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from mutant phenotype /// 0071480 // cellular response to gamma radiation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 73.48 </td> <td> 297.24 </td> <td> 2.72 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201097_s_at </td> <td> 201097_s_at </td> <td> NM_001660 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001660.2 /DEF=Homo sapiens ADP-ribosylation factor 4 (ARF4), mRNA. /FEA=mRNA /GEN=ARF4 /PROD=ADP-ribosylation factor 4 /DB_XREF=gi:6995998 /UG=Hs.75290 ADP-ribosylation factor 4 /FL=gb:BC003364.1 gb:M36341.1 gb:NM_001660.2 </td> <td> NM_001660 </td> <td> ADP-ribosylation factor 4 </td> <td> ARF4 </td> <td> 378 </td> <td> NM_001660 </td> <td> 0006471 // protein ADP-ribosylation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0031584 // activation of phospholipase D activity // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048678 // response to axon injury // inferred from electronic annotation /// 2000377 // regulation of reactive oxygen species metabolic process // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation </td> <td> 191.90 </td> <td> 1546.88 </td> <td> 2.71 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 206686_at </td> <td> 206686_at </td> <td> NM_002610 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002610.2 /DEF=Homo sapiens pyruvate dehydrogenase kinase, isoenzyme 1 (PDK1), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=PDK1 /PROD=pyruvate dehydrogenase kinase, isoenzyme 1 /DB_XREF=gi:7108358 /UG=Hs.61712 pyruvate dehydrogenase kinase, isoenzyme 1 /FL=gb:L42450.1 gb:NM_002610.2 </td> <td> NM_002610 </td> <td> pyruvate dehydrogenase kinase, isozyme 1 </td> <td> PDK1 </td> <td> 5163 </td> <td> NM_001278549 /// NM_002610 /// NR_103729 /// NR_103731 /// XM_006712594 /// XM_006712595 /// XR_427093 /// XR_427094 /// XR_427095 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0008631 // intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from mutant phenotype /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0010906 // regulation of glucose metabolic process // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0097411 // hypoxia-inducible factor-1alpha signaling pathway // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0005967 // mitochondrial pyruvate dehydrogenase complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // inferred from direct assay /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -29.93 </td> <td> 21.66 </td> <td> -2.71 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 209009_at </td> <td> 209009_at </td> <td> BC001169 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001169.1 /DEF=Homo sapiens, Similar to esterase 10, clone MGC:1873, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to esterase 10 /DB_XREF=gi:12654662 /UG=Hs.82193 esterase Dformylglutathione hydrolase /FL=gb:BC001169.1 gb:AF112219.1 </td> <td> BC001169 </td> <td> esterase D </td> <td> ESD </td> <td> 2098 </td> <td> NM_001984 /// XM_005266278 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0046294 // formaldehyde catabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from direct assay /// 0018738 // S-formylglutathione hydrolase activity // inferred from electronic annotation /// 0047374 // methylumbelliferyl-acetate deacetylase activity // inferred from electronic annotation /// 0052689 // carboxylic ester hydrolase activity // non-traceable author statement </td> <td> 99.67 </td> <td> 414.31 </td> <td> 2.71 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208991_at </td> <td> 208991_at </td> <td> AA634272 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA634272 /FEA=EST /DB_XREF=gi:2557486 /DB_XREF=est:ac75h05.s1 /CLONE=IMAGE:868473 /UG=Hs.321677 signal transducer and activator of transcription 3 (acute-phase response factor) /FL=gb:BC000627.1 gb:NM_003150.1 gb:L29277.1 </td> <td> AA634272 </td> <td> signal transducer and activator of transcription 3 (acute-phase response factor) </td> <td> STAT3 </td> <td> 6774 </td> <td> NM_003150 /// NM_139276 /// NM_213662 /// XM_005257616 /// XM_005257617 /// XM_005257618 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001659 // temperature homeostasis // inferred from sequence or structural similarity /// 0001754 // eye photoreceptor cell differentiation // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006953 // acute-phase response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007259 // JAK-STAT cascade // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // non-traceable author statement /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0019953 // sexual reproduction // inferred from sequence or structural similarity /// 0030522 // intracellular receptor signaling pathway // inferred from direct assay /// 0032355 // response to estradiol // inferred from direct assay /// 0032870 // cellular response to hormone stimulus // inferred from direct assay /// 0034097 // response to cytokine // inferred from electronic annotation /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042755 // eating behavior // inferred from sequence or structural similarity /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048708 // astrocyte differentiation // inferred from sequence or structural similarity /// 0060019 // radial glial cell differentiation // inferred from sequence or structural similarity /// 0060396 // growth hormone receptor signaling pathway // inferred from direct assay /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // inferred from direct assay /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // inferred from sequence or structural similarity /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0070102 // interleukin-6-mediated signaling pathway // inferred from direct assay /// 2001223 // negative regulation of neuron migration // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0031730 // CCR5 chemokine receptor binding // inferred from electronic annotation /// 0035259 // glucocorticoid receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046983 // protein dimerization activity // inferred from sequence or structural similarity </td> <td> 94.40 </td> <td> 446.73 </td> <td> 2.71 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 208915_s_at </td> <td> 208915_s_at </td> <td> AF190863 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF190863.1 /DEF=Homo sapiens ADP-ribosylation factor binding protein GGA2 (GGA2) mRNA, complete cds.  /FEA=mRNA /GEN=GGA2 /PROD=ADP-ribosylation factor binding protein GGA2 /DB_XREF=gi:6179913 /UG=Hs.155546 KIAA1080 protein; Golgi-associated, gamma-adaptin ear containing, ARF-binding protein 2 /FL=gb:AF190863.1 gb:AF233522.1 gb:AF165531.1 gb:NM_015044.1 </td> <td> AF190863 </td> <td> golgi-associated, gamma adaptin ear containing, ARF binding protein 2 </td> <td> GGA2 </td> <td> 23062 </td> <td> NM_015044 /// XR_429674 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030306 // ADP-ribosylation factor binding // inferred from direct assay </td> <td> 50.30 </td> <td> 114.97 </td> <td> 2.71 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 212375_at </td> <td> 212375_at </td> <td> AL563727 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL563727 /FEA=EST /DB_XREF=gi:12913403 /DB_XREF=est:AL563727 /CLONE=CS0DD007YL16 (3 prime) /UG=Hs.306094 trinucleotide repeat containing 12 </td> <td> AL563727 </td> <td> E1A binding protein p400 </td> <td> EP400 </td> <td> 57634 </td> <td> NM_015409 </td> <td> 0006325 // chromatin organization // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0043968 // histone H2A acetylation // inferred from direct assay </td> <td> 0000812 // Swr1 complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from sequence or structural similarity /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 31.60 </td> <td> 77.20 </td> <td> 2.71 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 219048_at </td> <td> 219048_at </td> <td> NM_012327 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012327.1 /DEF=Homo sapiens phosphatidylinositol glycan, class N (PIGN), mRNA. /FEA=mRNA /GEN=PIGN /PROD=phosphatidylinositol glycan, class N /DB_XREF=gi:6912499 /UG=Hs.108787 phosphatidylinositol glycan, class N /FL=gb:AF109219.1 gb:NM_012327.1 </td> <td> NM_012327 </td> <td> phosphatidylinositol glycan anchor biosynthesis, class N </td> <td> PIGN </td> <td> 23556 </td> <td> NM_012327 /// NM_176787 </td> <td> 0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 26.55 </td> <td> 30.52 </td> <td> 2.70 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 201274_at </td> <td> 201274_at </td> <td> NM_002790 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002790.1 /DEF=Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 5 (PSMA5), mRNA.  /FEA=mRNA /GEN=PSMA5 /PROD=proteasome (prosome, macropain) subunit, alphatype, 5 /DB_XREF=gi:4506186 /UG=Hs.76913 proteasome (prosome, macropain) subunit, alpha type, 5 /FL=gb:NM_002790.1 </td> <td> NM_002790 </td> <td> proteasome (prosome, macropain) subunit, alpha type, 5 </td> <td> PSMA5 </td> <td> 5686 </td> <td> NM_001199772 /// NM_001199773 /// NM_001199774 /// NM_002790 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -48.35 </td> <td> 507.98 </td> <td> -2.70 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 211964_at </td> <td> 211964_at </td> <td> X05610 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X05610.1 /DEF=Human mRNA for type IV collagen alpha (2) chain. /FEA=mRNA /PROD=alpha (2) chain /DB_XREF=gi:29550 /UG=Hs.75617 collagen, type IV, alpha 2 </td> <td> X05610 </td> <td> collagen, type IV, alpha 2 </td> <td> COL4A2 </td> <td> 1284 </td> <td> NM_001846 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // non-traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // traceable author statement /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005587 // collagen type IV trimer // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005201 // extracellular matrix structural constituent // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -252.92 </td> <td> 1430.11 </td> <td> -2.70 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 209277_at </td> <td> 209277_at </td> <td> AL574096 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL574096 /FEA=EST /DB_XREF=gi:12933969 /DB_XREF=est:AL574096 /CLONE=CS0DI040YI17 (3 prime) /UG=Hs.295944 tissue factor pathway inhibitor 2 /FL=gb:BC005330.1 gb:L27624.1 gb:D29992.1 gb:NM_006528.1 </td> <td> AL574096 </td> <td> tissue factor pathway inhibitor 2 </td> <td> TFPI2 </td> <td> 7980 </td> <td> NM_001271003 /// NM_001271004 /// NM_006528 </td> <td> 0006184 // GTP catabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0007602 // phototransduction // inferred from electronic annotation /// 0007603 // phototransduction, visible light // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0042462 // eye photoreceptor cell development // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation </td> <td> 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0097381 // photoreceptor disc membrane // traceable author statement </td> <td> 0003924 // GTPase activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> 204.27 </td> <td> 368.26 </td> <td> 2.70 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 200866_s_at </td> <td> 200866_s_at </td> <td> M32221 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M32221.1 /DEF=Human saposin proteins A-D mRNA, complete cds. /FEA=mRNA /GEN=PSAP /DB_XREF=gi:337761 /UG=Hs.78575 prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) /FL=gb:NM_002778.1 gb:BC004275.1 gb:J03077.1 gb:D00422.1 gb:M60255.1 gb:M32221.1 gb:M60257.1 gb:M60258.1 gb:M81355.1 </td> <td> M32221 </td> <td> prosaposin </td> <td> PSAP </td> <td> 5660 </td> <td> NM_001042465 /// NM_001042466 /// NM_002778 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0006869 // lipid transport // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0019216 // regulation of lipid metabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0043408 // regulation of MAPK cascade // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048589 // developmental growth // inferred from electronic annotation /// 0060736 // prostate gland growth // inferred from electronic annotation /// 0060742 // epithelial cell differentiation involved in prostate gland development // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016021 // integral component of membrane // traceable author statement /// 0043202 // lysosomal lumen // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // traceable author statement /// 0008289 // lipid binding // traceable author statement </td> <td> -186.90 </td> <td> 854.77 </td> <td> -2.70 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 210145_at </td> <td> 210145_at </td> <td> M68874 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M68874.1 /DEF=Homo sapiens phosphatidylcholine 2-acylhydrolase (cPLA2) mRNA, complete cds.  /FEA=mRNA /GEN=cPLA2 /PROD=phosphatidylcholine 2-acylhydrolase /DB_XREF=gi:190003 /UG=Hs.211587 phospholipase A2, group IVA (cytosolic, calcium-dependent) /FL=gb:M68874.1 gb:M72393.1 </td> <td> M68874 </td> <td> phospholipase A2, group IVA (cytosolic, calcium-dependent) </td> <td> PLA2G4A </td> <td> 5321 </td> <td> NM_024420 /// XM_005245267 /// XM_005245268 /// XR_426785 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006654 // phosphatidic acid biosynthetic process // traceable author statement /// 0006663 // platelet activating factor biosynthetic process // non-traceable author statement /// 0006690 // icosanoid metabolic process // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019369 // arachidonic acid metabolic process // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0035965 // cardiolipin acyl-chain remodeling // traceable author statement /// 0036148 // phosphatidylglycerol acyl-chain remodeling // traceable author statement /// 0036149 // phosphatidylinositol acyl-chain remodeling // traceable author statement /// 0036150 // phosphatidylserine acyl-chain remodeling // traceable author statement /// 0036151 // phosphatidylcholine acyl-chain remodeling // traceable author statement /// 0036152 // phosphatidylethanolamine acyl-chain remodeling // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046456 // icosanoid biosynthetic process // inferred from electronic annotation /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement /// 0050482 // arachidonic acid secretion // inferred from electronic annotation /// 0071236 // cellular response to antibiotic // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0004620 // phospholipase activity // inferred from electronic annotation /// 0004622 // lysophospholipase activity // inferred from electronic annotation /// 0004623 // phospholipase A2 activity // inferred from direct assay /// 0004623 // phospholipase A2 activity // non-traceable author statement /// 0004623 // phospholipase A2 activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047498 // calcium-dependent phospholipase A2 activity // not recorded </td> <td> -58.60 </td> <td> 263.68 </td> <td> -2.70 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.51 </td> </tr>
  <tr> <td> 211554_s_at </td> <td> 211554_s_at </td> <td> AF149794 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF149794.1 /DEF=Homo sapiens apoptotic protease activating factor 1 (APAF1) mRNA, complete cds.  /FEA=CDS /GEN=APAF1 /PROD=apoptotic protease activating factor 1 /DB_XREF=gi:4929486 /UG=Hs.77579 apoptotic protease activating factor /FL=gb:AF248734.1 gb:AF149794.1 </td> <td> AF149794 </td> <td> apoptotic peptidase activating factor 1 </td> <td> APAF1 </td> <td> 317 </td> <td> NM_001160 /// NM_013229 /// NM_181861 /// NM_181868 /// NM_181869 /// XR_429095 </td> <td> 0001843 // neural tube closure // inferred from electronic annotation /// 0006309 // apoptotic DNA fragmentation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006952 // defense response // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // inferred from direct assay /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // traceable author statement /// 0030900 // forebrain development // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0072432 // response to G1 DNA damage checkpoint signaling // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 2001235 // positive regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043293 // apoptosome // inferred from direct assay /// 0043293 // apoptosome // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // non-traceable author statement /// 0016505 // peptidase activator activity involved in apoptotic process // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from electronic annotation </td> <td> -35.60 </td> <td> 97.62 </td> <td> -2.70 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.52 </td> </tr>
  <tr> <td> 217188_s_at </td> <td> 217188_s_at </td> <td> AC007182 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AC007182 /DEF=untitled /FEA=CDS_3 /DB_XREF=gi:5708446 /UG=Hs.15106 chromosome 14 open reading frame 1 </td> <td> AC007182 </td> <td> chromosome 14 open reading frame 1 </td> <td> C14orf1 </td> <td> 11161 </td> <td> NM_007176 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0030133 // transport vesicle // inferred from direct assay </td> <td>  </td> <td> 28.48 </td> <td> 115.04 </td> <td> 2.70 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202573_at </td> <td> 202573_at </td> <td> AL530441 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL530441 /FEA=EST /DB_XREF=gi:12793934 /DB_XREF=est:AL530441 /CLONE=CS0DD007YK14 (3 prime) /UG=Hs.181390 casein kinase 1, gamma 2 /FL=gb:NM_001319.2 gb:U89896.1 </td> <td> AL530441 </td> <td> casein kinase 1, gamma 2 </td> <td> CSNK1G2 </td> <td> 1455 </td> <td> NM_001319 /// XM_005259498 /// XM_005259499 /// XM_005259500 /// XM_005259501 /// XM_005259502 /// XR_430129 </td> <td> 0006468 // protein phosphorylation // traceable author statement /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046777 // protein autophosphorylation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation </td> <td> 37.05 </td> <td> 140.18 </td> <td> 2.70 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212566_at </td> <td> 212566_at </td> <td> AL523310 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL523310 /FEA=EST /DB_XREF=gi:12786803 /DB_XREF=est:AL523310 /CLONE=CS0DC001YN06 (3 prime) /UG=Hs.150580 putative translation initiation factor </td> <td> AL523310 </td> <td> microtubule-associated protein 4 </td> <td> MAP4 </td> <td> 4134 </td> <td> NM_001134364 /// NM_001134365 /// NM_002375 /// NM_030884 /// NM_030885 /// XM_005265133 /// XM_005265134 /// XM_005265135 /// XM_005265138 /// XM_005265139 /// XM_005265147 /// XM_005265155 /// XM_005265157 /// XM_005265158 /// XM_005265159 /// XM_006713140 /// XM_006713141 /// XM_006713142 /// XM_006713143 /// XM_006713144 /// XM_006713145 /// XM_006713146 /// XM_006713147 /// XM_006713148 /// XM_006713149 /// XM_006713150 /// XM_006713151 /// XM_006713152 /// XM_006713153 /// XM_006713154 /// XM_006713155 /// XM_006713156 /// XM_006713157 /// XM_006713158 /// XM_006713159 /// XM_006713160 /// XM_006713161 /// XM_006713162 /// XM_006713163 </td> <td> 0007052 // mitotic spindle organization // inferred from mutant phenotype /// 0051012 // microtubule sliding // inferred from mutant phenotype /// 0051294 // establishment of spindle orientation // inferred from genetic interaction /// 0051294 // establishment of spindle orientation // inferred from mutant phenotype /// 0051301 // cell division // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay </td> <td> 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 150.30 </td> <td> 338.20 </td> <td> 2.69 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.52 </td> </tr>
  <tr> <td> 221756_at </td> <td> 221756_at </td> <td> AL540260 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL540260 /FEA=EST /DB_XREF=gi:12870241 /DB_XREF=est:AL540260 /CLONE=CS0DF032YF03 (3 prime) /UG=Hs.26670 Human PAC clone RP3-515N1 from 22q11.2-q22 </td> <td> AL540260 </td> <td> phosphoinositide-3-kinase interacting protein 1 </td> <td> PIK3IP1 </td> <td> 113791 </td> <td> NM_001135911 /// NM_052880 </td> <td> 0014067 // negative regulation of phosphatidylinositol 3-kinase signaling // inferred from direct assay /// 0043553 // negative regulation of phosphatidylinositol 3-kinase activity // inferred from direct assay /// 0043553 // negative regulation of phosphatidylinositol 3-kinase activity // inferred from sequence or structural similarity </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0036313 // phosphatidylinositol 3-kinase catalytic subunit binding // inferred from physical interaction </td> <td> -29.60 </td> <td> 44.20 </td> <td> -2.69 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.52 </td> </tr>
  <tr> <td> 209535_s_at </td> <td> 209535_s_at </td> <td> AF127481 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF127481.1 /DEF=Homo sapiens non-ocogenic Rho GTPase-specific GTP exchange factor (proto-LBC) mRNA, complete cds.  /FEA=mRNA /GEN=proto-LBC /PROD=non-ocogenic Rho GTPase-specific GTP exchangefactor /DB_XREF=gi:5199315 /UG=Hs.301946 lymphoid blast crisis oncogene /FL=gb:AF127481.1 </td> <td> AF127481 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0010611 // regulation of cardiac muscle hypertrophy // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051168 // nuclear export // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement /// 1900169 // regulation of glucocorticoid mediated signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0004691 // cAMP-dependent protein kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // non-traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051018 // protein kinase A binding // inferred from electronic annotation </td> <td> -77.15 </td> <td> 122.08 </td> <td> -2.69 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202553_s_at </td> <td> 202553_s_at </td> <td> NM_015484 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015484.1 /DEF=Homo sapiens GCIP-interacting protein p29 (P29), mRNA. /FEA=mRNA /GEN=P29 /PROD=GCIP-interacting protein p29 /DB_XREF=gi:7661635 /UG=Hs.20013 GCIP-interacting protein p29 /FL=gb:AF273089.1 gb:AL080166.1 gb:NM_015484.1 </td> <td> NM_015484 </td> <td> SYF2 pre-mRNA-splicing factor </td> <td> SYF2 </td> <td> 25949 </td> <td> NM_015484 /// NM_207170 </td> <td> 0000075 // cell cycle checkpoint // inferred from electronic annotation /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -31.83 </td> <td> 143.04 </td> <td> -2.69 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212241_at </td> <td> 212241_at </td> <td> AI632774 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI632774 /FEA=EST /DB_XREF=gi:4684104 /DB_XREF=est:wa35a11.x1 /CLONE=IMAGE:2300060 /UG=Hs.6283 DKFZP586F1918 protein </td> <td> AI632774 </td> <td> GRINL1A complex locus 1 /// myocardial zonula adherens protein /// polymerase (RNA) II (DNA directed) polypeptide M </td> <td> GCOM1 /// MYZAP /// POLR2M </td> <td> 81488 /// 145781 /// 100820829 </td> <td> NM_001018090 /// NM_001018091 /// NM_001018095 /// NM_001018096 /// NM_001018099 /// NM_001018100 /// NM_001018102 /// NM_001285900 /// NM_015532 /// NM_152451 /// NR_027390 /// NR_104367 /// NR_104368 /// NR_104369 /// NR_104370 /// NR_104371 </td> <td> 0032774 // RNA biosynthetic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from sequence or structural similarity /// 0051685 // maintenance of ER location // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from sequence or structural similarity /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from sequence or structural similarity /// 0031674 // I band // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -51.65 </td> <td> 121.43 </td> <td> -2.69 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.52 </td> </tr>
  <tr> <td> 203345_s_at </td> <td> 203345_s_at </td> <td> AI566096 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI566096 /FEA=EST /DB_XREF=gi:4524548 /DB_XREF=est:tn53d02.x1 /CLONE=IMAGE:2172099 /UG=Hs.31016 putative DNA binding protein /FL=gb:AF072814.1 gb:NM_007358.1 </td> <td> AI566096 </td> <td> metal response element binding transcription factor 2 </td> <td> MTF2 </td> <td> 22823 </td> <td> NM_001164391 /// NM_001164392 /// NM_001164393 /// NM_007358 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007379 // segment specification // inferred from sequence or structural similarity /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048863 // stem cell differentiation // inferred from sequence or structural similarity /// 0061086 // negative regulation of histone H3-K27 methylation // inferred from sequence or structural similarity /// 0061087 // positive regulation of histone H3-K27 methylation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035064 // methylated histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 37.70 </td> <td> 156.90 </td> <td> 2.69 </td> <td> 0.03 </td> <td> 0.05 </td> <td> -4.52 </td> </tr>
  <tr> <td> 203448_s_at </td> <td> 203448_s_at </td> <td> AI347136 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI347136 /FEA=EST /DB_XREF=gi:4084342 /DB_XREF=est:tc04a11.x1 /CLONE=IMAGE:2062844 /UG=Hs.194562 telomeric repeat binding factor (NIMA-interacting) 1 /FL=gb:U40705.1 gb:NM_017489.1 </td> <td> AI347136 </td> <td> telomeric repeat binding factor (NIMA-interacting) 1 </td> <td> TERF1 </td> <td> 7013 </td> <td> NM_003218 /// NM_017489 /// XM_005251291 /// XM_005251292 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from expression pattern /// 0000723 // telomere maintenance // traceable author statement /// 0001309 // age-dependent telomere shortening // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007004 // telomere maintenance via telomerase // inferred from mutant phenotype /// 0007004 // telomere maintenance via telomerase // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // inferred from mutant phenotype /// 0008156 // negative regulation of DNA replication // inferred from direct assay /// 0010834 // telomere maintenance via telomere shortening // inferred from mutant phenotype /// 0031116 // positive regulation of microtubule polymerization // inferred from direct assay /// 0032211 // negative regulation of telomere maintenance via telomerase // inferred from genetic interaction /// 0032214 // negative regulation of telomere maintenance via semi-conservative replication // non-traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from mutant phenotype /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0051260 // protein homooligomerization // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0051974 // negative regulation of telomerase activity // inferred from genetic interaction /// 1900119 // positive regulation of execution phase of apoptosis // inferred from direct assay </td> <td> 0000781 // chromosome, telomeric region // inferred from direct assay /// 0000783 // nuclear telomere cap complex // inferred from direct assay /// 0000783 // nuclear telomere cap complex // inferred from sequence or structural similarity /// 0000784 // nuclear chromosome, telomeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003691 // double-stranded telomeric DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008301 // DNA binding, bending // inferred from direct assay /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from direct assay /// 0010521 // telomerase inhibitor activity // inferred from genetic interaction /// 0042162 // telomeric DNA binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from direct assay </td> <td> 33.57 </td> <td> 64.11 </td> <td> 2.69 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200926_at </td> <td> 200926_at </td> <td> NM_001025 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001025.1 /DEF=Homo sapiens ribosomal protein S23 (RPS23), mRNA. /FEA=mRNA /GEN=RPS23 /PROD=ribosomal protein S23 /DB_XREF=gi:4506700 /UG=Hs.3463 ribosomal protein S23 /FL=gb:D14530.1 gb:NM_001025.1 </td> <td> NM_001025 </td> <td> ribosomal protein S23 </td> <td> RPS23 </td> <td> 6228 </td> <td> NM_001025 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1020.38 </td> <td> 4371.79 </td> <td> -2.69 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218387_s_at </td> <td> 218387_s_at </td> <td> NM_012088 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012088.1 /DEF=Homo sapiens 6-phosphogluconolactonase (PGLS), mRNA. /FEA=mRNA /GEN=PGLS /PROD=6-phosphogluconolactonase /DB_XREF=gi:6912585 /UG=Hs.100071 6-phosphogluconolactonase /FL=gb:NM_012088.1 </td> <td> NM_012088 </td> <td> 6-phosphogluconolactonase </td> <td> PGLS </td> <td> 25796 </td> <td> NM_012088 /// XM_005259849 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006098 // pentose-phosphate shunt // inferred from direct assay /// 0006098 // pentose-phosphate shunt // traceable author statement /// 0009051 // pentose-phosphate shunt, oxidative branch // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0016787 // hydrolase activity // inferred from electronic annotation /// 0017057 // 6-phosphogluconolactonase activity // inferred from direct assay /// 0048029 // monosaccharide binding // inferred from electronic annotation </td> <td> -48.75 </td> <td> 236.05 </td> <td> -2.68 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 208918_s_at </td> <td> 208918_s_at </td> <td> AI334128 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI334128 /FEA=EST /DB_XREF=gi:4070687 /DB_XREF=est:qq07e12.x1 /CLONE=IMAGE:1931854 /UG=Hs.220324 hypothetical protein FLJ13052 /FL=gb:BC001709.1 </td> <td> AI334128 </td> <td> NAD kinase </td> <td> NADK </td> <td> 65220 </td> <td> NM_001198993 /// NM_001198994 /// NM_001198995 /// NM_023018 /// XM_005244778 /// XM_006710837 /// XM_006710838 /// XM_006710839 /// XR_241040 </td> <td> 0006741 // NADP biosynthetic process // inferred from electronic annotation /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // non-traceable author statement /// 0019674 // NAD metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // non-traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003951 // NAD+ kinase activity // inferred from direct assay /// 0003951 // NAD+ kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 33.00 </td> <td> 134.50 </td> <td> 2.68 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201648_at </td> <td> 201648_at </td> <td> AL039831 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL039831 /FEA=EST /DB_XREF=gi:5935215 /DB_XREF=est:DKFZp434D1112_s1 /CLONE=DKFZp434D1112 /UG=Hs.50651 Janus kinase 1 (a protein tyrosine kinase) /FL=gb:M64174.1 gb:NM_002227.1 </td> <td> AL039831 </td> <td> Janus kinase 1 </td> <td> JAK1 </td> <td> 3716 </td> <td> NM_002227 /// XM_005270841 /// XM_006710624 </td> <td> 0006468 // protein phosphorylation // traceable author statement /// 0007167 // enzyme linked receptor protein signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0038110 // interleukin-2-mediated signaling pathway // inferred from direct assay /// 0046677 // response to antibiotic // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005131 // growth hormone receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0031730 // CCR5 chemokine receptor binding // inferred from electronic annotation </td> <td> -205.05 </td> <td> 1141.28 </td> <td> -2.68 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200834_s_at </td> <td> 200834_s_at </td> <td> NM_001024 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001024.1 /DEF=Homo sapiens ribosomal protein S21 (RPS21), mRNA. /FEA=mRNA /GEN=RPS21 /PROD=ribosomal protein S21 /DB_XREF=gi:4506698 /UG=Hs.1948 ribosomal protein S21 /FL=gb:L04483.1 gb:NM_001024.1 </td> <td> NM_001024 </td> <td> ribosomal protein S21 </td> <td> RPS21 </td> <td> 6227 </td> <td> NM_001024 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000447 // endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // not recorded /// 0000461 // endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // not recorded /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0042274 // ribosomal small subunit biogenesis // not recorded /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // not recorded /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -287.95 </td> <td> 2680.53 </td> <td> -2.68 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 204618_s_at </td> <td> 204618_s_at </td> <td> NM_005254 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005254.2 /DEF=Homo sapiens GA-binding protein transcription factor, beta subunit 1 (53kD) (GABPB1), transcript variant beta, mRNA.  /FEA=mRNA /GEN=GABPB1 /PROD=GA-binding protein transcription factor, betasubunit 1 (53kD), isoform beta 1 /DB_XREF=gi:8051592 /UG=Hs.78915 GA-binding protein transcription factor, beta subunit 1 (53kD) /FL=gb:U13045.1 gb:NM_005254.2 </td> <td> NM_005254 </td> <td> GA binding protein transcription factor, beta subunit 1 </td> <td> GABPB1 </td> <td> 2553 </td> <td> NM_002041 /// NM_005254 /// NM_016654 /// NM_016655 /// NM_181427 /// XM_005254273 /// XM_005254274 /// XM_006720455 /// XM_006720456 /// XM_006720457 /// XM_006720458 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay </td> <td> -86.40 </td> <td> 342.55 </td> <td> -2.68 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 217313_at </td> <td> 217313_at </td> <td> AC004692 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AC004692 /DEF=Homo sapiens PAC clone RP5-1107K12 from 7p12-p14 /FEA=CDS /DB_XREF=gi:3135282 /UG=Hs.247699 Homo sapiens PAC clone RP5-1107K12 from 7p12-p14 </td> <td> AC004692 </td> <td>  </td> <td> AC004692.5 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -44.20 </td> <td> 103.67 </td> <td> -2.68 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 203831_at </td> <td> 203831_at </td> <td> NM_014925 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014925.1 /DEF=Homo sapiens KIAA1002 protein (KIAA1002), mRNA. /FEA=mRNA /GEN=KIAA1002 /PROD=KIAA1002 protein /DB_XREF=gi:7662441 /UG=Hs.102483 KIAA1002 protein /FL=gb:AB023219.1 gb:AF113695.1 gb:NM_014925.1 </td> <td> NM_014925 </td> <td> R3H domain containing 2 </td> <td> R3HDM2 </td> <td> 22864 </td> <td> NM_014925 /// XM_005268711 /// XM_005268715 /// XM_005268722 /// XM_005268724 /// XM_005268725 /// XM_005268727 /// XM_005268728 /// XM_005268729 /// XM_006719277 /// XM_006719278 /// XM_006719279 /// XM_006719280 /// XM_006719281 /// XM_006719282 /// XM_006719283 /// XM_006719284 /// XM_006719285 /// XM_006719286 /// XM_006719287 /// XM_006719288 /// XM_006719289 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -49.10 </td> <td> 137.97 </td> <td> -2.67 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200823_x_at </td> <td> 200823_x_at </td> <td> NM_000992 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000992.1 /DEF=Homo sapiens ribosomal protein L29 (RPL29), mRNA. /FEA=mRNA /GEN=RPL29 /PROD=ribosomal protein L29 /DB_XREF=gi:4506628 /UG=Hs.183698 ribosomal protein L29 /FL=gb:U49083.1 gb:NM_000992.1 gb:U10248.1 </td> <td> NM_000992 </td> <td> ribosomal protein L29 </td> <td> RPL29 </td> <td> 6159 </td> <td> NM_000992 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007566 // embryo implantation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -322.53 </td> <td> 1701.09 </td> <td> -2.67 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 203064_s_at </td> <td> 203064_s_at </td> <td> NM_004514 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004514.1 /DEF=Homo sapiens interleukin enhancer binding factor 1 (ILF1), mRNA. /FEA=mRNA /GEN=ILF1 /PROD=interleukin enhancer binding factor 1 /DB_XREF=gi:4758599 /UG=Hs.296281 interleukin enhancer binding factor 1 /FL=gb:U58196.1 gb:NM_004514.1 </td> <td> NM_004514 </td> <td> forkhead box K2 </td> <td> FOXK2 </td> <td> 3607 </td> <td> NM_004514 /// NM_181430 /// NM_181431 /// XM_006722281 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007389 // pattern specification process // not recorded /// 0009790 // embryo development //  /// 0009888 // tissue development // not recorded /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008301 // DNA binding, bending // not recorded /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -42.77 </td> <td> 158.49 </td> <td> -2.67 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 214319_at </td> <td> 214319_at </td> <td> W58342 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W58342 /FEA=EST /DB_XREF=gi:1365125 /DB_XREF=est:zd25a08.s1 /CLONE=IMAGE:341654 /UG=Hs.181304 putative gene product </td> <td> W58342 </td> <td> furry homolog (Drosophila) </td> <td> FRY </td> <td> 10129 </td> <td> NM_023037 /// XM_006719749 </td> <td>  </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td>  </td> <td> 84.98 </td> <td> 162.54 </td> <td> 2.67 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 211969_at </td> <td> 211969_at </td> <td> BG420237 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG420237 /FEA=EST /DB_XREF=gi:13326743 /DB_XREF=est:602448244F1 /CLONE=IMAGE:4586914 /UG=Hs.289088 heat shock 90kD protein 1, alpha /FL=gb:NM_005348.1 </td> <td> BG420237 </td> <td> heat shock protein 90kDa alpha (cytosolic), class A member 1 </td> <td> HSP90AA1 </td> <td> 3320 </td> <td> NM_001017963 /// NM_005348 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0003009 // skeletal muscle contraction // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0006839 // mitochondrial transport // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009651 // response to salt stress // inferred from electronic annotation /// 0010592 // positive regulation of lamellipodium assembly // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0042026 // protein refolding // traceable author statement /// 0043627 // response to estrogen // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045040 // protein import into mitochondrial outer membrane // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045793 // positive regulation of cell size // inferred from electronic annotation /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051131 // chaperone-mediated protein complex assembly // inferred from direct assay /// 0060452 // positive regulation of cardiac muscle contraction // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0000166 // nucleotide binding // traceable author statement /// 0002134 // UTP binding // inferred from electronic annotation /// 0002135 // CTP binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017098 // sulfonylurea receptor binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0023026 // MHC class II protein complex binding // inferred from direct assay /// 0030235 // nitric-oxide synthase regulator activity // inferred from direct assay /// 0030911 // TPR domain binding // inferred from direct assay /// 0030911 // TPR domain binding // traceable author statement /// 0032564 // dATP binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // traceable author statement /// 0044325 // ion channel binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 270.43 </td> <td> 1254.66 </td> <td> 2.67 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202299_s_at </td> <td> 202299_s_at </td> <td> NM_006402 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006402.1 /DEF=Homo sapiens hepatitis B virus x-interacting protein (9.6kD) (XIP), mRNA.  /FEA=mRNA /GEN=XIP /PROD=hepatitis B virus x-interacting protein /DB_XREF=gi:5454169 /UG=Hs.80464 hepatitis B virus x-interacting protein (9.6kD) /FL=gb:AF029890.1 gb:NM_006402.1 </td> <td> NM_006402 </td> <td> late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 </td> <td> LAMTOR5 </td> <td> 10542 </td> <td> NM_006402 </td> <td> 0008361 // regulation of cell size // inferred from mutant phenotype /// 0009615 // response to virus // traceable author statement /// 0019079 // viral genome replication // inferred from electronic annotation /// 0032008 // positive regulation of TOR signaling // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043087 // regulation of GTPase activity // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0061462 // protein localization to lysosome // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0071986 // Ragulator complex // inferred from direct assay </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0032947 // protein complex scaffold // inferred from direct assay </td> <td> 55.77 </td> <td> 441.64 </td> <td> 2.67 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201339_s_at </td> <td> 201339_s_at </td> <td> NM_002979 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002979.1 /DEF=Homo sapiens sterol carrier protein 2 (SCP2), mRNA. /FEA=mRNA /GEN=SCP2 /PROD=sterol carrier protein 2 /DB_XREF=gi:4506822 /UG=Hs.75760 sterol carrier protein 2 /FL=gb:M75883.1 gb:M75884.1 gb:M55421.1 gb:NM_002979.1 </td> <td> NM_002979 </td> <td> sterol carrier protein 2 </td> <td> SCP2 </td> <td> 6342 </td> <td> NM_001007098 /// NM_001007099 /// NM_001007100 /// NM_001007250 /// NM_001193599 /// NM_001193600 /// NM_001193617 /// NM_002979 /// XM_005271103 /// XM_005271104 </td> <td> 0006694 // steroid biosynthetic process // inferred from direct assay /// 0006699 // bile acid biosynthetic process // traceable author statement /// 0006701 // progesterone biosynthetic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // traceable author statement /// 0015914 // phospholipid transport // inferred from direct assay /// 0032385 // positive regulation of intracellular cholesterol transport // inferred from direct assay /// 0032385 // positive regulation of intracellular cholesterol transport // non-traceable author statement /// 0032959 // inositol trisphosphate biosynthetic process // inferred from direct assay /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0033559 // unsaturated fatty acid metabolic process // traceable author statement /// 0036109 // alpha-linolenic acid metabolic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045940 // positive regulation of steroid metabolic process // inferred from direct assay /// 0072659 // protein localization to plasma membrane // inferred from direct assay /// 1901373 // lipid hydroperoxide transport // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005782 // peroxisomal matrix // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000062 // fatty-acyl-CoA binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0008526 // phosphatidylinositol transporter activity // inferred from direct assay /// 0015485 // cholesterol binding // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0032934 // sterol binding // inferred from electronic annotation /// 0033814 // propanoyl-CoA C-acyltransferase activity // inferred from electronic annotation /// 0036042 // long-chain fatty acyl-CoA binding // inferred from direct assay /// 0070538 // oleic acid binding // inferred from direct assay </td> <td> 52.75 </td> <td> 299.18 </td> <td> 2.67 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 208453_s_at </td> <td> 208453_s_at </td> <td> NM_006523 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006523.1 /DEF=Homo sapiens X-prolyl aminopeptidase (aminopeptidase P)-like (XPNPEPL), mRNA.  /FEA=CDS /GEN=XPNPEPL /PROD=X-prolyl aminopeptidase (aminopeptidase P)-like /DB_XREF=gi:5730117 /UG=Hs.284202 X-prolyl aminopeptidase (aminopeptidase P)-like /FL=gb:NM_006523.1 </td> <td> NM_006523 </td> <td> X-prolyl aminopeptidase (aminopeptidase P) 1, soluble </td> <td> XPNPEP1 </td> <td> 7511 </td> <td> NM_001167604 /// NM_020383 /// NR_030724 /// XM_005270144 /// XM_005270145 /// XM_006717962 /// XM_006717963 </td> <td> 0006508 // proteolysis // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0010815 // bradykinin catabolic process // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004177 // aminopeptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070006 // metalloaminopeptidase activity // inferred from direct assay </td> <td> -52.95 </td> <td> 226.22 </td> <td> -2.67 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 209435_s_at </td> <td> 209435_s_at </td> <td> BC000265 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000265.1 /DEF=Homo sapiens, clone MGC:3182, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:3182) /DB_XREF=gi:12653008 /UG=Hs.315417 Homo sapiens, clone MGC:3182, mRNA, complete cds /FL=gb:BC000265.1 </td> <td> BC000265 </td> <td> Rho/Rac guanine nucleotide exchange factor (GEF) 2 </td> <td> ARHGEF2 </td> <td> 9181 </td> <td> NM_001162383 /// NM_001162384 /// NM_004723 /// XM_005245587 /// XM_005245588 /// XM_005245589 /// XM_005245590 /// XM_005245591 /// XM_005245592 /// XM_005245593 /// XM_005245594 /// XM_005245595 /// XM_006711622 /// XM_006711623 /// XM_006711624 /// XM_006711625 /// XM_006711626 </td> <td> 0000132 // establishment of mitotic spindle orientation // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from mutant phenotype /// 0002376 // immune system process // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0007015 // actin filament organization // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0032314 // regulation of Rac GTPase activity // inferred from direct assay /// 0032319 // regulation of Rho GTPase activity // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from direct assay /// 0032855 // positive regulation of Rac GTPase activity // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // non-traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0060546 // negative regulation of necroptotic process // inferred from sequence or structural similarity /// 0060547 // negative regulation of necrotic cell death // inferred from sequence or structural similarity /// 0071225 // cellular response to muramyl dipeptide // inferred from direct assay /// 0071356 // cellular response to tumor necrosis factor // inferred from sequence or structural similarity /// 0071474 // cellular hyperosmotic response // inferred from sequence or structural similarity /// 0097190 // apoptotic signaling pathway // traceable author statement /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from sequence or structural similarity /// 1902219 // negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from direct assay /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // non-traceable author statement /// 0017048 // Rho GTPase binding // inferred from direct assay /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048365 // Rac GTPase binding // inferred from direct assay </td> <td> -101.10 </td> <td> 314.65 </td> <td> -2.67 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200925_at </td> <td> 200925_at </td> <td> NM_004373 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004373.1 /DEF=Homo sapiens cytochrome c oxidase subunit VIa polypeptide 1 (COX6A1), mRNA.  /FEA=mRNA /GEN=COX6A1 /PROD=cytochrome c oxidase subunit VIa polypeptide 1 /DB_XREF=gi:10047079 /UG=Hs.180714 cytochrome c oxidase subunit VIa polypeptide 1 /FL=gb:NM_004373.1 </td> <td> NM_004373 </td> <td> cytochrome c oxidase subunit VIa polypeptide 1 </td> <td> COX6A1 </td> <td> 1337 </td> <td> NM_004373 </td> <td> 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005751 // mitochondrial respiratory chain complex IV // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation </td> <td> -129.35 </td> <td> 1216.17 </td> <td> -2.67 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202395_at </td> <td> 202395_at </td> <td> NM_006178 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006178.1 /DEF=Homo sapiens N-ethylmaleimide-sensitive factor (NSF), mRNA. /FEA=mRNA /GEN=NSF /PROD=N-ethylmaleimide-sensitive factor /DB_XREF=gi:11079227 /UG=Hs.108802 N-ethylmaleimide-sensitive factor /FL=gb:AF102846.2 gb:NM_006178.1 gb:AF135168.1 </td> <td> NM_006178 </td> <td> uncharacterized LOC101930324 /// N-ethylmaleimide-sensitive factor </td> <td> LOC101930324 /// NSF </td> <td> 4905 /// 101930324 </td> <td> NM_006178 /// NR_040116 /// XM_006721929 /// XM_006725276 /// XM_006725626 /// XR_250612 </td> <td> 0001921 // positive regulation of receptor recycling // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006887 // exocytosis // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0045026 // plasma membrane fusion // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017075 // syntaxin-1 binding // inferred from sequence or structural similarity /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0019905 // syntaxin binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from direct assay /// 0042623 // ATPase activity, coupled // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 36.12 </td> <td> 198.84 </td> <td> 2.67 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 211012_s_at </td> <td> 211012_s_at </td> <td> BC000080 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000080.1 /DEF=Homo sapiens, Similar to promyelocytic leukemia, clone MGC:2268, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to promyelocytic leukemia /DB_XREF=gi:12652662 /UG=Hs.89633 promyelocytic leukemia /FL=gb:BC000080.1 </td> <td> BC000080 </td> <td> promyelocytic leukemia </td> <td> PML </td> <td> 5371 </td> <td> NM_002675 /// NM_033238 /// NM_033239 /// NM_033240 /// NM_033244 /// NM_033246 /// NM_033247 /// NM_033249 /// NM_033250 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from direct assay /// 0001889 // liver development // inferred from electronic annotation /// 0001932 // regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0002230 // positive regulation of defense response to virus by host // inferred from mutant phenotype /// 0002376 // immune system process // inferred from electronic annotation /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0006605 // protein targeting // inferred from direct assay /// 0006605 // protein targeting // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007182 // common-partner SMAD protein phosphorylation // inferred from electronic annotation /// 0007184 // SMAD protein import into nucleus // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008584 // male gonad development // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from direct assay /// 0008631 // intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010522 // regulation of calcium ion transport into cytosol // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030520 // intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0030578 // PML body organization // inferred from direct assay /// 0030578 // PML body organization // inferred from mutant phenotype /// 0030850 // prostate gland development // inferred from electronic annotation /// 0030852 // regulation of granulocyte differentiation // inferred from electronic annotation /// 0030853 // negative regulation of granulocyte differentiation // inferred from direct assay /// 0031065 // positive regulation of histone deacetylation // inferred from direct assay /// 0031641 // regulation of myelination // inferred from electronic annotation /// 0032211 // negative regulation of telomere maintenance via telomerase // inferred from mutant phenotype /// 0032355 // response to estradiol // inferred from direct assay /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032469 // endoplasmic reticulum calcium ion homeostasis // inferred from sequence or structural similarity /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from mutant phenotype /// 0032689 // negative regulation of interferon-gamma production // inferred from direct assay /// 0032720 // negative regulation of tumor necrosis factor production // inferred from direct assay /// 0032736 // positive regulation of interleukin-13 production // inferred from direct assay /// 0032753 // positive regulation of interleukin-4 production // inferred from direct assay /// 0032754 // positive regulation of interleukin-5 production // inferred from direct assay /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0032938 // negative regulation of translation in response to oxidative stress // inferred from direct assay /// 0033189 // response to vitamin A // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from direct assay /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043153 // entrainment of circadian clock by photoperiod // inferred from sequence or structural similarity /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043277 // apoptotic cell clearance // inferred from mutant phenotype /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043551 // regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0045087 // innate immune response // inferred from direct assay /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045343 // regulation of MHC class I biosynthetic process // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045630 // positive regulation of T-helper 2 cell differentiation // inferred from direct assay /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045947 // negative regulation of translational initiation // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay /// 0051099 // positive regulation of binding // inferred from mutant phenotype /// 0051457 // maintenance of protein location in nucleus // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0051974 // negative regulation of telomerase activity // inferred from mutant phenotype /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060010 // Sertoli cell fate commitment // inferred from electronic annotation /// 0060058 // positive regulation of apoptotic process involved in mammary gland involution // inferred from direct assay /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060591 // chondroblast differentiation // inferred from electronic annotation /// 0061037 // negative regulation of cartilage development // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from direct assay /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation /// 0071391 // cellular response to estrogen stimulus // inferred from direct assay /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from electronic annotation /// 0090398 // cellular senescence // inferred from direct assay /// 0097191 // extrinsic apoptotic signaling pathway // inferred from electronic annotation /// 1902187 // negative regulation of viral release from host cell // inferred from direct assay /// 2000059 // negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 2000779 // regulation of double-strand break repair // inferred from mutant phenotype /// 2001235 // positive regulation of apoptotic signaling pathway // inferred from electronic annotation /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred by curator /// 0016020 // membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0042406 // extrinsic component of endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000900 // translation repressor activity, nucleic acid binding // inferred from electronic annotation /// 0001972 // retinoic acid binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003708 // retinoic acid receptor activity // inferred from direct assay /// 0003708 // retinoic acid receptor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008144 // drug binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0031490 // chromatin DNA binding // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032183 // SUMO binding // inferred from physical interaction /// 0035014 // phosphatidylinositol 3-kinase regulator activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043422 // protein kinase B binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0044323 // retinoic acid-responsive element binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0048027 // mRNA 5'-UTR binding // inferred from electronic annotation /// 0050897 // cobalt ion binding // inferred from direct assay /// 0051018 // protein kinase A binding // inferred from direct assay </td> <td> -31.93 </td> <td> 71.91 </td> <td> -2.67 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212746_s_at </td> <td> 212746_s_at </td> <td> AA126789 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA126789 /FEA=EST /DB_XREF=gi:1686271 /DB_XREF=est:zn87e10.s1 /CLONE=IMAGE:565194 /UG=Hs.25132 KIAA0470 gene product </td> <td> AA126789 </td> <td> centrosomal protein 170kDa /// centrosomal protein 170kDa pseudogene 1 </td> <td> CEP170 /// CEP170P1 </td> <td> 9859 /// 645455 </td> <td> NM_001042404 /// NM_001042405 /// NM_014812 /// NM_153243 /// NR_003135 /// XM_005273361 /// XM_006711843 /// XM_006711844 /// XM_006711845 /// XM_006711846 /// XM_006711847 /// XM_006711848 /// XM_006711849 /// XM_006711850 /// XM_006711851 /// XM_006711852 /// XM_006724974 /// XM_006724975 /// XM_006724976 /// XM_006724977 /// XM_006724978 /// XM_006724979 /// XM_006724980 /// XM_006724981 /// XM_006724982 /// XM_006724983 /// XM_006724984 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 116.13 </td> <td> 305.26 </td> <td> 2.67 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202314_at </td> <td> 202314_at </td> <td> NM_000786 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000786.1 /DEF=Homo sapiens cytochrome P450, 51 (lanosterol 14-alpha-demethylase) (CYP51), mRNA.  /FEA=mRNA /GEN=CYP51 /PROD=cytochrome P450, 51 (lanosterol14-alpha-demethylase) /DB_XREF=gi:4503242 /UG=Hs.226213 cytochrome P450, 51 (lanosterol 14-alpha-demethylase) /FL=gb:U23942.1 gb:NM_000786.1 gb:D55653.1 </td> <td> NM_000786 </td> <td> cytochrome P450, family 51, subfamily A, polypeptide 1 /// leucine-rich repeats and death domain containing 1 </td> <td> CYP51A1 /// LRRD1 </td> <td> 1595 /// 401387 </td> <td> NM_000786 /// NM_001045475 /// NM_001146152 /// NM_001161528 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from direct assay /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0016125 // sterol metabolic process // traceable author statement /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0033488 // cholesterol biosynthetic process via 24,25-dihydrolanosterol // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070988 // demethylation // inferred from direct assay /// 0070988 // demethylation // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008398 // sterol 14-demethylase activity // inferred from direct assay /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0020037 // heme binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 31.50 </td> <td> 65.62 </td> <td> 2.66 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 205284_at </td> <td> 205284_at </td> <td> NM_014777 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014777.1 /DEF=Homo sapiens KIAA0133 gene product (KIAA0133), mRNA. /FEA=mRNA /GEN=KIAA0133 /PROD=KIAA0133 gene product /DB_XREF=gi:7661931 /UG=Hs.57730 KIAA0133 gene product /FL=gb:D50923.1 gb:NM_014777.1 </td> <td> NM_014777 </td> <td> URB2 ribosome biogenesis 2 homolog (S. cerevisiae) </td> <td> URB2 </td> <td> 9816 </td> <td> NM_014777 /// XM_005273360 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay </td> <td>  </td> <td> 31.65 </td> <td> 44.45 </td> <td> 2.66 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 203162_s_at </td> <td> 203162_s_at </td> <td> NM_005886 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005886.1 /DEF=Homo sapiens katanin p80 (WD40-containing) subunit B 1 (KATNB1), mRNA.  /FEA=mRNA /GEN=KATNB1 /PROD=katanin p80 subunit B 1 /DB_XREF=gi:5031816 /UG=Hs.275675 katanin p80 (WD40-containing) subunit B 1 /FL=gb:BC001353.1 gb:AF052432.1 gb:NM_005886.1 </td> <td> NM_005886 </td> <td> katanin p80 (WD repeat containing) subunit B 1 </td> <td> KATNB1 </td> <td> 10300 </td> <td> NM_005886 /// XM_005255772 /// XM_006721121 /// XM_006721122 /// XM_006721123 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006605 // protein targeting // non-traceable author statement /// 0007026 // negative regulation of microtubule depolymerization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007079 // mitotic chromosome movement towards spindle pole // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0031117 // positive regulation of microtubule depolymerization // inferred from mutant phenotype /// 0051013 // microtubule severing // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0008352 // katanin complex // inferred from direct assay /// 0008352 // katanin complex // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008017 // microtubule binding // non-traceable author statement /// 0008568 // microtubule-severing ATPase activity // inferred from direct assay /// 0045502 // dynein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> -35.35 </td> <td> 123.08 </td> <td> -2.66 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200848_at </td> <td> 200848_at </td> <td> AA479488 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA479488 /FEA=EST /DB_XREF=gi:2208044 /DB_XREF=est:zv21c09.s1 /CLONE=IMAGE:754288 /UG=Hs.4113 S-adenosylhomocysteine hydrolase-like 1 /FL=gb:U82761.1 gb:NM_006621.1 </td> <td> AA479488 </td> <td> adenosylhomocysteinase-like 1 </td> <td> AHCYL1 </td> <td> 10768 </td> <td> NM_001242673 /// NM_001242674 /// NM_001242675 /// NM_001242676 /// NM_006621 </td> <td> 0006378 // mRNA polyadenylation // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0010765 // positive regulation of sodium ion transport // inferred from electronic annotation /// 0031440 // regulation of mRNA 3'-end processing // inferred from electronic annotation /// 0032412 // regulation of ion transmembrane transporter activity // inferred from electronic annotation /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004013 // adenosylhomocysteinase activity // inferred from electronic annotation /// 0004455 // ketol-acid reductoisomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation </td> <td> 69.45 </td> <td> 225.65 </td> <td> 2.66 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200849_s_at </td> <td> 200849_s_at </td> <td> AI589266 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI589266 /FEA=EST /DB_XREF=gi:4598314 /DB_XREF=est:tr58c06.x2 /CLONE=IMAGE:2222506 /UG=Hs.4113 S-adenosylhomocysteine hydrolase-like 1 /FL=gb:U82761.1 gb:NM_006621.1 </td> <td> AI589266 </td> <td> adenosylhomocysteinase-like 1 </td> <td> AHCYL1 </td> <td> 10768 </td> <td> NM_001242673 /// NM_001242674 /// NM_001242675 /// NM_001242676 /// NM_006621 </td> <td> 0006378 // mRNA polyadenylation // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0010765 // positive regulation of sodium ion transport // inferred from electronic annotation /// 0031440 // regulation of mRNA 3'-end processing // inferred from electronic annotation /// 0032412 // regulation of ion transmembrane transporter activity // inferred from electronic annotation /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004013 // adenosylhomocysteinase activity // inferred from electronic annotation /// 0004455 // ketol-acid reductoisomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation </td> <td> 67.75 </td> <td> 240.62 </td> <td> 2.66 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202244_at </td> <td> 202244_at </td> <td> NM_002796 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002796.1 /DEF=Homo sapiens proteasome (prosome, macropain) subunit, beta type, 4 (PSMB4), mRNA.  /FEA=mRNA /GEN=PSMB4 /PROD=proteasome (prosome, macropain) subunit, betatype, 4 /DB_XREF=gi:4506198 /UG=Hs.89545 proteasome (prosome, macropain) subunit, beta type, 4 /FL=gb:BC000331.1 gb:NM_002796.1 gb:D26600.1 </td> <td> NM_002796 </td> <td> proteasome (prosome, macropain) subunit, beta type, 4 </td> <td> PSMB4 </td> <td> 5692 </td> <td> NM_002796 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002862 // negative regulation of inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001530 // lipopolysaccharide binding // inferred from electronic annotation /// 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 132.07 </td> <td> 801.66 </td> <td> 2.66 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212604_at </td> <td> 212604_at </td> <td> AI937794 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI937794 /FEA=EST /DB_XREF=gi:5676664 /DB_XREF=est:wp82g10.x1 /CLONE=IMAGE:2468322 /UG=Hs.154655 imogen 38 /FL=gb:NM_005830.1 </td> <td> AI937794 </td> <td> mitochondrial ribosomal protein S31 </td> <td> MRPS31 </td> <td> 10240 </td> <td> NM_005830 </td> <td>  </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005763 // mitochondrial small ribosomal subunit // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 40.92 </td> <td> 119.04 </td> <td> 2.66 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201486_at </td> <td> 201486_at </td> <td> NM_002902 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002902.1 /DEF=Homo sapiens reticulocalbin 2, EF-hand calcium binding domain (RCN2), mRNA.  /FEA=mRNA /GEN=RCN2 /PROD=reticulocalbin 2, EF-hand calcium bindingdomain /DB_XREF=gi:4506456 /UG=Hs.79088 reticulocalbin 2, EF-hand calcium binding domain /FL=gb:BC004892.1 gb:NM_002902.1 </td> <td> NM_002902 </td> <td> reticulocalbin 2, EF-hand calcium binding domain </td> <td> RCN2 </td> <td> 5955 </td> <td> NM_001271837 /// NM_002902 </td> <td>  </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 95.68 </td> <td> 307.89 </td> <td> 2.66 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218247_s_at </td> <td> 218247_s_at </td> <td> NM_016626 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016626.1 /DEF=Homo sapiens hypothetical protein (LOC51320), mRNA. /FEA=mRNA /GEN=LOC51320 /PROD=hypothetical protein /DB_XREF=gi:7706165 /UG=Hs.12830 hypothetical protein /FL=gb:AF208855.1 gb:NM_016626.1 </td> <td> NM_016626 </td> <td> mex-3 RNA binding family member C </td> <td> MEX3C </td> <td> 51320 </td> <td> NM_016626 </td> <td> 0003415 // chondrocyte hypertrophy // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0045598 // regulation of fat cell differentiation // inferred from electronic annotation /// 0097009 // energy homeostasis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -45.48 </td> <td> 196.16 </td> <td> -2.65 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 50277_at </td> <td> 50277_at </td> <td> AW001443 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AW001443:wu31e12.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-990785 /clone_end=3' /gb=AW001443 /gi=5848359 /ug=Hs.239110 /len=490 </td> <td> AW001443 </td> <td> golgi-associated, gamma adaptin ear containing, ARF binding protein 1 </td> <td> GGA1 </td> <td> 26088 </td> <td> NM_001001560 /// NM_001001561 /// NM_001172687 /// NM_001172688 /// NM_013365 /// XM_005261517 /// XM_005261518 /// XM_005261520 /// XM_005261522 /// XM_006724228 /// XM_006724229 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 38.50 </td> <td> 359.35 </td> <td> 2.65 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218126_at </td> <td> 218126_at </td> <td> NM_018145 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018145.1 /DEF=Homo sapiens hypothetical protein FLJ10579 (FLJ10579), mRNA. /FEA=mRNA /GEN=FLJ10579 /PROD=hypothetical protein FLJ10579 /DB_XREF=gi:8922531 /UG=Hs.8055 hypothetical protein FLJ10579 /FL=gb:NM_018145.1 </td> <td> NM_018145 </td> <td> regulator of microtubule dynamics 3 </td> <td> RMDN3 </td> <td> 55177 </td> <td> NM_018145 /// XM_005254531 </td> <td> 0006874 // cellular calcium ion homeostasis // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 50.17 </td> <td> 152.84 </td> <td> 2.65 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212410_at </td> <td> 212410_at </td> <td> AI346431 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI346431 /FEA=EST /DB_XREF=gi:4083637 /DB_XREF=est:qp50g09.x1 /CLONE=IMAGE:1926496 /UG=Hs.75188 wee1+ (S. pombe) homolog </td> <td> AI346431 </td> <td> mitochondrial calcium uptake 2 </td> <td> MICU2 </td> <td> 221154 </td> <td> NM_152726 /// XR_429214 </td> <td> 0006851 // mitochondrial calcium ion transport // inferred from direct assay /// 0051561 // positive regulation of mitochondrial calcium ion concentration // inferred from electronic annotation /// 0051562 // negative regulation of mitochondrial calcium ion concentration // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0034704 // calcium channel complex // inferred from sequence or structural similarity /// 1990246 // uniplex complex // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> 59.85 </td> <td> 198.10 </td> <td> 2.65 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200927_s_at </td> <td> 200927_s_at </td> <td> AA919115 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA919115 /FEA=EST /DB_XREF=gi:3059005 /DB_XREF=est:ol85g11.s1 /CLONE=IMAGE:1536452 /UG=Hs.5807 GTPase Rab14 /FL=gb:AF152463.1 gb:AF203689.1 gb:AL162081.1 gb:NM_016322.1 </td> <td> AA919115 </td> <td> RAB14, member RAS oncogene family </td> <td> RAB14 </td> <td> 51552 </td> <td> NM_016322 </td> <td> 0006184 // GTP catabolic process // not recorded /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from sequence or structural similarity /// 0006895 // Golgi to endosome transport // traceable author statement /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007269 // neurotransmitter secretion // non-traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // non-traceable author statement /// 0032456 // endocytic recycling // inferred from direct assay /// 0032880 // regulation of protein localization // inferred from direct assay /// 0046907 // intracellular transport // non-traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005791 // rough endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030140 // trans-Golgi network transport vesicle // inferred from sequence or structural similarity /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0055037 // recycling endosome // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0019003 // GDP binding // inferred from direct assay </td> <td> 41.05 </td> <td> 242.25 </td> <td> 2.65 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218768_at </td> <td> 218768_at </td> <td> NM_020401 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020401.1 /DEF=Homo sapiens nuclear pore complex protein (NUP107), mRNA. /FEA=mRNA /GEN=NUP107 /PROD=nuclear pore complex protein /DB_XREF=gi:9966880 /UG=Hs.236204 nuclear pore complex protein /FL=gb:NM_020401.1 </td> <td> NM_020401 </td> <td> nucleoporin 107kDa </td> <td> NUP107 </td> <td> 57122 </td> <td> NM_020401 /// XM_005269037 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051292 // nuclear pore complex assembly // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031080 // nuclear pore outer ring // non-traceable author statement /// 0031965 // nuclear membrane // inferred from direct assay /// 0034399 // nuclear periphery // inferred from direct assay </td> <td> 0005487 // nucleocytoplasmic transporter activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017056 // structural constituent of nuclear pore // inferred from mutant phenotype </td> <td> 44.15 </td> <td> 180.55 </td> <td> 2.65 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202598_at </td> <td> 202598_at </td> <td> NM_005979 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005979.1 /DEF=Homo sapiens S100 calcium-binding protein A13 (S100A13), mRNA. /FEA=mRNA /GEN=S100A13 /PROD=S100 calcium-binding protein A13 /DB_XREF=gi:5174658 /UG=Hs.14331 S100 calcium-binding protein A13 /FL=gb:BC000632.1 gb:NM_005979.1 </td> <td> NM_005979 </td> <td> S100 calcium binding protein A13 </td> <td> S100A13 </td> <td> 6284 </td> <td> NM_001024210 /// NM_001024211 /// NM_001024212 /// NM_001024213 /// NM_005979 /// XM_005245434 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043303 // mast cell degranulation // non-traceable author statement /// 0046688 // response to copper ion // inferred from electronic annotation /// 0050663 // cytokine secretion // inferred from mutant phenotype /// 0050703 // interleukin-1 alpha secretion // inferred from direct assay /// 0051602 // response to electrical stimulus // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0042629 // mast cell granule // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005507 // copper ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050786 // RAGE receptor binding // inferred from physical interaction </td> <td> 58.27 </td> <td> 402.76 </td> <td> 2.64 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 219559_at </td> <td> 219559_at </td> <td> NM_022082 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022082.1 /DEF=Homo sapiens hypothetical protein FLJ23412 (FLJ23412), mRNA. /FEA=mRNA /GEN=FLJ23412 /PROD=hypothetical protein FLJ23412 /DB_XREF=gi:11545794 /UG=Hs.34487 hypothetical protein FLJ23412 /FL=gb:NM_022082.1 </td> <td> NM_022082 </td> <td> solute carrier family 17 (vesicular nucleotide transporter), member 9 </td> <td> SLC17A9 </td> <td> 63910 </td> <td> NM_022082 /// XM_005260228 /// XM_006723853 /// XR_430309 /// XR_430310 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005215 // transporter activity // inferred from electronic annotation </td> <td> 44.40 </td> <td> 136.12 </td> <td> 2.64 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 211275_s_at </td> <td> 211275_s_at </td> <td> AF087942 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF087942.1 /DEF=Homo sapiens glycogenin-1L mRNA, complete cds. /FEA=mRNA /PROD=glycogenin-1L /DB_XREF=gi:5814084 /UG=Hs.174071 glycogenin /FL=gb:AF087942.1 </td> <td> AF087942 </td> <td> glycogenin 1 </td> <td> GYG1 </td> <td> 2992 </td> <td> NM_001184720 /// NM_001184721 /// NM_004130 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005536 // glucose binding // inferred from electronic annotation /// 0008466 // glycogenin glucosyltransferase activity // not recorded /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 40.45 </td> <td> 352.60 </td> <td> 2.64 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202010_s_at </td> <td> 202010_s_at </td> <td> NM_021188 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021188.1 /DEF=Homo sapiens clones 23667 and 23775 zinc finger protein (LOC57862), mRNA.  /FEA=mRNA /GEN=LOC57862 /PROD=clones 23667 and 23775 zinc finger protein /DB_XREF=gi:10863994 /UG=Hs.7137 clones 23667 and 23775 zinc finger protein /FL=gb:NM_021188.1 gb:U90919.1 </td> <td> NM_021188 </td> <td> prostaglandin reductase 2 /// zinc finger protein 410 </td> <td> PTGR2 /// ZNF410 </td> <td> 57862 /// 145482 </td> <td> NM_001146154 /// NM_001146155 /// NM_001242924 /// NM_001242926 /// NM_001242927 /// NM_001242928 /// NM_021188 /// NM_152444 /// NR_040251 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006693 // prostaglandin metabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0036132 // 13-prostaglandin reductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047522 // 15-oxoprostaglandin 13-oxidase activity // inferred from direct assay </td> <td> -51.63 </td> <td> 204.09 </td> <td> -2.64 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202428_x_at </td> <td> 202428_x_at </td> <td> NM_020548 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020548.1 /DEF=Homo sapiens diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein) (DBI), mRNA.  /FEA=mRNA /GEN=DBI /PROD=diazepam binding inhibitor /DB_XREF=gi:10140852 /UG=Hs.78888 diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein) /FL=gb:NM_020548.1 gb:M14200.1 </td> <td> NM_020548 </td> <td> diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) </td> <td> DBI </td> <td> 1622 </td> <td> NM_001079862 /// NM_001079863 /// NM_001178017 /// NM_001178041 /// NM_001178042 /// NM_001178043 /// NM_001282633 /// NM_001282634 /// NM_001282635 /// NM_001282636 /// NM_020548 /// NR_104221 </td> <td> 0001942 // hair follicle development // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0018345 // protein palmitoylation // inferred from direct assay /// 0036151 // phosphatidylcholine acyl-chain remodeling // inferred from direct assay /// 0043588 // skin development // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097038 // perinuclear endoplasmic reticulum // inferred from direct assay </td> <td> 0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0030156 // benzodiazepine receptor binding // traceable author statement /// 0036042 // long-chain fatty acyl-CoA binding // inferred from direct assay /// 0046983 // protein dimerization activity // inferred from direct assay </td> <td> 192.50 </td> <td> 916.50 </td> <td> 2.64 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 208922_s_at </td> <td> 208922_s_at </td> <td> BC004904 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004904.1 /DEF=Homo sapiens, nuclear RNA export factor 1, clone MGC:4612, mRNA, complete cds.  /FEA=mRNA /PROD=nuclear RNA export factor 1 /DB_XREF=gi:13436184 /UG=Hs.323502 nuclear RNA export factor 1 /FL=gb:BC004904.1 gb:U80073.1 gb:AF126246.1 gb:AF112880.1 gb:NM_006362.1 </td> <td> BC004904 </td> <td> nuclear RNA export factor 1 </td> <td> NXF1 </td> <td> 10482 </td> <td> NM_001081491 /// NM_006362 /// XM_006718418 /// XM_006718419 /// XM_006718420 </td> <td> 0006405 // RNA export from nucleus // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016973 // poly(A)+ mRNA export from nucleus // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0000346 // transcription export complex // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from direct assay /// 0042405 // nuclear inclusion body // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005487 // nucleocytoplasmic transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -43.75 </td> <td> 215.85 </td> <td> -2.64 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212832_s_at </td> <td> 212832_s_at </td> <td> AI143124 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI143124 /FEA=EST /DB_XREF=gi:3664933 /DB_XREF=est:qb76c12.x1 /CLONE=IMAGE:1706038 /UG=Hs.76989 KIAA0097 gene product </td> <td> AI143124 </td> <td> cytoskeleton associated protein 5 </td> <td> CKAP5 </td> <td> 9793 </td> <td> NM_001008938 /// NM_014756 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007051 // spindle organization // inferred from mutant phenotype /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0030951 // establishment or maintenance of microtubule cytoskeleton polarity // inferred from mutant phenotype /// 0050658 // RNA transport // inferred from sequence or structural similarity /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0000930 // gamma-tubulin complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0035371 // microtubule plus-end // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0004519 // endonuclease activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 54.90 </td> <td> 249.85 </td> <td> 2.64 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212893_at </td> <td> 212893_at </td> <td> AL080063 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL080063.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564I052 (from clone DKFZp564I052). /FEA=mRNA /GEN=DKFZp564I052 /PROD=hypothetical protein /DB_XREF=gi:5262468 /UG=Hs.5364 DKFZP564I052 protein </td> <td> AL080063 </td> <td> zinc finger, ZZ-type containing 3 </td> <td> ZZZ3 </td> <td> 26009 </td> <td> NM_015534 /// XM_005270725 /// XM_005270726 /// XM_005270727 /// XM_005270728 /// XM_005270729 </td> <td> 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -34.35 </td> <td> 218.35 </td> <td> -2.64 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201628_s_at </td> <td> 201628_s_at </td> <td> NM_006570 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006570.1 /DEF=Homo sapiens Ras-related GTP-binding protein (RAGA), mRNA. /FEA=mRNA /GEN=RAGA /PROD=Ras-related GTP-binding protein /DB_XREF=gi:5729998 /UG=Hs.57304 Ras-related GTP-binding protein /FL=gb:U41654.1 gb:NM_006570.1 </td> <td> NM_006570 </td> <td> Ras-related GTP binding A </td> <td> RRAGA </td> <td> 10670 </td> <td> NM_006570 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from direct assay /// 0032008 // positive regulation of TOR signaling // non-traceable author statement /// 0034613 // cellular protein localization // inferred from mutant phenotype /// 0045919 // positive regulation of cytolysis // inferred from direct assay /// 0071230 // cellular response to amino acid stimulus // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from direct assay </td> <td> 71.83 </td> <td> 533.94 </td> <td> 2.64 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201564_s_at </td> <td> 201564_s_at </td> <td> NM_003088 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003088.1 /DEF=Homo sapiens singed (Drosophila)-like (sea urchin fascin homolog like) (SNL), mRNA.  /FEA=mRNA /GEN=SNL /PROD=singed (Drosophila)-like (sea urchin fascinhomolog like) /DB_XREF=gi:4507114 /UG=Hs.118400 singed (Drosophila)-like (sea urchin fascin homolog like) /FL=gb:BC000521.1 gb:NM_003088.1 gb:U03057.1 gb:U09873.1 </td> <td> NM_003088 </td> <td> fascin actin-bundling protein 1 </td> <td> FSCN1 </td> <td> 6624 </td> <td> NM_003088 </td> <td> 0008283 // cell proliferation // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0048870 // cell motility // inferred from direct assay /// 0051017 // actin filament bundle assembly // inferred from direct assay </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071437 // invadopodium // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from direct assay </td> <td> 72.87 </td> <td> 297.99 </td> <td> 2.64 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 211070_x_at </td> <td> 211070_x_at </td> <td> BC006466 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006466.1 /DEF=Homo sapiens, clone MGC:2310, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:2310) /DB_XREF=gi:13623678 /FL=gb:BC006466.1 </td> <td> BC006466 </td> <td> diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) </td> <td> DBI </td> <td> 1622 </td> <td> NM_001079862 /// NM_001079863 /// NM_001178017 /// NM_001178041 /// NM_001178042 /// NM_001178043 /// NM_001282633 /// NM_001282634 /// NM_001282635 /// NM_001282636 /// NM_020548 /// NR_104221 </td> <td> 0001942 // hair follicle development // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0018345 // protein palmitoylation // inferred from direct assay /// 0036151 // phosphatidylcholine acyl-chain remodeling // inferred from direct assay /// 0043588 // skin development // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097038 // perinuclear endoplasmic reticulum // inferred from direct assay </td> <td> 0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0030156 // benzodiazepine receptor binding // traceable author statement /// 0036042 // long-chain fatty acyl-CoA binding // inferred from direct assay /// 0046983 // protein dimerization activity // inferred from direct assay </td> <td> 160.70 </td> <td> 688.45 </td> <td> 2.64 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 211927_x_at </td> <td> 211927_x_at </td> <td> BE963164 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE963164 /FEA=EST /DB_XREF=gi:11766582 /DB_XREF=est:601656973R1 /CLONE=IMAGE:3865650 /UG=Hs.2186 eukaryotic translation elongation factor 1 gamma </td> <td> BE963164 </td> <td> eukaryotic translation elongation factor 1 gamma /// microRNA 3654 </td> <td> EEF1G /// MIR3654 </td> <td> 1937 /// 100500804 </td> <td> NM_001404 /// NR_037427 </td> <td> 0006412 // translation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005853 // eukaryotic translation elongation factor 1 complex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -638.35 </td> <td> 3657.95 </td> <td> -2.64 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 217122_s_at </td> <td> 217122_s_at </td> <td> AL031282 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL031282 /DEF=Human DNA sequence from clone 283E3 on chromosome 1p36.21-36.33. Contains the alternatively spliced gene for Matrix Metalloproteinase in the Female Reproductive tract MIFR1, -2, MMP2122A, -B and -C, a novel gene, the alternatively spliced CDC2L2 ... /FEA=mRNA_6 /DB_XREF=gi:3860395 /UG=Hs.214646 KIAA0447 gene product </td> <td> AL031282 </td> <td> solute carrier family 35, member E2 /// solute carrier family 35, member E2B </td> <td> SLC35E2 /// SLC35E2B </td> <td> 9906 /// 728661 </td> <td> NM_001110781 /// NM_001199787 /// NM_001290264 /// NM_182838 /// XM_006710870 /// XM_006710871 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 58.20 </td> <td> 291.82 </td> <td> 2.63 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201589_at </td> <td> 201589_at </td> <td> D80000 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D80000.1 /DEF=Human mRNA for KIAA0178 gene, partial cds. /FEA=mRNA /GEN=KIAA0178 /DB_XREF=gi:1136415 /UG=Hs.211602 SMC1 (structural maintenance of chromosomes 1, yeast)-like 1 /FL=gb:NM_006306.1 </td> <td> D80000 </td> <td> structural maintenance of chromosomes 1A </td> <td> SMC1A </td> <td> 8243 </td> <td> NM_001281463 /// NM_006306 </td> <td> 0000070 // mitotic sister chromatid segregation // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007052 // mitotic spindle organization // traceable author statement /// 0007062 // sister chromatid cohesion // inferred from mutant phenotype /// 0007064 // mitotic sister chromatid cohesion // traceable author statement /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007093 // mitotic cell cycle checkpoint // inferred from direct assay /// 0007126 // meiotic nuclear division // inferred from sequence or structural similarity /// 0008380 // RNA splicing // traceable author statement /// 0009314 // response to radiation // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0030261 // chromosome condensation // inferred from electronic annotation /// 0032876 // negative regulation of DNA endoreduplication // inferred from mutant phenotype /// 0042770 // signal transduction in response to DNA damage // inferred from direct assay /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // traceable author statement /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008278 // cohesin complex // inferred from electronic annotation /// 0008280 // cohesin core heterodimer // traceable author statement /// 0030893 // meiotic cohesin complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0036033 // mediator complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> 73.97 </td> <td> 266.06 </td> <td> 2.63 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201543_s_at </td> <td> 201543_s_at </td> <td> NM_020150 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020150.1 /DEF=Homo sapiens SAR1 protein (SAR1), mRNA. /FEA=mRNA /GEN=SAR1 /PROD=SAR1 protein /DB_XREF=gi:9910541 /UG=Hs.110796 SAR1 protein /FL=gb:AY008268.1 gb:AL136724.1 gb:AF261717.1 gb:NM_020150.1 </td> <td> NM_020150 </td> <td> secretion associated, Ras related GTPase 1A </td> <td> SAR1A </td> <td> 56681 </td> <td> NM_001142648 /// NM_020150 </td> <td> 0006184 // GTP catabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation </td> <td> -37.65 </td> <td> 230.60 </td> <td> -2.63 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201944_at </td> <td> 201944_at </td> <td> NM_000521 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000521.2 /DEF=Homo sapiens hexosaminidase B (beta polypeptide) (HEXB), mRNA. /FEA=mRNA /GEN=HEXB /PROD=hexosaminidase B preproprotein /DB_XREF=gi:13128866 /UG=Hs.51043 hexosaminidase B (beta polypeptide) /FL=gb:NM_000521.2 gb:M19735.1 </td> <td> NM_000521 </td> <td> hexosaminidase B (beta polypeptide) </td> <td> HEXB </td> <td> 3074 </td> <td> NM_000521 /// NM_001292004 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0006689 // ganglioside catabolic process // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation /// 0007341 // penetration of zona pellucida // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008049 // male courtship behavior // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0009313 // oligosaccharide catabolic process // inferred from electronic annotation /// 0019915 // lipid storage // inferred from electronic annotation /// 0019953 // sexual reproduction // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030207 // chondroitin sulfate catabolic process // traceable author statement /// 0030212 // hyaluronan metabolic process // traceable author statement /// 0030214 // hyaluronan catabolic process // traceable author statement /// 0031323 // regulation of cellular metabolic process // inferred from electronic annotation /// 0042339 // keratan sulfate metabolic process // traceable author statement /// 0042340 // keratan sulfate catabolic process // traceable author statement /// 0042552 // myelination // inferred from electronic annotation /// 0043615 // astrocyte cell migration // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048477 // oogenesis // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0050905 // neuromuscular process // inferred from electronic annotation </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004563 // beta-N-acetylhexosaminidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay </td> <td> -42.30 </td> <td> 471.55 </td> <td> -2.63 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218203_at </td> <td> 218203_at </td> <td> NM_013338 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013338.2 /DEF=Homo sapiens Alg5, S. cerevisiae, homolog of (ALG5), mRNA. /FEA=mRNA /GEN=ALG5 /PROD=dolichyl phosphate glucosyltransferase /DB_XREF=gi:9665250 /UG=Hs.227933 Alg5, S. cerevisiae, homolog of /FL=gb:AF102850.1 gb:AF161498.1 gb:NM_013338.2 gb:AF183413.1 </td> <td> NM_013338 </td> <td> ALG5, dolichyl-phosphate beta-glucosyltransferase </td> <td> ALG5 </td> <td> 29880 </td> <td> NM_001142364 /// NM_013338 /// XM_005266362 </td> <td> 0006486 // protein glycosylation // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004576 // oligosaccharyl transferase activity // traceable author statement /// 0004581 // dolichyl-phosphate beta-glucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> 67.35 </td> <td> 297.75 </td> <td> 2.63 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 214870_x_at </td> <td> 214870_x_at </td> <td> AC002045 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AC002045 /DEF=Human Chromosome 16 BAC clone CIT987SK-A-589H1 /FEA=mRNA_2 /DB_XREF=gi:2951945 /UG=Hs.251928 nuclear pore complex interacting protein </td> <td> AC002045 </td> <td> polycystin-1-like /// nuclear pore complex-interacting protein family member A1-like /// nuclear pore complex interacting protein family, member A1 /// nuclear pore complex interacting protein family, member A2 /// nuclear pore complex interacting protein family, member A3 /// nuclear pore complex interacting protein family, member A5 /// nuclear pore complex interacting protein family, member A7 /// nuclear pore complex interacting protein family, member A8 /// polycystic kidney disease 1 (autosomal dominant) pseudogene 1 </td> <td> LOC101930075 /// LOC102724993 /// NPIPA1 /// NPIPA2 /// NPIPA3 /// NPIPA5 /// NPIPA7 /// NPIPA8 /// PKD1P1 </td> <td> 9284 /// 339044 /// 642778 /// 642799 /// 100288332 /// 101059938 /// 101059953 /// 101930075 /// 102724993 </td> <td> NM_001277323 /// NM_001277324 /// NM_001277325 /// NM_001282507 /// NM_001282511 /// NM_006985 /// NR_036447 /// XM_005255019 /// XM_005255020 /// XM_005255021 /// XM_005255024 /// XM_005255484 /// XM_005255485 /// XM_005255486 /// XM_005255487 /// XM_005255488 /// XM_005255489 /// XM_005255490 /// XM_005255491 /// XM_005255492 /// XM_005255694 /// XM_005255695 /// XM_005255735 /// XM_005255737 /// XM_005255738 /// XM_005276493 /// XM_006720823 /// XM_006720824 /// XM_006720825 /// XM_006720826 /// XM_006720827 /// XM_006720828 /// XM_006720829 /// XM_006720830 /// XM_006720916 /// XM_006720917 /// XM_006720979 /// XM_006720980 /// XM_006725185 /// XM_006725186 /// XM_006725187 /// XM_006725188 /// XM_006725189 /// XM_006725190 /// XM_006725191 /// XM_006725205 /// XM_006725206 /// XM_006725207 /// XM_006725208 /// XM_006725209 /// XM_006725210 /// XM_006725211 /// XM_006725212 /// XM_006725213 /// XM_006725232 /// XM_006725233 /// XM_006725234 /// XM_006725235 /// XM_006726604 /// XM_006726605 /// XM_006726606 /// XM_006726607 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td>  </td> <td> -97.82 </td> <td> 373.31 </td> <td> -2.63 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201890_at </td> <td> 201890_at </td> <td> BE966236 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE966236 /FEA=EST /DB_XREF=gi:11771437 /DB_XREF=est:601660172R1 /CLONE=IMAGE:3905920 /UG=Hs.75319 ribonucleotide reductase M2 polypeptide /FL=gb:NM_001034.1 </td> <td> BE966236 </td> <td> ribonucleotide reductase M2 </td> <td> RRM2 </td> <td> 6241 </td> <td> NM_001034 /// NM_001165931 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0009186 // deoxyribonucleoside diphosphate metabolic process // inferred from electronic annotation /// 0009262 // deoxyribonucleotide metabolic process // inferred from electronic annotation /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from sequence or structural similarity /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from sequence or structural similarity /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation </td> <td> 84.20 </td> <td> 252.50 </td> <td> 2.63 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 43511_s_at </td> <td> 43511_s_at </td> <td> AI201594 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI201594:qc02h12.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-1708487 /clone_end=3' /gb=AI201594 /gi=3754200 /ug=Hs.239333 /len=591 </td> <td> AI201594 </td> <td> arrestin, beta 1 </td> <td> ARRB1 </td> <td> 408 </td> <td> NM_004041 /// NM_020251 /// XM_005273997 /// XM_005273998 /// XM_006718552 /// XM_006718553 /// XM_006718554 /// XM_006718555 </td> <td> 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0002031 // G-protein coupled receptor internalization // inferred from mutant phenotype /// 0002092 // positive regulation of receptor internalization // inferred from mutant phenotype /// 0006309 // apoptotic DNA fragmentation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007602 // phototransduction // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0032717 // negative regulation of interleukin-8 production // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034260 // negative regulation of GTPase activity // inferred from electronic annotation /// 0034393 // positive regulation of smooth muscle cell apoptotic process // inferred from electronic annotation /// 0035025 // positive regulation of Rho protein signal transduction // inferred from mutant phenotype /// 0035066 // positive regulation of histone acetylation // inferred from mutant phenotype /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0042699 // follicle-stimulating hormone signaling pathway // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043149 // stress fiber assembly // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0061024 // membrane organization // traceable author statement /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0090240 // positive regulation of histone H4 acetylation // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0000785 // chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005765 // lysosomal membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004857 // enzyme inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from mutant phenotype /// 0005159 // insulin-like growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from electronic annotation /// 0031434 // mitogen-activated protein kinase kinase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031691 // alpha-1A adrenergic receptor binding // inferred from electronic annotation /// 0031692 // alpha-1B adrenergic receptor binding // inferred from electronic annotation /// 0031701 // angiotensin receptor binding // inferred from physical interaction /// 0031762 // follicle-stimulating hormone receptor binding // inferred from electronic annotation /// 0031896 // V2 vasopressin receptor binding // inferred from electronic annotation /// 0035612 // AP-2 adaptor complex binding // inferred from electronic annotation /// 0035615 // clathrin adaptor activity // inferred from electronic annotation /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from mutant phenotype /// 0044325 // ion channel binding // inferred from electronic annotation /// 0045309 // protein phosphorylated amino acid binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation </td> <td> -86.70 </td> <td> 253.75 </td> <td> -2.63 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218930_s_at </td> <td> 218930_s_at </td> <td> NM_018374 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018374.1 /DEF=Homo sapiens hypothetical protein FLJ11273 (FLJ11273), mRNA. /FEA=mRNA /GEN=FLJ11273 /PROD=hypothetical protein FLJ11273 /DB_XREF=gi:8922965 /UG=Hs.3542 hypothetical protein FLJ11273 /FL=gb:NM_018374.1 </td> <td> NM_018374 </td> <td> transmembrane protein 106B </td> <td> TMEM106B </td> <td> 54664 </td> <td> NM_001134232 /// NM_018374 /// XM_005249789 /// XM_006715749 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0032418 // lysosome localization // inferred from mutant phenotype /// 0048813 // dendrite morphogenesis // inferred from mutant phenotype </td> <td> 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 35.52 </td> <td> 87.49 </td> <td> 2.62 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 207574_s_at </td> <td> 207574_s_at </td> <td> NM_015675 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015675.1 /DEF=Homo sapiens growth arrest and DNA-damage-inducible, beta (GADD45B), mRNA.  /FEA=mRNA /GEN=GADD45B /PROD=DKFZP566B133 protein /DB_XREF=gi:9945331 /UG=Hs.110571 growth arrest and DNA-damage-inducible, beta /FL=gb:AF090950.1 gb:NM_015675.1 </td> <td> NM_015675 </td> <td> growth arrest and DNA-damage-inducible, beta </td> <td> GADD45B </td> <td> 4616 </td> <td> NM_015675 </td> <td> 0000185 // activation of MAPKKK activity // inferred from direct assay /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 1900745 // positive regulation of p38MAPK cascade // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 50.58 </td> <td> 146.51 </td> <td> 2.62 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 207332_s_at </td> <td> 207332_s_at </td> <td> NM_003234 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003234.1 /DEF=Homo sapiens transferrin receptor (p90, CD71) (TFRC), mRNA. /FEA=mRNA /GEN=TFRC /PROD=transferrin receptor (p90, CD71) /DB_XREF=gi:4507456 /UG=Hs.77356 transferrin receptor (p90, CD71) /FL=gb:NM_003234.1 </td> <td> NM_003234 </td> <td> transferrin receptor </td> <td> TFRC </td> <td> 7037 </td> <td> NM_001128148 /// NM_003234 </td> <td> 0001558 // regulation of cell growth // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // non-traceable author statement /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // non-traceable author statement /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0045780 // positive regulation of bone resorption // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0097286 // iron ion import // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0003725 // double-stranded RNA binding // inferred from direct assay /// 0004998 // transferrin receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -144.95 </td> <td> 827.05 </td> <td> -2.62 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212933_x_at </td> <td> 212933_x_at </td> <td> AA961748 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA961748 /FEA=EST /DB_XREF=gi:3133912 /DB_XREF=est:or60d03.s1 /CLONE=IMAGE:1600229 /UG=Hs.180842 ribosomal protein L13 </td> <td> AA961748 </td> <td> ribosomal protein L13 /// small nucleolar RNA, C/D box 68 </td> <td> RPL13 /// SNORD68 </td> <td> 6137 /// 606500 </td> <td> NM_000977 /// NM_001243130 /// NM_001243131 /// NM_033251 /// NR_002450 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022626 // cytosolic ribosome // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -260.75 </td> <td> 1890.12 </td> <td> -2.62 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218102_at </td> <td> 218102_at </td> <td> NM_015954 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015954.1 /DEF=Homo sapiens CGI-26 protein (LOC51071), mRNA. /FEA=mRNA /GEN=LOC51071 /PROD=CGI-26 protein /DB_XREF=gi:7705717 /UG=Hs.24332 CGI-26 protein /FL=gb:AF132960.1 gb:NM_015954.1 </td> <td> NM_015954 </td> <td> deoxyribose-phosphate aldolase (putative) </td> <td> DERA </td> <td> 51071 </td> <td> NM_015954 /// XM_006719083 </td> <td> 0009264 // deoxyribonucleotide catabolic process // inferred from electronic annotation /// 0046121 // deoxyribonucleoside catabolic process // inferred from direct assay /// 0046386 // deoxyribose phosphate catabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004139 // deoxyribose-phosphate aldolase activity // inferred from direct assay /// 0016829 // lyase activity // inferred from electronic annotation </td> <td> 36.58 </td> <td> 193.01 </td> <td> 2.62 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 203332_s_at </td> <td> 203332_s_at </td> <td> NM_005541 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005541.1 /DEF=Homo sapiens inositol polyphosphate-5-phosphatase, 145kD (INPP5D), mRNA.  /FEA=mRNA /GEN=INPP5D /PROD=inositol polyphosphate-5-phosphatase, 145kD /DB_XREF=gi:5031798 /UG=Hs.155939 inositol polyphosphate-5-phosphatase, 145kD /FL=gb:U50040.1 gb:U57650.1 gb:U84400.1 gb:U53470.1 gb:NM_005541.1 </td> <td> NM_005541 </td> <td> inositol polyphosphate-5-phosphatase, 145kDa </td> <td> INPP5D </td> <td> 3635 </td> <td> NM_001017915 /// NM_005541 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0016064 // immunoglobulin mediated immune response // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030853 // negative regulation of granulocyte differentiation // inferred from electronic annotation /// 0030889 // negative regulation of B cell proliferation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045409 // negative regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045579 // positive regulation of B cell differentiation // inferred from electronic annotation /// 0045621 // positive regulation of lymphocyte differentiation // inferred from electronic annotation /// 0045648 // positive regulation of erythrocyte differentiation // inferred from electronic annotation /// 0045656 // negative regulation of monocyte differentiation // inferred from electronic annotation /// 0045659 // negative regulation of neutrophil differentiation // inferred from electronic annotation /// 0045671 // negative regulation of osteoclast differentiation // inferred from electronic annotation /// 0045779 // negative regulation of bone resorption // inferred from electronic annotation /// 0046856 // phosphatidylinositol dephosphorylation // inferred from electronic annotation /// 0050777 // negative regulation of immune response // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050869 // negative regulation of B cell activation // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0004445 // inositol-polyphosphate 5-phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0034594 // phosphatidylinositol trisphosphate phosphatase activity // inferred from electronic annotation /// 0051425 // PTB domain binding // inferred from electronic annotation </td> <td> 51.42 </td> <td> 163.89 </td> <td> 2.62 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200595_s_at </td> <td> 200595_s_at </td> <td> NM_003750 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003750.1 /DEF=Homo sapiens eukaryotic translation initiation factor 3, subunit 10 (theta, 150170kD) (EIF3S10), mRNA.  /FEA=mRNA /GEN=EIF3S10 /PROD=eukaryotic translation initiation factor 3,subunit 10 (theta, 150170kD) /DB_XREF=gi:4503508 /UG=Hs.198899 eukaryotic translation initiation factor 3, subunit 10 (theta, 150170kD) /FL=gb:D50929.1 gb:U58046.1 gb:U78311.1 gb:NM_003750.1 </td> <td> NM_003750 </td> <td> eukaryotic translation initiation factor 3, subunit A </td> <td> EIF3A </td> <td> 8661 </td> <td> NM_003750 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0001732 // formation of translation initiation complex // inferred from direct assay /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation </td> <td> 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -117.53 </td> <td> 635.96 </td> <td> -2.62 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 210024_s_at </td> <td> 210024_s_at </td> <td> AB017644 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB017644.1 /DEF=Homo sapiens mRNA for ubiquitin-conjugating enzyme E2, complete cds.  /FEA=mRNA /GEN=UbcH9 /PROD=ubiquitin-conjugating enzyme E2 /DB_XREF=gi:4586929 /UG=Hs.4890 ubiquitin-conjugating enzyme E2E 3 (homologous to yeast UBC45) /FL=gb:BC003554.1 gb:AB017644.1 gb:AF085362.1 gb:NM_006357.1 </td> <td> AB017644 </td> <td> ubiquitin-conjugating enzyme E2E 3 </td> <td> UBE2E3 </td> <td> 10477 </td> <td> NM_001278554 /// NM_001278555 /// NM_006357 /// NM_182678 /// XM_005246244 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> 78.68 </td> <td> 388.16 </td> <td> 2.61 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 208767_s_at </td> <td> 208767_s_at </td> <td> AW149681 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW149681 /FEA=EST /DB_XREF=gi:6197577 /DB_XREF=est:xf41a10.x1 /CLONE=IMAGE:2620602 /UG=Hs.296398 Homo sapiens mRNA; cDNA DKFZp586E1124 (from clone DKFZp586E1124); complete cds /FL=gb:AL136942.1 </td> <td> AW149681 </td> <td> lysosomal protein transmembrane 4 beta </td> <td> LAPTM4B </td> <td> 55353 </td> <td> NM_018407 </td> <td> 0006810 // transport // inferred from electronic annotation </td> <td> 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 129.10 </td> <td> 540.98 </td> <td> 2.61 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200776_s_at </td> <td> 200776_s_at </td> <td> AL518328 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL518328 /FEA=EST /DB_XREF=gi:12781821 /DB_XREF=est:AL518328 /CLONE=CS0DA009YK18 (3 prime) /UG=Hs.155291 KIAA0005 gene product /FL=gb:D13630.1 gb:NM_014670.1 </td> <td> AL518328 </td> <td> basic leucine zipper and W2 domains 1 </td> <td> BZW1 </td> <td> 9689 </td> <td> NM_001207067 /// NM_001207068 /// NM_001207069 /// NM_014670 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -192.35 </td> <td> 618.65 </td> <td> -2.61 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202446_s_at </td> <td> 202446_s_at </td> <td> AI825926 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI825926 /FEA=EST /DB_XREF=gi:5446597 /DB_XREF=est:to92d05.x1 /CLONE=IMAGE:2185737 /UG=Hs.198282 phospholipid scramblase 1 /FL=gb:NM_021105.1 gb:AB006746.1 gb:AF098642.1 </td> <td> AI825926 </td> <td> phospholipid scramblase 1 </td> <td> PLSCR1 </td> <td> 5359 </td> <td> NM_021105 /// XM_005247538 </td> <td> 0006659 // phosphatidylserine biosynthetic process // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from direct assay /// 0006953 // acute-phase response // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0017121 // phospholipid scrambling // inferred from direct assay /// 0030168 // platelet activation // non-traceable author statement /// 0033003 // regulation of mast cell activation // inferred from sequence or structural similarity /// 0035456 // response to interferon-beta // inferred from mutant phenotype /// 0045071 // negative regulation of viral genome replication // inferred from mutant phenotype /// 0045089 // positive regulation of innate immune response // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051607 // defense response to virus // inferred from mutant phenotype /// 0060368 // regulation of Fc receptor mediated stimulatory signaling pathway // inferred from sequence or structural similarity /// 2000373 // positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005154 // epidermal growth factor receptor binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from direct assay /// 0017128 // phospholipid scramblase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0042609 // CD4 receptor binding // inferred from physical interaction </td> <td> -74.53 </td> <td> 264.91 </td> <td> -2.61 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201161_s_at </td> <td> 201161_s_at </td> <td> NM_003651 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003651.1 /DEF=Homo sapiens cold shock domain protein A (CSDA), mRNA. /FEA=mRNA /GEN=CSDA /PROD=cold shock domain protein A /DB_XREF=gi:4503070 /UG=Hs.1139 cold shock domain protein A /FL=gb:NM_003651.1 </td> <td> NM_003651 </td> <td> Y box binding protein 3 </td> <td> YBX3 </td> <td> 8531 </td> <td> NM_001145426 /// NM_003651 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009409 // response to cold // traceable author statement /// 0009566 // fertilization // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048642 // negative regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0060546 // negative regulation of necroptotic process // inferred from mutant phenotype /// 0060547 // negative regulation of necrotic cell death // inferred from mutant phenotype /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred by curator /// 0071356 // cellular response to tumor necrosis factor // inferred from mutant phenotype /// 0071474 // cellular hyperosmotic response // inferred from mutant phenotype /// 1902219 // negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress // inferred from mutant phenotype /// 2000767 // positive regulation of cytoplasmic translation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005844 // polysome // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -253.03 </td> <td> 634.29 </td> <td> -2.61 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 222047_s_at </td> <td> 222047_s_at </td> <td> AI523895 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI523895 /FEA=EST /DB_XREF=gi:4438030 /DB_XREF=est:tg97g03.x1 /CLONE=IMAGE:2116756 /UG=Hs.111801 arsenate resistance protein ARS2 </td> <td> AI523895 </td> <td> serrate, RNA effector molecule </td> <td> SRRT </td> <td> 51593 </td> <td> NM_001128852 /// NM_001128853 /// NM_001128854 /// NM_015908 /// NM_182800 /// XM_005250405 /// XM_005250406 /// XM_005250407 /// XM_005250408 /// XM_006716023 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from sequence or structural similarity /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031053 // primary miRNA processing // inferred from mutant phenotype /// 0046685 // response to arsenic-containing substance // non-traceable author statement /// 0097150 // neuronal stem cell maintenance // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 69.72 </td> <td> 364.79 </td> <td> 2.61 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 213762_x_at </td> <td> 213762_x_at </td> <td> AI452524 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI452524 /FEA=EST /DB_XREF=gi:4285955 /DB_XREF=est:tj62f01.x1 /CLONE=IMAGE:2146105 /UG=Hs.146381 RNA binding motif protein, X chromosome </td> <td> AI452524 </td> <td> uncharacterized LOC101928747 /// RNA binding motif protein, X-linked /// small nucleolar RNA, C/D box 61 </td> <td> LOC101928747 /// RBMX /// SNORD61 </td> <td> 26787 /// 27316 /// 101928747 </td> <td> NM_001164803 /// NM_002139 /// NR_002735 /// NR_028476 /// NR_028477 /// XR_244543 /// XR_254186 </td> <td> 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from sequence or structural similarity /// 0048026 // positive regulation of mRNA splicing, via spliceosome // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from sequence or structural similarity /// 0071347 // cellular response to interleukin-1 // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // non-traceable author statement /// 0044530 // supraspliceosomal complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001047 // core promoter binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // non-traceable author statement /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -64.73 </td> <td> 365.76 </td> <td> -2.61 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201444_s_at </td> <td> 201444_s_at </td> <td> NM_005765 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005765.1 /DEF=Homo sapiens ATPase, H+ transporting, lysosomal (vacuolar proton pump) membrane sector associated protein M8-9 (APT6M8-9), mRNA.  /FEA=mRNA /GEN=APT6M8-9 /PROD=ATPase, H+ transporting, lysosomal (vacuolarproton pump) membrane sector associated protein M8-9 /DB_XREF=gi:5031590 /UG=Hs.183434 ATPase, H+ transporting, lysosomal (vacuolar proton pump) membrane sector associated protein M8-9 /FL=gb:AF248966.1 gb:NM_005765.1 </td> <td> NM_005765 </td> <td> ATPase, H+ transporting, lysosomal accessory protein 2 </td> <td> ATP6AP2 </td> <td> 10159 </td> <td> NM_005765 </td> <td> 0002003 // angiotensin maturation // inferred from direct assay /// 0002003 // angiotensin maturation // traceable author statement /// 0006508 // proteolysis // not recorded /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0021903 // rostrocaudal neural tube patterning // inferred from mutant phenotype /// 0030177 // positive regulation of Wnt signaling pathway // inferred from mutant phenotype /// 0032914 // positive regulation of transforming growth factor beta1 production // inferred from direct assay /// 0043408 // regulation of MAPK cascade // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048069 // eye pigmentation // inferred from mutant phenotype /// 0060323 // head morphogenesis // inferred from mutant phenotype </td> <td> 0005886 // plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004190 // aspartic-type endopeptidase activity // not recorded /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation </td> <td> -65.15 </td> <td> 376.80 </td> <td> -2.60 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201111_at </td> <td> 201111_at </td> <td> AF053641 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF053641.1 /DEF=Homo sapiens brain cellular apoptosis susceptibility protein (CSE1) mRNA, complete cds.  /FEA=mRNA /GEN=CSE1 /PROD=cellular apoptosis susceptibility protein /DB_XREF=gi:3560556 /UG=Hs.90073 chromosome segregation 1 (yeast homolog)-like /FL=gb:U33286.1 gb:AF053641.1 gb:NM_001316.1 </td> <td> AF053641 </td> <td> CSE1 chromosome segregation 1-like (yeast) </td> <td> CSE1L </td> <td> 1434 </td> <td> NM_001256135 /// NM_001316 /// NM_177436 /// NR_045796 </td> <td> 0006611 // protein export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008262 // importin-alpha export receptor activity // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation </td> <td> 43.02 </td> <td> 216.14 </td> <td> 2.60 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202378_s_at </td> <td> 202378_s_at </td> <td> NM_017526 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017526.1 /DEF=Homo sapiens leptin receptor gene-related protein (HSOBRGRP), mRNA. /FEA=mRNA /GEN=HSOBRGRP /PROD=leptin receptor gene-related protein /DB_XREF=gi:8923784 /UG=Hs.23581 leptin receptor gene-related protein /FL=gb:NM_017526.1 </td> <td> NM_017526 </td> <td> leptin receptor overlapping transcript </td> <td> LEPROT </td> <td> 54741 </td> <td> NM_001198681 /// NM_001198683 /// NM_017526 </td> <td> 0046426 // negative regulation of JAK-STAT cascade // inferred from direct assay /// 0060400 // negative regulation of growth hormone receptor signaling pathway // inferred from direct assay /// 2000009 // negative regulation of protein localization to cell surface // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005102 // receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 71.75 </td> <td> 320.55 </td> <td> 2.60 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 211404_s_at </td> <td> 211404_s_at </td> <td> BC004371 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004371.1 /DEF=Homo sapiens, clone MGC:10449, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:10449) /DB_XREF=gi:13325115 /UG=Hs.279518 amyloid beta (A4) precursor-like protein 2 /FL=gb:BC004371.1 </td> <td> BC004371 </td> <td> amyloid beta (A4) precursor-like protein 2 </td> <td> APLP2 </td> <td> 334 </td> <td> NM_001142276 /// NM_001142277 /// NM_001142278 /// NM_001243299 /// NM_001642 /// NR_024515 /// NR_024516 </td> <td> 0001967 // suckling behavior // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046914 // transition metal ion binding // inferred from electronic annotation </td> <td> -65.27 </td> <td> 665.46 </td> <td> -2.60 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 206780_at </td> <td> 206780_at </td> <td> NM_000818 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000818.1 /DEF=Homo sapiens glutamate decarboxylase 2 (pancreatic islets and brain, 65kD) (GAD2), mRNA.  /FEA=mRNA /GEN=GAD2 /PROD=glutamate decarboxylase 2 /DB_XREF=gi:4503874 /UG=Hs.170808 glutamate decarboxylase 2 (pancreatic islets and brain, 65kD) /FL=gb:M74826.1 gb:NM_000818.1 </td> <td> NM_000818 </td> <td> glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) </td> <td> GAD2 </td> <td> 2572 </td> <td> NM_000818 /// NM_001134366 </td> <td> 0006540 // glutamate decarboxylation to succinate // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0019752 // carboxylic acid metabolic process // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0061202 // clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004351 // glutamate decarboxylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016595 // glutamate binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 37.03 </td> <td> 41.76 </td> <td> 2.60 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 213535_s_at </td> <td> 213535_s_at </td> <td> AA910614 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA910614 /FEA=EST /DB_XREF=gi:3049904 /DB_XREF=est:ok61b04.s1 /CLONE=IMAGE:1518415 /UG=Hs.84285 ubiquitin-conjugating enzyme E2I (homologous to yeast UBC9) </td> <td> AA910614 </td> <td> ubiquitin-conjugating enzyme E2I </td> <td> UBE2I </td> <td> 7329 </td> <td> NM_003345 /// NM_194259 /// NM_194260 /// NM_194261 /// XM_005255540 /// XM_005255541 /// XM_006720938 /// XM_006720939 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0016925 // protein sumoylation // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0033145 // positive regulation of intracellular steroid hormone receptor signaling pathway // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000795 // synaptonemal complex // traceable author statement /// 0001650 // fibrillar center // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0043398 // HLH domain binding // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0071535 // RING-like zinc finger domain binding // inferred from physical interaction </td> <td> -262.35 </td> <td> 995.77 </td> <td> -2.60 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 214728_x_at </td> <td> 214728_x_at </td> <td> AK026573 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026573.1 /DEF=Homo sapiens cDNA: FLJ22920 fis, clone KAT06686, highly similar to HSU29175 Human transcriptional activator (BRG1) mRNA.  /FEA=mRNA /DB_XREF=gi:10439456 /UG=Hs.78202 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 </td> <td> AK026573 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 </td> <td> SMARCA4 </td> <td> 6597 </td> <td> NM_001128844 /// NM_001128845 /// NM_001128846 /// NM_001128847 /// NM_001128848 /// NM_001128849 /// NM_003072 /// XM_005260028 /// XM_005260030 /// XM_005260031 /// XM_005260032 /// XM_005260033 /// XM_005260034 /// XM_005260035 /// XM_006722845 /// XM_006722846 /// XM_006722847 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001832 // blastocyst growth // inferred from electronic annotation /// 0001835 // blastocyst hatching // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003407 // neural retina development // inferred from expression pattern /// 0006200 // ATP catabolic process // inferred from genetic interaction /// 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred by curator /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0007070 // negative regulation of transcription from RNA polymerase II promoter during mitosis // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007403 // glial cell fate determination // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010424 // DNA methylation on cytosine within a CG sequence // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030900 // forebrain development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035887 // aortic smooth muscle cell differentiation // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0043923 // positive regulation by host of viral transcription // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048562 // embryonic organ morphogenesis // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0060318 // definitive erythrocyte differentiation // inferred from electronic annotation /// 0060347 // heart trabecula formation // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005719 // nuclear euchromatin // inferred from electronic annotation /// 0005726 // perichromatin fibrils // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from sequence or structural similarity /// 0071778 // WINAC complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // inferred from genetic interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042393 // histone binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction /// 0070577 // lysine-acetylated histone binding // inferred from direct assay </td> <td> 72.20 </td> <td> 244.05 </td> <td> 2.60 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201569_s_at </td> <td> 201569_s_at </td> <td> NM_015380 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015380.1 /DEF=Homo sapiens CGI-51 protein (CGI-51), mRNA. /FEA=mRNA /GEN=CGI-51 /PROD=CGI-51 protein /DB_XREF=gi:7661541 /UG=Hs.4877 CGI-51 protein /FL=gb:AF151809.1 gb:NM_015380.1 </td> <td> NM_015380 </td> <td> SAMM50 sorting and assembly machinery component </td> <td> SAMM50 </td> <td> 25813 </td> <td> NM_015380 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045040 // protein import into mitochondrial outer membrane // inferred from direct assay </td> <td> 0001401 // mitochondrial sorting and assembly machinery complex // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0019867 // outer membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 33.20 </td> <td> 132.62 </td> <td> 2.60 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202315_s_at </td> <td> 202315_s_at </td> <td> NM_004327 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004327.2 /DEF=Homo sapiens breakpoint cluster region (BCR), transcript variant 1, mRNA.  /FEA=mRNA /GEN=BCR /PROD=breakpoint cluster region, isoform 1 /DB_XREF=gi:11038638 /UG=Hs.234799 breakpoint cluster region /FL=gb:NM_004327.2 </td> <td> NM_004327 </td> <td> breakpoint cluster region </td> <td> BCR </td> <td> 613 </td> <td> NM_004327 /// NM_021574 </td> <td> 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0043314 // negative regulation of neutrophil degranulation // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0030675 // Rac GTPase activator activity // inferred from electronic annotation </td> <td> -83.80 </td> <td> 261.75 </td> <td> -2.60 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 203437_at </td> <td> 203437_at </td> <td> NM_003876 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003876.1 /DEF=Homo sapiens putative receptor protein (PMI), mRNA. /FEA=mRNA /GEN=PMI /PROD=putative receptor protein /DB_XREF=gi:4505900 /UG=Hs.15196 putative receptor protein /FL=gb:BC002819.1 gb:BC005268.1 gb:NM_003876.1 </td> <td> NM_003876 </td> <td> transmembrane protein 11 </td> <td> TMEM11 </td> <td> 8834 </td> <td> NM_003876 /// NR_024547 </td> <td> 0007005 // mitochondrion organization // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031305 // integral component of mitochondrial inner membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 26.22 </td> <td> 98.49 </td> <td> 2.60 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201061_s_at </td> <td> 201061_s_at </td> <td> M81635 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M81635.1 /DEF=Homo sapiens erythrocyte membrane protein mRNA, complete cds. /FEA=mRNA /GEN=stomatin peptide /PROD=stomatin peptide /DB_XREF=gi:181183 /UG=Hs.160483 erythrocyte membrane protein band 7.2 (stomatin) /FL=gb:M81635.1 gb:NM_004099.1 </td> <td> M81635 </td> <td> stomatin </td> <td> STOM </td> <td> 2040 </td> <td> NM_001270526 /// NM_001270527 /// NM_004099 /// NM_198194 /// NR_073037 </td> <td> 0051260 // protein homooligomerization // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> 142.55 </td> <td> 461.30 </td> <td> 2.60 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 213088_s_at </td> <td> 213088_s_at </td> <td> BE551340 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE551340 /FEA=EST /DB_XREF=gi:9793032 /DB_XREF=est:7b63c12.x1 /CLONE=IMAGE:3232918 /UG=Hs.44131 KIAA0974 protein </td> <td> BE551340 </td> <td> DnaJ (Hsp40) homolog, subfamily C, member 9 </td> <td> DNAJC9 </td> <td> 23234 </td> <td> NM_015190 /// XM_006717734 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0035176 // social behavior // inferred from expression pattern </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation </td> <td> 62.95 </td> <td> 259.43 </td> <td> 2.60 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218205_s_at </td> <td> 218205_s_at </td> <td> NM_017572 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017572.1 /DEF=Homo sapiens G protein-coupled receptor kinase 7 (GPRK7), mRNA. /FEA=mRNA /GEN=GPRK7 /PROD=G protein-coupled receptor kinase 7 /DB_XREF=gi:9994196 /UG=Hs.261828 G protein-coupled receptor kinase 7 /FL=gb:AF237776.1 gb:AF125532.1 gb:NM_017572.1 </td> <td> NM_017572 </td> <td> MAP kinase interacting serine/threonine kinase 2 </td> <td> MKNK2 </td> <td> 2872 </td> <td> NM_017572 /// NM_199054 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0071243 // cellular response to arsenic-containing substance // inferred from direct assay /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 93.57 </td> <td> 247.99 </td> <td> 2.60 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 203882_at </td> <td> 203882_at </td> <td> NM_006084 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006084.1 /DEF=Homo sapiens interferon-stimulated transcription factor 3, gamma (48kD) (ISGF3G), mRNA.  /FEA=mRNA /GEN=ISGF3G /PROD=interferon-stimulated transcription factor 3,gamma (48kD) /DB_XREF=gi:5174474 /UG=Hs.1706 interferon-stimulated transcription factor 3, gamma (48kD) /FL=gb:M87503.1 gb:NM_006084.1 </td> <td> NM_006084 </td> <td> interferon regulatory factor 9 </td> <td> IRF9 </td> <td> 10379 </td> <td> NM_006084 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0023035 // CD40 signaling pathway // inferred from sequence or structural similarity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0045351 // type I interferon biosynthetic process // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0097039 // protein linear polyubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0009898 // cytoplasmic side of plasma membrane // inferred from sequence or structural similarity /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0071797 // LUBAC complex // inferred from direct assay /// 0071797 // LUBAC complex // inferred from electronic annotation </td> <td> 0000975 // regulatory region DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -44.08 </td> <td> 100.11 </td> <td> -2.59 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202443_x_at </td> <td> 202443_x_at </td> <td> AA291203 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA291203 /FEA=EST /DB_XREF=gi:1939386 /DB_XREF=est:zt38h02.s1 /CLONE=IMAGE:724659 /UG=Hs.8121 Notch (Drosophila) homolog 2 /FL=gb:AF315356.1 gb:NM_024408.1 </td> <td> AA291203 </td> <td> notch 2 </td> <td> NOTCH2 </td> <td> 4853 </td> <td> NM_001200001 /// NM_024408 /// XM_005270901 /// XM_005270902 /// XM_006710667 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001709 // cell fate determination // traceable author statement /// 0001890 // placenta development // inferred from electronic annotation /// 0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0002437 // inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0003184 // pulmonary valve morphogenesis // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009887 // organ morphogenesis // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016049 // cell growth // inferred from direct assay /// 0019827 // stem cell maintenance // traceable author statement /// 0030097 // hemopoiesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030522 // intracellular receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0046579 // positive regulation of Ras protein signal transduction // inferred from direct assay /// 0046849 // bone remodeling // inferred from mutant phenotype /// 0050793 // regulation of developmental process // inferred from electronic annotation /// 0060413 // atrial septum morphogenesis // inferred from mutant phenotype /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0061314 // Notch signaling involved in heart development // inferred by curator /// 0072602 // interleukin-4 secretion // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0004872 // receptor activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0038049 // ligand-activated RNA polymerase II transcription factor binding transcription factor activity // traceable author statement </td> <td> -78.95 </td> <td> 301.93 </td> <td> -2.59 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 221781_s_at </td> <td> 221781_s_at </td> <td> BG168666 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG168666 /FEA=EST /DB_XREF=gi:12675369 /DB_XREF=est:602319904F1 /CLONE=IMAGE:4415256 /UG=Hs.1098 DKFZp434J1813 protein </td> <td> BG168666 </td> <td> DnaJ (Hsp40) homolog, subfamily C, member 10 </td> <td> DNAJC10 </td> <td> 54431 </td> <td> NM_001271581 /// NM_018981 /// NR_073365 /// NR_073366 /// NR_073367 </td> <td> 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006261 // DNA-dependent DNA replication // inferred from electronic annotation /// 0006304 // DNA modification // inferred from electronic annotation /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0032781 // positive regulation of ATPase activity // inferred from sequence or structural similarity /// 0034975 // protein folding in endoplasmic reticulum // inferred from direct assay /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0034663 // endoplasmic reticulum chaperone complex // inferred from direct assay </td> <td> 0001671 // ATPase activator activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003912 // DNA nucleotidylexotransferase activity // inferred from electronic annotation /// 0003912 // DNA nucleotidylexotransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from direct assay /// 0015035 // protein disulfide oxidoreductase activity // inferred from sequence or structural similarity /// 0015036 // disulfide oxidoreductase activity // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016671 // oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor // inferred from sequence or structural similarity /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from direct assay /// 0051117 // ATPase binding // inferred from physical interaction /// 0051787 // misfolded protein binding // inferred from direct assay </td> <td> -43.20 </td> <td> 204.72 </td> <td> -2.59 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 216959_x_at </td> <td> 216959_x_at </td> <td> U55258 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U55258 /DEF=Human hBRAVONr-CAM precursor (hBRAVONr-CAM) gene, complete cds /FEA=CDS /DB_XREF=gi:1621282 /UG=Hs.7912 neuronal cell adhesion molecule </td> <td> U55258 </td> <td> neuronal cell adhesion molecule </td> <td> NRCAM </td> <td> 4897 </td> <td> NM_001037132 /// NM_001037133 /// NM_001193582 /// NM_001193583 /// NM_001193584 /// NM_005010 /// XM_005250373 /// XM_005250380 /// XM_005250383 /// XM_005250385 /// XM_006716003 /// XM_006716004 /// XM_006716005 /// XM_006716006 /// XM_006716007 /// XM_006716008 /// XM_006716009 /// XM_006716010 /// XM_006716011 /// XM_006716012 /// XM_006716013 /// XM_006716014 /// XR_428177 /// XR_428178 </td> <td> 0001525 // angiogenesis // inferred from expression pattern /// 0001764 // neuron migration // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007409 // axonogenesis // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007413 // axonal fasciculation // non-traceable author statement /// 0007416 // synapse assembly // traceable author statement /// 0007417 // central nervous system development // non-traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // non-traceable author statement /// 0019227 // neuronal action potential propagation // inferred from electronic annotation /// 0030516 // regulation of axon extension // non-traceable author statement /// 0031290 // retinal ganglion cell axon guidance // inferred from electronic annotation /// 0034113 // heterotypic cell-cell adhesion // inferred from electronic annotation /// 0045162 // clustering of voltage-gated sodium channels // inferred from direct assay /// 0045666 // positive regulation of neuron differentiation // non-traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043005 // neuron projection // non-traceable author statement /// 0043194 // axon initial segment // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030506 // ankyrin binding // inferred from direct assay /// 0086080 // protein binding involved in heterotypic cell-cell adhesion // inferred from electronic annotation </td> <td> -70.97 </td> <td> 129.59 </td> <td> -2.59 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 204049_s_at </td> <td> 204049_s_at </td> <td> NM_014721 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014721.1 /DEF=Homo sapiens KIAA0680 gene product (KIAA0680), mRNA. /FEA=mRNA /GEN=KIAA0680 /PROD=KIAA0680 gene product /DB_XREF=gi:7662247 /UG=Hs.102471 KIAA0680 gene product /FL=gb:AB014580.1 gb:NM_014721.1 </td> <td> NM_014721 </td> <td> phosphatase and actin regulator 2 </td> <td> PHACTR2 </td> <td> 9749 </td> <td> NM_001100164 /// NM_001100165 /// NM_001100166 /// NM_014721 </td> <td> 0043086 // negative regulation of catalytic activity // inferred from electronic annotation </td> <td>  </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 65.05 </td> <td> 287.73 </td> <td> 2.59 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212284_x_at </td> <td> 212284_x_at </td> <td> BG498776 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG498776 /FEA=EST /DB_XREF=gi:13460293 /DB_XREF=est:602544416F1 /CLONE=IMAGE:4666995 /UG=Hs.326456 hypothetical protein FLJ20030 </td> <td> BG498776 </td> <td> uncharacterized LOC101928826 /// tumor protein, translationally-controlled 1 </td> <td> LOC101928826 /// TPT1 </td> <td> 7178 /// 101928826 </td> <td> NM_001286272 /// NM_001286273 /// NM_003295 /// XR_242670 /// XR_250536 /// XR_252641 </td> <td> 0006816 // calcium ion transport // inferred by curator /// 0006874 // cellular calcium ion homeostasis // inferred by curator /// 0009615 // response to virus // inferred from expression pattern /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 1902230 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage // inferred from mutant phenotype /// 2000384 // negative regulation of ectoderm development // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005771 // multivesicular body // inferred from direct assay /// 0045298 // tubulin complex // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -877.15 </td> <td> 4537.65 </td> <td> -2.59 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 203534_at </td> <td> 203534_at </td> <td> NM_014462 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014462.1 /DEF=Homo sapiens Lsm1 protein (LSM1), mRNA. /FEA=mRNA /GEN=LSM1 /PROD=Lsm1 protein /DB_XREF=gi:7657312 /UG=Hs.111783 Lsm1 protein /FL=gb:BC001767.1 gb:AF000177.1 gb:NM_014462.1 </td> <td> NM_014462 </td> <td> LSM1, U6 small nuclear RNA associated </td> <td> LSM1 </td> <td> 27257 </td> <td> NM_014462 /// NR_045492 /// NR_045493 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0071044 // histone mRNA catabolic process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 70.18 </td> <td> 281.76 </td> <td> 2.59 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 210908_s_at </td> <td> 210908_s_at </td> <td> AB055804 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB055804.1 /DEF=Homo sapiens mRNA for MM-1 beta, complete cds. /FEA=mRNA /GEN=mm-1 /PROD=MM-1 beta /DB_XREF=gi:12957174 /UG=Hs.288856 prefoldin 5 /FL=gb:AB055804.1 </td> <td> AB055804 </td> <td> prefoldin subunit 5 </td> <td> PFDN5 </td> <td> 5204 </td> <td> NM_002624 /// NM_145896 /// NM_145897 </td> <td> 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016272 // prefoldin complex // inferred from electronic annotation </td> <td> 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 84.80 </td> <td> 596.83 </td> <td> 2.59 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 208825_x_at </td> <td> 208825_x_at </td> <td> U43701 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U43701.1 /DEF=Human ribosomal protein L23a mRNA, complete cds. /FEA=mRNA /PROD=ribosomal protein L23a /DB_XREF=gi:1399085 /UG=Hs.184776 ribosomal protein L23a /FL=gb:U43701.1 </td> <td> U43701 </td> <td> ribosomal protein L23a /// small nucleolar RNA, C/D box 42A </td> <td> RPL23A /// SNORD42A </td> <td> 6147 /// 26809 </td> <td> NM_000984 /// NR_000014 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031932 // TORC2 complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1189.23 </td> <td> 5429.59 </td> <td> -2.59 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 208709_s_at </td> <td> 208709_s_at </td> <td> U64898 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U64898.1 /DEF=Homo sapiens NRD convertase mRNA, complete cds. /FEA=mRNA /PROD=NRD convertase /DB_XREF=gi:2897866 /UG=Hs.4099 nardilysin (N-arginine dibasic convertase) /FL=gb:U64898.1 </td> <td> U64898 </td> <td> nardilysin (N-arginine dibasic convertase) </td> <td> NRD1 </td> <td> 4898 </td> <td> NM_001101662 /// NM_001242361 /// NM_002525 /// XM_005270903 </td> <td> 0006508 // proteolysis // non-traceable author statement /// 0007528 // neuromuscular junction development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0016477 // cell migration // traceable author statement /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from direct assay /// 0052548 // regulation of endopeptidase activity // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009986 // cell surface // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048408 // epidermal growth factor binding // traceable author statement </td> <td> -36.15 </td> <td> 263.70 </td> <td> -2.58 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218304_s_at </td> <td> 218304_s_at </td> <td> NM_022776 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022776.1 /DEF=Homo sapiens hypothetical protein FLJ13164 (FLJ13164), mRNA. /FEA=mRNA /GEN=FLJ13164 /PROD=hypothetical protein FLJ13164 /DB_XREF=gi:12232460 /UG=Hs.61260 hypothetical protein FLJ13164 /FL=gb:NM_022776.1 </td> <td> NM_022776 </td> <td> oxysterol binding protein-like 11 </td> <td> OSBPL11 </td> <td> 114885 </td> <td> NM_022776 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0010890 // positive regulation of sequestering of triglyceride // inferred from mutant phenotype /// 0045444 // fat cell differentiation // inferred from mutant phenotype </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation </td> <td> 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation </td> <td> 37.12 </td> <td> 67.74 </td> <td> 2.58 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200756_x_at </td> <td> 200756_x_at </td> <td> U67280 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U67280.1 /DEF=Homo sapiens calumenin mRNA, complete cds. /FEA=mRNA /PROD=calumenin /DB_XREF=gi:2809323 /UG=Hs.7753 calumenin /FL=gb:U67280.1 gb:AF013759.1 gb:NM_001219.2 </td> <td> U67280 </td> <td> calumenin </td> <td> CALU </td> <td> 813 </td> <td> NM_001130674 /// NM_001199671 /// NM_001199672 /// NM_001199673 /// NM_001199674 /// NM_001219 /// NR_074086 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0033018 // sarcoplasmic reticulum lumen // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 100.55 </td> <td> 306.60 </td> <td> 2.58 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 211065_x_at </td> <td> 211065_x_at </td> <td> BC006422 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006422.1 /DEF=Homo sapiens, clone MGC:12724, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:12724) /DB_XREF=gi:13623608 /FL=gb:BC006422.1 </td> <td> BC006422 </td> <td> phosphofructokinase, liver </td> <td> PFKL </td> <td> 5211 </td> <td> NM_001002021 /// NM_002626 /// NR_024108 /// XM_005261135 /// XM_005261136 /// XM_005261137 /// XM_006724011 /// XM_006724012 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006002 // fructose 6-phosphate metabolic process // inferred from direct assay /// 0006002 // fructose 6-phosphate metabolic process // inferred from mutant phenotype /// 0006006 // glucose metabolic process // traceable author statement /// 0006096 // glycolytic process // inferred from direct assay /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009749 // response to glucose // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030388 // fructose 1,6-bisphosphate metabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0046835 // carbohydrate phosphorylation // inferred from direct assay /// 0046835 // carbohydrate phosphorylation // inferred from electronic annotation /// 0046835 // carbohydrate phosphorylation // inferred from mutant phenotype /// 0051259 // protein oligomerization // inferred from direct assay /// 0051289 // protein homotetramerization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005945 // 6-phosphofructokinase complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003872 // 6-phosphofructokinase activity // inferred from direct assay /// 0003872 // 6-phosphofructokinase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048029 // monosaccharide binding // inferred from electronic annotation /// 0070061 // fructose binding // inferred from direct assay /// 0070095 // fructose-6-phosphate binding // inferred from direct assay </td> <td> -62.75 </td> <td> 205.85 </td> <td> -2.58 </td> <td> 0.03 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 211123_at </td> <td> 211123_at </td> <td> D87920 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D87920.1 /DEF=Homo sapiens mRNA for sodium iodide symporter, complete cds. /FEA=mRNA /PROD=sodium iodide symporter /DB_XREF=gi:2887404 /UG=Hs.103983 solute carrier family 5 (sodium iodide symporter), member 5 /FL=gb:U66088.1 gb:D87920.1 gb:NM_000453.1 </td> <td> D87920 </td> <td> solute carrier family 5 (sodium/iodide cotransporter), member 5 </td> <td> SLC5A5 </td> <td> 6528 </td> <td> NM_000453 /// XM_005260024 </td> <td> 0006590 // thyroid hormone generation // traceable author statement /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0015705 // iodide transport // inferred from mutant phenotype /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071320 // cellular response to cAMP // inferred from expression pattern /// 0071371 // cellular response to gonadotropin stimulus // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0008507 // sodium:iodide symporter activity // inferred from electronic annotation /// 0015111 // iodide transmembrane transporter activity // inferred from mutant phenotype /// 0015293 // symporter activity // inferred from electronic annotation </td> <td> -42.60 </td> <td> 81.70 </td> <td> -2.58 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 207842_s_at </td> <td> 207842_s_at </td> <td> NM_007359 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007359.1 /DEF=Homo sapiens MLN51 protein (MLN51), mRNA. /FEA=mRNA /GEN=MLN51 /PROD=MLN51 protein /DB_XREF=gi:6678887 /UG=Hs.83422 MLN51 protein /FL=gb:NM_007359.1 </td> <td> NM_007359 </td> <td> cancer susceptibility candidate 3 /// microRNA 6866 </td> <td> CASC3 /// MIR6866 </td> <td> 22794 /// 102466986 </td> <td> NM_007359 /// NR_106926 /// XM_005257163 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0008298 // intracellular mRNA localization // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 36.05 </td> <td> 115.58 </td> <td> 2.58 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201925_s_at </td> <td> 201925_s_at </td> <td> NM_000574 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000574.1 /DEF=Homo sapiens decay accelerating factor for complement (CD55, Cromer blood group system) (DAF), mRNA.  /FEA=mRNA /GEN=DAF /PROD=decay accelerating factor for complement (CD55,Cromer blood group system) /DB_XREF=gi:10835142 /UG=Hs.1369 decay accelerating factor for complement (CD55, Cromer blood group system) /FL=gb:NM_000574.1 gb:BC001288.1 gb:M31516.1 </td> <td> NM_000574 </td> <td> CD55 molecule, decay accelerating factor for complement (Cromer blood group) </td> <td> CD55 </td> <td> 1604 </td> <td> NM_000574 /// NM_001114543 /// NM_001114544 /// NM_001114752 /// XM_005273077 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from direct assay /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0031664 // regulation of lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0035743 // CD4-positive, alpha-beta T cell cytokine production // inferred from direct assay /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045730 // respiratory burst // non-traceable author statement /// 0045916 // negative regulation of complement activation // inferred from direct assay /// 0060137 // maternal process involved in parturition // inferred from electronic annotation /// 2000516 // positive regulation of CD4-positive, alpha-beta T cell activation // inferred from direct assay /// 2000563 // positive regulation of CD4-positive, alpha-beta T cell proliferation // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from direct assay /// 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from direct assay </td> <td> 114.90 </td> <td> 326.02 </td> <td> 2.58 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218927_s_at </td> <td> 218927_s_at </td> <td> NM_018641 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018641.1 /DEF=Homo sapiens chondroitin 4-O-sulfotransferase 2 (C4S-2), mRNA. /FEA=mRNA /GEN=C4S-2 /PROD=chondroitin 4-O-sulfotransferase 2 /DB_XREF=gi:8922111 /UG=Hs.25204 chondroitin 4-O-sulfotransferase 2 /FL=gb:BC002918.1 gb:NM_018641.1 gb:AF239822.1 </td> <td> NM_018641 </td> <td> carbohydrate (chondroitin 4) sulfotransferase 12 </td> <td> CHST12 </td> <td> 55501 </td> <td> NM_001243794 /// NM_001243795 /// NM_018641 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // inferred from direct assay /// 0030206 // chondroitin sulfate biosynthetic process // traceable author statement /// 0030208 // dermatan sulfate biosynthetic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030173 // integral component of Golgi membrane // non-traceable author statement </td> <td> 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from direct assay /// 0050656 // 3'-phosphoadenosine 5'-phosphosulfate binding // non-traceable author statement </td> <td> 55.65 </td> <td> 83.83 </td> <td> 2.58 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218396_at </td> <td> 218396_at </td> <td> NM_017684 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017684.1 /DEF=Homo sapiens hypothetical protein FLJ20136 (FLJ20136), mRNA. /FEA=mRNA /GEN=FLJ20136 /PROD=hypothetical protein FLJ20136 /DB_XREF=gi:8923138 /UG=Hs.24817 hypothetical protein FLJ20136 /FL=gb:NM_017684.1 </td> <td> NM_017684 </td> <td> vacuolar protein sorting 13 homolog C (S. cerevisiae) </td> <td> VPS13C </td> <td> 54832 </td> <td> NM_001018088 /// NM_017684 /// NM_018080 /// NM_020821 </td> <td>  </td> <td> 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> -53.55 </td> <td> 204.95 </td> <td> -2.58 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 213883_s_at </td> <td> 213883_s_at </td> <td> AA012917 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA012917 /FEA=EST /DB_XREF=gi:1473944 /DB_XREF=est:ze27c03.s1 /CLONE=IMAGE:360196 /UG=Hs.180532 glucose phosphate isomerase </td> <td> AA012917 </td> <td> TM2 domain containing 1 </td> <td> TM2D1 </td> <td> 83941 </td> <td> NM_032027 /// XM_005271250 /// XR_246299 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0001540 // beta-amyloid binding // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation </td> <td> 85.68 </td> <td> 187.51 </td> <td> 2.58 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 217765_at </td> <td> 217765_at </td> <td> NM_013392 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013392.1 /DEF=Homo sapiens nuclear receptor binding protein (NRBP), mRNA. /FEA=mRNA /GEN=NRBP /PROD=nuclear receptor binding protein /DB_XREF=gi:7019332 /UG=Hs.272736 nuclear receptor binding protein /FL=gb:BC001221.1 gb:AF113249.1 gb:NM_013392.1 </td> <td> NM_013392 </td> <td> nuclear receptor binding protein 1 </td> <td> NRBP1 </td> <td> 29959 </td> <td> NM_013392 /// XM_005264274 /// XM_006711999 </td> <td> 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity </td> <td> 31.98 </td> <td> 109.69 </td> <td> 2.57 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202749_at </td> <td> 202749_at </td> <td> NM_004627 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004627.1 /DEF=Homo sapiens tryptophan rich basic protein (WRB), mRNA. /FEA=mRNA /GEN=WRB /PROD=tryptophan rich basic protein /DB_XREF=gi:4759325 /UG=Hs.198308 tryptophan rich basic protein /FL=gb:NM_004627.1 </td> <td> NM_004627 </td> <td> tryptophan rich basic protein </td> <td> WRB </td> <td> 7485 </td> <td> NM_001146218 /// NM_004627 /// XM_005261059 /// XM_005261060 /// XM_005261061 </td> <td> 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 46.92 </td> <td> 280.04 </td> <td> 2.57 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201164_s_at </td> <td> 201164_s_at </td> <td> BG474429 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG474429 /FEA=EST /DB_XREF=gi:13406706 /DB_XREF=est:602517152F1 /CLONE=IMAGE:4648765 /UG=Hs.153834 pumilio (Drosophila) homolog 1 /FL=gb:AF315592.1 gb:NM_014676.1 </td> <td> BG474429 </td> <td> pumilio RNA-binding family member 1 </td> <td> PUM1 </td> <td> 9698 </td> <td> NM_001020658 /// NM_014676 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -46.45 </td> <td> 162.85 </td> <td> -2.57 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 210434_x_at </td> <td> 210434_x_at </td> <td> AF151056 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF151056.1 /DEF=Homo sapiens HSPC222 mRNA, complete cds. /FEA=mRNA /PROD=HSPC222 /DB_XREF=gi:7106833 /UG=Hs.323093 Homo sapiens, jumping translocation breakpoint, clone MGC:10274, mRNA, complete cds /FL=gb:AF151056.1 </td> <td> AF151056 </td> <td> jumping translocation breakpoint </td> <td> JTB </td> <td> 10899 </td> <td> NM_006694 </td> <td> 0000910 // cytokinesis // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from mutant phenotype /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay </td> <td> 0019901 // protein kinase binding // inferred from direct assay </td> <td> 87.08 </td> <td> 827.04 </td> <td> 2.57 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 219052_at </td> <td> 219052_at </td> <td> NM_024747 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024747.1 /DEF=Homo sapiens hypothetical protein FLJ22501 (FLJ22501), mRNA. /FEA=mRNA /GEN=FLJ22501 /PROD=hypothetical protein FLJ22501 /DB_XREF=gi:13376073 /UG=Hs.125133 hypothetical protein FLJ22501 /FL=gb:NM_024747.1 </td> <td> NM_024747 </td> <td> Hermansky-Pudlak syndrome 6 </td> <td> HPS6 </td> <td> 79803 </td> <td> NM_024747 </td> <td> 0006996 // organelle organization // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation /// 0072657 // protein localization to membrane // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031084 // BLOC-2 complex // inferred from physical interaction /// 0031090 // organelle membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from physical interaction /// 0030742 // GTP-dependent protein binding // inferred from physical interaction </td> <td> 31.05 </td> <td> 118.80 </td> <td> 2.57 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200719_at </td> <td> 200719_at </td> <td> BE964043 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE964043 /FEA=EST /DB_XREF=gi:11767371 /DB_XREF=est:601657616R1 /CLONE=IMAGE:3875955 /UG=Hs.171626 transcription elongation factor B (SIII), polypeptide 1-like /FL=gb:NM_003197.2 </td> <td> BE964043 </td> <td> S-phase kinase-associated protein 1 </td> <td> SKP1 </td> <td> 6500 </td> <td> NM_006930 /// NM_170679 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0031467 // Cul7-RING ubiquitin ligase complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 34.22 </td> <td> 106.29 </td> <td> 2.57 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200068_s_at </td> <td> 200068_s_at </td> <td> M94859 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M94859.1 /DEF=Human calnexin mRNA, complete cds. /FEA=mRNA /PROD=calnexin /DB_XREF=gi:179831 /UG=Hs.155560 calnexin /FL=gb:NM_001746.1 gb:BC003552.1 gb:M94859.1 gb:M98452.1 gb:L10284.1 gb:L18887.1 </td> <td> M94859 </td> <td> calnexin </td> <td> CANX </td> <td> 821 </td> <td> NM_001024649 /// NM_001746 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0009306 // protein secretion // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048488 // synaptic vesicle endocytosis // inferred from sequence or structural similarity /// 0061077 // chaperone-mediated protein folding // inferred from electronic annotation /// 0072583 // clathrin-mediated endocytosis // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0001948 // glycoprotein binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0034185 // apolipoprotein binding // inferred from electronic annotation /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -166.45 </td> <td> 2028.55 </td> <td> -2.57 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212540_at </td> <td> 212540_at </td> <td> BG476661 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG476661 /FEA=EST /DB_XREF=gi:13408940 /DB_XREF=est:602524946F1 /CLONE=IMAGE:4643458 /UG=Hs.76932 cell division cycle 34 </td> <td> BG476661 </td> <td> cell division cycle 34 </td> <td> CDC34 </td> <td> 997 </td> <td> NM_004359 /// XM_005259690 /// XM_006722952 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // non-traceable author statement /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0006270 // DNA replication initiation // non-traceable author statement /// 0006464 // cellular protein modification process // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // non-traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043951 // negative regulation of cAMP-mediated signaling // inferred from direct assay /// 0070848 // response to growth factor // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0090261 // positive regulation of inclusion body assembly // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> -59.25 </td> <td> 190.40 </td> <td> -2.56 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 217356_s_at </td> <td> 217356_s_at </td> <td> S81916 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:S81916.1 /DEF=phosphoglycerate kinase {alternatively spliced} human, phosphoglycerate kinase deficient patient with episodes of muscl, mRNA Partial Mutant, 307 nt.  /FEA=mRNA /PROD=phosphoglycerate kinase /DB_XREF=gi:1470308 /UG=Hs.169313 Phosphoglycerate kinase {alternatively spliced} human, phosphoglycerate kinase deficient patient with episodes of muscl, mRNA Partial Mutant, 307 nt </td> <td> S81916 </td> <td> phosphoglycerate kinase 1 </td> <td> PGK1 </td> <td> 5230 </td> <td> NM_000291 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // not recorded /// 0004618 // phosphoglycerate kinase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -269.95 </td> <td> 876.83 </td> <td> -2.56 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201872_s_at </td> <td> 201872_s_at </td> <td> AI002002 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI002002 /FEA=EST /DB_XREF=gi:3202473 /DB_XREF=est:ot42e10.s1 /CLONE=IMAGE:1619466 /UG=Hs.12013 ATP-binding cassette, sub-family E (OABP), member 1 /FL=gb:NM_002940.1 </td> <td> AI002002 </td> <td> ATP-binding cassette, sub-family E (OABP), member 1 </td> <td> ABCE1 </td> <td> 6059 </td> <td> NM_001040876 /// NM_002940 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006401 // RNA catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008428 // ribonuclease inhibitor activity // traceable author statement /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation </td> <td> 67.25 </td> <td> 364.05 </td> <td> 2.56 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202771_at </td> <td> 202771_at </td> <td> NM_014745 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014745.1 /DEF=Homo sapiens KIAA0233 gene product (KIAA0233), mRNA. /FEA=mRNA /GEN=KIAA0233 /PROD=KIAA0233 gene product /DB_XREF=gi:7662013 /UG=Hs.79077 KIAA0233 gene product /FL=gb:D87071.1 gb:NM_014745.1 </td> <td> NM_014745 </td> <td> piezo-type mechanosensitive ion channel component 1 </td> <td> PIEZO1 </td> <td> 9780 </td> <td> NM_001142864 /// XM_006721353 /// XM_006721354 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from sequence or structural similarity /// 0033625 // positive regulation of integrin activation // inferred from mutant phenotype /// 0033634 // positive regulation of cell-cell adhesion mediated by integrin // inferred from mutant phenotype /// 0034220 // ion transmembrane transport // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0050982 // detection of mechanical stimulus // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation </td> <td> 0005261 // cation channel activity // inferred from sequence or structural similarity /// 0008381 // mechanically-gated ion channel activity // inferred from electronic annotation </td> <td> -197.80 </td> <td> 484.98 </td> <td> -2.56 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 211981_at </td> <td> 211981_at </td> <td> NM_001845 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_001845.1 /DEF=Homo sapiens collagen, type IV, alpha 1 (COL4A1), mRNA. /FEA=CDS /GEN=COL4A1 /PROD=collagen, type IV, alpha 1 /DB_XREF=gi:7656984 /UG=Hs.119129 collagen, type IV, alpha 1 /FL=gb:NM_001845.1 </td> <td> NM_001845 </td> <td> collagen, type IV, alpha 1 </td> <td> COL4A1 </td> <td> 1282 </td> <td> NM_001845 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from mutant phenotype /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from mutant phenotype /// 0007528 // neuromuscular junction development // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from mutant phenotype /// 0061304 // retinal blood vessel morphogenesis // inferred from mutant phenotype /// 0061333 // renal tubule morphogenesis // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071711 // basement membrane organization // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005587 // collagen type IV trimer // inferred from mutant phenotype /// 0005604 // basement membrane // inferred by curator /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0031012 // extracellular matrix // inferred from sequence or structural similarity </td> <td> 0005201 // extracellular matrix structural constituent // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0030023 // extracellular matrix constituent conferring elasticity // inferred by curator /// 0048407 // platelet-derived growth factor binding // inferred from direct assay </td> <td> -240.10 </td> <td> 946.98 </td> <td> -2.56 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 211799_x_at </td> <td> 211799_x_at </td> <td> U62824 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U62824.1 /DEF=Homo sapiens HLA class I heavy chain (HLA-Cw*1701) mRNA, complete cds.  /FEA=CDS /GEN=HLA-Cw*1701 /PROD=HLA class I heavy chain /DB_XREF=gi:1575443 /UG=Hs.287811 H.sapiens mRNA for HLA-C alpha chain (Cw*1701) /FL=gb:U62824.1 </td> <td> U62824 </td> <td> major histocompatibility complex, class I, C </td> <td> HLA-C </td> <td> 3107 </td> <td> NM_001243042 /// NM_002117 </td> <td> 0001539 // cilium or flagellum-dependent cell motility // non-traceable author statement /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002486 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent // inferred from direct assay /// 0006955 // immune response // non-traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005102 // receptor binding // not recorded /// 0032395 // MHC class II receptor activity // non-traceable author statement /// 0042605 // peptide antigen binding // not recorded /// 0042605 // peptide antigen binding // inferred from direct assay /// 0042605 // peptide antigen binding // inferred from sequence or structural similarity /// 0046977 // TAP binding // inferred from direct assay </td> <td> -65.47 </td> <td> 143.96 </td> <td> -2.56 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201921_at </td> <td> 201921_at </td> <td> NM_004125 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004125.1 /DEF=Homo sapiens guanine nucleotide binding protein 10 (GNG10), mRNA. /FEA=mRNA /GEN=GNG10 /PROD=guanine nucleotide binding protein 10 /DB_XREF=gi:4758445 /UG=Hs.79126 guanine nucleotide binding protein 10 /FL=gb:NM_004125.1 gb:U31383.1 </td> <td> NM_004125 </td> <td> guanine nucleotide binding protein (G protein), gamma 10 </td> <td> GNG10 </td> <td> 2790 </td> <td> NM_001017998 /// NM_001198664 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0006184 // GTP catabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement </td> <td> 0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation </td> <td> 91.85 </td> <td> 318.18 </td> <td> 2.56 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201521_s_at </td> <td> 201521_s_at </td> <td> NM_007362 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007362.1 /DEF=Homo sapiens nuclear cap binding protein subunit 2, 20kD (NCBP2), mRNA.  /FEA=mRNA /GEN=NCBP2 /PROD=nuclear cap binding protein subunit 2, 20kD /DB_XREF=gi:6679063 /UG=Hs.240770 nuclear cap binding protein subunit 2, 20kD /FL=gb:D59253.1 gb:BC001255.1 gb:NM_007362.1 </td> <td> NM_007362 </td> <td> nuclear cap binding protein subunit 2, 20kDa </td> <td> NCBP2 </td> <td> 22916 </td> <td> NM_001042540 /// NM_007362 /// XM_005269313 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // inferred from direct assay /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006408 // snRNA export from nucleus // inferred from sequence or structural similarity /// 0006408 // snRNA export from nucleus // non-traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0008334 // histone mRNA metabolic process // traceable author statement /// 0008380 // RNA splicing // inferred from sequence or structural similarity /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement /// 0045292 // mRNA cis splicing, via spliceosome // inferred from direct assay /// 0046833 // positive regulation of RNA export from nucleus // inferred from sequence or structural similarity /// 0050434 // positive regulation of viral transcription // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from direct assay /// 0005846 // nuclear cap binding complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000339 // RNA cap binding // non-traceable author statement /// 0000340 // RNA 7-methylguanosine cap binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 35.40 </td> <td> 118.35 </td> <td> 2.56 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212846_at </td> <td> 212846_at </td> <td> AA811192 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA811192 /FEA=EST /DB_XREF=gi:2880803 /DB_XREF=est:ob72b08.s1 /CLONE=IMAGE:1336887 /UG=Hs.152629 KIAA0179 protein </td> <td> AA811192 </td> <td> ribosomal RNA processing 1B </td> <td> RRP1B </td> <td> 23076 </td> <td> NM_015056 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay </td> <td> 0000791 // euchromatin // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0030688 // preribosome, small subunit precursor // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 84.85 </td> <td> 355.77 </td> <td> 2.56 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 219347_at </td> <td> 219347_at </td> <td> NM_018283 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018283.1 /DEF=Homo sapiens hypothetical protein FLJ10956 (FLJ10956), mRNA. /FEA=mRNA /GEN=FLJ10956 /PROD=hypothetical protein FLJ10956 /DB_XREF=gi:8922791 /UG=Hs.144407 hypothetical protein FLJ10956 /FL=gb:NM_018283.1 </td> <td> NM_018283 </td> <td> nudix (nucleoside diphosphate linked moiety X)-type motif 15 </td> <td> NUDT15 </td> <td> 55270 </td> <td> NM_018283 </td> <td> 0006184 // GTP catabolic process // inferred from direct assay /// 0006203 // dGTP catabolic process // inferred from direct assay /// 0034656 // nucleobase-containing small molecule catabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0008413 // 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0035539 // 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 31.12 </td> <td> 82.79 </td> <td> 2.56 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 214443_at </td> <td> 214443_at </td> <td> NM_006505 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_006505.1 /DEF=Homo sapiens poliovirus receptor (PVR), mRNA. /FEA=CDS /GEN=PVR /PROD=poliovirus receptor /DB_XREF=gi:5729994 /UG=Hs.321018 poliovirus receptor /FL=gb:NM_006505.1 </td> <td> NM_006505 </td> <td> poliovirus receptor </td> <td> PVR </td> <td> 5817 </td> <td> NM_001135768 /// NM_001135769 /// NM_001135770 /// NM_006505 /// XM_005259120 </td> <td> 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0045216 // cell-cell junction organization // traceable author statement /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0060370 // susceptibility to T cell mediated cytotoxicity // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction </td> <td> -43.55 </td> <td> 105.50 </td> <td> -2.56 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212481_s_at </td> <td> 212481_s_at </td> <td> AI214061 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI214061 /FEA=EST /DB_XREF=gi:3777662 /DB_XREF=est:ap29d10.x1 /CLONE=IMAGE:1956787 /UG=Hs.250641 tropomyosin 4 </td> <td> AI214061 </td> <td> tropomyosin 4 </td> <td> TPM4 </td> <td> 7171 </td> <td> NM_001145160 /// NM_003290 /// XM_005260042 /// XM_006722865 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0030049 // muscle filament sliding // traceable author statement </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0002102 // podosome // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005862 // muscle thin filament tropomyosin // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0008307 // structural constituent of muscle // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 121.05 </td> <td> 505.65 </td> <td> 2.55 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201786_s_at </td> <td> 201786_s_at </td> <td> NM_001111 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001111.2 /DEF=Homo sapiens adenosine deaminase, RNA-specific (ADAR), transcript variant ADAR-a, mRNA.  /FEA=mRNA /GEN=ADAR /PROD=adenosine deaminase, RNA-specific, isoformADAR-a /DB_XREF=gi:7669471 /UG=Hs.7957 adenosine deaminase, RNA-specific /FL=gb:U10439.1 gb:NM_001111.2 gb:U18121.1 </td> <td> NM_001111 </td> <td> adenosine deaminase, RNA-specific </td> <td> ADAR </td> <td> 103 </td> <td> NM_001025107 /// NM_001111 /// NM_001193495 /// NM_015840 /// NM_015841 /// XM_006711109 /// XM_006711110 /// XM_006711111 /// XM_006711112 /// XM_006711113 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006382 // adenosine to inosine editing // inferred from direct assay /// 0006382 // adenosine to inosine editing // inferred from mutant phenotype /// 0006382 // adenosine to inosine editing // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006611 // protein export from nucleus // inferred from direct assay /// 0009615 // response to virus // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016553 // base conversion or substitution editing // inferred from direct assay /// 0016556 // mRNA modification // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0035455 // response to interferon-alpha // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044387 // negative regulation of protein kinase activity by regulation of protein phosphorylation // inferred from direct assay /// 0044387 // negative regulation of protein kinase activity by regulation of protein phosphorylation // inferred from mutant phenotype /// 0045070 // positive regulation of viral genome replication // inferred from direct assay /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0051607 // defense response to virus // inferred from electronic annotation /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0044530 // supraspliceosomal complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003726 // double-stranded RNA adenosine deaminase activity // inferred from direct assay /// 0003726 // double-stranded RNA adenosine deaminase activity // non-traceable author statement /// 0004000 // adenosine deaminase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 52.85 </td> <td> 396.38 </td> <td> 2.55 </td> <td> 0.04 </td> <td> 0.06 </td> <td> -4.52 </td> </tr>
  <tr> <td> 217883_at </td> <td> 217883_at </td> <td> NM_015702 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015702.1 /DEF=Homo sapiens hypothetical protein (CL25022), mRNA. /FEA=mRNA /GEN=CL25022 /PROD=hypothetical protein /DB_XREF=gi:7661547 /UG=Hs.5324 hypothetical protein /FL=gb:AF060224.1 gb:BC000932.2 gb:AF131802.1 gb:AF161510.1 gb:NM_015702.1 </td> <td> NM_015702 </td> <td> methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria </td> <td> MMADHC </td> <td> 27249 </td> <td> NM_015702 </td> <td> 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0009235 // cobalamin metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td>  </td> <td> 68.83 </td> <td> 757.16 </td> <td> 2.54 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 209024_s_at </td> <td> 209024_s_at </td> <td> AI472757 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI472757 /FEA=EST /DB_XREF=gi:4325802 /DB_XREF=est:ta13e05.x1 /CLONE=IMAGE:2043968 /UG=Hs.155489 NS1-associated protein 1 /FL=gb:AF037448.1 </td> <td> AI472757 </td> <td> synaptotagmin binding, cytoplasmic RNA interacting protein </td> <td> SYNCRIP </td> <td> 10492 </td> <td> NM_001159673 /// NM_001159674 /// NM_001159675 /// NM_001159676 /// NM_001159677 /// NM_001253771 /// NM_006372 /// XM_005248635 /// XM_005248636 /// XM_005248637 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype /// 0071346 // cellular response to interferon-gamma // inferred from direct assay </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from sequence or structural similarity /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 69.93 </td> <td> 539.01 </td> <td> 2.54 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 217550_at </td> <td> 217550_at </td> <td> AA576497 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA576497 /FEA=EST /DB_XREF=gi:2353997 /DB_XREF=est:nm76b07.s1 /CLONE=IMAGE:1074133 /UG=Hs.252497 ESTs </td> <td> AA576497 </td> <td> activating transcription factor 6 </td> <td> ATF6 </td> <td> 22926 </td> <td> NM_007348 /// XM_006711224 /// XM_006711225 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006990 // positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 27.28 </td> <td> 49.56 </td> <td> 2.54 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 211596_s_at </td> <td> 211596_s_at </td> <td> AB050468 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB050468.1 /DEF=Homo sapiens mRNA for membrane glycoprotein LIG-1, complete cds. /FEA=mRNA /GEN=lig-1 /PROD=membrane glycoprotein LIG-1 /DB_XREF=gi:13537354 /FL=gb:AB050468.1 </td> <td> AB050468 </td> <td> leucine-rich repeats and immunoglobulin-like domains 1 </td> <td> LRIG1 </td> <td> 26018 </td> <td> NM_015541 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -43.00 </td> <td> 193.25 </td> <td> -2.54 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 203103_s_at </td> <td> 203103_s_at </td> <td> NM_014502 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014502.1 /DEF=Homo sapiens nuclear matrix protein NMP200 related to splicing factor PRP19 (NMP200), mRNA.  /FEA=mRNA /GEN=NMP200 /PROD=nuclear matrix protein NMP200 related tosplicing factor PRP19 /DB_XREF=gi:7657380 /UG=Hs.173980 nuclear matrix protein NMP200 related to splicing factor PRP19 /FL=gb:NM_014502.1 </td> <td> NM_014502 </td> <td> pre-mRNA processing factor 19 </td> <td> PRPF19 </td> <td> 27339 </td> <td> NM_014502 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0000245 // spliceosomal complex assembly // inferred from mutant phenotype /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // inferred from direct assay /// 0001833 // inner cell mass cell proliferation // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0048026 // positive regulation of mRNA splicing, via spliceosome // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation </td> <td> 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0000974 // Prp19 complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005811 // lipid particle // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 38.70 </td> <td> 212.88 </td> <td> 2.54 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202582_s_at </td> <td> 202582_s_at </td> <td> AF306510 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF306510.1 /DEF=Homo sapiens RANBPM mRNA, complete cds. /FEA=mRNA /PROD=RANBPM /DB_XREF=gi:13194575 /UG=Hs.279886 RAN binding protein 9 /FL=gb:AF306510.1 gb:AB008515.1 gb:NM_005493.1 </td> <td> AF306510 </td> <td> RAN binding protein 9 </td> <td> RANBP9 </td> <td> 10048 </td> <td> NM_005493 /// XM_006714945 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0007020 // microtubule nucleation // non-traceable author statement /// 0007411 // axon guidance // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005875 // microtubule associated complex // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> -69.23 </td> <td> 331.09 </td> <td> -2.54 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200967_at </td> <td> 200967_at </td> <td> NM_000942 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000942.1 /DEF=Homo sapiens peptidylprolyl isomerase B (cyclophilin B) (PPIB), mRNA.  /FEA=mRNA /GEN=PPIB /PROD=peptidylprolyl isomerase B (cyclophilin B) /DB_XREF=gi:4758949 /UG=Hs.699 peptidylprolyl isomerase B (cyclophilin B) /FL=gb:BC001125.1 gb:M60857.1 gb:M63573.1 gb:NM_000942.1 </td> <td> NM_000942 </td> <td> peptidylprolyl isomerase B (cyclophilin B) </td> <td> PPIB </td> <td> 5479 </td> <td> NM_000942 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0040018 // positive regulation of multicellular organism growth // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0060348 // bone development // inferred from mutant phenotype /// 0061077 // chaperone-mediated protein folding // inferred from direct assay /// 0061077 // chaperone-mediated protein folding // inferred from mutant phenotype /// 1901873 // regulation of post-translational protein modification // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // non-traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0032991 // macromolecular complex // inferred from sequence or structural similarity /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from sequence or structural similarity /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from sequence or structural similarity /// 0016853 // isomerase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from sequence or structural similarity /// 0042277 // peptide binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // traceable author statement </td> <td> 144.82 </td> <td> 952.19 </td> <td> 2.54 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 222175_s_at </td> <td> 222175_s_at </td> <td> AK000003 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK000003.1 /DEF=Homo sapiens mRNA for FLJ00003 protein, partial cds. /FEA=mRNA /GEN=FLJ00003 /PROD=FLJ00003 protein /DB_XREF=gi:7209306 /UG=Hs.8657 TIG-1 </td> <td> AK000003 </td> <td> mediator complex subunit 15 </td> <td> MED15 </td> <td> 51586 </td> <td> NM_001003891 /// NM_001293234 /// NM_001293235 /// NM_001293236 /// NM_001293237 /// NM_015889 /// XM_005261632 /// XM_006724261 /// XM_006724262 /// XM_006724263 /// XM_006724264 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0019827 // stem cell maintenance // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation </td> <td> 0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -80.40 </td> <td> 217.50 </td> <td> -2.54 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 210822_at </td> <td> 210822_at </td> <td> U72513 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U72513.1 /DEF=Human RPL13-2 pseudogene mRNA, complete cds. /FEA=mRNA /PROD=RPL13-2 /DB_XREF=gi:1673516 /UG=Hs.159486 Human RPL13-2 pseudogene mRNA, complete cds /FL=gb:U72513.1 </td> <td> U72513 </td> <td> leucine rich repeat containing 23 /// ribosomal protein L13 pseudogene 5 </td> <td> LRRC23 /// RPL13P5 </td> <td> 10233 /// 283345 </td> <td> NM_001135217 /// NM_006992 /// NM_201650 /// NR_002803 </td> <td>  </td> <td>  </td> <td>  </td> <td> -61.68 </td> <td> 40.99 </td> <td> -2.54 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218170_at </td> <td> 218170_at </td> <td> NM_016048 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016048.1 /DEF=Homo sapiens CGI-111 protein (LOC51015), mRNA. /FEA=mRNA /GEN=LOC51015 /PROD=CGI-111 protein /DB_XREF=gi:7705613 /UG=Hs.11085 CGI-111 protein /FL=gb:AF151869.1 gb:NM_016048.1 </td> <td> NM_016048 </td> <td> isochorismatase domain containing 1 </td> <td> ISOC1 </td> <td> 51015 </td> <td> NM_016048 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005777 // peroxisome // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation </td> <td> 27.15 </td> <td> 168.25 </td> <td> 2.54 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 204102_s_at </td> <td> 204102_s_at </td> <td> NM_001961 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001961.1 /DEF=Homo sapiens eukaryotic translation elongation factor 2 (EEF2), mRNA.  /FEA=mRNA /GEN=EEF2 /PROD=eukaryotic translation elongation factor 2 /DB_XREF=gi:4503482 /UG=Hs.75309 eukaryotic translation elongation factor 2 /FL=gb:NM_001961.1 </td> <td> NM_001961 </td> <td> eukaryotic translation elongation factor 2 </td> <td> EEF2 </td> <td> 1938 </td> <td> NM_001961 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from genetic interaction /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from genetic interaction </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005844 // polysome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008494 // translation activator activity // inferred from genetic interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -466.20 </td> <td> 2227.35 </td> <td> -2.53 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200891_s_at </td> <td> 200891_s_at </td> <td> NM_003144 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003144.2 /DEF=Homo sapiens signal sequence receptor, alpha (translocon-associated protein alpha) (SSR1), mRNA.  /FEA=mRNA /GEN=SSR1 /PROD=signal sequence receptor, alpha /DB_XREF=gi:6552340 /UG=Hs.250773 signal sequence receptor, alpha (translocon-associated protein alpha) /FL=gb:AF156965.1 gb:NM_003144.2 </td> <td> NM_003144 </td> <td> signal sequence receptor, alpha </td> <td> SSR1 </td> <td> 6745 </td> <td> NM_001292008 /// NM_003144 /// NR_120448 </td> <td> 0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 333.35 </td> <td> 860.38 </td> <td> 2.53 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 215963_x_at </td> <td> 215963_x_at </td> <td> Z98200 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:Z98200 /DEF=Human DNA sequence from clone RP1-111B22 on chromosome 6q16-21 Contains a novel pseudogene, a pseudogene similar to ribosomal protein L3, ESTs, STSs, GSSs and CpG Islands /FEA=CDS_1 /DB_XREF=gi:6002294 /UG=Hs.296559 Human DNA sequence from clone RP1-111B22 on chromosome 6q16-21 Contains a novel pseudogene, a pseudogene similar to ribosomal protein L3, ESTs, STSs, GSSs and CpG Islands </td> <td> Z98200 </td> <td> ribosomal protein L3 </td> <td> RPL3 </td> <td> 6122 </td> <td> NM_000967 /// NM_001033853 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -603.22 </td> <td> 3381.89 </td> <td> -2.53 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218056_at </td> <td> 218056_at </td> <td> NM_016561 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016561.1 /DEF=Homo sapiens apoptosis regulator (LOC51283), mRNA. /FEA=mRNA /GEN=LOC51283 /PROD=apoptosis regulator /DB_XREF=gi:7706090 /UG=Hs.168159 apoptosis regulator /FL=gb:BC003054.1 gb:AF173003.1 gb:NM_016561.1 </td> <td> NM_016561 </td> <td> bifunctional apoptosis regulator </td> <td> BFAR </td> <td> 51283 </td> <td> NM_016561 /// XM_005255350 /// XM_006725196 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -31.40 </td> <td> 223.12 </td> <td> -2.53 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 217731_s_at </td> <td> 217731_s_at </td> <td> NM_021999 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021999.1 /DEF=Homo sapiens integral membrane protein 2B (ITM2B), mRNA. /FEA=mRNA /GEN=ITM2B /PROD=integral membrane protein 2B /DB_XREF=gi:11527401 /UG=Hs.239625 integral membrane protein 2B /FL=gb:NM_021999.1 gb:AF136973.1 gb:BC000554.1 gb:AF092128.1 gb:AF152462.1 gb:AF246221.1 </td> <td> NM_021999 </td> <td> integral membrane protein 2B </td> <td> ITM2B </td> <td> 9445 </td> <td> NM_021999 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042985 // negative regulation of amyloid precursor protein biosynthetic process // inferred from direct assay /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from direct assay /// 0031301 // integral component of organelle membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001540 // beta-amyloid binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> 179.22 </td> <td> 313.46 </td> <td> 2.53 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 203096_s_at </td> <td> 203096_s_at </td> <td> BF439282 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF439282 /FEA=EST /DB_XREF=gi:11451799 /DB_XREF=est:nab62c11.x1 /CLONE=IMAGE:3272444 /UG=Hs.154545 PDZ domain containing guanine nucleotide exchange factor(GEF)1 /FL=gb:AB002311.1 gb:NM_014247.1 </td> <td> BF439282 </td> <td> Rap guanine nucleotide exchange factor (GEF) 2 </td> <td> RAPGEF2 </td> <td> 9693 </td> <td> NM_014247 /// XM_005263358 /// XM_005263359 /// XM_005263360 /// XM_005263361 /// XM_006714420 /// XM_006714421 /// XM_006714422 </td> <td> 0000165 // MAPK cascade // non-traceable author statement /// 0001568 // blood vessel development // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007218 // neuropeptide signaling pathway // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0019933 // cAMP-mediated signaling // inferred from direct assay /// 0019933 // cAMP-mediated signaling // non-traceable author statement /// 0021591 // ventricular system development // inferred from sequence or structural similarity /// 0021884 // forebrain neuron development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from direct assay /// 0031547 // brain-derived neurotrophic factor receptor signaling pathway // inferred from sequence or structural similarity /// 0032092 // positive regulation of protein binding // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0032486 // Rap protein signal transduction // inferred from mutant phenotype /// 0032854 // positive regulation of Rap GTPase activity // inferred from direct assay /// 0032854 // positive regulation of Rap GTPase activity // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // traceable author statement /// 0038180 // nerve growth factor signaling pathway // inferred from sequence or structural similarity /// 0043950 // positive regulation of cAMP-mediated signaling // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0048022 // negative regulation of melanin biosynthetic process // inferred from sequence or structural similarity /// 0048167 // regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0050774 // negative regulation of dendrite morphogenesis // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0061028 // establishment of endothelial barrier // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071320 // cellular response to cAMP // inferred from direct assay /// 0071321 // cellular response to cGMP // inferred from direct assay /// 0071880 // adenylate cyclase-activating adrenergic receptor signaling pathway // inferred from direct assay /// 1901888 // regulation of cell junction assembly // inferred from mutant phenotype /// 1990090 // cellular response to nerve growth factor stimulus // inferred from sequence or structural similarity /// 2000481 // positive regulation of cAMP-dependent protein kinase activity // inferred from direct assay /// 2000670 // positive regulation of dendritic cell apoptotic process // inferred from direct assay /// 2001214 // positive regulation of vasculogenesis // inferred from sequence or structural similarity /// 2001224 // positive regulation of neuron migration // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0004871 // signal transducer activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017034 // Rap guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0017034 // Rap guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019992 // diacylglycerol binding // non-traceable author statement /// 0030165 // PDZ domain binding // inferred from direct assay /// 0030552 // cAMP binding // inferred from direct assay /// 0030553 // cGMP binding // inferred from direct assay /// 0031697 // beta-1 adrenergic receptor binding // inferred from direct assay /// 0046582 // Rap GTPase activator activity // inferred from direct assay /// 0050699 // WW domain binding // inferred from direct assay </td> <td> -45.80 </td> <td> 122.07 </td> <td> -2.52 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 209053_s_at </td> <td> 209053_s_at </td> <td> BE793789 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE793789 /FEA=EST /DB_XREF=gi:10214987 /DB_XREF=est:601589946F1 /CLONE=IMAGE:3944195 /UG=Hs.110457 Wolf-Hirschhorn syndrome candidate 1 /FL=gb:AF083389.1 </td> <td> BE793789 </td> <td> Wolf-Hirschhorn syndrome candidate 1 </td> <td> WHSC1 </td> <td> 7468 </td> <td> NM_001042424 /// NM_007331 /// NM_014919 /// NM_133330 /// NM_133331 /// NM_133332 /// NM_133333 /// NM_133334 /// NM_133335 /// NM_133336 /// XM_005248001 /// XM_005248002 /// XM_005248005 /// XM_006713914 /// XM_006713915 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0003149 // membranous septum morphogenesis // inferred from electronic annotation /// 0003289 // atrial septum primum morphogenesis // inferred from electronic annotation /// 0003290 // atrial septum secundum morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0060348 // bone development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -45.93 </td> <td> 144.24 </td> <td> -2.52 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 215073_s_at </td> <td> 215073_s_at </td> <td> AL554245 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL554245 /FEA=EST /DB_XREF=gi:12894837 /DB_XREF=est:AL554245 /CLONE=CS0DI082YA02 (5 prime) /UG=Hs.288869 nuclear receptor subfamily 2, group F, member 2 </td> <td> AL554245 </td> <td> nuclear receptor subfamily 2, group F, member 2 </td> <td> NR2F2 </td> <td> 7026 </td> <td> NM_001145155 /// NM_001145156 /// NM_001145157 /// NM_021005 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001893 // maternal placenta development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009956 // radial pattern formation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010596 // negative regulation of endothelial cell migration // inferred from mutant phenotype /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0021796 // cerebral cortex regionalization // inferred from electronic annotation /// 0030522 // intracellular receptor signaling pathway // inferred from direct assay /// 0030522 // intracellular receptor signaling pathway // inferred from electronic annotation /// 0030522 // intracellular receptor signaling pathway // traceable author statement /// 0030900 // forebrain development // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0060707 // trophoblast giant cell differentiation // inferred from electronic annotation /// 0060849 // regulation of transcription involved in lymphatic endothelial cell fate commitment // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0001972 // retinoic acid binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044323 // retinoic acid-responsive element binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 45.95 </td> <td> 154.20 </td> <td> 2.52 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201446_s_at </td> <td> 201446_s_at </td> <td> BF692742 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF692742 /FEA=EST /DB_XREF=gi:11978150 /DB_XREF=est:602079823F1 /CLONE=IMAGE:4244524 /UG=Hs.239489 TIA1 cytotoxic granule-associated RNA-binding protein /FL=gb:NM_022037.1 gb:M77142.1 </td> <td> BF692742 </td> <td> TIA1 cytotoxic granule-associated RNA binding protein </td> <td> TIA1 </td> <td> 7072 </td> <td> NM_022037 /// NM_022173 /// XM_005264524 /// XM_005264525 /// XM_005264526 /// XM_005264527 /// XM_005264528 /// XM_005264530 /// XM_005264531 /// XM_005264532 /// XM_005264533 /// XR_244953 /// XR_244954 /// XR_244955 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0042036 // negative regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0048024 // regulation of mRNA splicing, via spliceosome // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0097165 // nuclear stress granule // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -56.80 </td> <td> 246.82 </td> <td> -2.52 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202596_at </td> <td> 202596_at </td> <td> BC000436 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000436.1 /DEF=Homo sapiens, endosulfine alpha, clone MGC:8394, mRNA, complete cds.  /FEA=mRNA /PROD=endosulfine alpha /DB_XREF=gi:12653334 /UG=Hs.111680 endosulfine alpha /FL=gb:BC000436.1 gb:BC004461.1 gb:NM_004436.1 gb:AF157509.1 </td> <td> BC000436 </td> <td> endosulfine alpha </td> <td> ENSA </td> <td> 2029 </td> <td> NM_004436 /// NM_207042 /// NM_207043 /// NM_207044 /// NM_207045 /// NM_207046 /// NM_207047 /// NM_207168 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from sequence or structural similarity /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from sequence or structural similarity /// 0007584 // response to nutrient // traceable author statement /// 0009749 // response to glucose // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0050790 // regulation of catalytic activity // inferred from sequence or structural similarity /// 0050796 // regulation of insulin secretion // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from direct assay /// 0008200 // ion channel inhibitor activity // traceable author statement /// 0008601 // protein phosphatase type 2A regulator activity // inferred from sequence or structural similarity /// 0019212 // phosphatase inhibitor activity // inferred from sequence or structural similarity /// 0019870 // potassium channel inhibitor activity // inferred from direct assay /// 0051721 // protein phosphatase 2A binding // inferred from sequence or structural similarity </td> <td> 81.57 </td> <td> 368.09 </td> <td> 2.52 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201430_s_at </td> <td> 201430_s_at </td> <td> W72516 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W72516 /FEA=EST /DB_XREF=gi:1382173 /DB_XREF=est:zd64g05.s1 /CLONE=IMAGE:345464 /UG=Hs.74566 dihydropyrimidinase-like 3 /FL=gb:D78014.1 gb:NM_001387.1 </td> <td> W72516 </td> <td> dihydropyrimidinase-like 3 </td> <td> DPYSL3 </td> <td> 1809 </td> <td> NM_001197294 /// NM_001387 </td> <td> 0006208 // pyrimidine nucleobase catabolic process // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0010977 // negative regulation of neuron projection development // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0048666 // neuron development // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from sequence or structural similarity /// 0051017 // actin filament bundle assembly // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from sequence or structural similarity /// 0051491 // positive regulation of filopodium assembly // inferred from sequence or structural similarity /// 0051764 // actin crosslink formation // inferred from sequence or structural similarity /// 0071345 // cellular response to cytokine stimulus // inferred from sequence or structural similarity </td> <td> 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0031941 // filamentous actin // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0044297 // cell body // inferred from sequence or structural similarity /// 0070382 // exocytic vesicle // inferred from sequence or structural similarity </td> <td> 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from sequence or structural similarity /// 0035374 // chondroitin sulfate binding // inferred from sequence or structural similarity /// 0051219 // phosphoprotein binding // inferred from electronic annotation </td> <td> -53.70 </td> <td> 217.75 </td> <td> -2.52 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 208729_x_at </td> <td> 208729_x_at </td> <td> D83043 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D83043.1 /DEF=Human HLA-B mRNA, allele A*2711, complete cds. /FEA=mRNA /GEN=HLA-B /DB_XREF=gi:1871135 /UG=Hs.77961 major histocompatibility complex, class I, B /FL=gb:U36492.1 gb:U35431.1 gb:L37881.1 gb:U31971.1 gb:L42345.1 gb:U50710.1 gb:L41925.1 gb:L41214.1 gb:U27608.1 gb:U35734.1 gb:U70528.1 gb:U70529.1 gb:U80945.1 gb:U64801.1 gb:U09864.1 gb:M77776.1 gb:M77775.1 gb:L04696.1 gb:D83043.1 gb:M12678.1 gb:L09736.1 gb:L09735.1 gb:M75138.1 gb:M84381.1 gb:M84382.1 gb:M84383.1 gb:M84384.1 gb:M84385.1 gb:M32318.1 gb:M32319.1 gb:M32320.1 gb:M81798.1 gb:L04695.1 gb:M84694.1 gb:U30936.1 gb:AF016641.1 gb:U36392.1 gb:AB008102.1 gb:U75533.1 gb:U57966.1 gb:AF026218.1 gb:L07743.1 gb:U01848.1 gb:U38800.1 gb:U40498.1 gb:U03027.1 gb:U03859.1 gb:L22028.1 gb:U04243.1 gb:U06862.1 gb:L32862.1 gb:L15005.1 gb:L22027.1 gb:L19923.1 gb:L11666.1 gb:L11604.1 gb:L11603.1 gb:L19937.1 gb:L33923.1 gb:AF170577.1 gb:M28205.1 gb:U17107.1 gb:U14943.1 gb:AF130734.1 gb:D25275.1 gb:D50290.1 gb:D50291.1 gb:D50299.1 gb:D50300.1 gb:L38504.1 gb:L36 </td> <td> D83043 </td> <td> major histocompatibility complex, class I, B </td> <td> HLA-B </td> <td> 3106 </td> <td> NM_005514 /// XM_005249043 /// XM_005275100 /// XM_005275238 /// XM_005275376 /// XM_005275377 /// XM_005275535 /// XM_006725904 /// XM_006725905 /// XR_246962 /// XR_427830 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from direct assay /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002486 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent // inferred from direct assay /// 0002667 // regulation of T cell anergy // inferred from mutant phenotype /// 0006952 // defense response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016045 // detection of bacterium // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032655 // regulation of interleukin-12 production // inferred from mutant phenotype /// 0032675 // regulation of interleukin-6 production // inferred from mutant phenotype /// 0042270 // protection from natural killer cell mediated cytotoxicity // inferred from direct assay /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 2001198 // regulation of dendritic cell differentiation // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005102 // receptor binding // not recorded /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0042605 // peptide antigen binding // not recorded /// 0042605 // peptide antigen binding // inferred from direct assay /// 0042605 // peptide antigen binding // inferred from sequence or structural similarity /// 0046977 // TAP binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> -67.18 </td> <td> 254.91 </td> <td> -2.51 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202318_s_at </td> <td> 202318_s_at </td> <td> AF306508 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF306508.1 /DEF=Homo sapiens SUMO-1 specific protease FKSG6 mRNA, complete cds. /FEA=mRNA /PROD=SUMO-1 specific protease FKSG6 /DB_XREF=gi:11096243 /UG=Hs.27197 SUMO-1-specific protease /FL=gb:AF307849.1 gb:AF306508.1 gb:AF196304.1 gb:NM_015571.1 </td> <td> AF306508 </td> <td> SUMO1/sentrin specific peptidase 6 </td> <td> SENP6 </td> <td> 26054 </td> <td> NM_001100409 /// NM_015571 /// XM_006715457 /// XR_241847 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0016926 // protein desumoylation // inferred from mutant phenotype /// 0070646 // protein modification by small protein removal // inferred from direct assay /// 0090169 // regulation of spindle assembly // inferred from mutant phenotype /// 0090234 // regulation of kinetochore assembly // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016929 // SUMO-specific protease activity // inferred from mutant phenotype </td> <td> -30.78 </td> <td> 150.81 </td> <td> -2.51 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 205690_s_at </td> <td> 205690_s_at </td> <td> NM_003910 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003910.1 /DEF=Homo sapiens maternal G10 transcript (G10), mRNA. /FEA=mRNA /GEN=G10 /PROD=maternal G10 transcript /DB_XREF=gi:4503836 /UG=Hs.330310 maternal G10 transcript /FL=gb:NM_003910.1 gb:U11861.1 </td> <td> NM_003910 </td> <td> BUD31 homolog (S. cerevisiae) </td> <td> BUD31 </td> <td> 8896 </td> <td> NM_003910 /// XM_005250670 /// XM_005250671 /// XM_005250672 /// XM_005250673 /// XM_005250674 </td> <td> 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement </td> <td> -45.10 </td> <td> 266.45 </td> <td> -2.51 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212673_at </td> <td> 212673_at </td> <td> D42084 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D42084.1 /DEF=Human mRNA for KIAA0094 gene, partial cds. /FEA=mRNA /GEN=KIAA0094 /DB_XREF=gi:577314 /UG=Hs.82007 KIAA0094 protein </td> <td> D42084 </td> <td> methionyl aminopeptidase 1 </td> <td> METAP1 </td> <td> 23173 </td> <td> NM_015143 /// XM_005262867 /// XM_005262868 </td> <td> 0006417 // regulation of translation // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007603 // phototransduction, visible light // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0018206 // peptidyl-methionine modification // traceable author statement /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0031365 // N-terminal protein amino acid modification // traceable author statement /// 0070084 // protein initiator methionine removal // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0022626 // cytosolic ribosome // inferred from electronic annotation </td> <td> 0004177 // aminopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008235 // metalloexopeptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070006 // metalloaminopeptidase activity // inferred from electronic annotation </td> <td> 39.12 </td> <td> 261.06 </td> <td> 2.51 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 35436_at </td> <td> 35436_at </td> <td> L06147 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. L06147:Human (clone SY11) golgin-95 mRNA, complete cds /cds=(18,1880) /gb=L06147 /gi=306781 /ug=Hs.169055 /len=2067 </td> <td> L06147 </td> <td> golgin A2 </td> <td> GOLGA2 </td> <td> 2801 </td> <td> NM_004486 /// XM_005251930 /// XM_005251931 /// XM_005251932 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007021 // tubulin complex assembly // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0051645 // Golgi localization // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005801 // cis-Golgi network // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 40.00 </td> <td> 76.50 </td> <td> 2.51 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 210879_s_at </td> <td> 210879_s_at </td> <td> AF334812 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF334812.1 /DEF=Homo sapiens Rab11 interacting protein Rip11a mRNA, complete cds. /FEA=mRNA /PROD=Rab11 interacting protein Rip11a /DB_XREF=gi:13377896 /UG=Hs.24557 KIAA0857 protein /FL=gb:AF334812.1 </td> <td> AF334812 </td> <td> RAB11 family interacting protein 5 (class I) </td> <td> RAB11FIP5 </td> <td> 26056 </td> <td> NM_015470 /// XM_005264251 /// XM_005264252 /// XM_005264253 /// XM_006711985 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035773 // insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0045055 // regulated secretory pathway // inferred from sequence or structural similarity /// 0071468 // cellular response to acidity // inferred from direct assay /// 2000008 // regulation of protein localization to cell surface // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from sequence or structural similarity /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0055037 // recycling endosome // inferred from sequence or structural similarity /// 0055038 // recycling endosome membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from direct assay </td> <td> 25.90 </td> <td> 116.67 </td> <td> 2.51 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 213244_at </td> <td> 213244_at </td> <td> AI207792 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI207792 /FEA=EST /DB_XREF=gi:3769734 /DB_XREF=est:ao89d03.x1 /CLONE=IMAGE:1953029 /UG=Hs.306019 ESTs, Weakly similar to ALU7_HUMAN ALU SUBFAMILY SQ SEQUENCE CONTAMINATION WARNING ENTRY H.sapiens </td> <td> AI207792 </td> <td> secretory carrier membrane protein 4 </td> <td> SCAMP4 </td> <td> 113178 </td> <td> NM_079834 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 26.65 </td> <td> 74.65 </td> <td> 2.51 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218011_at </td> <td> 218011_at </td> <td> NM_024292 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024292.1 /DEF=Homo sapiens ubiquitin-like 5 (UBL5), mRNA. /FEA=mRNA /GEN=UBL5 /PROD=ubiquitin-like 5 /DB_XREF=gi:13236509 /UG=Hs.109701 ubiquitin-like 5 /FL=gb:AF313915.1 gb:NM_024292.1 </td> <td> NM_024292 </td> <td> ubiquitin-like 5 </td> <td> UBL5 </td> <td> 59286 </td> <td> NM_001048241 /// NM_024292 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 98.98 </td> <td> 335.36 </td> <td> 2.51 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201960_s_at </td> <td> 201960_s_at </td> <td> NM_015057 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015057.1 /DEF=Homo sapiens KIAA0916 protein (KIAA0916), mRNA. /FEA=mRNA /GEN=KIAA0916 /PROD=KIAA0916 protein /DB_XREF=gi:7662379 /UG=Hs.151411 KIAA0916 protein /FL=gb:AF075587.1 gb:AF083244.1 gb:NM_015057.1 </td> <td> NM_015057 </td> <td> MYC binding protein 2, E3 ubiquitin protein ligase </td> <td> MYCBP2 </td> <td> 23077 </td> <td> NM_015057 /// XM_005266299 /// XM_005266300 /// XM_006719779 /// XM_006719780 /// XM_006719781 /// XM_006719782 /// XM_006719783 /// XM_006719784 /// XM_006719785 /// XM_006719786 /// XM_006719787 /// XM_006719788 /// XM_006719789 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008045 // motor neuron axon guidance // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0021785 // branchiomotor neuron axon guidance // inferred from electronic annotation /// 0021952 // central nervous system projection neuron axonogenesis // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -73.82 </td> <td> 246.76 </td> <td> -2.51 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200612_s_at </td> <td> 200612_s_at </td> <td> NM_001282 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001282.1 /DEF=Homo sapiens adaptor-related protein complex 2, beta 1 subunit (AP2B1), mRNA.  /FEA=mRNA /GEN=AP2B1 /PROD=adaptor-related protein complex 2, beta 1subunit /DB_XREF=gi:4557468 /UG=Hs.74626 adaptor-related protein complex 2, beta 1 subunit /FL=gb:M34175.1 gb:NM_001282.1 </td> <td> NM_001282 </td> <td> adaptor-related protein complex 2, beta 1 subunit </td> <td> AP2B1 </td> <td> 163 </td> <td> NM_001030006 /// NM_001282 /// XM_005257937 /// XM_005257938 /// XM_005257941 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement </td> <td> 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> 191.70 </td> <td> 296.50 </td> <td> 2.51 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218069_at </td> <td> 218069_at </td> <td> NM_024096 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024096.1 /DEF=Homo sapiens hypothetical protein MGC5627 (MGC5627), mRNA. /FEA=mRNA /GEN=MGC5627 /PROD=hypothetical protein MGC5627 /DB_XREF=gi:13129099 /UG=Hs.237971 hypothetical protein MGC5627 /FL=gb:BC001344.1 gb:NM_024096.1 gb:AF212242.1 </td> <td> NM_024096 </td> <td> dCTP pyrophosphatase 1 </td> <td> DCTPP1 </td> <td> 79077 </td> <td> NM_024096 </td> <td> 0009143 // nucleoside triphosphate catabolic process // inferred from sequence or structural similarity /// 0051289 // protein homotetramerization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0016462 // pyrophosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0032556 // pyrimidine deoxyribonucleotide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047429 // nucleoside-triphosphate diphosphatase activity // inferred from sequence or structural similarity /// 0047840 // dCTP diphosphatase activity // inferred from electronic annotation </td> <td> 47.02 </td> <td> 189.04 </td> <td> 2.50 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 214280_x_at </td> <td> 214280_x_at </td> <td> X79536 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X79536.1 /DEF=H.sapiens mRNA for hnRNPcore protein A1. /FEA=mRNA /PROD=hnRNPcore protein A1 /DB_XREF=gi:496897 /UG=Hs.249495 heterogeneous nuclear ribonucleoprotein A1 </td> <td> X79536 </td> <td> heterogeneous nuclear ribonucleoprotein A1 </td> <td> HNRNPA1 </td> <td> 3178 </td> <td> NM_002136 /// NM_031157 /// XM_005268826 /// XR_245923 /// XR_245924 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006405 // RNA export from nucleus // inferred by curator /// 0006810 // transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051168 // nuclear export // inferred from direct assay /// 0051170 // nuclear import // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // traceable author statement /// 0003727 // single-stranded RNA binding // inferred by curator /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -201.35 </td> <td> 516.00 </td> <td> -2.50 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 40562_at </td> <td> 40562_at </td> <td> AF011499 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. M69013:Human guanine nucleotide-binding regulatory protein (G-y-alpha) mRNA, complete cds /cds=(186,1265) /gb=M69013 /gi=183690 /ug=Hs.1686 /len=1540 </td> <td> AF011499 </td> <td> guanine nucleotide binding protein (G protein), alpha 11 (Gq class) </td> <td> GNA11 </td> <td> 2767 </td> <td> NM_002067 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001508 // action potential // not recorded /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // not recorded /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0045634 // regulation of melanocyte differentiation // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0060158 // phospholipase C-activating dopamine receptor signaling pathway // not recorded </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // not recorded /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // not recorded /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // not recorded /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031826 // type 2A serotonin receptor binding //  /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 36.20 </td> <td> 141.95 </td> <td> 2.50 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201570_at </td> <td> 201570_at </td> <td> NM_015380 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015380.1 /DEF=Homo sapiens CGI-51 protein (CGI-51), mRNA. /FEA=mRNA /GEN=CGI-51 /PROD=CGI-51 protein /DB_XREF=gi:7661541 /UG=Hs.4877 CGI-51 protein /FL=gb:AF151809.1 gb:NM_015380.1 </td> <td> NM_015380 </td> <td> SAMM50 sorting and assembly machinery component </td> <td> SAMM50 </td> <td> 25813 </td> <td> NM_015380 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045040 // protein import into mitochondrial outer membrane // inferred from direct assay </td> <td> 0001401 // mitochondrial sorting and assembly machinery complex // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0019867 // outer membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 54.15 </td> <td> 229.80 </td> <td> 2.50 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 205463_s_at </td> <td> 205463_s_at </td> <td> NM_002607 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002607.1 /DEF=Homo sapiens platelet-derived growth factor alpha polypeptide (PDGFA), mRNA.  /FEA=mRNA /GEN=PDGFA /PROD=platelet-derived growth factor alphapolypeptide /DB_XREF=gi:4505678 /UG=Hs.37040 platelet-derived growth factor alpha polypeptide /FL=gb:NM_002607.1 </td> <td> NM_002607 </td> <td> platelet-derived growth factor alpha polypeptide </td> <td> PDGFA </td> <td> 5154 </td> <td> NM_002607 /// NM_033023 /// XM_005249770 /// XM_006715733 </td> <td> 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001775 // cell activation // traceable author statement /// 0001942 // hair follicle development // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0002576 // platelet degranulation // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009611 // response to wounding // inferred from direct assay /// 0009790 // embryo development // traceable author statement /// 0009887 // organ morphogenesis // inferred from sequence or structural similarity /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010512 // negative regulation of phosphatidylinositol biosynthetic process // inferred from direct assay /// 0010544 // negative regulation of platelet activation // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from direct assay /// 0014910 // regulation of smooth muscle cell migration // inferred from direct assay /// 0030031 // cell projection assembly // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // traceable author statement /// 0035793 // positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042060 // wound healing // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0043588 // skin development // inferred from sequence or structural similarity /// 0045087 // innate immune response // traceable author statement /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048286 // lung alveolus development // inferred from sequence or structural similarity /// 0048839 // inner ear development // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050919 // negative chemotaxis // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from direct assay /// 0060683 // regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0072124 // regulation of glomerular mesangial cell proliferation // inferred from direct assay /// 2000278 // regulation of DNA biosynthetic process // inferred from direct assay </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005902 // microvillus // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement </td> <td> 0005161 // platelet-derived growth factor receptor binding // inferred from direct assay /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from physical interaction </td> <td> 28.90 </td> <td> 117.35 </td> <td> 2.50 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202475_at </td> <td> 202475_at </td> <td> NM_006326 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006326.1 /DEF=Homo sapiens seven transmembrane domain protein (NIFIE14), mRNA. /FEA=mRNA /GEN=NIFIE14 /PROD=seven transmembrane domain protein /DB_XREF=gi:5453781 /UG=Hs.9234 seven transmembrane domain protein /FL=gb:BC001118.1 gb:NM_006326.1 </td> <td> NM_006326 </td> <td> transmembrane protein 147 </td> <td> TMEM147 </td> <td> 10430 </td> <td> NM_001242597 /// NM_001242598 /// NM_032635 </td> <td>  </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 41.07 </td> <td> 326.84 </td> <td> 2.50 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 48580_at </td> <td> 48580_at </td> <td> U55777 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. U55777:HSU55777 Homo sapiens cDNA /clone=37698 /gb=U55777 /gi=1354513 /ug=Hs.180933 /len=1593 </td> <td> U55777 </td> <td> CXXC finger protein 1 </td> <td> CXXC1 </td> <td> 30827 </td> <td> NM_001101654 /// NM_014593 /// XM_006722446 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0048188 // Set1C/COMPASS complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0045322 // unmethylated CpG binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 66.90 </td> <td> 204.80 </td> <td> 2.50 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212191_x_at </td> <td> 212191_x_at </td> <td> AW574664 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW574664 /FEA=EST /DB_XREF=gi:7246203 /DB_XREF=est:UI-HF-BL0-abw-d-10-0-UI.s1 /CLONE=IMAGE:3057859 /UG=Hs.180842 ribosomal protein L13 </td> <td> AW574664 </td> <td> ribosomal protein L13 /// small nucleolar RNA, C/D box 68 </td> <td> RPL13 /// SNORD68 </td> <td> 6137 /// 606500 </td> <td> NM_000977 /// NM_001243130 /// NM_001243131 /// NM_033251 /// NR_002450 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022626 // cytosolic ribosome // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -513.20 </td> <td> 1938.90 </td> <td> -2.50 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212456_at </td> <td> 212456_at </td> <td> AB014564 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB014564.1 /DEF=Homo sapiens mRNA for KIAA0664 protein, partial cds. /FEA=mRNA /GEN=KIAA0664 /PROD=KIAA0664 protein /DB_XREF=gi:3327141 /UG=Hs.22616 KIAA0664 protein </td> <td> AB014564 </td> <td> clustered mitochondria (cluA/CLU1) homolog </td> <td> CLUH </td> <td> 23277 </td> <td> NM_015229 /// XM_005256565 /// XM_005256567 /// XM_005256568 /// XM_006721491 /// XM_006721492 </td> <td> 0007005 // mitochondrion organization // inferred from electronic annotation /// 0048312 // intracellular distribution of mitochondria // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td>  </td> <td> 39.83 </td> <td> 94.64 </td> <td> 2.50 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200934_at </td> <td> 200934_at </td> <td> NM_003472 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003472.1 /DEF=Homo sapiens DEK oncogene (DNA binding) (DEK), mRNA. /FEA=mRNA /GEN=DEK /PROD=DEK oncogene (DNA binding) /DB_XREF=gi:4503248 /UG=Hs.110713 DEK oncogene (DNA binding) /FL=gb:NM_003472.1 </td> <td> NM_003472 </td> <td> DEK proto-oncogene </td> <td> DEK </td> <td> 7913 </td> <td> NM_001134709 /// NM_003472 /// XM_005249391 </td> <td> 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019079 // viral genome replication // traceable author statement /// 2000779 // regulation of double-strand break repair // inferred from mutant phenotype /// 2001032 // regulation of double-strand break repair via nonhomologous end joining // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -126.10 </td> <td> 448.93 </td> <td> -2.50 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 206405_x_at </td> <td> 206405_x_at </td> <td> NM_004505 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004505.1 /DEF=Homo sapiens ubiquitin specific protease 6 (Tre-2 oncogene) (USP6), mRNA.  /FEA=mRNA /GEN=USP6 /PROD=ubiquitin specific protease 6 /DB_XREF=gi:4758563 /UG=Hs.111065 ubiquitin specific protease 6 (Tre-2 oncogene) /FL=gb:NM_004505.1 </td> <td> NM_004505 </td> <td> ubiquitin specific peptidase 32 /// ubiquitin specific peptidase 6 </td> <td> USP32 /// USP6 </td> <td> 9098 /// 84669 </td> <td> NM_004505 /// NM_005152 /// NM_032582 /// XM_005256845 </td> <td> 0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0016579 // protein deubiquitination // traceable author statement /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0060627 // regulation of vesicle-mediated transport // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // traceable author statement /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 45.68 </td> <td> 89.11 </td> <td> 2.50 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 203320_at </td> <td> 203320_at </td> <td> NM_005475 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005475.1 /DEF=Homo sapiens lymphocyte adaptor protein (LNK), mRNA. /FEA=mRNA /GEN=LNK /PROD=lymphocyte adaptor protein /DB_XREF=gi:4885454 /UG=Hs.13131 lymphocyte adaptor protein /FL=gb:AF055581.1 gb:NM_005475.1 </td> <td> NM_005475 </td> <td> SH2B adaptor protein 3 </td> <td> SH2B3 </td> <td> 10019 </td> <td> NM_001291424 /// NM_005475 /// XM_005253818 /// XM_005253819 /// XM_006719180 </td> <td> 0007596 // blood coagulation // traceable author statement /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from electronic annotation </td> <td> 66.15 </td> <td> 626.85 </td> <td> 2.49 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 203081_at </td> <td> 203081_at </td> <td> NM_020248 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020248.1 /DEF=Homo sapiens beta-catenin-interacting protein ICAT (LOC56998), mRNA.  /FEA=mRNA /GEN=LOC56998 /PROD=beta-catenin-interacting protein ICAT /DB_XREF=gi:9910389 /UG=Hs.99816 beta-catenin-interacting protein ICAT /FL=gb:AB021262.1 gb:NM_020248.1 </td> <td> NM_020248 </td> <td> catenin, beta interacting protein 1 </td> <td> CTNNBIP1 </td> <td> 56998 </td> <td> NM_001012329 /// NM_020248 /// XM_006710779 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // not recorded /// 0002528 // regulation of vascular permeability involved in acute inflammatory response // inferred from mutant phenotype /// 0009952 // anterior/posterior pattern specification // not recorded /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // not recorded /// 0031333 // negative regulation of protein complex assembly // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0043392 // negative regulation of DNA binding // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0045657 // positive regulation of monocyte differentiation // inferred from mutant phenotype /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0060633 // negative regulation of transcription initiation from RNA polymerase II promoter // inferred from electronic annotation /// 0072201 // negative regulation of mesenchymal cell proliferation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0030877 // beta-catenin destruction complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0070016 // armadillo repeat domain binding // inferred from physical interaction </td> <td> 31.60 </td> <td> 38.98 </td> <td> 2.49 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202655_at </td> <td> 202655_at </td> <td> NM_006010 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006010.1 /DEF=Homo sapiens arginine-rich, mutated in early stage tumors (ARMET), mRNA.  /FEA=mRNA /GEN=ARMET /PROD=arginine-rich protein /DB_XREF=gi:5174392 /UG=Hs.75412 arginine-rich, mutated in early stage tumors /FL=gb:M83751.1 gb:NM_006010.1 </td> <td> NM_006010 </td> <td> mesencephalic astrocyte-derived neurotrophic factor </td> <td> MANF </td> <td> 7873 </td> <td> NM_006010 </td> <td> 0002014 // vasoconstriction of artery involved in ischemic response to lowering of systemic arterial blood pressure // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0008083 // growth factor activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 46.80 </td> <td> 417.35 </td> <td> 2.49 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 218213_s_at </td> <td> 218213_s_at </td> <td> NM_014206 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014206.1 /DEF=Homo sapiens chromosome 11 open reading frame 10 (C11orf10), mRNA. /FEA=mRNA /GEN=C11orf10 /PROD=chromosome 11 open reading frame 10 /DB_XREF=gi:7656933 /UG=Hs.90918 chromosome 11 open reading frame 10 /FL=gb:BC002750.1 gb:AF070661.1 gb:AF086763.1 gb:NM_014206.1 </td> <td> NM_014206 </td> <td> transmembrane protein 258 </td> <td> TMEM258 </td> <td> 746 </td> <td> NM_014206 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation </td> <td> -145.07 </td> <td> 1174.54 </td> <td> -2.49 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 210191_s_at </td> <td> 210191_s_at </td> <td> BC002447 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002447.1 /DEF=Homo sapiens, Similar to putative homeodomain transcription factor, clone MGC:1307, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to putative homeodomain transcriptionfactor /DB_XREF=gi:12803264 /UG=Hs.123637 putative homeodomain transcription factor /FL=gb:BC002447.1 </td> <td> BC002447 </td> <td> putative homeodomain transcription factor 1 </td> <td> PHTF1 </td> <td> 10745 </td> <td> NM_006608 /// XM_005270383 /// XM_005270384 /// XM_005270385 /// XM_005270387 /// XM_006710296 /// XM_006710297 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement </td> <td> 52.45 </td> <td> 123.95 </td> <td> 2.49 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200038_s_at </td> <td> 200038_s_at </td> <td> NM_000985 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000985.1 /DEF=Homo sapiens ribosomal protein L17 (RPL17), mRNA. /FEA=mRNA /GEN=RPL17 /PROD=ribosomal protein L17 /DB_XREF=gi:4506616 /UG=Hs.82202 ribosomal protein L17 /FL=gb:BC000502.1 gb:NM_000985.1 </td> <td> NM_000985 </td> <td> chromosome 18 open reading frame 32 /// ribosomal protein L17 /// RPL17-C18orf32 readthrough /// small nucleolar RNA, C/D box 58A /// small nucleolar RNA, C/D box 58B /// small nucleolar RNA, C/D box 58C </td> <td> C18orf32 /// RPL17 /// RPL17-C18orf32 /// SNORD58A /// SNORD58B /// SNORD58C </td> <td> 6139 /// 26790 /// 26791 /// 497661 /// 100124516 /// 100526842 </td> <td> NM_000985 /// NM_001035005 /// NM_001035006 /// NM_001199340 /// NM_001199341 /// NM_001199342 /// NM_001199343 /// NM_001199344 /// NM_001199345 /// NM_001199346 /// NM_001199355 /// NM_001199356 /// NR_002571 /// NR_002572 /// NR_003701 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015934 // large ribosomal subunit // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -401.13 </td> <td> 3014.91 </td> <td> -2.49 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 202858_at </td> <td> 202858_at </td> <td> NM_006758 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006758.1 /DEF=Homo sapiens U2(RNU2) small nuclear RNA auxillary factor 1 (non-standard symbol) (U2AF1), mRNA.  /FEA=mRNA /GEN=U2AF1 /PROD=U2 small nuclear RNA auxillary factor 1 /DB_XREF=gi:5803206 /UG=Hs.59271 U2(RNU2) small nuclear RNA auxillary factor 1 (non-standard symbol) /FL=gb:BC001177.1 gb:BC001923.1 gb:M96982.1 gb:NM_006758.1 </td> <td> NM_006758 </td> <td> U2 small nuclear RNA auxiliary factor 1 </td> <td> U2AF1 </td> <td> 7307 </td> <td> NM_001025203 /// NM_001025204 /// NM_006758 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // traceable author statement /// 0016607 // nuclear speck // inferred from sequence or structural similarity /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050733 // RS domain binding // inferred from electronic annotation </td> <td> -328.05 </td> <td> 908.40 </td> <td> -2.49 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 208753_s_at </td> <td> 208753_s_at </td> <td> BC002387 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002387.1 /DEF=Homo sapiens, nucleosome assembly protein 1-like 1, clone MGC:8688, mRNA, complete cds.  /FEA=mRNA /PROD=nucleosome assembly protein 1-like 1 /DB_XREF=gi:12803166 /UG=Hs.179662 nucleosome assembly protein 1-like 1 /FL=gb:BC002387.1 gb:AL162068.1 </td> <td> BC002387 </td> <td> nucleosome assembly protein 1-like 1 </td> <td> NAP1L1 </td> <td> 4673 </td> <td> NM_004537 /// NM_139207 /// XM_005268895 /// XM_005268896 /// XM_006719422 /// XM_006719423 /// XM_006719424 /// XM_006719425 /// XR_245930 /// XR_245931 /// XR_245932 </td> <td> 0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 83.30 </td> <td> 346.60 </td> <td> 2.48 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 214007_s_at </td> <td> 214007_s_at </td> <td> AW665024 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW665024 /FEA=EST /DB_XREF=gi:7457569 /DB_XREF=est:hi86c09.x1 /CLONE=IMAGE:2979184 /UG=Hs.82643 protein tyrosine kinase 9 </td> <td> AW665024 </td> <td> twinfilin actin-binding protein 1 </td> <td> TWF1 </td> <td> 5756 </td> <td> NM_001242397 /// NM_002822 /// NM_198974 /// NR_073472 /// NR_073473 </td> <td> 0030837 // negative regulation of actin filament polymerization // inferred from sequence or structural similarity /// 0042989 // sequestering of actin monomers // inferred from sequence or structural similarity /// 0043538 // regulation of actin phosphorylation // inferred from direct assay /// 0051016 // barbed-end actin filament capping // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0030016 // myofibril // inferred from sequence or structural similarity /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0032587 // ruffle membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from sequence or structural similarity /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity </td> <td> -46.12 </td> <td> 193.74 </td> <td> -2.48 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 222033_s_at </td> <td> 222033_s_at </td> <td> AA058828 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA058828 /FEA=EST /DB_XREF=gi:1551654 /DB_XREF=est:zf66f10.s1 /CLONE=IMAGE:381931 /UG=Hs.138671 fms-related tyrosine kinase 1 (vascular endothelial growth factorvascular permeability factor receptor) </td> <td> AA058828 </td> <td> fms-related tyrosine kinase 1 </td> <td> FLT1 </td> <td> 2321 </td> <td> NM_001159920 /// NM_001160030 /// NM_001160031 /// NM_002019 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0002548 // monocyte chemotaxis // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010863 // positive regulation of phospholipase C activity // inferred from mutant phenotype /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0036323 // vascular endothelial growth factor receptor-1 signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048514 // blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048598 // embryonic morphogenesis // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0036326 // VEGF-A-activated receptor activity // inferred from direct assay /// 0036327 // VEGF-B-activated receptor activity // inferred from direct assay /// 0036332 // placental growth factor-activated receptor activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> -25.20 </td> <td> 92.47 </td> <td> -2.48 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201490_s_at </td> <td> 201490_s_at </td> <td> NM_005729 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005729.1 /DEF=Homo sapiens peptidylprolyl isomerase F (cyclophilin F) (PPIF), mRNA.  /FEA=mRNA /GEN=PPIF /PROD=peptidylprolyl isomerase F (cyclophilin F) /DB_XREF=gi:5031986 /UG=Hs.173125 peptidylprolyl isomerase F (cyclophilin F) /FL=gb:BC005020.1 gb:M80254.1 gb:NM_005729.1 </td> <td> NM_005729 </td> <td> peptidylprolyl isomerase F </td> <td> PPIF </td> <td> 10105 </td> <td> NM_005729 /// XM_005269379 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0002931 // response to ischemia // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0010849 // regulation of proton-transporting ATPase activity, rotational mechanism // inferred from sequence or structural similarity /// 0010939 // regulation of necrotic cell death // inferred from electronic annotation /// 0010940 // positive regulation of necrotic cell death // inferred from electronic annotation /// 0012501 // programmed cell death // inferred from electronic annotation /// 0032780 // negative regulation of ATPase activity // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0046902 // regulation of mitochondrial membrane permeability // inferred from sequence or structural similarity /// 0070301 // cellular response to hydrogen peroxide // inferred from mutant phenotype /// 0071243 // cellular response to arsenic-containing substance // inferred from sequence or structural similarity /// 0071277 // cellular response to calcium ion // inferred from sequence or structural similarity /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0090324 // negative regulation of oxidative phosphorylation // inferred from sequence or structural similarity /// 1902445 // regulation of mitochondrial membrane permeability involved in programmed necrotic cell death // inferred from mutant phenotype /// 2000276 // negative regulation of oxidative phosphorylation uncoupler activity // inferred from sequence or structural similarity /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0016020 // membrane // traceable author statement </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016018 // cyclosporin A binding // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation </td> <td> 38.60 </td> <td> 117.65 </td> <td> 2.48 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 206099_at </td> <td> 206099_at </td> <td> NM_006255 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006255.1 /DEF=Homo sapiens protein kinase C, eta (PRKCH), mRNA. /FEA=mRNA /GEN=PRKCH /PROD=protein kinase C, eta /DB_XREF=gi:5453971 /UG=Hs.315366 protein kinase C, eta /FL=gb:M55284.1 gb:NM_006255.1 </td> <td> NM_006255 </td> <td> protein kinase C, eta </td> <td> PRKCH </td> <td> 5583 </td> <td> NM_006255 </td> <td> 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0034351 // negative regulation of glial cell apoptotic process // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0045618 // positive regulation of keratinocyte differentiation // inferred from sequence or structural similarity /// 0050861 // positive regulation of B cell receptor signaling pathway // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0060252 // positive regulation of glial cell proliferation // inferred from mutant phenotype /// 0070528 // protein kinase C signaling // inferred from electronic annotation /// 2000810 // regulation of tight junction assembly // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // traceable author statement /// 0004699 // calcium-independent protein kinase C activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017160 // Ral GTPase binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 89.98 </td> <td> 252.29 </td> <td> 2.48 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201258_at </td> <td> 201258_at </td> <td> NM_001020 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001020.1 /DEF=Homo sapiens ribosomal protein S16 (RPS16), mRNA. /FEA=mRNA /GEN=RPS16 /PROD=ribosomal protein S16 /DB_XREF=gi:4506690 /UG=Hs.80617 ribosomal protein S16 /FL=gb:BC004324.1 gb:M60854.1 gb:NM_001020.1 </td> <td> NM_001020 </td> <td> ribosomal protein S16 </td> <td> RPS16 </td> <td> 6217 </td> <td> NM_001020 /// XM_005259137 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -486.90 </td> <td> 1940.42 </td> <td> -2.48 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201108_s_at </td> <td> 201108_s_at </td> <td> BF055462 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF055462 /FEA=EST /DB_XREF=gi:10809358 /DB_XREF=est:7j80e06.x1 /CLONE=IMAGE:3392770 /UG=Hs.87409 thrombospondin 1 /FL=gb:NM_003246.1 </td> <td> BF055462 </td> <td> thrombospondin 1 </td> <td> THBS1 </td> <td> 7057 </td> <td> NM_003246 </td> <td> 0000187 // activation of MAPK activity // inferred from mutant phenotype /// 0001666 // response to hypoxia // non-traceable author statement /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001953 // negative regulation of cell-matrix adhesion // inferred from direct assay /// 0002040 // sprouting angiogenesis // inferred from mutant phenotype /// 0002544 // chronic inflammatory response // inferred from expression pattern /// 0002576 // platelet degranulation // traceable author statement /// 0002581 // negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from direct assay /// 0002605 // negative regulation of dendritic cell antigen processing and presentation // inferred from direct assay /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from expression pattern /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007155 // cell adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from direct assay /// 0010748 // negative regulation of plasma membrane long-chain fatty acid transport // inferred from direct assay /// 0010751 // negative regulation of nitric oxide mediated signal transduction // inferred from direct assay /// 0010754 // negative regulation of cGMP-mediated signaling // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from direct assay /// 0010759 // positive regulation of macrophage chemotaxis // inferred from sequence or structural similarity /// 0010763 // positive regulation of fibroblast migration // inferred from direct assay /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0018149 // peptide cross-linking // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from direct assay /// 0032570 // response to progesterone // traceable author statement /// 0032695 // negative regulation of interleukin-12 production // inferred from direct assay /// 0032914 // positive regulation of transforming growth factor beta1 production // inferred from sequence or structural similarity /// 0033574 // response to testosterone // inferred from electronic annotation /// 0034605 // cellular response to heat // non-traceable author statement /// 0034976 // response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from expression pattern /// 0042535 // positive regulation of tumor necrosis factor biosynthetic process // inferred from direct assay /// 0043032 // positive regulation of macrophage activation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043652 // engulfment of apoptotic cell // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0048266 // behavioral response to pain // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050921 // positive regulation of chemotaxis // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0051895 // negative regulation of focal adhesion assembly // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling // inferred from direct assay /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071636 // positive regulation of transforming growth factor beta production // inferred from electronic annotation /// 1900119 // positive regulation of execution phase of apoptosis // inferred from direct assay /// 1902043 // positive regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005577 // fibrinogen complex // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from sequence or structural similarity /// 0030141 // secretory granule // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // traceable author statement /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001786 // phosphatidylserine binding // inferred from direct assay /// 0001948 // glycoprotein binding // non-traceable author statement /// 0001968 // fibronectin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from mutant phenotype /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0030169 // low-density lipoprotein particle binding // inferred from direct assay /// 0042802 // identical protein binding // non-traceable author statement /// 0043236 // laminin binding // inferred from direct assay /// 0043394 // proteoglycan binding // traceable author statement /// 0050431 // transforming growth factor beta binding // inferred from sequence or structural similarity /// 0050431 // transforming growth factor beta binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation /// 0070051 // fibrinogen binding // inferred from direct assay /// 0070052 // collagen V binding // inferred from direct assay </td> <td> -266.15 </td> <td> 2683.72 </td> <td> -2.48 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 211966_at </td> <td> 211966_at </td> <td> AA909035 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA909035 /FEA=EST /DB_XREF=gi:3048440 /DB_XREF=est:ol11h01.s1 /CLONE=IMAGE:1523185 /UG=Hs.75617 collagen, type IV, alpha 2 </td> <td> AA909035 </td> <td> collagen, type IV, alpha 2 </td> <td> COL4A2 </td> <td> 1284 </td> <td> NM_001846 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // non-traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // traceable author statement /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005587 // collagen type IV trimer // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005201 // extracellular matrix structural constituent // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -230.08 </td> <td> 782.46 </td> <td> -2.47 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 221613_s_at </td> <td> 221613_s_at </td> <td> AL136598 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136598.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564F2116 (from clone DKFZp564F2116); complete cds.  /FEA=mRNA /GEN=DKFZp564F2116 /PROD=hypothetical protein /DB_XREF=gi:13276696 /UG=Hs.83954 protein associated with PRK1 /FL=gb:AL136598.1 </td> <td> AL136598 </td> <td> zinc finger, AN1-type domain 6 </td> <td> ZFAND6 </td> <td> 54469 </td> <td> NM_001242911 /// NM_001242912 /// NM_001242913 /// NM_001242914 /// NM_001242915 /// NM_001242916 /// NM_001242917 /// NM_001242918 /// NM_001242919 /// NM_019006 /// XM_006720574 </td> <td> 0006625 // protein targeting to peroxisome // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043122 // regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0071356 // cellular response to tumor necrosis factor // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -94.70 </td> <td> 385.93 </td> <td> -2.47 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 221502_at </td> <td> 221502_at </td> <td> AL120704 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL120704 /FEA=EST /DB_XREF=gi:5926603 /DB_XREF=est:DKFZp762C1712_r1 /CLONE=DKFZp762C1712 /UG=Hs.3886 karyopherin alpha 3 (importin alpha 4) /FL=gb:D89618.1 gb:AF034756.1 gb:NM_002267.1 </td> <td> AL120704 </td> <td> karyopherin alpha 3 (importin alpha 4) </td> <td> KPNA3 </td> <td> 3839 </td> <td> NM_002267 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0046718 // viral entry into host cell // inferred from electronic annotation /// 0075732 // viral penetration into host nucleus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> 52.12 </td> <td> 397.24 </td> <td> 2.47 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 200030_s_at </td> <td> 200030_s_at </td> <td> NM_002635 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002635.1 /DEF=Homo sapiens solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 (SLC25A3), nuclear gene encoding mitochondrial protein, transcript variant 1b, mRNA.  /FEA=mRNA /GEN=SLC25A3 /PROD=phosphate carrier precursor isoform 1b /DB_XREF=gi:4505774 /UG=Hs.78713 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 /FL=gb:BC000998.1 gb:BC001328.1 gb:BC003504.1 gb:BC004345.1 gb:NM_002635.1 </td> <td> NM_002635 </td> <td> solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 </td> <td> SLC25A3 </td> <td> 5250 </td> <td> NM_002635 /// NM_005888 /// NM_213611 /// NM_213612 </td> <td> 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006810 // transport // traceable author statement /// 0035435 // phosphate ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0015293 // symporter activity // inferred from electronic annotation /// 0015320 // phosphate ion carrier activity // traceable author statement /// 0032403 // protein complex binding // inferred from direct assay </td> <td> -387.07 </td> <td> 2572.71 </td> <td> -2.47 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 221725_at </td> <td> 221725_at </td> <td> AI962978 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI962978 /FEA=EST /DB_XREF=gi:5755691 /DB_XREF=est:wt25f05.x1 /CLONE=IMAGE:2508513 /UG=Hs.288908 WAS protein family, member 2 /FL=gb:NM_006990.1 gb:AB026542.1 </td> <td> AI962978 </td> <td> WAS protein family, member 2 </td> <td> WASF2 </td> <td> 10163 </td> <td> NM_001201404 /// NM_006990 </td> <td> 0001505 // regulation of neurotransmitter levels // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0010592 // positive regulation of lamellipodium assembly // inferred from mutant phenotype /// 0016601 // Rac protein signal transduction // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from electronic annotation /// 0035855 // megakaryocyte development // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051497 // negative regulation of stress fiber assembly // inferred from mutant phenotype /// 0072673 // lamellipodium morphogenesis // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0031209 // SCAR complex // inferred from mutant phenotype /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0004969 // histamine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from direct assay /// 0032403 // protein complex binding // inferred from mutant phenotype </td> <td> 52.87 </td> <td> 293.94 </td> <td> 2.47 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 213503_x_at </td> <td> 213503_x_at </td> <td> BE908217 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE908217 /FEA=EST /DB_XREF=gi:10402569 /DB_XREF=est:601500477F1 /CLONE=IMAGE:3902323 /UG=Hs.217493 annexin A2 </td> <td> BE908217 </td> <td> annexin A2 </td> <td> ANXA2 </td> <td> 302 </td> <td> NM_001002857 /// NM_001002858 /// NM_001136015 /// NM_004039 </td> <td> 0001525 // angiogenesis // inferred from expression pattern /// 0001765 // membrane raft assembly // inferred from mutant phenotype /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006900 // membrane budding // inferred from mutant phenotype /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0031340 // positive regulation of vesicle fusion // inferred from direct assay /// 0036035 // osteoclast development // inferred from direct assay /// 0042730 // fibrinolysis // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0051099 // positive regulation of binding // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from direct assay /// 0071229 // cellular response to acid // inferred from electronic annotation /// 0072661 // protein targeting to plasma membrane // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019897 // extrinsic component of plasma membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031902 // late endosome membrane // inferred from direct assay /// 0031982 // vesicle // inferred from electronic annotation /// 0035749 // myelin sheath adaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044354 // macropinosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from mutant phenotype /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0019834 // phospholipase A2 inhibitor activity // inferred from direct assay /// 0044548 // S100 protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> -777.70 </td> <td> 3920.30 </td> <td> -2.47 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212253_x_at </td> <td> 212253_x_at </td> <td> BG253119 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG253119 /FEA=EST /DB_XREF=gi:12762935 /DB_XREF=est:602363756F1 /CLONE=IMAGE:4472293 /UG=Hs.198689 KIAA0728 protein </td> <td> BG253119 </td> <td> dystonin </td> <td> DST </td> <td> 667 </td> <td> NM_001144769 /// NM_001144770 /// NM_001144771 /// NM_001723 /// NM_015548 /// NM_020388 /// NM_183380 /// XM_005249310 /// XM_005249311 /// XM_005249312 /// XM_005249313 /// XM_005249314 /// XM_005249315 /// XM_005249316 /// XM_005249317 /// XM_005249318 /// XM_005249319 /// XM_005249320 /// XM_005249322 /// XM_005249323 /// XM_005249324 /// XM_005249325 /// XM_005249326 /// XM_006715169 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from direct assay /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006620 // posttranslational protein targeting to membrane // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008090 // retrograde axon cargo transport // inferred from electronic annotation /// 0009611 // response to wounding // inferred from direct assay /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030011 // maintenance of cell polarity // inferred from mutant phenotype /// 0030198 // extracellular matrix organization // traceable author statement /// 0031110 // regulation of microtubule polymerization or depolymerization // inferred from electronic annotation /// 0031122 // cytoplasmic microtubule organization // inferred from electronic annotation /// 0031581 // hemidesmosome assembly // inferred from direct assay /// 0045104 // intermediate filament cytoskeleton organization // inferred from expression pattern /// 0045104 // intermediate filament cytoskeleton organization // inferred from sequence or structural similarity /// 0045104 // intermediate filament cytoskeleton organization // non-traceable author statement /// 0048870 // cell motility // inferred from mutant phenotype /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005604 // basement membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0009925 // basal plasma membrane // non-traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030018 // Z disc // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from direct assay /// 0030056 // hemidesmosome // traceable author statement /// 0030424 // axon // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay /// 0031673 // H zone // inferred from electronic annotation /// 0035371 // microtubule plus-end // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay /// 0060053 // neurofilament cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016887 // ATPase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from direct assay </td> <td> -41.05 </td> <td> 68.10 </td> <td> -2.47 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 209440_at </td> <td> 209440_at </td> <td> BC001605 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001605.1 /DEF=Homo sapiens, phosphoribosyl pyrophosphate synthetase 1, clone MGC:2256, mRNA, complete cds.  /FEA=mRNA /PROD=phosphoribosyl pyrophosphate synthetase 1 /DB_XREF=gi:12804406 /UG=Hs.56 phosphoribosyl pyrophosphate synthetase 1 /FL=gb:BC001605.1 gb:D00860.1 </td> <td> BC001605 </td> <td> phosphoribosyl pyrophosphate synthetase 1 </td> <td> PRPS1 </td> <td> 5631 </td> <td> NM_001204402 /// NM_002764 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006015 // 5-phosphoribose 1-diphosphate biosynthetic process // inferred from electronic annotation /// 0006015 // 5-phosphoribose 1-diphosphate biosynthetic process // traceable author statement /// 0006144 // purine nucleobase metabolic process // inferred from mutant phenotype /// 0006164 // purine nucleotide biosynthetic process // inferred from mutant phenotype /// 0006167 // AMP biosynthetic process // inferred from electronic annotation /// 0006221 // pyrimidine nucleotide biosynthetic process // non-traceable author statement /// 0007399 // nervous system development // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0009156 // ribonucleoside monophosphate biosynthetic process // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019693 // ribose phosphate metabolic process // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0034418 // urate biosynthetic process // inferred from mutant phenotype /// 0044249 // cellular biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046101 // hypoxanthine biosynthetic process // inferred from mutant phenotype </td> <td> 0002189 // ribose phosphate diphosphokinase complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004749 // ribose phosphate diphosphokinase activity // not recorded /// 0004749 // ribose phosphate diphosphokinase activity // inferred from direct assay /// 0004749 // ribose phosphate diphosphokinase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0016208 // AMP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043531 // ADP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 41.15 </td> <td> 155.32 </td> <td> 2.47 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201568_at </td> <td> 201568_at </td> <td> NM_014402 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014402.1 /DEF=Homo sapiens low molecular mass ubiquinone-binding protein (9.5kD) (QP-C), mRNA.  /FEA=mRNA /GEN=QP-C /PROD=low molecular mass ubiquinone-binding protein /DB_XREF=gi:7657485 /UG=Hs.3709 low molecular mass ubiquinone-binding protein (9.5kD) /FL=gb:BC001390.1 gb:D50369.1 gb:NM_014402.1 </td> <td> NM_014402 </td> <td> ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa </td> <td> UQCRQ </td> <td> 27089 </td> <td> NM_014402 </td> <td> 0021539 // subthalamus development // inferred from electronic annotation /// 0021548 // pons development // inferred from electronic annotation /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021794 // thalamus development // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021860 // pyramidal neuron development // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0030901 // midbrain development // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008121 // ubiquinol-cytochrome-c reductase activity // inferred from electronic annotation </td> <td> 62.50 </td> <td> 703.62 </td> <td> 2.47 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212197_x_at </td> <td> 212197_x_at </td> <td> AB020671 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB020671.1 /DEF=Homo sapiens mRNA for KIAA0864 protein, partial cds. /FEA=mRNA /GEN=KIAA0864 /PROD=KIAA0864 protein /DB_XREF=gi:4240216 /UG=Hs.84883 KIAA0864 protein </td> <td> AB020671 </td> <td> myosin phosphatase Rho interacting protein </td> <td> MPRIP </td> <td> 23164 </td> <td> NM_015134 /// NM_201274 /// XM_005256563 /// XM_005256564 /// XM_006721487 /// XM_006721488 /// XM_006721489 /// XM_006721490 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> -105.03 </td> <td> 484.09 </td> <td> -2.47 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201039_s_at </td> <td> 201039_s_at </td> <td> BF572938 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF572938 /FEA=EST /DB_XREF=gi:11646661 /DB_XREF=est:602078949F2 /CLONE=IMAGE:4253100 /UG=Hs.180455 RAD23 (S. cerevisiae) homolog A /FL=gb:NM_005053.1 gb:D21235.1 </td> <td> BF572938 </td> <td> RAD23 homolog A (S. cerevisiae) </td> <td> RAD23A </td> <td> 5886 </td> <td> NM_001270362 /// NM_001270363 /// NM_005053 /// NR_072976 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay /// 1990381 // ubiquitin-specific protease binding // inferred from physical interaction </td> <td> -38.47 </td> <td> 151.99 </td> <td> -2.46 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212808_at </td> <td> 212808_at </td> <td> AI884627 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI884627 /FEA=EST /DB_XREF=gi:5589791 /DB_XREF=est:wl59b11.x1 /CLONE=IMAGE:2429181 /UG=Hs.274417 PTD017 protein </td> <td> AI884627 </td> <td> nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein </td> <td> NFATC2IP </td> <td> 84901 </td> <td> NM_032815 </td> <td> 0001816 // cytokine production // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 41.08 </td> <td> 55.16 </td> <td> 2.46 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 201312_s_at </td> <td> 201312_s_at </td> <td> NM_003022 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003022.1 /DEF=Homo sapiens SH3 domain binding glutamic acid-rich protein like (SH3BGRL), mRNA.  /FEA=mRNA /GEN=SH3BGRL /PROD=SH3 domain binding glutamic acid-rich proteinlike /DB_XREF=gi:4506924 /UG=Hs.14368 SH3 domain binding glutamic acid-rich protein like /FL=gb:AL136718.1 gb:AF042081.1 gb:NM_003022.1 </td> <td> NM_003022 </td> <td> SH3 domain binding glutamate-rich protein like </td> <td> SH3BGRL </td> <td> 6451 </td> <td> NM_003022 </td> <td> 0009967 // positive regulation of signal transduction // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation </td> <td> 105.33 </td> <td> 406.09 </td> <td> 2.46 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 217717_s_at </td> <td> 217717_s_at </td> <td> BF246499 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF246499 /FEA=EST /DB_XREF=gi:11160924 /DB_XREF=est:601854744F1 /CLONE=IMAGE:4074659 /UG=Hs.182238 GW128 protein /FL=gb:AF107406.1 gb:NM_014052.1 </td> <td> BF246499 </td> <td> tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta </td> <td> YWHAB </td> <td> 7529 </td> <td> NM_003404 /// NM_139323 </td> <td> 0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0006605 // protein targeting // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0035308 // negative regulation of protein dephosphorylation // inferred from direct assay /// 0035329 // hippo signaling // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051220 // cytoplasmic sequestering of protein // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0050815 // phosphoserine binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from physical interaction </td> <td> 95.25 </td> <td> 652.70 </td> <td> 2.46 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.52 </td> </tr>
  <tr> <td> 212246_at </td> <td> 212246_at </td> <td> BE880828 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE880828 /FEA=EST /DB_XREF=gi:10329604 /DB_XREF=est:601493261F1 /CLONE=IMAGE:3895407 /UG=Hs.84775 Human transposon-like element mRNA </td> <td> BE880828 </td> <td> multiple coagulation factor deficiency 2 </td> <td> MCFD2 </td> <td> 90411 </td> <td> NM_001171506 /// NM_001171507 /// NM_001171508 /// NM_001171509 /// NM_001171510 /// NM_001171511 /// NM_139279 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 31.75 </td> <td> 136.40 </td> <td> 2.46 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201304_at </td> <td> 201304_at </td> <td> NM_005000 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005000.2 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 (13kD, B13) (NDUFA5), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=NDUFA5 /PROD=NADH dehydrogenase (ubiquinone) 1 alphasubcomplex, 5 /DB_XREF=gi:13699821 /UG=Hs.83916 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 (13kD, B13) /FL=gb:BC000813.1 gb:NM_005000.2 gb:U53468.1 gb:U64028.1 </td> <td> NM_005000 </td> <td> NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 </td> <td> NDUFA5 </td> <td> 4698 </td> <td> NM_001282419 /// NM_001282420 /// NM_001282421 /// NM_001282422 /// NM_001291304 /// NM_005000 /// NR_104168 /// NR_104169 /// NR_111925 /// NR_111926 /// XM_005250371 /// XR_426239 /// XR_428243 /// XR_432226 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0016651 // oxidoreductase activity, acting on NAD(P)H // inferred from electronic annotation </td> <td> 49.15 </td> <td> 127.83 </td> <td> 2.46 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.53 </td> </tr>
  <tr> <td> 213649_at </td> <td> 213649_at </td> <td> AA524053 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA524053 /FEA=EST /DB_XREF=gi:2264981 /DB_XREF=est:ng33b07.s1 /CLONE=IMAGE:936565 /UG=Hs.184167 splicing factor, arginineserine-rich 7 (35kD) </td> <td> AA524053 </td> <td> serine/arginine-rich splicing factor 7 </td> <td> SRSF7 </td> <td> 6432 </td> <td> NM_001031684 /// NM_001195446 /// NM_006276 /// XM_005264484 /// XM_005264485 /// XM_005264486 /// XR_426994 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -35.32 </td> <td> 118.71 </td> <td> -2.46 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202416_at </td> <td> 202416_at </td> <td> NM_003315 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003315.1 /DEF=Homo sapiens tetratricopeptide repeat domain 2 (TTC2), mRNA. /FEA=mRNA /GEN=TTC2 /PROD=tetratricopeptide repeat domain 2 /DB_XREF=gi:4507712 /UG=Hs.5542 DnaJ (Hsp40) homolog, subfamily C, member 7 /FL=gb:U46571.1 gb:NM_003315.1 </td> <td> NM_003315 </td> <td> DnaJ (Hsp40) homolog, subfamily C, member 7 </td> <td> DNAJC7 </td> <td> 7266 </td> <td> NM_001144766 /// NM_003315 /// NR_029431 /// XM_006722050 /// XM_006722051 /// XM_006722052 /// XM_006722053 /// XM_006722054 </td> <td> 0006457 // protein folding // traceable author statement /// 0070389 // chaperone cofactor-dependent protein refolding // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from physical interaction </td> <td> 38.85 </td> <td> 154.78 </td> <td> 2.46 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200888_s_at </td> <td> 200888_s_at </td> <td> NM_000978 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000978.1 /DEF=Homo sapiens ribosomal protein L23 (RPL23), mRNA. /FEA=mRNA /GEN=RPL23 /PROD=ribosomal protein L23 /DB_XREF=gi:4506604 /UG=Hs.234518 ribosomal protein L23 /FL=gb:NM_000978.1 </td> <td> NM_000978 </td> <td> ribosomal protein L23 /// small nucleolar RNA, H/ACA box 21 </td> <td> RPL23 /// SNORA21 </td> <td> 9349 /// 619505 </td> <td> NM_000978 /// NR_002576 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006610 // ribosomal protein import into nucleus // non-traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -350.00 </td> <td> 1898.47 </td> <td> -2.45 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201737_s_at </td> <td> 201737_s_at </td> <td> NM_005885 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005885.1 /DEF=Homo sapiens similar to S. cerevisiae SSM4 (TEB4), mRNA. /FEA=mRNA /GEN=TEB4 /PROD=similar to S. cerevisiae SSM4 /DB_XREF=gi:5032166 /UG=Hs.20141 similar to S. cerevisiae SSM4 /FL=gb:AF009301.1 gb:NM_005885.1 </td> <td> NM_005885 </td> <td> membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase </td> <td> MARCH6 </td> <td> 10299 </td> <td> NM_001270660 /// NM_001270661 /// NM_005885 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0031624 // ubiquitin conjugating enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 47.05 </td> <td> 94.53 </td> <td> 2.45 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200659_s_at </td> <td> 200659_s_at </td> <td> NM_002634 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002634.2 /DEF=Homo sapiens prohibitin (PHB), mRNA. /FEA=mRNA /GEN=PHB /PROD=prohibitin /DB_XREF=gi:6031190 /UG=Hs.75323 prohibitin /FL=gb:NM_002634.2 </td> <td> NM_002634 </td> <td> prohibitin </td> <td> PHB </td> <td> 5245 </td> <td> NM_001281496 /// NM_001281497 /// NM_001281715 /// NM_002634 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0016575 // histone deacetylation // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0042981 // regulation of apoptotic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0050847 // progesterone receptor signaling pathway // inferred from direct assay /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from direct assay /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 0071354 // cellular response to interleukin-6 // inferred from direct assay /// 0071897 // DNA biosynthetic process // inferred from electronic annotation /// 2000323 // negative regulation of glucocorticoid receptor signaling pathway // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay </td> <td> 37.40 </td> <td> 75.95 </td> <td> 2.45 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.53 </td> </tr>
  <tr> <td> 219296_at </td> <td> 219296_at </td> <td> NM_019028 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019028.1 /DEF=Homo sapiens hypothetical protein similar to ankyrin repeat-containing priotein AKR1 (FLJ10852), mRNA.  /FEA=mRNA /GEN=FLJ10852 /PROD=hypothetical protein similar to ankyrinrepeat-containing priotein AKR1 /DB_XREF=gi:9506622 /UG=Hs.95744 hypothetical protein similar to ankyrin repeat-containing priotein AKR1 /FL=gb:NM_019028.1 </td> <td> NM_019028 </td> <td> zinc finger, DHHC-type containing 13 </td> <td> ZDHHC13 </td> <td> 54503 </td> <td> NM_001001483 /// NM_019028 /// XM_005252996 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from sequence or structural similarity /// 0015693 // magnesium ion transport // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015095 // magnesium ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0016409 // palmitoyltransferase activity // inferred from sequence or structural similarity /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019706 // protein-cysteine S-palmitoyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 53.17 </td> <td> 124.16 </td> <td> 2.45 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208652_at </td> <td> 208652_at </td> <td> BC000400 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000400.1 /DEF=Homo sapiens, protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform, clone MGC:8533, mRNA, complete cds.  /FEA=mRNA /PROD=protein phosphatase 2 (formerly 2A), catalyticsubunit, alpha isoform /DB_XREF=gi:12653262 /UG=Hs.91773 protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform /FL=gb:BC000400.1 gb:BC002657.1 gb:J03804.1 gb:M36951.1 gb:NM_002715.1 </td> <td> BC000400 </td> <td> protein phosphatase 2, catalytic subunit, alpha isozyme </td> <td> PPP2CA </td> <td> 5515 </td> <td> NM_002715 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000188 // inactivation of MAPK activity // non-traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006275 // regulation of DNA replication // non-traceable author statement /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006470 // protein dephosphorylation // traceable author statement /// 0006672 // ceramide metabolic process // non-traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0007084 // mitotic nuclear envelope reassembly // traceable author statement /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // non-traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010033 // response to organic substance // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019932 // second-messenger-mediated signaling // non-traceable author statement /// 0030111 // regulation of Wnt signaling pathway // non-traceable author statement /// 0030155 // regulation of cell adhesion // non-traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0031952 // regulation of protein autophosphorylation // inferred from electronic annotation /// 0040008 // regulation of growth // non-traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042518 // negative regulation of tyrosine phosphorylation of Stat3 protein // non-traceable author statement /// 0045595 // regulation of cell differentiation // non-traceable author statement /// 0070208 // protein heterotrimerization // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from mutant phenotype </td> <td> 0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // traceable author statement /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // non-traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -81.55 </td> <td> 609.95 </td> <td> -2.45 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.53 </td> </tr>
  <tr> <td> 210296_s_at </td> <td> 210296_s_at </td> <td> BC005375 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005375.1 /DEF=Homo sapiens, peroxisomal membrane protein 3 (35kD, Zellweger syndrome), clone MGC:12491, mRNA, complete cds.  /FEA=mRNA /PROD=peroxisomal membrane protein 3 (35kD, Zellwegersyndrome) /DB_XREF=gi:13529226 /UG=Hs.180612 peroxisomal membrane protein 3 (35kD, Zellweger syndrome) /FL=gb:BC005375.1 </td> <td> BC005375 </td> <td> peroxisomal biogenesis factor 2 </td> <td> PEX2 </td> <td> 5828 </td> <td> NM_000318 /// NM_001079867 /// NM_001172086 /// NM_001172087 </td> <td> 0000038 // very long-chain fatty acid metabolic process // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001764 // neuron migration // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from mutant phenotype /// 0006699 // bile acid biosynthetic process // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from mutant phenotype /// 0007399 // nervous system development // inferred from electronic annotation /// 0016558 // protein import into peroxisome matrix // inferred from mutant phenotype /// 0031648 // protein destabilization // inferred from mutant phenotype /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0045540 // regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype </td> <td> 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005779 // integral component of peroxisomal membrane // inferred from mutant phenotype /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016593 // Cdc73/Paf1 complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 28.20 </td> <td> 82.12 </td> <td> 2.45 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.53 </td> </tr>
  <tr> <td> 214724_at </td> <td> 214724_at </td> <td> AF070621 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF070621.1 /DEF=Homo sapiens clone 24760 mRNA sequence. /FEA=mRNA /DB_XREF=gi:3283887 /UG=Hs.61408 Homo sapiens mRNA for KIAA1735 protein, partial cds </td> <td> AF070621 </td> <td> DIX domain containing 1 </td> <td> DIXDC1 </td> <td> 85458 </td> <td> NM_001037954 /// NM_001278542 /// NM_033425 /// XM_005277726 /// XM_005277727 /// XM_005277728 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0021695 // cerebellar cortex development // not recorded /// 0021795 // cerebral cortex cell migration // inferred from electronic annotation /// 0021799 // cerebral cortex radially oriented cell migration // inferred from electronic annotation /// 0021846 // cell proliferation in forebrain // inferred from electronic annotation /// 0021869 // forebrain ventricular zone progenitor cell division // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from electronic annotation /// 0030900 // forebrain development // not recorded /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0043010 // camera-type eye development // not recorded /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // not recorded /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // not recorded /// 0060071 // Wnt signaling pathway, planar cell polarity pathway // not recorded /// 0070507 // regulation of microtubule cytoskeleton organization // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // not recorded /// 0030054 // cell junction // inferred from electronic annotation /// 0043025 // neuronal cell body // not recorded /// 0043234 // protein complex // inferred from electronic annotation /// 0043679 // axon terminus // not recorded </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // not recorded /// 0043015 // gamma-tubulin binding // inferred from direct assay </td> <td> 42.25 </td> <td> 102.85 </td> <td> 2.44 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.53 </td> </tr>
  <tr> <td> 212433_x_at </td> <td> 212433_x_at </td> <td> AA630314 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA630314 /FEA=EST /DB_XREF=gi:2552925 /DB_XREF=est:ac08f07.s1 /CLONE=IMAGE:855877 /UG=Hs.182426 ribosomal protein S2 </td> <td> AA630314 </td> <td> ribosomal protein S2 /// small nucleolar RNA, H/ACA box 64 </td> <td> RPS2 /// SNORA64 </td> <td> 6187 /// 26784 </td> <td> NM_002952 /// NR_002326 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051347 // positive regulation of transferase activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -478.18 </td> <td> 3553.36 </td> <td> -2.44 </td> <td> 0.04 </td> <td> 0.07 </td> <td> -4.53 </td> </tr>
  <tr> <td> 218061_at </td> <td> 218061_at </td> <td> NM_014623 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014623.1 /DEF=Homo sapiens male-enhanced antigen (MEA), mRNA. /FEA=mRNA /GEN=MEA /PROD=male-enhanced antigen /DB_XREF=gi:7657325 /UG=Hs.278362 male-enhanced antigen /FL=gb:BC001754.1 gb:M27937.1 gb:L10400.1 gb:NM_014623.1 </td> <td> NM_014623 </td> <td> male-enhanced antigen 1 </td> <td> MEA1 </td> <td> 4201 </td> <td> NM_014623 /// XM_005249121 /// XM_005249122 /// XM_005249123 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 47.80 </td> <td> 190.43 </td> <td> 2.44 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 209607_x_at </td> <td> 209607_x_at </td> <td> U08032 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U08032.1 /DEF=Human thermolabile (monoamine, M form) phenol sulfotransferase (STM) mRNA, complete cds.  /FEA=mRNA /GEN=STM /PROD=thermolabile (monoamine, M form) phenolsulfotransferase /DB_XREF=gi:468256 /UG=Hs.274614 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3 /FL=gb:NM_003166.1 gb:L19956.1 gb:U34199.1 gb:U08032.1 </td> <td> U08032 </td> <td> sulfotransferase 1A3/1A4-like /// SLX1A-SULT1A3 readthrough (NMD candidate) /// SLX1B-SULT1A4 readthrough (NMD candidate) /// sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3 /// sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4 </td> <td> LOC101929857 /// SLX1A-SULT1A3 /// SLX1B-SULT1A4 /// SULT1A3 /// SULT1A4 </td> <td> 6818 /// 445329 /// 100526830 /// 100526831 /// 101929857 </td> <td> NM_001017387 /// NM_001017389 /// NM_001017390 /// NM_001017391 /// NM_003166 /// NM_177552 /// NR_037608 /// NR_037609 /// XM_005276506 /// XM_005276507 /// XM_006726621 </td> <td> 0006584 // catecholamine metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0009812 // flavonoid metabolic process // inferred from direct assay /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement /// 0051923 // sulfation // inferred from direct assay </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0004062 // aryl sulfotransferase activity // traceable author statement /// 0008146 // sulfotransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -33.43 </td> <td> 115.64 </td> <td> -2.44 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 204288_s_at </td> <td> 204288_s_at </td> <td> NM_021069 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021069.1 /DEF=Homo sapiens ArgAbl-interacting protein ArgBP2 (ARGBP2), transcript variant 2, mRNA.  /FEA=mRNA /GEN=ARGBP2 /PROD=ArgAbl-interacting protein 2, isoform 2 /DB_XREF=gi:10947117 /UG=Hs.278626 ArgAbl-interacting protein ArgBP2 /FL=gb:NM_021069.1 gb:AB018320.1 </td> <td> NM_021069 </td> <td> sorbin and SH3 domain containing 2 </td> <td> SORBS2 </td> <td> 8470 </td> <td> NM_001145670 /// NM_001145671 /// NM_001145672 /// NM_001145673 /// NM_001145674 /// NM_001145675 /// NM_001270771 /// NM_003603 /// NM_021069 /// XM_005263302 /// XM_005263305 /// XM_005263306 /// XM_005263307 /// XM_005263308 /// XM_005263310 /// XM_005263311 /// XM_005263312 /// XM_005263313 /// XM_006714345 /// XM_006714346 /// XM_006714347 /// XM_006714348 /// XM_006714349 /// XM_006714350 /// XM_006714351 /// XM_006714352 /// XM_006714353 /// XM_006714354 /// XM_006714355 /// XM_006714356 /// XM_006714357 /// XM_006714358 /// XM_006714359 /// XM_006714360 /// XM_006714361 /// XM_006714362 /// XM_006714363 /// XM_006714364 /// XM_006714365 /// XM_006714366 /// XM_006714367 /// XM_006714368 /// XM_006714369 /// XM_006714370 /// XM_006714371 /// XM_006714372 /// XM_006714373 /// XM_006714374 /// XM_006714375 /// XM_006714376 /// XM_006714377 /// XM_006714378 /// XM_006714379 /// XM_006714380 /// XM_006714381 /// XM_006714382 /// XM_006714383 /// XM_006714384 /// XM_006714385 /// XM_006714386 /// XM_006714387 /// XM_006714388 /// XM_006714389 /// XM_006714390 </td> <td> 0007015 // actin filament organization // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0008307 // structural constituent of muscle // traceable author statement /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 32.22 </td> <td> 108.09 </td> <td> 2.43 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208756_at </td> <td> 208756_at </td> <td> U36764 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U36764.1 /DEF=Human TGF-beta receptor interacting protein 1 mRNA, complete cds. /FEA=mRNA /PROD=TGF-beta receptor interacting protein 1 /DB_XREF=gi:1036804 /UG=Hs.192023 eukaryotic translation initiation factor 3, subunit 2 (beta, 36kD) /FL=gb:U36764.1 gb:BC000413.1 gb:BC003140.1 gb:U39067.1 gb:NM_003757.1 gb:AF116697.1 </td> <td> U36764 </td> <td> eukaryotic translation initiation factor 3, subunit I </td> <td> EIF3I </td> <td> 8668 </td> <td> NM_003757 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> -93.78 </td> <td> 547.54 </td> <td> -2.43 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 216060_s_at </td> <td> 216060_s_at </td> <td> AK021890 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK021890.1 /DEF=Homo sapiens cDNA FLJ11828 fis, clone HEMBA1006507, weakly similar to DIAPHANOUS PROTEIN HOMOLOG 2.  /FEA=mRNA /DB_XREF=gi:10433178 /UG=Hs.197751 KIAA0666 protein </td> <td> AK021890 </td> <td> dishevelled associated activator of morphogenesis 1 </td> <td> DAAM1 </td> <td> 23002 </td> <td> NM_001270520 /// NM_014992 /// XM_005267430 /// XM_005267431 /// XR_429298 </td> <td> 0016043 // cellular component organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -47.33 </td> <td> 121.56 </td> <td> -2.43 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201840_at </td> <td> 201840_at </td> <td> NM_006156 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006156.1 /DEF=Homo sapiens neural precursor cell expressed, developmentally down-regulated 8 (NEDD8), mRNA.  /FEA=mRNA /GEN=NEDD8 /PROD=neural precursor cell expressed, developmentallydown-regulated 8 /DB_XREF=gi:5453759 /UG=Hs.75512 neural precursor cell expressed, developmentally down-regulated 8 /FL=gb:D23662.1 gb:NM_006156.1 </td> <td> NM_006156 </td> <td> neural precursor cell expressed, developmentally down-regulated 8 </td> <td> NEDD8 </td> <td> 4738 </td> <td> NM_006156 </td> <td> 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0045116 // protein neddylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> 153.40 </td> <td> 466.52 </td> <td> 2.43 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 41220_at </td> <td> 41220_at </td> <td> AB023208 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AB023208:Homo sapiens mRNA for KIAA0991 protein, complete cds /cds=(732,2000) /gb=AB023208 /gi=4589625 /ug=Hs.181002 /len=3938 </td> <td> AB023208 </td> <td> septin 9 </td> <td> SEPT9 </td> <td> 10801 </td> <td> NM_001113491 /// NM_001113492 /// NM_001113493 /// NM_001113494 /// NM_001113495 /// NM_001113496 /// NM_001293695 /// NM_001293696 /// NM_001293697 /// NM_001293698 /// NM_006640 /// XM_005256959 /// XM_005256960 /// XM_005256961 /// XM_005256962 /// XM_006721643 /// XM_006721644 </td> <td> 0006184 // GTP catabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0031105 // septin complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 108.38 </td> <td> 316.46 </td> <td> 2.43 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201757_at </td> <td> 201757_at </td> <td> NM_004552 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004552.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) Fe-S protein 5 (15kD) (NADH-coenzyme Q reductase) (NDUFS5), mRNA.  /FEA=mRNA /GEN=NDUFS5 /PROD=NADH dehydrogenase (ubiquinone) Fe-S protein 5(15kD) (NADH-coenzyme Q reductase) /DB_XREF=gi:4758789 /UG=Hs.80595 NADH dehydrogenase (ubiquinone) Fe-S protein 5 (15kD) (NADH-coenzyme Q reductase) /FL=gb:BC001884.1 gb:AF020352.1 gb:AF047434.1 gb:NM_004552.1 </td> <td> NM_004552 </td> <td> NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase) /// ribosomal protein L10 </td> <td> NDUFS5 /// RPL10 </td> <td> 4725 /// 6134 </td> <td> NM_001184979 /// NM_001256577 /// NM_001256580 /// NM_004552 /// NM_006013 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype /// 0044237 // cellular metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 203.07 </td> <td> 1400.24 </td> <td> 2.43 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202984_s_at </td> <td> 202984_s_at </td> <td> AA457021 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA457021 /FEA=EST /DB_XREF=gi:2179741 /DB_XREF=est:aa38a08.s1 /CLONE=IMAGE:815510 /UG=Hs.5443 BCL2-associated athanogene 5 /FL=gb:AF095195.2 gb:NM_004873.1 </td> <td> AA457021 </td> <td> BCL2-associated athanogene 5 </td> <td> BAG5 </td> <td> 9529 </td> <td> NM_001015048 /// NM_001015049 /// NM_004873 </td> <td> 0006457 // protein folding // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0051444 // negative regulation of ubiquitin-protein transferase activity // inferred from sequence or structural similarity /// 0061084 // negative regulation of protein refolding // inferred from sequence or structural similarity /// 0070997 // neuron death // inferred from sequence or structural similarity /// 0090083 // regulation of inclusion body assembly // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0031625 // ubiquitin protein ligase binding // inferred from sequence or structural similarity /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> 28.42 </td> <td> 53.96 </td> <td> 2.43 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208856_x_at </td> <td> 208856_x_at </td> <td> BC003655 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003655.1 /DEF=Homo sapiens, ribosomal protein, large, P0, clone MGC:4770, mRNA, complete cds.  /FEA=mRNA /PROD=ribosomal protein, large, P0 /DB_XREF=gi:13177771 /UG=Hs.73742 ribosomal protein, large, P0 /FL=gb:BC000087.1 gb:BC003655.1 </td> <td> BC003655 </td> <td> ribosomal protein, large, P0 </td> <td> RPLP0 </td> <td> 6175 </td> <td> NM_001002 /// NM_053275 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -888.00 </td> <td> 4610.30 </td> <td> -2.43 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201587_s_at </td> <td> 201587_s_at </td> <td> NM_001569 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001569.2 /DEF=Homo sapiens interleukin-1 receptor-associated kinase 1 (IRAK1), mRNA.  /FEA=mRNA /GEN=IRAK1 /PROD=interleukin-1 receptor-associated kinase 1 /DB_XREF=gi:4755143 /UG=Hs.182018 interleukin-1 receptor-associated kinase 1 /FL=gb:L76191.1 gb:NM_001569.2 </td> <td> NM_001569 </td> <td> interleukin-1 receptor-associated kinase 1 </td> <td> IRAK1 </td> <td> 3654 </td> <td> NM_001025242 /// NM_001025243 /// NM_001569 /// XM_005274668 </td> <td> 0000187 // activation of MAPK activity // traceable author statement /// 0001959 // regulation of cytokine-mediated signaling pathway // inferred from mutant phenotype /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // non-traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from mutant phenotype /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0032494 // response to peptidoglycan // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from mutant phenotype /// 0034134 // toll-like receptor 2 signaling pathway // inferred from mutant phenotype /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // non-traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051259 // protein oligomerization // inferred from mutant phenotype /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070498 // interleukin-1-mediated signaling pathway // inferred from mutant phenotype /// 0070555 // response to interleukin-1 // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005811 // lipid particle // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0045323 // interleukin-1 receptor complex // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004704 // NF-kappaB-inducing kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005149 // interleukin-1 receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042803 // protein homodimerization activity // non-traceable author statement /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> 61.93 </td> <td> 317.94 </td> <td> 2.43 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 213969_x_at </td> <td> 213969_x_at </td> <td> BF683426 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF683426 /FEA=EST /DB_XREF=gi:11968834 /DB_XREF=est:602139603F1 /CLONE=IMAGE:4300777 /UG=Hs.183698 ribosomal protein L29 </td> <td> BF683426 </td> <td> ribosomal protein L29 </td> <td> RPL29 </td> <td> 6159 </td> <td> NM_000992 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007566 // embryo implantation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -292.70 </td> <td> 2286.22 </td> <td> -2.43 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 218226_s_at </td> <td> 218226_s_at </td> <td> NM_004547 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004547.2 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4 (15kD, B15) (NDUFB4), mRNA.  /FEA=mRNA /GEN=NDUFB4 /PROD=NADH dehydrogenase (ubiquinone) 1 betasubcomplex, 4 (15kD, B15) /DB_XREF=gi:6041668 /UG=Hs.227750 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4 (15kD, B15) /FL=gb:BC000855.1 gb:AF044957.1 gb:NM_004547.2 </td> <td> NM_004547 </td> <td> NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa </td> <td> NDUFB4 </td> <td> 4710 </td> <td> NM_001168331 /// NM_004547 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006979 // response to oxidative stress // inferred from direct assay /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> 97.93 </td> <td> 874.49 </td> <td> 2.42 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 213347_x_at </td> <td> 213347_x_at </td> <td> AW132023 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW132023 /FEA=EST /DB_XREF=gi:6133630 /DB_XREF=est:xe71b05.x1 /CLONE=IMAGE:2613297 /UG=Hs.108124 ribosomal protein S4, X-linked </td> <td> AW132023 </td> <td> ribosomal protein S4, X-linked </td> <td> RPS4X </td> <td> 6191 </td> <td> NM_001007 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007275 // multicellular organismal development // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from direct assay /// 0005844 // polysome // inferred from direct assay /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from mutant phenotype /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -520.60 </td> <td> 3004.75 </td> <td> -2.42 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 212334_at </td> <td> 212334_at </td> <td> BE880245 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE880245 /FEA=EST /DB_XREF=gi:10329021 /DB_XREF=est:601490612F1 /CLONE=IMAGE:3893018 /UG=Hs.164036 Homo sapiens AKAP350C mRNA sequence, alternatively spliced </td> <td> BE880245 </td> <td> glucosamine (N-acetyl)-6-sulfatase </td> <td> GNS </td> <td> 2799 </td> <td> NM_002076 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006027 // glycosaminoglycan catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0042339 // keratan sulfate metabolic process // traceable author statement /// 0042340 // keratan sulfate catabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005764 // lysosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 47.62 </td> <td> 254.56 </td> <td> 2.42 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208929_x_at </td> <td> 208929_x_at </td> <td> BC004954 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004954.1 /DEF=Homo sapiens, clone MGC:10897, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:10897) /DB_XREF=gi:13436331 /UG=Hs.180842 ribosomal protein L13 /FL=gb:BC000851.1 gb:BC004954.1 gb:NM_000977.1 </td> <td> BC004954 </td> <td> ribosomal protein L13 /// small nucleolar RNA, C/D box 68 </td> <td> RPL13 /// SNORD68 </td> <td> 6137 /// 606500 </td> <td> NM_000977 /// NM_001243130 /// NM_001243131 /// NM_033251 /// NR_002450 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022626 // cytosolic ribosome // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -534.05 </td> <td> 2276.62 </td> <td> -2.42 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201418_s_at </td> <td> 201418_s_at </td> <td> NM_003107 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003107.1 /DEF=Homo sapiens SRY (sex determining region Y)-box 4 (SOX4), mRNA. /FEA=mRNA /GEN=SOX4 /PROD=SRY (sex determining region Y)-box 4 /DB_XREF=gi:4507162 /UG=Hs.83484 SRY (sex determining region Y)-box 4 /FL=gb:NM_003107.1 </td> <td> NM_003107 </td> <td> SRY (sex determining region Y)-box 4 </td> <td> SOX4 </td> <td> 6659 </td> <td> NM_003107 </td> <td> 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001841 // neural tube formation // inferred from sequence or structural similarity /// 0002328 // pro-B cell differentiation // inferred from sequence or structural similarity /// 0003183 // mitral valve morphogenesis // inferred from sequence or structural similarity /// 0003211 // cardiac ventricle formation // inferred from sequence or structural similarity /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0003289 // atrial septum primum morphogenesis // inferred from sequence or structural similarity /// 0003357 // noradrenergic neuron differentiation // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0014009 // glial cell proliferation // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021522 // spinal cord motor neuron differentiation // inferred from sequence or structural similarity /// 0021782 // glial cell development // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035910 // ascending aorta morphogenesis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042769 // DNA damage response, detection of DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046826 // negative regulation of protein export from nucleus // inferred from mutant phenotype /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0060070 // canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 0060174 // limb bud formation // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060548 // negative regulation of cell death // inferred from sequence or structural similarity /// 0060563 // neuroepithelial cell differentiation // inferred from sequence or structural similarity /// 0060993 // kidney morphogenesis // inferred from sequence or structural similarity /// 0071333 // cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 2000761 // positive regulation of N-terminal peptidyl-lysine acetylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0001071 // nucleic acid binding transcription factor activity // inferred from mutant phenotype /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> -81.60 </td> <td> 216.60 </td> <td> -2.42 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208853_s_at </td> <td> 208853_s_at </td> <td> L18887 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L18887.1 /DEF=Human calnexin mRNA, complete cds. /FEA=mRNA /PROD=calnexin /DB_XREF=gi:306480 /UG=Hs.155560 calnexin /FL=gb:NM_001746.1 gb:BC003552.1 gb:M94859.1 gb:M98452.1 gb:L10284.1 gb:L18887.1 </td> <td> L18887 </td> <td> calnexin </td> <td> CANX </td> <td> 821 </td> <td> NM_001024649 /// NM_001746 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0009306 // protein secretion // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048488 // synaptic vesicle endocytosis // inferred from sequence or structural similarity /// 0061077 // chaperone-mediated protein folding // inferred from electronic annotation /// 0072583 // clathrin-mediated endocytosis // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0001948 // glycoprotein binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0034185 // apolipoprotein binding // inferred from electronic annotation /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -184.45 </td> <td> 707.88 </td> <td> -2.42 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 217286_s_at </td> <td> 217286_s_at </td> <td> BC001805 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BC001805.1 /DEF=Homo sapiens, clone IMAGE:3543670, mRNA, partial cds. /FEA=mRNA /PROD=Unknown (protein for IMAGE:3543670) /DB_XREF=gi:12804742 /UG=Hs.240615 hypothetical protein FLJ13556 similar to N-myc downstream regulated 3 </td> <td> BC001805 </td> <td> NDRG family member 3 </td> <td> NDRG3 </td> <td> 57446 </td> <td> NM_022477 /// NM_032013 /// NR_038370 /// XM_006723837 /// XM_006723838 </td> <td> 0007283 // spermatogenesis // non-traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> 69.87 </td> <td> 99.26 </td> <td> 2.42 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 203857_s_at </td> <td> 203857_s_at </td> <td> NM_006810 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006810.1 /DEF=Homo sapiens for protein disulfide isomerase-related (PDIR), mRNA. /FEA=mRNA /GEN=PDIR /PROD=for protein disulfide isomerase-related /DB_XREF=gi:5803120 /UG=Hs.76901 for protein disulfide isomerase-related /FL=gb:D49490.1 gb:NM_006810.1 </td> <td> NM_006810 </td> <td> microRNA 7110 /// protein disulfide isomerase family A, member 5 </td> <td> MIR7110 /// PDIA5 </td> <td> 10954 /// 102465667 </td> <td> NM_006810 /// NR_028444 /// NR_106960 /// XR_427359 /// XR_427360 </td> <td> 0006457 // protein folding // not recorded /// 0006457 // protein folding // traceable author statement /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006950 // response to stress // inferred from sequence or structural similarity /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0034976 // response to endoplasmic reticulum stress // not recorded /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // not recorded /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement </td> <td> 0003756 // protein disulfide isomerase activity // not recorded /// 0003756 // protein disulfide isomerase activity // traceable author statement /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016209 // antioxidant activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation </td> <td> -110.17 </td> <td> 520.09 </td> <td> -2.42 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 38671_at </td> <td> 38671_at </td> <td> AB014520 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AB014520:Homo sapiens mRNA for KIAA0620 protein, partial cds /cds=(0,5957) /gb=AB014520 /gi=3327053 /ug=Hs.105958 /len=6754 </td> <td> AB014520 </td> <td> plexin D1 </td> <td> PLXND1 </td> <td> 23129 </td> <td> NM_015103 </td> <td> 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0030334 // regulation of cell migration // inferred from sequence or structural similarity /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0043542 // endothelial cell migration // inferred from sequence or structural similarity /// 0045765 // regulation of angiogenesis // inferred from sequence or structural similarity /// 0060666 // dichotomous subdivision of terminal units involved in salivary gland branching // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay </td> <td> 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017154 // semaphorin receptor activity // inferred from sequence or structural similarity /// 0019904 // protein domain specific binding // inferred from physical interaction </td> <td> -65.87 </td> <td> 615.41 </td> <td> -2.42 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 211765_x_at </td> <td> 211765_x_at </td> <td> BC005982 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005982.1 /DEF=Homo sapiens, peptidylprolyl isomerase A (cyclophilin A), clone MGC:14681, mRNA, complete cds.  /FEA=mRNA /PROD=peptidylprolyl isomerase A (cyclophilin A) /DB_XREF=gi:13543665 /FL=gb:BC005982.1 </td> <td> BC005982 </td> <td> peptidylprolyl isomerase A (cyclophilin A) </td> <td> PPIA </td> <td> 5478 </td> <td> NM_021130 /// NM_203430 /// NM_203431 /// XM_005249791 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0002576 // platelet degranulation // traceable author statement /// 0006278 // RNA-dependent DNA replication // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019061 // uncoating of virus // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019076 // viral release from host cell // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030260 // entry into host cell // traceable author statement /// 0034389 // lipid particle organization // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // traceable author statement /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0075713 // establishment of integrated proviral latency // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046790 // virion binding // non-traceable author statement /// 0051082 // unfolded protein binding // traceable author statement </td> <td> -1167.80 </td> <td> 4810.38 </td> <td> -2.41 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 213423_x_at </td> <td> 213423_x_at </td> <td> AI884858 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI884858 /FEA=EST /DB_XREF=gi:5590022 /DB_XREF=est:wl85f06.x1 /CLONE=IMAGE:2431715 /UG=Hs.71119 Putative prostate cancer tumor suppressor </td> <td> AI884858 </td> <td> tumor suppressor candidate 3 </td> <td> TUSC3 </td> <td> 7991 </td> <td> NM_006765 /// NM_178234 /// XM_005273646 /// XM_005273647 /// XM_005273648 </td> <td> 0006487 // protein N-linked glycosylation // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015693 // magnesium ion transport // inferred from genetic interaction /// 0015693 // magnesium ion transport // inferred from mutant phenotype /// 0018279 // protein N-linked glycosylation via asparagine // inferred from sequence or structural similarity /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0050890 // cognition // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0008250 // oligosaccharyltransferase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from sequence or structural similarity /// 0015095 // magnesium ion transmembrane transporter activity // inferred from mutant phenotype </td> <td> 43.50 </td> <td> 137.30 </td> <td> 2.41 </td> <td> 0.04 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202468_s_at </td> <td> 202468_s_at </td> <td> NM_003798 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003798.1 /DEF=Homo sapiens catenin (cadherin-associated protein), alpha-like 1 (CTNNAL1), mRNA.  /FEA=mRNA /GEN=CTNNAL1 /PROD=catenin (cadherin-associated protein),alpha-like 1 /DB_XREF=gi:4503128 /UG=Hs.58488 catenin (cadherin-associated protein), alpha-like 1 /FL=gb:AF006070.1 gb:U97067.1 gb:AF080071.1 gb:AF030233.1 gb:NM_003798.1 </td> <td> NM_003798 </td> <td> catenin (cadherin-associated protein), alpha-like 1 </td> <td> CTNNAL1 </td> <td> 8727 </td> <td> NM_001286974 /// NM_003798 /// XM_005252291 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from electronic annotation </td> <td> 95.07 </td> <td> 387.89 </td> <td> 2.41 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208662_s_at </td> <td> 208662_s_at </td> <td> AI885338 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI885338 /FEA=EST /DB_XREF=gi:5590502 /DB_XREF=est:wl92e09.x1 /CLONE=IMAGE:2432392 /UG=Hs.118174 tetratricopeptide repeat domain 3 /FL=gb:D84294.1 </td> <td> AI885338 </td> <td> tetratricopeptide repeat domain 3 /// tetratricopeptide repeat domain 3 pseudogene 1 </td> <td> TTC3 /// TTC3P1 </td> <td> 7267 /// 286495 </td> <td> NM_001001894 /// NM_003316 /// NR_030737 /// XM_005261045 /// XM_005261046 /// XM_005261047 /// XM_005261048 /// XM_005261049 /// XM_005261050 /// XM_005261051 /// XM_005261052 /// XM_005261053 /// XM_005261054 /// XM_005261055 /// XM_005261056 /// XM_005261058 </td> <td> 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0010771 // negative regulation of cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005773 // vacuole // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 46.07 </td> <td> 363.16 </td> <td> 2.41 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 210762_s_at </td> <td> 210762_s_at </td> <td> AF026219 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF026219.1 /DEF=Homo sapiens HP protein (HP) mRNA, complete cds. /FEA=mRNA /GEN=HP /PROD=HP protein /DB_XREF=gi:2559001 /UG=Hs.8700 deleted in liver cancer 1 /FL=gb:AF026219.1 gb:AF035119.1 gb:NM_006094.2 </td> <td> AF026219 </td> <td> DLC1 Rho GTPase activating protein </td> <td> DLC1 </td> <td> 10395 </td> <td> NM_001164271 /// NM_006094 /// NM_024767 /// NM_182643 /// XM_005273374 /// XM_005273375 </td> <td> 0001843 // neural tube closure // inferred from sequence or structural similarity /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0021575 // hindbrain morphogenesis // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030900 // forebrain development // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from mutant phenotype /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035024 // negative regulation of Rho protein signal transduction // inferred from mutant phenotype /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from sequence or structural similarity /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051497 // negative regulation of stress fiber assembly // inferred from direct assay /// 1900119 // positive regulation of execution phase of apoptosis // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005100 // Rho GTPase activator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0030675 // Rac GTPase activator activity // inferred from direct assay /// 0042169 // SH2 domain binding // inferred from physical interaction </td> <td> -126.37 </td> <td> 678.89 </td> <td> -2.41 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 203255_at </td> <td> 203255_at </td> <td> NM_018693 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018693.1 /DEF=Homo sapiens vitiligo-associated protein VIT-1 (VIT1), mRNA. /FEA=mRNA /GEN=VIT1 /PROD=vitiligo-associated protein VIT-1 /DB_XREF=gi:10048403 /UG=Hs.284289 vitiligo-associated protein VIT-1 /FL=gb:NM_018693.1 gb:AF264714.1 </td> <td> NM_018693 </td> <td> F-box protein 11 </td> <td> FBXO11 </td> <td> 80204 </td> <td> NM_001190274 /// NM_012167 /// NM_018693 /// NM_025133 /// XM_005264572 /// XM_005264573 /// XM_005264574 </td> <td> 0006464 // cellular protein modification process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016567 // protein ubiquitination // non-traceable author statement /// 0035246 // peptidyl-arginine N-methylation // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016274 // protein-arginine N-methyltransferase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 39.42 </td> <td> 70.81 </td> <td> 2.41 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 218125_s_at </td> <td> 218125_s_at </td> <td> NM_018246 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018246.1 /DEF=Homo sapiens hypothetical protein FLJ10853 (FLJ10853), mRNA. /FEA=mRNA /GEN=FLJ10853 /PROD=hypothetical protein FLJ10853 /DB_XREF=gi:8922717 /UG=Hs.72085 hypothetical protein FLJ10853 /FL=gb:NM_018246.1 </td> <td> NM_018246 </td> <td> coiled-coil domain containing 25 </td> <td> CCDC25 </td> <td> 55246 </td> <td> NM_018246 /// XM_005273563 </td> <td>  </td> <td> 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> 26.45 </td> <td> 84.50 </td> <td> 2.41 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201676_x_at </td> <td> 201676_x_at </td> <td> NM_002786 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002786.1 /DEF=Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 (PSMA1), mRNA.  /FEA=mRNA /GEN=PSMA1 /PROD=proteasome (prosome, macropain) subunit, alphatype, 1 /DB_XREF=gi:4506178 /UG=Hs.82159 proteasome (prosome, macropain) subunit, alpha type, 1 /FL=gb:BC002577.1 gb:NM_002786.1 </td> <td> NM_002786 </td> <td> proteasome (prosome, macropain) subunit, alpha type, 1 </td> <td> PSMA1 </td> <td> 5682 </td> <td> NM_001143937 /// NM_002786 /// NM_148976 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002862 // negative regulation of inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0005844 // polysome // traceable author statement /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001530 // lipopolysaccharide binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -215.68 </td> <td> 1362.16 </td> <td> -2.41 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 211720_x_at </td> <td> 211720_x_at </td> <td> BC005863 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005863.1 /DEF=Homo sapiens, ribosomal protein, large, P0, clone MGC:3679, mRNA, complete cds.  /FEA=mRNA /PROD=ribosomal protein, large, P0 /DB_XREF=gi:13543411 /FL=gb:BC005863.1 </td> <td> BC005863 </td> <td> ribosomal protein, large, P0 </td> <td> RPLP0 </td> <td> 6175 </td> <td> NM_001002 /// NM_053275 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -880.27 </td> <td> 4563.69 </td> <td> -2.41 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 211160_x_at </td> <td> 211160_x_at </td> <td> M95178 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M95178.1 /DEF=Human non-muscle alpha-actinin mRNA, complete cds. /FEA=mRNA /GEN=ACTN1 /PROD=alpha-actinin /DB_XREF=gi:178051 /UG=Hs.119000 actinin, alpha 1 /FL=gb:M95178.1 </td> <td> M95178 </td> <td> actinin, alpha 1 </td> <td> ACTN1 </td> <td> 87 </td> <td> NM_001102 /// NM_001130004 /// NM_001130005 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0048041 // focal adhesion assembly // inferred from mutant phenotype /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051271 // negative regulation of cellular component movement // inferred from mutant phenotype /// 0051764 // actin crosslink formation // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from mutant phenotype /// 0016020 // membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031143 // pseudopodium // traceable author statement /// 0042995 // cell projection // inferred from direct assay /// 0043197 // dendritic spine // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017166 // vinculin binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation </td> <td> 100.45 </td> <td> 438.68 </td> <td> 2.41 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 211345_x_at </td> <td> 211345_x_at </td> <td> AF119850 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF119850.1 /DEF=Homo sapiens PRO1608 mRNA, complete cds. /FEA=mRNA /PROD=PRO1608 /DB_XREF=gi:7770136 /UG=Hs.2186 eukaryotic translation elongation factor 1 gamma /FL=gb:AF119850.1 </td> <td> AF119850 </td> <td> eukaryotic translation elongation factor 1 gamma /// microRNA 3654 </td> <td> EEF1G /// MIR3654 </td> <td> 1937 /// 100500804 </td> <td> NM_001404 /// NR_037427 </td> <td> 0006412 // translation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005853 // eukaryotic translation elongation factor 1 complex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -582.22 </td> <td> 3208.24 </td> <td> -2.40 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200689_x_at </td> <td> 200689_x_at </td> <td> NM_001404 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001404.1 /DEF=Homo sapiens eukaryotic translation elongation factor 1 gamma (EEF1G), mRNA.  /FEA=mRNA /GEN=EEF1G /PROD=eukaryotic translation elongation factor 1gamma /DB_XREF=gi:4503480 /UG=Hs.2186 eukaryotic translation elongation factor 1 gamma /FL=gb:BC000384.1 gb:BC004189.1 gb:BC004215.1 gb:NM_001404.1 </td> <td> NM_001404 </td> <td> eukaryotic translation elongation factor 1 gamma /// microRNA 3654 </td> <td> EEF1G /// MIR3654 </td> <td> 1937 /// 100500804 </td> <td> NM_001404 /// NR_037427 </td> <td> 0006412 // translation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005853 // eukaryotic translation elongation factor 1 complex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -558.93 </td> <td> 3091.44 </td> <td> -2.40 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 209135_at </td> <td> 209135_at </td> <td> AF289489 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF289489.1 /DEF=Homo sapiens aspartyl beta-hydroxylase 2.8 kb transcript mRNA, complete cds; alternatively spliced.  /FEA=mRNA /PROD=aspartyl beta-hydroxylase 2.8 kb transcript /DB_XREF=gi:11878115 /UG=Hs.283664 aspartate beta-hydroxylase /FL=gb:AF289489.1 </td> <td> AF289489 </td> <td> aspartate beta-hydroxylase </td> <td> ASPH </td> <td> 444 </td> <td> NM_001164750 /// NM_001164751 /// NM_001164752 /// NM_001164753 /// NM_001164754 /// NM_001164755 /// NM_001164756 /// NM_004318 /// NM_020164 /// NM_032466 /// NM_032467 /// NM_032468 /// XM_005251235 /// XM_005251236 /// XM_005251238 /// XM_005251239 /// XM_005251240 /// XM_005251241 /// XM_005251242 /// XM_005251243 /// XM_005251244 /// XM_005251246 /// XM_005251247 /// XM_005251248 /// XM_005251249 /// XM_005251250 /// XM_006716448 /// XM_006716449 </td> <td> 0005513 // detection of calcium ion // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from direct assay /// 0010649 // regulation of cell communication by electrical coupling // traceable author statement /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // traceable author statement /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred from sequence or structural similarity /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // traceable author statement /// 0018193 // peptidyl-amino acid modification // inferred from electronic annotation /// 0031585 // regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from direct assay /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032237 // activation of store-operated calcium channel activity // inferred from direct assay /// 0033198 // response to ATP // inferred from direct assay /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0042264 // peptidyl-aspartic acid hydroxylation // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060316 // positive regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0090316 // positive regulation of intracellular protein transport // inferred from direct assay /// 0097202 // activation of cysteine-type endopeptidase activity // inferred from direct assay /// 1901879 // regulation of protein depolymerization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // non-traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0014701 // junctional sarcoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay /// 0032541 // cortical endoplasmic reticulum // inferred from direct assay /// 0033017 // sarcoplasmic reticulum membrane // traceable author statement /// 0033018 // sarcoplasmic reticulum lumen // traceable author statement /// 0034704 // calcium channel complex // traceable author statement </td> <td> 0004597 // peptide-aspartate beta-dioxygenase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0044325 // ion channel binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> 56.43 </td> <td> 164.46 </td> <td> 2.40 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 203037_s_at </td> <td> 203037_s_at </td> <td> NM_014751 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014751.1 /DEF=Homo sapiens KIAA0429 gene product (KIAA0429), mRNA. /FEA=mRNA /GEN=KIAA0429 /PROD=KIAA0429 gene product /DB_XREF=gi:7662113 /UG=Hs.77694 KIAA0429 gene product /FL=gb:AB007889.1 gb:NM_014751.1 </td> <td> NM_014751 </td> <td> metastasis suppressor 1 </td> <td> MTSS1 </td> <td> 9788 </td> <td> NM_001282971 /// NM_001282974 /// NM_014751 /// XM_005251111 /// XM_005251113 /// XM_005251118 /// XM_006716700 /// XM_006716701 /// XM_006716702 /// XM_006716703 /// XM_006716704 /// XM_006716705 /// XM_006716706 /// XM_006716707 </td> <td> 0006928 // cellular component movement // non-traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0030035 // microspike assembly // non-traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0061333 // renal tubule morphogenesis // inferred from sequence or structural similarity /// 0071498 // cellular response to fluid shear stress // inferred from sequence or structural similarity /// 0072102 // glomerulus morphogenesis // inferred from sequence or structural similarity /// 0072160 // nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity /// 2001013 // epithelial cell proliferation involved in renal tubule morphogenesis // inferred from sequence or structural similarity </td> <td> 0001726 // ruffle // non-traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030139 // endocytic vesicle // traceable author statement </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -72.70 </td> <td> 290.35 </td> <td> -2.40 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 212243_at </td> <td> 212243_at </td> <td> BE645501 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE645501 /FEA=EST /DB_XREF=gi:9969812 /DB_XREF=est:7e71d06.x1 /CLONE=IMAGE:3287915 /UG=Hs.6283 DKFZP586F1918 protein </td> <td> BE645501 </td> <td> GRINL1A complex locus 1 /// polymerase (RNA) II (DNA directed) polypeptide M </td> <td> GCOM1 /// POLR2M </td> <td> 81488 /// 145781 </td> <td> NM_001018090 /// NM_001018091 /// NM_001018095 /// NM_001018096 /// NM_001018099 /// NM_001018102 /// NM_001285900 /// NM_015532 /// NR_027390 /// NR_104367 /// NR_104368 /// NR_104369 /// NR_104370 /// NR_104371 </td> <td> 0032774 // RNA biosynthetic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from sequence or structural similarity /// 0051685 // maintenance of ER location // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from sequence or structural similarity /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from sequence or structural similarity /// 0031674 // I band // inferred from electronic annotation /// 0031674 // I band // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -37.40 </td> <td> 136.75 </td> <td> -2.40 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 220890_s_at </td> <td> 220890_s_at </td> <td> NM_016355 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016355.1 /DEF=Homo sapiens hqp0256 protein (LOC51202), mRNA. /FEA=mRNA /GEN=LOC51202 /PROD=hqp0256 protein /DB_XREF=gi:10047107 /UG=Hs.284288 hqp0256 protein /FL=gb:NM_016355.1 gb:AF078843.1 </td> <td> NM_016355 </td> <td> apolipoprotein L domain containing 1 /// DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 </td> <td> APOLD1 /// DDX47 </td> <td> 51202 /// 81575 </td> <td> NM_001130415 /// NM_016355 /// NM_030817 /// NM_201224 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from mutant phenotype /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 0016070 // RNA metabolic process // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042118 // endothelial cell activation // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0045601 // regulation of endothelial cell differentiation // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // non-traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 76.20 </td> <td> 496.95 </td> <td> 2.40 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 222212_s_at </td> <td> 222212_s_at </td> <td> AK001105 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001105.1 /DEF=Homo sapiens cDNA FLJ10243 fis, clone HEMBB1000631, weakly similar to LONGEVITY-ASSURANCE PROTEIN 1.  /FEA=mRNA /DB_XREF=gi:7022160 /UG=Hs.285976 tumor metastasis-suppressor </td> <td> AK001105 </td> <td> ceramide synthase 2 </td> <td> CERS2 </td> <td> 29956 </td> <td> NM_013384 /// NM_022075 /// NM_181746 /// XM_005245107 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from electronic annotation </td> <td> 58.70 </td> <td> 282.55 </td> <td> 2.40 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 210927_x_at </td> <td> 210927_x_at </td> <td> BC004239 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004239.1 /DEF=Homo sapiens, jumping translocation breakpoint, clone MGC:10274, mRNA, complete cds.  /FEA=mRNA /PROD=jumping translocation breakpoint /DB_XREF=gi:13278986 /UG=Hs.323093 Homo sapiens, jumping translocation breakpoint, clone MGC:10274, mRNA, complete cds /FL=gb:BC004239.1 </td> <td> BC004239 </td> <td> jumping translocation breakpoint </td> <td> JTB </td> <td> 10899 </td> <td> NM_006694 </td> <td> 0000910 // cytokinesis // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from mutant phenotype /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay </td> <td> 0019901 // protein kinase binding // inferred from direct assay </td> <td> 87.30 </td> <td> 885.10 </td> <td> 2.40 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 221732_at </td> <td> 221732_at </td> <td> AK026161 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026161.1 /DEF=Homo sapiens cDNA: FLJ22508 fis, clone HRC11772. /FEA=mRNA /DB_XREF=gi:10438922 /UG=Hs.8859 Homo sapiens, Similar to RIKEN cDNA 5830420C20 gene, clone IMAGE:3633379, mRNA, partial cds </td> <td> AK026161 </td> <td> calcium activated nucleotidase 1 </td> <td> CANT1 </td> <td> 124583 </td> <td> NM_001159772 /// NM_001159773 /// NM_138793 /// XM_005257020 /// XM_005257021 /// XM_005257022 /// XM_006721682 /// XM_006721683 /// XR_243633 </td> <td> 0007165 // signal transduction // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0030166 // proteoglycan biosynthetic process // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016462 // pyrophosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017110 // nucleoside-diphosphatase activity // inferred from electronic annotation /// 0045134 // uridine-diphosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 72.27 </td> <td> 141.26 </td> <td> 2.40 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201593_s_at </td> <td> 201593_s_at </td> <td> AV716798 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV716798 /FEA=EST /DB_XREF=gi:10813950 /DB_XREF=est:AV716798 /CLONE=DCBAKB02 /UG=Hs.6375 uncharacterized hypothalamus protein HT010 /FL=gb:AF220184.1 gb:NM_018471.1 </td> <td> AV716798 </td> <td> zinc finger CCCH-type containing 15 </td> <td> ZC3H15 </td> <td> 55854 </td> <td> NM_018471 </td> <td> 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -58.68 </td> <td> 405.64 </td> <td> -2.40 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 218585_s_at </td> <td> 218585_s_at </td> <td> NM_016448 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016448.1 /DEF=Homo sapiens L2DTL protein (L2DTL), mRNA. /FEA=mRNA /GEN=L2DTL /PROD=L2DTL protein /DB_XREF=gi:7705575 /UG=Hs.126774 L2DTL protein /FL=gb:AF195765.1 gb:NM_016448.1 </td> <td> NM_016448 </td> <td> denticleless E3 ubiquitin protein ligase homolog (Drosophila) </td> <td> DTL </td> <td> 51514 </td> <td> NM_001286229 /// NM_001286230 /// NM_016448 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0000209 // protein polyubiquitination // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0009411 // response to UV // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019985 // translesion synthesis // inferred from direct assay /// 0031572 // G2 DNA damage checkpoint // inferred from mutant phenotype /// 0051726 // regulation of cell cycle // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031464 // Cul4A-RING E3 ubiquitin ligase complex // inferred from direct assay /// 0031465 // Cul4B-RING E3 ubiquitin ligase complex // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 37.23 </td> <td> 80.04 </td> <td> 2.40 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202882_x_at </td> <td> 202882_x_at </td> <td> NM_016167 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016167.2 /DEF=Homo sapiens retinoic acid repressible protein (RARG-1), mRNA. /FEA=mRNA /GEN=RARG-1 /PROD=retinoic acid repressible protein /DB_XREF=gi:13569842 /UG=Hs.106346 retinoic acid repressible protein /FL=gb:AF172066.2 gb:NM_016167.2 </td> <td> NM_016167 </td> <td> nucleolar protein 7, 27kDa </td> <td> NOL7 </td> <td> 51406 </td> <td> NM_016167 /// XM_005249173 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -43.88 </td> <td> 378.54 </td> <td> -2.39 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201932_at </td> <td> 201932_at </td> <td> NM_006369 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006369.1 /DEF=Homo sapiens MUF1 protein (MUF1), mRNA. /FEA=mRNA /GEN=MUF1 /PROD=MUF1 protein /DB_XREF=gi:5453747 /UG=Hs.172210 MUF1 protein /FL=gb:BC004953.1 gb:NM_006369.1 </td> <td> NM_006369 </td> <td> leucine rich repeat containing 41 </td> <td> LRRC41 </td> <td> 10489 </td> <td> NM_006369 /// XM_005270376 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from direct assay </td> <td>  </td> <td> 27.52 </td> <td> 131.36 </td> <td> 2.39 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 207157_s_at </td> <td> 207157_s_at </td> <td> NM_005274 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005274.1 /DEF=Homo sapiens guanine nucleotide binding protein (G protein), gamma 5 (GNG5), mRNA.  /FEA=mRNA /GEN=GNG5 /PROD=guanine nucleotide binding protein (G protein),gamma 5 /DB_XREF=gi:4885286 /UG=Hs.5322 guanine nucleotide binding protein (G protein), gamma 5 /FL=gb:NM_005274.1 </td> <td> NM_005274 </td> <td> guanine nucleotide binding protein (G protein), gamma 5 </td> <td> GNG5 </td> <td> 2787 </td> <td> NM_005274 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0006184 // GTP catabolic process // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement </td> <td> 0005834 // heterotrimeric G-protein complex // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003924 // GTPase activity // non-traceable author statement /// 0004871 // signal transducer activity // non-traceable author statement /// 0030165 // PDZ domain binding // inferred from direct assay </td> <td> 176.40 </td> <td> 926.73 </td> <td> 2.39 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202136_at </td> <td> 202136_at </td> <td> BE250417 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE250417 /FEA=EST /DB_XREF=gi:9120528 /DB_XREF=est:600943460T1 /CLONE=IMAGE:2959935 /UG=Hs.301449 adenovirus 5 E1A binding protein /FL=gb:NM_006624.1 </td> <td> BE250417 </td> <td> zinc finger, MYND-type containing 11 </td> <td> ZMYND11 </td> <td> 10771 </td> <td> NM_001202464 /// NM_001202465 /// NM_001202466 /// NM_001202467 /// NM_001202468 /// NM_006624 /// NM_212479 /// XM_005252359 /// XM_005252360 /// XM_005252361 /// XM_005252362 /// XM_005252363 /// XM_006717376 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0034243 // regulation of transcription elongation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from mutant phenotype /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0035064 // methylated histone binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -101.17 </td> <td> 459.24 </td> <td> -2.39 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208834_x_at </td> <td> 208834_x_at </td> <td> BC001865 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001865.1 /DEF=Homo sapiens, Similar to cadherin 1, type 1, E-cadherin (epithelial), clone MGC:1151, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to cadherin 1, type 1, E-cadherin(epithelial) /DB_XREF=gi:12804838 /UG=Hs.194657 cadherin 1, type 1, E-cadherin (epithelial) /FL=gb:BC001865.1 </td> <td> BC001865 </td> <td> ribosomal protein L23a /// small nucleolar RNA, C/D box 42A </td> <td> RPL23A /// SNORD42A </td> <td> 6147 /// 26809 </td> <td> NM_000984 /// NR_000014 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031932 // TORC2 complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1215.20 </td> <td> 5435.57 </td> <td> -2.39 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 212658_at </td> <td> 212658_at </td> <td> N66633 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N66633 /FEA=EST /DB_XREF=gi:1218758 /DB_XREF=est:yy70f02.s1 /CLONE=IMAGE:278907 /UG=Hs.79299 lipoma HMGIC fusion partner-like 2 </td> <td> N66633 </td> <td> lipoma HMGIC fusion partner-like 2 </td> <td> LHFPL2 </td> <td> 10184 </td> <td> NM_005779 /// XM_006714515 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -49.73 </td> <td> 164.99 </td> <td> -2.39 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 217827_s_at </td> <td> 217827_s_at </td> <td> NM_016630 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016630.2 /DEF=Homo sapiens acid cluster protein 33 (ACP33), mRNA. /FEA=mRNA /GEN=ACP33 /PROD=acid cluster protein 33 /DB_XREF=gi:13699804 /UG=Hs.71475 acid cluster protein 33 /FL=gb:BC000244.1 gb:NM_016630.2 gb:AF208861.1 </td> <td> NM_016630 </td> <td> spastic paraplegia 21 (autosomal recessive, Mast syndrome) </td> <td> SPG21 </td> <td> 51324 </td> <td> NM_001127889 /// NM_001127890 /// NM_016630 /// XM_005254436 /// XM_005254437 /// XM_006720564 </td> <td> 0008219 // cell death // inferred from electronic annotation /// 0050851 // antigen receptor-mediated signaling pathway // inferred by curator </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030140 // trans-Golgi network transport vesicle // inferred from direct assay </td> <td> 0042609 // CD4 receptor binding // inferred from physical interaction </td> <td> -63.02 </td> <td> 457.91 </td> <td> -2.38 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 203213_at </td> <td> 203213_at </td> <td> AL524035 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL524035 /FEA=EST /DB_XREF=gi:12787528 /DB_XREF=est:AL524035 /CLONE=CS0DC003YN06 (3 prime) /UG=Hs.184572 cell division cycle 2, G1 to S and G2 to M /FL=gb:NM_001786.1 </td> <td> AL524035 </td> <td> cyclin-dependent kinase 1 </td> <td> CDK1 </td> <td> 983 </td> <td> NM_001130829 /// NM_001170406 /// NM_001170407 /// NM_001786 /// NM_033379 /// XM_005270303 /// XM_006718082 /// XM_006718083 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000226 // microtubule cytoskeleton organization // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0007095 // mitotic G2 DNA damage checkpoint // inferred from electronic annotation /// 0007098 // centrosome cycle // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007344 // pronuclear fusion // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007569 // cell aging // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0014038 // regulation of Schwann cell differentiation // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014075 // response to amine // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0016572 // histone phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0030261 // chromosome condensation // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0034501 // protein localization to kinetochore // inferred from direct assay /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0045995 // regulation of embryonic development // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048678 // response to axon injury // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030332 // cyclin binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from electronic annotation /// 0035173 // histone kinase activity // inferred from electronic annotation </td> <td> 54.05 </td> <td> 208.90 </td> <td> 2.38 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 218238_at </td> <td> 218238_at </td> <td> NM_012341 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012341.1 /DEF=Homo sapiens GTP-binding protein (NGB), mRNA. /FEA=mRNA /GEN=NGB /PROD=GTP-binding protein /DB_XREF=gi:6912531 /UG=Hs.215766 GTP-binding protein /FL=gb:AF325353.1 gb:AF120334.1 gb:NM_012341.1 </td> <td> NM_012341 </td> <td> GTP binding protein 4 </td> <td> GTPBP4 </td> <td> 23560 </td> <td> NM_012341 /// XM_006717437 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0015684 // ferrous iron transport // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0033342 // negative regulation of collagen binding // inferred from mutant phenotype /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0015093 // ferrous iron transmembrane transporter activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 59.77 </td> <td> 242.04 </td> <td> 2.38 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202162_s_at </td> <td> 202162_s_at </td> <td> AI769416 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI769416 /FEA=EST /DB_XREF=gi:5235925 /DB_XREF=est:wj13f08.x1 /CLONE=IMAGE:2402727 /UG=Hs.26703 CCR4-NOT transcription complex, subunit 8 /FL=gb:AF053318.1 gb:NM_004779.1 gb:AL122045.1 gb:AF180476.1 </td> <td> AI769416 </td> <td> CCR4-NOT transcription complex, subunit 8 </td> <td> CNOT8 </td> <td> 9337 </td> <td> NM_004779 /// XM_005268526 /// XM_005268527 /// XM_005268528 /// XM_006714807 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0035195 // gene silencing by miRNA // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090503 // RNA phosphodiester bond hydrolysis, exonucleolytic // inferred from direct assay /// 0090503 // RNA phosphodiester bond hydrolysis, exonucleolytic // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030014 // CCR4-NOT complex // inferred from direct assay </td> <td> 0000175 // 3'-5'-exoribonuclease activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004535 // poly(A)-specific ribonuclease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -45.28 </td> <td> 124.46 </td> <td> -2.38 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 204769_s_at </td> <td> 204769_s_at </td> <td> M74447 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M74447.1 /DEF=Human PSF-2 mRNA, complete cds. /FEA=mRNA /GEN=PSF-2 /DB_XREF=gi:188505 /UG=Hs.502 ATP-binding cassette, sub-family B (MDRTAP), member 3 /FL=gb:BC002751.1 gb:M74447.1 gb:Z22935.1 gb:Z22936.1 gb:NM_000544.2 </td> <td> M74447 </td> <td> transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) </td> <td> TAP2 </td> <td> 6891 </td> <td> NM_000544 /// NM_001290043 /// NM_018833 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity //  /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002481 // antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent // not recorded /// 0002485 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent // not recorded /// 0002489 // antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent // inferred from mutant phenotype /// 0002591 // positive regulation of antigen processing and presentation of peptide antigen via MHC class I // not recorded /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0015833 // peptide transport // inferred from electronic annotation /// 0015833 // peptide transport // traceable author statement /// 0015833 // peptide transport //  /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019060 // intracellular transport of viral protein in host cell // inferred from mutant phenotype /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from direct assay /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from mutant phenotype /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0046967 // cytosol to ER transport // inferred from mutant phenotype /// 0046968 // peptide antigen transport // inferred from direct assay /// 0046968 // peptide antigen transport // inferred from mutant phenotype /// 0055085 // transmembrane transport // not recorded </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane //  /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from direct assay /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay /// 0042825 // TAP complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0015197 // peptide transporter activity // inferred from genetic interaction /// 0015421 // oligopeptide-transporting ATPase activity //  /// 0015433 // peptide antigen-transporting ATPase activity // inferred from mutant phenotype /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0023029 // MHC class Ib protein binding // inferred from physical interaction /// 0042288 // MHC class I protein binding //  /// 0042605 // peptide antigen binding //  /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046979 // TAP2 binding //  /// 0046980 // tapasin binding // inferred from sequence or structural similarity </td> <td> -24.27 </td> <td> 65.91 </td> <td> -2.38 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 216570_x_at </td> <td> 216570_x_at </td> <td> AL096829 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL096829 /DEF=Human DNA sequence from clone RP4-595K12 on chromosome 1p31.2-31.3 Contains a pseudogene similar to 60S RPL29 (ribosomal protein L29 (cell surface heparin binding protein HIP)), a chromosome 1 specific mRNA (KIAA0499), a novel mRNA (KIAA0433), EST... /FEA=CDS /DB_XREF=gi:6634461 /UG=Hs.302120 Human DNA sequence from clone RP4-595K12 on chromosome 1p31.2-31.3 Contains a pseudogene similar to 60S RPL29 (ribosomal protein L29 (cell surface heparin binding protein HIP)), a chromosome 1 specific mRNA (KIAA0499), a novel mRNA (KIAA0433), ESTs, STSs, </td> <td> AL096829 </td> <td>  </td> <td> RP4-595K12.1 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -36.27 </td> <td> 403.71 </td> <td> -2.37 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 209063_x_at </td> <td> 209063_x_at </td> <td> BF248165 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF248165 /FEA=EST /DB_XREF=gi:11164389 /DB_XREF=est:601859364F1 /CLONE=IMAGE:4069886 /UG=Hs.109643 polyadenylate binding protein-interacting protein 1 /FL=gb:AL136920.1 </td> <td> BF248165 </td> <td> poly(A) binding protein interacting protein 1 </td> <td> PAIP1 </td> <td> 10605 </td> <td> NM_006451 /// NM_182789 /// NM_183323 /// XM_005248230 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from direct assay /// 0048255 // mRNA stabilization // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from direct assay </td> <td> -48.90 </td> <td> 314.45 </td> <td> -2.37 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 216397_s_at </td> <td> 216397_s_at </td> <td> AK024840 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024840.1 /DEF=Homo sapiens cDNA: FLJ21187 fis, clone CAS11730. /FEA=mRNA /DB_XREF=gi:10437246 /UG=Hs.30736 KIAA0124 protein </td> <td> AK024840 </td> <td> block of proliferation 1 /// microRNA 7112 </td> <td> BOP1 /// MIR7112 </td> <td> 23246 /// 102465906 </td> <td> NM_015201 /// NR_107057 </td> <td> 0000463 // maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from mutant phenotype /// 0000466 // maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0042254 // ribosome biogenesis // inferred by curator /// 0042254 // ribosome biogenesis // non-traceable author statement /// 0042273 // ribosomal large subunit biogenesis // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030687 // preribosome, large subunit precursor // inferred from electronic annotation /// 0070545 // PeBoW complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0043021 // ribonucleoprotein complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 26.85 </td> <td> 74.62 </td> <td> 2.37 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201004_at </td> <td> 201004_at </td> <td> NM_006280 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006280.1 /DEF=Homo sapiens signal sequence receptor, delta (translocon-associated protein delta) (SSR4), mRNA.  /FEA=mRNA /GEN=SSR4 /PROD=signal sequence receptor, delta /DB_XREF=gi:5454089 /UG=Hs.102135 signal sequence receptor, delta (translocon-associated protein delta) /FL=gb:BC003371.1 gb:NM_006280.1 </td> <td> NM_006280 </td> <td> signal sequence receptor, delta </td> <td> SSR4 </td> <td> 6748 </td> <td> NM_001204526 /// NM_001204527 /// NM_006280 /// NR_037927 </td> <td> 0006412 // translation // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006886 // intracellular protein transport // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005784 // Sec61 translocon complex // non-traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // non-traceable author statement </td> <td> -127.90 </td> <td> 672.10 </td> <td> -2.37 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 210845_s_at </td> <td> 210845_s_at </td> <td> U08839 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U08839.1 /DEF=Human urokinase-type plasminogen activator receptor mRNA, complete cds.  /FEA=mRNA /PROD=urokinase-type plasminogen activator receptor /DB_XREF=gi:517197 /UG=Hs.179657 plasminogen activator, urokinase receptor /FL=gb:U08839.1 </td> <td> U08839 </td> <td> plasminogen activator, urokinase receptor </td> <td> PLAUR </td> <td> 5329 </td> <td> NM_001005376 /// NM_001005377 /// NM_002659 /// XM_005258988 /// XM_005258989 /// XM_005258990 /// XM_006723241 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006501 // C-terminal protein lipidation // traceable author statement /// 0006928 // cellular component movement // non-traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016255 // attachment of GPI anchor to protein // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030162 // regulation of proteolysis // non-traceable author statement /// 0038195 // urokinase plasminogen activator signaling pathway // non-traceable author statement /// 0042730 // fibrinolysis // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0019898 // extrinsic component of membrane // traceable author statement /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0004872 // receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0030377 // urokinase plasminogen activator receptor activity // non-traceable author statement </td> <td> 60.00 </td> <td> 330.85 </td> <td> 2.37 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201358_s_at </td> <td> 201358_s_at </td> <td> NM_016451 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016451.1 /DEF=Homo sapiens coatomer protein complex, subunit beta (COPB), mRNA. /FEA=mRNA /GEN=COPB /PROD=coatomer protein complex, subunit beta /DB_XREF=gi:7705368 /UG=Hs.3059 coatomer protein complex, subunit beta /FL=gb:AF084457.1 gb:AL136593.1 gb:NM_016451.1 </td> <td> NM_016451 </td> <td> coatomer protein complex, subunit beta 1 </td> <td> COPB1 </td> <td> 1315 </td> <td> NM_001144061 /// NM_001144062 /// NM_016451 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005798 // Golgi-associated vesicle // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030137 // COPI-coated vesicle // inferred from electronic annotation /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 75.90 </td> <td> 885.40 </td> <td> 2.37 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 213583_x_at </td> <td> 213583_x_at </td> <td> BE964125 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE964125 /FEA=EST /DB_XREF=gi:11767593 /DB_XREF=est:601657809R1 /CLONE=IMAGE:3875978 /UG=Hs.288036 tRNA isopentenylpyrophosphate transferase </td> <td> BE964125 </td> <td> eukaryotic translation elongation factor 1 alpha 1 </td> <td> EEF1A1 </td> <td> 1915 </td> <td> NM_001402 /// NM_001403 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005853 // eukaryotic translation elongation factor 1 complex // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0019901 // protein kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -544.10 </td> <td> 3660.02 </td> <td> -2.36 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 214543_x_at </td> <td> 214543_x_at </td> <td> AF142421 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF142421.1 /DEF=Homo sapiens QUAKING isoform 5 (QUAKING) mRNA, complete cds. /FEA=CDS /GEN=QUAKING /PROD=QUAKING isoform 5 /DB_XREF=gi:7542354 /UG=Hs.15020 homolog of mouse quaking QKI (KH domain RNA binding protein) /FL=gb:AF142420.1 gb:AF142421.1 </td> <td> AF142421 </td> <td> QKI, KH domain containing, RNA binding </td> <td> QKI </td> <td> 9444 </td> <td> NM_006775 /// NM_206853 /// NM_206854 /// NM_206855 /// XM_005267224 /// XR_245557 /// XR_427977 /// XR_427978 </td> <td> 0001570 // vasculogenesis // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation /// 0008366 // axon ensheathment // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0042759 // long-chain fatty acid biosynthetic process // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -61.18 </td> <td> 224.04 </td> <td> -2.36 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 204338_s_at </td> <td> 204338_s_at </td> <td> NM_005613 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005613.2 /DEF=Homo sapiens regulator of G-protein signalling 4 (RGS4), mRNA. /FEA=mRNA /GEN=RGS4 /PROD=regulator of G-protein signaling 4 /DB_XREF=gi:11184227 /UG=Hs.227571 regulator of G-protein signalling 4 /FL=gb:NM_005613.2 gb:BC000737.1 </td> <td> NM_005613 </td> <td> regulator of G-protein signaling 4 </td> <td> RGS4 </td> <td> 5999 </td> <td> NM_001102445 /// NM_001113380 /// NM_001113381 /// NM_005613 </td> <td> 0000188 // inactivation of MAPK activity // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // not recorded /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // not recorded /// 0005516 // calmodulin binding // traceable author statement </td> <td> 35.82 </td> <td> 64.24 </td> <td> 2.36 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 219261_at </td> <td> 219261_at </td> <td> NM_024067 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024067.1 /DEF=Homo sapiens hypothetical protein MGC2718 (MGC2718), mRNA. /FEA=mRNA /GEN=MGC2718 /PROD=hypothetical protein MGC2718 /DB_XREF=gi:13129045 /UG=Hs.81057 hypothetical protein MGC2718 /FL=gb:BC001076.1 gb:NM_024067.1 gb:BC005121.1 </td> <td> NM_024067 </td> <td> chromosome 7 open reading frame 26 </td> <td> C7orf26 </td> <td> 79034 </td> <td> NM_024067 /// XM_005249845 /// XR_242101 </td> <td>  </td> <td>  </td> <td>  </td> <td> 35.78 </td> <td> 51.14 </td> <td> 2.36 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 211941_s_at </td> <td> 211941_s_at </td> <td> BE969671 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE969671 /FEA=EST /DB_XREF=gi:10582604 /DB_XREF=est:601679610F1 /CLONE=IMAGE:3949779 /UG=Hs.80423 prostatic binding protein </td> <td> BE969671 </td> <td> phosphatidylethanolamine binding protein 1 </td> <td> PEBP1 </td> <td> 5037 </td> <td> NM_002567 </td> <td> 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0008429 // phosphatidylethanolamine binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 107.58 </td> <td> 633.16 </td> <td> 2.36 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 217853_at </td> <td> 217853_at </td> <td> NM_022748 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022748.1 /DEF=Homo sapiens hypothetical protein FLJ13732 similar to tensin (FLJ13732), mRNA.  /FEA=mRNA /GEN=FLJ13732 /PROD=hypothetical protein FLJ13732 similar to tensin /DB_XREF=gi:12232408 /UG=Hs.12210 hypothetical protein FLJ13732 similar to tensin /FL=gb:NM_022748.1 </td> <td> NM_022748 </td> <td> tensin 3 </td> <td> TNS3 </td> <td> 64759 </td> <td> NM_022748 </td> <td> 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048286 // lung alveolus development // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 36.40 </td> <td> 103.85 </td> <td> 2.36 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 216396_s_at </td> <td> 216396_s_at </td> <td> AF131850 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF131850.1 /DEF=Homo sapiens clone 24988 mRNA sequence. /FEA=mRNA /DB_XREF=gi:4406694 /UG=Hs.286027 etoposide-induced mRNA </td> <td> AF131850 </td> <td> etoposide induced 2.4 </td> <td> EI24 </td> <td> 9538 </td> <td> NM_001007277 /// NM_001290135 /// NM_004879 /// NR_110769 /// NR_110770 </td> <td> 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td>  </td> <td> 85.12 </td> <td> 493.61 </td> <td> 2.35 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 218775_s_at </td> <td> 218775_s_at </td> <td> NM_024949 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024949.1 /DEF=Homo sapiens hypothetical protein FLJ22029 (FLJ22029), mRNA. /FEA=mRNA /GEN=FLJ22029 /PROD=hypothetical protein FLJ22029 /DB_XREF=gi:13376432 /UG=Hs.285243 hypothetical protein FLJ22029 /FL=gb:NM_024949.1 </td> <td> NM_024949 </td> <td> claudin 22 /// WW and C2 domain containing 2 </td> <td> CLDN22 /// WWC2 </td> <td> 53842 /// 80014 </td> <td> NM_001111319 /// NM_024949 /// XM_006714312 /// XM_006714313 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0035331 // negative regulation of hippo signaling // inferred from direct assay /// 0045216 // cell-cell junction organization // traceable author statement /// 0046621 // negative regulation of organ growth // inferred from mutant phenotype /// 0070830 // tight junction assembly // traceable author statement </td> <td> 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0032947 // protein complex scaffold // inferred from direct assay /// 0042802 // identical protein binding // inferred from sequence or structural similarity </td> <td> -33.08 </td> <td> 52.16 </td> <td> -2.35 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 217917_s_at </td> <td> 217917_s_at </td> <td> NM_014183 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014183.1 /DEF=Homo sapiens HSPC162 protein (HSPC162), mRNA. /FEA=mRNA /GEN=HSPC162 /PROD=HSPC162 protein /DB_XREF=gi:7661821 /UG=Hs.100002 HSPC162 protein /FL=gb:BC002481.1 gb:AY026513.1 gb:AF161511.1 gb:NM_014183.1 gb:AF165516.1 </td> <td> NM_014183 </td> <td> dynein, light chain, roadblock-type 1 </td> <td> DYNLRB1 </td> <td> 83658 </td> <td> NM_001281727 /// NM_001281728 /// NM_001281729 /// NM_014183 /// NM_177953 /// NR_104032 /// XM_005260568 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // non-traceable author statement /// 0007632 // visual behavior // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from sequence or structural similarity /// 0005868 // cytoplasmic dynein complex // non-traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030286 // dynein complex // inferred from electronic annotation </td> <td> 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> -85.02 </td> <td> 530.46 </td> <td> -2.35 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 206298_at </td> <td> 206298_at </td> <td> NM_021226 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021226.1 /DEF=Homo sapiens hypothetical protein from clones 23549 and 23762 (LOC58504), mRNA.  /FEA=mRNA /GEN=LOC58504 /PROD=hypothetical protein from clones 23549 and23762 /DB_XREF=gi:10864038 /UG=Hs.87241 hypothetical protein from clones 23549 and 23762 /FL=gb:NM_021226.1 gb:U90908.1 </td> <td> NM_021226 </td> <td> Rho GTPase activating protein 22 </td> <td> ARHGAP22 </td> <td> 58504 </td> <td> NM_001256024 /// NM_001256025 /// NM_001256026 /// NM_001256027 /// NM_021226 /// NR_045675 /// XM_005270014 /// XM_006717934 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> -32.25 </td> <td> 99.08 </td> <td> -2.35 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201066_at </td> <td> 201066_at </td> <td> NM_001916 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001916.1 /DEF=Homo sapiens cytochrome c-1 (CYC1), mRNA. /FEA=mRNA /GEN=CYC1 /PROD=cytochrome c-1 /DB_XREF=gi:4503184 /UG=Hs.289271 cytochrome c-1 /FL=gb:BC001006.1 gb:NM_001916.1 </td> <td> NM_001916 </td> <td> cytochrome c-1 </td> <td> CYC1 </td> <td> 1537 </td> <td> NM_001916 </td> <td> 0022904 // respiratory electron transport chain // traceable author statement /// 0033762 // response to glucagon // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0045155 // electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 46.30 </td> <td> 244.18 </td> <td> 2.35 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 212869_x_at </td> <td> 212869_x_at </td> <td> AI721229 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI721229 /FEA=EST /DB_XREF=gi:5038485 /DB_XREF=est:as68c10.x1 /CLONE=IMAGE:2333874 /UG=Hs.326456 hypothetical protein FLJ20030 </td> <td> AI721229 </td> <td> uncharacterized LOC101928826 /// tumor protein, translationally-controlled 1 </td> <td> LOC101928826 /// TPT1 </td> <td> 7178 /// 101928826 </td> <td> NM_001286272 /// NM_001286273 /// NM_003295 /// XR_242670 /// XR_250536 /// XR_252641 </td> <td> 0006816 // calcium ion transport // inferred by curator /// 0006874 // cellular calcium ion homeostasis // inferred by curator /// 0009615 // response to virus // inferred from expression pattern /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 1902230 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage // inferred from mutant phenotype /// 2000384 // negative regulation of ectoderm development // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005771 // multivesicular body // inferred from direct assay /// 0045298 // tubulin complex // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1525.05 </td> <td> 5627.60 </td> <td> -2.34 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 209288_s_at </td> <td> 209288_s_at </td> <td> AL136842 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136842.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434A0530 (from clone DKFZp434A0530); complete cds.  /FEA=mRNA /GEN=DKFZp434A0530 /PROD=hypothetical protein /DB_XREF=gi:6807668 /UG=Hs.260024 Cdc42 effector protein 3 /FL=gb:AF094521.1 gb:AF104857.1 gb:NM_006449.1 gb:AF164118.1 gb:AL136842.1 </td> <td> AL136842 </td> <td> CDC42 effector protein (Rho GTPase binding) 3 </td> <td> CDC42EP3 </td> <td> 10602 </td> <td> NM_001270436 /// NM_001270437 /// NM_001270438 /// NM_006449 </td> <td> 0007165 // signal transduction // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0005519 // cytoskeletal regulatory protein binding // traceable author statement </td> <td> 47.95 </td> <td> 216.00 </td> <td> 2.34 </td> <td> 0.05 </td> <td> 0.08 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208966_x_at </td> <td> 208966_x_at </td> <td> AF208043 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF208043.1 /DEF=Homo sapiens IFI16b (IFI16b) mRNA, complete cds. /FEA=mRNA /GEN=IFI16b /PROD=IFI16b /DB_XREF=gi:6644296 /UG=Hs.155530 interferon, gamma-inducible protein 16 /FL=gb:AF208043.1 </td> <td> AF208043 </td> <td> interferon, gamma-inducible protein 16 </td> <td> IFI16 </td> <td> 3428 </td> <td> NM_001206567 /// NM_005531 /// XM_005245127 /// XM_006711290 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001819 // positive regulation of cytokine production // traceable author statement /// 0002218 // activation of innate immune response // inferred from direct assay /// 0002376 // immune system process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0009615 // response to virus // non-traceable author statement /// 0010506 // regulation of autophagy // inferred from expression pattern /// 0030097 // hemopoiesis // non-traceable author statement /// 0030099 // myeloid cell differentiation // non-traceable author statement /// 0030224 // monocyte differentiation // inferred from direct assay /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032731 // positive regulation of interleukin-1 beta production // inferred from direct assay /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from direct assay /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045824 // negative regulation of innate immune response // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from mutant phenotype /// 0071479 // cellular response to ionizing radiation // inferred from direct assay /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from mutant phenotype /// 0097202 // activation of cysteine-type endopeptidase activity // inferred from mutant phenotype /// 2000117 // negative regulation of cysteine-type endopeptidase activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -133.55 </td> <td> 492.82 </td> <td> -2.34 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202399_s_at </td> <td> 202399_s_at </td> <td> NM_005829 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005829.1 /DEF=Homo sapiens adaptor-related protein complex 3, sigma 2 subunit (AP3S2), mRNA.  /FEA=mRNA /GEN=AP3S2 /PROD=adaptor-related protein complex 3, sigma 2subunit /DB_XREF=gi:5031580 /UG=Hs.154782 adaptor-related protein complex 3, sigma 2 subunit /FL=gb:BC002785.1 gb:NM_005829.1 </td> <td> NM_005829 </td> <td> adaptor-related protein complex 3, sigma 2 subunit /// C15orf38-AP3S2 readthrough </td> <td> AP3S2 /// C15orf38-AP3S2 </td> <td> 10239 /// 100526783 </td> <td> NM_001199058 /// NM_005829 /// NR_023361 /// NR_037582 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0008089 // anterograde axon cargo transport // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0033058 // directional locomotion // inferred from mutant phenotype /// 0048490 // anterograde synaptic vesicle transport // inferred from sequence or structural similarity /// 0051126 // negative regulation of actin nucleation // inferred from direct assay /// 2000393 // negative regulation of lamellipodium morphogenesis // inferred from mutant phenotype </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030117 // membrane coat // inferred from electronic annotation /// 0030123 // AP-3 adaptor complex // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> -29.67 </td> <td> 173.64 </td> <td> -2.34 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200793_s_at </td> <td> 200793_s_at </td> <td> NM_001098 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001098.1 /DEF=Homo sapiens aconitase 2, mitochondrial (ACO2), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=ACO2 /PROD=aconitase 2 /DB_XREF=gi:4501866 /UG=Hs.300463 aconitase 2, mitochondrial /FL=gb:U80040.1 gb:NM_001098.1 </td> <td> NM_001098 </td> <td> aconitase 2, mitochondrial </td> <td> ACO2 </td> <td> 50 </td> <td> NM_001098 </td> <td> 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006099 // tricarboxylic acid cycle // inferred from direct assay /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006101 // citrate metabolic process // inferred from direct assay /// 0006102 // isocitrate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0003994 // aconitate hydratase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051538 // 3 iron, 4 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation </td> <td> -53.75 </td> <td> 200.25 </td> <td> -2.34 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 203972_s_at </td> <td> 203972_s_at </td> <td> AB035307 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB035307.1 /DEF=Homo sapiens mRNA for Pex3p, complete cds. /FEA=mRNA /GEN=PEX3 /PROD=Pex3p /DB_XREF=gi:8926848 /UG=Hs.7277 peroxisomal biogenesis factor 3 /FL=gb:NM_003630.1 gb:AB035307.1 </td> <td> AB035307 </td> <td> peroxisomal biogenesis factor 3 </td> <td> PEX3 </td> <td> 8504 </td> <td> NM_003630 </td> <td> 0007031 // peroxisome organization // inferred from mutant phenotype /// 0016557 // peroxisome membrane biogenesis // inferred from electronic annotation /// 0045046 // protein import into peroxisome membrane // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from mutant phenotype /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // traceable author statement /// 0005779 // integral component of peroxisomal membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032994 // protein-lipid complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from direct assay /// 0046983 // protein dimerization activity // inferred from direct assay </td> <td> 26.05 </td> <td> 81.67 </td> <td> 2.34 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 218104_at </td> <td> 218104_at </td> <td> NM_017746 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017746.1 /DEF=Homo sapiens hypothetical protein FLJ20287 (FLJ20287), mRNA. /FEA=mRNA /GEN=FLJ20287 /PROD=hypothetical protein FLJ20287 /DB_XREF=gi:8923268 /UG=Hs.26369 hypothetical protein FLJ20287 /FL=gb:NM_017746.1 </td> <td> NM_017746 </td> <td> testis expressed 10 </td> <td> TEX10 </td> <td> 54881 </td> <td> NM_001161584 /// NM_017746 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 24.93 </td> <td> 152.06 </td> <td> 2.34 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202511_s_at </td> <td> 202511_s_at </td> <td> AK001899 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001899.1 /DEF=Homo sapiens cDNA FLJ11037 fis, clone PLACE1004316, highly similar to H.sapiens mRNA for apoptosis specific protein.  /FEA=mRNA /DB_XREF=gi:7023451 /UG=Hs.11171 APG5 (autophagy 5, S. cerevisiae)-like /FL=gb:NM_004849.1 </td> <td> AK001899 </td> <td> autophagy related 5 </td> <td> ATG5 </td> <td> 9474 </td> <td> NM_001286106 /// NM_001286107 /// NM_001286108 /// NM_001286111 /// NM_004849 /// NR_104402 /// NR_104403 </td> <td> 0000045 // autophagic vacuole assembly // not recorded /// 0000045 // autophagic vacuole assembly // inferred from sequence or structural similarity /// 0000422 // mitochondrion degradation // not recorded /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002739 // regulation of cytokine secretion involved in immune response // inferred from electronic annotation /// 0006501 // C-terminal protein lipidation // not recorded /// 0006914 // autophagy // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009620 // response to fungus // inferred from electronic annotation /// 0030435 // sporulation resulting in formation of a cellular spore // not recorded /// 0031397 // negative regulation of protein ubiquitination // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0034727 // piecemeal microautophagy of nucleus // not recorded /// 0042311 // vasodilation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // inferred from sequence or structural similarity /// 0044805 // late nucleophagy // not recorded /// 0045087 // innate immune response // traceable author statement /// 0048840 // otolith development // inferred from electronic annotation /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0060047 // heart contraction // inferred from electronic annotation /// 1902017 // regulation of cilium assembly // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005930 // axoneme // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0034045 // pre-autophagosomal structure membrane // not recorded /// 0034045 // pre-autophagosomal structure membrane // inferred from sequence or structural similarity /// 0034274 // Atg12-Atg5-Atg16 complex // not recorded </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019776 // Atg8 ligase activity // not recorded </td> <td> -29.82 </td> <td> 215.56 </td> <td> -2.34 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 206790_s_at </td> <td> 206790_s_at </td> <td> NM_004545 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004545.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1 (7kD, MNLL) (NDUFB1), mRNA.  /FEA=mRNA /GEN=NDUFB1 /PROD=NADH dehydrogenase (ubiquinone) 1 betasubcomplex, 1 (7kD, MNLL) /DB_XREF=gi:4758775 /UG=Hs.183435 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1 (7kD, MNLL) /FL=gb:AF054181.1 gb:NM_004545.1 </td> <td> NM_004545 </td> <td> NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa </td> <td> NDUFB1 </td> <td> 4707 </td> <td> NM_004545 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0003954 // NADH dehydrogenase activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> 66.85 </td> <td> 433.15 </td> <td> 2.33 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 209136_s_at </td> <td> 209136_s_at </td> <td> BG390445 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG390445 /FEA=EST /DB_XREF=gi:13283893 /DB_XREF=est:602416083F1 /CLONE=IMAGE:4524309 /UG=Hs.78829 ubiquitin specific protease 10 /FL=gb:BC000263.1 </td> <td> BG390445 </td> <td> ubiquitin specific peptidase 10 </td> <td> USP10 </td> <td> 9100 </td> <td> NM_001272075 /// NM_005153 /// NR_073577 /// NR_073578 /// XM_006721330 /// XM_006721331 /// XM_006721332 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0010506 // regulation of autophagy // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0002039 // p53 binding // inferred from physical interaction /// 0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -50.12 </td> <td> 146.89 </td> <td> -2.33 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 212813_at </td> <td> 212813_at </td> <td> AA149644 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA149644 /FEA=EST /DB_XREF=gi:1720445 /DB_XREF=est:zl39d08.s1 /CLONE=IMAGE:504303 /UG=Hs.55016 hypothetical protein FLJ21935 </td> <td> AA149644 </td> <td> junctional adhesion molecule 3 </td> <td> JAM3 </td> <td> 83700 </td> <td> NM_001205329 /// NM_032801 </td> <td> 0001525 // angiogenesis // inferred from direct assay /// 0001780 // neutrophil homeostasis // inferred from electronic annotation /// 0002250 // adaptive immune response // inferred from electronic annotation /// 0002318 // myeloid progenitor cell differentiation // inferred from electronic annotation /// 0002523 // leukocyte migration involved in inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0042552 // myelination // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0090022 // regulation of neutrophil chemotaxis // inferred from direct assay /// 0090138 // regulation of actin cytoskeleton organization by cell-cell adhesion // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from direct assay /// 0033010 // paranodal junction // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0044291 // cell-cell contact zone // inferred from direct assay </td> <td> 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 67.90 </td> <td> 461.32 </td> <td> 2.33 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200028_s_at </td> <td> 200028_s_at </td> <td> NM_020151 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020151.1 /DEF=Homo sapiens GTT1 protein (GTT1), mRNA. /FEA=mRNA /GEN=GTT1 /PROD=GTT1 protein /DB_XREF=gi:9910251 /UG=Hs.283722 GTT1 protein /FL=gb:AF270647.1 gb:NM_020151.1 </td> <td> NM_020151 </td> <td> StAR-related lipid transfer (START) domain containing 7 </td> <td> STARD7 </td> <td> 56910 </td> <td> NM_020151 /// NM_139267 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0008289 // lipid binding // inferred from electronic annotation </td> <td> 79.28 </td> <td> 539.14 </td> <td> 2.33 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 221832_s_at </td> <td> 221832_s_at </td> <td> AV741657 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV741657 /FEA=EST /DB_XREF=gi:10859238 /DB_XREF=est:AV741657 /CLONE=CBMALG01 /UG=Hs.154085 leucine zipper protein 1 </td> <td> AV741657 </td> <td> leucine zipper protein 1 </td> <td> LUZP1 </td> <td> 7798 </td> <td> NM_001142546 /// NM_033631 </td> <td> 0003281 // ventricular septum development // inferred from electronic annotation /// 0021503 // neural fold bending // inferred from electronic annotation /// 0060840 // artery development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td>  </td> <td> 43.90 </td> <td> 93.48 </td> <td> 2.33 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 207707_s_at </td> <td> 207707_s_at </td> <td> NM_030673 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030673.1 /DEF=Homo sapiens SEC13 (S. cerevisiae)-like 1 (SEC13L1), mRNA. /FEA=mRNA /GEN=SEC13L1 /PROD=SEC13 (S. cerevisiae)-like 1 /DB_XREF=gi:13491163 /UG=Hs.227949 SEC13 (S. cerevisiae)-like 1 /FL=gb:BC002634.1 gb:NM_030673.1 </td> <td> NM_030673 </td> <td> SEC13 homolog (S. cerevisiae) </td> <td> SEC13 </td> <td> 6396 </td> <td> NM_001136026 /// NM_001136232 /// NM_001278946 /// NM_030673 /// NM_183352 /// XM_005265377 /// XM_005265378 /// XM_005265379 /// XM_006713286 /// XM_006713287 /// XM_006713288 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031080 // nuclear pore outer ring // non-traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 118.32 </td> <td> 552.51 </td> <td> 2.32 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 210878_s_at </td> <td> 210878_s_at </td> <td> BC001202 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001202.1 /DEF=Homo sapiens, clone MGC:3185, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:3185) /DB_XREF=gi:12654720 /UG=Hs.24125 putative zinc finger protein /FL=gb:BC001202.1 </td> <td> BC001202 </td> <td> lysine (K)-specific demethylase 3B </td> <td> KDM3B </td> <td> 51780 </td> <td> NM_016604 /// XM_005272018 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> 33.40 </td> <td> 169.10 </td> <td> 2.32 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 209635_at </td> <td> 209635_at </td> <td> BC003561 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003561.1 /DEF=Homo sapiens, Similar to adaptor-related protein complex 1, sigma 1 subunit, clone MGC:1929, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to adaptor-related protein complex 1,sigma 1 subunit /DB_XREF=gi:13097710 /UG=Hs.57600 adaptor-related protein complex 1, sigma 1 subunit /FL=gb:BC003561.1 </td> <td> BC003561 </td> <td> adaptor-related protein complex 1, sigma 1 subunit </td> <td> AP1S1 </td> <td> 1174 </td> <td> NM_001283 /// NM_057089 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030121 // AP-1 adaptor complex // traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // non-traceable author statement /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> 138.43 </td> <td> 180.64 </td> <td> 2.32 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 213738_s_at </td> <td> 213738_s_at </td> <td> AI587323 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI587323 /FEA=EST /DB_XREF=gi:4573764 /DB_XREF=est:tq04h04.x1 /CLONE=IMAGE:2207863 /UG=Hs.155101 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1, cardiac muscle </td> <td> AI587323 </td> <td> ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle </td> <td> ATP5A1 </td> <td> 498 </td> <td> NM_001001935 /// NM_001001937 /// NM_001257334 /// NM_001257335 /// NM_004046 </td> <td> 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006629 // lipid metabolic process // inferred from sequence or structural similarity /// 0006754 // ATP biosynthetic process // inferred by curator /// 0006754 // ATP biosynthetic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0008180 // COP9 signalosome // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator /// 0042288 // MHC class I protein binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // inferred from sequence or structural similarity /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation </td> <td> 118.15 </td> <td> 1601.70 </td> <td> 2.32 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 38710_at </td> <td> 38710_at </td> <td> AL096714 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AL096714:Homo sapiens mRNA; cDNA DKFZp564E242 (from clone DKFZp564E242) /cds=UNKNOWN /gb=AL096714 /gi=5419847 /ug=Hs.108504 /len=1904 </td> <td> AL096714 </td> <td> uncharacterized LOC101927673 /// OTU deubiquitinase, ubiquitin aldehyde binding 1 </td> <td> LOC101927673 /// OTUB1 </td> <td> 55611 /// 101927673 </td> <td> NM_017670 /// NR_003089 /// XR_247234 /// XR_247664 /// XR_252904 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0019538 // protein metabolic process // inferred from electronic annotation /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay /// 1901315 // negative regulation of histone H2A K63-linked ubiquitination // inferred from direct assay /// 2000780 // negative regulation of double-strand break repair // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008242 // omega peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019784 // NEDD8-specific protease activity // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay </td> <td> 51.80 </td> <td> 344.43 </td> <td> 2.31 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 218200_s_at </td> <td> 218200_s_at </td> <td> NM_004546 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004546.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2 (8kD, AGGG) (NDUFB2), mRNA.  /FEA=mRNA /GEN=NDUFB2 /PROD=NADH dehydrogenase (ubiquinone) 1 betasubcomplex, 2 (8kD, AGGG) /DB_XREF=gi:4758777 /UG=Hs.198272 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2 (8kD, AGGG) /FL=gb:BC001168.1 gb:AF050639.1 gb:NM_004546.1 gb:AF067166.1 </td> <td> NM_004546 </td> <td> NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa </td> <td> NDUFB2 </td> <td> 4708 </td> <td> NM_004546 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> 88.63 </td> <td> 698.84 </td> <td> 2.31 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200014_s_at </td> <td> 200014_s_at </td> <td> NM_004500 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004500.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1C2) (HNRPC), mRNA.  /FEA=mRNA /GEN=HNRPC /PROD=heterogeneous nuclear ribonucleoprotein C(C1C2) /DB_XREF=gi:4758543 /UG=Hs.182447 heterogeneous nuclear ribonucleoprotein C (C1C2) /FL=gb:BC003394.1 gb:M16342.1 gb:NM_004500.1 </td> <td> NM_004500 </td> <td> heterogeneous nuclear ribonucleoprotein C (C1/C2) </td> <td> HNRNPC </td> <td> 3183 </td> <td> NM_001077442 /// NM_001077443 /// NM_004500 /// NM_031314 /// XM_006720124 /// XM_006720125 /// XM_006720126 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0045120 // pronucleus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003729 // mRNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008266 // poly(U) RNA binding // inferred from direct assay /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -109.08 </td> <td> 604.21 </td> <td> -2.31 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 206116_s_at </td> <td> 206116_s_at </td> <td> NM_000366 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000366.1 /DEF=Homo sapiens tropomyosin 1 (alpha) (TPM1), mRNA. /FEA=mRNA /GEN=TPM1 /PROD=tropomyosin 1 (alpha) /DB_XREF=gi:4507646 /UG=Hs.77899 tropomyosin 1 (alpha) /FL=gb:M19713.1 gb:NM_000366.1 </td> <td> NM_000366 </td> <td> tropomyosin 1 (alpha) </td> <td> TPM1 </td> <td> 7168 </td> <td> NM_000366 /// NM_001018004 /// NM_001018005 /// NM_001018006 /// NM_001018007 /// NM_001018008 /// NM_001018020 /// XM_005254637 /// XM_005254638 /// XM_005254639 /// XM_005254640 /// XM_005254641 /// XM_005254643 /// XM_005254644 /// XM_005254645 /// XM_005254646 /// XM_005254647 /// XM_005254648 /// XM_005254649 /// XM_005254650 /// XM_005254651 /// XM_005254652 /// XM_005254653 /// XM_006720667 /// XM_006720668 /// XM_006720669 /// XR_429470 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0003065 // positive regulation of heart rate by epinephrine // inferred from sequence or structural similarity /// 0006413 // translational initiation // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006937 // regulation of muscle contraction // traceable author statement /// 0007010 // cytoskeleton organization // traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0030049 // muscle filament sliding // inferred from sequence or structural similarity /// 0030049 // muscle filament sliding // traceable author statement /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0031529 // ruffle organization // inferred from sequence or structural similarity /// 0032781 // positive regulation of ATPase activity // inferred from sequence or structural similarity /// 0034614 // cellular response to reactive oxygen species // inferred from expression pattern /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0045214 // sarcomere organization // inferred from mutant phenotype /// 0045785 // positive regulation of cell adhesion // inferred from sequence or structural similarity /// 0051496 // positive regulation of stress fiber assembly // inferred from sequence or structural similarity /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from mutant phenotype /// 0060048 // cardiac muscle contraction // inferred from mutant phenotype </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005862 // muscle thin filament tropomyosin // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030017 // sarcomere // traceable author statement /// 0031941 // filamentous actin // inferred from electronic annotation /// 0032059 // bleb // inferred from mutant phenotype /// 0032587 // ruffle membrane // inferred from direct assay </td> <td> 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // traceable author statement </td> <td> -80.55 </td> <td> 603.48 </td> <td> -2.31 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 209517_s_at </td> <td> 209517_s_at </td> <td> AB020982 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB020982.1 /DEF=Homo sapiens ASH2L mRNA, complete cds, similar to Drosophila ash2 sequence.  /FEA=mRNA /GEN=ASH2L /DB_XREF=gi:4417209 /UG=Hs.6856 ash2 (absent, small, or homeotic, Drosophila, homolog)-like /FL=gb:AF056718.1 gb:AB020982.1 gb:NM_004674.1 </td> <td> AB020982 </td> <td> ash2 (absent, small, or homeotic)-like (Drosophila) </td> <td> ASH2L </td> <td> 9070 </td> <td> NM_001105214 /// NM_001261832 /// NM_001282272 /// NM_004674 /// XM_005273682 /// XM_005273683 /// XM_006716412 /// XM_006716413 </td> <td> 0006351 // transcription, DNA-templated // non-traceable author statement /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030097 // hemopoiesis // non-traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0043627 // response to estrogen // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from physical interaction /// 0048188 // Set1C/COMPASS complex // inferred from direct assay /// 0071339 // MLL1 complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred by curator /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 56.07 </td> <td> 313.44 </td> <td> 2.31 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 218381_s_at </td> <td> 218381_s_at </td> <td> NM_007279 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_007279.1 /DEF=Homo sapiens U2 small nuclear ribonucleoprotein auxiliary factor (65kD) (U2AF65), mRNA.  /FEA=mRNA /GEN=U2AF65 /PROD=U2 small nuclear ribonucleoprotein auxiliaryfactor (65kD) /DB_XREF=gi:6005925 /UG=Hs.7655 U2 small nuclear ribonucleoprotein auxiliary factor (65kD) /FL=gb:NM_007279.1 </td> <td> NM_007279 </td> <td> U2 small nuclear RNA auxiliary factor 2 </td> <td> U2AF2 </td> <td> 11338 </td> <td> NM_001012478 /// NM_007279 /// XM_006722994 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070742 // C2H2 zinc finger domain binding // inferred from electronic annotation </td> <td> 82.40 </td> <td> 238.25 </td> <td> 2.31 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 206566_at </td> <td> 206566_at </td> <td> NM_003045 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003045.1 /DEF=Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 (SLC7A1), mRNA.  /FEA=mRNA /GEN=SLC7A1 /PROD=solute carrier family 7 (cationic amino acidtransporter, y+ system), member 1 /DB_XREF=gi:4507046 /UG=Hs.2928 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 /FL=gb:AF078107.1 gb:NM_003045.1 </td> <td> NM_003045 </td> <td> solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 </td> <td> SLC7A1 </td> <td> 6541 </td> <td> NM_003045 /// XM_005266507 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0015809 // arginine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015181 // arginine transmembrane transporter activity // inferred from electronic annotation </td> <td> -24.12 </td> <td> 48.19 </td> <td> -2.31 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 211978_x_at </td> <td> 211978_x_at </td> <td> AI708767 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI708767 /FEA=EST /DB_XREF=gi:4998543 /DB_XREF=est:as35e01.x1 /CLONE=IMAGE:2319192 /UG=Hs.267690 KIAA1228 protein </td> <td> AI708767 </td> <td> peptidyl-prolyl cis-trans isomerase A-like /// peptidylprolyl isomerase A (cyclophilin A) </td> <td> LOC101060363 /// PPIA </td> <td> 5478 /// 101060363 </td> <td> NM_021130 /// NM_203430 /// NM_203431 /// XM_003960117 /// XM_005246048 /// XM_005249791 /// XM_005275876 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0002576 // platelet degranulation // traceable author statement /// 0006278 // RNA-dependent DNA replication // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019061 // uncoating of virus // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019076 // viral release from host cell // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030260 // entry into host cell // traceable author statement /// 0034389 // lipid particle organization // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // traceable author statement /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0075713 // establishment of integrated proviral latency // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046790 // virion binding // non-traceable author statement /// 0051082 // unfolded protein binding // traceable author statement </td> <td> -1214.92 </td> <td> 5225.94 </td> <td> -2.30 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202635_s_at </td> <td> 202635_s_at </td> <td> NM_005034 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005034.1 /DEF=Homo sapiens polymerase (RNA) II (DNA directed) polypeptide K (7.0kD) (POLR2K), mRNA.  /FEA=mRNA /GEN=POLR2K /PROD=polymerase (RNA) II (DNA directed) polypeptide K(7.0kD) /DB_XREF=gi:4826923 /UG=Hs.150675 polymerase (RNA) II (DNA directed) polypeptide K (7.0kD) /FL=gb:BC000806.1 gb:NM_005034.1 </td> <td> NM_005034 </td> <td> polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa </td> <td> POLR2K </td> <td> 5440 </td> <td> NM_005034 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006356 // regulation of transcription from RNA polymerase I promoter // traceable author statement /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006362 // transcription elongation from RNA polymerase I promoter // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0005666 // DNA-directed RNA polymerase III complex // not recorded /// 0005736 // DNA-directed RNA polymerase I complex // not recorded /// 0005829 // cytosol // traceable author statement </td> <td> 0001054 // RNA polymerase I activity // not recorded /// 0001055 // RNA polymerase II activity // not recorded /// 0001056 // RNA polymerase III activity // not recorded /// 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 30.92 </td> <td> 143.41 </td> <td> 2.30 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200762_at </td> <td> 200762_at </td> <td> NM_001386 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001386.1 /DEF=Homo sapiens dihydropyrimidinase-like 2 (DPYSL2), mRNA. /FEA=mRNA /GEN=DPYSL2 /PROD=dihydropyrimidinase-like 2 /DB_XREF=gi:4503376 /UG=Hs.173381 dihydropyrimidinase-like 2 /FL=gb:U17279.1 gb:D78013.1 gb:U97105.1 gb:NM_001386.1 </td> <td> NM_001386 </td> <td> dihydropyrimidinase-like 2 </td> <td> DPYSL2 </td> <td> 1808 </td> <td> NM_001197293 /// NM_001244604 /// NM_001386 </td> <td> 0001975 // response to amphetamine // inferred from electronic annotation /// 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006208 // pyrimidine nucleobase catabolic process // inferred from electronic annotation /// 0006897 // endocytosis // inferred from mutant phenotype /// 0007010 // cytoskeleton organization // inferred from sequence or structural similarity /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0014049 // positive regulation of glutamate secretion // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation /// 0048489 // synaptic vesicle transport // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004157 // dihydropyrimidinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation </td> <td> 131.45 </td> <td> 515.35 </td> <td> 2.30 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200966_x_at </td> <td> 200966_x_at </td> <td> NM_000034 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000034.1 /DEF=Homo sapiens aldolase A, fructose-bisphosphate (ALDOA), mRNA. /FEA=mRNA /GEN=ALDOA /PROD=aldolase A /DB_XREF=gi:4557304 /UG=Hs.273415 aldolase A, fructose-bisphosphate /FL=gb:BC004333.1 gb:M11560.1 gb:NM_000034.1 </td> <td> NM_000034 </td> <td> aldolase A, fructose-bisphosphate </td> <td> ALDOA </td> <td> 226 </td> <td> NM_000034 /// NM_001127617 /// NM_001243175 /// NM_001243177 /// NM_184041 /// NM_184043 /// XM_006721109 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006000 // fructose metabolic process // inferred from mutant phenotype /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // inferred from mutant phenotype /// 0006096 // glycolytic process // traceable author statement /// 0006754 // ATP biosynthetic process // inferred from mutant phenotype /// 0006941 // striated muscle contraction // inferred from mutant phenotype /// 0007015 // actin filament organization // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030388 // fructose 1,6-bisphosphate metabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0046716 // muscle cell cellular homeostasis // inferred from mutant phenotype /// 0051289 // protein homotetramerization // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031430 // M band // inferred from electronic annotation /// 0031674 // I band // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004332 // fructose-bisphosphate aldolase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0015631 // tubulin binding // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0042802 // identical protein binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070061 // fructose binding // inferred from direct assay </td> <td> -489.33 </td> <td> 1517.34 </td> <td> -2.30 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208616_s_at </td> <td> 208616_s_at </td> <td> U48297 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U48297.1 /DEF=Homo sapiens protein tyrosine phosphatase PTPCAAX2 (hPTPCAAX2) mRNA, complete cds.  /FEA=mRNA /GEN=hPTPCAAX2 /PROD=protein tyrosine phosphatase PTPCAAX2 /DB_XREF=gi:1777756 /UG=Hs.82911 protein tyrosine phosphatase type IVA, member 2 /FL=gb:U48297.1 gb:NM_003479.1 gb:AF208850.1 </td> <td> U48297 </td> <td> protein tyrosine phosphatase type IVA, member 2 </td> <td> PTP4A2 </td> <td> 8073 </td> <td> NM_001195100 /// NM_001195101 /// NM_003479 /// NM_080391 /// NM_080392 /// XM_005271229 /// XM_005271230 /// XM_005271231 /// XM_005271232 /// XM_006710927 /// XM_006710928 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004727 // prenylated protein tyrosine phosphatase activity // traceable author statement /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> -127.62 </td> <td> 1095.46 </td> <td> -2.30 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 203060_s_at </td> <td> 203060_s_at </td> <td> AF074331 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF074331.1 /DEF=Homo sapiens PAPS synthetase-2 (PAPSS2) mRNA, complete cds. /FEA=mRNA /GEN=PAPSS2 /PROD=PAPS synthetase-2 /DB_XREF=gi:5052074 /UG=Hs.274230 3-phosphoadenosine 5-phosphosulfate synthase 2 /FL=gb:AF150754.2 gb:AF313907.1 gb:AF091242.1 gb:NM_004670.1 gb:AF074331.1 gb:AF173365.1 </td> <td> AF074331 </td> <td> 3'-phosphoadenosine 5'-phosphosulfate synthase 2 </td> <td> PAPSS2 </td> <td> 9060 </td> <td> NM_001015880 /// NM_004670 </td> <td> 0000103 // sulfate assimilation // inferred from electronic annotation /// 0001501 // skeletal system development // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement /// 0050428 // 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process // traceable author statement /// 0060348 // bone development // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004020 // adenylylsulfate kinase activity // inferred from electronic annotation /// 0004781 // sulfate adenylyltransferase (ATP) activity // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from sequence or structural similarity </td> <td> -106.35 </td> <td> 393.80 </td> <td> -2.30 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201590_x_at </td> <td> 201590_x_at </td> <td> NM_004039 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004039.1 /DEF=Homo sapiens annexin A2 (ANXA2), mRNA. /FEA=mRNA /GEN=ANXA2 /PROD=annexin A2 /DB_XREF=gi:4757755 /UG=Hs.217493 annexin A2 /FL=gb:BC001748.1 gb:D00017.1 gb:NM_004039.1 </td> <td> NM_004039 </td> <td> annexin A2 </td> <td> ANXA2 </td> <td> 302 </td> <td> NM_001002857 /// NM_001002858 /// NM_001136015 /// NM_004039 </td> <td> 0001525 // angiogenesis // inferred from expression pattern /// 0001765 // membrane raft assembly // inferred from mutant phenotype /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006900 // membrane budding // inferred from mutant phenotype /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0031340 // positive regulation of vesicle fusion // inferred from direct assay /// 0036035 // osteoclast development // inferred from direct assay /// 0042730 // fibrinolysis // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0051099 // positive regulation of binding // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from direct assay /// 0071229 // cellular response to acid // inferred from electronic annotation /// 0072661 // protein targeting to plasma membrane // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019897 // extrinsic component of plasma membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031902 // late endosome membrane // inferred from direct assay /// 0031982 // vesicle // inferred from electronic annotation /// 0035749 // myelin sheath adaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044354 // macropinosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from mutant phenotype /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0019834 // phospholipase A2 inhibitor activity // inferred from direct assay /// 0044548 // S100 protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> -738.58 </td> <td> 4131.94 </td> <td> -2.30 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 210495_x_at </td> <td> 210495_x_at </td> <td> AF130095 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF130095.1 /DEF=Homo sapiens clone FLC0562 PRO2841 mRNA, complete cds. /FEA=mRNA /PROD=PRO2841 /DB_XREF=gi:11493493 /UG=Hs.287820 fibronectin 1 /FL=gb:AF130095.1 </td> <td> AF130095 </td> <td> fibronectin 1 </td> <td> FN1 </td> <td> 2335 </td> <td> NM_002026 /// NM_054034 /// NM_212474 /// NM_212475 /// NM_212476 /// NM_212478 /// NM_212482 /// XM_005246397 /// XM_005246398 /// XM_005246399 /// XM_005246400 /// XM_005246401 /// XM_005246402 /// XM_005246403 /// XM_005246404 /// XM_005246405 /// XM_005246406 /// XM_005246407 /// XM_005246408 /// XM_005246409 /// XM_005246410 /// XM_005246411 /// XM_005246412 /// XM_005246413 /// XM_005246414 /// XM_005246415 /// XM_005246416 /// XM_005246417 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006953 // acute-phase response // inferred from electronic annotation /// 0007044 // cell-substrate junction assembly // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007161 // calcium-independent cell-matrix adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009611 // response to wounding // non-traceable author statement /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0018149 // peptide cross-linking // inferred from direct assay /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005577 // fibrinogen complex // inferred from direct assay /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0005178 // integrin binding // inferred from direct assay /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0008201 // heparin binding // non-traceable author statement /// 0016504 // peptidase activator activity // inferred from electronic annotation </td> <td> -572.95 </td> <td> 3542.53 </td> <td> -2.30 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 213109_at </td> <td> 213109_at </td> <td> N25621 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N25621 /FEA=EST /DB_XREF=gi:1139969 /DB_XREF=est:yx78a01.s1 /CLONE=IMAGE:267816 /UG=Hs.170204 KIAA0551 protein /FL=gb:AF172264.1 </td> <td> N25621 </td> <td> TRAF2 and NCK interacting kinase </td> <td> TNIK </td> <td> 23043 </td> <td> NM_001161560 /// NM_001161561 /// NM_001161562 /// NM_001161563 /// NM_001161564 /// NM_001161565 /// NM_001161566 /// NM_015028 /// NR_027767 /// XM_006713555 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007256 // activation of JNKK activity // inferred from direct assay /// 0007256 // activation of JNKK activity // inferred from mutant phenotype /// 0007399 // nervous system development // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048814 // regulation of dendrite morphogenesis // inferred from direct assay /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 43.90 </td> <td> 129.50 </td> <td> 2.30 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200641_s_at </td> <td> 200641_s_at </td> <td> U28964 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U28964.1 /DEF=Homo sapiens 14-3-3 protein mRNA, complete cds. /FEA=mRNA /PROD=14-3-3 protein /DB_XREF=gi:899458 /UG=Hs.75103 tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, zeta polypeptide /FL=gb:BC003623.1 gb:M86400.1 gb:NM_003406.1 gb:U28964.1 </td> <td> U28964 </td> <td> tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta </td> <td> YWHAZ </td> <td> 7534 </td> <td> NM_001135699 /// NM_001135700 /// NM_001135701 /// NM_001135702 /// NM_003406 /// NM_145690 /// XM_005251060 /// XM_005251061 /// XM_005251062 /// XM_005251063 </td> <td> 0002553 // histamine secretion by mast cell // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010941 // regulation of cell death // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042629 // mast cell granule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -189.62 </td> <td> 992.29 </td> <td> -2.30 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 209530_at </td> <td> 209530_at </td> <td> U07139 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U07139.1 /DEF=Human voltage-gated calcium channel beta subunit mRNA, complete cds.  /FEA=mRNA /PROD=voltage-gated calcium channel beta subunit /DB_XREF=gi:463890 /UG=Hs.250712 calcium channel, voltage-dependent, beta 3 subunit /FL=gb:NM_000725.1 gb:U07139.1 </td> <td> U07139 </td> <td> calcium channel, voltage-dependent, beta 3 subunit </td> <td> CACNB3 </td> <td> 784 </td> <td> NM_000725 /// NM_001206915 /// NM_001206916 /// NM_001206917 /// XM_005269142 /// XM_006719590 /// XM_006719591 /// XM_006719592 </td> <td> 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0051899 // membrane depolarization // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement /// 0005891 // voltage-gated calcium channel complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation </td> <td> 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // inferred from direct assay /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation </td> <td> -37.87 </td> <td> 69.39 </td> <td> -2.29 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202143_s_at </td> <td> 202143_s_at </td> <td> NM_006710 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006710.1 /DEF=Homo sapiens COP9 homolog (COP9), mRNA. /FEA=mRNA /GEN=COP9 /PROD=COP9 homolog /DB_XREF=gi:5729778 /UG=Hs.75193 COP9 homolog /FL=gb:BC003090.1 gb:U51205.1 gb:NM_006710.1 </td> <td> NM_006710 </td> <td> COP9 signalosome subunit 8 </td> <td> COPS8 </td> <td> 10920 </td> <td> NM_006710 /// NM_198189 </td> <td> 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0010388 // cullin deneddylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0008180 // COP9 signalosome // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -77.43 </td> <td> 222.86 </td> <td> -2.29 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 207821_s_at </td> <td> 207821_s_at </td> <td> NM_005607 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005607.1 /DEF=Homo sapiens PTK2 protein tyrosine kinase 2 (PTK2), mRNA. /FEA=mRNA /GEN=PTK2 /PROD=PTK2 protein tyrosine kinase 2 /DB_XREF=gi:5032000 /UG=Hs.740 PTK2 protein tyrosine kinase 2 /FL=gb:L05186.1 gb:NM_005607.1 </td> <td> NM_005607 </td> <td> protein tyrosine kinase 2 </td> <td> PTK2 </td> <td> 5747 </td> <td> NM_001199649 /// NM_005607 /// NM_153831 /// XM_005251003 /// XM_005251004 /// XM_005251005 /// XM_005251006 /// XM_005251007 /// XM_005251008 /// XM_005251009 /// XM_005251010 /// XM_005251011 /// XM_005251012 /// XM_005251013 /// XM_005251014 /// XM_006716606 /// XM_006716607 /// XM_006716608 /// XM_006716609 /// XM_006716610 </td> <td> 0000165 // MAPK cascade // inferred from electronic annotation /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0001525 // angiogenesis // traceable author statement /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001890 // placenta development // traceable author statement /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0003007 // heart morphogenesis // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007172 // signal complex assembly // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from mutant phenotype /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0009790 // embryo development // traceable author statement /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010594 // regulation of endothelial cell migration // traceable author statement /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from mutant phenotype /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0021955 // central nervous system neuron axonogenesis // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0030010 // establishment of cell polarity // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0030644 // cellular chloride ion homeostasis // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // traceable author statement /// 0032355 // response to estradiol // inferred from electronic annotation /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0038007 // netrin-activated signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0040023 // establishment of nucleus localization // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045667 // regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0045909 // positive regulation of vasodilation // inferred from electronic annotation /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048870 // cell motility // traceable author statement /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // traceable author statement /// 0051893 // regulation of focal adhesion assembly // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling // inferred from mutant phenotype /// 0051964 // negative regulation of synapse assembly // inferred from electronic annotation /// 0060252 // positive regulation of glial cell proliferation // inferred from electronic annotation /// 0060396 // growth hormone receptor signaling pathway // inferred from direct assay /// 2000060 // positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0004672 // protein kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008432 // JUN kinase binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation </td> <td> -41.60 </td> <td> 243.00 </td> <td> -2.29 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 212923_s_at </td> <td> 212923_s_at </td> <td> AK024828 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024828.1 /DEF=Homo sapiens cDNA: FLJ21175 fis, clone CAS11071. /FEA=mRNA /DB_XREF=gi:10437233 /UG=Hs.69388 hypothetical protein FLJ20505 </td> <td> AK024828 </td> <td> PX domain containing 1 </td> <td> PXDC1 </td> <td> 221749 </td> <td> NM_183373 /// XR_241883 </td> <td> 0007154 // cell communication // inferred from electronic annotation </td> <td>  </td> <td> 0035091 // phosphatidylinositol binding // inferred from electronic annotation </td> <td> 126.35 </td> <td> 421.80 </td> <td> 2.29 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 216221_s_at </td> <td> 216221_s_at </td> <td> D87078 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D87078.2 /DEF=Homo sapiens mRNA for KIAA0235 protein, partial cds. /FEA=mRNA /GEN=KIAA0235 /PROD=KIAA0235 protein /DB_XREF=gi:6634004 /UG=Hs.6151 pumilio (Drosophila) homolog 2 </td> <td> D87078 </td> <td> pumilio RNA-binding family member 2 </td> <td> PUM2 </td> <td> 23369 </td> <td> NM_001282752 /// NM_001282790 /// NM_001282791 /// NM_015317 /// XM_005262607 /// XM_005262609 /// XM_005262610 /// XM_006711972 /// XM_006711973 /// XM_006711974 /// XM_006711975 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation /// 0034063 // stress granule assembly // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -37.38 </td> <td> 336.99 </td> <td> -2.29 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201426_s_at </td> <td> 201426_s_at </td> <td> AI922599 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI922599 /FEA=EST /DB_XREF=gi:5658563 /DB_XREF=est:wm90b11.x1 /CLONE=IMAGE:2443197 /UG=Hs.297753 vimentin /FL=gb:BC000163.2 gb:NM_003380.1 </td> <td> AI922599 </td> <td> vimentin </td> <td> VIM </td> <td> 7431 </td> <td> NM_003380 /// XM_006717500 </td> <td> 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0014002 // astrocyte development // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030049 // muscle filament sliding // traceable author statement /// 0045103 // intermediate filament-based process // inferred from electronic annotation /// 0045109 // intermediate filament organization // inferred from electronic annotation /// 0060020 // Bergmann glial cell differentiation // inferred from electronic annotation /// 0070307 // lens fiber cell development // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005777 // peroxisome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005882 // intermediate filament // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001948 // glycoprotein binding // inferred from physical interaction /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from direct assay /// 0005212 // structural constituent of eye lens // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0097110 // scaffold protein binding // inferred from physical interaction </td> <td> -738.53 </td> <td> 4457.64 </td> <td> -2.28 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 219176_at </td> <td> 219176_at </td> <td> NM_024520 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024520.1 /DEF=Homo sapiens hypothetical protein FLJ22555 (FLJ22555), mRNA. /FEA=mRNA /GEN=FLJ22555 /PROD=hypothetical protein FLJ22555 /DB_XREF=gi:13375659 /UG=Hs.3592 hypothetical protein FLJ22555 /FL=gb:NM_024520.1 </td> <td> NM_024520 </td> <td> chromosome 2 open reading frame 47 </td> <td> C2orf47 </td> <td> 79568 </td> <td> NM_024520 /// XM_005246852 /// XR_427111 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation </td> <td>  </td> <td> 34.75 </td> <td> 188.30 </td> <td> 2.28 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208398_s_at </td> <td> 208398_s_at </td> <td> NM_004865 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004865.1 /DEF=Homo sapiens TBP-like 1 (TBPL1), mRNA. /FEA=mRNA /GEN=TBPL1 /PROD=TBP-like 1 /DB_XREF=gi:4759233 /UG=Hs.13993 TBP-like 1 /FL=gb:AF130312.1 gb:NM_004865.1 </td> <td> NM_004865 </td> <td> TBP-like 1 </td> <td> TBPL1 </td> <td> 9519 </td> <td> NM_001253676 /// NM_004865 </td> <td> 0001675 // acrosome assembly // inferred from electronic annotation /// 0006235 // dTTP biosynthetic process // inferred from electronic annotation /// 0006352 // DNA-templated transcription, initiation // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007289 // spermatid nucleus differentiation // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005672 // transcription factor TFIIA complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -33.92 </td> <td> 165.76 </td> <td> -2.28 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 210501_x_at </td> <td> 210501_x_at </td> <td> AF119846 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF119846.1 /DEF=Homo sapiens PRO1474 mRNA, complete cds. /FEA=mRNA /PROD=PRO1474 /DB_XREF=gi:7770128 /UG=Hs.324925 LATS (large tumor suppressor, Drosophila) homolog 1 /FL=gb:AF119846.1 </td> <td> AF119846 </td> <td> eukaryotic translation initiation factor 3, subunit K </td> <td> EIF3K </td> <td> 27335 </td> <td> NM_013234 /// XM_006723147 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation </td> <td> -63.62 </td> <td> 652.59 </td> <td> -2.28 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202218_s_at </td> <td> 202218_s_at </td> <td> NM_004265 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004265.1 /DEF=Homo sapiens delta-6 fatty acid desaturase (FADSD6), mRNA. /FEA=mRNA /GEN=FADSD6 /PROD=delta-6 fatty acid desaturase /DB_XREF=gi:4758333 /UG=Hs.184641 fatty acid desaturase 2 /FL=gb:AF084559.1 gb:AF126799.1 gb:NM_004265.1 </td> <td> NM_004265 </td> <td> fatty acid desaturase 2 </td> <td> FADS2 </td> <td> 9415 </td> <td> NM_001281501 /// NM_001281502 /// NM_004265 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006636 // unsaturated fatty acid biosynthetic process // inferred from electronic annotation /// 0033559 // unsaturated fatty acid metabolic process // traceable author statement /// 0036109 // alpha-linolenic acid metabolic process // traceable author statement /// 0043651 // linoleic acid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004768 // stearoyl-CoA 9-desaturase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016717 // oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation </td> <td> 41.88 </td> <td> 150.89 </td> <td> 2.28 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201298_s_at </td> <td> 201298_s_at </td> <td> BC003398 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003398.1 /DEF=Homo sapiens, hypothetical protein FLJ10788, clone MGC:4929, mRNA, complete cds.  /FEA=mRNA /PROD=hypothetical protein FLJ10788 /DB_XREF=gi:13097287 /UG=Hs.196437 hypothetical protein FLJ10788 /FL=gb:AB016839.1 gb:BC003398.1 gb:NM_018221.1 </td> <td> BC003398 </td> <td> MOB kinase activator 1A </td> <td> MOB1A </td> <td> 55233 </td> <td> NM_018221 </td> <td> 0035329 // hippo signaling // inferred from direct assay /// 0035329 // hippo signaling // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -57.20 </td> <td> 194.20 </td> <td> -2.28 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202797_at </td> <td> 202797_at </td> <td> NM_014016 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014016.1 /DEF=Homo sapiens KIAA0851 protein (KIAA0851), mRNA. /FEA=mRNA /GEN=KIAA0851 /PROD=KIAA0851 protein /DB_XREF=gi:7662337 /UG=Hs.5867 KIAA0851 protein /FL=gb:AB020658.1 gb:AL136831.1 gb:NM_014016.1 </td> <td> NM_014016 </td> <td> SAC1 suppressor of actin mutations 1-like (yeast) </td> <td> SACM1L </td> <td> 22908 </td> <td> NM_014016 /// XR_427259 </td> <td> 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046856 // phosphatidylinositol dephosphorylation // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from electronic annotation /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from electronic annotation </td> <td> 0004438 // phosphatidylinositol-3-phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from sequence or structural similarity /// 0034593 // phosphatidylinositol bisphosphate phosphatase activity // inferred from electronic annotation /// 0042578 // phosphoric ester hydrolase activity // inferred from electronic annotation /// 0043812 // phosphatidylinositol-4-phosphate phosphatase activity // inferred from electronic annotation </td> <td> 33.97 </td> <td> 117.89 </td> <td> 2.28 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208988_at </td> <td> 208988_at </td> <td> BE675843 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE675843 /FEA=EST /DB_XREF=gi:10036384 /DB_XREF=est:7f17b04.x1 /CLONE=IMAGE:3294895 /UG=Hs.219614 f-box and leucine-rich repeat protein 11 /FL=gb:AF179221.1 </td> <td> BE675843 </td> <td> lysine (K)-specific demethylase 2A </td> <td> KDM2A </td> <td> 22992 </td> <td> NM_001256405 /// NM_012308 /// NR_027473 /// XM_006718479 /// XM_006718480 /// XM_006718481 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070544 // histone H3-K36 demethylation // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0045322 // unmethylated CpG binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from electronic annotation </td> <td> -24.83 </td> <td> 106.36 </td> <td> -2.28 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 203931_s_at </td> <td> 203931_s_at </td> <td> NM_002949 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002949.1 /DEF=Homo sapiens mitochondrial ribosomal protein L12 (MRPL12), mRNA. /FEA=mRNA /GEN=MRPL12 /PROD=mitochondrial ribosomal protein L12 /DB_XREF=gi:4506672 /UG=Hs.109059 mitochondrial ribosomal protein L12 /FL=gb:BC002344.1 gb:U25041.1 gb:AF105278.1 gb:NM_002949.1 </td> <td> NM_002949 </td> <td> mitochondrial ribosomal protein L12 </td> <td> MRPL12 </td> <td> 6182 </td> <td> NM_002949 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0000098 // sulfur amino acid catabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006390 // transcription from mitochondrial promoter // inferred from direct assay /// 0006412 // translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006835 // dicarboxylic acid transport // traceable author statement /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0070221 // sulfide oxidation, using sulfide:quinone oxidoreductase // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005310 // dicarboxylic acid transmembrane transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 47.45 </td> <td> 118.80 </td> <td> 2.28 </td> <td> 0.05 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 210926_at </td> <td> 210926_at </td> <td> AY014272 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AY014272.1 /DEF=Homo sapiens FKSG30 (FKSG30) mRNA, complete cds. /FEA=mRNA /GEN=FKSG30 /PROD=FKSG30 /DB_XREF=gi:12408251 /UG=Hs.315492 Homo sapiens FKSG30 (FKSG30) mRNA, complete cds /FL=gb:AY014272.1 </td> <td> AY014272 </td> <td> POTE ankyrin domain family, member K, pseudogene </td> <td> POTEKP </td> <td> 440915 </td> <td> NM_001017421 /// NR_033885 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> 53.15 </td> <td> 119.85 </td> <td> 2.28 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 213588_x_at </td> <td> 213588_x_at </td> <td> AA838274 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA838274 /FEA=EST /DB_XREF=gi:2913073 /DB_XREF=est:oe90c01.s1 /CLONE=IMAGE:1418880 /UG=Hs.738 ribosomal protein L14 </td> <td> AA838274 </td> <td> ribosomal protein L14 </td> <td> RPL14 </td> <td> 9045 </td> <td> NM_001034996 /// NM_003973 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042273 // ribosomal large subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -130.40 </td> <td> 1410.15 </td> <td> -2.28 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 214003_x_at </td> <td> 214003_x_at </td> <td> BF184532 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF184532 /FEA=EST /DB_XREF=gi:11062829 /DB_XREF=est:601842837F1 /CLONE=IMAGE:4063593 /UG=Hs.8102 ribosomal protein S20 </td> <td> BF184532 </td> <td> ribosomal protein S20 /// small nucleolar RNA, C/D box 54 </td> <td> RPS20 /// SNORD54 </td> <td> 6224 /// 26795 </td> <td> NM_001023 /// NM_001146227 /// NR_002437 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -420.75 </td> <td> 3156.72 </td> <td> -2.28 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 209331_s_at </td> <td> 209331_s_at </td> <td> AA723514 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA723514 /FEA=EST /DB_XREF=gi:2741221 /DB_XREF=est:zg72g05.s1 /CLONE=IMAGE:398936 /UG=Hs.42712 MAX protein /FL=gb:BC003525.1 </td> <td> AA723514 </td> <td> MYC associated factor X </td> <td> MAX </td> <td> 4149 </td> <td> NM_001271068 /// NM_001271069 /// NM_002382 /// NM_145112 /// NM_145113 /// NM_145114 /// NM_145116 /// NM_197957 /// NR_073137 /// NR_073138 /// XR_429315 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -55.80 </td> <td> 222.75 </td> <td> -2.28 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 218317_x_at </td> <td> 218317_x_at </td> <td> NM_024044 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024044.1 /DEF=Homo sapiens hypothetical protein MGC5178 (MGC5178), mRNA. /FEA=mRNA /GEN=MGC5178 /PROD=hypothetical protein MGC5178 /DB_XREF=gi:13129003 /UG=Hs.326067 hypothetical protein MGC5178 /FL=gb:BC000754.1 gb:BC000803.1 gb:NM_024044.1 </td> <td> NM_024044 </td> <td> structure-specific endonuclease subunit SLX1-like /// SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae) /// SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) </td> <td> LOC101929864 /// SLX1A /// SLX1B </td> <td> 79008 /// 548593 /// 101929864 </td> <td> NM_001014999 /// NM_001015000 /// NM_024044 /// NM_178044 /// XM_006726622 /// XM_006726623 </td> <td> 0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0000737 // DNA catabolic process, endonucleolytic // inferred from direct assay /// 0000737 // DNA catabolic process, endonucleolytic // inferred from electronic annotation /// 0006281 // DNA repair // inferred from mutant phenotype /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0010792 // DNA double-strand break processing involved in repair via single-strand annealing // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0033557 // Slx1-Slx4 complex // inferred from direct assay </td> <td> 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008821 // crossover junction endodeoxyribonuclease activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017108 // 5'-flap endonuclease activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 42.87 </td> <td> 104.19 </td> <td> 2.28 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 211764_s_at </td> <td> 211764_s_at </td> <td> BC005980 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005980.1 /DEF=Homo sapiens, ubiquitin-conjugating enzyme E2D 1 (homologous to yeast UBC45), clone MGC:14673, mRNA, complete cds.  /FEA=mRNA /PROD=ubiquitin-conjugating enzyme E2D 1 (homologousto yeast UBC45) /DB_XREF=gi:13543662 /FL=gb:BC005980.1 </td> <td> BC005980 </td> <td> ubiquitin-conjugating enzyme E2D 1 </td> <td> UBE2D1 </td> <td> 7321 </td> <td> NM_001204880 /// NM_003338 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030509 // BMP signaling pathway // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0071456 // cellular response to hypoxia // traceable author statement </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> 30.20 </td> <td> 98.03 </td> <td> 2.28 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 203956_at </td> <td> 203956_at </td> <td> NM_014941 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014941.1 /DEF=Homo sapiens KIAA0852 protein (KIAA0852), mRNA. /FEA=mRNA /GEN=KIAA0852 /PROD=KIAA0852 protein /DB_XREF=gi:7662339 /UG=Hs.35276 KIAA0852 protein /FL=gb:AB020659.1 gb:NM_014941.1 </td> <td> NM_014941 </td> <td> MORC family CW-type zinc finger 2 </td> <td> MORC2 </td> <td> 22880 </td> <td> NM_014941 /// XM_005261391 /// XM_005261392 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation </td> <td> 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 48.78 </td> <td> 109.96 </td> <td> 2.27 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 218905_at </td> <td> 218905_at </td> <td> NM_017864 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017864.1 /DEF=Homo sapiens hypothetical protein FLJ20530 (FLJ20530), mRNA. /FEA=mRNA /GEN=FLJ20530 /PROD=hypothetical protein FLJ20530 /DB_XREF=gi:8923495 /UG=Hs.279521 hypothetical protein FLJ20530 /FL=gb:NM_017864.1 </td> <td> NM_017864 </td> <td> integrator complex subunit 8 </td> <td> INTS8 </td> <td> 55656 </td> <td> NM_017864 /// NR_073444 /// NR_073445 /// XM_006716602 /// XM_006716603 </td> <td> 0016180 // snRNA processing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0032039 // integrator complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 29.93 </td> <td> 130.91 </td> <td> 2.27 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 222006_at </td> <td> 222006_at </td> <td> AI359368 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI359368 /FEA=EST /DB_XREF=gi:4110989 /DB_XREF=est:qy27h02.x1 /CLONE=IMAGE:2013267 /UG=Hs.120165 leucine zipper-EF-hand containing transmembrane protein 1 </td> <td> AI359368 </td> <td> leucine zipper-EF-hand containing transmembrane protein 1 </td> <td> LETM1 </td> <td> 3954 </td> <td> NM_012318 /// XM_005247970 /// XM_006713884 </td> <td> 0042407 // cristae formation // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 39.55 </td> <td> 78.85 </td> <td> 2.27 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 209705_at </td> <td> 209705_at </td> <td> BG033764 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG033764 /FEA=EST /DB_XREF=gi:12426228 /DB_XREF=est:602302025F1 /CLONE=IMAGE:4403238 /UG=Hs.31016 putative DNA binding protein /FL=gb:AF073293.1 </td> <td> BG033764 </td> <td> metal response element binding transcription factor 2 </td> <td> MTF2 </td> <td> 22823 </td> <td> NM_001164391 /// NM_001164392 /// NM_001164393 /// NM_007358 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007379 // segment specification // inferred from sequence or structural similarity /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048863 // stem cell differentiation // inferred from sequence or structural similarity /// 0061086 // negative regulation of histone H3-K27 methylation // inferred from sequence or structural similarity /// 0061087 // positive regulation of histone H3-K27 methylation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035064 // methylated histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 37.40 </td> <td> 128.55 </td> <td> 2.27 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 220960_x_at </td> <td> 220960_x_at </td> <td> NM_000983 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000983.1 /DEF=Homo sapiens ribosomal protein L22 (RPL22), mRNA. /FEA=mRNA /GEN=RPL22 /PROD=ribosomal protein L22 /DB_XREF=gi:4506612 /UG=Hs.99914 ribosomal protein L22 /FL=gb:NM_000983.1 </td> <td> NM_000983 </td> <td> ribosomal protein L22 </td> <td> RPL22 </td> <td> 6146 </td> <td> NM_000983 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -223.13 </td> <td> 2395.54 </td> <td> -2.27 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200889_s_at </td> <td> 200889_s_at </td> <td> AI016620 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI016620 /FEA=EST /DB_XREF=gi:3230956 /DB_XREF=est:ov30e10.x1 /CLONE=IMAGE:1638858 /UG=Hs.250773 signal sequence receptor, alpha (translocon-associated protein alpha) /FL=gb:AF156965.1 gb:NM_003144.2 </td> <td> AI016620 </td> <td> signal sequence receptor, alpha </td> <td> SSR1 </td> <td> 6745 </td> <td> NM_001292008 /// NM_003144 /// NR_120448 </td> <td> 0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 68.85 </td> <td> 301.98 </td> <td> 2.27 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 217962_at </td> <td> 217962_at </td> <td> NM_018648 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018648.1 /DEF=Homo sapiens nucleolar protein family A, member 3 (HACA small nucleolar RNPs) (NOLA3), mRNA.  /FEA=mRNA /GEN=NOLA3 /PROD=nucleolar protein family A, member 3 (HACAsmall nucleolar RNPs) /DB_XREF=gi:8923941 /UG=Hs.14317 nucleolar protein family A, member 3 (HACA small nucleolar RNPs) /FL=gb:AB043104.1 gb:NM_018648.1 </td> <td> NM_018648 </td> <td> NOP10 ribonucleoprotein </td> <td> NOP10 </td> <td> 55505 </td> <td> NM_018648 </td> <td> 0001522 // pseudouridine synthesis // non-traceable author statement /// 0006364 // rRNA processing // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005732 // small nucleolar ribonucleoprotein complex // traceable author statement /// 0015030 // Cajal body // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0072588 // box H/ACA RNP complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030515 // snoRNA binding // inferred from electronic annotation </td> <td> 151.80 </td> <td> 748.12 </td> <td> 2.27 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 221935_s_at </td> <td> 221935_s_at </td> <td> AK023140 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK023140.1 /DEF=Homo sapiens cDNA FLJ13078 fis, clone NT2RP3002002. /FEA=mRNA /DB_XREF=gi:10434924 /UG=Hs.5997 hypothetical protein FLJ13078 </td> <td> AK023140 </td> <td> EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase </td> <td> EOGT </td> <td> 285203 </td> <td> NM_001278689 /// NM_173654 /// NR_103826 /// XM_005264743 /// XM_005264744 /// XM_006713111 </td> <td> 0006493 // protein O-linked glycosylation // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation </td> <td> 0016262 // protein N-acetylglucosaminyltransferase activity // inferred from sequence or structural similarity /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> 37.55 </td> <td> 138.78 </td> <td> 2.27 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200819_s_at </td> <td> 200819_s_at </td> <td> NM_001018 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001018.1 /DEF=Homo sapiens ribosomal protein S15 (RPS15), mRNA. /FEA=mRNA /GEN=RPS15 /PROD=ribosomal protein S15 /DB_XREF=gi:4506686 /UG=Hs.133230 ribosomal protein S15 /FL=gb:J02984.1 gb:NM_001018.1 </td> <td> NM_001018 </td> <td> ribosomal protein S15 </td> <td> RPS15 </td> <td> 6209 </td> <td> NM_001018 </td> <td> 0000056 // ribosomal small subunit export from nucleus // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -671.65 </td> <td> 3356.00 </td> <td> -2.27 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 212380_at </td> <td> 212380_at </td> <td> D43949 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D43949.1 /DEF=Human mRNA for KIAA0082 gene, partial cds. /FEA=mRNA /GEN=KIAA0082 /DB_XREF=gi:603952 /UG=Hs.154045 KIAA0082 protein </td> <td> D43949 </td> <td> cap methyltransferase 1 </td> <td> CMTR1 </td> <td> 23070 </td> <td> NM_015050 /// XM_005248955 /// XM_006715028 </td> <td> 0006370 // 7-methylguanosine mRNA capping // inferred from direct assay /// 0006370 // 7-methylguanosine mRNA capping // inferred from mutant phenotype /// 0006397 // mRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0080009 // mRNA methylation // inferred from direct assay /// 0097309 // cap1 mRNA methylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004483 // mRNA (nucleoside-2'-O-)-methyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 29.25 </td> <td> 84.65 </td> <td> 2.27 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 214336_s_at </td> <td> 214336_s_at </td> <td> AI621079 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI621079 /FEA=EST /DB_XREF=gi:4630205 /DB_XREF=est:ts76f11.x1 /CLONE=IMAGE:2237229 /UG=Hs.75887 coatomer protein complex, subunit alpha </td> <td> AI621079 </td> <td> coatomer protein complex, subunit alpha </td> <td> COPA </td> <td> 1314 </td> <td> NM_001098398 /// NM_004371 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0009451 // RNA modification // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030157 // pancreatic juice secretion // inferred from direct assay /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from direct assay /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005179 // hormone activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -55.95 </td> <td> 109.88 </td> <td> -2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202029_x_at </td> <td> 202029_x_at </td> <td> NM_000999 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000999.1 /DEF=Homo sapiens ribosomal protein L38 (RPL38), mRNA. /FEA=mRNA /GEN=RPL38 /PROD=ribosomal protein L38 /DB_XREF=gi:4506644 /UG=Hs.2017 ribosomal protein L38 /FL=gb:BC000603.1 gb:NM_000999.1 </td> <td> NM_000999 </td> <td> ribosomal protein L38 </td> <td> RPL38 </td> <td> 6169 </td> <td> NM_000999 /// NM_001035258 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0034463 // 90S preribosome assembly // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048318 // axial mesoderm development // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0033291 // eukaryotic 80S initiation complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement </td> <td> -415.30 </td> <td> 3085.38 </td> <td> -2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201875_s_at </td> <td> 201875_s_at </td> <td> NM_024569 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024569.1 /DEF=Homo sapiens hypothetical protein FLJ21047 (FLJ21047), mRNA. /FEA=mRNA /GEN=FLJ21047 /PROD=hypothetical protein FLJ21047 /DB_XREF=gi:13375739 /UG=Hs.14891 hypothetical protein FLJ21047 /FL=gb:NM_024569.1 </td> <td> NM_024569 </td> <td> myelin protein zero-like 1 </td> <td> MPZL1 </td> <td> 9019 </td> <td> NM_001146191 /// NM_003953 /// NM_024569 /// XM_006711614 </td> <td> 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement </td> <td> 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 31.75 </td> <td> 118.33 </td> <td> 2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 204387_x_at </td> <td> 204387_x_at </td> <td> NM_024026 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024026.1 /DEF=Homo sapiens hypothetical protein MGC3243 (MGC3243), mRNA. /FEA=mRNA /GEN=MGC3243 /PROD=hypothetical protein MGC3243 /DB_XREF=gi:13128969 /UG=Hs.182695 hypothetical protein MGC3243 /FL=gb:BC000002.1 gb:NM_024026.1 </td> <td> NM_024026 </td> <td> mitochondrial ribosomal protein L57 </td> <td> MRPL57 </td> <td> 78988 </td> <td> NM_024026 </td> <td> 0006412 // translation // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation </td> <td> 32.00 </td> <td> 64.70 </td> <td> 2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 209043_at </td> <td> 209043_at </td> <td> AF033026 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF033026.1 /DEF=Homo sapiens bifunctional ATP sulfurylaseadenosine 5-phosphosulfate kinase mRNA, complete cds.  /FEA=mRNA /PROD=bifunctional ATP sulfurylaseadenosine5-phosphosulfate kinase /DB_XREF=gi:3378100 /UG=Hs.3833 3-phosphoadenosine 5-phosphosulfate synthase 1 /FL=gb:AF033026.1 gb:AF016496.1 gb:NM_005443.1 gb:AF105227.1 </td> <td> AF033026 </td> <td> 3'-phosphoadenosine 5'-phosphosulfate synthase 1 </td> <td> PAPSS1 </td> <td> 9061 </td> <td> NM_005443 </td> <td> 0000103 // sulfate assimilation // inferred from electronic annotation /// 0001501 // skeletal system development // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement /// 0050428 // 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004020 // adenylylsulfate kinase activity // inferred from electronic annotation /// 0004781 // sulfate adenylyltransferase (ATP) activity // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from sequence or structural similarity </td> <td> 105.80 </td> <td> 446.52 </td> <td> 2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 221798_x_at </td> <td> 221798_x_at </td> <td> AI183766 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI183766 /FEA=EST /DB_XREF=gi:3734404 /DB_XREF=est:qe17g06.x1 /CLONE=IMAGE:1739290 /UG=Hs.182426 ribosomal protein S2 </td> <td> AI183766 </td> <td>  </td> <td> RP5-882O7.1 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -1207.12 </td> <td> 5269.26 </td> <td> -2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 204838_s_at </td> <td> 204838_s_at </td> <td> NM_014381 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014381.1 /DEF=Homo sapiens mutL (E. coli) homolog 3 (MLH3), mRNA. /FEA=mRNA /GEN=MLH3 /PROD=mutL (E. coli) homolog 3 /DB_XREF=gi:7657336 /UG=Hs.279843 mutL (E. coli) homolog 3 /FL=gb:AF195657.1 gb:NM_014381.1 </td> <td> NM_014381 </td> <td> mutL homolog 3 </td> <td> MLH3 </td> <td> 27030 </td> <td> NM_001040108 /// NM_014381 /// XM_005267531 /// XM_005267532 /// XM_005267533 /// XM_005267534 /// XM_006720116 /// XM_006720117 /// XR_245681 /// XR_429311 /// XR_429312 </td> <td> 0006200 // ATP catabolic process // not recorded /// 0006281 // DNA repair // inferred from electronic annotation /// 0006298 // mismatch repair // non-traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007130 // synaptonemal complex assembly // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // non-traceable author statement /// 0007140 // male meiosis // inferred from electronic annotation /// 0007144 // female meiosis I // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation </td> <td> 0000793 // condensed chromosome // inferred from electronic annotation /// 0000795 // synaptonemal complex // not recorded /// 0001673 // male germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005712 // chiasma // not recorded /// 0032300 // mismatch repair complex // not recorded /// 0032390 // MutLbeta complex // </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0003696 // satellite DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // not recorded /// 0019237 // centromeric DNA binding // inferred from electronic annotation /// 0030983 // mismatched DNA binding // inferred from electronic annotation /// 0032407 // MutSalpha complex binding // </td> <td> 22.68 </td> <td> 26.74 </td> <td> 2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200774_at </td> <td> 200774_at </td> <td> BE963765 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE963765 /FEA=EST /DB_XREF=gi:11767182 /DB_XREF=est:601657412R1 /CLONE=IMAGE:3875738 /UG=Hs.76666 C9orf10 protein /FL=gb:AF214737.1 gb:NM_014612.1 </td> <td> BE963765 </td> <td> family with sequence similarity 120A </td> <td> FAM120A </td> <td> 23196 </td> <td> NM_001286722 /// NM_001286723 /// NM_001286724 /// NM_014612 /// XM_005251842 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 91.90 </td> <td> 845.17 </td> <td> 2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 203874_s_at </td> <td> 203874_s_at </td> <td> NM_003069 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003069.1 /DEF=Homo sapiens SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 (SMARCA1), mRNA.  /FEA=mRNA /GEN=SMARCA1 /PROD=SWISNF related, matrix associated, actindependent regulator of chromatin, subfamily a, member 1 /DB_XREF=gi:4507066 /UG=Hs.152292 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 /FL=gb:M88163.1 gb:NM_003069.1 </td> <td> NM_003069 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 </td> <td> SMARCA1 </td> <td> 6594 </td> <td> NM_001282874 /// NM_001282875 /// NM_003069 /// NM_139035 /// XM_005262461 /// XM_005262462 /// XM_006724782 </td> <td> 0000733 // DNA strand renaturation // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007420 // brain development // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 2000177 // regulation of neural precursor cell proliferation // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0016589 // NURF complex // inferred from direct assay /// 0090537 // CERF complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0031491 // nucleosome binding // inferred from electronic annotation /// 0036310 // annealing helicase activity // inferred from direct assay /// 0070615 // nucleosome-dependent ATPase activity // inferred from direct assay </td> <td> 24.50 </td> <td> 93.47 </td> <td> 2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202621_at </td> <td> 202621_at </td> <td> NM_001571 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001571.1 /DEF=Homo sapiens interferon regulatory factor 3 (IRF3), mRNA. /FEA=mRNA /GEN=IRF3 /PROD=interferon regulatory factor 3 /DB_XREF=gi:4504724 /UG=Hs.75254 interferon regulatory factor 3 /FL=gb:NM_001571.1 </td> <td> NM_001571 </td> <td> interferon regulatory factor 3 </td> <td> IRF3 </td> <td> 3661 </td> <td> NM_001197122 /// NM_001197123 /// NM_001197124 /// NM_001197125 /// NM_001197126 /// NM_001197127 /// NM_001197128 /// NM_001571 /// NR_045568 /// XM_006723197 /// XM_006723198 /// XM_006723199 /// XM_006723200 /// XM_006723201 /// XM_006723202 /// XR_430199 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // traceable author statement /// 0009617 // response to bacterium // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032727 // positive regulation of interferon-alpha production // inferred from sequence or structural similarity /// 0032728 // positive regulation of interferon-beta production // inferred from sequence or structural similarity /// 0032728 // positive regulation of interferon-beta production // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0039530 // MDA-5 signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045351 // type I interferon biosynthetic process // inferred from electronic annotation /// 0045358 // negative regulation of interferon-beta biosynthetic process // inferred from electronic annotation /// 0050689 // negative regulation of defense response to virus by host // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0060340 // positive regulation of type I interferon-mediated signaling pathway // inferred from electronic annotation /// 0071359 // cellular response to dsRNA // inferred from electronic annotation /// 0071888 // macrophage apoptotic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000975 // regulatory region DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation </td> <td> 31.23 </td> <td> 99.16 </td> <td> 2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 215210_s_at </td> <td> 215210_s_at </td> <td> S72422 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:S72422.1 /DEF=E2k=alpha-ketoglutarate dehydrogenase complex dihydrolipoyl succinyltransferase human, fetal brain, mRNA, 2987 nt.  /FEA=mRNA /GEN=E2k /PROD=alpha-ketoglutarate dehydrogenase complexdihydrolipoyl succinyltransferase /DB_XREF=gi:632883 /UG=Hs.296348 E2k </td> <td> S72422 </td> <td> dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) </td> <td> DLST </td> <td> 1743 </td> <td> NM_001244883 /// NM_001933 /// NR_033814 /// NR_045209 </td> <td> 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006554 // lysine catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0033512 // L-lysine catabolic process to acetyl-CoA via saccharopine // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005947 // mitochondrial alpha-ketoglutarate dehydrogenase complex // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045252 // oxoglutarate dehydrogenase complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004149 // dihydrolipoyllysine-residue succinyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation </td> <td> 32.92 </td> <td> 154.81 </td> <td> 2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 214895_s_at </td> <td> 214895_s_at </td> <td> AU135154 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU135154 /FEA=EST /DB_XREF=gi:10995693 /DB_XREF=est:AU135154 /CLONE=PLACE1001348 /UG=Hs.172028 a disintegrin and metalloproteinase domain 10 </td> <td> AU135154 </td> <td> ADAM metallopeptidase domain 10 </td> <td> ADAM10 </td> <td> 102 </td> <td> NM_001110 /// XM_005254117 </td> <td> 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006509 // membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0007162 // negative regulation of cell adhesion // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from sequence or structural similarity /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0007267 // cell-cell signaling // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0010820 // positive regulation of T cell chemotaxis // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030574 // collagen catabolic process // traceable author statement /// 0034612 // response to tumor necrosis factor // inferred from direct assay /// 0042117 // monocyte activation // inferred from mutant phenotype /// 0051088 // PMA-inducible membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0051089 // constitutive protein ectodomain proteolysis // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005798 // Golgi-associated vesicle // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097038 // perinuclear endoplasmic reticulum // inferred from direct assay /// 0097197 // tetraspanin-enriched microdomain // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from sequence or structural similarity /// 0004222 // metalloendopeptidase activity // inferred from mutant phenotype /// 0004222 // metalloendopeptidase activity // non-traceable author statement /// 0005102 // receptor binding // non-traceable author statement /// 0005178 // integrin binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from direct assay /// 0008237 // metallopeptidase activity // inferred from mutant phenotype /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -28.92 </td> <td> 102.74 </td> <td> -2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 210951_x_at </td> <td> 210951_x_at </td> <td> AF125393 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF125393.1 /DEF=Homo sapiens Rab27 isoform mRNA, complete cds. /FEA=mRNA /PROD=Rab27 isoform /DB_XREF=gi:5410356 /UG=Hs.50477 RAB27A, member RAS oncogene family /FL=gb:AF125393.1 </td> <td> AF125393 </td> <td> RAB27A, member RAS oncogene family </td> <td> RAB27A </td> <td> 5873 </td> <td> NM_004580 /// NM_183234 /// NM_183235 /// NM_183236 /// XM_005254576 /// XM_005254577 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from mutant phenotype /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0032402 // melanosome transport // inferred from electronic annotation /// 0043316 // cytotoxic T cell degranulation // inferred from electronic annotation /// 0043320 // natural killer cell degranulation // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045921 // positive regulation of exocytosis // inferred from mutant phenotype /// 0051875 // pigment granule localization // inferred from electronic annotation /// 0051904 // pigment granule transport // inferred from electronic annotation /// 0071985 // multivesicular body sorting pathway // inferred from mutant phenotype </td> <td> 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0032585 // multivesicular body membrane // inferred from direct assay /// 0042470 // melanosome // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070382 // exocytic vesicle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from sequence or structural similarity /// 0019003 // GDP binding // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031489 // myosin V binding // inferred from electronic annotation </td> <td> -38.33 </td> <td> 144.39 </td> <td> -2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 203316_s_at </td> <td> 203316_s_at </td> <td> NM_003094 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003094.1 /DEF=Homo sapiens small nuclear ribonucleoprotein polypeptide E (SNRPE), mRNA.  /FEA=mRNA /GEN=SNRPE /PROD=small nuclear ribonucleoprotein polypeptide E /DB_XREF=gi:4507128 /UG=Hs.1066 small nuclear ribonucleoprotein polypeptide E /FL=gb:BC002639.1 gb:M37716.1 gb:NM_003094.1 </td> <td> NM_003094 </td> <td> small nuclear ribonucleoprotein polypeptide E </td> <td> SNRPE </td> <td> 6635 </td> <td> NM_003094 </td> <td> 0000245 // spliceosomal complex assembly // non-traceable author statement /// 0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008334 // histone mRNA metabolic process // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement /// 0042633 // hair cycle // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005683 // U7 snRNP // inferred from direct assay /// 0005685 // U1 snRNP // inferred from direct assay /// 0005687 // U4 snRNP // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // non-traceable author statement /// 0034709 // methylosome // inferred from direct assay /// 0034715 // pICln-Sm protein complex // inferred from direct assay /// 0034719 // SMN-Sm protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 111.40 </td> <td> 810.08 </td> <td> 2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200681_at </td> <td> 200681_at </td> <td> NM_006708 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006708.1 /DEF=Homo sapiens glyoxalase I (GLO1), mRNA. /FEA=mRNA /GEN=GLO1 /PROD=glyoxalase I /DB_XREF=gi:5729841 /UG=Hs.75207 glyoxalase I /FL=gb:BC001741.1 gb:L07837.1 gb:NM_006708.1 </td> <td> NM_006708 </td> <td> glyoxalase I </td> <td> GLO1 </td> <td> 2739 </td> <td> NM_006708 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009438 // methylglyoxal metabolic process // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004462 // lactoylglutathione lyase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 107.87 </td> <td> 790.84 </td> <td> 2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 203606_at </td> <td> 203606_at </td> <td> NM_004553 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004553.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) Fe-S protein 6 (13kD) (NADH-coenzyme Q reductase) (NDUFS6), mRNA.  /FEA=mRNA /GEN=NDUFS6 /PROD=NADH dehydrogenase (ubiquinone) Fe-S protein 6(13kD) (NADH-coenzyme Q reductase) /DB_XREF=gi:4758791 /UG=Hs.49767 NADH dehydrogenase (ubiquinone) Fe-S protein 6 (13kD) (NADH-coenzyme Q reductase) /FL=gb:AF044959.1 gb:NM_004553.1 </td> <td> NM_004553 </td> <td> NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase) </td> <td> NDUFS6 </td> <td> 4726 </td> <td> NM_004553 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006936 // muscle contraction // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061458 // reproductive system development // inferred from electronic annotation /// 0070584 // mitochondrion morphogenesis // inferred from electronic annotation /// 0072358 // cardiovascular system development // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0009055 // electron carrier activity // non-traceable author statement </td> <td> 79.50 </td> <td> 334.68 </td> <td> 2.26 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 200656_s_at </td> <td> 200656_s_at </td> <td> NM_000918 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000918.1 /DEF=Homo sapiens procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), beta polypeptide (protein disulfide isomerase; thyroid hormone binding protein p55) (P4HB), mRNA.  /FEA=mRNA /GEN=P4HB /PROD=procollagen-proline, 2-oxoglutarate4-dioxygenase (proline 4-hydroxylase), beta polypeptide(protein disulfide isomerase; thyroid hormone bindingprotein p55) /DB_XREF=gi:4505566 /UG=Hs.75655 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), beta polypeptide (protein disulfide isomerase; thyroid hormone binding protein p55) /FL=gb:J02783.1 gb:NM_000918.1 </td> <td> NM_000918 </td> <td> prolyl 4-hydroxylase, beta polypeptide </td> <td> P4HB </td> <td> 5034 </td> <td> NM_000918 </td> <td> 0006457 // protein folding // not recorded /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0018401 // peptidyl-proline hydroxylation to 4-hydroxy-L-proline // inferred from direct assay /// 0030198 // extracellular matrix organization // traceable author statement /// 0034976 // response to endoplasmic reticulum stress // inferred from mutant phenotype /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from mutant phenotype /// 1902175 // regulation of intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016222 // procollagen-proline 4-dioxygenase complex // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003756 // protein disulfide isomerase activity // not recorded /// 0004656 // procollagen-proline 4-dioxygenase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -93.57 </td> <td> 765.29 </td> <td> -2.25 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202998_s_at </td> <td> 202998_s_at </td> <td> NM_002318 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002318.1 /DEF=Homo sapiens lysyl oxidase-like 2 (LOXL2), mRNA. /FEA=mRNA /GEN=LOXL2 /PROD=lysyl oxidase-like 2 /DB_XREF=gi:4505010 /UG=Hs.83354 lysyl oxidase-like 2 /FL=gb:BC000594.1 gb:U89942.1 gb:NM_002318.1 gb:AF117949.1 </td> <td> NM_002318 </td> <td> lysyl oxidase-like 2 </td> <td> LOXL2 </td> <td> 4017 </td> <td> NM_002318 </td> <td> 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001837 // epithelial to mesenchymal transition // inferred from direct assay /// 0001935 // endothelial cell proliferation // inferred from mutant phenotype /// 0002040 // sprouting angiogenesis // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007568 // aging // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016570 // histone modification // inferred from direct assay /// 0018277 // protein deamination // inferred from direct assay /// 0030199 // collagen fibril organization // inferred from mutant phenotype /// 0032332 // positive regulation of chondrocyte differentiation // inferred from sequence or structural similarity /// 0043542 // endothelial cell migration // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0046688 // response to copper ion // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0004720 // protein-lysine 6-oxidase activity // inferred from direct assay /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016641 // oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor // inferred from electronic annotation /// 0035064 // methylated histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070492 // oligosaccharide binding // inferred from direct assay </td> <td> -270.05 </td> <td> 1161.40 </td> <td> -2.25 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208777_s_at </td> <td> 208777_s_at </td> <td> AF001212 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF001212.1 /DEF=Homo sapiens 26S proteasome subunit 9 mRNA, complete cds. /FEA=mRNA /PROD=26S proteasome subunit 9 /DB_XREF=gi:2150045 /UG=Hs.90744 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 /FL=gb:BC000437.1 gb:BC004430.1 gb:AB003102.1 gb:AF001212.1 gb:NM_002815.1 </td> <td> AF001212 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 </td> <td> PSMD11 </td> <td> 5717 </td> <td> NM_001270482 /// NM_002815 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043248 // proteasome assembly // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0048863 // stem cell differentiation // inferred from mutant phenotype /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022624 // proteasome accessory complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 87.70 </td> <td> 523.90 </td> <td> 2.25 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201443_s_at </td> <td> 201443_s_at </td> <td> AF248966 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF248966.1 /DEF=Homo sapiens HT028 mRNA, complete cds. /FEA=mRNA /PROD=HT028 /DB_XREF=gi:12005668 /UG=Hs.183434 ATPase, H+ transporting, lysosomal (vacuolar proton pump) membrane sector associated protein M8-9 /FL=gb:AF248966.1 gb:NM_005765.1 </td> <td> AF248966 </td> <td> ATPase, H+ transporting, lysosomal accessory protein 2 </td> <td> ATP6AP2 </td> <td> 10159 </td> <td> NM_005765 </td> <td> 0002003 // angiotensin maturation // inferred from direct assay /// 0002003 // angiotensin maturation // traceable author statement /// 0006508 // proteolysis // not recorded /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0021903 // rostrocaudal neural tube patterning // inferred from mutant phenotype /// 0030177 // positive regulation of Wnt signaling pathway // inferred from mutant phenotype /// 0032914 // positive regulation of transforming growth factor beta1 production // inferred from direct assay /// 0043408 // regulation of MAPK cascade // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048069 // eye pigmentation // inferred from mutant phenotype /// 0060323 // head morphogenesis // inferred from mutant phenotype </td> <td> 0005886 // plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004190 // aspartic-type endopeptidase activity // not recorded /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation </td> <td> 86.70 </td> <td> 531.25 </td> <td> 2.25 </td> <td> 0.06 </td> <td> 0.09 </td> <td> -4.53 </td> </tr>
  <tr> <td> 211955_at </td> <td> 211955_at </td> <td> NM_002271 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_002271.1 /DEF=Homo sapiens karyopherin (importin) beta 3 (KPNB3), mRNA. /FEA=CDS /GEN=KPNB3 /PROD=karyopherin (importin) beta 3 /DB_XREF=gi:4504908 /UG=Hs.113503 karyopherin (importin) beta 3 /FL=gb:U72761.1 gb:NM_002271.1 </td> <td> NM_002271 </td> <td> importin 5 </td> <td> IPO5 </td> <td> 3843 </td> <td> NM_002271 /// XM_005254049 /// XM_005254052 /// XM_005254053 </td> <td> 0006607 // NLS-bearing protein import into nucleus // inferred from sequence or structural similarity /// 0006610 // ribosomal protein import into nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042307 // positive regulation of protein import into nucleus // inferred from sequence or structural similarity /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0071230 // cellular response to amino acid stimulus // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005643 // nuclear pore // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005095 // GTPase inhibitor activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -71.25 </td> <td> 282.38 </td> <td> -2.25 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 211066_x_at </td> <td> 211066_x_at </td> <td> BC006439 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006439.1 /DEF=Homo sapiens, Similar to protocadherin gamma subfamily A, 5, clone MGC:13163, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to protocadherin gamma subfamily A, 5 /DB_XREF=gi:13623638 /FL=gb:BC006439.1 </td> <td> BC006439 </td> <td> protocadherin gamma subfamily A, 1 /// protocadherin gamma subfamily A, 10 /// protocadherin gamma subfamily A, 11 /// protocadherin gamma subfamily A, 12 /// protocadherin gamma subfamily A, 2 /// protocadherin gamma subfamily A, 3 /// protocadherin gamma subfamily A, 4 /// protocadherin gamma subfamily A, 5 /// protocadherin gamma subfamily A, 6 /// protocadherin gamma subfamily A, 7 /// protocadherin gamma subfamily A, 8 /// protocadherin gamma subfamily A, 9 /// protocadherin gamma subfamily B, 1 /// protocadherin gamma subfamily B, 2 /// protocadherin gamma subfamily B, 3 /// protocadherin gamma subfamily B, 4 /// protocadherin gamma subfamily B, 5 /// protocadherin gamma subfamily B, 6 /// protocadherin gamma subfamily B, 7 /// protocadherin gamma subfamily C, 3 /// protocadherin gamma subfamily C, 4 /// protocadherin gamma subfamily C, 5 </td> <td> PCDHGA1 /// PCDHGA10 /// PCDHGA11 /// PCDHGA12 /// PCDHGA2 /// PCDHGA3 /// PCDHGA4 /// PCDHGA5 /// PCDHGA6 /// PCDHGA7 /// PCDHGA8 /// PCDHGA9 /// PCDHGB1 /// PCDHGB2 /// PCDHGB3 /// PCDHGB4 /// PCDHGB5 /// PCDHGB6 /// PCDHGB7 /// PCDHGC3 /// PCDHGC4 /// PCDHGC5 </td> <td> 5098 /// 8641 /// 9708 /// 26025 /// 56097 /// 56098 /// 56099 /// 56100 /// 56101 /// 56102 /// 56103 /// 56104 /// 56105 /// 56106 /// 56107 /// 56108 /// 56109 /// 56110 /// 56111 /// 56112 /// 56113 /// 56114 </td> <td> NM_002588 /// NM_003735 /// NM_003736 /// NM_014004 /// NM_018912 /// NM_018913 /// NM_018914 /// NM_018915 /// NM_018916 /// NM_018917 /// NM_018918 /// NM_018919 /// NM_018920 /// NM_018921 /// NM_018922 /// NM_018923 /// NM_018924 /// NM_018925 /// NM_018926 /// NM_018927 /// NM_018928 /// NM_018929 /// NM_031993 /// NM_032009 /// NM_032011 /// NM_032053 /// NM_032054 /// NM_032086 /// NM_032087 /// NM_032088 /// NM_032089 /// NM_032090 /// NM_032091 /// NM_032092 /// NM_032094 /// NM_032095 /// NM_032096 /// NM_032097 /// NM_032098 /// NM_032099 /// NM_032100 /// NM_032101 /// NM_032402 /// NM_032403 /// NM_032406 /// NM_032407 </td> <td> 0007155 // cell adhesion // traceable author statement /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -83.60 </td> <td> 385.07 </td> <td> -2.25 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208152_s_at </td> <td> 208152_s_at </td> <td> NM_004728 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004728.1 /DEF=Homo sapiens DEADH (Asp-Glu-Ala-AspHis) box polypeptide 21 (DDX21), mRNA.  /FEA=mRNA /GEN=DDX21 /PROD=DEADH (Asp-Glu-Ala-AspHis) box polypeptide 21 /DB_XREF=gi:13787208 /FL=gb:NM_004728.1 </td> <td> NM_004728 </td> <td> DEAD (Asp-Glu-Ala-Asp) box helicase 21 </td> <td> DDX21 </td> <td> 9188 </td> <td> NM_001256910 /// NM_004728 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006200 // ATP catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -173.13 </td> <td> 1030.19 </td> <td> -2.25 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 213084_x_at </td> <td> 213084_x_at </td> <td> BF125158 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF125158 /FEA=EST /DB_XREF=gi:10964198 /DB_XREF=est:601762392F1 /CLONE=IMAGE:4025158 /UG=Hs.194657 cadherin 1, type 1, E-cadherin (epithelial) </td> <td> BF125158 </td> <td> ribosomal protein L23a /// small nucleolar RNA, C/D box 42A </td> <td> RPL23A /// SNORD42A </td> <td> 6147 /// 26809 </td> <td> NM_000984 /// NR_000014 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031932 // TORC2 complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1168.40 </td> <td> 5182.32 </td> <td> -2.25 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208617_s_at </td> <td> 208617_s_at </td> <td> AF208850 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF208850.1 /DEF=Homo sapiens BM-008 mRNA, complete cds. /FEA=mRNA /PROD=BM-008 /DB_XREF=gi:7582287 /UG=Hs.82911 protein tyrosine phosphatase type IVA, member 2 /FL=gb:U48297.1 gb:NM_003479.1 gb:AF208850.1 </td> <td> AF208850 </td> <td> protein tyrosine phosphatase type IVA, member 2 </td> <td> PTP4A2 </td> <td> 8073 </td> <td> NM_001195100 /// NM_001195101 /// NM_003479 /// NM_080391 /// NM_080392 /// XM_005271229 /// XM_005271230 /// XM_005271231 /// XM_005271232 /// XM_006710927 /// XM_006710928 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004727 // prenylated protein tyrosine phosphatase activity // traceable author statement /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> 125.85 </td> <td> 432.25 </td> <td> 2.25 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 213394_at </td> <td> 213394_at </td> <td> AI674759 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI674759 /FEA=EST /DB_XREF=gi:4875239 /DB_XREF=est:wd20b03.x1 /CLONE=IMAGE:2328653 /UG=Hs.259729 KIAA0596 protein </td> <td> AI674759 </td> <td> mitogen-activated protein kinase binding protein 1 </td> <td> MAPKBP1 </td> <td> 23005 </td> <td> NM_001128608 /// NM_001265611 /// NM_014994 /// NR_049761 /// NR_049762 /// XM_006720438 /// XM_006720439 </td> <td> 0007256 // activation of JNKK activity // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td>  </td> <td> 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation </td> <td> -74.20 </td> <td> 115.75 </td> <td> -2.25 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202960_s_at </td> <td> 202960_s_at </td> <td> NM_000255 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000255.1 /DEF=Homo sapiens methylmalonyl Coenzyme A mutase (MUT), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=MUT /PROD=methylmalonyl Coenzyme A mutase precursor /DB_XREF=gi:4557766 /UG=Hs.155212 methylmalonyl Coenzyme A mutase /FL=gb:M65131.1 gb:NM_000255.1 </td> <td> NM_000255 </td> <td> methylmalonyl CoA mutase </td> <td> MUT </td> <td> 4594 </td> <td> NM_000255 /// XM_005249143 </td> <td> 0006635 // fatty acid beta-oxidation // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009235 // cobalamin metabolic process // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0019626 // short-chain fatty acid catabolic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050667 // homocysteine metabolic process // inferred from direct assay </td> <td> 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004494 // methylmalonyl-CoA mutase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016866 // intramolecular transferase activity // inferred from electronic annotation /// 0031419 // cobalamin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0072341 // modified amino acid binding // inferred from direct assay </td> <td> 39.70 </td> <td> 106.20 </td> <td> 2.25 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202298_at </td> <td> 202298_at </td> <td> NM_004541 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004541.2 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 (7.5kD, MWFE) (NDUFA1), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=NDUFA1 /PROD=NADH dehydrogenase (ubiquinone) 1 alphasubcomplex, 1 /DB_XREF=gi:13699820 /UG=Hs.74823 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 (7.5kD, MWFE) /FL=gb:BC000266.1 gb:NM_004541.2 gb:U54993.1 </td> <td> NM_004541 </td> <td> NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa </td> <td> NDUFA1 </td> <td> 4694 </td> <td> NM_004541 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> 87.48 </td> <td> 518.49 </td> <td> 2.25 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201168_x_at </td> <td> 201168_x_at </td> <td> NM_004309 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004309.1 /DEF=Homo sapiens Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA), mRNA.  /FEA=mRNA /GEN=ARHGDIA /PROD=Rho GDP dissociation inhibitor (GDI) alpha /DB_XREF=gi:4757767 /UG=Hs.159161 Rho GDP dissociation inhibitor (GDI) alpha /FL=gb:D13989.1 gb:M97579.1 gb:NM_004309.1 </td> <td> NM_004309 </td> <td> Rho GDP dissociation inhibitor (GDI) alpha </td> <td> ARHGDIA </td> <td> 396 </td> <td> NM_001185077 /// NM_001185078 /// NM_004309 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0050790 // regulation of catalytic activity // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0071526 // semaphorin-plexin signaling pathway // inferred from sequence or structural similarity </td> <td> 0001772 // immunological synapse // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005094 // Rho GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 118.95 </td> <td> 501.43 </td> <td> 2.24 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202232_s_at </td> <td> 202232_s_at </td> <td> NM_006360 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006360.1 /DEF=Homo sapiens dendritic cell protein (GA17), mRNA. /FEA=mRNA /GEN=GA17 /PROD=dendritic cell protein /DB_XREF=gi:5453653 /UG=Hs.69469 dendritic cell protein /FL=gb:AF277183.1 gb:AF064603.1 gb:NM_006360.1 </td> <td> NM_006360 </td> <td> eukaryotic translation initiation factor 3, subunit M </td> <td> EIF3M </td> <td> 10480 </td> <td> NM_006360 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0002183 // cytoplasmic translational initiation // not recorded /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006446 // regulation of translational initiation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation </td> <td> 0003743 // translation initiation factor activity // inferred by curator /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 62.08 </td> <td> 312.14 </td> <td> 2.24 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 214710_s_at </td> <td> 214710_s_at </td> <td> BE407516 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE407516 /FEA=EST /DB_XREF=gi:9343966 /DB_XREF=est:601300355F1 /CLONE=IMAGE:3630517 /UG=Hs.23960 cyclin B1 </td> <td> BE407516 </td> <td> cyclin B1 </td> <td> CCNB1 </td> <td> 891 </td> <td> NM_031966 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0007080 // mitotic metaphase plate congression // inferred from mutant phenotype /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031442 // positive regulation of mRNA 3'-end processing // inferred from electronic annotation /// 0033129 // positive regulation of histone phosphorylation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043148 // mitotic spindle stabilization // inferred from mutant phenotype /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0046680 // response to DDT // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051726 // regulation of cell cycle // traceable author statement /// 0051987 // positive regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060623 // regulation of chromosome condensation // inferred from electronic annotation /// 0071174 // mitotic spindle checkpoint // inferred from mutant phenotype /// 0071283 // cellular response to iron(III) ion // inferred from electronic annotation /// 0071398 // cellular response to fatty acid // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0000942 // condensed nuclear chromosome outer kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005113 // patched binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> 62.77 </td> <td> 251.79 </td> <td> 2.24 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 210915_x_at </td> <td> 210915_x_at </td> <td> M15564 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M15564.1 /DEF=Human T-cell receptor rearranged beta-chain V-region (V-D-J) mRNA, complete cds.  /FEA=mRNA /GEN=TCRB /DB_XREF=gi:339011 /UG=Hs.303157 T cell receptor beta locus /FL=gb:M15564.1 </td> <td> M15564 </td> <td> T cell receptor beta constant 1 </td> <td> TRBC1 </td> <td> 28639 </td> <td>  </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0002230 // positive regulation of defense response to virus by host // inferred from sequence or structural similarity /// 0002230 // positive regulation of defense response to virus by host // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from direct assay /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // non-traceable author statement /// 0002827 // positive regulation of T-helper 1 type immune response // traceable author statement /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0010535 // positive regulation of activation of JAK2 kinase activity // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0032693 // negative regulation of interleukin-10 production // inferred from mutant phenotype /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // traceable author statement /// 0032733 // positive regulation of interleukin-10 production // inferred from direct assay /// 0032733 // positive regulation of interleukin-10 production // traceable author statement /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0032740 // positive regulation of interleukin-17 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0032816 // positive regulation of natural killer cell activation // inferred by curator /// 0032819 // positive regulation of natural killer cell proliferation // inferred from direct assay /// 0034105 // positive regulation of tissue remodeling // inferred by curator /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042104 // positive regulation of activated T cell proliferation // inferred from direct assay /// 0042346 // positive regulation of NF-kappaB import into nucleus // traceable author statement /// 0042510 // regulation of tyrosine phosphorylation of Stat1 protein // inferred from direct assay /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042520 // positive regulation of tyrosine phosphorylation of Stat4 protein // inferred from direct assay /// 0042523 // positive regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0043382 // positive regulation of memory T cell differentiation // inferred from sequence or structural similarity /// 0043382 // positive regulation of memory T cell differentiation // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048771 // tissue remodeling // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0050776 // regulation of immune response // traceable author statement /// 0050829 // defense response to Gram-negative bacterium // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051135 // positive regulation of NK T cell activation // inferred by curator /// 0051135 // positive regulation of NK T cell activation // inferred from direct assay /// 0051142 // positive regulation of NK T cell proliferation // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from electronic annotation /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from sequence or structural similarity /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from electronic annotation /// 2000330 // positive regulation of T-helper 17 cell lineage commitment // inferred from sequence or structural similarity /// 2000330 // positive regulation of T-helper 17 cell lineage commitment // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070743 // interleukin-23 complex // inferred from direct assay </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0045519 // interleukin-23 receptor binding // inferred from direct assay /// 0045519 // interleukin-23 receptor binding // inferred from electronic annotation </td> <td> 34.07 </td> <td> 92.99 </td> <td> 2.24 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 201305_x_at </td> <td> 201305_x_at </td> <td> AV712577 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV712577 /FEA=EST /DB_XREF=gi:10731883 /DB_XREF=est:AV712577 /CLONE=DCAAUH03 /UG=Hs.84264 acidic protein rich in leucines /FL=gb:U70439.1 gb:NM_006401.1 </td> <td> AV712577 </td> <td> acidic (leucine-rich) nuclear phosphoprotein 32 family, member B </td> <td> ANP32B </td> <td> 10541 </td> <td> NM_006401 </td> <td> 0006334 // nucleosome assembly // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0045596 // negative regulation of cell differentiation // inferred from direct assay /// 0046827 // positive regulation of protein export from nucleus // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0042393 // histone binding // inferred from direct assay /// 0070063 // RNA polymerase binding // inferred from direct assay </td> <td> 60.60 </td> <td> 252.93 </td> <td> 2.24 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 208880_s_at </td> <td> 208880_s_at </td> <td> AB019219 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB019219.1 /DEF=Homo sapiens mRNA, complete cds, similar to yeast pre-mRNA splicing factors, Prp1Zer1 and Prp6.  /FEA=mRNA /DB_XREF=gi:4164165 /UG=Hs.31334 putative mitochondrial outer membrane protein import receptor /FL=gb:BC001666.1 gb:AF026031.1 gb:AB019219.1 gb:NM_012469.1 gb:AF221842.1 </td> <td> AB019219 </td> <td> pre-mRNA processing factor 6 </td> <td> PRPF6 </td> <td> 24148 </td> <td> NM_012469 /// XM_006723769 </td> <td> 0000244 // spliceosomal tri-snRNP complex assembly // inferred by curator /// 0000244 // spliceosomal tri-snRNP complex assembly // inferred from mutant phenotype /// 0000245 // spliceosomal complex assembly // non-traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // non-traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006403 // RNA localization // inferred from mutant phenotype /// 0008380 // RNA splicing // non-traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005682 // U5 snRNP // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0046540 // U4/U6 x U5 tri-snRNP complex // inferred from direct assay /// 0071001 // U4/U6 snRNP // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003713 // transcription coactivator activity // inferred from genetic interaction /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0043021 // ribonucleoprotein complex binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050681 // androgen receptor binding // inferred from physical interaction </td> <td> 27.45 </td> <td> 104.03 </td> <td> 2.24 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 202102_s_at </td> <td> 202102_s_at </td> <td> BF718610 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF718610 /FEA=EST /DB_XREF=gi:12019523 /DB_XREF=est:KEST81 /CLONE=S90413.NIH-116-R.ab1 /UG=Hs.278675 bromodomain-containing 4 /FL=gb:NM_014299.1 </td> <td> BF718610 </td> <td> bromodomain containing 4 </td> <td> BRD4 </td> <td> 23476 </td> <td> NM_014299 /// NM_058243 </td> <td> 0000083 // regulation of transcription involved in G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0001833 // inner cell mass cell proliferation // inferred from electronic annotation /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from mutant phenotype /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0010971 // positive regulation of G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032968 // positive regulation of transcription elongation from RNA polymerase II promoter // inferred from direct assay /// 0032968 // positive regulation of transcription elongation from RNA polymerase II promoter // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0043983 // histone H4-K12 acetylation // inferred from electronic annotation /// 0044154 // histone H3-K14 acetylation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050727 // regulation of inflammatory response // inferred from direct assay /// 1901407 // regulation of phosphorylation of RNA polymerase II C-terminal domain // inferred from direct assay /// 2000002 // negative regulation of DNA damage checkpoint // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0002039 // p53 binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0070577 // lysine-acetylated histone binding // inferred from direct assay </td> <td> -44.95 </td> <td> 271.25 </td> <td> -2.24 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 203012_x_at </td> <td> 203012_x_at </td> <td> NM_000984 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000984.1 /DEF=Homo sapiens ribosomal protein L23a (RPL23A), mRNA. /FEA=mRNA /GEN=RPL23A /PROD=ribosomal protein L23a /DB_XREF=gi:4506614 /UG=Hs.184776 ribosomal protein L23a /FL=gb:U37230.1 gb:NM_000984.1 </td> <td> NM_000984 </td> <td> ribosomal protein L23a </td> <td> RPL23A </td> <td> 6147 </td> <td> NM_000984 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031932 // TORC2 complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1199.85 </td> <td> 5015.75 </td> <td> -2.24 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.53 </td> </tr>
  <tr> <td> 218566_s_at </td> <td> 218566_s_at </td> <td> NM_012124 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012124.1 /DEF=Homo sapiens chord domain-containing protein 1 (CHP1), mRNA. /FEA=mRNA /GEN=CHP1 /PROD=chord domain-containing protein 1 /DB_XREF=gi:6912303 /UG=Hs.22857 cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 /FL=gb:AF192466.1 gb:NM_012124.1 </td> <td> NM_012124 </td> <td> cysteine and histidine-rich domain (CHORD) containing 1 </td> <td> CHORDC1 </td> <td> 26973 </td> <td> NM_001144073 /// NM_012124 /// XR_247194 /// XR_247195 </td> <td> 0006950 // response to stress // inferred from electronic annotation /// 0010824 // regulation of centrosome duplication // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // inferred from sequence or structural similarity /// 0080134 // regulation of response to stress // inferred from electronic annotation /// 1900034 // regulation of cellular response to heat // inferred from sequence or structural similarity /// 2000299 // negative regulation of Rho-dependent protein serine/threonine kinase activity // inferred from electronic annotation </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from physical interaction </td> <td> 40.23 </td> <td> 182.84 </td> <td> 2.24 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 209476_at </td> <td> 209476_at </td> <td> AL080080 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL080080.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564E1962 (from clone DKFZp564E1962); partial cds.  /FEA=mRNA /GEN=DKFZp564E1962 /PROD=hypothetical protein /DB_XREF=gi:5262491 /UG=Hs.24766 thioredoxin-related transmembrane protein /FL=gb:AB048246.1 </td> <td> AL080080 </td> <td> thioredoxin-related transmembrane protein 1 </td> <td> TMX1 </td> <td> 81542 </td> <td> NM_030755 </td> <td> 0006260 // DNA replication // non-traceable author statement /// 0006457 // protein folding // not recorded /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006950 // response to stress // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0034976 // response to endoplasmic reticulum stress // not recorded /// 0034976 // response to endoplasmic reticulum stress // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045321 // leukocyte activation // non-traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045927 // positive regulation of growth // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003756 // protein disulfide isomerase activity // not recorded /// 0015036 // disulfide oxidoreductase activity // inferred from direct assay /// 0030612 // arsenate reductase (thioredoxin) activity // non-traceable author statement </td> <td> 144.60 </td> <td> 352.50 </td> <td> 2.24 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212800_at </td> <td> 212800_at </td> <td> AI740832 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI740832 /FEA=EST /DB_XREF=gi:5109120 /DB_XREF=est:wg24g02.x1 /CLONE=IMAGE:2366066 /UG=Hs.12311 Homo sapiens clone 23570 mRNA sequence </td> <td> AI740832 </td> <td> syntaxin 6 </td> <td> STX6 </td> <td> 10228 </td> <td> NM_001286210 /// NM_005819 /// XM_005244824 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // not recorded /// 0006906 // vesicle fusion // inferred from physical interaction /// 0007032 // endosome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048193 // Golgi vesicle transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // not recorded /// 0030136 // clathrin-coated vesicle // traceable author statement /// 0031201 // SNARE complex // inferred from direct assay /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005484 // SNAP receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction </td> <td> -31.58 </td> <td> 78.26 </td> <td> -2.23 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 213166_x_at </td> <td> 213166_x_at </td> <td> BG332462 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG332462 /FEA=EST /DB_XREF=gi:13138900 /DB_XREF=est:602432837F1 /CLONE=IMAGE:4550505 /UG=Hs.3343 phosphoglycerate dehydrogenase </td> <td> BG332462 </td> <td> microRNA 4784 /// mitotic spindle organizing protein 2A /// mitotic spindle organizing protein 2B </td> <td> MIR4784 /// MZT2A /// MZT2B </td> <td> 80097 /// 653784 /// 100616378 </td> <td> NM_001085365 /// NM_025029 /// NR_039945 /// XM_005263741 /// XM_005263742 /// XM_005263792 /// XM_005263795 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008274 // gamma-tubulin ring complex // inferred from direct assay /// 0008274 // gamma-tubulin ring complex // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -44.93 </td> <td> 376.76 </td> <td> -2.23 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201647_s_at </td> <td> 201647_s_at </td> <td> NM_005506 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005506.1 /DEF=Homo sapiens CD36 antigen (collagen type I receptor, thrombospondin receptor)-like 2 (lysosomal integral membrane protein II) (CD36L2), mRNA.  /FEA=mRNA /GEN=CD36L2 /PROD=CD36 antigen (collagen type I receptor,thrombospondin receptor)-like 2 (lysosomal integralmembrane protein II) /DB_XREF=gi:5031630 /UG=Hs.323567 CD36 antigen (collagen type I receptor, thrombospondin receptor)-like 2 (lysosomal integral membrane protein II) /FL=gb:D12676.1 gb:NM_005506.1 </td> <td> NM_005506 </td> <td> scavenger receptor class B, member 2 </td> <td> SCARB2 </td> <td> 950 </td> <td> NM_001204255 /// NM_005506 </td> <td> 0006622 // protein targeting to lysosome // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation </td> <td> 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> -42.03 </td> <td> 138.31 </td> <td> -2.23 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 214263_x_at </td> <td> 214263_x_at </td> <td> AI192781 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI192781 /FEA=EST /DB_XREF=gi:3743990 /DB_XREF=est:qe67e09.x1 /CLONE=IMAGE:1744072 /UG=Hs.79402 polymerase (RNA) II (DNA directed) polypeptide C (33kD) </td> <td> AI192781 </td> <td> polymerase (RNA) II (DNA directed) polypeptide C, 33kDa </td> <td> POLR2C </td> <td> 5432 </td> <td> NM_002694 /// NM_032940 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay </td> <td> 0001055 // RNA polymerase II activity // not recorded /// 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> 38.52 </td> <td> 141.26 </td> <td> 2.23 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 208648_at </td> <td> 208648_at </td> <td> W60953 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W60953 /FEA=EST /DB_XREF=gi:1367731 /DB_XREF=est:zc98b12.s1 /CLONE=IMAGE:339167 /UG=Hs.106357 valosin-containing protein /FL=gb:AF100752.1 gb:NM_007126.2 </td> <td> W60953 </td> <td> valosin containing protein </td> <td> VCP </td> <td> 7415 </td> <td> NM_007126 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006281 // DNA repair // non-traceable author statement /// 0006302 // double-strand break repair // inferred from direct assay /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // non-traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // inferred from mutant phenotype /// 0019985 // translesion synthesis // inferred from mutant phenotype /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0030970 // retrograde protein transport, ER to cytosol // inferred from direct assay /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0045184 // establishment of protein localization // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0070842 // aggresome assembly // inferred from electronic annotation /// 1903006 // positive regulation of protein K63-linked deubiquitination // inferred from direct assay /// 1903007 // positive regulation of Lys63-specific deubiquitinase activity // inferred from direct assay </td> <td> 0000502 // proteasome complex // inferred from direct assay /// 0000836 // Hrd1p ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0035861 // site of double-strand break // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0009378 // four-way junction helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // traceable author statement /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0032403 // protein complex binding // inferred from electronic annotation /// 0035800 // deubiquitinase activator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 1990381 // ubiquitin-specific protease binding // inferred from physical interaction </td> <td> 50.55 </td> <td> 235.20 </td> <td> 2.23 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 217707_x_at </td> <td> 217707_x_at </td> <td> AI535683 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI535683 /FEA=EST /DB_XREF=gi:4449818 /DB_XREF=est:cong1.P11.A9 /UG=Hs.327729 ESTs </td> <td> AI535683 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 </td> <td> SMARCA2 </td> <td> 6595 </td> <td> NM_001289396 /// NM_001289397 /// NM_001289398 /// NM_001289399 /// NM_001289400 /// NM_003070 /// NM_139045 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006200 // ATP catabolic process // traceable author statement /// 0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0035887 // aortic smooth muscle cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from sequence or structural similarity /// 0071778 // WINAC complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0042393 // histone binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay </td> <td> 30.20 </td> <td> 94.85 </td> <td> 2.23 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 209341_s_at </td> <td> 209341_s_at </td> <td> AU153366 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU153366 /FEA=EST /DB_XREF=gi:11014887 /DB_XREF=est:AU153366 /CLONE=NT2RP3002988 /UG=Hs.226573 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta /FL=gb:AF031416.1 gb:AF080158.1 </td> <td> AU153366 </td> <td> inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta </td> <td> IKBKB </td> <td> 3551 </td> <td> NM_001190720 /// NM_001190721 /// NM_001190722 /// NM_001242778 /// NM_001556 /// NR_033818 /// NR_033819 /// NR_040009 /// XM_005273490 /// XM_005273491 /// XM_005273492 /// XM_005273493 /// XM_005273494 /// XM_005273495 /// XM_005273496 /// XM_005273498 /// XM_005273499 </td> <td> 0001782 // B cell homeostasis // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0007252 // I-kappaB phosphorylation // inferred from electronic annotation /// 0007252 // I-kappaB phosphorylation // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0010765 // positive regulation of sodium ion transport // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042501 // serine phosphorylation of STAT protein // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 2001259 // positive regulation of cation channel activity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008385 // IkappaB kinase complex // traceable author statement /// 0009898 // cytoplasmic side of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0045121 // membrane raft // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008384 // IkappaB kinase activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0097110 // scaffold protein binding // inferred from direct assay </td> <td> 55.10 </td> <td> 98.70 </td> <td> 2.23 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 218583_s_at </td> <td> 218583_s_at </td> <td> NM_020640 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020640.1 /DEF=Homo sapiens RP42 homolog (RP42), mRNA. /FEA=mRNA /GEN=RP42 /PROD=RP42 homolog /DB_XREF=gi:10190677 /UG=Hs.104613 RP42 homolog /FL=gb:NM_020640.1 gb:AF292100.2 </td> <td> NM_020640 </td> <td> DCN1, defective in cullin neddylation 1, domain containing 1 </td> <td> DCUN1D1 </td> <td> 54165 </td> <td> NM_020640 /// XM_005247539 /// XM_005247540 </td> <td>  </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -41.97 </td> <td> 140.49 </td> <td> -2.23 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 202467_s_at </td> <td> 202467_s_at </td> <td> NM_004236 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004236.1 /DEF=Homo sapiens thyroid receptor interacting protein 15 (TRIP15), mRNA.  /FEA=mRNA /GEN=TRIP15 /PROD=thyroid receptor interacting protein 15 /DB_XREF=gi:4759263 /UG=Hs.30212 thyroid receptor interacting protein 15 /FL=gb:AF084260.1 gb:NM_004236.1 gb:AF120268.1 gb:AF100762.1 </td> <td> NM_004236 </td> <td> COP9 signalosome subunit 2 </td> <td> COPS2 </td> <td> 9318 </td> <td> NM_001143887 /// NM_004236 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010388 // cullin deneddylation // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0008180 // COP9 signalosome // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -207.43 </td> <td> 556.61 </td> <td> -2.23 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201070_x_at </td> <td> 201070_x_at </td> <td> AI739389 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI739389 /FEA=EST /DB_XREF=gi:5101370 /DB_XREF=est:wi29f09.x1 /CLONE=IMAGE:2391689 /UG=Hs.13453 splicing factor 3b, subunit 1, 155kD /FL=gb:AF054284.1 gb:NM_012433.1 </td> <td> AI739389 </td> <td> splicing factor 3b, subunit 1, 155kDa </td> <td> SF3B1 </td> <td> 23451 </td> <td> NM_001005526 /// NM_012433 /// XM_005246428 /// XR_241300 /// XR_241301 /// XR_241302 </td> <td> 0000375 // RNA splicing, via transesterification reactions // non-traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // non-traceable author statement /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -59.28 </td> <td> 250.79 </td> <td> -2.23 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 217370_x_at </td> <td> 217370_x_at </td> <td> S75762 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:S75762.1 /DEF=FUS...CHOP human, myxoid liposarcoma specimens, mRNA Partial Mutant, 3 genes, 652 nt.  /FEA=mRNA /GEN=FUS-CHOP /PROD=FUS-CHOP fusion protein /DB_XREF=gi:861473 /UG=Hs.99969 fusion, derived from t(12;16) malignant liposarcoma </td> <td> S75762 </td> <td> FUS RNA binding protein </td> <td> FUS </td> <td> 2521 </td> <td> NM_001010850 /// NM_001170634 /// NM_001170937 /// NM_004960 /// NR_028388 /// XM_005255233 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001955 // blood vessel maturation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // traceable author statement /// 0006983 // ER overload response // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032757 // positive regulation of interleukin-8 production // inferred from mutant phenotype /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0034976 // response to endoplasmic reticulum stress // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from direct assay /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043620 // regulation of DNA-templated transcription in response to stress // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044324 // regulation of transcription involved in anterior/posterior axis specification // inferred from electronic annotation /// 0044324 // regulation of transcription involved in anterior/posterior axis specification // inferred from sequence or structural similarity /// 0045454 // cell redox homeostasis // inferred from direct assay /// 0045662 // negative regulation of myoblast differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0051209 // release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from direct assay /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 2000016 // negative regulation of determination of dorsal identity // inferred from direct assay /// 2000016 // negative regulation of determination of dorsal identity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -63.05 </td> <td> 227.08 </td> <td> -2.23 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 203466_at </td> <td> 203466_at </td> <td> NM_002437 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002437.1 /DEF=Homo sapiens MpV17 transgene, murine homolog, glomerulosclerosis (MPV17), mRNA.  /FEA=mRNA /GEN=MPV17 /PROD=MpV17 transgene, murine homolog,glomerulosclerosis /DB_XREF=gi:4505240 /UG=Hs.75659 MpV17 transgene, murine homolog, glomerulosclerosis /FL=gb:BC001115.1 gb:NM_002437.1 </td> <td> NM_002437 </td> <td> MpV17 mitochondrial inner membrane protein </td> <td> MPV17 </td> <td> 4358 </td> <td> NM_002437 /// XM_005264326 /// XM_005264327 /// XM_006712021 </td> <td> 0000002 // mitochondrial genome maintenance // inferred from mutant phenotype /// 0032836 // glomerular basement membrane development // inferred from sequence or structural similarity /// 0034614 // cellular response to reactive oxygen species // inferred from sequence or structural similarity /// 0042592 // homeostatic process // inferred from mutant phenotype /// 0048839 // inner ear development // inferred from sequence or structural similarity /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2000377 // regulation of reactive oxygen species metabolic process // inferred from sequence or structural similarity </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 28.67 </td> <td> 82.99 </td> <td> 2.23 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 205596_s_at </td> <td> 205596_s_at </td> <td> AY014180 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AY014180.1 /DEF=Homo sapiens E3 ubiquitin ligase Smurf2 mRNA, complete cds. /FEA=mRNA /PROD=E3 ubiquitin ligase Smurf2 /DB_XREF=gi:12408118 /UG=Hs.194477 E3 ubiquitin ligase SMURF2 /FL=gb:AF301463.1 gb:AF310676.1 gb:NM_022739.1 gb:AY014180.1 </td> <td> AY014180 </td> <td> SMAD specific E3 ubiquitin protein ligase 2 </td> <td> SMURF2 </td> <td> 64750 </td> <td> NM_022739 /// XM_005257585 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // not recorded /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // non-traceable author statement /// 0030509 // BMP signaling pathway // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030579 // ubiquitin-dependent SMAD protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // not recorded /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005160 // transforming growth factor beta receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from physical interaction </td> <td> 156.87 </td> <td> 748.79 </td> <td> 2.23 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 215813_s_at </td> <td> 215813_s_at </td> <td> S36219 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:S36219.1 /DEF=prostaglandin GH synthase {alternative splicing product} human, lung fibroblast, clone HCO-T9, mRNA, 2324 nt.  /FEA=mRNA /GEN=prostaglandin GH synthase, PGGHS /PROD=prostaglandin GH synthase /DB_XREF=gi:249623 /UG=Hs.88474 prostaglandin-endoperoxide synthase 1 (prostaglandin GH synthase and cyclooxygenase) </td> <td> S36219 </td> <td> prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) </td> <td> PTGS1 </td> <td> 5742 </td> <td> NM_000962 /// NM_001271164 /// NM_001271165 /// NM_001271166 /// NM_001271367 /// NM_001271368 /// NM_080591 /// XM_005252105 /// XM_006717192 </td> <td> 0001516 // prostaglandin biosynthetic process // inferred from sequence or structural similarity /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0019369 // arachidonic acid metabolic process // traceable author statement /// 0019371 // cyclooxygenase pathway // inferred from direct assay /// 0019371 // cyclooxygenase pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from sequence or structural similarity </td> <td> 0004601 // peroxidase activity // traceable author statement /// 0004666 // prostaglandin-endoperoxide synthase activity // inferred from direct assay /// 0004666 // prostaglandin-endoperoxide synthase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> 27.25 </td> <td> 141.72 </td> <td> 2.22 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 210978_s_at </td> <td> 210978_s_at </td> <td> BC002616 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002616.1 /DEF=Homo sapiens, transgelin 2, clone MGC:2989, mRNA, complete cds. /FEA=mRNA /PROD=transgelin 2 /DB_XREF=gi:12803566 /UG=Hs.75725 transgelin 2 /FL=gb:BC002616.1 </td> <td> BC002616 </td> <td> transgelin 2 </td> <td> TAGLN2 </td> <td> 8407 </td> <td> NM_001277223 /// NM_001277224 /// NM_003564 </td> <td> 0007517 // muscle organ development // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from direct assay </td> <td> 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -222.83 </td> <td> 1035.59 </td> <td> -2.22 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 204892_x_at </td> <td> 204892_x_at </td> <td> NM_001402 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001402.1 /DEF=Homo sapiens eukaryotic translation elongation factor 1 alpha 1 (EEF1A1), mRNA.  /FEA=mRNA /GEN=EEF1A1 /PROD=eukaryotic translation elongation factor 1 alpha1 /DB_XREF=gi:4503470 /UG=Hs.181165 eukaryotic translation elongation factor 1 alpha 1 /FL=gb:AF267861.1 gb:NM_001402.1 </td> <td> NM_001402 </td> <td> eukaryotic translation elongation factor 1 alpha 1 </td> <td> EEF1A1 </td> <td> 1915 </td> <td> NM_001402 /// NM_001403 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005853 // eukaryotic translation elongation factor 1 complex // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0019901 // protein kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1538.73 </td> <td> 5949.34 </td> <td> -2.22 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 218025_s_at </td> <td> 218025_s_at </td> <td> NM_006117 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006117.1 /DEF=Homo sapiens peroxisomal D3,D2-enoyl-CoA isomerase (PECI), mRNA. /FEA=mRNA /GEN=PECI /PROD=peroxisomal D3,D2-enoyl-CoA isomerase /DB_XREF=gi:5174624 /UG=Hs.15250 peroxisomal D3,D2-enoyl-CoA isomerase /FL=gb:AL136642.1 gb:BC002668.1 gb:AF069301.1 gb:AF153612.1 gb:NM_006117.1 gb:AF244138.1 </td> <td> NM_006117 </td> <td> enoyl-CoA delta isomerase 2 </td> <td> ECI2 </td> <td> 10455 </td> <td> NM_001166010 /// NM_006117 /// NM_206836 /// NR_028588 /// XM_006714957 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0009062 // fatty acid catabolic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // inferred from direct assay /// 0005782 // peroxisomal matrix // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004165 // dodecenoyl-CoA delta-isomerase activity // inferred from direct assay /// 0004165 // dodecenoyl-CoA delta-isomerase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation </td> <td> 48.55 </td> <td> 222.38 </td> <td> 2.22 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200675_at </td> <td> 200675_at </td> <td> NM_004356 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004356.1 /DEF=Homo sapiens CD81 antigen (target of antiproliferative antibody 1) (CD81), mRNA.  /FEA=mRNA /GEN=CD81 /PROD=CD81 antigen (target of antiproliferativeantibody 1) /DB_XREF=gi:4757943 /UG=Hs.54457 CD81 antigen (target of antiproliferative antibody 1) /FL=gb:BC002978.1 gb:M33680.1 gb:NM_004356.1 </td> <td> NM_004356 </td> <td> CD81 molecule </td> <td> CD81 </td> <td> 975 </td> <td> NM_004356 /// XM_005253260 </td> <td> 0000187 // activation of MAPK activity // inferred from direct assay /// 0006661 // phosphatidylinositol biosynthetic process // inferred from direct assay /// 0008104 // protein localization // inferred from direct assay /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0043128 // positive regulation of 1-phosphatidylinositol 4-kinase activity // inferred from direct assay /// 0046488 // phosphatidylinositol metabolic process // inferred from direct assay /// 0046718 // viral entry into host cell // traceable author statement /// 0046813 // receptor-mediated virion attachment to host cell // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050776 // regulation of immune response // traceable author statement </td> <td> 0001772 // immunological synapse // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0023026 // MHC class II protein complex binding // inferred from direct assay </td> <td> 196.78 </td> <td> 1139.96 </td> <td> 2.22 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 213541_s_at </td> <td> 213541_s_at </td> <td> AI351043 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI351043 /FEA=EST /DB_XREF=gi:4088249 /DB_XREF=est:qt22a08.x1 /CLONE=IMAGE:1948310 /UG=Hs.279477 ESTs </td> <td> AI351043 </td> <td> v-ets avian erythroblastosis virus E26 oncogene homolog </td> <td> ERG </td> <td> 2078 </td> <td> NM_001136154 /// NM_001136155 /// NM_001243428 /// NM_001243429 /// NM_001243432 /// NM_001243433 /// NM_001291391 /// NM_004449 /// NM_182918 /// NR_111949 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030154 // cell differentiation // not recorded </td> <td> 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 62.65 </td> <td> 435.10 </td> <td> 2.22 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201166_s_at </td> <td> 201166_s_at </td> <td> NM_014676 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014676.1 /DEF=Homo sapiens pumilio (Drosophila) homolog 1 (PUM1), mRNA. /FEA=mRNA /GEN=PUM1 /PROD=pumilio (Drosophila) homolog 1 /DB_XREF=gi:13491165 /UG=Hs.153834 pumilio (Drosophila) homolog 1 /FL=gb:AF315592.1 gb:NM_014676.1 </td> <td> NM_014676 </td> <td> pumilio RNA-binding family member 1 </td> <td> PUM1 </td> <td> 9698 </td> <td> NM_001020658 /// NM_014676 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -70.68 </td> <td> 392.66 </td> <td> -2.22 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212063_at </td> <td> 212063_at </td> <td> BE903880 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE903880 /FEA=EST /DB_XREF=gi:10395551 /DB_XREF=est:601494678F1 /CLONE=IMAGE:3896970 /UG=Hs.323950 zinc finger protein 6 (CMPX1) </td> <td> BE903880 </td> <td> CD44 molecule (Indian blood group) </td> <td> CD44 </td> <td> 960 </td> <td> NM_000610 /// NM_001001389 /// NM_001001390 /// NM_001001391 /// NM_001001392 /// NM_001202555 /// NM_001202556 /// NM_001202557 /// XM_005253231 /// XM_005253232 /// XM_005253233 /// XM_005253234 /// XM_005253235 /// XM_005253238 /// XM_005253239 /// XM_005253240 /// XM_006718388 /// XM_006718389 /// XM_006718390 </td> <td> 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0002246 // wound healing involved in inflammatory response // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030212 // hyaluronan metabolic process // traceable author statement /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0030214 // hyaluronan catabolic process // traceable author statement /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0051216 // cartilage development // inferred from expression pattern /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060442 // branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070487 // monocyte aggregation // inferred from mutant phenotype /// 1900625 // positive regulation of monocyte aggregation // inferred from mutant phenotype /// 1902166 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004415 // hyalurononglucosaminidase activity // inferred from direct assay /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0005540 // hyaluronic acid binding // inferred from direct assay /// 0005540 // hyaluronic acid binding // non-traceable author statement </td> <td> -36.03 </td> <td> 227.11 </td> <td> -2.22 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201477_s_at </td> <td> 201477_s_at </td> <td> NM_001033 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001033.1 /DEF=Homo sapiens ribonucleotide reductase M1 polypeptide (RRM1), mRNA. /FEA=mRNA /GEN=RRM1 /PROD=ribonucleotide reductase M1 polypeptide /DB_XREF=gi:4506748 /UG=Hs.2934 ribonucleotide reductase M1 polypeptide /FL=gb:NM_001033.1 </td> <td> NM_001033 </td> <td> ribonucleotide reductase M1 </td> <td> RRM1 </td> <td> 6240 </td> <td> NM_001033 </td> <td> 0000278 // mitotic cell cycle // inferred from electronic annotation /// 0006206 // pyrimidine nucleobase metabolic process // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from sequence or structural similarity /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0021846 // cell proliferation in forebrain // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation </td> <td> 0005635 // nuclear envelope // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005971 // ribonucleoside-diphosphate reductase complex // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0017076 // purine nucleotide binding // inferred from electronic annotation </td> <td> 65.05 </td> <td> 327.52 </td> <td> 2.22 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 214170_x_at </td> <td> 214170_x_at </td> <td> AA669797 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA669797 /FEA=EST /DB_XREF=gi:2631296 /DB_XREF=est:ag36c01.s1 /CLONE=IMAGE:1118880 /UG=Hs.75653 fumarate hydratase </td> <td> AA669797 </td> <td> fumarate hydratase </td> <td> FH </td> <td> 2271 </td> <td> NM_000143 </td> <td> 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006106 // fumarate metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0045239 // tricarboxylic acid cycle enzyme complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004333 // fumarate hydratase activity // not recorded /// 0016829 // lyase activity // inferred from electronic annotation </td> <td> 50.00 </td> <td> 301.88 </td> <td> 2.22 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201040_at </td> <td> 201040_at </td> <td> NM_002070 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002070.1 /DEF=Homo sapiens guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 (GNAI2), mRNA.  /FEA=mRNA /GEN=GNAI2 /PROD=guanine nucleotide binding protein (G protein),alpha inhibiting activity polypeptide 2 /DB_XREF=gi:4504040 /UG=Hs.77269 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 /FL=gb:J03004.1 gb:NM_002070.1 </td> <td> NM_002070 </td> <td> guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 </td> <td> GNAI2 </td> <td> 2771 </td> <td> NM_001166425 /// NM_001282617 /// NM_001282618 /// NM_001282619 /// NM_001282620 /// NM_002070 </td> <td> 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0001973 // adenosine receptor signaling pathway // not recorded /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007194 // negative regulation of adenylate cyclase activity // traceable author statement /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // not recorded /// 0007268 // synaptic transmission // traceable author statement /// 0007584 // response to nutrient // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0043434 // response to peptide hormone // inferred from sequence or structural similarity /// 0050805 // negative regulation of synaptic transmission // inferred from electronic annotation /// 0051301 // cell division // inferred from mutant phenotype /// 0051924 // regulation of calcium ion transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // not recorded /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // not recorded /// 0003924 // GTPase activity // not recorded /// 0004871 // signal transducer activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 86.82 </td> <td> 544.04 </td> <td> 2.22 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212956_at </td> <td> 212956_at </td> <td> AI348094 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI348094 /FEA=EST /DB_XREF=gi:4085300 /DB_XREF=est:qp61g12.x1 /CLONE=IMAGE:1927558 /UG=Hs.90419 KIAA0882 protein </td> <td> AI348094 </td> <td> TBC1 domain family, member 9 (with GRAM domain) </td> <td> TBC1D9 </td> <td> 23158 </td> <td> NM_015130 </td> <td> 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td>  </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation </td> <td> -59.98 </td> <td> 402.69 </td> <td> -2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 221371_at </td> <td> 221371_at </td> <td> NM_005092 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005092.1 /DEF=Homo sapiens tumor necrosis factor (ligand) superfamily, member 18 (TNFSF18), mRNA.  /FEA=CDS /GEN=TNFSF18 /PROD=tumor necrosis factor (ligand) superfamily,member 18 /DB_XREF=gi:4827033 /UG=Hs.248197 tumor necrosis factor (ligand) superfamily, member 18 /FL=gb:AF117713.1 gb:AF125303.1 gb:NM_005092.1 </td> <td> NM_005092 </td> <td> tumor necrosis factor (ligand) superfamily, member 18 </td> <td> TNFSF18 </td> <td> 8995 </td> <td> NM_005092 </td> <td> 0002309 // T cell proliferation involved in immune response // inferred from sequence or structural similarity /// 0002376 // immune system process // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from sequence or structural similarity /// 0042129 // regulation of T cell proliferation // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity </td> <td> 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0032813 // tumor necrosis factor receptor superfamily binding // inferred from sequence or structural similarity </td> <td> -86.98 </td> <td> 217.44 </td> <td> -2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 208817_at </td> <td> 208817_at </td> <td> BC000419 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000419.1 /DEF=Homo sapiens, catechol-O-methyltransferase, clone MGC:8663, mRNA, complete cds.  /FEA=mRNA /PROD=catechol-O-methyltransferase /DB_XREF=gi:12653300 /UG=Hs.240013 catechol-O-methyltransferase /FL=gb:BC000419.1 gb:M58525.1 gb:M65212.1 gb:NM_007310.1 gb:NM_000754.2 </td> <td> BC000419 </td> <td> catechol-O-methyltransferase </td> <td> COMT </td> <td> 1312 </td> <td> NM_000754 /// NM_001135161 /// NM_001135162 /// NM_007310 /// XM_005261229 </td> <td> 0006584 // catecholamine metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0009712 // catechol-containing compound metabolic process // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // inferred from electronic annotation /// 0032259 // methylation // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0042135 // neurotransmitter catabolic process // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // traceable author statement /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042420 // dopamine catabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045963 // negative regulation of dopamine metabolic process // inferred from electronic annotation /// 0048265 // response to pain // inferred from electronic annotation /// 0048609 // multicellular organismal reproductive process // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050668 // positive regulation of homocysteine metabolic process // inferred from electronic annotation </td> <td> 0005622 // intracellular // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008171 // O-methyltransferase activity // traceable author statement /// 0016206 // catechol O-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -50.05 </td> <td> 289.98 </td> <td> -2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 221255_s_at </td> <td> 221255_s_at </td> <td> NM_031298 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031298.1 /DEF=Homo sapiens hypothetical protein MGC2963 (MGC2963), mRNA. /FEA=mRNA /GEN=MGC2963 /PROD=hypothetical protein MGC2963 /DB_XREF=gi:13775219 /FL=gb:NM_031298.1 </td> <td> NM_031298 </td> <td> ER membrane protein complex subunit 6 </td> <td> EMC6 </td> <td> 83460 </td> <td> NM_001014764 /// NM_031298 </td> <td>  </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0072546 // ER membrane protein complex // inferred from direct assay </td> <td>  </td> <td> 46.07 </td> <td> 197.69 </td> <td> 2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201720_s_at </td> <td> 201720_s_at </td> <td> AI589086 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI589086 /FEA=EST /DB_XREF=gi:4598134 /DB_XREF=est:tf80g10.x1 /CLONE=IMAGE:2105634 /UG=Hs.79356 Lysosomal-associated multispanning membrane protein-5 /FL=gb:U51240.1 gb:NM_006762.1 gb:U30498.1 </td> <td> AI589086 </td> <td> lysosomal protein transmembrane 5 </td> <td> LAPTM5 </td> <td> 7805 </td> <td> NM_006762 </td> <td> 0006810 // transport // inferred from electronic annotation </td> <td> 0005764 // lysosome // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -46.55 </td> <td> 283.85 </td> <td> -2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 210466_s_at </td> <td> 210466_s_at </td> <td> BC002488 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002488.1 /DEF=Homo sapiens, Similar to DKFZP564M2423 protein, clone MGC:1357, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to DKFZP564M2423 protein /DB_XREF=gi:12803338 /UG=Hs.165998 PAI-1 mRNA-binding protein /FL=gb:BC002488.1 </td> <td> BC002488 </td> <td> SERPINE1 mRNA binding protein 1 </td> <td> SERBP1 </td> <td> 26135 </td> <td> NM_001018067 /// NM_001018068 /// NM_001018069 /// NM_015640 </td> <td> 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 323.25 </td> <td> 764.73 </td> <td> 2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 209489_at </td> <td> 209489_at </td> <td> N25915 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N25915 /FEA=EST /DB_XREF=gi:1140263 /DB_XREF=est:yx87a02.s1 /CLONE=IMAGE:268682 /UG=Hs.81248 CUG triplet repeat, RNA-binding protein 1 /FL=gb:AF248648.1 </td> <td> N25915 </td> <td> CUGBP, Elav-like family member 1 </td> <td> CELF1 </td> <td> 10658 </td> <td> NM_001025596 /// NM_001172639 /// NM_001172640 /// NM_006560 /// NM_198700 /// XM_005252754 /// XM_005252755 /// XM_005252756 /// XM_006718122 /// XM_006718123 /// XM_006718124 /// XM_006718125 /// XM_006718126 /// XM_006718127 /// XM_006718128 /// XM_006718129 /// XM_006718130 /// XM_006718131 </td> <td> 0006376 // mRNA splice site selection // inferred from sequence or structural similarity /// 0006397 // mRNA processing // traceable author statement /// 0007281 // germ cell development // non-traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009790 // embryo development // non-traceable author statement /// 0016246 // RNA interference // non-traceable author statement /// 0017148 // negative regulation of translation // non-traceable author statement /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000900 // translation repressor activity, nucleic acid binding // non-traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0031369 // translation initiation factor binding // inferred from electronic annotation /// 0042835 // BRE binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 58.15 </td> <td> 156.97 </td> <td> 2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201021_s_at </td> <td> 201021_s_at </td> <td> BF697964 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF697964 /FEA=EST /DB_XREF=gi:11983372 /DB_XREF=est:602130050F1 /CLONE=IMAGE:4286556 /UG=Hs.82306 destrin (actin depolymerizing factor) /FL=gb:NM_006870.2 </td> <td> BF697964 </td> <td> destrin (actin depolymerizing factor) </td> <td> DSTN </td> <td> 11034 </td> <td> NM_001011546 /// NM_006870 </td> <td> 0000910 // cytokinesis // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // traceable author statement /// 0030042 // actin filament depolymerization // inferred from electronic annotation /// 0030836 // positive regulation of actin filament depolymerization // inferred from electronic annotation /// 0051014 // actin filament severing // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation </td> <td> -134.50 </td> <td> 976.95 </td> <td> -2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 217956_s_at </td> <td> 217956_s_at </td> <td> NM_021204 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021204.1 /DEF=Homo sapiens E-1 enzyme (MASA), mRNA. /FEA=mRNA /GEN=MASA /PROD=E-1 enzyme /DB_XREF=gi:10864016 /UG=Hs.18442 E-1 enzyme /FL=gb:NM_021204.1 gb:AF113125.1 </td> <td> NM_021204 </td> <td> enolase-phosphatase 1 </td> <td> ENOPH1 </td> <td> 58478 </td> <td> NM_001292017 /// NM_021204 /// NR_120457 /// XM_005263168 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006595 // polyamine metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0019509 // L-methionine salvage from methylthioadenosine // inferred from direct assay /// 0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043874 // acireductone synthase activity // inferred from direct assay /// 0043874 // acireductone synthase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 43.62 </td> <td> 151.04 </td> <td> 2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 44654_at </td> <td> 44654_at </td> <td> AI669655 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI669655:wc12a05.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2314928 /clone_end=3' /gb=AI669655 /gi=4834429 /ug=Hs.30251 /len=649 </td> <td> AI669655 </td> <td> glucose 6 phosphatase, catalytic, 3 </td> <td> G6PC3 </td> <td> 92579 </td> <td> NM_138387 /// NR_028581 /// NR_028582 /// XM_006722179 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006796 // phosphate-containing compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0015760 // glucose-6-phosphate transport // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051156 // glucose 6-phosphate metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004346 // glucose-6-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 33.18 </td> <td> 196.66 </td> <td> 2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 220864_s_at </td> <td> 220864_s_at </td> <td> NM_015965 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015965.1 /DEF=Homo sapiens CGI-39 protein; cell death-regulatory protein GRIM19 (LOC51079), mRNA.  /FEA=mRNA /GEN=LOC51079 /PROD=CGI-39 protein; cell death-regulatory proteinGRIM19 /DB_XREF=gi:7705733 /UG=Hs.279574 CGI-39 protein; cell death-regulatory protein GRIM19 /FL=gb:AF132973.1 gb:AF155662.1 gb:NM_015965.1 </td> <td> NM_015965 </td> <td> NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 </td> <td> NDUFA13 </td> <td> 51079 </td> <td> NM_015965 </td> <td> 0006606 // protein import into nucleus // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0022904 // respiratory electron transport chain // traceable author statement /// 0030262 // apoptotic nuclear changes // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045039 // protein import into mitochondrial inner membrane // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from mutant phenotype /// 0097190 // apoptotic signaling pathway // inferred from direct assay /// 0097191 // extrinsic apoptotic signaling pathway // inferred from electronic annotation /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005746 // mitochondrial respiratory chain // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0003954 // NADH dehydrogenase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from direct assay </td> <td> 60.35 </td> <td> 323.07 </td> <td> 2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 218917_s_at </td> <td> 218917_s_at </td> <td> NM_018450 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018450.1 /DEF=Homo sapiens uncharacterized bone marrow protein BM029 (BM029), mRNA.  /FEA=mRNA /GEN=BM029 /PROD=uncharacterized bone marrow protein BM029 /DB_XREF=gi:8922086 /UG=Hs.8740 uncharacterized bone marrow protein BM029 /FL=gb:AF217506.1 gb:NM_018450.1 </td> <td> NM_018450 </td> <td> AT rich interactive domain 1A (SWI-like) </td> <td> ARID1A </td> <td> 8289 </td> <td> NM_006015 /// NM_018450 /// NM_139135 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0003205 // cardiac chamber development // inferred from electronic annotation /// 0003408 // optic cup formation involved in camera-type eye development // inferred from electronic annotation /// 0006325 // chromatin organization // inferred from electronic annotation /// 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030520 // intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0030900 // forebrain development // inferred from electronic annotation /// 0042766 // nucleosome mobilization // traceable author statement /// 0042921 // glucocorticoid receptor signaling pathway // inferred from direct assay /// 0043044 // ATP-dependent chromatin remodeling // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0048096 // chromatin-mediated maintenance of transcription // traceable author statement /// 0060674 // placenta blood vessel development // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from sequence or structural similarity /// 0090544 // BAF-type complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // non-traceable author statement /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0031491 // nucleosome binding // inferred from electronic annotation </td> <td> -55.20 </td> <td> 259.15 </td> <td> -2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 204937_s_at </td> <td> 204937_s_at </td> <td> NM_016325 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016325.1 /DEF=Homo sapiens zinc finger protein 274 (ZNF274), mRNA. /FEA=mRNA /GEN=ZNF274 /PROD=KRAB zinc finger protein HFB101L /DB_XREF=gi:7706506 /UG=Hs.83761 zinc finger protein 274 /FL=gb:AB029150.1 gb:NM_016325.1 </td> <td> NM_016325 </td> <td> zinc finger protein 274 </td> <td> ZNF274 </td> <td> 10782 </td> <td> NM_001278734 /// NM_001278735 /// NM_016324 /// NM_016325 /// NM_133502 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 36.33 </td> <td> 148.99 </td> <td> 2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201465_s_at </td> <td> 201465_s_at </td> <td> BC002646 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002646.1 /DEF=Homo sapiens, v-jun avian sarcoma virus 17 oncogene homolog, clone MGC:3338, mRNA, complete cds.  /FEA=mRNA /PROD=v-jun avian sarcoma virus 17 oncogene homolog /DB_XREF=gi:12803622 /UG=Hs.78465 v-jun avian sarcoma virus 17 oncogene homolog /FL=gb:BC002646.1 gb:NM_002228.2 </td> <td> BC002646 </td> <td> jun proto-oncogene </td> <td> JUN </td> <td> 3725 </td> <td> NM_002228 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001774 // microglial cell activation // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007184 // SMAD protein import into nucleus // inferred from direct assay /// 0007568 // aging // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0031953 // negative regulation of protein autophosphorylation // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035026 // leading edge cell differentiation // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043922 // negative regulation by host of viral transcription // inferred from direct assay /// 0043923 // positive regulation by host of viral transcription // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045657 // positive regulation of monocyte differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051365 // cellular response to potassium ion starvation // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from electronic annotation </td> <td> 0000228 // nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from electronic annotation </td> <td> 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred by curator /// 0003677 // DNA binding // traceable author statement /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070412 // R-SMAD binding // inferred from physical interaction /// 0071837 // HMG box domain binding // inferred from electronic annotation </td> <td> -47.08 </td> <td> 96.96 </td> <td> -2.21 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201717_at </td> <td> 201717_at </td> <td> NM_004927 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004927.1 /DEF=Homo sapiens chromosome 11 open reading frame 4 (C11ORF4), mRNA. /FEA=mRNA /GEN=C11ORF4 /PROD=chromosome 11 open reading frame 4 /DB_XREF=gi:4826648 /UG=Hs.75859 chromosome 11 open reading frame 4 /FL=gb:U39400.1 gb:BC004378.1 gb:NM_004927.1 </td> <td> NM_004927 </td> <td> mitochondrial ribosomal protein L49 </td> <td> MRPL49 </td> <td> 740 </td> <td> NM_004927 /// NR_037567 /// NR_037568 </td> <td> 0006412 // translation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 67.38 </td> <td> 281.94 </td> <td> 2.20 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212734_x_at </td> <td> 212734_x_at </td> <td> AI186735 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI186735 /FEA=EST /DB_XREF=gi:3737373 /DB_XREF=est:qe79b09.x1 /CLONE=IMAGE:1745177 /UG=Hs.180842 ribosomal protein L13 </td> <td> AI186735 </td> <td> ribosomal protein L13 /// small nucleolar RNA, C/D box 68 </td> <td> RPL13 /// SNORD68 </td> <td> 6137 /// 606500 </td> <td> NM_000977 /// NM_001243130 /// NM_001243131 /// NM_033251 /// NR_002450 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022626 // cytosolic ribosome // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -573.80 </td> <td> 2809.53 </td> <td> -2.20 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201713_s_at </td> <td> 201713_s_at </td> <td> D42063 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D42063.1 /DEF=Human mRNA for RanBP2 (Ran-binding protein 2), complete cds. /FEA=mRNA /PROD=RanBP2 (Ran-binding protein 2) /DB_XREF=gi:924266 /UG=Hs.199179 RAN binding protein 2 /FL=gb:NM_006267.2 gb:D42063.1 </td> <td> D42063 </td> <td> RAN binding protein 2 </td> <td> RANBP2 </td> <td> 5903 </td> <td> NM_006267 /// XM_005264002 /// XM_005264003 /// XM_005264004 /// XM_005264005 /// XM_005264006 /// XM_005264007 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006606 // protein import into nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0033132 // negative regulation of glucokinase activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046907 // intracellular transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0090526 // regulation of gluconeogenesis involved in cellular glucose homeostasis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0042405 // nuclear inclusion body // inferred from direct assay /// 0044615 // nuclear pore nuclear basket // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008536 // Ran GTPase binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 44.53 </td> <td> 249.96 </td> <td> 2.20 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 202522_at </td> <td> 202522_at </td> <td> AL031591 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL031591 /DEF=Human DNA sequence from clone RP3-353E16 on chromosome 22q11.22-12.3 Contains the 5 part of the MN1 gene for meningioma (disrupted in balanced translocation) 1, the PITPNB gene for phosphatidylinositol transfer protein beta, ESTs, STSs, GSSs and ... /FEA=mRNA /DB_XREF=gi:6006484 /UG=Hs.7370 phosphotidylinositol transfer protein, beta /FL=gb:D30037.1 gb:NM_012399.1 </td> <td> AL031591 </td> <td> phosphatidylinositol transfer protein, beta </td> <td> PITPNB </td> <td> 23760 </td> <td> NM_001284277 /// NM_001284278 /// NM_012399 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015914 // phospholipid transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008289 // lipid binding // inferred from electronic annotation </td> <td> -136.65 </td> <td> 694.67 </td> <td> -2.20 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 215714_s_at </td> <td> 215714_s_at </td> <td> AF254822 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF254822 /DEF=Homo sapiens SMARCA4 isoform (SMARCA4) gene, complete cds, alternatively spliced /FEA=CDS_2 /DB_XREF=gi:10946127 /UG=Hs.78202 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 </td> <td> AF254822 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 </td> <td> SMARCA4 </td> <td> 6597 </td> <td> NM_001128844 /// NM_001128845 /// NM_001128846 /// NM_001128847 /// NM_001128848 /// NM_001128849 /// NM_003072 /// XM_005260028 /// XM_005260030 /// XM_005260031 /// XM_005260032 /// XM_005260033 /// XM_005260034 /// XM_005260035 /// XM_006722845 /// XM_006722846 /// XM_006722847 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001832 // blastocyst growth // inferred from electronic annotation /// 0001835 // blastocyst hatching // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003407 // neural retina development // inferred from expression pattern /// 0006200 // ATP catabolic process // inferred from genetic interaction /// 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred by curator /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0007070 // negative regulation of transcription from RNA polymerase II promoter during mitosis // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007403 // glial cell fate determination // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010424 // DNA methylation on cytosine within a CG sequence // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030900 // forebrain development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035887 // aortic smooth muscle cell differentiation // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0043923 // positive regulation by host of viral transcription // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048562 // embryonic organ morphogenesis // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0060318 // definitive erythrocyte differentiation // inferred from electronic annotation /// 0060347 // heart trabecula formation // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005719 // nuclear euchromatin // inferred from electronic annotation /// 0005726 // perichromatin fibrils // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from sequence or structural similarity /// 0071778 // WINAC complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // inferred from genetic interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042393 // histone binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction /// 0070577 // lysine-acetylated histone binding // inferred from direct assay </td> <td> 59.43 </td> <td> 201.41 </td> <td> 2.20 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201755_at </td> <td> 201755_at </td> <td> NM_006739 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006739.1 /DEF=Homo sapiens minichromosome maintenance deficient (S. cerevisiae) 5 (cell division cycle 46) (MCM5), mRNA.  /FEA=mRNA /GEN=MCM5 /PROD=minichromosome maintenance deficient (S.cerevisiae) 5 (cell division cycle 46) /DB_XREF=gi:6981191 /UG=Hs.77171 minichromosome maintenance deficient (S. cerevisiae) 5 (cell division cycle 46) /FL=gb:D83986.1 gb:BC000142.1 gb:BC003656.1 gb:NM_006739.1 </td> <td> NM_006739 </td> <td> minichromosome maintenance complex component 5 </td> <td> MCM5 </td> <td> 4174 </td> <td> NM_006739 /// XM_006724242 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006270 // DNA replication initiation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0042555 // MCM complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 27.65 </td> <td> 37.17 </td> <td> 2.20 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 205417_s_at </td> <td> 205417_s_at </td> <td> NM_004393 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004393.1 /DEF=Homo sapiens dystroglycan 1 (dystrophin-associated glycoprotein 1) (DAG1), mRNA.  /FEA=mRNA /GEN=DAG1 /PROD=dystroglycan 1 precursor /DB_XREF=gi:4758115 /UG=Hs.76111 dystroglycan 1 (dystrophin-associated glycoprotein 1) /FL=gb:L19711.1 gb:NM_004393.1 </td> <td> NM_004393 </td> <td> dystroglycan 1 (dystrophin-associated glycoprotein 1) </td> <td> DAG1 </td> <td> 1605 </td> <td> NM_001165928 /// NM_001177634 /// NM_001177635 /// NM_001177636 /// NM_001177637 /// NM_001177638 /// NM_001177639 /// NM_001177640 /// NM_001177641 /// NM_001177642 /// NM_001177643 /// NM_001177644 /// NM_004393 </td> <td> 0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006607 // NLS-bearing protein import into nucleus // inferred from direct assay /// 0007016 // cytoskeletal anchoring at plasma membrane // inferred from mutant phenotype /// 0009615 // response to virus // inferred from electronic annotation /// 0014044 // Schwann cell development // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016340 // calcium-dependent cell-matrix adhesion // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from direct assay /// 0021682 // nerve maturation // inferred from electronic annotation /// 0022011 // myelination in peripheral nervous system // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0034453 // microtubule anchoring // inferred from mutant phenotype /// 0043409 // negative regulation of MAPK cascade // inferred from mutant phenotype /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling // inferred from mutant phenotype /// 0060441 // epithelial tube branching involved in lung morphogenesis // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0071679 // commissural neuron axon guidance // inferred from electronic annotation /// 0071711 // basement membrane organization // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005604 // basement membrane // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0009279 // cell outer membrane // inferred from electronic annotation /// 0016010 // dystrophin-associated glycoprotein complex // inferred from direct assay /// 0016011 // dystroglycan complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0033268 // node of Ranvier // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043034 // costamere // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070938 // contractile ring // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0002162 // dystroglycan binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // inferred from mutant phenotype /// 0015631 // tubulin binding // inferred from direct assay /// 0017166 // vinculin binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from direct assay /// 0043237 // laminin-1 binding // inferred from sequence or structural similarity /// 0051393 // alpha-actinin binding // inferred from direct assay </td> <td> 56.10 </td> <td> 249.43 </td> <td> 2.20 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212151_at </td> <td> 212151_at </td> <td> BF967998 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF967998 /FEA=EST /DB_XREF=gi:12335213 /DB_XREF=est:602269506F1 /CLONE=IMAGE:4357777 /UG=Hs.21851 Homo sapiens cDNA FLJ12900 fis, clone NT2RP2004321 </td> <td> BF967998 </td> <td> pre-B-cell leukemia homeobox 1 </td> <td> PBX1 </td> <td> 5087 </td> <td> NM_001204961 /// NM_001204963 /// NM_002585 /// XM_005245228 /// XM_005245229 /// XM_005245230 /// XM_006711347 </td> <td> 0001655 // urogenital system development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from electronic annotation /// 0010971 // positive regulation of G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 29.75 </td> <td> 55.05 </td> <td> 2.20 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 206559_x_at </td> <td> 206559_x_at </td> <td> NM_001403 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001403.1 /DEF=Homo sapiens eukaryotic translation elongation factor 1 alpha 1-like 14 (EEF1A1L14), mRNA.  /FEA=mRNA /GEN=EEF1A1L14 /PROD=eukaryotic translation elongation factor 1 alpha1-like 14 /DB_XREF=gi:4503472 /UG=Hs.274466 eukaryotic translation elongation factor 1 alpha 1-like 14 /FL=gb:NM_001403.1 </td> <td> NM_001403 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> -1542.20 </td> <td> 5840.85 </td> <td> -2.19 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 219021_at </td> <td> 219021_at </td> <td> NM_018320 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018320.1 /DEF=Homo sapiens hypothetical protein FLJ11099 (FLJ11099), mRNA. /FEA=mRNA /GEN=FLJ11099 /PROD=hypothetical protein FLJ11099 /DB_XREF=gi:8922862 /UG=Hs.131731 hypothetical protein FLJ11099 /FL=gb:NM_018320.1 </td> <td> NM_018320 </td> <td> ring finger protein 121 </td> <td> RNF121 </td> <td> 55298 </td> <td> NM_018320 /// NM_194452 /// NM_194453 /// NR_024147 /// NR_024148 /// XM_006718629 /// XM_006718630 /// XM_006718631 /// XM_006718632 /// XM_006718633 /// XM_006718634 /// XM_006718635 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 32.35 </td> <td> 64.47 </td> <td> 2.19 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 213798_s_at </td> <td> 213798_s_at </td> <td> AA806142 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA806142 /FEA=EST /DB_XREF=gi:2874892 /DB_XREF=est:oe29d06.s1 /CLONE=IMAGE:1409963 /UG=Hs.104125 adenylyl cyclase-associated protein </td> <td> AA806142 </td> <td> CAP, adenylate cyclase-associated protein 1 (yeast) </td> <td> CAP1 </td> <td> 10487 </td> <td> NM_001105530 /// NM_006367 /// XM_005270367 /// XM_005270368 /// XM_006710294 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 139.67 </td> <td> 742.84 </td> <td> 2.19 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201520_s_at </td> <td> 201520_s_at </td> <td> BF034561 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF034561 /FEA=EST /DB_XREF=gi:10742273 /DB_XREF=est:601455476F1 /CLONE=IMAGE:3859242 /UG=Hs.79295 G-rich RNA sequence binding factor 1 /FL=gb:NM_002092.1 gb:U07231.1 </td> <td> BF034561 </td> <td> G-rich RNA sequence binding factor 1 </td> <td> GRSF1 </td> <td> 2926 </td> <td> NM_001098477 /// NM_002092 /// XM_005265681 /// XM_005265685 </td> <td> 0006378 // mRNA polyadenylation // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003729 // mRNA binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 27.88 </td> <td> 320.19 </td> <td> 2.19 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 203097_s_at </td> <td> 203097_s_at </td> <td> NM_014247 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014247.1 /DEF=Homo sapiens PDZ domain containing guanine nucleotide exchange factor(GEF)1 (PDZ-GEF1), mRNA.  /FEA=mRNA /GEN=PDZ-GEF1 /PROD=PDZ domain containing guanine nucleotideexchange factor(GEF)1 /DB_XREF=gi:7657260 /UG=Hs.154545 PDZ domain containing guanine nucleotide exchange factor(GEF)1 /FL=gb:AB002311.1 gb:NM_014247.1 </td> <td> NM_014247 </td> <td> Rap guanine nucleotide exchange factor (GEF) 2 </td> <td> RAPGEF2 </td> <td> 9693 </td> <td> NM_014247 /// XM_005263358 /// XM_005263359 /// XM_005263360 /// XM_005263361 /// XM_006714420 /// XM_006714421 /// XM_006714422 </td> <td> 0000165 // MAPK cascade // non-traceable author statement /// 0001568 // blood vessel development // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007218 // neuropeptide signaling pathway // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0019933 // cAMP-mediated signaling // inferred from direct assay /// 0019933 // cAMP-mediated signaling // non-traceable author statement /// 0021591 // ventricular system development // inferred from sequence or structural similarity /// 0021884 // forebrain neuron development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from direct assay /// 0031547 // brain-derived neurotrophic factor receptor signaling pathway // inferred from sequence or structural similarity /// 0032092 // positive regulation of protein binding // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0032486 // Rap protein signal transduction // inferred from mutant phenotype /// 0032854 // positive regulation of Rap GTPase activity // inferred from direct assay /// 0032854 // positive regulation of Rap GTPase activity // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // traceable author statement /// 0038180 // nerve growth factor signaling pathway // inferred from sequence or structural similarity /// 0043950 // positive regulation of cAMP-mediated signaling // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0048022 // negative regulation of melanin biosynthetic process // inferred from sequence or structural similarity /// 0048167 // regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0050774 // negative regulation of dendrite morphogenesis // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0061028 // establishment of endothelial barrier // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071320 // cellular response to cAMP // inferred from direct assay /// 0071321 // cellular response to cGMP // inferred from direct assay /// 0071880 // adenylate cyclase-activating adrenergic receptor signaling pathway // inferred from direct assay /// 1901888 // regulation of cell junction assembly // inferred from mutant phenotype /// 1990090 // cellular response to nerve growth factor stimulus // inferred from sequence or structural similarity /// 2000481 // positive regulation of cAMP-dependent protein kinase activity // inferred from direct assay /// 2000670 // positive regulation of dendritic cell apoptotic process // inferred from direct assay /// 2001214 // positive regulation of vasculogenesis // inferred from sequence or structural similarity /// 2001224 // positive regulation of neuron migration // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0004871 // signal transducer activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017034 // Rap guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0017034 // Rap guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019992 // diacylglycerol binding // non-traceable author statement /// 0030165 // PDZ domain binding // inferred from direct assay /// 0030552 // cAMP binding // inferred from direct assay /// 0030553 // cGMP binding // inferred from direct assay /// 0031697 // beta-1 adrenergic receptor binding // inferred from direct assay /// 0046582 // Rap GTPase activator activity // inferred from direct assay /// 0050699 // WW domain binding // inferred from direct assay </td> <td> -75.65 </td> <td> 335.27 </td> <td> -2.19 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200777_s_at </td> <td> 200777_s_at </td> <td> NM_014670 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014670.1 /DEF=Homo sapiens KIAA0005 gene product (KIAA0005), mRNA. /FEA=mRNA /GEN=KIAA0005 /PROD=KIAA0005 gene product /DB_XREF=gi:7661849 /UG=Hs.155291 KIAA0005 gene product /FL=gb:D13630.1 gb:NM_014670.1 </td> <td> NM_014670 </td> <td> basic leucine zipper and W2 domains 1 </td> <td> BZW1 </td> <td> 9689 </td> <td> NM_001207067 /// NM_001207068 /// NM_001207069 /// NM_014670 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 70.75 </td> <td> 757.98 </td> <td> 2.19 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201128_s_at </td> <td> 201128_s_at </td> <td> NM_001096 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001096.1 /DEF=Homo sapiens ATP citrate lyase (ACLY), mRNA. /FEA=mRNA /GEN=ACLY /PROD=ATP citrate lyase /DB_XREF=gi:4501864 /UG=Hs.174140 ATP citrate lyase /FL=gb:NM_001096.1 </td> <td> NM_001096 </td> <td> ATP citrate lyase </td> <td> ACLY </td> <td> 47 </td> <td> NM_001096 /// NM_198830 /// XM_005257393 /// XM_005257394 /// XM_005257395 </td> <td> 0006101 // citrate metabolic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006200 // ATP catabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from direct assay /// 0015936 // coenzyme A metabolic process // traceable author statement /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0031325 // positive regulation of cellular metabolic process // traceable author statement /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044262 // cellular carbohydrate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0009346 // citrate lyase complex // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003878 // ATP citrate synthase activity // traceable author statement /// 0004775 // succinate-CoA ligase (ADP-forming) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046912 // transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation </td> <td> 77.35 </td> <td> 966.93 </td> <td> 2.19 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 203538_at </td> <td> 203538_at </td> <td> NM_001745 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001745.1 /DEF=Homo sapiens calcium modulating ligand (CAMLG), mRNA. /FEA=mRNA /GEN=CAMLG /PROD=calcium modulating ligand /DB_XREF=gi:4502558 /UG=Hs.13572 calcium modulating ligand /FL=gb:NM_001745.1 gb:U18242.1 </td> <td> NM_001745 </td> <td> calcium modulating ligand </td> <td> CAMLG </td> <td> 819 </td> <td> NM_001745 </td> <td> 0001881 // receptor recycling // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation </td> <td> -57.35 </td> <td> 214.10 </td> <td> -2.19 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200733_s_at </td> <td> 200733_s_at </td> <td> U48296 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U48296.1 /DEF=Homo sapiens protein tyrosine phosphatase PTPCAAX1 (hPTPCAAX1) mRNA, complete cds.  /FEA=mRNA /GEN=hPTPCAAX1 /PROD=protein tyrosine phosphatase PTPCAAX1 /DB_XREF=gi:1777754 /UG=Hs.227777 protein tyrosine phosphatase type IVA, member 1 /FL=gb:U48296.1 gb:NM_003463.1 </td> <td> U48296 </td> <td> protein tyrosine phosphatase type IVA, member 1 </td> <td> PTP4A1 </td> <td> 7803 </td> <td> NM_003463 /// XM_006715563 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // non-traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009898 // cytoplasmic side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // non-traceable author statement /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> 88.88 </td> <td> 187.06 </td> <td> 2.19 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 219762_s_at </td> <td> 219762_s_at </td> <td> NM_015414 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015414.1 /DEF=Homo sapiens ribosomal protein L36 (RPL36), mRNA. /FEA=mRNA /GEN=RPL36 /PROD=ribosomal protein L36 /DB_XREF=gi:7661637 /UG=Hs.300759 ribosomal protein L36 /FL=gb:AF077043.1 gb:NM_015414.1 </td> <td> NM_015414 </td> <td> ribosomal protein L36 </td> <td> RPL36 </td> <td> 25873 </td> <td> NM_015414 /// NM_033643 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -99.73 </td> <td> 895.16 </td> <td> -2.18 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 213226_at </td> <td> 213226_at </td> <td> AI346350 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI346350 /FEA=EST /DB_XREF=gi:4083556 /DB_XREF=est:qp50c06.x1 /CLONE=IMAGE:1926442 /UG=Hs.91728 polymyositisscleroderma autoantigen 1 (75kD) </td> <td> AI346350 </td> <td> cyclin A2 </td> <td> CCNA2 </td> <td> 890 </td> <td> NM_001237 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007095 // mitotic G2 DNA damage checkpoint // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0010389 // regulation of G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0033762 // response to glucagon // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0001939 // female pronucleus // inferred from electronic annotation /// 0001940 // male pronucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation </td> <td> 47.67 </td> <td> 160.76 </td> <td> 2.18 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 209300_s_at </td> <td> 209300_s_at </td> <td> BC002888 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002888.1 /DEF=Homo sapiens, Similar to DKFZP566B183 protein, clone MGC:10356, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to DKFZP566B183 protein /DB_XREF=gi:12804070 /UG=Hs.12305 DKFZP566B183 protein /FL=gb:BC002888.1 </td> <td> BC002888 </td> <td> NECAP endocytosis associated 1 </td> <td> NECAP1 </td> <td> 25977 </td> <td> NM_015509 /// NR_024260 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030125 // clathrin vesicle coat // inferred from electronic annotation /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 36.25 </td> <td> 92.38 </td> <td> 2.18 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200909_s_at </td> <td> 200909_s_at </td> <td> NM_001004 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001004.1 /DEF=Homo sapiens ribosomal protein, large P2 (RPLP2), mRNA. /FEA=mRNA /GEN=RPLP2 /PROD=ribosomal protein, large P2 /DB_XREF=gi:4506670 /UG=Hs.119500 ribosomal protein, large P2 /FL=gb:BC005354.1 gb:M17887.1 gb:NM_001004.1 </td> <td> NM_001004 </td> <td> ribosomal protein, large, P2 /// small nucleolar RNA, H/ACA box 52 </td> <td> RPLP2 /// SNORA52 </td> <td> 6181 /// 619565 </td> <td> NM_001004 /// NR_002585 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement </td> <td> -271.53 </td> <td> 2851.69 </td> <td> -2.18 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 202805_s_at </td> <td> 202805_s_at </td> <td> NM_004996 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004996.2 /DEF=Homo sapiens ATP-binding cassette, sub-family C (CFTRMRP), member 1 (ABCC1), transcript variant 1, mRNA.  /FEA=mRNA /GEN=ABCC1 /PROD=ATP-binding cassette, sub-family C, member 1,isoform 1 /DB_XREF=gi:9955961 /UG=Hs.89433 ATP-binding cassette, sub-family C (CFTRMRP), member 1 /FL=gb:L05628.1 gb:NM_004996.2 </td> <td> NM_004996 </td> <td> ATP-binding cassette, sub-family C (CFTR/MRP), member 1 </td> <td> ABCC1 </td> <td> 4363 </td> <td> NM_004996 /// NM_019862 /// NM_019898 /// NM_019899 /// NM_019900 /// NM_019901 /// NM_019902 /// XM_005255327 /// XM_005255328 /// XM_005255329 /// XM_006720884 /// XM_006720885 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006691 // leukotriene metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009235 // cobalamin metabolic process // traceable author statement /// 0019369 // arachidonic acid metabolic process // traceable author statement /// 0042493 // response to drug // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation </td> <td> -30.00 </td> <td> 206.62 </td> <td> -2.18 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200061_s_at </td> <td> 200061_s_at </td> <td> BC000523 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000523.1 /DEF=Homo sapiens, Similar to ribosomal protein S24, clone MGC:8595, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to ribosomal protein S24 /DB_XREF=gi:12653502 /UG=Hs.180450 ribosomal protein S24 /FL=gb:BC000523.1 gb:BC003149.1 </td> <td> BC000523 </td> <td> ribosomal protein S24 </td> <td> RPS24 </td> <td> 6229 </td> <td> NM_001026 /// NM_001142282 /// NM_001142283 /// NM_001142284 /// NM_001142285 /// NM_033022 /// XM_006717938 /// XR_428711 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000462 // maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // not recorded /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0034101 // erythrocyte homeostasis // inferred from mutant phenotype /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // not recorded /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0015935 // small ribosomal subunit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0031369 // translation initiation factor binding // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -541.35 </td> <td> 3364.35 </td> <td> -2.18 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200933_x_at </td> <td> 200933_x_at </td> <td> NM_001007 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001007.1 /DEF=Homo sapiens ribosomal protein S4, X-linked (RPS4X), mRNA. /FEA=mRNA /GEN=RPS4X /PROD=ribosomal protein S4, X-linked /DB_XREF=gi:4506724 /UG=Hs.108124 ribosomal protein S4, X-linked /FL=gb:BC000472.1 gb:BC002569.1 gb:M58458.1 gb:M22146.1 gb:NM_001007.1 </td> <td> NM_001007 </td> <td> ribosomal protein S4, X-linked </td> <td> RPS4X </td> <td> 6191 </td> <td> NM_001007 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007275 // multicellular organismal development // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from direct assay /// 0005844 // polysome // inferred from direct assay /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from mutant phenotype /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -491.60 </td> <td> 3660.90 </td> <td> -2.18 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 204998_s_at </td> <td> 204998_s_at </td> <td> NM_012068 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012068.2 /DEF=Homo sapiens activating transcription factor 5 (ATF5), mRNA. /FEA=mRNA /GEN=ATF5 /PROD=activating transcription factor 5 /DB_XREF=gi:12597624 /UG=Hs.9754 activating transcription factor 5 /FL=gb:AF305687.1 gb:AB021663.2 gb:NM_012068.2 gb:BC005174.1 </td> <td> NM_012068 </td> <td> activating transcription factor 5 </td> <td> ATF5 </td> <td> 22809 </td> <td> NM_001193646 /// NM_001290746 /// NM_012068 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0021889 // olfactory bulb interneuron differentiation // inferred from electronic annotation /// 0021891 // olfactory bulb interneuron development // inferred from electronic annotation /// 0021988 // olfactory lobe development // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from mutant phenotype /// 0001228 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred by curator /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 31.52 </td> <td> 57.91 </td> <td> 2.18 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 214152_at </td> <td> 214152_at </td> <td> AU144243 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU144243 /FEA=EST /DB_XREF=gi:11005764 /DB_XREF=est:AU144243 /CLONE=HEMBA1001328 /UG=Hs.247118 phosphatidylinositol glycan, class B </td> <td> AU144243 </td> <td> cell cycle progression 1 /// DYX1C1-CCPG1 readthrough (NMD candidate) </td> <td> CCPG1 /// DYX1C1-CCPG1 </td> <td> 9236 /// 100533483 </td> <td> NM_001204450 /// NM_001204451 /// NM_004748 /// NM_020739 /// NR_037923 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0045787 // positive regulation of cell cycle // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 2001106 // regulation of Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 25.60 </td> <td> 64.55 </td> <td> 2.17 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200662_s_at </td> <td> 200662_s_at </td> <td> NM_014765 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014765.1 /DEF=Homo sapiens translocase of outer mitochondrial membrane 20 (yeast) homolog (KIAA0016), mRNA.  /FEA=mRNA /GEN=KIAA0016 /PROD=translocase of outer mitochondrial membrane 20(yeast) homolog /DB_XREF=gi:7657256 /UG=Hs.75187 translocase of outer mitochondrial membrane 20 (yeast) homolog /FL=gb:BC000882.1 gb:D13641.1 gb:NM_014765.1 </td> <td> NM_014765 </td> <td> translocase of outer mitochondrial membrane 20 homolog (yeast) </td> <td> TOMM20 </td> <td> 9804 </td> <td> NM_014765 </td> <td> 0006605 // protein targeting // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from direct assay /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071806 // protein transmembrane transport // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // non-traceable author statement /// 0005742 // mitochondrial outer membrane translocase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from direct assay </td> <td> 80.33 </td> <td> 549.04 </td> <td> 2.17 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 202139_at </td> <td> 202139_at </td> <td> NM_003689 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003689.1 /DEF=Homo sapiens aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) (AKR7A2), mRNA.  /FEA=mRNA /GEN=AKR7A2 /PROD=aldo-keto reductase family 7, member A2(aflatoxin aldehyde reductase) /DB_XREF=gi:4502020 /UG=Hs.6980 aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) /FL=gb:BC004111.1 gb:AF026947.1 gb:NM_003689.1 </td> <td> NM_003689 </td> <td> aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) </td> <td> AKR7A2 </td> <td> 8574 </td> <td> NM_003689 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006081 // cellular aldehyde metabolic process // traceable author statement /// 0044597 // daunorubicin metabolic process // inferred from mutant phenotype /// 0044598 // doxorubicin metabolic process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004032 // alditol:NADP+ 1-oxidoreductase activity // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019119 // phenanthrene-9,10-epoxide hydrolase activity // inferred from direct assay </td> <td> 26.60 </td> <td> 116.72 </td> <td> 2.17 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 213887_s_at </td> <td> 213887_s_at </td> <td> AI554759 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI554759 /FEA=EST /DB_XREF=gi:4487122 /DB_XREF=est:tn30e02.x1 /CLONE=IMAGE:2169146 /UG=Hs.24301 polymerase (RNA) II (DNA directed) polypeptide E (25kD) </td> <td> AI554759 </td> <td> polymerase (RNA) II (DNA directed) polypeptide E, 25kDa </td> <td> POLR2E </td> <td> 5434 </td> <td> NM_002695 /// XM_005259579 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0005666 // DNA-directed RNA polymerase III complex // not recorded /// 0005736 // DNA-directed RNA polymerase I complex // not recorded /// 0005829 // cytosol // traceable author statement </td> <td> 0001054 // RNA polymerase I activity // not recorded /// 0001055 // RNA polymerase II activity // not recorded /// 0001056 // RNA polymerase III activity // not recorded /// 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -75.58 </td> <td> 330.51 </td> <td> -2.17 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 40016_g_at </td> <td> 40016_g_at </td> <td> AB002301 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AB002301:Human mRNA for KIAA0303 gene, partial cds /cds=(0,6415) /gb=AB002301 /gi=2224546 /ug=Hs.54985 /len=6629 </td> <td> AB002301 </td> <td> microtubule associated serine/threonine kinase family member 4 </td> <td> MAST4 </td> <td> 375449 </td> <td> NM_001164664 /// NM_001290226 /// NM_001290227 /// NM_001290228 /// NM_015183 /// NM_198828 /// XM_005248498 /// XM_006714602 /// XM_006714603 /// XM_006714604 /// XM_006714605 /// XM_006714606 /// XM_006714607 /// XM_006714608 /// XM_006714609 /// XM_006714610 /// XM_006714611 /// XM_006714612 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -56.35 </td> <td> 358.57 </td> <td> -2.17 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201293_x_at </td> <td> 201293_x_at </td> <td> NM_021130 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021130.1 /DEF=Homo sapiens peptidylprolyl isomerase A (cyclophilin A) (PPIA), mRNA.  /FEA=mRNA /GEN=PPIA /PROD=peptidylprolyl isomerase A (cyclophilin A) /DB_XREF=gi:10863926 /UG=Hs.182937 peptidylprolyl isomerase A (cyclophilin A) /FL=gb:NM_021130.1 gb:BC000689.1 gb:BC005320.1 </td> <td> NM_021130 </td> <td> peptidyl-prolyl cis-trans isomerase A-like /// peptidylprolyl isomerase A (cyclophilin A) </td> <td> LOC101060363 /// PPIA </td> <td> 5478 /// 101060363 </td> <td> NM_021130 /// NM_203430 /// NM_203431 /// XM_003960117 /// XM_005246048 /// XM_005249791 /// XM_005275876 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0002576 // platelet degranulation // traceable author statement /// 0006278 // RNA-dependent DNA replication // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019061 // uncoating of virus // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019076 // viral release from host cell // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030260 // entry into host cell // traceable author statement /// 0034389 // lipid particle organization // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // traceable author statement /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0075713 // establishment of integrated proviral latency // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046790 // virion binding // non-traceable author statement /// 0051082 // unfolded protein binding // traceable author statement </td> <td> -1102.32 </td> <td> 5036.44 </td> <td> -2.17 </td> <td> 0.06 </td> <td> 0.10 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200781_s_at </td> <td> 200781_s_at </td> <td> NM_001019 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001019.1 /DEF=Homo sapiens ribosomal protein S15a (RPS15A), mRNA. /FEA=mRNA /GEN=RPS15A /PROD=ribosomal protein S15a /DB_XREF=gi:4506688 /UG=Hs.2953 ribosomal protein S15a /FL=gb:BC001697.1 gb:NM_001019.1 </td> <td> NM_001019 </td> <td> ribosomal protein S15a </td> <td> RPS15A </td> <td> 6210 </td> <td> NM_001019 /// NM_001030009 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0009615 // response to virus // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045787 // positive regulation of cell cycle // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -537.27 </td> <td> 3018.91 </td> <td> -2.17 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201101_s_at </td> <td> 201101_s_at </td> <td> BE963370 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE963370 /FEA=EST /DB_XREF=gi:11766788 /DB_XREF=est:601657132R1 /CLONE=IMAGE:3866335 /UG=Hs.80338 KIAA0164 gene product /FL=gb:D79986.1 gb:NM_014739.1 </td> <td> BE963370 </td> <td> BCL2-associated transcription factor 1 </td> <td> BCLAF1 </td> <td> 9774 </td> <td> NM_001077440 /// NM_001077441 /// NM_014739 /// XM_005267236 /// XM_005267237 /// XM_005267238 /// XM_005267239 /// XR_245558 /// XR_245559 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043620 // regulation of DNA-templated transcription in response to stress // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // traceable author statement /// 2000144 // positive regulation of DNA-templated transcription, initiation // inferred from mutant phenotype /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 67.43 </td> <td> 183.24 </td> <td> 2.17 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 203107_x_at </td> <td> 203107_x_at </td> <td> NM_002952 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002952.1 /DEF=Homo sapiens ribosomal protein S2 (RPS2), mRNA. /FEA=mRNA /GEN=RPS2 /PROD=ribosomal protein S2 /DB_XREF=gi:4506718 /UG=Hs.182426 ribosomal protein S2 /FL=gb:BC001795.1 gb:NM_002952.1 </td> <td> NM_002952 </td> <td> ribosomal protein S2 /// small nucleolar RNA, H/ACA box 64 </td> <td> RPS2 /// SNORA64 </td> <td> 6187 /// 26784 </td> <td> NM_002952 /// NR_002326 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051347 // positive regulation of transferase activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1570.82 </td> <td> 5173.36 </td> <td> -2.16 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201485_s_at </td> <td> 201485_s_at </td> <td> BC004892 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004892.1 /DEF=Homo sapiens, reticulocalbin 2, EF-hand calcium binding domain, clone MGC:1650, mRNA, complete cds.  /FEA=mRNA /PROD=reticulocalbin 2, EF-hand calcium bindingdomain /DB_XREF=gi:13436151 /UG=Hs.79088 reticulocalbin 2, EF-hand calcium binding domain /FL=gb:BC004892.1 gb:NM_002902.1 </td> <td> BC004892 </td> <td> reticulocalbin 2, EF-hand calcium binding domain </td> <td> RCN2 </td> <td> 5955 </td> <td> NM_001271837 /// NM_002902 </td> <td>  </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 33.77 </td> <td> 258.44 </td> <td> 2.16 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 211986_at </td> <td> 211986_at </td> <td> BG287862 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG287862 /FEA=EST /DB_XREF=gi:13042118 /DB_XREF=est:602387619F1 /CLONE=IMAGE:4516588 /UG=Hs.301417 AHNAK nucleoprotein (desmoyokin) </td> <td> BG287862 </td> <td> AHNAK nucleoprotein </td> <td> AHNAK </td> <td> 79026 </td> <td> NM_001620 /// NM_024060 /// XM_005274240 /// XM_005274241 /// XM_005274242 /// XM_005274243 /// XM_005274244 /// XM_005274245 /// XM_005274246 /// XM_006718686 /// XM_006718687 /// XM_006718688 </td> <td> 0007399 // nervous system development // non-traceable author statement /// 0043484 // regulation of RNA splicing // inferred from sequence or structural similarity /// 0051259 // protein oligomerization // inferred from sequence or structural similarity /// 1901385 // regulation of voltage-gated calcium channel activity // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030315 // T-tubule // non-traceable author statement /// 0031982 // vesicle // inferred from direct assay /// 0042383 // sarcolemma // inferred from direct assay /// 0042383 // sarcolemma // non-traceable author statement /// 0043034 // costamere // inferred from sequence or structural similarity /// 0044291 // cell-cell contact zone // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0097493 // structural molecule activity conferring elasticity // inferred from sequence or structural similarity </td> <td> 139.10 </td> <td> 512.02 </td> <td> 2.16 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212696_s_at </td> <td> 212696_s_at </td> <td> BF968633 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF968633 /FEA=EST /DB_XREF=gi:12335848 /DB_XREF=est:602271068F1 /CLONE=IMAGE:4359209 /UG=Hs.66394 ring finger protein 4 </td> <td> BF968633 </td> <td> ring finger protein 4 </td> <td> RNF4 </td> <td> 6047 </td> <td> NM_001185009 /// NM_001185010 /// NM_002938 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046685 // response to arsenic-containing substance // inferred from direct assay /// 0051865 // protein autoubiquitination // inferred from sequence or structural similarity /// 0070534 // protein K63-linked ubiquitination // inferred from sequence or structural similarity /// 0070936 // protein K48-linked ubiquitination // inferred from sequence or structural similarity /// 0070979 // protein K11-linked ubiquitination // inferred from sequence or structural similarity /// 0085020 // protein K6-linked ubiquitination // inferred from sequence or structural similarity /// 0090169 // regulation of spindle assembly // inferred from mutant phenotype /// 0090234 // regulation of kinetochore assembly // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016605 // PML body // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0004842 // ubiquitin-protein transferase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from electronic annotation /// 0031491 // nucleosome binding // inferred from sequence or structural similarity /// 0032184 // SUMO polymer binding // inferred from sequence or structural similarity /// 0033142 // progesterone receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // non-traceable author statement </td> <td> -60.33 </td> <td> 319.36 </td> <td> -2.16 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 218211_s_at </td> <td> 218211_s_at </td> <td> NM_024101 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024101.1 /DEF=Homo sapiens hypothetical protein MGC2771 (MGC2771), mRNA. /FEA=mRNA /GEN=MGC2771 /PROD=hypothetical protein MGC2771 /DB_XREF=gi:13129107 /UG=Hs.321130 hypothetical protein MGC2771 /FL=gb:BC001653.1 gb:NM_024101.1 </td> <td> NM_024101 </td> <td> melanophilin </td> <td> MLPH </td> <td> 79083 </td> <td> NM_001042467 /// NM_001281473 /// NM_001281474 /// NM_024101 /// NR_104019 /// XM_006712737 /// XM_006712738 /// XM_006712739 /// XM_006712740 /// XM_006712741 /// XM_006712742 </td> <td> 0006605 // protein targeting // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0035371 // microtubule plus-end // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0031489 // myosin V binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from electronic annotation </td> <td> -34.55 </td> <td> 92.70 </td> <td> -2.16 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 219506_at </td> <td> 219506_at </td> <td> NM_024579 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024579.1 /DEF=Homo sapiens hypothetical protein FLJ23221 (FLJ23221), mRNA. /FEA=mRNA /GEN=FLJ23221 /PROD=hypothetical protein FLJ23221 /DB_XREF=gi:13375757 /UG=Hs.18397 hypothetical protein FLJ23221 /FL=gb:NM_024579.1 </td> <td> NM_024579 </td> <td> chromosome 1 open reading frame 54 </td> <td> C1orf54 </td> <td> 79630 </td> <td> NM_024579 /// XM_005245488 /// XM_006711538 /// XM_006711539 /// XM_006711540 </td> <td>  </td> <td> 0005576 // extracellular region // inferred from electronic annotation </td> <td>  </td> <td> 39.60 </td> <td> 247.40 </td> <td> 2.15 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 209433_s_at </td> <td> 209433_s_at </td> <td> AI457120 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI457120 /FEA=EST /DB_XREF=gi:4309989 /DB_XREF=est:tl72b10.x1 /CLONE=IMAGE:2152603 /UG=Hs.311 phosphoribosyl pyrophosphate amidotransferase /FL=gb:U00238.1 </td> <td> AI457120 </td> <td> phosphoribosyl pyrophosphate amidotransferase </td> <td> PPAT </td> <td> 5471 </td> <td> NM_002703 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // traceable author statement /// 0006189 // 'de novo' IMP biosynthetic process // inferred from electronic annotation /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0006543 // glutamine catabolic process // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009113 // purine nucleobase biosynthetic process // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0019693 // ribose phosphate metabolic process // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004044 // amidophosphoribosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation </td> <td> 28.80 </td> <td> 110.72 </td> <td> 2.15 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 205315_s_at </td> <td> 205315_s_at </td> <td> NM_006750 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006750.1 /DEF=Homo sapiens syntrophin, beta 2 (dystrophin-associated protein A1, 59kD, basic component 2) (SNTB2), mRNA.  /FEA=mRNA /GEN=SNTB2 /PROD=syntrophin, beta 2 (dystrophin-associatedprotein A1, 59kD, basic component 2) /DB_XREF=gi:5803176 /UG=Hs.172278 syntrophin, beta 2 (dystrophin-associated protein A1, 59kD, basic component 2) /FL=gb:U40572.1 gb:NM_006750.1 </td> <td> NM_006750 </td> <td> syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) </td> <td> SNTB2 </td> <td> 6645 </td> <td> NM_006750 /// NM_130845 /// XM_005256120 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016010 // dystrophin-associated glycoprotein complex // traceable author statement /// 0016020 // membrane // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 42.80 </td> <td> 256.95 </td> <td> 2.15 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 213421_x_at </td> <td> 213421_x_at </td> <td> AW007273 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW007273 /FEA=EST /DB_XREF=gi:5856051 /DB_XREF=est:wt54d10.x1 /CLONE=IMAGE:2511283 /UG=Hs.58247 protease, serine, 4 (trypsin 4, brain) </td> <td> AW007273 </td> <td> protease, serine, 3 </td> <td> PRSS3 </td> <td> 5646 </td> <td> NM_001197097 /// NM_001197098 /// NM_002771 /// NM_007343 /// XM_005251519 </td> <td> 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // non-traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0007586 // digestion // traceable author statement /// 0009235 // cobalamin metabolic process // traceable author statement /// 0031638 // zymogen activation // inferred from direct assay /// 0043542 // endothelial cell migration // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -34.15 </td> <td> 129.05 </td> <td> -2.15 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200918_s_at </td> <td> 200918_s_at </td> <td> NM_003139 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003139.1 /DEF=Homo sapiens signal recognition particle receptor (docking protein) (SRPR), mRNA.  /FEA=mRNA /GEN=SRPR /PROD=signal recognition particle receptor (dockingprotein) /DB_XREF=gi:4507222 /UG=Hs.75730 signal recognition particle receptor (docking protein) /FL=gb:BC001162.1 gb:NM_003139.1 </td> <td> NM_003139 </td> <td> signal recognition particle receptor (docking protein) </td> <td> SRPR </td> <td> 6734 </td> <td> NM_001177842 /// NM_003139 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005785 // signal recognition particle receptor complex // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005047 // signal recognition particle binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 33.53 </td> <td> 405.56 </td> <td> 2.15 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200657_at </td> <td> 200657_at </td> <td> NM_001152 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001152.1 /DEF=Homo sapiens solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 (SLC25A5), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=SLC25A5 /PROD=solute carrier family 25 (mitochondrial carrier;adenine nucleotide translocator), member 5 /DB_XREF=gi:4502098 /UG=Hs.79172 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 /FL=gb:J02683.1 gb:NM_001152.1 </td> <td> NM_001152 </td> <td> solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 </td> <td> SLC25A5 </td> <td> 292 </td> <td> NM_001152 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0015853 // adenine transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 1901029 // negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071817 // MMXD complex // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015207 // adenine transmembrane transporter activity // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -352.38 </td> <td> 1752.21 </td> <td> -2.15 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 217691_x_at </td> <td> 217691_x_at </td> <td> AA853175 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA853175 /FEA=EST /DB_XREF=gi:2939914 /DB_XREF=est:NHTBCae03g02r1 /CLONE=NHTBCae03g02 /UG=Hs.333049 Homo sapiens similar to solute carrier family 16 (monocarboxylic acid transporters), member 3 (H. sapiens) (LOC65816), mRNA </td> <td> AA853175 </td> <td> microRNA 6787 /// solute carrier family 16 (monocarboxylate transporter), member 3 </td> <td> MIR6787 /// SLC16A3 </td> <td> 9123 /// 102465472 </td> <td> NM_001042422 /// NM_001042423 /// NM_001206950 /// NM_001206951 /// NM_001206952 /// NM_004207 /// NR_106845 </td> <td> 0006090 // pyruvate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -47.00 </td> <td> 133.28 </td> <td> -2.15 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 214693_x_at </td> <td> 214693_x_at </td> <td> BE732345 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE732345 /FEA=EST /DB_XREF=gi:10146337 /DB_XREF=est:601566954F1 /CLONE=IMAGE:3841692 /UG=Hs.41569 phosphatidic acid phosphatase type 2A </td> <td> BE732345 </td> <td> neuroblastoma breakpoint family, member 10 /// neuroblastoma breakpoint family, member 14 /// neuroblastoma breakpoint family, member 26 /// neuroblastoma breakpoint family, member 9 </td> <td> NBPF10 /// NBPF14 /// NBPF26 /// NBPF9 </td> <td> 25832 /// 400818 /// 100132406 /// 101060684 </td> <td> NM_001037675 /// NM_001039703 /// NM_001277444 /// NM_015383 /// XM_003960230 /// XM_005276139 /// XM_005276140 /// XM_005277503 /// XM_005277504 /// XM_005277505 /// XM_006711091 /// XM_006711092 /// XM_006711093 /// XM_006711094 /// XM_006711095 /// XM_006711096 /// XM_006711265 /// XM_006711317 /// XM_006726340 /// XM_006726341 /// XM_006726342 /// XM_006726343 /// XM_006726344 /// XM_006726345 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -84.95 </td> <td> 202.80 </td> <td> -2.15 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 208956_x_at </td> <td> 208956_x_at </td> <td> U62891 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U62891.1 /DEF=Human deoxyuridine triphosphatase (DUT) mRNA, complete cds. /FEA=mRNA /GEN=DUT /PROD=deoxyuridine triphosphatase /DB_XREF=gi:1421817 /UG=Hs.82113 dUTP pyrophosphatase /FL=gb:AB049113.1 gb:U31930.1 gb:U62891.1 gb:M89913.1 gb:NM_001948.1 </td> <td> U62891 </td> <td> deoxyuridine triphosphatase </td> <td> DUT </td> <td> 1854 </td> <td> NM_001025248 /// NM_001025249 /// NM_001948 /// XM_005254211 </td> <td> 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006206 // pyrimidine nucleobase metabolic process // traceable author statement /// 0006226 // dUMP biosynthetic process // inferred from electronic annotation /// 0006260 // DNA replication // traceable author statement /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046080 // dUTP metabolic process // inferred from electronic annotation /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004170 // dUTP diphosphatase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 31.90 </td> <td> 463.25 </td> <td> 2.15 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 214352_s_at </td> <td> 214352_s_at </td> <td> BF673699 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF673699 /FEA=EST /DB_XREF=gi:11947594 /DB_XREF=est:602136427F1 /CLONE=IMAGE:4272774 /UG=Hs.184050 v-Ki-ras2 Kirsten rat sarcoma 2 viral oncogene homolog </td> <td> BF673699 </td> <td> Kirsten rat sarcoma viral oncogene homolog </td> <td> KRAS </td> <td> 3845 </td> <td> NM_004985 /// NM_033360 /// XM_006719069 </td> <td> 0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007569 // cell aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008542 // visual learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0035022 // positive regulation of Rac protein signal transduction // inferred from electronic annotation /// 0035176 // social behavior // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051385 // response to mineralocorticoid // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0097193 // intrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019002 // GMP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation /// 0030275 // LRR domain binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from direct assay </td> <td> 65.33 </td> <td> 207.71 </td> <td> 2.15 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 202352_s_at </td> <td> 202352_s_at </td> <td> AI446530 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI446530 /FEA=EST /DB_XREF=gi:4295855 /DB_XREF=est:tj05b01.x1 /CLONE=IMAGE:2140585 /UG=Hs.4295 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 /FL=gb:AB003103.1 gb:NM_002816.1 </td> <td> AI446530 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 </td> <td> PSMD12 </td> <td> 5718 </td> <td> NM_002816 /// NM_174871 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005838 // proteasome regulatory particle // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 59.87 </td> <td> 295.66 </td> <td> 2.15 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212008_at </td> <td> 212008_at </td> <td> N29889 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N29889 /FEA=EST /DB_XREF=gi:1148409 /DB_XREF=est:yy11e11.s1 /CLONE=IMAGE:270956 /UG=Hs.77495 UBX domain-containing 1 </td> <td> N29889 </td> <td> UBX domain protein 4 </td> <td> UBXN4 </td> <td> 23190 </td> <td> NM_014607 /// XM_006712370 </td> <td> 0006986 // response to unfolded protein // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -37.65 </td> <td> 156.07 </td> <td> -2.15 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 218309_at </td> <td> 218309_at </td> <td> NM_018584 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018584.1 /DEF=Homo sapiens hypothetical protein PRO1489 (PRO1489), mRNA. /FEA=mRNA /GEN=PRO1489 /PROD=hypothetical protein PRO1489 /DB_XREF=gi:8924051 /UG=Hs.107767 hypothetical protein PRO1489 /FL=gb:AF116637.1 gb:NM_018584.1 </td> <td> NM_018584 </td> <td> calcium/calmodulin-dependent protein kinase II inhibitor 1 </td> <td> CAMK2N1 </td> <td> 55450 </td> <td> NM_018584 </td> <td> 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0004860 // protein kinase inhibitor activity // inferred from electronic annotation /// 0008427 // calcium-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation </td> <td> 73.72 </td> <td> 306.99 </td> <td> 2.15 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212931_at </td> <td> 212931_at </td> <td> AB006630 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB006630.1 /DEF=Homo sapiens mRNA for KIAA0292 gene, partial cds. /FEA=mRNA /GEN=KIAA0292 /DB_XREF=gi:2564331 /UG=Hs.201668 transcription factor 20 (AR1) </td> <td> AB006630 </td> <td> transcription factor 20 (AR1) </td> <td> TCF20 </td> <td> 6942 </td> <td> NM_005650 /// NM_181492 /// XM_005261722 /// XM_005261723 /// XM_005261724 /// XM_005276955 /// XM_005276956 /// XM_005276957 /// XM_006724313 /// XM_006724314 /// XM_006725781 /// XM_006725782 /// XM_006725783 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -27.07 </td> <td> 83.94 </td> <td> -2.14 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212107_s_at </td> <td> 212107_s_at </td> <td> BE561014 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE561014 /FEA=EST /DB_XREF=gi:9804734 /DB_XREF=est:601344618F1 /CLONE=IMAGE:3677500 /UG=Hs.74578 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 9 (RNA helicase A, nuclear DNA helicase II; leukophysin) </td> <td> BE561014 </td> <td> DEAH (Asp-Glu-Ala-His) box helicase 9 </td> <td> DHX9 </td> <td> 1660 </td> <td> NM_001357 /// NM_030588 /// NR_033302 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032508 // DNA duplex unwinding // traceable author statement /// 0034605 // cellular response to heat // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -31.17 </td> <td> 100.81 </td> <td> -2.14 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 205020_s_at </td> <td> 205020_s_at </td> <td> NM_005738 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005738.1 /DEF=Homo sapiens ADP-ribosylation factor-like 4 (ARL4), mRNA. /FEA=mRNA /GEN=ARL4 /PROD=ADP-ribosylation factor-like 4 /DB_XREF=gi:5031602 /UG=Hs.201672 ADP-ribosylation factor-like 4 /FL=gb:U73960.1 gb:NM_005738.1 </td> <td> NM_005738 </td> <td> ADP-ribosylation factor-like 4A </td> <td> ARL4A </td> <td> 10124 </td> <td> NM_001037164 /// NM_001195396 /// NM_005738 /// NM_212460 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay </td> <td> -50.37 </td> <td> 99.19 </td> <td> -2.14 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 218230_at </td> <td> 218230_at </td> <td> AL044651 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL044651 /FEA=EST /DB_XREF=gi:5432866 /DB_XREF=est:DKFZp434P082_s1 /CLONE=DKFZp434P082 /UG=Hs.301064 arfaptin 1 /FL=gb:U52521.1 gb:NM_014447.1 </td> <td> AL044651 </td> <td> ADP-ribosylation factor interacting protein 1 </td> <td> ARFIP1 </td> <td> 27236 </td> <td> NM_001025593 /// NM_001025595 /// NM_001287431 /// NM_001287432 /// NM_001287433 /// NM_014447 </td> <td> 0006886 // intracellular protein transport // inferred from direct assay /// 0050708 // regulation of protein secretion // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay </td> <td> 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> 41.05 </td> <td> 110.03 </td> <td> 2.14 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 206303_s_at </td> <td> 206303_s_at </td> <td> AF191653 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF191653.1 /DEF=Homo sapiens diphosphoinositol polyphosphate phosphohydrolase type 2 beta (NUDT4) mRNA, complete cds.  /FEA=mRNA /GEN=NUDT4 /PROD=diphosphoinositol polyphosphate phosphohydrolasetype 2 beta /DB_XREF=gi:7739471 /UG=Hs.92381 nudix (nucleoside diphosphate linked moiety X)-type motif 4 /FL=gb:NM_019094.1 gb:AF191649.1 gb:AF191650.1 gb:AF191653.1 </td> <td> AF191653 </td> <td> nudix (nucleoside diphosphate linked moiety X)-type motif 4 /// nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1 /// nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 2 </td> <td> NUDT4 /// NUDT4P1 /// NUDT4P2 </td> <td> 11163 /// 170688 /// 440672 </td> <td> NM_019094 /// NM_199040 /// NR_002212 /// NR_104005 /// XM_005268595 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0009187 // cyclic nucleotide metabolic process // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0019935 // cyclic-nucleotide-mediated signaling // traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046831 // regulation of RNA export from nucleus // traceable author statement /// 0046907 // intracellular transport // traceable author statement </td> <td> 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030515 // snoRNA binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050072 // m7G(5')pppN diphosphatase activity // inferred from sequence or structural similarity /// 0052840 // inositol diphosphate tetrakisphosphate diphosphatase activity // traceable author statement /// 0052841 // inositol bisdiphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052842 // inositol diphosphate pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052843 // inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052844 // inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052845 // inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052846 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity // inferred from electronic annotation /// 0052847 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation /// 0052848 // inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation </td> <td> 135.88 </td> <td> 452.49 </td> <td> 2.14 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 221492_s_at </td> <td> 221492_s_at </td> <td> AF202092 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF202092.1 /DEF=Homo sapiens PC3-96 mRNA, complete cds. /FEA=mRNA /PROD=PC3-96 /DB_XREF=gi:11493699 /UG=Hs.26367 PC3-96 protein /FL=gb:AF202092.1 </td> <td> AF202092 </td> <td> autophagy related 3 </td> <td> ATG3 </td> <td> 64422 </td> <td> NM_001278712 /// NM_022488 </td> <td> 0000045 // autophagic vacuole assembly // not recorded /// 0000045 // autophagic vacuole assembly // inferred from sequence or structural similarity /// 0000422 // mitochondrion degradation //  /// 0006464 // cellular protein modification process // inferred from direct assay /// 0006501 // C-terminal protein lipidation // not recorded /// 0006612 // protein targeting to membrane // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from sequence or structural similarity /// 0044804 // nucleophagy //  /// 1902017 // regulation of cilium assembly // inferred from sequence or structural similarity </td> <td> 0000153 // cytoplasmic ubiquitin ligase complex // inferred from physical interaction /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0019776 // Atg8 ligase activity // not recorded /// 0019776 // Atg8 ligase activity // inferred from sequence or structural similarity /// 0019777 // Atg12 ligase activity // inferred from sequence or structural similarity /// 0019787 // small conjugating protein ligase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> 57.95 </td> <td> 232.97 </td> <td> 2.13 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 218353_at </td> <td> 218353_at </td> <td> NM_025226 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025226.1 /DEF=Homo sapiens MSTP032 protein (MSTP032), mRNA. /FEA=mRNA /GEN=MSTP032 /PROD=MSTP032 protein /DB_XREF=gi:13376831 /UG=Hs.274368 MSTP032 protein /FL=gb:AF113212.1 gb:NM_025226.1 </td> <td> NM_025226 </td> <td> regulator of G-protein signaling 5 </td> <td> RGS5 </td> <td> 8490 </td> <td> NM_001195303 /// NM_001254748 /// NM_001254749 /// NM_003617 /// NM_025226 /// NR_045630 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // not recorded </td> <td> 88.75 </td> <td> 919.85 </td> <td> 2.13 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201560_at </td> <td> 201560_at </td> <td> NM_013943 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013943.1 /DEF=Homo sapiens chloride intracellular channel 4 (CLIC4), mRNA. /FEA=mRNA /GEN=CLIC4 /PROD=chloride intracellular channel 4 /DB_XREF=gi:7330334 /UG=Hs.25035 chloride intracellular channel 4 /FL=gb:AF109196.1 gb:AF097330.1 gb:AL117424.1 gb:NM_013943.1 </td> <td> NM_013943 </td> <td> chloride intracellular channel 4 </td> <td> CLIC4 </td> <td> 25932 </td> <td> NM_013943 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001886 // endothelial cell morphogenesis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // non-traceable author statement /// 0007035 // vacuolar acidification // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030216 // keratinocyte differentiation // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // non-traceable author statement /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // non-traceable author statement /// 0061299 // retina vasculature morphogenesis in camera-type eye // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from mutant phenotype /// 1902476 // chloride transmembrane transport // inferred from electronic annotation /// 1902476 // chloride transmembrane transport // traceable author statement </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005902 // microvillus // inferred from direct assay /// 0005911 // cell-cell junction // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0015629 // actin cytoskeleton // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 94.82 </td> <td> 917.11 </td> <td> 2.13 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 214214_s_at </td> <td> 214214_s_at </td> <td> AU151801 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU151801 /FEA=EST /DB_XREF=gi:11013322 /DB_XREF=est:AU151801 /CLONE=NT2RP2006128 /UG=Hs.78614 complement component 1, q subcomponent binding protein </td> <td> AU151801 </td> <td> complement component 1, q subcomponent binding protein </td> <td> C1QBP </td> <td> 708 </td> <td> NM_001212 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002376 // immune system process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007597 // blood coagulation, intrinsic pathway // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase signaling // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030449 // regulation of complement activation // inferred from direct assay /// 0032689 // negative regulation of interferon-gamma production // inferred from direct assay /// 0032695 // negative regulation of interleukin-12 production // inferred from direct assay /// 0039534 // negative regulation of MDA-5 signaling pathway // inferred from direct assay /// 0039536 // negative regulation of RIG-I signaling pathway // inferred from direct assay /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042256 // mature ribosome assembly // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from mutant phenotype /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0050687 // negative regulation of defense response to virus // inferred from mutant phenotype /// 0051897 // positive regulation of protein kinase B signaling // inferred from mutant phenotype /// 0070131 // positive regulation of mitochondrial translation // inferred from sequence or structural similarity /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from direct assay /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from mutant phenotype /// 1901165 // positive regulation of trophoblast cell migration // inferred from mutant phenotype /// 2000510 // positive regulation of dendritic cell chemotaxis // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0001849 // complement component C1q binding // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003729 // mRNA binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005540 // hyaluronic acid binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from direct assay /// 0030984 // kininogen binding // inferred from direct assay /// 0031690 // adrenergic receptor binding // inferred from sequence or structural similarity /// 0097177 // mitochondrial ribosome binding // inferred from sequence or structural similarity </td> <td> 60.90 </td> <td> 314.90 </td> <td> 2.13 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201992_s_at </td> <td> 201992_s_at </td> <td> NM_004521 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004521.1 /DEF=Homo sapiens kinesin family member 5B (KIF5B), mRNA. /FEA=mRNA /GEN=KIF5B /PROD=kinesin family member 5B /DB_XREF=gi:4758647 /UG=Hs.149436 kinesin family member 5B /FL=gb:NM_004521.1 </td> <td> NM_004521 </td> <td> kinesin family member 5B </td> <td> KIF5B </td> <td> 3799 </td> <td> NM_004521 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007018 // microtubule-based movement // traceable author statement /// 0007028 // cytoplasm organization // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0035617 // stress granule disassembly // inferred from sequence or structural similarity /// 0042391 // regulation of membrane potential // inferred from direct assay /// 0043268 // positive regulation of potassium ion transport // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0047496 // vesicle transport along microtubule // inferred from sequence or structural similarity /// 0090004 // positive regulation of establishment of protein localization to plasma membrane // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043227 // membrane-bounded organelle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -80.08 </td> <td> 246.71 </td> <td> -2.12 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 210958_s_at </td> <td> 210958_s_at </td> <td> BC003646 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003646.1 /DEF=Homo sapiens, clone MGC:4693, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:4693) /DB_XREF=gi:13177744 /UG=Hs.54985 KIAA0303 protein /FL=gb:BC003646.1 </td> <td> BC003646 </td> <td> microtubule associated serine/threonine kinase family member 4 </td> <td> MAST4 </td> <td> 375449 </td> <td> NM_001164664 /// NM_001290226 /// NM_001290227 /// NM_001290228 /// NM_015183 /// NM_198828 /// XM_005248498 /// XM_006714602 /// XM_006714603 /// XM_006714604 /// XM_006714605 /// XM_006714606 /// XM_006714607 /// XM_006714608 /// XM_006714609 /// XM_006714610 /// XM_006714611 /// XM_006714612 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -37.22 </td> <td> 182.01 </td> <td> -2.12 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201300_s_at </td> <td> 201300_s_at </td> <td> NM_000311 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000311.1 /DEF=Homo sapiens prion protein (p27-30) (Creutzfeld-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia) (PRNP), mRNA.  /FEA=mRNA /GEN=PRNP /PROD=prion protein /DB_XREF=gi:4506112 /UG=Hs.74621 prion protein (p27-30) (Creutzfeld-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia) /FL=gb:AY008282.1 gb:M13899.1 gb:NM_000311.1 </td> <td> NM_000311 </td> <td> prion protein </td> <td> PRNP </td> <td> 5621 </td> <td> NM_000311 /// NM_001080121 /// NM_001080122 /// NM_001080123 /// NM_001271561 /// NM_183079 </td> <td> 0001933 // negative regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0006878 // cellular copper ion homeostasis // non-traceable author statement /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007611 // learning or memory // inferred from electronic annotation /// 0008152 // metabolic process // traceable author statement /// 0032689 // negative regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032700 // negative regulation of interleukin-17 production // inferred from sequence or structural similarity /// 0032703 // negative regulation of interleukin-2 production // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0046007 // negative regulation of activated T cell proliferation // inferred from sequence or structural similarity /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0070885 // negative regulation of calcineurin-NFAT signaling cascade // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // traceable author statement /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045121 // membrane raft // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005507 // copper ion binding // inferred from direct assay /// 0005507 // copper ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0015631 // tubulin binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0043008 // ATP-dependent protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation </td> <td> 85.20 </td> <td> 406.23 </td> <td> 2.12 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212895_s_at </td> <td> 212895_s_at </td> <td> AL527773 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL527773 /FEA=EST /DB_XREF=gi:12791266 /DB_XREF=est:AL527773 /CLONE=CS0DC026YF10 (3 prime) /UG=Hs.118021 active BCR-related gene </td> <td> AL527773 </td> <td> active BCR-related </td> <td> ABR </td> <td> 29 </td> <td> NM_001092 /// NM_001159746 /// NM_001256847 /// NM_001282149 /// NM_021962 /// XM_006721506 /// XM_006721507 /// XM_006721508 /// XM_006721509 /// XM_006721510 /// XM_006721511 /// XM_006721512 /// XM_006725292 /// XM_006725293 /// XM_006725294 /// XM_006725295 /// XM_006725296 /// XM_006725297 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043314 // negative regulation of neutrophil degranulation // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030675 // Rac GTPase activator activity // inferred from electronic annotation </td> <td> -33.68 </td> <td> 169.34 </td> <td> -2.12 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 213044_at </td> <td> 213044_at </td> <td> N22548 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N22548 /FEA=EST /DB_XREF=gi:1128682 /DB_XREF=est:yw30c06.s1 /CLONE=IMAGE:253738 /UG=Hs.17820 Rho-associated, coiled-coil containing protein kinase 1 </td> <td> N22548 </td> <td> Rho-associated, coiled-coil containing protein kinase 1 </td> <td> ROCK1 </td> <td> 6093 </td> <td> NM_005406 </td> <td> 0003383 // apical constriction // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0006939 // smooth muscle contraction // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0022614 // membrane to membrane docking // inferred from direct assay /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // traceable author statement /// 0032060 // bleb assembly // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // traceable author statement /// 0032970 // regulation of actin filament-based process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045616 // regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0050900 // leukocyte migration // inferred from direct assay /// 0050901 // leukocyte tethering or rolling // inferred from direct assay /// 0051451 // myoblast migration // inferred from sequence or structural similarity /// 0051492 // regulation of stress fiber assembly // traceable author statement /// 0051893 // regulation of focal adhesion assembly // traceable author statement /// 0051894 // positive regulation of focal adhesion assembly // inferred from sequence or structural similarity /// 2000114 // regulation of establishment of cell polarity // traceable author statement /// 2000145 // regulation of cell motility // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0001726 // ruffle // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005814 // centriole // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0032059 // bleb // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -57.78 </td> <td> 494.34 </td> <td> -2.12 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 202083_s_at </td> <td> 202083_s_at </td> <td> AI017770 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI017770 /FEA=EST /DB_XREF=gi:3232106 /DB_XREF=est:ov32b12.x1 /CLONE=IMAGE:1639007 /UG=Hs.75232 SEC14 (S. cerevisiae)-like 1 /FL=gb:D67029.1 gb:NM_003003.1 </td> <td> AI017770 </td> <td> SEC14-like 1 (S. cerevisiae) </td> <td> SEC14L1 </td> <td> 6397 </td> <td> NM_001039573 /// NM_001143998 /// NM_001143999 /// NM_001144001 /// NM_001204408 /// NM_001204410 /// NM_003003 </td> <td> 0006810 // transport // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -47.75 </td> <td> 179.30 </td> <td> -2.12 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201809_s_at </td> <td> 201809_s_at </td> <td> NM_000118 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000118.1 /DEF=Homo sapiens endoglin (Osler-Rendu-Weber syndrome 1) (ENG), mRNA. /FEA=mRNA /GEN=ENG /PROD=endoglin precursor /DB_XREF=gi:4557554 /UG=Hs.76753 endoglin (Osler-Rendu-Weber syndrome 1) /FL=gb:NM_000118.1 </td> <td> NM_000118 </td> <td> endoglin </td> <td> ENG </td> <td> 2022 </td> <td> NM_000118 /// NM_001114753 /// NM_001278138 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001300 // chronological cell aging // inferred from electronic annotation /// 0001300 // chronological cell aging // inferred from expression pattern /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from mutant phenotype /// 0001666 // response to hypoxia // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001947 // heart looping // inferred from sequence or structural similarity /// 0003084 // positive regulation of systemic arterial blood pressure // inferred from mutant phenotype /// 0003273 // cell migration involved in endocardial cushion formation // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007507 // heart development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0016477 // cell migration // inferred from mutant phenotype /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0022009 // central nervous system vasculogenesis // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // inferred from mutant phenotype /// 0030155 // regulation of cell adhesion // traceable author statement /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0030509 // BMP signaling pathway // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030513 // positive regulation of BMP signaling pathway // inferred from direct assay /// 0031953 // negative regulation of protein autophosphorylation // inferred from direct assay /// 0031960 // response to corticosteroid // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0036273 // response to statin // inferred from electronic annotation /// 0042060 // wound healing // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // traceable author statement /// 0042325 // regulation of phosphorylation // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048745 // smooth muscle tissue development // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048845 // venous blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048870 // cell motility // inferred from mutant phenotype /// 0051001 // negative regulation of nitric-oxide synthase activity // inferred from mutant phenotype /// 0060326 // cell chemotaxis // inferred from mutant phenotype /// 0060348 // bone development // inferred from electronic annotation /// 0060394 // negative regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0070278 // extracellular matrix constituent secretion // inferred from electronic annotation /// 0070483 // detection of hypoxia // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071559 // response to transforming growth factor beta // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070022 // transforming growth factor beta receptor homodimeric complex // inferred by curator /// 0072563 // endothelial microparticle // inferred from electronic annotation </td> <td> 0004888 // transmembrane signaling receptor activity // non-traceable author statement /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from direct assay /// 0005072 // transforming growth factor beta receptor, cytoplasmic mediator activity // inferred from direct assay /// 0005114 // type II transforming growth factor beta receptor binding // inferred from physical interaction /// 0005114 // type II transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005534 // galactose binding // inferred from direct assay /// 0005539 // glycosaminoglycan binding // inferred from direct assay /// 0005539 // glycosaminoglycan binding // inferred from sequence or structural similarity /// 0034713 // type I transforming growth factor beta receptor binding // inferred from physical interaction /// 0034713 // type I transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0048185 // activin binding // traceable author statement /// 0050431 // transforming growth factor beta binding // inferred from physical interaction </td> <td> -198.17 </td> <td> 1126.36 </td> <td> -2.12 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 204610_s_at </td> <td> 204610_s_at </td> <td> NM_006848 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006848.1 /DEF=Homo sapiens hepatitis delta antigen-interacting protein A (DIPA), mRNA.  /FEA=mRNA /GEN=DIPA /PROD=hepatitis delta antigen-interacting protein A /DB_XREF=gi:5803004 /UG=Hs.66713 hepatitis delta antigen-interacting protein A /FL=gb:U63825.1 gb:NM_006848.1 </td> <td> NM_006848 </td> <td> coiled-coil domain containing 85B </td> <td> CCDC85B </td> <td> 11007 </td> <td> NM_006848 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 53.88 </td> <td> 173.46 </td> <td> 2.12 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 204215_at </td> <td> 204215_at </td> <td> NM_024315 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024315.1 /DEF=Homo sapiens hypothetical protein MGC4175 (MGC4175), mRNA. /FEA=mRNA /GEN=MGC4175 /PROD=hypothetical protein MGC4175 /DB_XREF=gi:13236556 /UG=Hs.322404 hypothetical protein MGC4175 /FL=gb:BC002837.1 gb:NM_024315.1 </td> <td> NM_024315 </td> <td> transmembrane protein 243, mitochondrial </td> <td> TMEM243 </td> <td> 79161 </td> <td> NM_024315 /// XM_005250585 /// XM_005250586 /// XM_005250587 /// XM_005250588 /// XM_005250589 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 40.37 </td> <td> 115.36 </td> <td> 2.12 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 207783_x_at </td> <td> 207783_x_at </td> <td> NM_017627 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017627.1 /DEF=Homo sapiens hypothetical protein FLJ20030 (FLJ20030), mRNA. /FEA=mRNA /GEN=FLJ20030 /PROD=hypothetical protein FLJ20030 /DB_XREF=gi:8923031 /UG=Hs.326456 hypothetical protein FLJ20030 /FL=gb:NM_017627.1 </td> <td> NM_017627 </td> <td> HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase </td> <td> HUWE1 </td> <td> 10075 </td> <td> NM_031407 /// XM_005261965 /// XM_005261966 /// XM_005261967 /// XM_005261968 /// XM_005261969 /// XM_005261971 /// XM_005261972 /// XM_006724574 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006284 // base-excision repair // inferred from mutant phenotype /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016574 // histone ubiquitination // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from sequence or structural similarity /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -1014.95 </td> <td> 5022.43 </td> <td> -2.12 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 202722_s_at </td> <td> 202722_s_at </td> <td> NM_002056 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002056.1 /DEF=Homo sapiens glutamine-fructose-6-phosphate transaminase 1 (GFPT1), mRNA.  /FEA=mRNA /GEN=GFPT1 /PROD=glucosamine-fructose-6-phosphateaminotransferase /DB_XREF=gi:4503980 /UG=Hs.1674 glutamine-fructose-6-phosphate transaminase 1 /FL=gb:M90516.1 gb:NM_002056.1 </td> <td> NM_002056 </td> <td> glutamine--fructose-6-phosphate transaminase 1 </td> <td> GFPT1 </td> <td> 2673 </td> <td> NM_001244710 /// NM_002056 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006002 // fructose 6-phosphate metabolic process // inferred from electronic annotation /// 0006042 // glucosamine biosynthetic process // inferred from electronic annotation /// 0006047 // UDP-N-acetylglucosamine metabolic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009744 // response to sucrose // inferred from electronic annotation /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032868 // response to insulin // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045719 // negative regulation of glycogen biosynthetic process // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004360 // glutamine-fructose-6-phosphate transaminase (isomerizing) activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> 39.95 </td> <td> 229.12 </td> <td> 2.12 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200026_at </td> <td> 200026_at </td> <td> NM_000995 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000995.1 /DEF=Homo sapiens ribosomal protein L34 (RPL34), mRNA. /FEA=mRNA /GEN=RPL34 /PROD=ribosomal protein L34 /DB_XREF=gi:4506636 /UG=Hs.250895 ribosomal protein L34 /FL=gb:L38941.1 gb:BC001773.1 gb:NM_000995.1 </td> <td> NM_000995 </td> <td> ribosomal protein L34 </td> <td> RPL34 </td> <td> 6164 </td> <td> NM_000995 /// NM_033625 /// XM_005263172 /// XM_006714287 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement </td> <td> -475.95 </td> <td> 2088.95 </td> <td> -2.12 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 217703_x_at </td> <td> 217703_x_at </td> <td> AA401963 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA401963 /FEA=EST /DB_XREF=gi:2055965 /DB_XREF=est:zu53c08.s1 /CLONE=IMAGE:741710 /UG=Hs.194107 ESTs, Moderately similar to ALU7_HUMAN ALU SUBFAMILY SQ SEQUENCE CONTAMINATION WARNING ENTRY H.sapiens </td> <td> AA401963 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 43.10 </td> <td> 109.28 </td> <td> 2.12 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 208785_s_at </td> <td> 208785_s_at </td> <td> BE893893 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE893893 /FEA=EST /DB_XREF=gi:10355716 /DB_XREF=est:601436260F1 /CLONE=IMAGE:3921446 /UG=Hs.121849 microtubule-associated proteins 1A1B light chain 3 /FL=gb:AF303888.1 gb:NM_022818.2 gb:AF183417.1 </td> <td> BE893893 </td> <td> microtubule-associated protein 1 light chain 3 beta </td> <td> MAP1LC3B </td> <td> 81631 </td> <td> NM_022818 /// XM_005256184 </td> <td> 0000045 // autophagic vacuole assembly // not recorded /// 0000422 // mitochondrion degradation // not recorded /// 0006914 // autophagy // inferred from electronic annotation /// 0006995 // cellular response to nitrogen starvation // not recorded /// 0032258 // CVT pathway // not recorded /// 0034727 // piecemeal microautophagy of nucleus // not recorded /// 0044805 // late nucleophagy // not recorded /// 0071211 // protein targeting to vacuole involved in autophagy // not recorded </td> <td> 0000407 // pre-autophagosomal structure // not recorded /// 0000421 // autophagic vacuole membrane // not recorded /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from sequence or structural similarity /// 0005829 // cytosol // not recorded /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005930 // axoneme // inferred from sequence or structural similarity /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // not recorded /// 0008429 // phosphatidylethanolamine binding // not recorded /// 0050811 // GABA receptor binding // not recorded </td> <td> -101.68 </td> <td> 489.56 </td> <td> -2.11 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 209464_at </td> <td> 209464_at </td> <td> AB011446 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB011446.1 /DEF=Homo sapiens mRNA for Aik2, complete cds. /FEA=mRNA /GEN=aik2 /PROD=Aik2 /DB_XREF=gi:5688865 /UG=Hs.180655 serinethreonine kinase 12 /FL=gb:BC000442.1 gb:AF004022.1 gb:AF008552.1 gb:AB011450.1 gb:AF015254.1 gb:NM_004217.1 gb:AB011446.1 </td> <td> AB011446 </td> <td> aurora kinase B </td> <td> AURKB </td> <td> 9212 </td> <td> NM_001256834 /// NM_001284526 /// NM_004217 /// XM_005256854 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0000910 // cytokinesis // inferred from electronic annotation /// 0002903 // negative regulation of B cell apoptotic process // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008608 // attachment of spindle microtubules to kinetochore // traceable author statement /// 0009838 // abscission // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016570 // histone modification // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031565 // cytokinesis checkpoint // inferred from sequence or structural similarity /// 0031577 // spindle checkpoint // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032466 // negative regulation of cytokinesis // inferred from sequence or structural similarity /// 0032467 // positive regulation of cytokinesis // inferred from mutant phenotype /// 0032467 // positive regulation of cytokinesis // traceable author statement /// 0034501 // protein localization to kinetochore // inferred from mutant phenotype /// 0034644 // cellular response to UV // inferred from direct assay /// 0036089 // cleavage furrow formation // inferred from direct assay /// 0043146 // spindle stabilization // inferred from mutant phenotype /// 0043988 // histone H3-S28 phosphorylation // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // traceable author statement /// 0051256 // spindle midzone assembly involved in mitosis // inferred from mutant phenotype /// 0051256 // spindle midzone assembly involved in mitosis // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051983 // regulation of chromosome segregation // traceable author statement </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000779 // condensed chromosome, centromeric region // inferred from direct assay /// 0000780 // condensed nuclear chromosome, centromeric region // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0010369 // chromocenter // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // traceable author statement /// 0032133 // chromosome passenger complex // inferred from physical interaction /// 0032133 // chromosome passenger complex // traceable author statement /// 0045171 // intercellular bridge // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004712 // protein serine/threonine/tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0035174 // histone serine kinase activity // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 27.43 </td> <td> 55.69 </td> <td> 2.11 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 213016_at </td> <td> 213016_at </td> <td> AA573805 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA573805 /FEA=EST /DB_XREF=gi:2348320 /DB_XREF=est:nk07g11.s1 /CLONE=IMAGE:1012868 /UG=Hs.152939 Homo sapiens clone 24630 mRNA sequence </td> <td> AA573805 </td> <td> bobby sox homolog (Drosophila) </td> <td> BBX </td> <td> 56987 </td> <td> NM_001142568 /// NM_001276286 /// NM_020235 /// XM_005247642 /// XM_005247643 /// XM_005247644 /// XM_005247645 /// XM_005247646 /// XM_006713706 /// XM_006713707 /// XM_006713708 /// XM_006713709 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0060348 // bone development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation </td> <td> 52.45 </td> <td> 146.68 </td> <td> 2.11 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 221726_at </td> <td> 221726_at </td> <td> BE250348 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE250348 /FEA=EST /DB_XREF=gi:9120458 /DB_XREF=est:600943342T1 /CLONE=IMAGE:2959811 /UG=Hs.326249 Homo sapiens mRNA; cDNA DKFZp586E0524 (from clone DKFZp586E0524) </td> <td> BE250348 </td> <td> ribosomal protein L22 </td> <td> RPL22 </td> <td> 6146 </td> <td> NM_000983 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -64.72 </td> <td> 667.09 </td> <td> -2.11 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 218271_s_at </td> <td> 218271_s_at </td> <td> NM_018622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018622.1 /DEF=Homo sapiens presenilins associated rhomboid-like protein (PRO2207), mRNA.  /FEA=mRNA /GEN=PRO2207 /PROD=presenilins associated rhomboid-like protein /DB_XREF=gi:8924133 /UG=Hs.13094 presenilins associated rhomboid-like protein /FL=gb:AF197937.1 gb:AF116692.1 gb:NM_018622.1 </td> <td> NM_018622 </td> <td> presenilin associated, rhomboid-like </td> <td> PARL </td> <td> 55486 </td> <td> NM_001037639 /// NM_001037640 /// NM_018622 /// XM_005247582 /// XM_005247583 /// XM_005247584 /// XM_005247585 /// XM_005247586 /// XM_005247587 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from electronic annotation /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -36.10 </td> <td> 215.62 </td> <td> -2.11 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 219132_at </td> <td> 219132_at </td> <td> NM_021255 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021255.1 /DEF=Homo sapiens pellino (Drosophila) homolog 2 (PELI2), mRNA. /FEA=mRNA /GEN=PELI2 /PROD=pellino (Drosophila) homolog 2 /DB_XREF=gi:10864062 /UG=Hs.44038 pellino (Drosophila) homolog 2 /FL=gb:AF302502.1 gb:NM_021255.1 </td> <td> NM_021255 </td> <td> pellino E3 ubiquitin protein ligase family member 2 </td> <td> PELI2 </td> <td> 57161 </td> <td> NM_021255 /// XM_005267890 /// XM_006720211 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0008063 // Toll signaling pathway // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0045087 // innate immune response // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -28.55 </td> <td> 40.80 </td> <td> -2.11 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200048_s_at </td> <td> 200048_s_at </td> <td> NM_006694 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006694.1 /DEF=Homo sapiens jumping translocation breakpoint (JTB), mRNA. /FEA=mRNA /GEN=JTB /PROD=jumping translocation breakpoint /DB_XREF=gi:5729888 /UG=Hs.6396 jumping translocation breakpoint /FL=gb:BC000499.1 gb:BC001363.1 gb:BC000996.2 gb:BC001667.1 gb:AB016488.1 gb:AF131797.1 gb:NM_006694.1 gb:AF115850.2 </td> <td> NM_006694 </td> <td> jumping translocation breakpoint </td> <td> JTB </td> <td> 10899 </td> <td> NM_006694 </td> <td> 0000910 // cytokinesis // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from mutant phenotype /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay </td> <td> 0019901 // protein kinase binding // inferred from direct assay </td> <td> 111.07 </td> <td> 636.69 </td> <td> 2.10 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 207243_s_at </td> <td> 207243_s_at </td> <td> NM_001743 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001743.1 /DEF=Homo sapiens calmodulin 2 (phosphorylase kinase, delta) (CALM2), mRNA.  /FEA=mRNA /GEN=CALM2 /PROD=calmodulin 2 (phosphorylase kinase, delta) /DB_XREF=gi:4502548 /UG=Hs.182278 calmodulin 2 (phosphorylase kinase, delta) /FL=gb:M19311.1 gb:NM_001743.1 </td> <td> NM_001743 </td> <td> calmodulin 1 (phosphorylase kinase, delta) /// calmodulin 2 (phosphorylase kinase, delta) /// calmodulin 3 (phosphorylase kinase, delta) </td> <td> CALM1 /// CALM2 /// CALM3 </td> <td> 801 /// 805 /// 808 </td> <td> NM_001166106 /// NM_001743 /// NM_005184 /// NM_006888 /// XM_006720258 </td> <td> 0001975 // response to amphetamine // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0005513 // detection of calcium ion // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007190 // activation of adenylate cyclase activity // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // inferred from direct assay /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred by curator /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030801 // positive regulation of cyclic nucleotide metabolic process // inferred from direct assay /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0051343 // positive regulation of cyclic-nucleotide phosphodiesterase activity // inferred from direct assay /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay /// 0055117 // regulation of cardiac muscle contraction // inferred from mutant phenotype /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from electronic annotation /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060316 // positive regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0061024 // membrane organization // traceable author statement /// 1901841 // regulation of high voltage-gated calcium channel activity // inferred from electronic annotation /// 1901844 // regulation of cell communication by electrical coupling involved in cardiac conduction // inferred by curator </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0030017 // sarcomere // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008179 // adenylate cyclase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0030235 // nitric-oxide synthase regulator activity // inferred from electronic annotation /// 0031432 // titin binding // inferred from physical interaction /// 0031800 // type 3 metabotropic glutamate receptor binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction /// 0031997 // N-terminal myristoylation domain binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation /// 0050998 // nitric-oxide synthase binding // inferred from electronic annotation /// 0072542 // protein phosphatase activator activity // inferred from direct assay </td> <td> 244.88 </td> <td> 2461.06 </td> <td> 2.10 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 52169_at </td> <td> 52169_at </td> <td> AI302185 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI302185:qn58d02.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-1902435 /clone_end=3' /gb=AI302185 /gi=3961531 /ug=Hs.4789 /len=522 </td> <td> AI302185 </td> <td> STE20-related kinase adaptor alpha </td> <td> STRADA </td> <td> 92335 </td> <td> NM_001003786 /// NM_001003787 /// NM_001003788 /// NM_001165969 /// NM_001165970 /// NM_153335 /// XM_005257797 /// XM_005257798 /// XM_005257799 /// XM_005257800 /// XM_005257801 /// XM_005257803 /// XR_243687 /// XR_243688 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0006611 // protein export from nucleus // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0032147 // activation of protein kinase activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0030295 // protein kinase activator activity // inferred from direct assay </td> <td> 34.92 </td> <td> 207.89 </td> <td> 2.10 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 213134_x_at </td> <td> 213134_x_at </td> <td> AI765445 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI765445 /FEA=EST /DB_XREF=gi:5231954 /DB_XREF=est:wi80b08.x1 /CLONE=IMAGE:2399607 /UG=Hs.77311 BTG family, member 3 </td> <td> AI765445 </td> <td> BTG family, member 3 </td> <td> BTG3 </td> <td> 10950 </td> <td> NM_001130914 /// NM_006806 /// XM_006723963 </td> <td> 0008285 // negative regulation of cell proliferation // traceable author statement /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -41.40 </td> <td> 299.93 </td> <td> -2.10 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 218107_at </td> <td> 218107_at </td> <td> NM_025160 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025160.1 /DEF=Homo sapiens hypothetical protein FLJ21016 (FLJ21016), mRNA. /FEA=mRNA /GEN=FLJ21016 /PROD=hypothetical protein FLJ21016 /DB_XREF=gi:13376760 /UG=Hs.289069 hypothetical protein FLJ21016 /FL=gb:NM_025160.1 </td> <td> NM_025160 </td> <td> WD repeat domain 26 </td> <td> WDR26 </td> <td> 80232 </td> <td> NM_001115113 /// NM_025160 /// XM_005273273 /// XM_006711817 /// XR_247043 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 51.27 </td> <td> 357.99 </td> <td> 2.10 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 206044_s_at </td> <td> 206044_s_at </td> <td> NM_004333 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004333.1 /DEF=Homo sapiens v-raf murine sarcoma viral oncogene homolog B1 (BRAF), mRNA.  /FEA=mRNA /GEN=BRAF /PROD=v-raf murine sarcoma viral oncogene homolog B1 /DB_XREF=gi:4757867 /UG=Hs.622 v-raf murine sarcoma viral oncogene homolog B1 /FL=gb:M95712.1 gb:NM_004333.1 </td> <td> NM_004333 </td> <td> B-Raf proto-oncogene, serine/threonine kinase /// KIAA1549 </td> <td> BRAF /// KIAA1549 </td> <td> 673 /// 57670 </td> <td> NM_001164665 /// NM_004333 /// NM_020910 /// XM_005250045 /// XM_005250046 /// XM_006716071 /// XM_006716072 /// XR_242190 </td> <td> 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070849 // response to epidermal growth factor // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016442 // RISC complex // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0031267 // small GTPase binding // inferred from physical interaction /// 0031434 // mitogen-activated protein kinase kinase binding // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -25.95 </td> <td> 58.03 </td> <td> -2.10 </td> <td> 0.07 </td> <td> 0.11 </td> <td> -4.54 </td> </tr>
  <tr> <td> 208673_s_at </td> <td> 208673_s_at </td> <td> AF107405 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF107405.1 /DEF=Homo sapiens pre-mRNA splicing factor (SFRS3) mRNA, complete cds. /FEA=mRNA /GEN=SFRS3 /PROD=pre-mRNA splicing factor /DB_XREF=gi:5531903 /UG=Hs.167460 splicing factor, arginineserine-rich 3 /FL=gb:BC000914.1 gb:AF107405.1 </td> <td> AF107405 </td> <td> serine/arginine-rich splicing factor 3 </td> <td> SRSF3 </td> <td> 6428 </td> <td> NM_003017 /// NR_036610 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 72.18 </td> <td> 200.49 </td> <td> 2.10 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212537_x_at </td> <td> 212537_x_at </td> <td> BE733979 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE733979 /FEA=EST /DB_XREF=gi:10147971 /DB_XREF=est:601571007F1 /CLONE=IMAGE:3925800 /UG=Hs.82202 ribosomal protein L17 </td> <td> BE733979 </td> <td> chromosome 18 open reading frame 32 /// ribosomal protein L17 /// RPL17-C18orf32 readthrough /// small nucleolar RNA, C/D box 58A /// small nucleolar RNA, C/D box 58B /// small nucleolar RNA, C/D box 58C </td> <td> C18orf32 /// RPL17 /// RPL17-C18orf32 /// SNORD58A /// SNORD58B /// SNORD58C </td> <td> 6139 /// 26790 /// 26791 /// 497661 /// 100124516 /// 100526842 </td> <td> NM_000985 /// NM_001035005 /// NM_001035006 /// NM_001199340 /// NM_001199341 /// NM_001199342 /// NM_001199343 /// NM_001199344 /// NM_001199345 /// NM_001199346 /// NM_001199355 /// NM_001199356 /// NR_002571 /// NR_002572 /// NR_003701 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015934 // large ribosomal subunit // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -532.48 </td> <td> 2914.81 </td> <td> -2.10 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201768_s_at </td> <td> 201768_s_at </td> <td> BC004467 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004467.1 /DEF=Homo sapiens, KIAA0171 gene product, clone MGC:10257, mRNA, complete cds.  /FEA=mRNA /PROD=KIAA0171 gene product /DB_XREF=gi:13325306 /UG=Hs.155623 KIAA0171 gene product /FL=gb:D79993.1 gb:BC004467.1 gb:NM_014666.1 </td> <td> BC004467 </td> <td> clathrin interactor 1 </td> <td> CLINT1 </td> <td> 9685 </td> <td> NM_001195555 /// NM_001195556 /// NM_014666 </td> <td> 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from physical interaction </td> <td> -35.77 </td> <td> 187.96 </td> <td> -2.10 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201016_at </td> <td> 201016_at </td> <td> BE542684 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE542684 /FEA=EST /DB_XREF=gi:9771329 /DB_XREF=est:601067180F1 /CLONE=IMAGE:3453571 /UG=Hs.4310 eukaryotic translation initiation factor 1A /FL=gb:BC000793.1 gb:L18960.1 gb:NM_001412.1 </td> <td> BE542684 </td> <td> eukaryotic translation initiation factor 1A, X-linked </td> <td> EIF1AX </td> <td> 1964 </td> <td> NM_001412 </td> <td> 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 56.35 </td> <td> 212.25 </td> <td> 2.09 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 220964_s_at </td> <td> 220964_s_at </td> <td> NM_030981 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030981.1 /DEF=Homo sapiens small GTP-binding protein (RAB1B), mRNA. /FEA=mRNA /GEN=RAB1B /PROD=small GTP-binding protein /DB_XREF=gi:13569961 /FL=gb:NM_030981.1 </td> <td> NM_030981 </td> <td> RAB1B, member RAS oncogene family </td> <td> RAB1B </td> <td> 81876 </td> <td> NM_030981 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay </td> <td> 79.37 </td> <td> 294.99 </td> <td> 2.09 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201723_s_at </td> <td> 201723_s_at </td> <td> U41514 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U41514.1 /DEF=Human UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase mRNA, complete cds.  /FEA=mRNA /PROD=UDP-GalNAc:polypeptideN-acetylgalactosaminyltransferase /DB_XREF=gi:1136284 /UG=Hs.80120 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) /FL=gb:U41514.1 gb:NM_020474.2 </td> <td> U41514 </td> <td> polypeptide N-acetylgalactosaminyltransferase 1 </td> <td> GALNT1 </td> <td> 2589 </td> <td> NM_020474 /// XM_005258239 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0006493 // protein O-linked glycosylation // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0018242 // protein O-linked glycosylation via serine // inferred from direct assay /// 0018243 // protein O-linked glycosylation via threonine // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 58.08 </td> <td> 841.29 </td> <td> 2.09 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 206158_s_at </td> <td> 206158_s_at </td> <td> NM_003418 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003418.1 /DEF=Homo sapiens zinc finger protein 9 (a cellular retroviral nucleic acid binding protein) (ZNF9), mRNA.  /FEA=mRNA /GEN=ZNF9 /PROD=zinc finger protein 9 (a cellular retroviralnucleic acid binding protein) /DB_XREF=gi:4827070 /UG=Hs.2110 zinc finger protein 9 (a cellular retroviral nucleic acid binding protein) /FL=gb:NM_003418.1 gb:M28372.1 </td> <td> NM_003418 </td> <td> CCHC-type zinc finger, nucleic acid binding protein </td> <td> CNBP </td> <td> 7555 </td> <td> NM_001127192 /// NM_001127193 /// NM_001127194 /// NM_001127195 /// NM_001127196 /// NM_003418 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from sequence or structural similarity </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -138.10 </td> <td> 632.20 </td> <td> -2.09 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 221230_s_at </td> <td> 221230_s_at </td> <td> NM_016374 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016374.2 /DEF=Homo sapiens RBP1-like protein (BCAA), mRNA. /FEA=mRNA /GEN=BCAA /PROD=RBP1-like protein /DB_XREF=gi:13518237 /FL=gb:NM_016374.2 </td> <td> NM_016374 </td> <td> AT rich interactive domain 4B (RBP1-like) </td> <td> ARID4B </td> <td> 51742 </td> <td> NM_001206794 /// NM_016374 /// NM_031371 /// XM_005273160 /// XM_006711781 </td> <td> 0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0034773 // histone H4-K20 trimethylation // inferred from electronic annotation /// 0036124 // histone H3-K9 trimethylation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -37.80 </td> <td> 154.10 </td> <td> -2.09 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 221829_s_at </td> <td> 221829_s_at </td> <td> AI307759 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI307759 /FEA=EST /DB_XREF=gi:4002363 /DB_XREF=est:tb24g08.x1 /CLONE=IMAGE:2055326 /UG=Hs.168075 karyopherin (importin) beta 2 </td> <td> AI307759 </td> <td> transportin 1 </td> <td> TNPO1 </td> <td> 3842 </td> <td> NM_002270 /// NM_153188 /// XM_005248500 /// XM_005248501 </td> <td> 0000060 // protein import into nucleus, translocation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -551.27 </td> <td> 1686.51 </td> <td> -2.09 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 217398_x_at </td> <td> 217398_x_at </td> <td> AK026525 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026525.1 /DEF=Homo sapiens cDNA: FLJ22872 fis, clone KAT02551, highly similar to HUMGAPDH Human glyceraldehyde-3-phosphate dehydrogenase (GAPDH) mRNA.  /FEA=mRNA /DB_XREF=gi:10439402 /UG=Hs.169476 glyceraldehyde-3-phosphate dehydrogenase </td> <td> AK026525 </td> <td> glyceraldehyde-3-phosphate dehydrogenase </td> <td> GAPDH </td> <td> 2597 </td> <td> NM_001256799 /// NM_001289745 /// NM_001289746 /// NM_002046 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from sequence or structural similarity /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0035606 // peptidyl-cysteine S-trans-nitrosylation // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0051402 // neuron apoptotic process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0004365 // glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity // inferred from sequence or structural similarity /// 0004365 // glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0035605 // peptidyl-cysteine S-nitrosylase activity // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from physical interaction /// 0050661 // NADP binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> -1228.30 </td> <td> 4702.48 </td> <td> -2.09 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212582_at </td> <td> 212582_at </td> <td> AL049923 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049923.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564E2282 (from clone DKFZp564E2282). /FEA=mRNA /DB_XREF=gi:4884169 /UG=Hs.109694 KIAA1451 protein </td> <td> AL049923 </td> <td> oxysterol binding protein-like 8 </td> <td> OSBPL8 </td> <td> 114882 </td> <td> NM_001003712 /// NM_020841 /// XM_005268621 /// XM_005268622 /// XM_005268623 /// XM_006719222 /// XM_006719223 /// XM_006719224 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0010891 // negative regulation of sequestering of triglyceride // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from direct assay /// 0046628 // positive regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0090204 // protein localization to nuclear pore // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from direct assay </td> <td> -45.15 </td> <td> 298.12 </td> <td> -2.09 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 217871_s_at </td> <td> 217871_s_at </td> <td> NM_002415 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002415.1 /DEF=Homo sapiens macrophage migration inhibitory factor (glycosylation-inhibiting factor) (MIF), mRNA.  /FEA=mRNA /GEN=MIF /PROD=macrophage migration inhibitory factor(glycosylation-inhibiting factor) /DB_XREF=gi:4505184 /UG=Hs.73798 macrophage migration inhibitory factor (glycosylation-inhibiting factor) /FL=gb:BC000447.1 gb:M25639.1 gb:L10612.1 gb:NM_002415.1 </td> <td> NM_002415 </td> <td> macrophage migration inhibitory factor (glycosylation-inhibiting factor) </td> <td> MIF </td> <td> 4282 </td> <td> NM_002415 </td> <td> 0001516 // prostaglandin biosynthetic process // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002906 // negative regulation of mature B cell apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007569 // cell aging // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0010739 // positive regulation of protein kinase A signaling // inferred from direct assay /// 0019752 // carboxylic acid metabolic process // inferred from direct assay /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from direct assay /// 0031666 // positive regulation of lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032269 // negative regulation of cellular protein metabolic process // inferred from electronic annotation /// 0033033 // negative regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0043030 // regulation of macrophage activation // non-traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0045087 // innate immune response // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0050715 // positive regulation of cytokine secretion // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050918 // positive chemotaxis // inferred from direct assay /// 0061078 // positive regulation of prostaglandin secretion involved in immune response // inferred from electronic annotation /// 0061081 // positive regulation of myeloid leukocyte cytokine production involved in immune response // inferred from electronic annotation /// 0070207 // protein homotrimerization // inferred from physical interaction /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071157 // negative regulation of cell cycle arrest // inferred from direct assay /// 0090238 // positive regulation of arachidonic acid secretion // inferred from electronic annotation /// 0090344 // negative regulation of cell aging // inferred from direct assay /// 1902166 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from direct assay /// 2000343 // positive regulation of chemokine (C-X-C motif) ligand 2 production // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004167 // dopachrome isomerase activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005125 // cytokine activity // inferred from direct assay /// 0005126 // cytokine receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042056 // chemoattractant activity // inferred from direct assay /// 0050178 // phenylpyruvate tautomerase activity // inferred from direct assay </td> <td> -213.30 </td> <td> 1459.00 </td> <td> -2.09 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201553_s_at </td> <td> 201553_s_at </td> <td> NM_005561 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005561.2 /DEF=Homo sapiens lysosomal-associated membrane protein 1 (LAMP1), mRNA. /FEA=mRNA /GEN=LAMP1 /PROD=lysosomal-associated membrane protein 1 /DB_XREF=gi:7669500 /UG=Hs.150101 lysosomal-associated membrane protein 1 /FL=gb:J04182.1 gb:J03263.1 gb:NM_005561.2 </td> <td> NM_005561 </td> <td> lysosomal-associated membrane protein 1 </td> <td> LAMP1 </td> <td> 3916 </td> <td> NM_005561 </td> <td> 0006914 // autophagy // inferred from electronic annotation /// 0008626 // granzyme-mediated apoptotic signaling pathway // inferred from mutant phenotype /// 0043323 // positive regulation of natural killer cell degranulation // inferred from mutant phenotype /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0048102 // autophagic cell death // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0072594 // establishment of protein localization to organelle // inferred from mutant phenotype /// 0090160 // Golgi to lysosome transport // inferred from mutant phenotype /// 1902513 // regulation of organelle transport along microtubule // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005771 // multivesicular body // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044194 // cytolytic granule // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097208 // alveolar lamellar body // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> -358.60 </td> <td> 1935.35 </td> <td> -2.09 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 211796_s_at </td> <td> 211796_s_at </td> <td> AF043179 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF043179.1 /DEF=Homo sapiens T cell receptor beta chain (TCRBV13S1-TCRBJ2S1) mRNA, complete cds.  /FEA=CDS /GEN=TCRBV13S1-TCRBJ2S1 /PROD=T cell receptor beta chain /DB_XREF=gi:3002924 /UG=Hs.303157 T cell receptor beta locus /FL=gb:AF043179.1 </td> <td> AF043179 </td> <td> T cell receptor beta constant 1 </td> <td> TRBC1 </td> <td> 28639 </td> <td>  </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0002230 // positive regulation of defense response to virus by host // inferred from sequence or structural similarity /// 0002230 // positive regulation of defense response to virus by host // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from direct assay /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // non-traceable author statement /// 0002827 // positive regulation of T-helper 1 type immune response // traceable author statement /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0010535 // positive regulation of activation of JAK2 kinase activity // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0032693 // negative regulation of interleukin-10 production // inferred from mutant phenotype /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // traceable author statement /// 0032733 // positive regulation of interleukin-10 production // inferred from direct assay /// 0032733 // positive regulation of interleukin-10 production // traceable author statement /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0032740 // positive regulation of interleukin-17 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0032816 // positive regulation of natural killer cell activation // inferred by curator /// 0032819 // positive regulation of natural killer cell proliferation // inferred from direct assay /// 0034105 // positive regulation of tissue remodeling // inferred by curator /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042104 // positive regulation of activated T cell proliferation // inferred from direct assay /// 0042346 // positive regulation of NF-kappaB import into nucleus // traceable author statement /// 0042510 // regulation of tyrosine phosphorylation of Stat1 protein // inferred from direct assay /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042520 // positive regulation of tyrosine phosphorylation of Stat4 protein // inferred from direct assay /// 0042523 // positive regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0043382 // positive regulation of memory T cell differentiation // inferred from sequence or structural similarity /// 0043382 // positive regulation of memory T cell differentiation // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048771 // tissue remodeling // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0050776 // regulation of immune response // traceable author statement /// 0050829 // defense response to Gram-negative bacterium // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051135 // positive regulation of NK T cell activation // inferred by curator /// 0051135 // positive regulation of NK T cell activation // inferred from direct assay /// 0051142 // positive regulation of NK T cell proliferation // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from electronic annotation /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from sequence or structural similarity /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from electronic annotation /// 2000330 // positive regulation of T-helper 17 cell lineage commitment // inferred from sequence or structural similarity /// 2000330 // positive regulation of T-helper 17 cell lineage commitment // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070743 // interleukin-23 complex // inferred from direct assay </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0045519 // interleukin-23 receptor binding // inferred from direct assay /// 0045519 // interleukin-23 receptor binding // inferred from electronic annotation </td> <td> 52.80 </td> <td> 111.00 </td> <td> 2.08 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 210973_s_at </td> <td> 210973_s_at </td> <td> M63889 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M63889.1 /DEF=Human heparin-binding growth factor receptor (HBGF-R-alpha-a3) mRNA, complete cds.  /FEA=mRNA /GEN=HBGF-R /PROD=heparin-binding growth factor receptor /DB_XREF=gi:183882 /UG=Hs.748 fibroblast growth factor receptor 1 (fms-related tyrosine kinase 2, Pfeiffer syndrome) /FL=gb:M63889.1 </td> <td> M63889 </td> <td> fibroblast growth factor receptor 1 </td> <td> FGFR1 </td> <td> 2260 </td> <td> NM_001174063 /// NM_001174064 /// NM_001174065 /// NM_001174066 /// NM_001174067 /// NM_015850 /// NM_023105 /// NM_023106 /// NM_023107 /// NM_023108 /// NM_023109 /// NM_023110 /// NM_023111 /// NM_032191 /// XM_006716303 /// XM_006716304 /// XM_006716305 /// XM_006716306 /// XM_006716307 /// XM_006716308 /// XM_006716309 /// XM_006716310 /// XM_006716311 /// XM_006716312 /// XM_006716313 /// XM_006716314 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000165 // MAPK cascade // traceable author statement /// 0001501 // skeletal system development // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001759 // organ induction // inferred from electronic annotation /// 0001764 // neuron migration // traceable author statement /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010518 // positive regulation of phospholipase activity // traceable author statement /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0021769 // orbitofrontal cortex development // inferred from electronic annotation /// 0021847 // ventricular zone neuroblast division // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0035607 // fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042473 // outer ear morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0043009 // chordate embryonic development // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045595 // regulation of cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048339 // paraxial mesoderm development // inferred from electronic annotation /// 0048378 // regulation of lateral mesodermal cell fate specification // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048699 // generation of neurons // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // traceable author statement /// 0048762 // mesenchymal cell differentiation // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060117 // auditory receptor cell development // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060484 // lung-associated mesenchyme development // inferred from electronic annotation /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation /// 0090080 // positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> 40.07 </td> <td> 116.66 </td> <td> 2.08 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 213453_x_at </td> <td> 213453_x_at </td> <td> BF689355 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF689355 /FEA=EST /DB_XREF=gi:11974763 /DB_XREF=est:602184994T1 /CLONE=IMAGE:4299431 /UG=Hs.169476 glyceraldehyde-3-phosphate dehydrogenase </td> <td> BF689355 </td> <td> glyceraldehyde-3-phosphate dehydrogenase </td> <td> GAPDH </td> <td> 2597 </td> <td> NM_001256799 /// NM_001289745 /// NM_001289746 /// NM_002046 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from sequence or structural similarity /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0035606 // peptidyl-cysteine S-trans-nitrosylation // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0051402 // neuron apoptotic process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0004365 // glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity // inferred from sequence or structural similarity /// 0004365 // glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0035605 // peptidyl-cysteine S-nitrosylase activity // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from physical interaction /// 0050661 // NADP binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> -1183.60 </td> <td> 4204.30 </td> <td> -2.08 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201019_s_at </td> <td> 201019_s_at </td> <td> NM_001412 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001412.1 /DEF=Homo sapiens eukaryotic translation initiation factor 1A (EIF1A), mRNA.  /FEA=mRNA /GEN=EIF1A /PROD=eukaryotic translation initiation factor 1A /DB_XREF=gi:4503498 /UG=Hs.4310 eukaryotic translation initiation factor 1A /FL=gb:BC000793.1 gb:L18960.1 gb:NM_001412.1 </td> <td> NM_001412 </td> <td> eukaryotic translation initiation factor 1A, X-linked </td> <td> EIF1AX </td> <td> 1964 </td> <td> NM_001412 </td> <td> 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 127.68 </td> <td> 458.71 </td> <td> 2.08 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200667_at </td> <td> 200667_at </td> <td> BF448062 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF448062 /FEA=EST /DB_XREF=gi:11513123 /DB_XREF=est:7q97h09.x1 /CLONE=IMAGE:3706600 /UG=Hs.118797 ubiquitin-conjugating enzyme E2D 3 (homologous to yeast UBC45) /FL=gb:U39318.1 gb:BC003395.1 gb:NM_003340.1 </td> <td> BF448062 </td> <td> ubiquitin-conjugating enzyme E2D 3 </td> <td> UBE2D3 </td> <td> 7323 </td> <td> NM_003340 /// NM_181886 /// NM_181887 /// NM_181888 /// NM_181889 /// NM_181890 /// NM_181891 /// NM_181892 /// NM_181893 /// XM_005263200 /// XM_005263205 /// XM_006714297 /// XM_006714298 /// XM_006714299 /// XM_006714300 /// XM_006714301 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030509 // BMP signaling pathway // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0071456 // cellular response to hypoxia // traceable author statement </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> -48.57 </td> <td> 399.24 </td> <td> -2.08 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 203648_at </td> <td> 203648_at </td> <td> NM_014760 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014760.1 /DEF=Homo sapiens KIAA0218 gene product (KIAA0218), mRNA. /FEA=mRNA /GEN=KIAA0218 /PROD=KIAA0218 gene product /DB_XREF=gi:7662007 /UG=Hs.75863 KIAA0218 gene product /FL=gb:D86972.1 gb:NM_014760.1 </td> <td> NM_014760 </td> <td> TatD DNase domain containing 2 </td> <td> TATDN2 </td> <td> 9797 </td> <td> NM_014760 </td> <td> 0000737 // DNA catabolic process, endonucleolytic // inferred from electronic annotation /// 0006308 // DNA catabolic process // not recorded /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043229 // intracellular organelle // not recorded </td> <td> 0004518 // nuclease activity // inferred from electronic annotation /// 0004536 // deoxyribonuclease activity // not recorded /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016888 // endodeoxyribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 29.62 </td> <td> 118.79 </td> <td> 2.08 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 208625_s_at </td> <td> 208625_s_at </td> <td> AF104913 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF104913.1 /DEF=Homo sapiens eukaryotic protein synthesis initiation factor mRNA, complete cds.  /FEA=mRNA /PROD=eukaryotic protein synthesis initiation factor /DB_XREF=gi:3941723 /UG=Hs.211568 eukaryotic translation initiation factor 4 gamma, 1 /FL=gb:AF104913.1 </td> <td> AF104913 </td> <td> eukaryotic translation initiation factor 4 gamma, 1 </td> <td> EIF4G1 </td> <td> 1981 </td> <td> NM_001194946 /// NM_001194947 /// NM_001291157 /// NM_004953 /// NM_182917 /// NM_198241 /// NM_198242 /// NM_198244 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from mutant phenotype /// 0006446 // regulation of translational initiation // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 97.50 </td> <td> 414.65 </td> <td> 2.08 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 209786_at </td> <td> 209786_at </td> <td> BC001282 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001282.1 /DEF=Homo sapiens, high-mobility group (nonhistone chromosomal) protein 17-like 3, clone MGC:5145, mRNA, complete cds.  /FEA=mRNA /PROD=high-mobility group (nonhistone chromosomal)protein 17-like 3 /DB_XREF=gi:12654876 /UG=Hs.236774 high-mobility group (nonhistone chromosomal) protein 17-like 3 /FL=gb:BC001282.1 </td> <td> BC001282 </td> <td> high mobility group nucleosomal binding domain 4 </td> <td> HMGN4 </td> <td> 10473 </td> <td> NM_006353 </td> <td>  </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from electronic annotation </td> <td> 32.35 </td> <td> 201.35 </td> <td> 2.07 </td> <td> 0.07 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 203187_at </td> <td> 203187_at </td> <td> NM_001380 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001380.1 /DEF=Homo sapiens dedicator of cyto-kinesis 1 (DOCK1), mRNA. /FEA=mRNA /GEN=DOCK1 /PROD=dedicator of cyto-kinesis 1 /DB_XREF=gi:4503354 /UG=Hs.82295 dedicator of cyto-kinesis 1 /FL=gb:D50857.1 gb:NM_001380.1 </td> <td> NM_001380 </td> <td> dedicator of cytokinesis 1 </td> <td> DOCK1 </td> <td> 1793 </td> <td> NM_001290223 /// NM_001380 /// XM_006717681 /// XM_006717682 /// XM_006717683 </td> <td> 0006909 // phagocytosis // inferred from electronic annotation /// 0006911 // phagocytosis, engulfment // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0045087 // innate immune response // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation </td> <td> -40.50 </td> <td> 201.72 </td> <td> -2.07 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 217766_s_at </td> <td> 217766_s_at </td> <td> NM_014313 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014313.1 /DEF=Homo sapiens small membrane protein 1 (SMP1), mRNA. /FEA=mRNA /GEN=SMP1 /PROD=small membrane protein 1 /DB_XREF=gi:7657594 /UG=Hs.107979 small membrane protein 1 /FL=gb:AL136627.1 gb:AF081282.1 gb:NM_014313.1 </td> <td> NM_014313 </td> <td> transmembrane protein 50A </td> <td> TMEM50A </td> <td> 23585 </td> <td> NM_014313 /// XM_005245817 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 34.80 </td> <td> 237.10 </td> <td> 2.07 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 208896_at </td> <td> 208896_at </td> <td> X98743 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X98743.1 /DEF=H.sapiens mRNA for RNA helicase (Myc-regulated dead box protein). /FEA=mRNA /PROD=RNA helicase /DB_XREF=gi:1498228 /UG=Hs.100555 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 18 (Myc-regulated) /FL=gb:BC001238.1 gb:BC003360.1 </td> <td> X98743 </td> <td> DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 </td> <td> DDX18 </td> <td> 8886 </td> <td> NM_006773 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 29.20 </td> <td> 108.78 </td> <td> 2.07 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 204604_at </td> <td> 204604_at </td> <td> NM_012395 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012395.1 /DEF=Homo sapiens PFTAIRE protein kinase 1 (PFTK1), mRNA. /FEA=mRNA /GEN=PFTK1 /PROD=PFTAIRE protein kinase 1 /DB_XREF=gi:6912583 /UG=Hs.57856 PFTAIRE protein kinase 1 /FL=gb:AB020641.1 gb:NM_012395.1 </td> <td> NM_012395 </td> <td> cyclin-dependent kinase 14 </td> <td> CDK14 </td> <td> 5218 </td> <td> NM_001287135 /// NM_001287136 /// NM_001287137 /// NM_012395 /// XM_005250435 /// XM_005250436 /// XM_005250438 /// XM_005250439 /// XM_006716026 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from mutant phenotype /// 0060828 // regulation of canonical Wnt signaling pathway // inferred from direct assay </td> <td> 0000308 // cytoplasmic cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from mutant phenotype /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030332 // cyclin binding // inferred from physical interaction </td> <td> 38.67 </td> <td> 162.64 </td> <td> 2.07 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 220155_s_at </td> <td> 220155_s_at </td> <td> NM_023924 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_023924.1 /DEF=Homo sapiens hypothetical protein FLJ13441 (FLJ13441), mRNA. /FEA=mRNA /GEN=FLJ13441 /PROD=hypothetical protein FLJ13441 /DB_XREF=gi:12965190 /UG=Hs.232146 hypothetical protein FLJ13441 /FL=gb:NM_023924.1 </td> <td> NM_023924 </td> <td> bromodomain containing 9 </td> <td> BRD9 </td> <td> 65980 </td> <td> NM_001009877 /// NM_023924 /// NR_027633 /// XM_006714492 /// XM_006714493 /// XM_006714494 /// XR_427662 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation </td> <td>  </td> <td> 0003676 // nucleic acid binding // non-traceable author statement /// 0070577 // lysine-acetylated histone binding // inferred from direct assay </td> <td> 25.63 </td> <td> 156.24 </td> <td> 2.07 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 202433_at </td> <td> 202433_at </td> <td> NM_005827 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005827.1 /DEF=Homo sapiens UDP-galactose transporter related (UGTREL1), mRNA. /FEA=mRNA /GEN=UGTREL1 /PROD=UDP-galactose transporter related /DB_XREF=gi:5032212 /UG=Hs.154073 UDP-galactose transporter related /FL=gb:D87989.1 gb:NM_005827.1 </td> <td> NM_005827 </td> <td> solute carrier family 35, member B1 </td> <td> SLC35B1 </td> <td> 10237 </td> <td> NM_001278784 /// NM_005827 /// XM_005256929 /// XM_006721632 </td> <td> 0006810 // transport // traceable author statement /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0072334 // UDP-galactose transmembrane transport // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // traceable author statement </td> <td> 0005459 // UDP-galactose transmembrane transporter activity // traceable author statement </td> <td> 50.97 </td> <td> 379.66 </td> <td> 2.07 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 208308_s_at </td> <td> 208308_s_at </td> <td> NM_000175 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000175.1 /DEF=Homo sapiens glucose phosphate isomerase (GPI), mRNA. /FEA=mRNA /GEN=GPI /PROD=glucose phosphate isomerase /DB_XREF=gi:4504086 /UG=Hs.180532 glucose phosphate isomerase /FL=gb:BC004982.1 gb:K03515.1 gb:NM_000175.1 </td> <td> NM_000175 </td> <td> glucose-6-phosphate isomerase </td> <td> GPI </td> <td> 2821 </td> <td> NM_000175 /// NM_001184722 /// NM_001289789 /// NM_001289790 /// XM_005258763 /// XM_005258764 /// XM_006723148 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0006959 // humoral immune response // traceable author statement /// 0007599 // hemostasis // traceable author statement /// 0007611 // learning or memory // inferred from electronic annotation /// 0019242 // methylglyoxal biosynthetic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046185 // aldehyde catabolic process // inferred from electronic annotation /// 0051156 // glucose 6-phosphate metabolic process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004347 // glucose-6-phosphate isomerase activity // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016866 // intramolecular transferase activity // inferred from electronic annotation /// 0048029 // monosaccharide binding // inferred from electronic annotation </td> <td> -145.27 </td> <td> 503.39 </td> <td> -2.07 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 218866_s_at </td> <td> 218866_s_at </td> <td> NM_016310 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016310.1 /DEF=Homo sapiens polymerase (RNA) III (DNA directed) polypeptide K (12.3 kDa) (POLR3K), mRNA.  /FEA=mRNA /GEN=POLR3K /PROD=polymerase (RNA) III (DNA directed) polypeptideK (12.3 kDa) /DB_XREF=gi:7706498 /UG=Hs.110857 polymerase (RNA) III (DNA directed) polypeptide K (12.3 kDa) /FL=gb:AF060223.1 gb:AF051316.1 gb:NM_016310.1 </td> <td> NM_016310 </td> <td> polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa </td> <td> POLR3K </td> <td> 51728 </td> <td> NM_016310 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // not recorded /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051607 // defense response to virus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005666 // DNA-directed RNA polymerase III complex // not recorded /// 0005829 // cytosol // traceable author statement </td> <td> 0001056 // RNA polymerase III activity // not recorded /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 28.80 </td> <td> 86.95 </td> <td> 2.07 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 211684_s_at </td> <td> 211684_s_at </td> <td> AF250307 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF250307.1 /DEF=Homo sapiens cytoplasmic dynein intermediate chain 2C mRNA, complete cds.  /FEA=mRNA /PROD=cytoplasmic dynein intermediate chain 2C /DB_XREF=gi:13649464 /FL=gb:AF250307.1 </td> <td> AF250307 </td> <td> dynein, cytoplasmic 1, intermediate chain 2 </td> <td> DYNC1I2 </td> <td> 1781 </td> <td> NM_001271785 /// NM_001271786 /// NM_001271787 /// NM_001271788 /// NM_001271789 /// NM_001271790 /// NM_001378 /// XM_005246363 /// XM_005246364 /// XM_005246365 /// XM_005246366 /// XM_005246367 /// XM_005246369 /// XM_006712347 /// XM_006712348 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement </td> <td> 0005737 // cytoplasm // non-traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0030286 // dynein complex // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay </td> <td> 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 128.48 </td> <td> 717.14 </td> <td> 2.06 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201914_s_at </td> <td> 201914_s_at </td> <td> AK001465 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001465.1 /DEF=Homo sapiens cDNA FLJ10603 fis, clone NT2RP2005012, highly similar to Homo sapiens mRNA for SEC63 protein.  /FEA=mRNA /DB_XREF=gi:7022740 /UG=Hs.31575 SEC63, endoplasmic reticulum translocon component (S. cerevisiae) like /FL=gb:AF100141.1 gb:NM_007214.1 </td> <td> AK001465 </td> <td> SEC63 homolog (S. cerevisiae) </td> <td> SEC63 </td> <td> 11231 </td> <td> NM_007214 /// NM_018529 </td> <td> 0001889 // liver development // inferred from electronic annotation /// 0006612 // protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // inferred from mutant phenotype /// 0006620 // posttranslational protein targeting to membrane // inferred from mutant phenotype /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0031204 // posttranslational protein targeting to membrane, translocation // inferred from electronic annotation /// 0072001 // renal system development // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -32.08 </td> <td> 146.99 </td> <td> -2.05 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 203232_s_at </td> <td> 203232_s_at </td> <td> NM_000332 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000332.1 /DEF=Homo sapiens spinocerebellar ataxia 1 (olivopontocerebellar ataxia 1, autosomal dominant, ataxin 1) (SCA1), mRNA.  /FEA=mRNA /GEN=SCA1 /PROD=ataxin 1 /DB_XREF=gi:4506792 /UG=Hs.74520 spinocerebellar ataxia 1 (olivopontocerebellar ataxia 1, autosomal dominant, ataxin 1) /FL=gb:NM_000332.1 </td> <td> NM_000332 </td> <td> ataxin 1 </td> <td> ATXN1 </td> <td> 6310 </td> <td> NM_000332 /// NM_001128164 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006396 // RNA processing // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // inferred from electronic annotation /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051168 // nuclear export // inferred from direct assay /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0042272 // nuclear RNA export factor complex // inferred from direct assay /// 0042405 // nuclear inclusion body // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008266 // poly(U) RNA binding // inferred from direct assay /// 0034046 // poly(G) binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0043621 // protein self-association // inferred from direct assay </td> <td> 32.27 </td> <td> 72.11 </td> <td> 2.05 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212697_at </td> <td> 212697_at </td> <td> AL515874 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL515874 /FEA=EST /DB_XREF=gi:12779367 /DB_XREF=est:AL515874 /CLONE=CS0DA001YF06 (3 prime) /UG=Hs.83086 Homo sapiens GT212 mRNA </td> <td> AL515874 </td> <td> family with sequence similarity 134, member C </td> <td> FAM134C </td> <td> 162427 </td> <td> NM_178126 /// NR_026697 /// XM_006721729 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -32.10 </td> <td> 233.03 </td> <td> -2.05 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 217347_at </td> <td> 217347_at </td> <td> Z82202 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:Z82202 /DEF=Human DNA sequence from clone RP1-34P24 on chromosome 22 Contains a pseudogene similar to ribosomal protein L35, ESTs, STSs and GSSs /FEA=CDS /DB_XREF=gi:4107193 /UG=Hs.247778 Human DNA sequence from clone RP1-34P24 on chromosome 22 Contains a pseudogene similar to ribosomal protein L35, ESTs, STSs and GSSs </td> <td> Z82202 </td> <td> ribosomal protein L35 pseudogene 8 /// </td> <td> RPL35P8 /// RPL35P8 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -32.65 </td> <td> 98.05 </td> <td> -2.05 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 215464_s_at </td> <td> 215464_s_at </td> <td> AK001327 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001327.1 /DEF=Homo sapiens cDNA FLJ10465 fis, clone NT2RP1001616. /FEA=mRNA /DB_XREF=gi:7022515 /UG=Hs.12956 Tax interaction protein 1 </td> <td> AK001327 </td> <td> purinergic receptor P2X, ligand-gated ion channel, 5 /// P2RX5-TAX1BP3 readthrough (NMD candidate) /// Tax1 (human T-cell leukemia virus type I) binding protein 3 </td> <td> P2RX5 /// P2RX5-TAX1BP3 /// TAX1BP3 </td> <td> 5026 /// 30851 /// 100533970 </td> <td> NM_001204519 /// NM_001204520 /// NM_001204698 /// NM_002561 /// NM_014604 /// NM_175080 /// NM_175081 /// NR_037928 </td> <td> 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from direct assay /// 0007399 // nervous system development // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // non-traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030111 // regulation of Wnt signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0032864 // activation of Cdc42 GTPase activity // inferred from direct assay /// 0034220 // ion transmembrane transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0035590 // purinergic nucleotide receptor signaling pathway // inferred from electronic annotation /// 0035590 // purinergic nucleotide receptor signaling pathway // non-traceable author statement /// 0050850 // positive regulation of calcium-mediated signaling // non-traceable author statement /// 2000009 // negative regulation of protein localization to cell surface // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005639 // integral component of nuclear inner membrane // not recorded /// 0005737 // cytoplasm // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001614 // purinergic nucleotide receptor activity // non-traceable author statement /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004931 // extracellular ATP-gated cation channel activity // non-traceable author statement /// 0005216 // ion channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction </td> <td> 58.42 </td> <td> 424.11 </td> <td> 2.05 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212792_at </td> <td> 212792_at </td> <td> AB020684 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB020684.1 /DEF=Homo sapiens mRNA for KIAA0877 protein, partial cds. /FEA=mRNA /GEN=KIAA0877 /PROD=KIAA0877 protein /DB_XREF=gi:4240242 /UG=Hs.11217 KIAA0877 protein </td> <td> AB020684 </td> <td> dpy-19-like 1 (C. elegans) </td> <td> DPY19L1 </td> <td> 23333 </td> <td> NM_015283 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> 30.27 </td> <td> 148.29 </td> <td> 2.05 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212149_at </td> <td> 212149_at </td> <td> AW470003 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW470003 /FEA=EST /DB_XREF=gi:7040109 /DB_XREF=est:xr27f05.x1 /CLONE=IMAGE:2761377 /UG=Hs.84087 KIAA0143 protein </td> <td> AW470003 </td> <td> EFR3 homolog A (S. cerevisiae) </td> <td> EFR3A </td> <td> 23167 </td> <td> NM_015137 /// XM_005250849 </td> <td>  </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation </td> <td> 128.18 </td> <td> 464.01 </td> <td> 2.05 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 208595_s_at </td> <td> 208595_s_at </td> <td> NM_015845 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015845.1 /DEF=Homo sapiens methyl-CpG binding domain protein 1 (MBD1), transcript variant 2, mRNA.  /FEA=CDS /GEN=MBD1 /PROD=methyl-CpG binding domain protein 1, isoform 2 /DB_XREF=gi:7710136 /UG=Hs.6211 methyl-CpG binding domain protein 1 /FL=gb:AF078831.1 gb:NM_015845.1 </td> <td> NM_015845 </td> <td> methyl-CpG binding domain protein 1 </td> <td> MBD1 </td> <td> 4152 </td> <td> NM_001204136 /// NM_001204137 /// NM_001204138 /// NM_001204139 /// NM_001204140 /// NM_001204141 /// NM_001204142 /// NM_001204143 /// NM_001204151 /// NM_002384 /// NM_015844 /// NM_015845 /// NM_015846 /// NM_015847 /// XM_005258262 /// XM_005258264 /// XM_005258265 /// XM_005258268 /// XM_005258271 /// XM_005258272 /// XM_005258274 /// XM_006722452 /// XM_006722453 /// XM_006722454 /// XM_006722455 /// XM_006722456 /// XM_006722457 /// XM_006722458 /// XM_006722459 /// XM_006722460 /// XM_006722461 /// XM_006722462 /// XM_006722463 /// XM_006722464 /// XM_006722465 /// XM_006722466 /// XM_006722467 /// XM_006722468 /// XM_006722469 /// XM_006722470 /// XM_006722471 /// XM_006722472 /// XM_006722473 /// XM_006722474 /// XM_006722475 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from sequence or structural similarity /// 0016607 // nuclear speck // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008327 // methyl-CpG binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 26.75 </td> <td> 35.15 </td> <td> 2.05 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 201673_s_at </td> <td> 201673_s_at </td> <td> NM_002103 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002103.1 /DEF=Homo sapiens glycogen synthase 1 (muscle) (GYS1), mRNA. /FEA=mRNA /GEN=GYS1 /PROD=glycogen synthase 1 (muscle) /DB_XREF=gi:4504232 /UG=Hs.772 glycogen synthase 1 (muscle) /FL=gb:U32573.1 gb:BC002617.1 gb:J04501.1 gb:NM_002103.1 </td> <td> NM_002103 </td> <td> glycogen synthase 1 (muscle) </td> <td> GYS1 </td> <td> 2997 </td> <td> NM_001161587 /// NM_002103 /// NR_027763 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // inferred from direct assay /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016234 // inclusion body // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004373 // glycogen (starch) synthase activity // not recorded /// 0004373 // glycogen (starch) synthase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005536 // glucose binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0061547 // glycogen synthase activity, transferring glucose-1-phosphate // not recorded </td> <td> -39.10 </td> <td> 264.50 </td> <td> -2.04 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 209357_at </td> <td> 209357_at </td> <td> AF109161 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF109161.1 /DEF=Homo sapiens p35srj (MRG1) mRNA, complete cds. /FEA=mRNA /GEN=MRG1 /PROD=p35srj /DB_XREF=gi:4193945 /UG=Hs.82071 Cbpp300-interacting transactivator, with GluAsp-rich carboxy-terminal domain, 2 /FL=gb:BC004377.1 gb:AF109161.1 </td> <td> AF109161 </td> <td> Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 </td> <td> CITED2 </td> <td> 10370 </td> <td> NM_001168388 /// NM_001168389 /// NM_006079 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from direct assay /// 0001666 // response to hypoxia // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001829 // trophectodermal cell differentiation // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001889 // liver development // inferred from sequence or structural similarity /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002089 // lens morphogenesis in camera-type eye // inferred from electronic annotation /// 0002244 // hematopoietic progenitor cell differentiation // inferred from electronic annotation /// 0002521 // leukocyte differentiation // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003156 // regulation of organ formation // inferred from sequence or structural similarity /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007530 // sex determination // inferred from sequence or structural similarity /// 0007569 // cell aging // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0008584 // male gonad development // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0021602 // cranial nerve morphogenesis // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0030851 // granulocyte differentiation // inferred from electronic annotation /// 0034405 // response to fluid shear stress // inferred from mutant phenotype /// 0035360 // positive regulation of peroxisome proliferator activated receptor signaling pathway // inferred from direct assay /// 0035802 // adrenal cortex formation // inferred from sequence or structural similarity /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043627 // response to estrogen // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046697 // decidualization // inferred from electronic annotation /// 0048536 // spleen development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0060136 // embryonic process involved in female pregnancy // inferred from electronic annotation /// 0060349 // bone morphogenesis // inferred from electronic annotation /// 0060411 // cardiac septum morphogenesis // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060971 // embryonic heart tube left/right pattern formation // inferred from sequence or structural similarity /// 0061156 // pulmonary artery morphogenesis // inferred from electronic annotation /// 0061308 // cardiac neural crest cell development involved in heart development // inferred from electronic annotation /// 0061371 // determination of heart left/right asymmetry // inferred from electronic annotation /// 0061428 // negative regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from direct assay /// 0070986 // left/right axis specification // inferred from sequence or structural similarity /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 1900164 // nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry // inferred from sequence or structural similarity /// 2000020 // positive regulation of male gonad development // inferred from sequence or structural similarity /// 2001141 // regulation of RNA biosynthetic process // inferred from direct assay </td> <td> 0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from mutant phenotype </td> <td> 0001102 // RNA polymerase II activating transcription factor binding // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0035035 // histone acetyltransferase binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0050693 // LBD domain binding // inferred from physical interaction </td> <td> -38.85 </td> <td> 153.03 </td> <td> -2.04 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 221220_s_at </td> <td> 221220_s_at </td> <td> NM_017988 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017988.1 /DEF=Homo sapiens hypothetical protein FLJ10074 (FLJ10074), mRNA. /FEA=mRNA /GEN=FLJ10074 /PROD=hypothetical protein FLJ10074 /DB_XREF=gi:8922217 /UG=Hs.71573 hypothetical protein FLJ10074 /FL=gb:NM_017988.1 </td> <td> NM_017988 </td> <td> SCY1-like 2 (S. cerevisiae) </td> <td> SCYL2 </td> <td> 55681 </td> <td> NM_017988 /// XM_005269018 /// XM_006719497 </td> <td> 0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from direct assay /// 2000286 // receptor internalization involved in canonical Wnt signaling pathway // inferred from direct assay /// 2000370 // positive regulation of clathrin-mediated endocytosis // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0004672 // protein kinase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -40.47 </td> <td> 98.76 </td> <td> -2.04 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 203843_at </td> <td> 203843_at </td> <td> AA906056 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA906056 /FEA=EST /DB_XREF=gi:3041179 /DB_XREF=est:oj90d06.s1 /CLONE=IMAGE:1505579 /UG=Hs.173965 ribosomal protein S6 kinase, 90kD, polypeptide 3 /FL=gb:U08316.1 gb:NM_004586.1 </td> <td> AA906056 </td> <td> ribosomal protein S6 kinase, 90kDa, polypeptide 3 </td> <td> RPS6KA3 </td> <td> 6197 </td> <td> NM_004586 /// XM_005274573 /// XM_005274575 /// XM_005274576 /// XM_005274577 /// XM_006724505 /// XM_006724506 /// XM_006724507 </td> <td> 0001501 // skeletal system development // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043555 // regulation of translation in response to stress // traceable author statement /// 0043620 // regulation of DNA-templated transcription in response to stress // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045597 // positive regulation of cell differentiation // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -37.15 </td> <td> 239.53 </td> <td> -2.04 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 203007_x_at </td> <td> 203007_x_at </td> <td> AF077198 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF077198.1 /DEF=Homo sapiens lysophospholipase mRNA, complete cds. /FEA=mRNA /PROD=lysophospholipase /DB_XREF=gi:4679009 /UG=Hs.12540 lysophospholipase I /FL=gb:AF081281.1 gb:AF077198.1 gb:NM_006330.1 gb:AF291053.1 </td> <td> AF077198 </td> <td> lysophospholipase I </td> <td> LYPLA1 </td> <td> 10434 </td> <td> NM_001279356 /// NM_001279357 /// NM_001279358 /// NM_001279359 /// NM_001279360 /// NM_006330 /// XM_005251127 /// XM_006716417 /// XR_428339 </td> <td> 0002084 // protein depalmitoylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0042997 // negative regulation of Golgi to plasma membrane protein transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004622 // lysophospholipase activity // traceable author statement /// 0008474 // palmitoyl-(protein) hydrolase activity // inferred from mutant phenotype /// 0008474 // palmitoyl-(protein) hydrolase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 98.95 </td> <td> 352.50 </td> <td> 2.04 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212606_at </td> <td> 212606_at </td> <td> AL536319 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL536319 /FEA=EST /DB_XREF=gi:12799812 /DB_XREF=est:AL536319 /CLONE=CS0DF015YG13 (3 prime) /UG=Hs.198135 KIAA0993 protein </td> <td> AL536319 </td> <td> WD repeat and FYVE domain containing 3 </td> <td> WDFY3 </td> <td> 23001 </td> <td> NM_014991 /// NM_178583 /// NM_178585 /// XM_005262858 /// XM_006714151 /// XM_006714152 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016239 // positive regulation of macroautophagy // inferred from mutant phenotype /// 0035973 // aggrephagy // inferred from mutant phenotype </td> <td> 0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from mutant phenotype /// 0016020 // membrane // inferred from electronic annotation /// 0016234 // inclusion body // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0019898 // extrinsic component of membrane // inferred from direct assay /// 0034274 // Atg12-Atg5-Atg16 complex // inferred from direct assay </td> <td> 0003831 // beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005545 // 1-phosphatidylinositol binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 58.15 </td> <td> 166.00 </td> <td> 2.04 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 218910_at </td> <td> 218910_at </td> <td> NM_018075 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018075.1 /DEF=Homo sapiens hypothetical protein FLJ10375 (FLJ10375), mRNA. /FEA=mRNA /GEN=FLJ10375 /PROD=hypothetical protein FLJ10375 /DB_XREF=gi:8922383 /UG=Hs.319088 hypothetical protein FLJ10375 /FL=gb:NM_018075.1 </td> <td> NM_018075 </td> <td> anoctamin 10 </td> <td> ANO10 </td> <td> 55129 </td> <td> NM_001204831 /// NM_001204832 /// NM_001204833 /// NM_001204834 /// NM_018075 /// XM_005265265 </td> <td> 0006812 // cation transport // inferred from direct assay /// 0006821 // chloride transport // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 1902476 // chloride transmembrane transport // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005227 // calcium activated cation channel activity // inferred from direct assay /// 0005229 // intracellular calcium activated chloride channel activity // inferred from direct assay </td> <td> 38.97 </td> <td> 100.96 </td> <td> 2.04 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 211542_x_at </td> <td> 211542_x_at </td> <td> BC004334 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004334.1 /DEF=Homo sapiens, ribosomal protein S10, clone MGC:10943, mRNA, complete cds.  /FEA=mRNA /PROD=ribosomal protein S10 /DB_XREF=gi:13279259 /UG=Hs.76230 ribosomal protein S10 /FL=gb:BC004334.1 </td> <td> BC004334 </td> <td> ribosomal protein S10 </td> <td> RPS10 </td> <td> 6204 </td> <td> NM_001014 /// NM_001203245 /// NM_001204091 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015961 // diadenosine polyphosphate catabolic process // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0071544 // diphosphoinositol polyphosphate catabolic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from direct assay /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from electronic annotation /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052840 // inositol diphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052841 // inositol bisdiphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052842 // inositol diphosphate pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052843 // inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052844 // inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052845 // inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052846 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity // inferred from electronic annotation /// 0052847 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation /// 0052848 // inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation </td> <td> -1000.70 </td> <td> 5440.25 </td> <td> -2.04 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 211968_s_at </td> <td> 211968_s_at </td> <td> AI962933 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI962933 /FEA=EST /DB_XREF=gi:5755646 /DB_XREF=est:wt25a07.x1 /CLONE=IMAGE:2508468 /UG=Hs.289088 heat shock 90kD protein 1, alpha /FL=gb:NM_005348.1 </td> <td> AI962933 </td> <td> heat shock protein 90kDa alpha (cytosolic), class A member 1 </td> <td> HSP90AA1 </td> <td> 3320 </td> <td> NM_001017963 /// NM_005348 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0003009 // skeletal muscle contraction // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0006839 // mitochondrial transport // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009651 // response to salt stress // inferred from electronic annotation /// 0010592 // positive regulation of lamellipodium assembly // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0042026 // protein refolding // traceable author statement /// 0043627 // response to estrogen // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045040 // protein import into mitochondrial outer membrane // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045793 // positive regulation of cell size // inferred from electronic annotation /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051131 // chaperone-mediated protein complex assembly // inferred from direct assay /// 0060452 // positive regulation of cardiac muscle contraction // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0000166 // nucleotide binding // traceable author statement /// 0002134 // UTP binding // inferred from electronic annotation /// 0002135 // CTP binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017098 // sulfonylurea receptor binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0023026 // MHC class II protein complex binding // inferred from direct assay /// 0030235 // nitric-oxide synthase regulator activity // inferred from direct assay /// 0030911 // TPR domain binding // inferred from direct assay /// 0030911 // TPR domain binding // traceable author statement /// 0032564 // dATP binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // traceable author statement /// 0044325 // ion channel binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 205.72 </td> <td> 1257.54 </td> <td> 2.04 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 221739_at </td> <td> 221739_at </td> <td> AL524093 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL524093 /FEA=EST /DB_XREF=gi:12787586 /DB_XREF=est:AL524093 /CLONE=CS0DC002YI04 (5 prime) /UG=Hs.10927 hypothetical protein EUROIMAGE1875335 </td> <td> AL524093 </td> <td> chromosome 19 open reading frame 10 </td> <td> C19orf10 </td> <td> 56005 </td> <td> NM_019107 </td> <td> 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> -119.90 </td> <td> 604.62 </td> <td> -2.03 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 202276_at </td> <td> 202276_at </td> <td> NM_006304 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006304.1 /DEF=Homo sapiens Deleted in split-handsplit-foot 1 region (DSS1), mRNA.  /FEA=mRNA /GEN=DSS1 /PROD=deleted in split-handsplit-foot 1 region /DB_XREF=gi:5453639 /UG=Hs.85215 Deleted in split-handsplit-foot 1 region /FL=gb:U41515.1 gb:NM_006304.1 </td> <td> NM_006304 </td> <td> split hand/foot malformation (ectrodactyly) type 1 </td> <td> SHFM1 </td> <td> 7979 </td> <td> NM_006304 </td> <td> 0000724 // double-strand break repair via homologous recombination // not recorded /// 0006508 // proteolysis // inferred from direct assay </td> <td> 0000502 // proteasome complex // inferred from direct assay /// 0032039 // integrator complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay </td> <td> 103.45 </td> <td> 493.45 </td> <td> 2.03 </td> <td> 0.08 </td> <td> 0.12 </td> <td> -4.54 </td> </tr>
  <tr> <td> 200775_s_at </td> <td> 200775_s_at </td> <td> BC000355 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000355.1 /DEF=Homo sapiens, heterogeneous nuclear ribonucleoprotein K, clone MGC:8660, mRNA, complete cds.  /FEA=mRNA /PROD=heterogeneous nuclear ribonucleoprotein K /DB_XREF=gi:12653174 /UG=Hs.129548 heterogeneous nuclear ribonucleoprotein K /FL=gb:BC000355.1 gb:NM_002140.1 </td> <td> BC000355 </td> <td> heterogeneous nuclear ribonucleoprotein K </td> <td> HNRNPK </td> <td> 3190 </td> <td> NM_002140 /// NM_031262 /// NM_031263 /// XM_005251960 /// XM_005251961 /// XM_005251963 /// XM_005251964 /// XM_005251965 /// XM_005251966 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010988 // regulation of low-density lipoprotein particle clearance // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045716 // positive regulation of low-density lipoprotein particle receptor biosynthetic process // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from mutant phenotype /// 0072369 // regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0002102 // podosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from mutant phenotype /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -189.53 </td> <td> 1502.74 </td> <td> -2.03 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.54 </td> </tr>
  <tr> <td> 212194_s_at </td> <td> 212194_s_at </td> <td> AI418892 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI418892 /FEA=EST /DB_XREF=gi:4264823 /DB_XREF=est:tf43c01.x1 /CLONE=IMAGE:2098944 /UG=Hs.79305 KIAA0255 gene product </td> <td> AI418892 </td> <td> transmembrane 9 superfamily protein member 4 </td> <td> TM9SF4 </td> <td> 9777 </td> <td> NM_014742 /// XM_005260622 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -26.50 </td> <td> 132.55 </td> <td> -2.03 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.54 </td> </tr>
  <tr> <td> 218075_at </td> <td> 218075_at </td> <td> NM_015665 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015665.1 /DEF=Homo sapiens aladin (AAAS), mRNA. /FEA=mRNA /GEN=AAAS /PROD=aladin /DB_XREF=gi:12962936 /UG=Hs.125262 aladin /FL=gb:BC000659.1 gb:NM_015665.1 gb:AF226048.1 </td> <td> NM_015665 </td> <td> achalasia, adrenocortical insufficiency, alacrimia </td> <td> AAAS </td> <td> 8086 </td> <td> NM_001173466 /// NM_015665 /// XM_006719617 /// XM_006719618 /// XM_006719619 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from direct assay /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0009566 // fertilization // inferred from electronic annotation /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046822 // regulation of nucleocytoplasmic transport // non-traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 27.48 </td> <td> 60.79 </td> <td> 2.03 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.54 </td> </tr>
  <tr> <td> 209451_at </td> <td> 209451_at </td> <td> U59863 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U59863.1 /DEF=Human TRAF-interacting protein I-TRAF mRNA, complete cds. /FEA=mRNA /PROD=I-TRAF /DB_XREF=gi:1518017 /UG=Hs.146847 TRAF family member-associated NFKB activator /FL=gb:U59863.1 </td> <td> U59863 </td> <td> TRAF family member-associated NFKB activator </td> <td> TANK </td> <td> 10010 </td> <td> NM_001199135 /// NM_004180 /// NM_133484 /// XM_005246206 /// XM_005246207 /// XM_005246208 /// XM_005246210 /// XM_005246211 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 69.20 </td> <td> 173.57 </td> <td> 2.03 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.54 </td> </tr>
  <tr> <td> 221884_at </td> <td> 221884_at </td> <td> BE466525 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE466525 /FEA=EST /DB_XREF=gi:9512223 /DB_XREF=est:hx94b10.x1 /CLONE=IMAGE:3195451 /UG=Hs.234773 Homo sapiens cDNA: FLJ22281 fis, clone HRC03849, highly similar to S69002 human mRNA for AML1-EVI-1 </td> <td> BE466525 </td> <td> MDS1 and EVI1 complex locus </td> <td> MECOM </td> <td> 2122 </td> <td> NM_001105077 /// NM_001105078 /// NM_001163999 /// NM_001164000 /// NM_001205194 /// NM_004991 /// NM_005241 /// XM_005247213 /// XM_005247214 /// XM_005247215 /// XM_005247216 /// XM_005247219 /// XM_005247220 /// XM_005247221 /// XM_005247223 /// XM_005247224 /// XM_005247225 /// XM_005247226 /// XM_006713536 /// XM_006713537 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001780 // neutrophil homeostasis // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002318 // myeloid progenitor cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0030097 // hemopoiesis // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030853 // negative regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030900 // forebrain development // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043069 // negative regulation of programmed cell death // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from mutant phenotype /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048935 // peripheral nervous system neuron development // traceable author statement /// 0051726 // regulation of cell cycle // inferred from direct assay /// 0060039 // pericardium development // inferred from electronic annotation /// 0060216 // definitive hemopoiesis // inferred from electronic annotation /// 0071336 // regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071425 // hematopoietic stem cell proliferation // inferred from sequence or structural similarity /// 0072001 // renal system development // inferred from electronic annotation /// 2000872 // positive regulation of progesterone secretion // inferred from electronic annotation </td> <td> 0000118 // histone deacetylase complex // inferred from direct assay /// 0005604 // basement membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0000975 // regulatory region DNA binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070491 // repressing transcription factor binding // inferred from electronic annotation </td> <td> 36.05 </td> <td> 201.15 </td> <td> 2.03 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.54 </td> </tr>
  <tr> <td> 210470_x_at </td> <td> 210470_x_at </td> <td> BC003129 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003129.1 /DEF=Homo sapiens, non-POU-domain-containing, octamer-binding, clone MGC:3380, mRNA, complete cds.  /FEA=mRNA /PROD=non-POU-domain-containing, octamer-binding /DB_XREF=gi:13111916 /UG=Hs.172207 non-POU-domain-containing, octamer-binding /FL=gb:BC003129.1 </td> <td> BC003129 </td> <td> non-POU domain containing, octamer-binding </td> <td> NONO </td> <td> 4841 </td> <td> NM_001145408 /// NM_001145409 /// NM_001145410 /// NM_007363 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0008380 // RNA splicing // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0048511 // rhythmic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0042382 // paraspeckles // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001047 // core promoter binding // inferred from sequence or structural similarity /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -145.88 </td> <td> 703.56 </td> <td> -2.03 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.54 </td> </tr>
  <tr> <td> 210933_s_at </td> <td> 210933_s_at </td> <td> BC004908 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004908.1 /DEF=Homo sapiens, clone MGC:4655, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:4655) /DB_XREF=gi:13436196 /UG=Hs.326737 Homo sapiens, clone MGC:4655, mRNA, complete cds /FL=gb:BC004908.1 </td> <td> BC004908 </td> <td> fascin actin-bundling protein 1 </td> <td> FSCN1 </td> <td> 6624 </td> <td> NM_003088 </td> <td> 0008283 // cell proliferation // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0048870 // cell motility // inferred from direct assay /// 0051017 // actin filament bundle assembly // inferred from direct assay </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071437 // invadopodium // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from direct assay </td> <td> 78.10 </td> <td> 313.25 </td> <td> 2.03 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.54 </td> </tr>
  <tr> <td> 202597_at </td> <td> 202597_at </td> <td> AU144284 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU144284 /FEA=EST /DB_XREF=gi:11005805 /DB_XREF=est:AU144284 /CLONE=HEMBA1001439 /UG=Hs.11801 interferon regulatory factor 6 /FL=gb:AF027292.1 gb:NM_006147.1 </td> <td> AU144284 </td> <td> interferon regulatory factor 6 </td> <td> IRF6 </td> <td> 3664 </td> <td> NM_001206696 /// NM_006147 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043616 // keratinocyte proliferation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0048468 // cell development // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0060644 // mammary gland epithelial cell differentiation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000975 // regulatory region DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction </td> <td> 36.82 </td> <td> 148.06 </td> <td> 2.03 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.54 </td> </tr>
  <tr> <td> 211719_x_at </td> <td> 211719_x_at </td> <td> BC005858 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005858.1 /DEF=Homo sapiens, clone MGC:3255, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:3255) /DB_XREF=gi:13543399 /FL=gb:BC005858.1 </td> <td> BC005858 </td> <td> fibronectin 1 </td> <td> FN1 </td> <td> 2335 </td> <td> NM_002026 /// NM_054034 /// NM_212474 /// NM_212475 /// NM_212476 /// NM_212478 /// NM_212482 /// XM_005246397 /// XM_005246398 /// XM_005246399 /// XM_005246400 /// XM_005246401 /// XM_005246402 /// XM_005246403 /// XM_005246404 /// XM_005246405 /// XM_005246406 /// XM_005246407 /// XM_005246408 /// XM_005246409 /// XM_005246410 /// XM_005246411 /// XM_005246412 /// XM_005246413 /// XM_005246414 /// XM_005246415 /// XM_005246416 /// XM_005246417 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006953 // acute-phase response // inferred from electronic annotation /// 0007044 // cell-substrate junction assembly // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007161 // calcium-independent cell-matrix adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009611 // response to wounding // non-traceable author statement /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0018149 // peptide cross-linking // inferred from direct assay /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005577 // fibrinogen complex // inferred from direct assay /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0005178 // integrin binding // inferred from direct assay /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0008201 // heparin binding // non-traceable author statement /// 0016504 // peptidase activator activity // inferred from electronic annotation </td> <td> -466.10 </td> <td> 3238.70 </td> <td> -2.03 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.54 </td> </tr>
  <tr> <td> 203490_at </td> <td> 203490_at </td> <td> NM_001421 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001421.1 /DEF=Homo sapiens E74-like factor 4 (ets domain transcription factor) (ELF4), mRNA.  /FEA=mRNA /GEN=ELF4 /PROD=E74-like factor 4 (ets domain transcriptionfactor) /DB_XREF=gi:4503554 /UG=Hs.151139 E74-like factor 4 (ets domain transcription factor) /FL=gb:U32645.1 gb:AF000670.1 gb:NM_001421.1 </td> <td> NM_001421 </td> <td> E74-like factor 4 (ets domain transcription factor) </td> <td> ELF4 </td> <td> 2000 </td> <td> NM_001127197 /// NM_001421 /// XM_005262389 </td> <td> 0001787 // natural killer cell proliferation // inferred from sequence or structural similarity /// 0001866 // NK T cell proliferation // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0030154 // cell differentiation // not recorded /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016605 // PML body // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 27.58 </td> <td> 56.69 </td> <td> 2.03 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.54 </td> </tr>
  <tr> <td> 208675_s_at </td> <td> 208675_s_at </td> <td> D29643 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D29643.1 /DEF=Human mRNA for KIAA0115 gene, complete cds. /FEA=mRNA /GEN=KIAA0115 /DB_XREF=gi:473936 /UG=Hs.34789 dolichyl-diphosphooligosaccharide-protein glycosyltransferase /FL=gb:BC002594.1 gb:D29643.1 gb:NM_005216.1 </td> <td> D29643 </td> <td> dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) </td> <td> DDOST </td> <td> 1650 </td> <td> NM_005216 </td> <td> 0006412 // translation // traceable author statement /// 0006486 // protein glycosylation // inferred from sequence or structural similarity /// 0006487 // protein N-linked glycosylation // inferred from direct assay /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // inferred by curator /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0034097 // response to cytokine // inferred from direct assay /// 0042110 // T cell activation // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0008250 // oligosaccharyltransferase complex // inferred from sequence or structural similarity /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0004576 // oligosaccharyl transferase activity // inferred from sequence or structural similarity /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred by curator /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> -375.75 </td> <td> 1198.45 </td> <td> -2.03 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.54 </td> </tr>
  <tr> <td> 90610_at </td> <td> 90610_at </td> <td> AI654857 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI654857:wb65b10.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2310523 /clone_end=3' /gb=AI654857 /gi=4738836 /ug=Hs.160115 /len=621 </td> <td> AI654857 </td> <td> leucine-rich repeats and calponin homology (CH) domain containing 4 </td> <td> LRCH4 </td> <td> 4034 </td> <td> NM_001289934 /// NM_002319 /// XM_005250346 /// XM_005250347 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 40.85 </td> <td> 62.95 </td> <td> 2.03 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200956_s_at </td> <td> 200956_s_at </td> <td> BE795648 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE795648 /FEA=EST /DB_XREF=gi:10216846 /DB_XREF=est:601590631F1 /CLONE=IMAGE:3945006 /UG=Hs.79162 structure specific recognition protein 1 /FL=gb:BC005116.1 gb:M86737.1 gb:NM_003146.1 </td> <td> BE795648 </td> <td> structure specific recognition protein 1 </td> <td> SSRP1 </td> <td> 6749 </td> <td> NM_003146 /// XM_005274194 </td> <td> 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -43.43 </td> <td> 230.09 </td> <td> -2.02 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201403_s_at </td> <td> 201403_s_at </td> <td> NM_004528 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004528.1 /DEF=Homo sapiens microsomal glutathione S-transferase 3 (MGST3), mRNA. /FEA=mRNA /GEN=MGST3 /PROD=microsomal glutathione S-transferase 3 /DB_XREF=gi:4758713 /UG=Hs.111811 microsomal glutathione S-transferase 3 /FL=gb:BC000505.1 gb:BC003034.1 gb:AF026977.1 gb:NM_004528.1 </td> <td> NM_004528 </td> <td> microsomal glutathione S-transferase 3 </td> <td> MGST3 </td> <td> 4259 </td> <td> NM_004528 /// XM_005245174 </td> <td> 0006629 // lipid metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // not recorded /// 0055114 // oxidation-reduction process // traceable author statement /// 1901687 // glutathione derivative biosynthetic process // traceable author statement </td> <td> 0005635 // nuclear envelope // not recorded /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004364 // glutathione transferase activity // not recorded /// 0004601 // peroxidase activity // traceable author statement /// 0004602 // glutathione peroxidase activity // not recorded /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -40.10 </td> <td> 674.67 </td> <td> -2.02 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201091_s_at </td> <td> 201091_s_at </td> <td> BE748755 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE748755 /FEA=EST /DB_XREF=gi:10162747 /DB_XREF=est:601571933T1 /CLONE=IMAGE:3838737 /UG=Hs.278554 heterochromatin-like protein 1 /FL=gb:AF136630.1 gb:NM_016587.1 </td> <td> BE748755 </td> <td> chromobox homolog 3 </td> <td> CBX3 </td> <td> 11335 </td> <td> NM_007276 /// NM_016587 /// XM_005249611 /// XM_005249612 </td> <td> 0006338 // chromatin remodeling // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0048511 // rhythmic process // inferred from electronic annotation </td> <td> 0000779 // condensed chromosome, centromeric region // inferred from sequence or structural similarity /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from sequence or structural similarity /// 0005637 // nuclear inner membrane // non-traceable author statement /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005720 // nuclear heterochromatin // inferred from direct assay /// 0005819 // spindle // inferred from direct assay /// 0031618 // nuclear centromeric heterochromatin // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 1990226 // histone methyltransferase binding // inferred from physical interaction </td> <td> 59.00 </td> <td> 258.55 </td> <td> 2.02 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 209228_x_at </td> <td> 209228_x_at </td> <td> U42349 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U42349.1 /DEF=Human N33 mRNA, complete cds. /FEA=mRNA /GEN=N33 /DB_XREF=gi:1353672 /UG=Hs.71119 Putative prostate cancer tumor suppressor /FL=gb:U42349.1 gb:NM_006765.1 </td> <td> U42349 </td> <td> tumor suppressor candidate 3 </td> <td> TUSC3 </td> <td> 7991 </td> <td> NM_006765 /// NM_178234 /// XM_005273646 /// XM_005273647 /// XM_005273648 </td> <td> 0006487 // protein N-linked glycosylation // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015693 // magnesium ion transport // inferred from genetic interaction /// 0015693 // magnesium ion transport // inferred from mutant phenotype /// 0018279 // protein N-linked glycosylation via asparagine // inferred from sequence or structural similarity /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0050890 // cognition // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0008250 // oligosaccharyltransferase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from sequence or structural similarity /// 0015095 // magnesium ion transmembrane transporter activity // inferred from mutant phenotype </td> <td> 30.98 </td> <td> 128.54 </td> <td> 2.02 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 203133_at </td> <td> 203133_at </td> <td> NM_006808 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006808.1 /DEF=Homo sapiens protein translocation complex beta (SEC61B), mRNA. /FEA=mRNA /GEN=SEC61B /PROD=protein translocation complex beta /DB_XREF=gi:5803164 /UG=Hs.77028 protein translocation complex beta /FL=gb:BC001734.1 gb:L25085.1 gb:NM_006808.1 </td> <td> NM_006808 </td> <td> Sec61 beta subunit </td> <td> SEC61B </td> <td> 10952 </td> <td> NM_006808 </td> <td> 0000060 // protein import into nucleus, translocation // inferred from mutant phenotype /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006412 // translation // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0030970 // retrograde protein transport, ER to cytosol // inferred from mutant phenotype /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // non-traceable author statement /// 0031205 // endoplasmic reticulum Sec complex // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048408 // epidermal growth factor binding // inferred from physical interaction </td> <td> 173.38 </td> <td> 763.91 </td> <td> 2.02 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200984_s_at </td> <td> 200984_s_at </td> <td> X16447 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X16447.1 /DEF=Human mRNA for CD59, an LY-6-like protein regulating complement membrane attack.  /FEA=mRNA /PROD=precursor polypeptide (AA -25 to 103) /DB_XREF=gi:29805 /UG=Hs.119663 CD59 antigen p18-20 (antigen identified by monoclonal antibodies 16.3A5, EJ16, EJ30, EL32 and G344) /FL=gb:NM_000611.1 gb:M34671.1 </td> <td> X16447 </td> <td> CD59 molecule, complement regulatory protein </td> <td> CD59 </td> <td> 966 </td> <td> NM_000611 /// NM_001127223 /// NM_001127225 /// NM_001127226 /// NM_001127227 /// NM_203329 /// NM_203330 /// NM_203331 </td> <td> 0001775 // cell activation // not recorded /// 0001971 // negative regulation of activation of membrane attack complex // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030449 // regulation of complement activation // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement </td> <td> 0005576 // extracellular region // not recorded /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0031362 // anchored component of external side of plasma membrane // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043218 // compact myelin // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001848 // complement binding // not recorded /// 0005515 // protein binding // inferred from physical interaction </td> <td> 146.73 </td> <td> 1576.84 </td> <td> 2.02 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200610_s_at </td> <td> 200610_s_at </td> <td> NM_005381 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005381.1 /DEF=Homo sapiens nucleolin (NCL), mRNA. /FEA=mRNA /GEN=NCL /PROD=nucleolin /DB_XREF=gi:4885510 /UG=Hs.79110 nucleolin /FL=gb:NM_005381.1 </td> <td> NM_005381 </td> <td> nucleolin </td> <td> NCL </td> <td> 4691 </td> <td> NM_005381 </td> <td> 0001525 // angiogenesis // inferred from direct assay /// 1901838 // positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0042162 // telomeric DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 220.60 </td> <td> 1270.12 </td> <td> 2.01 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 217849_s_at </td> <td> 217849_s_at </td> <td> NM_006035 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006035.1 /DEF=Homo sapiens CDC42-binding protein kinase beta (DMPK-like) (CDC42BPB), mRNA.  /FEA=mRNA /GEN=CDC42BPB /PROD=CDC42-binding protein kinase beta (DMPK-like) /DB_XREF=gi:5174412 /UG=Hs.12908 CDC42-binding protein kinase beta (DMPK-like) /FL=gb:AF128625.1 gb:NM_006035.1 </td> <td> NM_006035 </td> <td> CDC42 binding protein kinase beta (DMPK-like) </td> <td> CDC42BPB </td> <td> 9578 </td> <td> NM_006035 /// XM_005268227 /// XM_005268228 /// XM_005268229 /// XM_005268230 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0007010 // cytoskeleton organization // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007588 // excretion // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0009235 // cobalamin metabolic process // traceable author statement /// 0015889 // cobalamin transport // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0031032 // actomyosin structure organization // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0031252 // cell leading edge // inferred from sequence or structural similarity /// 0042641 // actomyosin // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 58.90 </td> <td> 140.95 </td> <td> 2.01 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208904_s_at </td> <td> 208904_s_at </td> <td> BC000354 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000354.1 /DEF=Homo sapiens, ribosomal protein S28, clone MGC:8658, mRNA, complete cds.  /FEA=mRNA /PROD=ribosomal protein S28 /DB_XREF=gi:12653172 /UG=Hs.153177 ribosomal protein S28 /FL=gb:BC000354.1 </td> <td> BC000354 </td> <td> ribosomal protein S28 </td> <td> RPS28 </td> <td> 6234 </td> <td> NM_001031 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -374.18 </td> <td> 3334.11 </td> <td> -2.01 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 211938_at </td> <td> 211938_at </td> <td> BF247371 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF247371 /FEA=EST /DB_XREF=gi:11162727 /DB_XREF=est:601858130F1 /CLONE=IMAGE:4068630 /UG=Hs.283330 hypothetical protein PRO1843 </td> <td> BF247371 </td> <td> eukaryotic translation initiation factor 4B </td> <td> EIF4B </td> <td> 1975 </td> <td> NM_001417 /// NM_018507 /// XM_005268709 /// XM_006719274 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -151.80 </td> <td> 613.77 </td> <td> -2.01 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 37012_at </td> <td> 37012_at </td> <td> U03271 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. U03271:Human F-actin capping protein beta subunit mRNA, complete cds /cds=(0,818) /gb=U03271 /gi=595256 /ug=Hs.76368 /len=1077 </td> <td> U03271 </td> <td> capping protein (actin filament) muscle Z-line, beta </td> <td> CAPZB </td> <td> 832 </td> <td> NM_001206540 /// NM_001206541 /// NM_001282162 /// NM_004930 /// XM_006710938 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0031115 // negative regulation of microtubule polymerization // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0048747 // muscle fiber development // inferred from electronic annotation /// 0051016 // barbed-end actin filament capping // inferred from electronic annotation /// 0051693 // actin filament capping // inferred from electronic annotation /// 0090036 // regulation of protein kinase C signaling // inferred from electronic annotation </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0008290 // F-actin capping protein complex // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030017 // sarcomere // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071203 // WASH complex // inferred from direct assay </td> <td> 0003779 // actin binding // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation </td> <td> -72.05 </td> <td> 715.60 </td> <td> -2.01 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 210695_s_at </td> <td> 210695_s_at </td> <td> U13395 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U13395.1 /DEF=Human oxidoreductase (HHCMA56) mRNA, complete cds. /FEA=mRNA /GEN=HHCMA56 /PROD=oxidoreductase /DB_XREF=gi:538131 /UG=Hs.279790 putative oxidoreductase /FL=gb:U13395.1 </td> <td> U13395 </td> <td> WW domain containing oxidoreductase </td> <td> WWOX </td> <td> 51741 </td> <td> NM_001291997 /// NM_016373 /// NM_018560 /// NM_130788 /// NM_130790 /// NM_130791 /// NM_130792 /// NM_130844 /// NR_120435 /// NR_120436 /// XM_006721195 /// XR_243411 </td> <td> 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // traceable author statement /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from direct assay /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from electronic annotation /// 0097191 // extrinsic apoptotic signaling pathway // inferred from electronic annotation /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from sequence or structural similarity /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005902 // microvillus // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // non-traceable author statement /// 0016491 // oxidoreductase activity // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0046983 // protein dimerization activity // traceable author statement /// 0048037 // cofactor binding // traceable author statement /// 0050662 // coenzyme binding // traceable author statement </td> <td> -31.78 </td> <td> 136.74 </td> <td> -2.01 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 211961_s_at </td> <td> 211961_s_at </td> <td> AK000826 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK000826.1 /DEF=Homo sapiens cDNA FLJ20819 fis, clone ADSE00511. /FEA=mRNA /DB_XREF=gi:7021139 /UG=Hs.237955 hypothetical protein PRO2706 </td> <td> AK000826 </td> <td> RAB7A, member RAS oncogene family </td> <td> RAB7A </td> <td> 7879 </td> <td> NM_004637 </td> <td> 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006622 // protein targeting to lysosome // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // traceable author statement /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007174 // epidermal growth factor catabolic process // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype /// 0045453 // bone resorption // inferred from electronic annotation /// 0090382 // phagosome maturation // traceable author statement /// 0090383 // phagosome acidification // inferred from mutant phenotype /// 0090385 // phagosome-lysosome fusion // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097208 // alveolar lamellar body // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0019003 // GDP binding // inferred from direct assay /// 0048365 // Rac GTPase binding // inferred from electronic annotation </td> <td> 27.28 </td> <td> 314.24 </td> <td> 2.01 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 203394_s_at </td> <td> 203394_s_at </td> <td> BE973687 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE973687 /FEA=EST /DB_XREF=gi:10587023 /DB_XREF=est:601680868F1 /CLONE=IMAGE:3951041 /UG=Hs.250666 hairy (Drosophila)-homolog /FL=gb:AF264785.1 gb:NM_005524.2 </td> <td> BE973687 </td> <td> hes family bHLH transcription factor 1 </td> <td> HES1 </td> <td> 3280 </td> <td> NM_005524 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003143 // embryonic heart tube morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003266 // regulation of secondary heart field cardioblast proliferation // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007262 // STAT protein import into nucleus // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0016477 // cell migration // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021557 // oculomotor nerve development // inferred from electronic annotation /// 0021558 // trochlear nerve development // inferred from electronic annotation /// 0021575 // hindbrain morphogenesis // inferred from electronic annotation /// 0021861 // forebrain radial glial cell differentiation // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035909 // aorta morphogenesis // inferred from electronic annotation /// 0035910 // ascending aorta morphogenesis // inferred from sequence or structural similarity /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from sequence or structural similarity /// 0042668 // auditory receptor cell fate determination // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from sequence or structural similarity /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045598 // regulation of fat cell differentiation // inferred from electronic annotation /// 0045608 // negative regulation of auditory receptor cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045977 // positive regulation of mitotic cell cycle, embryonic // inferred from sequence or structural similarity /// 0046331 // lateral inhibition // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0048469 // cell maturation // inferred from electronic annotation /// 0048505 // regulation of timing of cell differentiation // inferred from electronic annotation /// 0048538 // thymus development // inferred from sequence or structural similarity /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from sequence or structural similarity /// 0060164 // regulation of timing of neuron differentiation // inferred from electronic annotation /// 0060253 // negative regulation of glial cell proliferation // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060675 // ureteric bud morphogenesis // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0061009 // common bile duct development // inferred from electronic annotation /// 0061106 // negative regulation of stomach neuroendocrine cell differentiation // inferred from electronic annotation /// 0061309 // cardiac neural crest cell development involved in outflow tract morphogenesis // inferred from sequence or structural similarity /// 0061626 // pharyngeal arch artery morphogenesis // inferred from sequence or structural similarity /// 0072012 // glomerulus vasculature development // inferred from electronic annotation /// 0072049 // comma-shaped body morphogenesis // inferred from electronic annotation /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072141 // renal interstitial cell development // inferred from electronic annotation /// 0072282 // metanephric nephron tubule morphogenesis // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation /// 0097084 // vascular smooth muscle cell development // inferred from sequence or structural similarity /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 2000227 // negative regulation of pancreatic A cell differentiation // inferred from electronic annotation /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype /// 2000974 // negative regulation of pro-B cell differentiation // inferred from mutant phenotype /// 2000978 // negative regulation of forebrain neuron differentiation // inferred from sequence or structural similarity /// 2000981 // negative regulation of inner ear receptor cell differentiation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0071820 // N-box binding // inferred from sequence or structural similarity </td> <td> -85.30 </td> <td> 228.55 </td> <td> -2.01 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 204967_at </td> <td> 204967_at </td> <td> NM_001649 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001649.1 /DEF=Homo sapiens apical protein, Xenopus laevis-like (APXL), mRNA. /FEA=mRNA /GEN=APXL /PROD=apical protein, Xenopus laevis-like /DB_XREF=gi:4502174 /UG=Hs.2391 apical protein, Xenopus laevis-like /FL=gb:NM_001649.1 </td> <td> NM_001649 </td> <td> shroom family member 2 </td> <td> SHROOM2 </td> <td> 357 </td> <td> NM_001649 /// XM_005274500 </td> <td> 0000902 // cell morphogenesis // inferred from direct assay /// 0000902 // cell morphogenesis // inferred from sequence or structural similarity /// 0002089 // lens morphogenesis in camera-type eye // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0008057 // eye pigment granule organization // inferred from sequence or structural similarity /// 0016477 // cell migration // inferred from sequence or structural similarity /// 0030835 // negative regulation of actin filament depolymerization // inferred from electronic annotation /// 0032401 // establishment of melanosome localization // inferred from sequence or structural similarity /// 0032438 // melanosome organization // inferred from sequence or structural similarity /// 0035725 // sodium ion transmembrane transport // traceable author statement /// 0043010 // camera-type eye development // inferred from sequence or structural similarity /// 0043482 // cellular pigment accumulation // inferred from sequence or structural similarity /// 0043583 // ear development // inferred from sequence or structural similarity /// 0045176 // apical protein localization // inferred from sequence or structural similarity /// 0045217 // cell-cell junction maintenance // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0051017 // actin filament bundle assembly // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from direct assay /// 0030864 // cortical actin cytoskeleton // inferred from sequence or structural similarity /// 0031941 // filamentous actin // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from sequence or structural similarity /// 0015280 // ligand-gated sodium channel activity // traceable author statement /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from sequence or structural similarity </td> <td> -24.40 </td> <td> 97.20 </td> <td> -2.01 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 36907_at </td> <td> 36907_at </td> <td> M88468 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. M88468:Homo sapiens mevalonate kinase mRNA, complete cds /cds=(91,1281) /gb=M88468 /gi=307197 /ug=Hs.75138 /len=1967 </td> <td> M88468 </td> <td> mevalonate kinase </td> <td> MVK </td> <td> 4598 </td> <td> NM_000431 /// NM_001114185 /// XM_005253883 /// XM_005253884 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from direct assay /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from direct assay /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019287 // isopentenyl diphosphate biosynthetic process, mevalonate pathway // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050728 // negative regulation of inflammatory response // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005777 // peroxisome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004496 // mevalonate kinase activity // inferred from direct assay /// 0004496 // mevalonate kinase activity // inferred from mutant phenotype /// 0004496 // mevalonate kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 40.68 </td> <td> 213.54 </td> <td> 2.01 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 202954_at </td> <td> 202954_at </td> <td> NM_007019 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007019.1 /DEF=Homo sapiens ubiquitin carrier protein E2-C (UBCH10), mRNA. /FEA=mRNA /GEN=UBCH10 /PROD=ubiquitin carrier protein E2-C /DB_XREF=gi:5902145 /UG=Hs.93002 ubiquitin carrier protein E2-C /FL=gb:U73379.1 gb:NM_007019.1 </td> <td> NM_007019 </td> <td> ubiquitin-conjugating enzyme E2C </td> <td> UBE2C </td> <td> 11065 </td> <td> NM_001281741 /// NM_001281742 /// NM_007019 /// NM_181799 /// NM_181800 /// NM_181801 /// NM_181802 /// NM_181803 /// NR_104036 /// NR_104037 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0007049 // cell cycle // non-traceable author statement /// 0007051 // spindle organization // non-traceable author statement /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0008054 // cyclin catabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0010458 // exit from mitosis // inferred from mutant phenotype /// 0010994 // free ubiquitin chain polymerization // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031536 // positive regulation of exit from mitosis // inferred from mutant phenotype /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051488 // activation of anaphase-promoting complex activity // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> -36.53 </td> <td> 269.04 </td> <td> -2.01 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201413_at </td> <td> 201413_at </td> <td> NM_000414 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000414.1 /DEF=Homo sapiens hydroxysteroid (17-beta) dehydrogenase 4 (HSD17B4), mRNA.  /FEA=mRNA /GEN=HSD17B4 /PROD=hydroxysteroid (17-beta) dehydrogenase 4 /DB_XREF=gi:4504504 /UG=Hs.75441 hydroxysteroid (17-beta) dehydrogenase 4 /FL=gb:BC003098.1 gb:NM_000414.1 </td> <td> NM_000414 </td> <td> hydroxysteroid (17-beta) dehydrogenase 4 </td> <td> HSD17B4 </td> <td> 3295 </td> <td> NM_000414 /// NM_001199291 /// NM_001199292 /// NM_001292027 /// NM_001292028 </td> <td> 0000038 // very long-chain fatty acid metabolic process // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from direct assay /// 0006699 // bile acid biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from direct assay /// 0008206 // bile acid metabolic process // traceable author statement /// 0008209 // androgen metabolic process // inferred from direct assay /// 0008210 // estrogen metabolic process // inferred from direct assay /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0033559 // unsaturated fatty acid metabolic process // traceable author statement /// 0036109 // alpha-linolenic acid metabolic process // traceable author statement /// 0036111 // very long-chain fatty-acyl-CoA metabolic process // inferred from direct assay /// 0036112 // medium-chain fatty-acyl-CoA metabolic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from mutant phenotype /// 0060009 // Sertoli cell development // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // non-traceable author statement /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005782 // peroxisomal matrix // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003857 // 3-hydroxyacyl-CoA dehydrogenase activity // inferred from direct assay /// 0003857 // 3-hydroxyacyl-CoA dehydrogenase activity // inferred from mutant phenotype /// 0003857 // 3-hydroxyacyl-CoA dehydrogenase activity // traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016508 // long-chain-enoyl-CoA hydratase activity // inferred from direct assay /// 0016508 // long-chain-enoyl-CoA hydratase activity // traceable author statement /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0032934 // sterol binding // inferred from electronic annotation /// 0033989 // 3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA hydratase activity // traceable author statement /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044594 // 17-beta-hydroxysteroid dehydrogenase (NAD+) activity // inferred from direct assay </td> <td> 30.50 </td> <td> 120.45 </td> <td> 2.01 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208270_s_at </td> <td> 208270_s_at </td> <td> NM_020216 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020216.2 /DEF=Homo sapiens arginyl aminopeptidase (aminopeptidase B) (RNPEP), mRNA.  /FEA=mRNA /GEN=RNPEP /PROD=arginyl aminopeptidase (aminopeptidase B) /DB_XREF=gi:13443030 /UG=Hs.283667 arginyl aminopeptidase (aminopeptidase B) /FL=gb:NM_020216.2 </td> <td> NM_020216 </td> <td> arginyl aminopeptidase (aminopeptidase B) </td> <td> RNPEP </td> <td> 6051 </td> <td> NM_020216 /// XM_005245418 /// XM_005245419 /// XM_005245420 /// XM_005245421 </td> <td> 0000209 // protein polyubiquitination // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0006282 // regulation of DNA repair // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006508 // proteolysis // inferred by curator /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation /// 0030154 // cell differentiation // non-traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0031371 // ubiquitin conjugating enzyme complex // inferred from direct assay /// 0035370 // UBC13-UEV1A complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004177 // aminopeptidase activity // inferred from sequence or structural similarity /// 0004177 // aminopeptidase activity // non-traceable author statement /// 0004301 // epoxide hydrolase activity // non-traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008235 // metalloexopeptidase activity // non-traceable author statement /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -46.55 </td> <td> 313.62 </td> <td> -2.01 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 218622_at </td> <td> 218622_at </td> <td> NM_024057 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024057.1 /DEF=Homo sapiens hypothetical protein MGC5585 (MGC5585), mRNA. /FEA=mRNA /GEN=MGC5585 /PROD=hypothetical protein MGC5585 /DB_XREF=gi:13129027 /UG=Hs.5152 hypothetical protein MGC5585 /FL=gb:BC000861.1 gb:NM_024057.1 </td> <td> NM_024057 </td> <td> nucleoporin 37kDa </td> <td> NUP37 </td> <td> 79023 </td> <td> NM_024057 /// XM_005269144 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031080 // nuclear pore outer ring // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 23.35 </td> <td> 151.38 </td> <td> 2.00 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 215438_x_at </td> <td> 215438_x_at </td> <td> BE906054 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE906054 /FEA=EST /DB_XREF=gi:10399395 /DB_XREF=est:601497073F1 /CLONE=IMAGE:3899034 /UG=Hs.2707 G1 to S phase transition 1 </td> <td> BE906054 </td> <td> G1 to S phase transition 1 </td> <td> GSPT1 </td> <td> 2935 </td> <td> NM_001130006 /// NM_001130007 /// NM_002094 /// XM_005255274 /// XM_005255275 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006415 // translational termination // inferred from mutant phenotype /// 0006479 // protein methylation // inferred from direct assay </td> <td> 0005622 // intracellular // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003747 // translation release factor activity // inferred from mutant phenotype /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -64.73 </td> <td> 393.46 </td> <td> -2.00 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201383_s_at </td> <td> 201383_s_at </td> <td> AL044170 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL044170 /FEA=EST /DB_XREF=gi:5935951 /DB_XREF=est:DKFZp434P2128_s1 /CLONE=DKFZp434P2128 /UG=Hs.277721 membrane component, chromosome 17, surface marker 2 (ovarian carcinoma antigen CA125) /FL=gb:D30756.1 gb:NM_005899.1 </td> <td> AL044170 </td> <td> neighbor of BRCA1 gene 1 </td> <td> NBR1 </td> <td> 4077 </td> <td> NM_001291571 /// NM_001291572 /// NM_005899 /// NM_031858 /// NM_031862 /// XM_006721903 </td> <td> 0016236 // macroautophagy // inferred from direct assay /// 0030500 // regulation of bone mineralization // inferred from sequence or structural similarity /// 0032872 // regulation of stress-activated MAPK cascade // inferred from sequence or structural similarity /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0051259 // protein oligomerization // inferred from direct assay </td> <td> 0000407 // pre-autophagosomal structure // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005776 // autophagic vacuole // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031430 // M band // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051019 // mitogen-activated protein kinase binding // inferred from sequence or structural similarity </td> <td> -44.10 </td> <td> 108.65 </td> <td> -2.00 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 213720_s_at </td> <td> 213720_s_at </td> <td> AI831675 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI831675 /FEA=EST /DB_XREF=gi:5452346 /DB_XREF=est:wj50g03.x1 /CLONE=IMAGE:2406292 /UG=Hs.78202 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 </td> <td> AI831675 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 </td> <td> SMARCA4 </td> <td> 6597 </td> <td> NM_001128844 /// NM_001128845 /// NM_001128846 /// NM_001128847 /// NM_001128848 /// NM_001128849 /// NM_003072 /// XM_005260028 /// XM_005260030 /// XM_005260031 /// XM_005260032 /// XM_005260033 /// XM_005260034 /// XM_005260035 /// XM_006722845 /// XM_006722846 /// XM_006722847 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001832 // blastocyst growth // inferred from electronic annotation /// 0001835 // blastocyst hatching // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003407 // neural retina development // inferred from expression pattern /// 0006200 // ATP catabolic process // inferred from genetic interaction /// 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred by curator /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0007070 // negative regulation of transcription from RNA polymerase II promoter during mitosis // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007403 // glial cell fate determination // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010424 // DNA methylation on cytosine within a CG sequence // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030900 // forebrain development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035887 // aortic smooth muscle cell differentiation // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0043923 // positive regulation by host of viral transcription // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048562 // embryonic organ morphogenesis // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0060318 // definitive erythrocyte differentiation // inferred from electronic annotation /// 0060347 // heart trabecula formation // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005719 // nuclear euchromatin // inferred from electronic annotation /// 0005726 // perichromatin fibrils // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from sequence or structural similarity /// 0071778 // WINAC complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // inferred from genetic interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042393 // histone binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction /// 0070577 // lysine-acetylated histone binding // inferred from direct assay </td> <td> 63.65 </td> <td> 248.60 </td> <td> 2.00 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 218216_x_at </td> <td> 218216_x_at </td> <td> NM_016638 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016638.1 /DEF=Homo sapiens SRp25 nuclear protein (LOC51329), mRNA. /FEA=mRNA /GEN=LOC51329 /PROD=SRp25 nuclear protein /DB_XREF=gi:7706183 /UG=Hs.103561 SRp25 nuclear protein /FL=gb:BC001958.1 gb:AB035384.1 gb:NM_016638.1 </td> <td> NM_016638 </td> <td> ADP-ribosylation factor-like 6 interacting protein 4 </td> <td> ARL6IP4 </td> <td> 51329 </td> <td> NM_001002251 /// NM_001002252 /// NM_001278378 /// NM_001278379 /// NM_001278380 /// NM_016638 /// NM_018694 /// NR_103512 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 57.27 </td> <td> 226.34 </td> <td> 2.00 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208328_s_at </td> <td> 208328_s_at </td> <td> NM_005587 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005587.1 /DEF=Homo sapiens MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A) (MEF2A), mRNA.  /FEA=mRNA /GEN=MEF2A /PROD=MADS box transcription enhancer factor 2,polypeptide A (myocyte enhancer factor 2A) /DB_XREF=gi:5031906 /UG=Hs.182280 MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A) /FL=gb:NM_005587.1 </td> <td> NM_005587 </td> <td> myocyte enhancer factor 2A </td> <td> MEF2A </td> <td> 4205 </td> <td> NM_001130926 /// NM_001130927 /// NM_001130928 /// NM_001171894 /// NM_005587 /// XM_005254914 /// XM_005254915 /// XM_005254916 /// XM_006720509 /// XM_006720510 /// XM_006720511 /// XM_006720512 /// XM_006720513 /// XM_006720514 /// XM_006720515 /// XM_006720516 /// XM_006720517 /// XM_006720518 /// XM_006720519 /// XM_006720520 /// XM_006720521 </td> <td> 0000002 // mitochondrial genome maintenance // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000165 // MAPK cascade // inferred from direct assay /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002467 // germinal center formation // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003138 // primary heart field specification // inferred from electronic annotation /// 0003139 // secondary heart field specification // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003185 // sinoatrial valve morphogenesis // inferred from electronic annotation /// 0003211 // cardiac ventricle formation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007517 // muscle organ development // non-traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007521 // muscle cell fate determination // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010694 // positive regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0014033 // neural crest cell differentiation // inferred from electronic annotation /// 0014898 // cardiac muscle hypertrophy in response to stress // inferred from electronic annotation /// 0021542 // dentate gyrus development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030220 // platelet formation // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035051 // cardiocyte differentiation // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation /// 0035984 // cellular response to trichostatin A // inferred from electronic annotation /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042100 // B cell proliferation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045652 // regulation of megakaryocyte differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048311 // mitochondrion distribution // inferred from sequence or structural similarity /// 0048666 // neuron development // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0055005 // ventricular cardiac myofibril assembly // inferred from sequence or structural similarity /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060025 // regulation of synaptic activity // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060297 // regulation of sarcomere organization // inferred from electronic annotation /// 0060536 // cartilage morphogenesis // inferred from electronic annotation /// 0061333 // renal tubule morphogenesis // inferred from electronic annotation /// 0061337 // cardiac conduction // inferred from sequence or structural similarity /// 0070375 // ERK5 cascade // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071498 // cellular response to fluid shear stress // inferred from electronic annotation /// 0071864 // positive regulation of cell proliferation in bone marrow // inferred from electronic annotation /// 0072102 // glomerulus morphogenesis // inferred from electronic annotation /// 0072160 // nephron tubule epithelial cell differentiation // inferred from electronic annotation /// 0090073 // positive regulation of protein homodimerization activity // inferred from electronic annotation /// 2000111 // positive regulation of macrophage apoptotic process // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation /// 2000987 // positive regulation of behavioral fear response // inferred from electronic annotation /// 2001013 // epithelial cell proliferation involved in renal tubule morphogenesis // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0030017 // sarcomere // inferred from electronic annotation </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0000987 // core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0001046 // core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0071837 // HMG box domain binding // inferred from electronic annotation </td> <td> -24.82 </td> <td> 45.76 </td> <td> -2.00 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200869_at </td> <td> 200869_at </td> <td> NM_000980 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000980.1 /DEF=Homo sapiens ribosomal protein L18a (RPL18A), mRNA. /FEA=mRNA /GEN=RPL18A /PROD=ribosomal protein L18a /DB_XREF=gi:11415025 /UG=Hs.163593 ribosomal protein L18a /FL=gb:NM_000980.1 gb:L05093.1 </td> <td> NM_000980 </td> <td> ribosomal protein L18a /// small nucleolar RNA, H/ACA box 68 </td> <td> RPL18A /// SNORA68 </td> <td> 6142 /// 26780 </td> <td> NM_000980 /// NR_000012 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -541.80 </td> <td> 2881.68 </td> <td> -2.00 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 217812_at </td> <td> 217812_at </td> <td> NM_016258 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016258.1 /DEF=Homo sapiens high-glucose-regulated protein 8 (HGRG8), mRNA. /FEA=mRNA /GEN=HGRG8 /PROD=high-glucose-regulated protein 8 /DB_XREF=gi:7705410 /UG=Hs.20993 high-glucose-regulated protein 8 /FL=gb:BC002559.1 gb:AF155095.1 gb:AF192968.1 gb:NM_016258.1 </td> <td> NM_016258 </td> <td> YTH domain family, member 2 </td> <td> YTHDF2 </td> <td> 51441 </td> <td> NM_001172828 /// NM_001173128 /// NM_016258 </td> <td> 0006959 // humoral immune response // traceable author statement /// 0043488 // regulation of mRNA stability // inferred from mutant phenotype </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 1990247 // N6-methyladenosine-containing RNA binding // inferred from direct assay </td> <td> 100.25 </td> <td> 407.97 </td> <td> 2.00 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201790_s_at </td> <td> 201790_s_at </td> <td> AW150953 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW150953 /FEA=EST /DB_XREF=gi:6198851 /DB_XREF=est:xg42f09.x1 /CLONE=IMAGE:2630249 /UG=Hs.11806 7-dehydrocholesterol reductase /FL=gb:BC000054.1 gb:AF034544.1 gb:AF067127.1 gb:AF096305.1 gb:NM_001360.1 </td> <td> AW150953 </td> <td> 7-dehydrocholesterol reductase </td> <td> DHCR7 </td> <td> 1717 </td> <td> NM_001163817 /// NM_001360 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from mutant phenotype /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045540 // regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005640 // nuclear outer membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0047598 // 7-dehydrocholesterol reductase activity // inferred from direct assay </td> <td> 38.25 </td> <td> 122.03 </td> <td> 2.00 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 206989_s_at </td> <td> 206989_s_at </td> <td> NM_004719 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004719.1 /DEF=Homo sapiens splicing factor, arginineserine-rich 2, interacting protein (SFRS2IP), mRNA.  /FEA=mRNA /GEN=SFRS2IP /PROD=splicing factor, arginineserine-rich 2,interacting protein /DB_XREF=gi:4759171 /UG=Hs.51957 splicing factor, arginineserine-rich 2, interacting protein /FL=gb:NM_004719.1 </td> <td> NM_004719 </td> <td> SR-related CTD-associated factor 11 </td> <td> SCAF11 </td> <td> 9169 </td> <td> NM_004719 /// XM_005269230 /// XM_006719692 </td> <td> 0000245 // spliceosomal complex assembly // inferred from direct assay /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 38.68 </td> <td> 178.16 </td> <td> 2.00 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 213407_at </td> <td> 213407_at </td> <td> AB023148 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB023148.1 /DEF=Homo sapiens mRNA for KIAA0931 protein, partial cds. /FEA=mRNA /GEN=KIAA0931 /PROD=KIAA0931 protein /DB_XREF=gi:4589505 /UG=Hs.173373 KIAA0931 protein </td> <td> AB023148 </td> <td> PH domain and leucine rich repeat protein phosphatase 2 </td> <td> PHLPP2 </td> <td> 23035 </td> <td> NM_001289003 /// NM_015020 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement </td> <td> 0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0042622 // photoreceptor outer segment membrane // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 29.43 </td> <td> 103.69 </td> <td> 2.00 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201498_at </td> <td> 201498_at </td> <td> AI160440 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI160440 /FEA=EST /DB_XREF=gi:3693820 /DB_XREF=est:qc08f12.x1 /CLONE=IMAGE:1709039 /UG=Hs.78683 ubiquitin specific protease 7 (herpes virus-associated) /FL=gb:NM_003470.1 </td> <td> AI160440 </td> <td> ubiquitin specific peptidase 7 (herpes virus-associated) </td> <td> USP7 </td> <td> 7874 </td> <td> NM_001286457 /// NM_001286458 /// NM_003470 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010216 // maintenance of DNA methylation // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation </td> <td> 0002039 // p53 binding // inferred from direct assay /// 0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation </td> <td> 29.55 </td> <td> 115.05 </td> <td> 1.99 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208742_s_at </td> <td> 208742_s_at </td> <td> U78303 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U78303.1 /DEF=Human 2HOR0202 mRNA, complete cds. /FEA=mRNA /PROD=2HOR0202 /DB_XREF=gi:6648546 /UG=Hs.23964 sin3-associated polypeptide, 18kD /FL=gb:NM_005870.2 gb:U96915.1 gb:AF153608.1 gb:U78303.1 </td> <td> U78303 </td> <td> Sin3A-associated protein, 18kDa </td> <td> SAP18 </td> <td> 10284 </td> <td> NM_005870 </td> <td> 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay </td> <td> 0000118 // histone deacetylase complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0061574 // ASAP complex // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -28.53 </td> <td> 517.54 </td> <td> -1.99 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 211205_x_at </td> <td> 211205_x_at </td> <td> U78577 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U78577.1 /DEF=Human 68 kDa type I phosphatidylinositol-4-phosphate 5-kinase alpha mRNA, clone PIP5KIa3, complete cds.  /FEA=mRNA /PROD=68 kDa type I phosphatidylinositol-4-phosphate5-kinase alpha /DB_XREF=gi:1743874 /UG=Hs.149255 phosphatidylinositol-4-phosphate 5-kinase, type I, alpha /FL=gb:U78577.1 </td> <td> U78577 </td> <td> phosphatidylinositol-4-phosphate 5-kinase, type I, alpha </td> <td> PIP5K1A </td> <td> 8394 </td> <td> NM_001135636 /// NM_001135637 /// NM_001135638 /// NM_003557 /// XM_005245525 /// XM_005245526 /// XM_005245527 /// XM_005245528 /// XM_005245529 /// XM_005245530 /// XM_005245531 /// XM_005245532 /// XM_006711563 /// XM_006711564 /// XM_006711565 /// XM_006711566 /// XM_006711567 /// XM_006711568 </td> <td> 0006644 // phospholipid metabolic process // traceable author statement /// 0006650 // glycerophospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006909 // phagocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from direct assay /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // non-traceable author statement /// 0016477 // cell migration // non-traceable author statement /// 0030216 // keratinocyte differentiation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0032863 // activation of Rac GTPase activity // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from direct assay /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // traceable author statement /// 0048041 // focal adhesion assembly // inferred from mutant phenotype /// 0060326 // cell chemotaxis // inferred from mutant phenotype /// 0072661 // protein targeting to plasma membrane // inferred from mutant phenotype /// 0097178 // ruffle assembly // inferred from mutant phenotype </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // traceable author statement /// 0030027 // lamellipodium // inferred from direct assay /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016307 // phosphatidylinositol phosphate kinase activity // inferred from electronic annotation /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from direct assay /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from direct assay </td> <td> -41.60 </td> <td> 60.93 </td> <td> -1.99 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208816_x_at </td> <td> 208816_x_at </td> <td> M62898 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M62898.1 /DEF=Human lipocortin (LIP) 2 pseudogene mRNA, complete cds-like region. /FEA=mRNA /DB_XREF=gi:187147 /UG=Hs.217493 annexin A2 /FL=gb:M62898.1 </td> <td> M62898 </td> <td> annexin A2 pseudogene 2 </td> <td> ANXA2P2 </td> <td> 304 </td> <td> NR_003573 </td> <td> 0043086 // negative regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation </td> <td> -158.62 </td> <td> 1284.36 </td> <td> -1.99 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 40189_at </td> <td> 40189_at </td> <td> M93651 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. M93651:Human set gene, complete cds /cds=(3,836) /gb=M93651 /gi=338038 /ug=Hs.145279 /len=2562 </td> <td> M93651 </td> <td> SET nuclear proto-oncogene /// SET-like protein </td> <td> SET /// SETSIP </td> <td> 6418 /// 646817 </td> <td> NM_001122821 /// NM_001248000 /// NM_001248001 /// NM_001287737 /// NM_003011 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006337 // nucleosome disassembly // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0035067 // negative regulation of histone acetylation // traceable author statement /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0045446 // endothelial cell differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050790 // regulation of catalytic activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004864 // protein phosphatase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0042393 // histone binding // traceable author statement </td> <td> 117.60 </td> <td> 526.60 </td> <td> 1.99 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200053_at </td> <td> 200053_at </td> <td> NM_004890 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004890.1 /DEF=Homo sapiens sperm associated antigen 7 (SPAG7), mRNA. /FEA=mRNA /GEN=SPAG7 /PROD=sperm associated antigen 7 /DB_XREF=gi:4757715 /UG=Hs.90436 sperm associated antigen 7 /FL=gb:AF047437.1 gb:NM_004890.1 </td> <td> NM_004890 </td> <td> sperm associated antigen 7 </td> <td> SPAG7 </td> <td> 9552 </td> <td> NM_004890 /// XM_005256865 /// XM_006721600 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation </td> <td> -84.93 </td> <td> 291.41 </td> <td> -1.99 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212581_x_at </td> <td> 212581_x_at </td> <td> BE561479 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE561479 /FEA=EST /DB_XREF=gi:9805199 /DB_XREF=est:601346543F1 /CLONE=IMAGE:3679498 /UG=Hs.169476 glyceraldehyde-3-phosphate dehydrogenase </td> <td> BE561479 </td> <td> glyceraldehyde-3-phosphate dehydrogenase </td> <td> GAPDH </td> <td> 2597 </td> <td> NM_001256799 /// NM_001289745 /// NM_001289746 /// NM_002046 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from sequence or structural similarity /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0035606 // peptidyl-cysteine S-trans-nitrosylation // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0051402 // neuron apoptotic process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097452 // GAIT complex // inferred from direct assay </td> <td> 0004365 // glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity // inferred from sequence or structural similarity /// 0004365 // glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0035605 // peptidyl-cysteine S-nitrosylase activity // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from physical interaction /// 0050661 // NADP binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> -1328.82 </td> <td> 4907.89 </td> <td> -1.99 </td> <td> 0.08 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 211750_x_at </td> <td> 211750_x_at </td> <td> BC005946 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005946.1 /DEF=Homo sapiens, clone MGC:14580, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:14580) /DB_XREF=gi:13543588 /FL=gb:BC005946.1 </td> <td> BC005946 </td> <td> tubulin, alpha 1c </td> <td> TUBA1C </td> <td> 84790 </td> <td> NM_032704 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // traceable author statement /// 0030705 // cytoskeleton-dependent intracellular transport // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051301 // cell division // traceable author statement /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 544.78 </td> <td> 3322.56 </td> <td> 1.99 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 204682_at </td> <td> 204682_at </td> <td> NM_000428 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000428.1 /DEF=Homo sapiens latent transforming growth factor beta binding protein 2 (LTBP2), mRNA.  /FEA=mRNA /GEN=LTBP2 /PROD=latent transforming growth factor beta bindingprotein 2 /DB_XREF=gi:4557732 /UG=Hs.83337 latent transforming growth factor beta binding protein 2 /FL=gb:NM_000428.1 </td> <td> NM_000428 </td> <td> latent transforming growth factor beta binding protein 2 </td> <td> LTBP2 </td> <td> 4053 </td> <td> NM_000428 </td> <td> 0006605 // protein targeting // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0009306 // protein secretion // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation </td> <td> -128.67 </td> <td> 1067.39 </td> <td> -1.99 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 211378_x_at </td> <td> 211378_x_at </td> <td> BC001224 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001224.1 /DEF=Homo sapiens, clone MGC:982, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:982) /DB_XREF=gi:12654762 /UG=Hs.267690 KIAA1228 protein /FL=gb:BC001224.1 </td> <td> BC001224 </td> <td> peptidyl-prolyl cis-trans isomerase A-like /// peptidylprolyl isomerase A (cyclophilin A) </td> <td> LOC101060363 /// PPIA </td> <td> 5478 /// 101060363 </td> <td> NM_021130 /// NM_203430 /// NM_203431 /// XM_003960117 /// XM_005246048 /// XM_005249791 /// XM_005275876 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0002576 // platelet degranulation // traceable author statement /// 0006278 // RNA-dependent DNA replication // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019061 // uncoating of virus // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019076 // viral release from host cell // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030260 // entry into host cell // traceable author statement /// 0034389 // lipid particle organization // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // traceable author statement /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0075713 // establishment of integrated proviral latency // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046790 // virion binding // non-traceable author statement /// 0051082 // unfolded protein binding // traceable author statement </td> <td> -1157.90 </td> <td> 4957.18 </td> <td> -1.99 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208655_at </td> <td> 208655_at </td> <td> BG530368 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG530368 /FEA=EST /DB_XREF=gi:13521905 /DB_XREF=est:602559112F1 /CLONE=IMAGE:4697115 /UG=Hs.79933 cyclin I /FL=gb:D50310.1 gb:BC000420.1 gb:BC004975.1 gb:NM_006835.1 gb:AF135162.1 </td> <td> BG530368 </td> <td> cyclin I </td> <td> CCNI </td> <td> 10983 </td> <td> NM_006835 </td> <td> 0007283 // spermatogenesis // non-traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td>  </td> <td>  </td> <td> -124.43 </td> <td> 920.36 </td> <td> -1.99 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 204252_at </td> <td> 204252_at </td> <td> M68520 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M68520.1 /DEF=Human cdc2-related protein kinase mRNA, complete cds. /FEA=mRNA /PROD=cdc2-related protein kinase /DB_XREF=gi:180177 /UG=Hs.19192 cyclin-dependent kinase 2 /FL=gb:BC003065.1 gb:M68520.1 gb:NM_001798.1 </td> <td> M68520 </td> <td> cyclin-dependent kinase 2 </td> <td> CDK2 </td> <td> 1017 </td> <td> NM_001290230 /// NM_001798 /// NM_052827 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000085 // mitotic G2 phase // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // non-traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007126 // meiotic nuclear division // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016572 // histone phosphorylation // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031571 // mitotic G1 DNA damage checkpoint // traceable author statement /// 0032298 // positive regulation of DNA-dependent DNA replication initiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0051298 // centrosome duplication // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0060968 // regulation of gene silencing // inferred from direct assay /// 0071732 // cellular response to nitric oxide // traceable author statement </td> <td> 0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0000793 // condensed chromosome // inferred from electronic annotation /// 0000805 // X chromosome // inferred from electronic annotation /// 0000806 // Y chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030332 // cyclin binding // inferred from direct assay /// 0035173 // histone kinase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 34.82 </td> <td> 137.11 </td> <td> 1.98 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 220008_at </td> <td> 220008_at </td> <td> NM_024776 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024776.1 /DEF=Homo sapiens hypothetical protein FLJ21140 (FLJ21140), mRNA. /FEA=mRNA /GEN=FLJ21140 /PROD=hypothetical protein FLJ21140 /DB_XREF=gi:13376128 /UG=Hs.143895 hypothetical protein FLJ21140 /FL=gb:NM_024776.1 </td> <td> NM_024776 </td> <td> pseudopodium-enriched atypical kinase 1 </td> <td> PEAK1 </td> <td> 79834 </td> <td> NM_024776 /// XM_005254670 /// XM_005254671 /// XM_005254672 /// XM_005254673 /// XM_005254674 /// XM_005254675 /// XM_006720691 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -29.97 </td> <td> 30.79 </td> <td> -1.98 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 218331_s_at </td> <td> 218331_s_at </td> <td> NM_017782 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017782.1 /DEF=Homo sapiens hypothetical protein FLJ20360 (FLJ20360), mRNA. /FEA=mRNA /GEN=FLJ20360 /PROD=hypothetical protein FLJ20360 /DB_XREF=gi:8923334 /UG=Hs.26434 hypothetical protein FLJ20360 /FL=gb:BC001759.1 gb:NM_017782.1 </td> <td> NM_017782 </td> <td> family with sequence similarity 208, member B </td> <td> FAM208B </td> <td> 54906 </td> <td> NM_017782 /// XM_005252474 /// XM_005252475 /// XM_005252476 /// XM_005252477 /// XM_005252478 /// XM_005252480 /// XM_005252481 /// XM_005252482 /// XM_005252483 /// XM_006717452 </td> <td>  </td> <td>  </td> <td>  </td> <td> 69.65 </td> <td> 173.00 </td> <td> 1.98 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 217803_at </td> <td> 217803_at </td> <td> NM_022130 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022130.1 /DEF=Homo sapiens Golgi protein (GPP34), mRNA. /FEA=mRNA /GEN=GPP34 /PROD=Golgi protein /DB_XREF=gi:11545858 /UG=Hs.18271 Golgi protein /FL=gb:NM_022130.1 </td> <td> NM_022130 </td> <td> golgi phosphoprotein 3 (coat-protein) </td> <td> GOLPH3 </td> <td> 64083 </td> <td> NM_022130 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0009101 // glycoprotein biosynthetic process // inferred from mutant phenotype /// 0009306 // protein secretion // inferred from mutant phenotype /// 0010467 // gene expression // inferred from mutant phenotype /// 0010821 // regulation of mitochondrion organization // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0030032 // lamellipodium assembly // inferred from mutant phenotype /// 0032008 // positive regulation of TOR signaling // inferred from mutant phenotype /// 0043001 // Golgi to plasma membrane protein transport // inferred from mutant phenotype /// 0045053 // protein retention in Golgi apparatus // inferred from mutant phenotype /// 0048194 // Golgi vesicle budding // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from mutant phenotype /// 0050901 // leukocyte tethering or rolling // inferred from mutant phenotype /// 0060352 // cell adhesion molecule production // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0031985 // Golgi cisterna // inferred from direct assay /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0070273 // phosphatidylinositol-4-phosphate binding // inferred from direct assay </td> <td> -109.62 </td> <td> 447.14 </td> <td> -1.98 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208809_s_at </td> <td> 208809_s_at </td> <td> AL136632 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136632.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564G182 (from clone DKFZp564G182); complete cds.  /FEA=mRNA /GEN=DKFZp564G182 /PROD=hypothetical protein /DB_XREF=gi:12052789 /UG=Hs.173685 hypothetical protein FLJ12619 /FL=gb:AL136632.1 </td> <td> AL136632 </td> <td> chromosome 6 open reading frame 62 </td> <td> C6orf62 </td> <td> 81688 </td> <td> NM_030939 /// XM_005249433 </td> <td>  </td> <td> 0005622 // intracellular // inferred from direct assay </td> <td>  </td> <td> 51.38 </td> <td> 368.84 </td> <td> 1.98 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 209171_at </td> <td> 209171_at </td> <td> AF219116 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF219116.1 /DEF=Homo sapiens inosine triphosphate pyrophosphatase (ITPA) mRNA, complete cds.  /FEA=mRNA /GEN=ITPA /PROD=inosine triphosphate pyrophosphatase /DB_XREF=gi:13398327 /UG=Hs.6817 putative oncogene protein hlc14-06-p /FL=gb:AF063607.1 gb:AF026816.2 gb:NM_025200.1 gb:AF219116.1 </td> <td> AF219116 </td> <td> inosine triphosphatase (nucleoside triphosphate pyrophosphatase) </td> <td> ITPA </td> <td> 3704 </td> <td> NM_001267623 /// NM_033453 /// NM_181493 /// NR_052000 /// NR_052001 /// NR_052002 /// XM_006723564 /// XM_006723565 </td> <td> 0006193 // ITP catabolic process // inferred from electronic annotation /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0009143 // nucleoside triphosphate catabolic process // inferred from electronic annotation /// 0009204 // deoxyribonucleoside triphosphate catabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051276 // chromosome organization // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0035870 // dITP diphosphatase activity // not recorded /// 0036220 // ITP diphosphatase activity // not recorded /// 0036222 // XTP diphosphatase activity // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047429 // nucleoside-triphosphate diphosphatase activity // inferred from electronic annotation </td> <td> -28.68 </td> <td> 172.04 </td> <td> -1.98 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 218473_s_at </td> <td> 218473_s_at </td> <td> NM_024656 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024656.1 /DEF=Homo sapiens hypothetical protein FLJ22329 (FLJ22329), mRNA. /FEA=mRNA /GEN=FLJ22329 /PROD=hypothetical protein FLJ22329 /DB_XREF=gi:13375904 /UG=Hs.61478 hypothetical protein FLJ22329 /FL=gb:NM_024656.1 </td> <td> NM_024656 </td> <td> collagen beta(1-O)galactosyltransferase 1 </td> <td> COLGALT1 </td> <td> 79709 </td> <td> NM_024656 /// XM_005260080 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0050211 // procollagen galactosyltransferase activity // inferred from electronic annotation </td> <td> -158.25 </td> <td> 449.05 </td> <td> -1.98 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200949_x_at </td> <td> 200949_x_at </td> <td> NM_001023 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001023.1 /DEF=Homo sapiens ribosomal protein S20 (RPS20), mRNA. /FEA=mRNA /GEN=RPS20 /PROD=ribosomal protein S20 /DB_XREF=gi:4506696 /UG=Hs.8102 ribosomal protein S20 /FL=gb:L06498.1 gb:NM_001023.1 </td> <td> NM_001023 </td> <td> ribosomal protein S20 /// small nucleolar RNA, C/D box 54 </td> <td> RPS20 /// SNORD54 </td> <td> 6224 /// 26795 </td> <td> NM_001023 /// NM_001146227 /// NR_002437 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -258.30 </td> <td> 2278.75 </td> <td> -1.98 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212050_at </td> <td> 212050_at </td> <td> AK026913 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026913.1 /DEF=Homo sapiens cDNA: FLJ23260 fis, clone COL05804, highly similar to HSU90911 Human clone 23652 mRNA sequence.  /FEA=mRNA /DB_XREF=gi:10439884 /UG=Hs.13996 Homo sapiens cDNA: FLJ23260 fis, clone COL05804, highly similar to HSU90911 Human clone 23652 mRNA sequence </td> <td> AK026913 </td> <td> WAS/WASL interacting protein family, member 2 </td> <td> WIPF2 </td> <td> 147179 </td> <td> NM_133264 /// XM_005257083 /// XM_005257084 </td> <td> 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 24.90 </td> <td> 144.07 </td> <td> 1.98 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 221892_at </td> <td> 221892_at </td> <td> AK024548 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024548.1 /DEF=Homo sapiens cDNA: FLJ20895 fis, clone ADKA03483. /FEA=mRNA /DB_XREF=gi:10436853 /UG=Hs.285737 Homo sapiens cDNA: FLJ20895 fis, clone ADKA03483 </td> <td> AK024548 </td> <td> hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) </td> <td> H6PD </td> <td> 9563 </td> <td> NM_001282587 /// NM_004285 /// XM_005263539 /// XM_005263540 /// XM_005263541 /// XM_006711052 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0006739 // NADP metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0097305 // response to alcohol // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004345 // glucose-6-phosphate dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017057 // 6-phosphogluconolactonase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0047936 // glucose 1-dehydrogenase [NAD(P)] activity // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation </td> <td> 36.62 </td> <td> 49.01 </td> <td> 1.98 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200083_at </td> <td> 200083_at </td> <td> AA621731 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA621731 /FEA=EST /DB_XREF=gi:2525670 /DB_XREF=est:af54h05.s1 /CLONE=IMAGE:1035513 /UG=Hs.12064 ubiquitin specific protease 22 </td> <td> AA621731 </td> <td> ubiquitin specific peptidase 22 </td> <td> USP22 </td> <td> 23326 </td> <td> NM_015276 /// XM_005256575 </td> <td> 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009790 // embryo development // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016574 // histone ubiquitination // inferred from direct assay /// 0016578 // histone deubiquitination // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from direct assay /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype </td> <td> 0000124 // SAGA complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0070461 // SAGA-type complex // inferred from direct assay </td> <td> 0003713 // transcription coactivator activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0010485 // H4 histone acetyltransferase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 63.52 </td> <td> 462.49 </td> <td> 1.98 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201833_at </td> <td> 201833_at </td> <td> NM_001527 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001527.1 /DEF=Homo sapiens histone deacetylase 2 (HDAC2), mRNA. /FEA=mRNA /GEN=HDAC2 /PROD=histone deacetylase 2 /DB_XREF=gi:4557640 /UG=Hs.3352 histone deacetylase 2 /FL=gb:U31814.1 gb:NM_001527.1 </td> <td> NM_001527 </td> <td> histone deacetylase 2 </td> <td> HDAC2 </td> <td> 3066 </td> <td> NM_001527 /// NR_033441 /// NR_073443 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006338 // chromatin remodeling // inferred by curator /// 0006344 // maintenance of chromatin silencing // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006476 // protein deacetylation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0009913 // epidermal cell differentiation // inferred from sequence or structural similarity /// 0010870 // positive regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0010977 // negative regulation of neuron projection development // inferred from sequence or structural similarity /// 0016358 // dendrite development // inferred from sequence or structural similarity /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from mutant phenotype /// 0021766 // hippocampus development // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0032967 // positive regulation of collagen biosynthetic process // inferred by curator /// 0034605 // cellular response to heat // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042493 // response to drug // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from sequence or structural similarity /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0045347 // negative regulation of MHC class II biosynthetic process // inferred by curator /// 0045786 // negative regulation of cell cycle // traceable author statement /// 0045862 // positive regulation of proteolysis // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred by curator /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred by curator /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0051896 // regulation of protein kinase B signaling // inferred from electronic annotation /// 0055013 // cardiac muscle cell development // inferred from electronic annotation /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060297 // regulation of sarcomere organization // inferred from electronic annotation /// 0060789 // hair follicle placode formation // inferred from sequence or structural similarity /// 0061029 // eyelid development in camera-type eye // inferred from sequence or structural similarity /// 0061198 // fungiform papilla formation // inferred from sequence or structural similarity /// 0070932 // histone H3 deacetylation // inferred from sequence or structural similarity /// 0070933 // histone H4 deacetylation // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from electronic annotation /// 0090311 // regulation of protein deacetylation // inferred from electronic annotation /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016580 // Sin3 complex // inferred from direct assay /// 0016581 // NuRD complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from electronic annotation /// 0035098 // ESC/E(Z) complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001047 // core promoter binding // inferred from electronic annotation /// 0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019213 // deacetylase activity // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0033558 // protein deacetylase activity // inferred from mutant phenotype /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0097372 // NAD-dependent histone deacetylase activity (H3-K18 specific) // inferred from electronic annotation </td> <td> 40.65 </td> <td> 471.05 </td> <td> 1.98 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201573_s_at </td> <td> 201573_s_at </td> <td> M75715 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M75715.1 /DEF=Human TB3-1 mRNA, complete cds. /FEA=mRNA /PROD=TB3-1 /DB_XREF=gi:338686 /UG=Hs.77324 eukaryotic translation termination factor 1 /FL=gb:U90176.1 gb:M75715.1 gb:NM_004730.1 </td> <td> M75715 </td> <td> eukaryotic translation termination factor 1 </td> <td> ETF1 </td> <td> 2107 </td> <td> NM_001256302 /// NM_001282185 /// NM_001291974 /// NM_001291975 /// NM_004730 /// XM_005271920 /// XM_005271921 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006449 // regulation of translational termination // traceable author statement /// 0006479 // protein methylation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // traceable author statement /// 0003747 // translation release factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008079 // translation termination factor activity // traceable author statement /// 0016149 // translation release factor activity, codon specific // inferred from electronic annotation /// 0043022 // ribosome binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -36.12 </td> <td> 266.39 </td> <td> -1.97 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208732_at </td> <td> 208732_at </td> <td> AI743756 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI743756 /FEA=EST /DB_XREF=gi:5112044 /DB_XREF=est:wg53e08.x1 /CLONE=IMAGE:2368838 /UG=Hs.78305 RAB2, member RAS oncogene family /FL=gb:NM_002865.1 gb:M28213.1 </td> <td> AI743756 </td> <td> RAB2A, member RAS oncogene family </td> <td> RAB2A </td> <td> 5862 </td> <td> NM_001242644 /// NM_002865 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0019003 // GDP binding // inferred from direct assay </td> <td> 34.20 </td> <td> 185.50 </td> <td> 1.97 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 221664_s_at </td> <td> 221664_s_at </td> <td> AF154005 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF154005.1 /DEF=Homo sapiens junction adhesion molecule mRNA, complete cds. /FEA=mRNA /PROD=junction adhesion molecule /DB_XREF=gi:5457118 /UG=Hs.286218 junctional adhesion molecule /FL=gb:AF154005.1 </td> <td> AF154005 </td> <td> F11 receptor </td> <td> F11R </td> <td> 50848 </td> <td> NM_016946 /// NM_144501 /// NM_144502 /// NM_144503 /// NM_144504 </td> <td> 0006954 // inflammatory response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0070830 // tight junction assembly // traceable author statement </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // traceable author statement /// 0005923 // tight junction // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -68.45 </td> <td> 240.20 </td> <td> -1.97 </td> <td> 0.09 </td> <td> 0.13 </td> <td> -4.55 </td> </tr>
  <tr> <td> 210664_s_at </td> <td> 210664_s_at </td> <td> AF021834 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF021834.1 /DEF=Homo sapiens tissue factor pathway inhibitor beta (TFPIbeta) mRNA, complete cds.  /FEA=mRNA /GEN=TFPIbeta /PROD=tissue factor pathway inhibitor beta /DB_XREF=gi:4103170 /UG=Hs.170279 tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) /FL=gb:AF021834.1 </td> <td> AF021834 </td> <td> tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) </td> <td> TFPI </td> <td> 7035 </td> <td> NM_001032281 /// NM_006287 /// XM_005246818 /// XM_005246819 /// XM_005246820 /// XM_006712720 </td> <td> 0007596 // blood coagulation // traceable author statement /// 0007598 // blood coagulation, extrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> -113.57 </td> <td> 385.16 </td> <td> -1.97 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200812_at </td> <td> 200812_at </td> <td> NM_006429 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006429.1 /DEF=Homo sapiens chaperonin containing TCP1, subunit 7 (eta) (CCT7), mRNA.  /FEA=mRNA /GEN=CCT7 /PROD=chaperonin containing TCP1, subunit 7 (eta) /DB_XREF=gi:5453606 /UG=Hs.108809 chaperonin containing TCP1, subunit 7 (eta) /FL=gb:AF026292.1 gb:NM_006429.1 </td> <td> NM_006429 </td> <td> chaperonin containing TCP1, subunit 7 (eta) </td> <td> CCT7 </td> <td> 10574 </td> <td> NM_001009570 /// NM_001166284 /// NM_001166285 /// NM_006429 /// NR_029402 /// NR_029403 </td> <td> 0006457 // protein folding // traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0002199 // zona pellucida receptor complex // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 45.95 </td> <td> 384.45 </td> <td> 1.97 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 210438_x_at </td> <td> 210438_x_at </td> <td> M25077 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M25077.1 /DEF=Human SS-ARo ribonucleoprotein autoantigen 60 kd subunit mRNA, complete cds.  /FEA=mRNA /DB_XREF=gi:387656 /UG=Hs.554 Sjogren syndrome antigen A2 (60kD, ribonucleoprotein autoantigen SS-ARo) /FL=gb:M25077.1 </td> <td> M25077 </td> <td> TROVE domain family, member 2 </td> <td> TROVE2 </td> <td> 6738 </td> <td> NM_001042369 /// NM_001042370 /// NM_001173524 /// NM_001173525 /// NM_004600 /// NR_033393 /// XM_006711495 /// XM_006711496 /// XM_006711497 </td> <td> 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0030030 // cell projection organization // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 52.38 </td> <td> 252.41 </td> <td> 1.97 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 209075_s_at </td> <td> 209075_s_at </td> <td> AY009128 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AY009128.1 /DEF=Homo sapiens ISCU2 (ISCU) mRNA, complete cds, alternatively spliced.  /FEA=mRNA /GEN=ISCU /PROD=ISCU2 /DB_XREF=gi:11545706 /UG=Hs.9908 nitrogen fixation cluster-like /FL=gb:AY009128.1 </td> <td> AY009128 </td> <td> iron-sulfur cluster assembly enzyme </td> <td> ISCU </td> <td> 23479 </td> <td> NM_014301 /// NM_213595 /// XM_005268760 /// XM_005268761 /// XM_006719315 /// XM_006719316 /// XR_429087 </td> <td> 0009399 // nitrogen fixation // traceable author statement /// 0016226 // iron-sulfur cluster assembly // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // inferred from direct assay </td> <td> 0005506 // iron ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0032947 // protein complex scaffold // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation </td> <td> 36.92 </td> <td> 362.84 </td> <td> 1.97 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200046_at </td> <td> 200046_at </td> <td> NM_001344 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001344.1 /DEF=Homo sapiens defender against cell death 1 (DAD1), mRNA. /FEA=mRNA /GEN=DAD1 /PROD=defender against cell death 1 /DB_XREF=gi:4503252 /UG=Hs.82890 defender against cell death 1 /FL=gb:NM_001344.1 gb:D15057.1 </td> <td> NM_001344 </td> <td> defender against cell death 1 </td> <td> DAD1 </td> <td> 1603 </td> <td> NM_001344 </td> <td> 0001824 // blastocyst development // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // inferred by curator /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0008250 // oligosaccharyltransferase complex // inferred from sequence or structural similarity /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004576 // oligosaccharyl transferase activity // inferred from sequence or structural similarity /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred by curator /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> 115.12 </td> <td> 1001.69 </td> <td> 1.96 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212052_s_at </td> <td> 212052_s_at </td> <td> AB014576 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB014576.1 /DEF=Homo sapiens mRNA for KIAA0676 protein, partial cds. /FEA=mRNA /GEN=KIAA0676 /PROD=KIAA0676 protein /DB_XREF=gi:3327165 /UG=Hs.155829 KIAA0676 protein </td> <td> AB014576 </td> <td> TBC1 domain family, member 9B (with GRAM domain) </td> <td> TBC1D9B </td> <td> 23061 </td> <td> NM_015043 /// NM_198868 </td> <td> 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation </td> <td> -29.70 </td> <td> 200.43 </td> <td> -1.96 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 216295_s_at </td> <td> 216295_s_at </td> <td> X81636 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X81636.1 /DEF=H.sapiens clathrin light chain a gene. /FEA=mRNA /DB_XREF=gi:704460 /UG=Hs.285688 H.sapiens clathrin light chain a gene </td> <td> X81636 </td> <td> clathrin, light chain A </td> <td> CLTA </td> <td> 1211 </td> <td> NM_001076677 /// NM_001184760 /// NM_001184761 /// NM_001184762 /// NM_001833 /// NM_007096 </td> <td> 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from sequence or structural similarity /// 0030118 // clathrin coat // non-traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // inferred from electronic annotation /// 0030132 // clathrin coat of coated pit // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071439 // clathrin complex // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032050 // clathrin heavy chain binding // inferred from physical interaction /// 0042277 // peptide binding // inferred from electronic annotation </td> <td> 67.10 </td> <td> 721.50 </td> <td> 1.96 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 38269_at </td> <td> 38269_at </td> <td> AL050147 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AL050147:Homo sapiens mRNA; cDNA DKFZp586E0820 (from clone DKFZp586E0820) /cds=(0,1630) /gb=AL050147 /gi=4884153 /ug=Hs.91146 /len=1837 </td> <td> AL050147 </td> <td> protein kinase D2 </td> <td> PRKD2 </td> <td> 25865 </td> <td> NM_001079880 /// NM_001079881 /// NM_001079882 /// NM_016457 /// XM_005258716 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from genetic interaction /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0002376 // immune system process // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0008219 // cell death // inferred from mutant phenotype /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0032743 // positive regulation of interleukin-2 production // inferred from sequence or structural similarity /// 0032757 // positive regulation of interleukin-8 production // inferred from mutant phenotype /// 0032793 // positive regulation of CREB transcription factor activity // inferred from genetic interaction /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from genetic interaction /// 0035556 // intracellular signal transduction // inferred from genetic interaction /// 0035556 // intracellular signal transduction // inferred from mutant phenotype /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from genetic interaction /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0038033 // positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway // inferred from genetic interaction /// 0038033 // positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from genetic interaction /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0045743 // positive regulation of fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from genetic interaction /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045785 // positive regulation of cell adhesion // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0050862 // positive regulation of T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0061154 // endothelial tube morphogenesis // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 1901727 // positive regulation of histone deacetylase activity // inferred from genetic interaction /// 1902533 // positive regulation of intracellular signal transduction // inferred from mutant phenotype /// 2000573 // positive regulation of DNA biosynthetic process // inferred from sequence or structural similarity /// 2001028 // positive regulation of endothelial cell chemotaxis // inferred from mutant phenotype </td> <td> 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -47.28 </td> <td> 312.99 </td> <td> -1.96 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 202696_at </td> <td> 202696_at </td> <td> NM_005109 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005109.1 /DEF=Homo sapiens oxidative-stress responsive 1 (OSR1), mRNA. /FEA=mRNA /GEN=OSR1 /PROD=oxidative-stress responsive 1 /DB_XREF=gi:4826877 /UG=Hs.95220 oxidative-stress responsive 1 /FL=gb:AB017642.1 gb:NM_005109.1 gb:AB029024.1 </td> <td> NM_005109 </td> <td> oxidative stress responsive 1 </td> <td> OXSR1 </td> <td> 9943 </td> <td> NM_005109 /// XM_005265638 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0023014 // signal transduction by phosphorylation // not recorded /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay </td> <td> 0005737 // cytoplasm // not recorded /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -35.65 </td> <td> 173.43 </td> <td> -1.96 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 221494_x_at </td> <td> 221494_x_at </td> <td> AF085358 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF085358.1 /DEF=Homo sapiens HSPC029 mRNA, complete cds. /FEA=mRNA /PROD=HSPC029 /DB_XREF=gi:5114050 /UG=Hs.283781 muscle specific gene /FL=gb:NM_013234.1 gb:BC001031.1 gb:AF315506.1 gb:AB019392.1 gb:AF077051.1 gb:AF085358.1 </td> <td> AF085358 </td> <td> eukaryotic translation initiation factor 3, subunit K </td> <td> EIF3K </td> <td> 27335 </td> <td> NM_013234 /// XM_006723147 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation </td> <td> -137.63 </td> <td> 715.01 </td> <td> -1.95 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 220028_at </td> <td> 220028_at </td> <td> NM_001106 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001106.2 /DEF=Homo sapiens activin A receptor, type IIB (ACVR2B), mRNA. /FEA=mRNA /GEN=ACVR2B /PROD=activin A type IIB receptor precursor /DB_XREF=gi:10862697 /UG=Hs.23994 activin A receptor, type IIB /FL=gb:NM_001106.2 </td> <td> NM_001106 </td> <td> activin A receptor, type IIB </td> <td> ACVR2B </td> <td> 93 </td> <td> NM_001106 /// XM_005265583 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001946 // lymphangiogenesis // inferred from sequence or structural similarity /// 0001974 // blood vessel remodeling // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from mutant phenotype /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // traceable author statement /// 0031016 // pancreas development // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0032924 // activin receptor signaling pathway // traceable author statement /// 0032927 // positive regulation of activin receptor signaling pathway // inferred from direct assay /// 0035265 // organ growth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0048617 // embryonic foregut morphogenesis // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060836 // lymphatic endothelial cell differentiation // inferred from sequence or structural similarity /// 0060840 // artery development // inferred from sequence or structural similarity /// 0060841 // venous blood vessel development // inferred from sequence or structural similarity /// 0061298 // retina vasculature development in camera-type eye // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from physical interaction </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004674 // protein serine/threonine kinase activity // inferred from mutant phenotype /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016362 // activin receptor activity, type II // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017002 // activin-activated receptor activity // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0034711 // inhibin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048185 // activin binding // inferred from electronic annotation </td> <td> -23.95 </td> <td> 78.70 </td> <td> -1.95 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 221817_at </td> <td> 221817_at </td> <td> AI684664 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI684664 /FEA=EST /DB_XREF=gi:4895958 /DB_XREF=est:wa73b12.x1 /CLONE=IMAGE:2301791 /UG=Hs.21701 linked to Surfeit genes in Fugu rubripes 2; LSFR2 gene 2 </td> <td> AI684664 </td> <td> dolichyldiphosphatase 1 </td> <td> DOLPP1 </td> <td> 57171 </td> <td> NM_001135917 /// NM_020438 /// NR_072983 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // not recorded /// 0006487 // protein N-linked glycosylation // inferred from sequence or structural similarity /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006489 // dolichyl diphosphate biosynthetic process // traceable author statement /// 0008610 // lipid biosynthetic process // not recorded /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // not recorded /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from sequence or structural similarity </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0047874 // dolichyldiphosphatase activity // not recorded /// 0047874 // dolichyldiphosphatase activity // inferred from sequence or structural similarity </td> <td> 34.88 </td> <td> 140.36 </td> <td> 1.95 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 202513_s_at </td> <td> 202513_s_at </td> <td> NM_006245 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006245.1 /DEF=Homo sapiens protein phosphatase 2, regulatory subunit B (B56), delta isoform (PPP2R5D), mRNA.  /FEA=mRNA /GEN=PPP2R5D /PROD=protein phosphatase 2, regulatory subunit B(B56), delta isoform /DB_XREF=gi:5453953 /UG=Hs.118244 protein phosphatase 2, regulatory subunit B (B56), delta isoform /FL=gb:BC001095.1 gb:L76702.1 gb:AB000634.1 gb:NM_006245.1 </td> <td> NM_006245 </td> <td> protein phosphatase 2, regulatory subunit B', delta </td> <td> PPP2R5D </td> <td> 5528 </td> <td> NM_001270476 /// NM_006245 /// NM_180976 /// NM_180977 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006096 // glycolytic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0016311 // dephosphorylation // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement </td> <td> 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // inferred from electronic annotation </td> <td> 42.10 </td> <td> 241.10 </td> <td> 1.95 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201152_s_at </td> <td> 201152_s_at </td> <td> N31913 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N31913 /FEA=EST /DB_XREF=gi:1152312 /DB_XREF=est:yy21f10.s1 /CLONE=IMAGE:271915 /UG=Hs.28578 muscleblind (Drosophila)-like /FL=gb:NM_021038.1 gb:AB007888.1 </td> <td> N31913 </td> <td> muscleblind-like splicing regulator 1 </td> <td> MBNL1 </td> <td> 4154 </td> <td> NM_021038 /// NM_207292 /// NM_207293 /// NM_207294 /// NM_207295 /// NM_207296 /// NM_207297 /// XM_005247457 /// XM_005247458 /// XM_005247459 /// XM_005247460 /// XM_005247461 /// XM_005247462 /// XM_005247463 /// XM_005247464 /// XM_005247465 /// XM_005247466 /// XM_005247467 /// XM_005247468 /// XM_005247469 /// XM_005247470 /// XM_005247471 /// XM_005247472 /// XM_005247473 /// XM_005247474 /// XM_005247475 /// XM_005247476 /// XM_005247477 /// XM_006713639 /// XM_006713640 /// XM_006713641 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007399 // nervous system development // inferred from sequence or structural similarity /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0030326 // embryonic limb morphogenesis // inferred from sequence or structural similarity /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0045445 // myoblast differentiation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 91.60 </td> <td> 897.15 </td> <td> 1.95 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208517_x_at </td> <td> 208517_x_at </td> <td> NM_001207 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001207.1 /DEF=Homo sapiens basic transcription factor 3 (BTF3), mRNA. /FEA=CDS /GEN=BTF3 /PROD=basic transcription factor 3 /DB_XREF=gi:4502464 /UG=Hs.101025 basic transcription factor 3 /FL=gb:NM_001207.1 </td> <td> NM_001207 </td> <td> basic transcription factor 3 </td> <td> BTF3 </td> <td> 689 </td> <td> NM_001037637 /// NM_001207 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -333.05 </td> <td> 2149.47 </td> <td> -1.95 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201338_x_at </td> <td> 201338_x_at </td> <td> NM_002097 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002097.1 /DEF=Homo sapiens general transcription factor IIIA (GTF3A), mRNA. /FEA=mRNA /GEN=GTF3A /PROD=general transcription factor IIIA /DB_XREF=gi:4753158 /UG=Hs.75113 general transcription factor IIIA /FL=gb:D32257.1 gb:NM_002097.1 </td> <td> NM_002097 </td> <td> general transcription factor IIIA </td> <td> GTF3A </td> <td> 2971 </td> <td> NM_002097 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0009303 // rRNA transcription // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 58.82 </td> <td> 318.91 </td> <td> 1.95 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212224_at </td> <td> 212224_at </td> <td> NM_000689 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_000689.1 /DEF=Homo sapiens aldehyde dehydrogenase 1, soluble (ALDH1), mRNA. /FEA=CDS /GEN=ALDH1 /PROD=aldehyde dehydrogenase 1, soluble /DB_XREF=gi:4502030 /UG=Hs.76392 aldehyde dehydrogenase 1 family, member A1 /FL=gb:AF003341.1 gb:NM_000689.1 </td> <td> NM_000689 </td> <td> aldehyde dehydrogenase 1 family, member A1 </td> <td> ALDH1A1 </td> <td> 216 </td> <td> NM_000689 </td> <td> 0006069 // ethanol oxidation // traceable author statement /// 0006081 // cellular aldehyde metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008218 // bioluminescence // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // traceable author statement /// 0042572 // retinol metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001758 // retinal dehydrogenase activity // inferred from electronic annotation /// 0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0004029 // aldehyde dehydrogenase (NAD) activity // not recorded /// 0005099 // Ras GTPase activator activity // traceable author statement /// 0005497 // androgen binding // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation </td> <td> 169.05 </td> <td> 494.25 </td> <td> 1.95 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200710_at </td> <td> 200710_at </td> <td> NM_000018 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000018.1 /DEF=Homo sapiens acyl-Coenzyme A dehydrogenase, very long chain (ACADVL), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=ACADVL /PROD=acyl-Coenzyme A dehydrogenase, very long chainprecursor /DB_XREF=gi:4557234 /UG=Hs.82208 acyl-Coenzyme A dehydrogenase, very long chain /FL=gb:D43682.1 gb:BC000399.1 gb:NM_000018.1 </td> <td> NM_000018 </td> <td> acyl-CoA dehydrogenase, very long chain </td> <td> ACADVL </td> <td> 37 </td> <td> NM_000018 /// NM_001033859 /// NM_001270447 /// NM_001270448 /// XM_006721516 </td> <td> 0001659 // temperature homeostasis // inferred from sequence or structural similarity /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015980 // energy derivation by oxidation of organic compounds // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from sequence or structural similarity /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045717 // negative regulation of fatty acid biosynthetic process // inferred from sequence or structural similarity /// 0046322 // negative regulation of fatty acid oxidation // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0090181 // regulation of cholesterol metabolic process // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay </td> <td> 0003995 // acyl-CoA dehydrogenase activity // traceable author statement /// 0004466 // long-chain-acyl-CoA dehydrogenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation </td> <td> -29.02 </td> <td> 270.24 </td> <td> -1.95 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200782_at </td> <td> 200782_at </td> <td> NM_001154 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001154.2 /DEF=Homo sapiens annexin A5 (ANXA5), mRNA. /FEA=mRNA /GEN=ANXA5 /PROD=annexin V /DB_XREF=gi:4809273 /UG=Hs.300711 annexin A5 /FL=gb:BC001429.1 gb:BC004993.1 gb:M18366.1 gb:J03745.1 gb:M21731.1 gb:M19384.1 gb:D00172.1 gb:NM_001154.2 </td> <td> NM_001154 </td> <td> annexin A5 </td> <td> ANXA5 </td> <td> 308 </td> <td> NM_001154 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0050819 // negative regulation of coagulation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072563 // endothelial microparticle // inferred from electronic annotation </td> <td> 0004859 // phospholipase inhibitor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005543 // phospholipid binding // traceable author statement /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay </td> <td> -299.30 </td> <td> 1723.75 </td> <td> -1.95 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 202112_at </td> <td> 202112_at </td> <td> NM_000552 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000552.2 /DEF=Homo sapiens von Willebrand factor (VWF), mRNA. /FEA=mRNA /GEN=VWF /PROD=von Willebrand factor precursor /DB_XREF=gi:9257255 /UG=Hs.110802 von Willebrand factor /FL=gb:NM_000552.2 </td> <td> NM_000552 </td> <td> von Willebrand factor </td> <td> VWF </td> <td> 7450 </td> <td> NM_000552 </td> <td> 0001889 // liver development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007596 // blood coagulation // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0007597 // blood coagulation, intrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from mutant phenotype /// 0009611 // response to wounding // traceable author statement /// 0030168 // platelet activation // inferred from direct assay /// 0030168 // platelet activation // non-traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0031589 // cell-substrate adhesion // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031091 // platelet alpha granule // non-traceable author statement /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0033093 // Weibel-Palade body // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001948 // glycoprotein binding // inferred from direct assay /// 0002020 // protease binding // inferred from direct assay /// 0002020 // protease binding // inferred from physical interaction /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0019865 // immunoglobulin binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from direct assay </td> <td> -378.60 </td> <td> 2115.12 </td> <td> -1.95 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 215416_s_at </td> <td> 215416_s_at </td> <td> AC004472 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AC004472 /DEF=Homo sapiens chromosome 9, P1 clone 11659 /FEA=CDS_5 /DB_XREF=gi:2984582 /UG=Hs.3439 stomatin-like 2 </td> <td> AC004472 </td> <td> stomatin (EPB72)-like 2 </td> <td> STOML2 </td> <td> 30968 </td> <td> NM_001287031 /// NM_001287032 /// NM_001287033 /// NM_013442 </td> <td> 0006851 // mitochondrial calcium ion transport // inferred from mutant phenotype /// 0006874 // cellular calcium ion homeostasis // inferred from mutant phenotype /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0010876 // lipid localization // inferred from sequence or structural similarity /// 0010918 // positive regulation of mitochondrial membrane potential // inferred from mutant phenotype /// 0032623 // interleukin-2 production // inferred from sequence or structural similarity /// 0034982 // mitochondrial protein processing // inferred from sequence or structural similarity /// 0035710 // CD4-positive, alpha-beta T cell activation // inferred from sequence or structural similarity /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred from mutant phenotype /// 0050852 // T cell receptor signaling pathway // inferred from mutant phenotype /// 0051259 // protein oligomerization // inferred from direct assay /// 0090297 // positive regulation of mitochondrial DNA replication // inferred from mutant phenotype /// 1900210 // positive regulation of cardiolipin metabolic process // inferred from mutant phenotype /// 1990046 // stress-induced mitochondrial fusion // inferred from sequence or structural similarity </td> <td> 0001772 // immunological synapse // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008180 // COP9 signalosome // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019897 // extrinsic component of plasma membrane // inferred from direct assay /// 0042101 // T cell receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 1901612 // cardiolipin binding // inferred from direct assay </td> <td> -47.10 </td> <td> 257.48 </td> <td> -1.94 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 221536_s_at </td> <td> 221536_s_at </td> <td> AL136897 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136897.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434E248 (from clone DKFZp434E248); complete cds.  /FEA=mRNA /GEN=DKFZp434E248 /PROD=hypothetical protein /DB_XREF=gi:12053290 /UG=Hs.301724 Homo sapiens mRNA; cDNA DKFZp434E248 (from clone DKFZp434E248); complete cds /FL=gb:AL136897.1 </td> <td> AL136897 </td> <td> large 60S subunit nuclear export GTPase 1 </td> <td> LSG1 </td> <td> 55341 </td> <td> NM_018385 </td> <td> 0006184 // GTP catabolic process // not recorded /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0042254 // ribosome biogenesis // not recorded /// 0051168 // nuclear export // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // not recorded /// 0015030 // Cajal body // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 35.43 </td> <td> 158.21 </td> <td> 1.94 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 211284_s_at </td> <td> 211284_s_at </td> <td> BC000324 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000324.1 /DEF=Homo sapiens, Similar to granulin, clone MGC:8480, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to granulin /DB_XREF=gi:12653114 /UG=Hs.180577 granulin /FL=gb:BC000324.1 </td> <td> BC000324 </td> <td> granulin </td> <td> GRN </td> <td> 2896 </td> <td> NM_001012479 /// NM_002087 /// XM_005257253 </td> <td> 0001835 // blastocyst hatching // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -51.75 </td> <td> 219.28 </td> <td> -1.94 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 206015_s_at </td> <td> 206015_s_at </td> <td> NM_014947 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014947.1 /DEF=Homo sapiens KIAA1041 protein (KIAA1041), mRNA. /FEA=mRNA /GEN=KIAA1041 /PROD=KIAA1041 protein /DB_XREF=gi:7662455 /UG=Hs.26023 KIAA1041 protein /FL=gb:AB028964.1 gb:NM_014947.1 </td> <td> NM_014947 </td> <td> forkhead box J3 </td> <td> FOXJ3 </td> <td> 22887 </td> <td> NM_001198850 /// NM_001198851 /// NM_001198852 /// NM_014947 /// XM_005270632 /// XM_006710458 /// XM_006710459 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0009790 // embryo development //  /// 0009888 // tissue development // not recorded /// 0045893 // positive regulation of transcription, DNA-templated // not recorded </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008301 // DNA binding, bending // not recorded /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -50.10 </td> <td> 181.78 </td> <td> -1.94 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201639_s_at </td> <td> 201639_s_at </td> <td> NM_013291 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013291.1 /DEF=Homo sapiens cleavage and polyadenylation specific factor 1, 160kD subunit (CPSF1), mRNA.  /FEA=mRNA /GEN=CPSF1 /PROD=cleavage and polyadenylation specific factor 1,160kD subunit /DB_XREF=gi:9558724 /UG=Hs.83727 cleavage and polyadenylation specific factor 1, 160kD subunit /FL=gb:U37012.1 gb:AB046744.1 gb:NM_013291.1 </td> <td> NM_013291 </td> <td> cleavage and polyadenylation specific factor 1, 160kDa /// microRNA 1234 /// microRNA 6849 /// microRNA 939 </td> <td> CPSF1 /// MIR1234 /// MIR6849 /// MIR939 </td> <td> 29894 /// 100126351 /// 100302196 /// 102466749 </td> <td> NM_013291 /// NR_030635 /// NR_031600 /// NR_106908 /// XM_006716548 /// XM_006716549 /// XM_006716550 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // inferred from direct assay /// 0006379 // mRNA cleavage // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 32.25 </td> <td> 136.85 </td> <td> 1.94 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 221861_at </td> <td> 221861_at </td> <td> AL157484 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL157484.1 /DEF=Homo sapiens mRNA; cDNA DKFZp762M127 (from clone DKFZp762M127). /FEA=mRNA /DB_XREF=gi:7018527 /UG=Hs.22483 Homo sapiens mRNA; cDNA DKFZp762M127 (from clone DKFZp762M127) </td> <td> AL157484 </td> <td> arrestin, beta 1 </td> <td> ARRB1 </td> <td> 408 </td> <td> NM_004041 /// NM_020251 /// XM_005273997 /// XM_005273998 /// XM_006718552 /// XM_006718553 /// XM_006718554 /// XM_006718555 </td> <td> 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0002031 // G-protein coupled receptor internalization // inferred from mutant phenotype /// 0002092 // positive regulation of receptor internalization // inferred from mutant phenotype /// 0006309 // apoptotic DNA fragmentation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007602 // phototransduction // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0032717 // negative regulation of interleukin-8 production // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034260 // negative regulation of GTPase activity // inferred from electronic annotation /// 0034393 // positive regulation of smooth muscle cell apoptotic process // inferred from electronic annotation /// 0035025 // positive regulation of Rho protein signal transduction // inferred from mutant phenotype /// 0035066 // positive regulation of histone acetylation // inferred from mutant phenotype /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0042699 // follicle-stimulating hormone signaling pathway // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043149 // stress fiber assembly // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0061024 // membrane organization // traceable author statement /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0090240 // positive regulation of histone H4 acetylation // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0000785 // chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005765 // lysosomal membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004857 // enzyme inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from mutant phenotype /// 0005159 // insulin-like growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from electronic annotation /// 0031434 // mitogen-activated protein kinase kinase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031691 // alpha-1A adrenergic receptor binding // inferred from electronic annotation /// 0031692 // alpha-1B adrenergic receptor binding // inferred from electronic annotation /// 0031701 // angiotensin receptor binding // inferred from physical interaction /// 0031762 // follicle-stimulating hormone receptor binding // inferred from electronic annotation /// 0031896 // V2 vasopressin receptor binding // inferred from electronic annotation /// 0035612 // AP-2 adaptor complex binding // inferred from electronic annotation /// 0035615 // clathrin adaptor activity // inferred from electronic annotation /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from mutant phenotype /// 0044325 // ion channel binding // inferred from electronic annotation /// 0045309 // protein phosphorylated amino acid binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation </td> <td> -49.45 </td> <td> 227.35 </td> <td> -1.93 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 204019_s_at </td> <td> 204019_s_at </td> <td> NM_015677 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015677.1 /DEF=Homo sapiens hypothetical protein (DKFZP586F1318), mRNA. /FEA=mRNA /GEN=DKFZP586F1318 /PROD=hypothetical protein /DB_XREF=gi:7661669 /UG=Hs.25213 hypothetical protein /FL=gb:NM_015677.1 </td> <td> NM_015677 </td> <td> SH3 and SYLF domain containing 1 </td> <td> SH3YL1 </td> <td> 26751 </td> <td> NM_001159597 /// NM_001282682 /// NM_001282687 /// NM_015677 /// NR_104223 /// NR_104224 /// NR_104225 /// NR_104226 /// NR_104227 </td> <td> 0006661 // phosphatidylinositol biosynthetic process // inferred from electronic annotation /// 1900027 // regulation of ruffle assembly // inferred from electronic annotation </td> <td> 0032587 // ruffle membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from direct assay </td> <td> 32.33 </td> <td> 102.99 </td> <td> 1.93 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 214317_x_at </td> <td> 214317_x_at </td> <td> BE348997 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE348997 /FEA=EST /DB_XREF=gi:9260850 /DB_XREF=est:ht47e11.x1 /CLONE=IMAGE:3149900 /UG=Hs.180920 ribosomal protein S9 </td> <td> BE348997 </td> <td> ribosomal protein S9 </td> <td> RPS9 </td> <td> 6203 </td> <td> NM_001013 /// XM_005259135 /// XM_005259136 /// XM_005277084 /// XM_005277085 /// XM_005277274 /// XM_005277315 /// XM_005277316 /// XM_005278287 /// XM_005278288 /// XM_006725876 /// XM_006725877 /// XM_006725964 /// XM_006725965 /// XM_006726063 /// XM_006726064 /// XM_006726164 /// XM_006726165 /// XM_006726201 /// XM_006726202 /// XR_243946 /// XR_243947 /// XR_254260 /// XR_254311 /// XR_254323 /// XR_254324 /// XR_254517 /// XR_254518 /// XR_430207 /// XR_430911 /// XR_430953 /// XR_430986 /// XR_430987 /// XR_430988 /// XR_431006 /// XR_431007 /// XR_431008 /// XR_431025 /// XR_431026 /// XR_431027 /// XR_431056 /// XR_431057 /// XR_431058 /// XR_431067 /// XR_431068 /// XR_431069 /// XR_431090 /// XR_431099 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006417 // regulation of translation // inferred from mutant phenotype /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0045182 // translation regulator activity // inferred from mutant phenotype </td> <td> -173.80 </td> <td> 658.73 </td> <td> -1.93 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 210987_x_at </td> <td> 210987_x_at </td> <td> M19267 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M19267.1 /DEF=Human tropomyosin mRNA, complete cds. /FEA=mRNA /DB_XREF=gi:339943 /UG=Hs.77899 tropomyosin 1 (alpha) /FL=gb:M19267.1 </td> <td> M19267 </td> <td> tropomyosin 1 (alpha) </td> <td> TPM1 </td> <td> 7168 </td> <td> NM_000366 /// NM_001018004 /// NM_001018005 /// NM_001018006 /// NM_001018007 /// NM_001018008 /// NM_001018020 /// XM_005254637 /// XM_005254638 /// XM_005254639 /// XM_005254640 /// XM_005254641 /// XM_005254643 /// XM_005254644 /// XM_005254645 /// XM_005254646 /// XM_005254647 /// XM_005254648 /// XM_005254649 /// XM_005254650 /// XM_005254651 /// XM_005254652 /// XM_005254653 /// XM_006720667 /// XM_006720668 /// XM_006720669 /// XR_429470 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0003065 // positive regulation of heart rate by epinephrine // inferred from sequence or structural similarity /// 0006413 // translational initiation // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006937 // regulation of muscle contraction // traceable author statement /// 0007010 // cytoskeleton organization // traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0030049 // muscle filament sliding // inferred from sequence or structural similarity /// 0030049 // muscle filament sliding // traceable author statement /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0031529 // ruffle organization // inferred from sequence or structural similarity /// 0032781 // positive regulation of ATPase activity // inferred from sequence or structural similarity /// 0034614 // cellular response to reactive oxygen species // inferred from expression pattern /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0045214 // sarcomere organization // inferred from mutant phenotype /// 0045785 // positive regulation of cell adhesion // inferred from sequence or structural similarity /// 0051496 // positive regulation of stress fiber assembly // inferred from sequence or structural similarity /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from mutant phenotype /// 0060048 // cardiac muscle contraction // inferred from mutant phenotype </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005862 // muscle thin filament tropomyosin // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030017 // sarcomere // traceable author statement /// 0031941 // filamentous actin // inferred from electronic annotation /// 0032059 // bleb // inferred from mutant phenotype /// 0032587 // ruffle membrane // inferred from direct assay </td> <td> 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // traceable author statement </td> <td> -214.00 </td> <td> 1812.97 </td> <td> -1.93 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 202520_s_at </td> <td> 202520_s_at </td> <td> NM_000249 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000249.1 /DEF=Homo sapiens mutL (E. coli) homolog 1 (colon cancer, nonpolyposis type 2) (MLH1), mRNA.  /FEA=mRNA /GEN=MLH1 /PROD=mutL homolog 1 /DB_XREF=gi:4557756 /UG=Hs.57301 mutL (E. coli) homolog 1 (colon cancer, nonpolyposis type 2) /FL=gb:NM_000249.1 gb:U07343.1 gb:U07418.1 </td> <td> NM_000249 </td> <td> mutL homolog 1 </td> <td> MLH1 </td> <td> 4292 </td> <td> NM_000249 /// NM_001167617 /// NM_001167618 /// NM_001167619 /// NM_001258271 /// NM_001258273 /// NM_001258274 /// XM_005265161 /// XM_005265163 /// XM_005265164 /// XM_005265166 /// XR_427268 </td> <td> 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // inferred from electronic annotation /// 0000712 // resolution of meiotic recombination intermediates // inferred from electronic annotation /// 0002204 // somatic recombination of immunoglobulin genes involved in immune response // inferred from electronic annotation /// 0006200 // ATP catabolic process // not recorded /// 0006281 // DNA repair // inferred from electronic annotation /// 0006298 // mismatch repair // inferred from genetic interaction /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007060 // male meiosis chromosome segregation // inferred from electronic annotation /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0007129 // synapsis // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination //  /// 0007140 // male meiosis // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0016446 // somatic hypermutation of immunoglobulin genes // not recorded /// 0016447 // somatic recombination of immunoglobulin gene segments // inferred from electronic annotation /// 0043060 // meiotic metaphase I plate congression // inferred from electronic annotation /// 0045132 // meiotic chromosome segregation // inferred from electronic annotation /// 0045190 // isotype switching // inferred from electronic annotation /// 0045950 // negative regulation of mitotic recombination // inferred from electronic annotation /// 0048477 // oogenesis // inferred from electronic annotation /// 0051257 // spindle midzone assembly involved in meiosis // inferred from electronic annotation </td> <td> 0000793 // condensed chromosome // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0000795 // synaptonemal complex // not recorded /// 0001673 // male germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005712 // chiasma // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0032300 // mismatch repair complex // inferred from electronic annotation /// 0032300 // mismatch repair complex //  /// 0032389 // MutLalpha complex // not recorded /// 0032390 // MutLbeta complex // </td> <td> 0003697 // single-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // not recorded /// 0030983 // mismatched DNA binding // inferred from electronic annotation /// 0032137 // guanine/thymine mispair binding // inferred from electronic annotation /// 0032407 // MutSalpha complex binding // inferred from direct assay /// 0043566 // structure-specific DNA binding // inferred from electronic annotation </td> <td> 30.58 </td> <td> 267.54 </td> <td> 1.93 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 214452_at </td> <td> 214452_at </td> <td> NM_005504 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_005504.1 /DEF=Homo sapiens branched chain aminotransferase 1, cytosolic (BCAT1), mRNA.  /FEA=CDS /GEN=BCAT1 /PROD=branched chain aminotransferase 1, cytosolic /DB_XREF=gi:5031606 /UG=Hs.157205 branched chain aminotransferase 1, cytosolic /FL=gb:U21551.1 gb:NM_005504.1 </td> <td> NM_005504 </td> <td> branched chain amino-acid transaminase 1, cytosolic </td> <td> BCAT1 </td> <td> 586 </td> <td> NM_001178091 /// NM_001178092 /// NM_001178093 /// NM_001178094 /// NM_005504 /// XM_005253460 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009081 // branched-chain amino acid metabolic process // inferred from electronic annotation /// 0009082 // branched-chain amino acid biosynthetic process // inferred from electronic annotation /// 0009083 // branched-chain amino acid catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004084 // branched-chain-amino-acid transaminase activity // not recorded /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0052654 // L-leucine transaminase activity // inferred from electronic annotation /// 0052655 // L-valine transaminase activity // inferred from electronic annotation /// 0052656 // L-isoleucine transaminase activity // inferred from electronic annotation </td> <td> -74.68 </td> <td> 258.71 </td> <td> -1.93 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200598_s_at </td> <td> 200598_s_at </td> <td> AI582238 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI582238 /FEA=EST /DB_XREF=gi:4568135 /DB_XREF=est:tq65c10.x1 /CLONE=IMAGE:2213682 /UG=Hs.82689 tumor rejection antigen (gp96) 1 /FL=gb:NM_003299.1 </td> <td> AI582238 </td> <td> heat shock protein 90kDa beta (Grp94), member 1 /// microRNA 3652 </td> <td> HSP90B1 /// MIR3652 </td> <td> 7184 /// 100500842 </td> <td> NM_003299 /// NR_037425 </td> <td> 0001666 // response to hypoxia // inferred from direct assay /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // non-traceable author statement /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031247 // actin rod assembly // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051208 // sequestering of calcium ion // non-traceable author statement /// 0071318 // cellular response to ATP // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from direct assay /// 0046790 // virion binding // inferred from physical interaction /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -194.53 </td> <td> 1035.66 </td> <td> -1.93 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212348_s_at </td> <td> 212348_s_at </td> <td> AB011173 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB011173.1 /DEF=Homo sapiens mRNA for KIAA0601 protein, partial cds. /FEA=mRNA /GEN=KIAA0601 /PROD=KIAA0601 protein /DB_XREF=gi:3043725 /UG=Hs.174174 KIAA0601 protein </td> <td> AB011173 </td> <td> lysine (K)-specific demethylase 1A </td> <td> KDM1A </td> <td> 23028 </td> <td> NM_001009999 /// NM_015013 /// XM_005245786 /// XM_006710472 /// XM_006710473 /// XM_006710474 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006482 // protein demethylation // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010725 // regulation of primitive erythrocyte differentiation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030851 // granulocyte differentiation // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from mutant phenotype /// 0033169 // histone H3-K9 demethylation // inferred from direct assay /// 0034720 // histone H3-K4 demethylation // inferred from direct assay /// 0043392 // negative regulation of DNA binding // inferred by curator /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0045648 // positive regulation of erythrocyte differentiation // inferred from electronic annotation /// 0045654 // positive regulation of megakaryocyte differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046886 // positive regulation of hormone biosynthetic process // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051572 // negative regulation of histone H3-K4 methylation // inferred from electronic annotation /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from electronic annotation /// 0055001 // muscle cell development // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 1902166 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from mutant phenotype /// 2000179 // positive regulation of neural precursor cell proliferation // inferred from electronic annotation /// 2000648 // positive regulation of stem cell proliferation // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0001085 // RNA polymerase II transcription factor binding // inferred from electronic annotation /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0032451 // demethylase activity // inferred from mutant phenotype /// 0032452 // histone demethylase activity // inferred from direct assay /// 0032453 // histone demethylase activity (H3-K4 specific) // inferred from direct assay /// 0032454 // histone demethylase activity (H3-K9 specific) // inferred from direct assay /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from direct assay /// 0043426 // MRF binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity /// 0050660 // flavin adenine dinucleotide binding // inferred from direct assay /// 0050681 // androgen receptor binding // inferred from direct assay </td> <td> 58.75 </td> <td> 229.82 </td> <td> 1.93 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212357_at </td> <td> 212357_at </td> <td> AI096888 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI096888 /FEA=EST /DB_XREF=gi:3446470 /DB_XREF=est:qb58f08.x1 /CLONE=IMAGE:1704327 /UG=Hs.75400 KIAA0280 protein </td> <td> AI096888 </td> <td> family with sequence similarity 168, member A </td> <td> FAM168A </td> <td> 23201 </td> <td> NM_001286050 /// NM_001286051 /// NM_015159 /// XM_005273852 /// XM_006718482 </td> <td>  </td> <td>  </td> <td>  </td> <td> 24.65 </td> <td> 31.48 </td> <td> 1.92 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208540_x_at </td> <td> 208540_x_at </td> <td> NM_021039 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021039.1 /DEF=Homo sapiens S100 calcium-binding protein A14 (calgizzarin) (S100A14), mRNA.  /FEA=CDS /GEN=S100A14 /PROD=S100 calcium-binding protein A14 (calgizzarin) /DB_XREF=gi:10567825 /UG=Hs.247697 S100 calcium-binding protein A14 (calgizzarin) /FL=gb:NM_021039.1 </td> <td> NM_021039 </td> <td> S100 calcium binding protein A11 pseudogene 1 /// </td> <td> S100A11P1 /// S100A11P1 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 43.15 </td> <td> 372.02 </td> <td> 1.92 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201659_s_at </td> <td> 201659_s_at </td> <td> NM_001177 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001177.2 /DEF=Homo sapiens ADP-ribosylation factor-like 1 (ARL1), mRNA. /FEA=mRNA /GEN=ARL1 /PROD=ADP-ribosylation factor-like 1 /DB_XREF=gi:4755126 /UG=Hs.242894 ADP-ribosylation factor-like 1 /FL=gb:NM_001177.2 gb:L28997.1 </td> <td> NM_001177 </td> <td> ADP-ribosylation factor-like 1 </td> <td> ARL1 </td> <td> 400 </td> <td> NM_001177 /// XM_005268869 </td> <td> 0006184 // GTP catabolic process // inferred from direct assay /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0009404 // toxin metabolic process // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0031584 // activation of phospholipase D activity // inferred from direct assay /// 0034067 // protein localization to Golgi apparatus // inferred from mutant phenotype /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048193 // Golgi vesicle transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from direct assay /// 0008047 // enzyme activator activity // inferred from direct assay /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 29.78 </td> <td> 194.39 </td> <td> 1.92 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 215127_s_at </td> <td> 215127_s_at </td> <td> AL517946 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL517946 /FEA=EST /DB_XREF=gi:12781439 /DB_XREF=est:AL517946 /CLONE=CS0DA004YB11 (3 prime) /UG=Hs.241567 RNA binding motif, single stranded interacting protein 1 </td> <td> AL517946 </td> <td> RNA binding motif, single stranded interacting protein 1 </td> <td> RBMS1 </td> <td> 5937 </td> <td> NM_002897 /// NM_016836 /// NM_016839 /// XM_005246737 /// XM_005246738 /// XM_005246739 /// XM_005246740 /// XM_005246741 /// XM_006712671 /// XM_006712672 /// XM_006712673 /// XM_006712674 /// XM_006712675 </td> <td> 0006260 // DNA replication // non-traceable author statement /// 0006396 // RNA processing // traceable author statement </td> <td> 0005634 // nucleus // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // non-traceable author statement /// 0003697 // single-stranded DNA binding // non-traceable author statement /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 78.20 </td> <td> 336.82 </td> <td> 1.92 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212761_at </td> <td> 212761_at </td> <td> AI949687 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI949687 /FEA=EST /DB_XREF=gi:5741997 /DB_XREF=est:wq13g04.x1 /CLONE=IMAGE:2471190 /UG=Hs.173638 transcription factor 7-like 2 (T-cell specific, HMG-box) </td> <td> AI949687 </td> <td> transcription factor 7-like 2 (T-cell specific, HMG-box) </td> <td> TCF7L2 </td> <td> 6934 </td> <td> NM_001146274 /// NM_001146283 /// NM_001146284 /// NM_001146285 /// NM_001146286 /// NM_001198525 /// NM_001198526 /// NM_001198527 /// NM_001198528 /// NM_001198529 /// NM_001198530 /// NM_001198531 /// NM_030756 /// XM_005270071 /// XM_005270073 /// XM_005270074 /// XM_005270075 /// XM_005270076 /// XM_005270077 /// XM_005270078 /// XM_005270079 /// XM_005270080 /// XM_005270082 /// XM_005270083 /// XM_005270084 /// XM_005270085 /// XM_005270086 /// XM_005270088 /// XM_005270089 /// XM_005270091 /// XM_005270092 /// XM_005270093 /// XM_005270094 /// XM_005270095 /// XM_005270096 /// XM_005270097 /// XM_005270098 /// XM_005270099 /// XM_005270100 /// XM_005270101 /// XM_005270102 /// XM_005270103 /// XM_005270104 /// XM_005270105 /// XM_006717955 /// XM_006717956 /// XM_006717957 /// XM_006717958 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001568 // blood vessel development // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007420 // brain development // not recorded /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0009749 // response to glucose // inferred from sequence or structural similarity /// 0010909 // positive regulation of heparan sulfate proteoglycan biosynthetic process // inferred from mutant phenotype /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030282 // bone mineralization // inferred from electronic annotation /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0030538 // embryonic genitalia morphogenesis // inferred from electronic annotation /// 0031016 // pancreas development // traceable author statement /// 0031641 // regulation of myelination // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from direct assay /// 0032024 // positive regulation of insulin secretion // inferred from mutant phenotype /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0032252 // secretory granule localization // inferred from electronic annotation /// 0032350 // regulation of hormone metabolic process // inferred from direct assay /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035411 // catenin import into nucleus // inferred from electronic annotation /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043570 // maintenance of DNA repeat elements // inferred from mutant phenotype /// 0043588 // skin development // inferred from electronic annotation /// 0044334 // canonical Wnt signaling pathway involved in positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0045444 // fat cell differentiation // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0046827 // positive regulation of protein export from nucleus // inferred from mutant phenotype /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048619 // embryonic hindgut morphogenesis // inferred from electronic annotation /// 0048625 // myoblast fate commitment // inferred from direct assay /// 0048641 // regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0048660 // regulation of smooth muscle cell proliferation // inferred from mutant phenotype /// 0048699 // generation of neurons // not recorded /// 0048713 // regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from mutant phenotype /// 0060070 // canonical Wnt signaling pathway // inferred by curator /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0061178 // regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 2000675 // negative regulation of type B pancreatic cell apoptotic process // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0032993 // protein-DNA complex // inferred from direct assay /// 0070369 // beta-catenin-TCF7L2 complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0035257 // nuclear hormone receptor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from mutant phenotype /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0045295 // gamma-catenin binding // inferred from physical interaction /// 0070016 // armadillo repeat domain binding // inferred from physical interaction </td> <td> -26.28 </td> <td> 189.51 </td> <td> -1.92 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212279_at </td> <td> 212279_at </td> <td> BE779865 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE779865 /FEA=EST /DB_XREF=gi:10201075 /DB_XREF=est:601465390F1 /CLONE=IMAGE:3868390 /UG=Hs.199695 hypothetical protein </td> <td> BE779865 </td> <td> transmembrane protein 97 </td> <td> TMEM97 </td> <td> 27346 </td> <td> NM_014573 /// XM_005257965 </td> <td> 0001558 // regulation of cell growth // non-traceable author statement /// 0042632 // cholesterol homeostasis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 43.50 </td> <td> 182.25 </td> <td> 1.92 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 217770_at </td> <td> 217770_at </td> <td> NM_015937 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015937.1 /DEF=Homo sapiens CGI-06 protein (LOC51604), mRNA. /FEA=mRNA /GEN=LOC51604 /PROD=CGI-06 protein /DB_XREF=gi:7706257 /UG=Hs.84038 CGI-06 protein /FL=gb:AF132940.1 gb:NM_015937.1 </td> <td> NM_015937 </td> <td> phosphatidylinositol glycan anchor biosynthesis, class T </td> <td> PIGT </td> <td> 51604 </td> <td> NM_001184728 /// NM_001184729 /// NM_001184730 /// NM_015937 /// NR_047691 /// NR_047692 /// NR_047693 /// NR_047694 /// NR_047695 /// XM_005260430 /// XM_005260432 </td> <td> 0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0016255 // attachment of GPI anchor to protein // traceable author statement /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // non-traceable author statement /// 0042765 // GPI-anchor transamidase complex // traceable author statement </td> <td> 0003923 // GPI-anchor transamidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -31.57 </td> <td> 169.04 </td> <td> -1.92 </td> <td> 0.09 </td> <td> 0.14 </td> <td> -4.55 </td> </tr>
  <tr> <td> 35265_at </td> <td> 35265_at </td> <td> AF044263 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. U31501:Human fragile X mental retardation syndrome related protein (FXR2) mRNA, complete cds /cds=(227,2248) /gb=U31501 /gi=1098636 /ug=Hs.52788 /len=2849 </td> <td> AF044263 </td> <td> fragile X mental retardation, autosomal homolog 2 </td> <td> FXR2 </td> <td> 9513 </td> <td> NM_004860 /// XR_243572 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 24.82 </td> <td> 103.69 </td> <td> 1.91 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 219664_s_at </td> <td> 219664_s_at </td> <td> NM_020664 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020664.1 /DEF=Homo sapiens 2,4-dienoyl CoA reductase 2, peroxisomal (DECR2), mRNA.  /FEA=mRNA /GEN=DECR2 /PROD=peroxisomal 2,4-dienoyl-CoA reductase /DB_XREF=gi:10190703 /UG=Hs.15898 2,4-dienoyl CoA reductase 2, peroxisomal /FL=gb:NM_020664.1 </td> <td> NM_020664 </td> <td> 2,4-dienoyl CoA reductase 2, peroxisomal </td> <td> DECR2 </td> <td> 26063 </td> <td> NM_020664 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006636 // unsaturated fatty acid biosynthetic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from electronic annotation </td> <td> 0005102 // receptor binding // inferred from physical interaction /// 0008670 // 2,4-dienoyl-CoA reductase (NADPH) activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019166 // trans-2-enoyl-CoA reductase (NADPH) activity // inferred from direct assay </td> <td> 39.27 </td> <td> 65.19 </td> <td> 1.91 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 213153_at </td> <td> 213153_at </td> <td> AB028999 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB028999.1 /DEF=Homo sapiens mRNA for KIAA1076 protein, partial cds. /FEA=mRNA /GEN=KIAA1076 /PROD=KIAA1076 protein /DB_XREF=gi:5689488 /UG=Hs.154525 KIAA1076 protein </td> <td> AB028999 </td> <td> SET domain containing 1B </td> <td> SETD1B </td> <td> 23067 </td> <td> NM_015048 /// XM_005253858 /// XM_006719295 /// XM_006719296 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0048188 // Set1C/COMPASS complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay </td> <td> -56.40 </td> <td> 190.30 </td> <td> -1.91 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 217393_x_at </td> <td> 217393_x_at </td> <td> AL109622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL109622 /DEF=Human DNA sequence from clone RP3-526F5 on chromosome Xq26.3-28. Contains the gene for a novel protein similar to UBE2N (ubiquitin-conjugating enzyme E2N (homologous to yeast UBC13)), ESTs, STSs and GSSs /FEA=mRNA /DB_XREF=gi:6002166 /UG=Hs.272352 Human DNA sequence from clone RP3-526F5 on chromosome Xq26.3-28. Contains the gene for a novel protein similar to UBE2N (ubiquitin-conjugating enzyme E2N (homologous to yeast UBC13)), ESTs, STSs and GSSs </td> <td> AL109622 </td> <td> ubiquitin-conjugating enzyme E2N-like </td> <td> UBE2NL </td> <td> 389898 </td> <td> NM_001012989 /// NR_121210 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td>  </td> <td> 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> 44.70 </td> <td> 209.90 </td> <td> 1.91 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200029_at </td> <td> 200029_at </td> <td> NM_000981 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000981.1 /DEF=Homo sapiens ribosomal protein L19 (RPL19), mRNA. /FEA=mRNA /GEN=RPL19 /PROD=ribosomal protein L19 /DB_XREF=gi:4506608 /UG=Hs.252723 ribosomal protein L19 /FL=gb:BC000530.1 gb:NM_000981.1 </td> <td> NM_000981 </td> <td> ribosomal protein L19 </td> <td> RPL19 </td> <td> 6143 </td> <td> NM_000981 /// XM_005257564 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -370.88 </td> <td> 2799.16 </td> <td> -1.91 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212111_at </td> <td> 212111_at </td> <td> AA628051 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA628051 /FEA=EST /DB_XREF=gi:2540050 /DB_XREF=est:ns67a01.s1 /CLONE=IMAGE:1188648 /UG=Hs.106823 H.sapiens gene from PAC 426I6, similar to syntaxin 7 </td> <td> AA628051 </td> <td> syntaxin 12 </td> <td> STX12 </td> <td> 23673 </td> <td> NM_177424 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // not recorded /// 0015031 // protein transport // inferred from electronic annotation /// 0016079 // synaptic vesicle exocytosis // not recorded /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0033344 // cholesterol efflux // inferred from direct assay /// 0050821 // protein stabilization // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031083 // BLOC-1 complex // inferred from direct assay /// 0031201 // SNARE complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000149 // SNARE binding // not recorded /// 0005484 // SNAP receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction </td> <td> 41.83 </td> <td> 117.19 </td> <td> 1.91 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212661_x_at </td> <td> 212661_x_at </td> <td> BE731738 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE731738 /FEA=EST /DB_XREF=gi:10145730 /DB_XREF=est:601568154F1 /CLONE=IMAGE:3842844 /UG=Hs.182937 peptidylprolyl isomerase A (cyclophilin A) </td> <td> BE731738 </td> <td> peptidyl-prolyl cis-trans isomerase A-like /// peptidylprolyl isomerase A (cyclophilin A) </td> <td> LOC101060363 /// PPIA </td> <td> 5478 /// 101060363 </td> <td> NM_021130 /// NM_203430 /// NM_203431 /// XM_003960117 /// XM_005246048 /// XM_005249791 /// XM_005275876 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0002576 // platelet degranulation // traceable author statement /// 0006278 // RNA-dependent DNA replication // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019061 // uncoating of virus // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019076 // viral release from host cell // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030260 // entry into host cell // traceable author statement /// 0034389 // lipid particle organization // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // traceable author statement /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0075713 // establishment of integrated proviral latency // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046790 // virion binding // non-traceable author statement /// 0051082 // unfolded protein binding // traceable author statement </td> <td> -956.57 </td> <td> 4911.14 </td> <td> -1.91 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 202406_s_at </td> <td> 202406_s_at </td> <td> NM_003252 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003252.2 /DEF=Homo sapiens TIA1 cytotoxic granule-associated RNA-binding protein-like 1 (TIAL1), transcript variant 1, mRNA.  /FEA=mRNA /GEN=TIAL1 /PROD=TIA1 cytotoxic granule-associated RNA-bindingprotein-like 1, isoform 1 /DB_XREF=gi:13435392 /UG=Hs.182741 TIA1 cytotoxic granule-associated RNA-binding protein-like 1 /FL=gb:NM_003252.2 gb:M96954.1 </td> <td> NM_003252 </td> <td> TIA1 cytotoxic granule-associated RNA binding protein-like 1 </td> <td> TIAL1 </td> <td> 7073 </td> <td> NM_001033925 /// NM_003252 /// XM_005270108 /// XM_005270109 /// XM_005270110 /// XM_006717959 /// XR_428715 </td> <td> 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0007281 // germ cell development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0017145 // stem cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005764 // lysosome // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0017091 // AU-rich element binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -39.78 </td> <td> 272.96 </td> <td> -1.91 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 213727_x_at </td> <td> 213727_x_at </td> <td> AI743654 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI743654 /FEA=EST /DB_XREF=gi:5111942 /DB_XREF=est:wg41d01.x1 /CLONE=IMAGE:2367649 /UG=Hs.154145 hypothetical protein FLJ11585 </td> <td> AI743654 </td> <td> metallophosphoesterase 1 </td> <td> MPPE1 </td> <td> 65258 </td> <td> NM_001242904 /// NM_023075 /// NM_138608 /// NR_040241 /// NR_040242 /// NR_040243 /// XM_006722340 /// XM_006722341 /// XM_006722342 /// XM_006722343 /// XM_006722344 /// XM_006722345 /// XM_006722346 /// XM_006722347 /// XM_006722348 /// XM_006722349 </td> <td> 0006506 // GPI anchor biosynthetic process // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0070971 // endoplasmic reticulum exit site // inferred from sequence or structural similarity </td> <td> 0008081 // phosphoric diester hydrolase activity // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from sequence or structural similarity /// 0034235 // GPI anchor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 27.70 </td> <td> 35.65 </td> <td> 1.91 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 207334_s_at </td> <td> 207334_s_at </td> <td> NM_003242 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003242.1 /DEF=Homo sapiens transforming growth factor, beta receptor II (70-80kD) (TGFBR2), mRNA.  /FEA=mRNA /GEN=TGFBR2 /PROD=transforming growth factor, beta receptor II(70-80kD) /DB_XREF=gi:4507468 /UG=Hs.82028 transforming growth factor, beta receptor II (70-80kD) /FL=gb:M85079.1 gb:NM_003242.1 </td> <td> NM_003242 </td> <td> transforming growth factor, beta receptor II (70/80kDa) </td> <td> TGFBR2 </td> <td> 7048 </td> <td> NM_001024847 /// NM_003242 /// XM_006713316 </td> <td> 0001568 // blood vessel development // traceable author statement /// 0001569 // patterning of blood vessels // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0002088 // lens development in camera-type eye // inferred from electronic annotation /// 0002651 // positive regulation of tolerance induction to self antigen // inferred from sequence or structural similarity /// 0002663 // positive regulation of B cell tolerance induction // inferred from sequence or structural similarity /// 0002666 // positive regulation of T cell tolerance induction // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred by curator /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007182 // common-partner SMAD protein phosphorylation // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010634 // positive regulation of epithelial cell migration // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from sequence or structural similarity /// 0032924 // activin receptor signaling pathway // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from sequence or structural similarity /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from sequence or structural similarity /// 0042493 // response to drug // inferred from direct assay /// 0043011 // myeloid dendritic cell differentiation // inferred from sequence or structural similarity /// 0043415 // positive regulation of skeletal muscle tissue regeneration // inferred from electronic annotation /// 0043627 // response to estrogen // inferred from electronic annotation /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from sequence or structural similarity /// 0051138 // positive regulation of NK T cell differentiation // inferred from sequence or structural similarity /// 0051216 // cartilage development // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060425 // lung morphogenesis // inferred from electronic annotation /// 0060433 // bronchus development // inferred from electronic annotation /// 0060434 // bronchus morphogenesis // inferred from electronic annotation /// 0060439 // trachea morphogenesis // inferred from electronic annotation /// 0060440 // trachea formation // inferred from electronic annotation /// 0060443 // mammary gland morphogenesis // inferred from electronic annotation /// 0060463 // lung lobe morphogenesis // inferred from electronic annotation /// 0070723 // response to cholesterol // inferred from direct assay /// 1990086 // lens fiber cell apoptotic process // inferred from electronic annotation /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0070022 // transforming growth factor beta receptor homodimeric complex // inferred by curator </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred by curator /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from direct assay /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from mutant phenotype /// 0005026 // transforming growth factor beta receptor activity, type II // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017002 // activin-activated receptor activity // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation /// 0034713 // type I transforming growth factor beta receptor binding // inferred from direct assay /// 0034713 // type I transforming growth factor beta receptor binding // inferred from physical interaction /// 0034714 // type III transforming growth factor beta receptor binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050431 // transforming growth factor beta binding // inferred from direct assay /// 0050431 // transforming growth factor beta binding // inferred from physical interaction </td> <td> -48.08 </td> <td> 101.01 </td> <td> -1.91 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 213083_at </td> <td> 213083_at </td> <td> AJ005866 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AJ005866.1 /DEF=Homo sapiens mRNA for putative Sqv-7-like protein, partial. /FEA=mRNA /PROD=Sqv-7-like protein /DB_XREF=gi:4008516 /UG=Hs.90078 nucleotide-sugar transporter similar to C. elegans sqv-7 </td> <td> AJ005866 </td> <td> solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2 </td> <td> SLC35D2 </td> <td> 11046 </td> <td> NM_001286990 /// NM_007001 /// NR_104627 /// XM_005251673 /// XM_005251674 /// XM_005251675 /// XM_005251676 /// XM_005251678 /// XM_006716939 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0018146 // keratan sulfate biosynthetic process // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0042339 // keratan sulfate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 1901264 // carbohydrate derivative transport // non-traceable author statement /// 1901679 // nucleotide transmembrane transport // non-traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005338 // nucleotide-sugar transmembrane transporter activity // non-traceable author statement </td> <td> 29.70 </td> <td> 100.03 </td> <td> 1.90 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201887_at </td> <td> 201887_at </td> <td> NM_001560 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001560.1 /DEF=Homo sapiens interleukin 13 receptor, alpha 1 (IL13RA1), mRNA. /FEA=mRNA /GEN=IL13RA1 /PROD=interleukin 13 receptor, alpha 1 /DB_XREF=gi:4504646 /UG=Hs.285115 interleukin 13 receptor, alpha 1 /FL=gb:NM_001560.1 gb:U81379.3 </td> <td> NM_001560 </td> <td> interleukin 13 receptor, alpha 1 </td> <td> IL13RA1 </td> <td> 3597 </td> <td> NM_001560 /// XM_005262411 </td> <td> 0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0035772 // interleukin-13-mediated signaling pathway // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005898 // interleukin-13 receptor complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016515 // interleukin-13 receptor activity // inferred from electronic annotation </td> <td> -41.42 </td> <td> 303.46 </td> <td> -1.90 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200624_s_at </td> <td> 200624_s_at </td> <td> AA577695 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA577695 /FEA=EST /DB_XREF=gi:2355879 /DB_XREF=est:nn22h02.s1 /CLONE=IMAGE:1084659 /UG=Hs.78825 matrin 3 /FL=gb:NM_018834.1 gb:AB018266.1 </td> <td> AA577695 </td> <td> matrin 3 /// small nucleolar RNA host gene 4 (non-protein coding) </td> <td> MATR3 /// SNHG4 </td> <td> 9782 /// 724102 </td> <td> NM_001194954 /// NM_001194955 /// NM_001194956 /// NM_001282278 /// NM_018834 /// NM_199189 /// NR_003141 /// NR_036536 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005637 // nuclear inner membrane // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 83.50 </td> <td> 514.77 </td> <td> 1.90 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 209524_at </td> <td> 209524_at </td> <td> AK001280 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001280.1 /DEF=Homo sapiens cDNA FLJ10418 fis, clone NT2RP1000130, moderately similar to HEPATOMA-DERIVED GROWTH FACTOR.  /FEA=mRNA /DB_XREF=gi:7022435 /UG=Hs.127842 CGI-142 /FL=gb:AF151900.1 gb:AB029156.1 gb:NM_016073.1 </td> <td> AK001280 </td> <td> hepatoma-derived growth factor, related protein 3 </td> <td> HDGFRP3 </td> <td> 50810 </td> <td> NM_016073 /// XM_006720554 </td> <td> 0008283 // cell proliferation // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0008083 // growth factor activity // inferred from electronic annotation </td> <td> -62.85 </td> <td> 407.50 </td> <td> -1.90 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 211257_x_at </td> <td> 211257_x_at </td> <td> AF273049 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF273049.1 /DEF=Homo sapiens CTCL tumor antigen se33-1 mRNA, complete cds. /FEA=mRNA /PROD=CTCL tumor antigen se33-1 /DB_XREF=gi:11385655 /UG=Hs.169984 nuclear protein /FL=gb:AF273049.1 </td> <td> AF273049 </td> <td> zinc finger protein 638 </td> <td> ZNF638 </td> <td> 27332 </td> <td> NM_001014972 /// NM_001252612 /// NM_001252613 /// NM_014497 /// XM_005264261 /// XM_005264262 /// XM_005264263 /// XM_005264264 /// XM_006711989 /// XM_006711990 /// XR_244928 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -67.77 </td> <td> 251.66 </td> <td> -1.90 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201731_s_at </td> <td> 201731_s_at </td> <td> NM_003292 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003292.1 /DEF=Homo sapiens translocated promoter region (to activated MET oncogene) (TPR), mRNA.  /FEA=mRNA /GEN=TPR /PROD=translocated promoter region (to activated METoncogene) /DB_XREF=gi:4507658 /UG=Hs.169750 translocated promoter region (to activated MET oncogene) /FL=gb:NM_003292.1 </td> <td> NM_003292 </td> <td> translocated promoter region, nuclear basket protein </td> <td> TPR </td> <td> 7175 </td> <td> NM_003292 /// XM_005245471 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000189 // MAPK import into nucleus // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0000738 // DNA catabolic process, exonucleolytic // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006308 // DNA catabolic process // inferred from electronic annotation /// 0006404 // RNA import into nucleus // inferred from direct assay /// 0006405 // RNA export from nucleus // inferred from mutant phenotype /// 0006434 // seryl-tRNA aminoacylation // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006606 // protein import into nucleus // inferred from mutant phenotype /// 0006611 // protein export from nucleus // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006999 // nuclear pore organization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0007094 // mitotic spindle assembly checkpoint // inferred from mutant phenotype /// 0008645 // hexose transport // traceable author statement /// 0010793 // regulation of mRNA export from nucleus // inferred from mutant phenotype /// 0010827 // regulation of glucose transport // traceable author statement /// 0010965 // regulation of mitotic sister chromatid separation // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031453 // positive regulation of heterochromatin assembly // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0031990 // mRNA export from nucleus in response to heat stress // inferred from direct assay /// 0034605 // cellular response to heat // inferred from direct assay /// 0035457 // cellular response to interferon-alpha // inferred from sequence or structural similarity /// 0042306 // regulation of protein import into nucleus // inferred from mutant phenotype /// 0042307 // positive regulation of protein import into nucleus // inferred from mutant phenotype /// 0043578 // nuclear matrix organization // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0045947 // negative regulation of translational initiation // inferred from mutant phenotype /// 0046825 // regulation of protein export from nucleus // inferred from mutant phenotype /// 0046827 // positive regulation of protein export from nucleus // inferred from sequence or structural similarity /// 0046832 // negative regulation of RNA export from nucleus // inferred from direct assay /// 0046832 // negative regulation of RNA export from nucleus // inferred from mutant phenotype /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051292 // nuclear pore complex assembly // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0070849 // response to epidermal growth factor // inferred from direct assay /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from mutant phenotype /// 0090316 // positive regulation of intracellular protein transport // inferred from mutant phenotype /// 1901673 // regulation of spindle assembly involved in mitosis // inferred from mutant phenotype </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005643 // nuclear pore // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from direct assay /// 0009318 // exodeoxyribonuclease VII complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0034399 // nuclear periphery // inferred from direct assay /// 0042405 // nuclear inclusion body // inferred from direct assay /// 0044615 // nuclear pore nuclear basket // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003729 // mRNA binding // inferred from direct assay /// 0004828 // serine-tRNA ligase activity // inferred from electronic annotation /// 0005215 // transporter activity // inferred from mutant phenotype /// 0005487 // nucleocytoplasmic transporter activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008855 // exodeoxyribonuclease VII activity // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from direct assay /// 0031072 // heat shock protein binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043495 // protein anchor // inferred from mutant phenotype /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051019 // mitogen-activated protein kinase binding // inferred from direct assay /// 0070840 // dynein complex binding // inferred from direct assay </td> <td> -58.90 </td> <td> 412.05 </td> <td> -1.90 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 222201_s_at </td> <td> 222201_s_at </td> <td> AB037736 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB037736.1 /DEF=Homo sapiens mRNA for KIAA1315 protein, partial cds. /FEA=mRNA /GEN=KIAA1315 /PROD=KIAA1315 protein /DB_XREF=gi:7243010 /UG=Hs.122843 CASP8 associated protein 2 </td> <td> AB037736 </td> <td> caspase 8 associated protein 2 </td> <td> CASP8AP2 </td> <td> 9994 </td> <td> NM_001137667 /// NM_001137668 /// NM_012115 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from sequence or structural similarity /// 0036337 // Fas signaling pathway // inferred from mutant phenotype /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0016605 // PML body // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005123 // death receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from sequence or structural similarity /// 0016505 // peptidase activator activity involved in apoptotic process // inferred from sequence or structural similarity /// 0032184 // SUMO polymer binding // inferred from direct assay </td> <td> 32.70 </td> <td> 93.85 </td> <td> 1.90 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 204117_at </td> <td> 204117_at </td> <td> NM_002726 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002726.1 /DEF=Homo sapiens prolyl endopeptidase (PREP), mRNA. /FEA=mRNA /GEN=PREP /PROD=prolyl endopeptidase /DB_XREF=gi:4506042 /UG=Hs.86978 prolyl endopeptidase /FL=gb:AB028867.1 gb:NM_002726.1 gb:AB020018.1 gb:D21102.1 </td> <td> NM_002726 </td> <td> prolyl endopeptidase </td> <td> PREP </td> <td> 5550 </td> <td> NM_002726 /// XM_005267044 </td> <td> 0006508 // proteolysis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0070008 // serine-type exopeptidase activity // inferred from electronic annotation </td> <td> 31.65 </td> <td> 127.28 </td> <td> 1.90 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 202788_at </td> <td> 202788_at </td> <td> NM_004635 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004635.1 /DEF=Homo sapiens mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA.  /FEA=mRNA /GEN=MAPKAPK3 /PROD=mitogen-activated protein kinase-activatedprotein kinase 3 /DB_XREF=gi:4758699 /UG=Hs.227789 mitogen-activated protein kinase-activated protein kinase 3 /FL=gb:U09578.1 gb:U43784.1 gb:BC001662.1 gb:NM_004635.1 </td> <td> NM_004635 </td> <td> mitogen-activated protein kinase-activated protein kinase 3 </td> <td> MAPKAPK3 </td> <td> 7867 </td> <td> NM_001243925 /// NM_001243926 /// NM_004635 </td> <td> 0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0034097 // response to cytokine // inferred from direct assay /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0044351 // macropinocytosis // inferred from sequence or structural similarity /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004708 // MAP kinase kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation </td> <td> 32.12 </td> <td> 59.99 </td> <td> 1.90 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200008_s_at </td> <td> 200008_s_at </td> <td> D13988 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D13988.1 /DEF=Human rab GDI mRNA, complete cds. /FEA=mRNA /PROD=human rab GDI /DB_XREF=gi:285974 /UG=Hs.56845 GDP dissociation inhibitor 2 /FL=gb:BC005145.1 gb:D13988.1 gb:NM_001494.2 </td> <td> D13988 </td> <td> GDP dissociation inhibitor 2 </td> <td> GDI2 </td> <td> 2665 </td> <td> NM_001115156 /// NM_001494 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005093 // Rab GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -122.75 </td> <td> 622.70 </td> <td> -1.90 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212720_at </td> <td> 212720_at </td> <td> AI670847 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI670847 /FEA=EST /DB_XREF=gi:4850578 /DB_XREF=est:wa04h10.x1 /CLONE=IMAGE:2297155 /UG=Hs.5324 hypothetical protein </td> <td> AI670847 </td> <td> poly(A) polymerase alpha </td> <td> PAPOLA </td> <td> 10914 </td> <td> NM_001252006 /// NM_001252007 /// NM_001293627 /// NM_001293628 /// NM_001293632 /// NM_032632 /// XM_005267280 /// XM_005267281 /// XM_005267282 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // non-traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031123 // RNA 3'-end processing // inferred from electronic annotation /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0043631 // RNA polyadenylation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation /// 0004652 // polynucleotide adenylyltransferase activity // not recorded /// 0004652 // polynucleotide adenylyltransferase activity // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -37.48 </td> <td> 115.76 </td> <td> -1.90 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212270_x_at </td> <td> 212270_x_at </td> <td> BG168283 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG168283 /FEA=EST /DB_XREF=gi:12674986 /DB_XREF=est:602340822F1 /CLONE=IMAGE:4448789 /UG=Hs.82202 ribosomal protein L17 </td> <td> BG168283 </td> <td> chromosome 18 open reading frame 32 /// ribosomal protein L17 /// RPL17-C18orf32 readthrough /// small nucleolar RNA, C/D box 58A /// small nucleolar RNA, C/D box 58B /// small nucleolar RNA, C/D box 58C </td> <td> C18orf32 /// RPL17 /// RPL17-C18orf32 /// SNORD58A /// SNORD58B /// SNORD58C </td> <td> 6139 /// 26790 /// 26791 /// 497661 /// 100124516 /// 100526842 </td> <td> NM_000985 /// NM_001035005 /// NM_001035006 /// NM_001199340 /// NM_001199341 /// NM_001199342 /// NM_001199343 /// NM_001199344 /// NM_001199345 /// NM_001199346 /// NM_001199355 /// NM_001199356 /// NR_002571 /// NR_002572 /// NR_003701 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015934 // large ribosomal subunit // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -505.53 </td> <td> 2851.24 </td> <td> -1.89 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 218198_at </td> <td> 218198_at </td> <td> NM_018180 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018180.1 /DEF=Homo sapiens hypothetical protein FLJ10889 (FLJ10889), mRNA. /FEA=mRNA /GEN=FLJ10889 /PROD=hypothetical protein FLJ10694 /DB_XREF=gi:9506626 /UG=Hs.171835 hypothetical protein FLJ10889 /FL=gb:BC002473.1 gb:NM_018180.1 </td> <td> NM_018180 </td> <td> DEAH (Asp-Glu-Ala-His) box polypeptide 32 </td> <td> DHX32 </td> <td> 55760 </td> <td> NM_018180 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -33.25 </td> <td> 168.85 </td> <td> -1.89 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 211061_s_at </td> <td> 211061_s_at </td> <td> BC006390 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006390.1 /DEF=Homo sapiens, mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, clone MGC:12650, mRNA, complete cds.  /FEA=mRNA /PROD=mannosyl (alpha-1,6-)-glycoproteinbeta-1,2-N-acetylglucosaminyltransferase /DB_XREF=gi:13623554 /FL=gb:BC006390.1 </td> <td> BC006390 </td> <td> mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase </td> <td> MGAT2 </td> <td> 4247 </td> <td> NM_001015883 /// NM_002408 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // traceable author statement /// 0009311 // oligosaccharide metabolic process // traceable author statement /// 0009312 // oligosaccharide biosynthetic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0008455 // alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> 42.60 </td> <td> 270.82 </td> <td> 1.89 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 220368_s_at </td> <td> 220368_s_at </td> <td> NM_017936 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017936.1 /DEF=Homo sapiens hypothetical protein FLJ20707 (FLJ20707), mRNA. /FEA=mRNA /GEN=FLJ20707 /PROD=hypothetical protein FLJ20707 /DB_XREF=gi:8923637 /UG=Hs.109441 hypothetical protein FLJ20707 /FL=gb:NM_017936.1 </td> <td> NM_017936 </td> <td> SMEK homolog 1, suppressor of mek1 (Dictyostelium) </td> <td> SMEK1 </td> <td> 55671 </td> <td> NM_001284280 /// NM_001284281 /// NM_017936 /// NM_032560 /// XM_005267842 /// XM_006720194 /// XR_245702 /// XR_245703 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0045722 // positive regulation of gluconeogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030289 // protein phosphatase 4 complex // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -26.92 </td> <td> 78.74 </td> <td> -1.89 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 216624_s_at </td> <td> 216624_s_at </td> <td> Z69744 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:Z69744 /DEF=H.sapiens ALL-1 gene exon 1 (and joined coding region) /FEA=CDS /DB_XREF=gi:1490270 /UG=Hs.199160 myeloidlymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog) </td> <td> Z69744 </td> <td> lysine (K)-specific methyltransferase 2A </td> <td> KMT2A </td> <td> 4297 </td> <td> NM_001197104 /// NM_005933 /// NM_024891 /// XM_006718839 /// XM_006718840 </td> <td> 0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // inferred from mutant phenotype /// 0035162 // embryonic hemopoiesis // traceable author statement /// 0043984 // histone H4-K16 acetylation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from mutant phenotype /// 0051569 // regulation of histone H3-K4 methylation // inferred from electronic annotation /// 0080182 // histone H3-K4 trimethylation // inferred from direct assay /// 2001040 // positive regulation of cellular response to drug // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003680 // AT DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from mutant phenotype /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0045322 // unmethylated CpG binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070577 // lysine-acetylated histone binding // inferred from direct assay </td> <td> -43.90 </td> <td> 56.65 </td> <td> -1.89 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 202552_s_at </td> <td> 202552_s_at </td> <td> NM_016441 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016441.1 /DEF=Homo sapiens cysteine-rich motor neuron 1 (CRIM1), mRNA. /FEA=mRNA /GEN=CRIM1 /PROD=cysteine-rich motor neuron 1 /DB_XREF=gi:10092638 /UG=Hs.19280 cysteine-rich motor neuron 1 /FL=gb:NM_016441.1 gb:AF167706.1 </td> <td> NM_016441 </td> <td> cysteine rich transmembrane BMP regulator 1 (chordin-like) /// uncharacterized LOC101929500 </td> <td> CRIM1 /// LOC101929500 </td> <td> 51232 /// 101929500 </td> <td> NM_016441 /// XM_005264357 /// XM_005264358 /// XR_244983 /// XR_249109 /// XR_251054 /// XR_426983 </td> <td> 0001558 // regulation of cell growth // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from direct assay </td> <td> -100.97 </td> <td> 624.66 </td> <td> -1.89 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200890_s_at </td> <td> 200890_s_at </td> <td> AW006345 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW006345 /FEA=EST /DB_XREF=gi:5855123 /DB_XREF=est:wt04d05.x1 /CLONE=IMAGE:2506473 /UG=Hs.250773 signal sequence receptor, alpha (translocon-associated protein alpha) /FL=gb:AF156965.1 gb:NM_003144.2 </td> <td> AW006345 </td> <td> signal sequence receptor, alpha </td> <td> SSR1 </td> <td> 6745 </td> <td> NM_001292008 /// NM_003144 /// NR_120448 </td> <td> 0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 37.05 </td> <td> 129.57 </td> <td> 1.89 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 221002_s_at </td> <td> 221002_s_at </td> <td> NM_030927 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030927.1 /DEF=Homo sapiens hypothetical protein MGC11352 (MGC11352), mRNA. /FEA=mRNA /GEN=MGC11352 /PROD=hypothetical protein  MGC11352 /DB_XREF=gi:13569888 /FL=gb:NM_030927.1 </td> <td> NM_030927 </td> <td> tetraspanin 14 </td> <td> TSPAN14 </td> <td> 81619 </td> <td> NM_001128309 /// NM_030927 /// XM_005270191 /// XM_005270192 /// XM_006717990 /// XM_006717991 /// XM_006717992 </td> <td> 0045747 // positive regulation of Notch signaling pathway // inferred from mutant phenotype /// 0051604 // protein maturation // inferred from mutant phenotype /// 0090002 // establishment of protein localization to plasma membrane // inferred from mutant phenotype </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0019899 // enzyme binding // inferred from physical interaction </td> <td> 77.15 </td> <td> 367.05 </td> <td> 1.89 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 203353_s_at </td> <td> 203353_s_at </td> <td> NM_015846 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015846.1 /DEF=Homo sapiens methyl-CpG binding domain protein 1 (MBD1), transcript variant 1, mRNA.  /FEA=mRNA /GEN=MBD1 /PROD=methyl-CpG binding domain protein 1, isoform 1 /DB_XREF=gi:7710138 /UG=Hs.6211 methyl-CpG binding domain protein 1 /FL=gb:AF078830.1 gb:NM_015846.1 </td> <td> NM_015846 </td> <td> methyl-CpG binding domain protein 1 </td> <td> MBD1 </td> <td> 4152 </td> <td> NM_001204136 /// NM_001204137 /// NM_001204138 /// NM_001204139 /// NM_001204140 /// NM_001204141 /// NM_001204142 /// NM_001204143 /// NM_001204151 /// NM_002384 /// NM_015844 /// NM_015845 /// NM_015846 /// NM_015847 /// XM_005258262 /// XM_005258264 /// XM_005258265 /// XM_005258268 /// XM_005258271 /// XM_005258272 /// XM_005258274 /// XM_006722452 /// XM_006722453 /// XM_006722454 /// XM_006722455 /// XM_006722456 /// XM_006722457 /// XM_006722458 /// XM_006722459 /// XM_006722460 /// XM_006722461 /// XM_006722462 /// XM_006722463 /// XM_006722464 /// XM_006722465 /// XM_006722466 /// XM_006722467 /// XM_006722468 /// XM_006722469 /// XM_006722470 /// XM_006722471 /// XM_006722472 /// XM_006722473 /// XM_006722474 /// XM_006722475 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from sequence or structural similarity /// 0016607 // nuclear speck // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008327 // methyl-CpG binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 32.20 </td> <td> 190.90 </td> <td> 1.89 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200913_at </td> <td> 200913_at </td> <td> NM_002707 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002707.1 /DEF=Homo sapiens protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform (PPM1G), mRNA.  /FEA=mRNA /GEN=PPM1G /PROD=protein phosphatase 1G (formerly 2C),magnesium-dependent, gamma isoform /DB_XREF=gi:4505998 /UG=Hs.17883 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform /FL=gb:BC000057.1 gb:NM_002707.1 </td> <td> NM_002707 </td> <td> protein phosphatase, Mg2+/Mn2+ dependent, 1G </td> <td> PPM1G </td> <td> 5496 </td> <td> NM_177983 </td> <td> 0006470 // protein dephosphorylation // traceable author statement /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0035970 // peptidyl-threonine dephosphorylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -23.30 </td> <td> 141.57 </td> <td> -1.89 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 210183_x_at </td> <td> 210183_x_at </td> <td> AF112222 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF112222.1 /DEF=Homo sapiens nuclear protein SDK3 mRNA, complete cds. /FEA=mRNA /PROD=nuclear protein SDK3 /DB_XREF=gi:6563229 /UG=Hs.44499 pinin, desmosome associated protein /FL=gb:AF112222.1 </td> <td> AF112222 </td> <td> pinin, desmosome associated protein </td> <td> PNN </td> <td> 5411 </td> <td> NM_002687 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005198 // structural molecule activity // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -251.63 </td> <td> 1302.34 </td> <td> -1.89 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 221918_at </td> <td> 221918_at </td> <td> AI742210 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI742210 /FEA=EST /DB_XREF=gi:5110498 /DB_XREF=est:wg39c02.x1 /CLONE=IMAGE:2367458 /UG=Hs.183302 ESTs </td> <td> AI742210 </td> <td> cyclin-dependent kinase 17 </td> <td> CDK17 </td> <td> 5128 </td> <td> NM_001170464 /// NM_002595 /// XM_006719444 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td>  </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 129.00 </td> <td> 656.98 </td> <td> 1.88 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201805_at </td> <td> 201805_at </td> <td> NM_002733 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002733.1 /DEF=Homo sapiens protein kinase, AMP-activated, gamma 1 non-catalytic subunit (PRKAG1), mRNA.  /FEA=mRNA /GEN=PRKAG1 /PROD=protein kinase, AMP-activated, gamma 1non-catalytic subunit /DB_XREF=gi:4506060 /UG=Hs.3136 protein kinase, AMP-activated, gamma 1 non-catalytic subunit /FL=gb:BC000358.1 gb:U42412.1 gb:NM_002733.1 </td> <td> NM_002733 </td> <td> protein kinase, AMP-activated, gamma 1 non-catalytic subunit </td> <td> PRKAG1 </td> <td> 5571 </td> <td> NM_001206709 /// NM_001206710 /// NM_002733 /// NM_212461 /// XM_005269019 /// XM_005269020 /// XM_006719499 /// XM_006719500 </td> <td> 0006110 // regulation of glycolytic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0031588 // AMP-activated protein kinase complex // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004679 // AMP-activated protein kinase activity // inferred from sequence or structural similarity /// 0004691 // cAMP-dependent protein kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0008603 // cAMP-dependent protein kinase regulator activity // traceable author statement /// 0016208 // AMP binding // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from direct assay /// 0030554 // adenyl nucleotide binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity </td> <td> -37.90 </td> <td> 186.10 </td> <td> -1.88 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 215832_x_at </td> <td> 215832_x_at </td> <td> AV722190 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV722190 /FEA=EST /DB_XREF=gi:10824430 /DB_XREF=est:AV722190 /CLONE=HTBAMF09 /UG=Hs.7885 phosphatidylinositol binding clathrin assembly protein </td> <td> AV722190 </td> <td> phosphatidylinositol binding clathrin assembly protein </td> <td> PICALM </td> <td> 8301 </td> <td> NM_001008660 /// NM_001206946 /// NM_001206947 /// NM_007166 /// XM_005274322 /// XM_005274323 /// XM_005274324 /// XM_005274325 /// XM_005274326 /// XM_005274327 /// XM_005274328 /// XM_005274329 /// XM_005274330 /// XM_005274331 /// XM_005274332 /// XM_005274333 /// XM_005274334 /// XM_005274335 /// XM_005274336 /// XM_005274337 /// XM_005274338 /// XM_005274340 /// XM_006718699 /// XM_006718700 /// XM_006718701 /// XM_006718702 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from mutant phenotype /// 0016188 // synaptic vesicle maturation // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from mutant phenotype /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0032880 // regulation of protein localization // inferred from direct assay /// 0035459 // cargo loading into vesicle // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0048261 // negative regulation of receptor-mediated endocytosis // inferred from direct assay /// 0048268 // clathrin coat assembly // inferred from mutant phenotype /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from mutant phenotype /// 0072583 // clathrin-mediated endocytosis // inferred from mutant phenotype /// 0097459 // iron ion import into cell // inferred from mutant phenotype /// 1901216 // positive regulation of neuron death // inferred from mutant phenotype /// 1902004 // positive regulation of beta-amyloid formation // inferred from mutant phenotype /// 1902959 // regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process // inferred from mutant phenotype /// 1902961 // positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process // inferred from sequence or structural similarity /// 1902963 // negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // inferred from direct assay /// 0030132 // clathrin coat of coated pit // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from sequence or structural similarity /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0097418 // neurofibrillary tangle // inferred from mutant phenotype </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from sequence or structural similarity /// 0030276 // clathrin binding // inferred from direct assay /// 0030276 // clathrin binding // inferred from physical interaction /// 0030276 // clathrin binding // inferred from sequence or structural similarity /// 0032050 // clathrin heavy chain binding // inferred from direct assay /// 0035615 // clathrin adaptor activity // inferred from mutant phenotype </td> <td> 137.90 </td> <td> 326.02 </td> <td> 1.88 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 218210_at </td> <td> 218210_at </td> <td> NM_024619 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024619.1 /DEF=Homo sapiens hypothetical protein FLJ12171 (FLJ12171), mRNA. /FEA=mRNA /GEN=FLJ12171 /PROD=hypothetical protein FLJ12171 /DB_XREF=gi:13375839 /UG=Hs.31431 hypothetical protein FLJ12171 /FL=gb:AL136631.1 gb:NM_024619.1 </td> <td> NM_024619 </td> <td> fructosamine 3 kinase related protein </td> <td> FN3KRP </td> <td> 79672 </td> <td> NM_024619 /// NR_046408 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td>  </td> <td> 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 30.77 </td> <td> 118.54 </td> <td> 1.88 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208875_s_at </td> <td> 208875_s_at </td> <td> BF796470 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF796470 /FEA=EST /DB_XREF=gi:12101524 /DB_XREF=est:602259926F1 /CLONE=IMAGE:4342999 /UG=Hs.284275 Homo sapiens PAK2 mRNA, complete cds /FL=gb:AF092132.1 </td> <td> BF796470 </td> <td> p21 protein (Cdc42/Rac)-activated kinase 2 </td> <td> PAK2 </td> <td> 5062 </td> <td> NM_002577 </td> <td> 0000278 // mitotic cell cycle // not recorded /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007409 // axonogenesis // not recorded /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // not recorded /// 0030036 // actin cytoskeleton organization // not recorded /// 0031295 // T cell costimulation // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001271 // negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -59.58 </td> <td> 188.54 </td> <td> -1.88 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201086_x_at </td> <td> 201086_x_at </td> <td> NM_003103 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003103.1 /DEF=Homo sapiens SON DNA binding protein (SON), mRNA. /FEA=mRNA /GEN=SON /PROD=SON DNA binding protein /DB_XREF=gi:4507152 /UG=Hs.92909 SON DNA binding protein /FL=gb:NM_003103.1 </td> <td> NM_003103 </td> <td> SON DNA binding protein </td> <td> SON </td> <td> 6651 </td> <td> NM_001291411 /// NM_001291412 /// NM_003103 /// NM_032195 /// NM_138925 /// NM_138927 /// NR_103796 /// NR_103797 /// NR_103798 /// XM_006724043 /// XM_006724044 /// XM_006724045 /// XR_430355 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0006397 // mRNA processing // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050733 // RS domain binding // inferred from electronic annotation </td> <td> 98.98 </td> <td> 548.11 </td> <td> 1.88 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 217738_at </td> <td> 217738_at </td> <td> BF575514 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF575514 /FEA=EST /DB_XREF=gi:11649318 /DB_XREF=est:602133090F1 /CLONE=IMAGE:4288079 /UG=Hs.239138 pre-B-cell colony-enhancing factor /FL=gb:U02020.1 gb:NM_005746.1 </td> <td> BF575514 </td> <td> nicotinamide phosphoribosyltransferase </td> <td> NAMPT </td> <td> 10135 </td> <td> NM_005746 /// NM_182790 /// XM_005250100 </td> <td> 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006769 // nicotinamide metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0009435 // NAD biosynthetic process // inferred from electronic annotation /// 0019363 // pyridine nucleotide biosynthetic process // inferred from electronic annotation /// 0019674 // NAD metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051770 // positive regulation of nitric-oxide synthase biosynthetic process // inferred from direct assay /// 0060612 // adipose tissue development // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004514 // nicotinate-nucleotide diphosphorylase (carboxylating) activity // inferred from electronic annotation /// 0004516 // nicotinate phosphoribosyltransferase activity // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0047280 // nicotinamide phosphoribosyltransferase activity // inferred from electronic annotation </td> <td> -33.38 </td> <td> 293.11 </td> <td> -1.88 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 203736_s_at </td> <td> 203736_s_at </td> <td> NM_003622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003622.1 /DEF=Homo sapiens PTPRF interacting protein, binding protein 1 (liprin beta 1) (PPFIBP1), mRNA.  /FEA=mRNA /GEN=PPFIBP1 /PROD=PTPRF interacting protein, binding protein 1(liprin beta 1) /DB_XREF=gi:4505986 /UG=Hs.133207 PTPRF interacting protein, binding protein 1 (liprin beta 1) /FL=gb:AF034802.1 gb:NM_003622.1 </td> <td> NM_003622 </td> <td> PTPRF interacting protein, binding protein 1 (liprin beta 1) </td> <td> PPFIBP1 </td> <td> 8496 </td> <td> NM_001198915 /// NM_001198916 /// NM_003622 /// NM_177444 /// XM_005253505 /// XM_005253506 /// XM_005253507 /// XM_005253508 /// XM_005253509 /// XM_005253510 /// XM_005253511 /// XM_005253514 /// XM_005253515 /// XM_005253516 /// XM_006719159 /// XM_006719160 /// XM_006719161 </td> <td> 0007155 // cell adhesion // traceable author statement /// 0015074 // DNA integration // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // non-traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008907 // integrase activity // inferred from electronic annotation </td> <td> -23.60 </td> <td> 78.08 </td> <td> -1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 202822_at </td> <td> 202822_at </td> <td> BF221852 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF221852 /FEA=EST /DB_XREF=gi:11129029 /DB_XREF=est:7p37f11.x1 /CLONE=IMAGE:3648141 /UG=Hs.180398 LIM domain-containing preferred translocation partner in lipoma /FL=gb:NM_005578.1 </td> <td> BF221852 </td> <td> LIM domain containing preferred translocation partner in lipoma </td> <td> LPP </td> <td> 4026 </td> <td> NM_001167671 /// NM_001167672 /// NM_005578 /// XM_005247444 /// XM_005247445 /// XM_005247446 /// XM_005247447 /// XM_005247448 /// XM_005247450 /// XM_005247451 /// XM_005247453 /// XM_006713637 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 68.55 </td> <td> 224.00 </td> <td> 1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201336_at </td> <td> 201336_at </td> <td> BC003570 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003570.1 /DEF=Homo sapiens, Similar to vesicle-associated membrane protein 3, clone MGC:2110, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to vesicle-associated membrane protein3 /DB_XREF=gi:13097737 /UG=Hs.66708 vesicle-associated membrane protein 3 (cellubrevin) /FL=gb:BC003570.1 gb:NM_004781.2 </td> <td> BC003570 </td> <td> vesicle-associated membrane protein 3 </td> <td> VAMP3 </td> <td> 9341 </td> <td> NM_004781 </td> <td> 0001921 // positive regulation of receptor recycling // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // traceable author statement /// 0006904 // vesicle docking involved in exocytosis // traceable author statement /// 0006906 // vesicle fusion // not recorded /// 0007269 // neurotransmitter secretion // not recorded /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from sequence or structural similarity /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from sequence or structural similarity /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0043001 // Golgi to plasma membrane protein transport // inferred from electronic annotation /// 0061025 // membrane fusion // traceable author statement </td> <td> 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030141 // secretory granule // inferred from electronic annotation /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031201 // SNARE complex // not recorded /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay </td> <td> 0000149 // SNARE binding // not recorded /// 0005484 // SNAP receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0017075 // syntaxin-1 binding // inferred from electronic annotation </td> <td> -43.82 </td> <td> 798.59 </td> <td> -1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 210514_x_at </td> <td> 210514_x_at </td> <td> AF226990 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF226990.2 /DEF=Homo sapiens MHC class I antigen (HLA-G) mRNA, HLA-G1 allele, complete cds.  /FEA=mRNA /GEN=HLA-G /PROD=MHC class I antigen /DB_XREF=gi:7245285 /UG=Hs.73885 HLA-G histocompatibility antigen, class I, G /FL=gb:M90683.1 gb:M32800.1 gb:NM_002127.1 gb:AF226990.2 </td> <td> AF226990 </td> <td> major histocompatibility complex, class I, G </td> <td> HLA-G </td> <td> 3135 </td> <td> NM_002127 /// XM_006715080 /// XM_006725041 /// XM_006725700 /// XM_006725909 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002666 // positive regulation of T cell tolerance induction // inferred from mutant phenotype /// 0002767 // immune response-inhibiting cell surface receptor signaling pathway // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0042130 // negative regulation of T cell proliferation // inferred from direct assay /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045591 // positive regulation of regulatory T cell differentiation // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 2001199 // negative regulation of dendritic cell differentiation // inferred from direct assay </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0042605 // peptide antigen binding // not recorded /// 0042803 // protein homodimerization activity // non-traceable author statement </td> <td> -70.57 </td> <td> 237.79 </td> <td> -1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 202379_s_at </td> <td> 202379_s_at </td> <td> AI361805 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI361805 /FEA=EST /DB_XREF=gi:4113426 /DB_XREF=est:qz24g07.x1 /CLONE=IMAGE:2027868 /UG=Hs.241493 natural killer-tumor recognition sequence /FL=gb:L04288.2 gb:NM_005385.2 </td> <td> AI361805 </td> <td> natural killer cell triggering receptor </td> <td> NKTR </td> <td> 4820 </td> <td> NM_001012651 /// NM_005385 /// XM_005265173 /// XM_005265174 /// XM_005265176 /// XM_005265178 /// XM_006713171 /// XM_006713172 /// XM_006713173 /// XM_006713174 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0016018 // cyclosporin A binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation </td> <td> 63.62 </td> <td> 179.56 </td> <td> 1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 204785_x_at </td> <td> 204785_x_at </td> <td> NM_000874 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000874.1 /DEF=Homo sapiens interferon (alpha, beta and omega) receptor 2 (IFNAR2), mRNA.  /FEA=mRNA /GEN=IFNAR2 /PROD=interferon (alpha, beta and omega) receptor 2 /DB_XREF=gi:4504600 /UG=Hs.86958 interferon (alpha, beta and omega) receptor 2 /FL=gb:NM_000874.1 gb:L41944.1 </td> <td> NM_000874 </td> <td> interferon (alpha, beta and omega) receptor 2 </td> <td> IFNAR2 </td> <td> 3455 </td> <td> NM_000874 /// NM_001289125 /// NM_001289126 /// NM_001289128 /// NM_207584 /// NM_207585 </td> <td> 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007259 // JAK-STAT cascade // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0035455 // response to interferon-alpha // inferred from direct assay /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004905 // type I interferon receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019962 // type I interferon binding // inferred from physical interaction </td> <td> -39.70 </td> <td> 139.45 </td> <td> -1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200922_at </td> <td> 200922_at </td> <td> NM_006801 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006801.1 /DEF=Homo sapiens KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 (KDELR1), mRNA.  /FEA=mRNA /GEN=KDELR1 /PROD=KDEL receptor 1 /DB_XREF=gi:5803047 /UG=Hs.78040 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 /FL=gb:NM_006801.1 </td> <td> NM_006801 </td> <td> KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 </td> <td> KDELR1 </td> <td> 10945 </td> <td> NM_006801 </td> <td> 0006621 // protein retention in ER lumen // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation </td> <td> 0005046 // KDEL sequence binding // traceable author statement /// 0046923 // ER retention sequence binding // inferred from electronic annotation </td> <td> 36.05 </td> <td> 216.55 </td> <td> 1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212687_at </td> <td> 212687_at </td> <td> AL110164 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL110164.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586I0324 (from clone DKFZp586I0324). /FEA=mRNA /DB_XREF=gi:5817069 /UG=Hs.193700 Homo sapiens mRNA; cDNA DKFZp586I0324 (from clone DKFZp586I0324) </td> <td> AL110164 </td> <td> LIM and senescent cell antigen-like domains 1 /// LIM and senescent cell antigen-like domains 3 /// LIM and senescent cell antigen-like domains 3-like </td> <td> LIMS1 /// LIMS3 /// LIMS3L </td> <td> 3987 /// 96626 /// 100288695 </td> <td> NM_001193482 /// NM_001193483 /// NM_001193484 /// NM_001193485 /// NM_001193488 /// NM_001205288 /// NM_004987 /// NM_033514 /// NR_027467 /// NR_038099 /// XM_005263563 /// XM_005263946 /// XM_005263947 /// XM_005263948 /// XM_005263949 /// XM_005263950 /// XM_005263951 /// XM_006712167 /// XM_006712524 /// XR_244813 </td> <td> 0007569 // cell aging // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -169.73 </td> <td> 1142.39 </td> <td> -1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 218003_s_at </td> <td> 218003_s_at </td> <td> NM_002013 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002013.1 /DEF=Homo sapiens FK506-binding protein 3 (25kD) (FKBP3), mRNA. /FEA=mRNA /GEN=FKBP3 /PROD=FK506-binding protein 3 (25kD) /DB_XREF=gi:4503726 /UG=Hs.306024 FK506-binding protein 3 (25kD) /FL=gb:M96256.1 gb:M90820.1 gb:M90309.1 gb:NM_002013.1 </td> <td> NM_002013 </td> <td> FK506 binding protein 3, 25kDa </td> <td> FKBP3 </td> <td> 2287 </td> <td> NM_002013 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0006457 // protein folding // inferred from electronic annotation /// 0018208 // peptidyl-proline modification //  /// 0061077 // chaperone-mediated protein folding // not recorded </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // not recorded /// 0016020 // membrane // </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 42.25 </td> <td> 249.05 </td> <td> 1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 213001_at </td> <td> 213001_at </td> <td> AF007150 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF007150.1 /DEF=Homo sapiens clone 23767 and 23782 mRNA sequences. /FEA=mRNA /DB_XREF=gi:2852628 /UG=Hs.8025 Homo sapiens clone 23767 and 23782 mRNA sequences </td> <td> AF007150 </td> <td> angiopoietin-like 2 </td> <td> ANGPTL2 </td> <td> 23452 </td> <td> NM_012098 /// XM_006717030 </td> <td> 0007275 // multicellular organismal development // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement </td> <td> 25.63 </td> <td> 132.74 </td> <td> 1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200668_s_at </td> <td> 200668_s_at </td> <td> BC003395 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003395.1 /DEF=Homo sapiens, ubiquitin-conjugating enzyme E2D 3 (homologous to yeast UBC45), clone MGC:5416, mRNA, complete cds.  /FEA=mRNA /PROD=ubiquitin-conjugating enzyme E2D 3 (homologousto yeast UBC45) /DB_XREF=gi:13097281 /UG=Hs.118797 ubiquitin-conjugating enzyme E2D 3 (homologous to yeast UBC45) /FL=gb:U39318.1 gb:BC003395.1 gb:NM_003340.1 </td> <td> BC003395 </td> <td> ubiquitin-conjugating enzyme E2D 3 </td> <td> UBE2D3 </td> <td> 7323 </td> <td> NM_003340 /// NM_181886 /// NM_181887 /// NM_181888 /// NM_181889 /// NM_181890 /// NM_181891 /// NM_181892 /// NM_181893 /// XM_005263200 /// XM_005263205 /// XM_006714297 /// XM_006714298 /// XM_006714299 /// XM_006714300 /// XM_006714301 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030509 // BMP signaling pathway // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0071456 // cellular response to hypoxia // traceable author statement </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> -125.15 </td> <td> 987.60 </td> <td> -1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 202329_at </td> <td> 202329_at </td> <td> NM_004383 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004383.1 /DEF=Homo sapiens c-src tyrosine kinase (CSK), mRNA. /FEA=mRNA /GEN=CSK /PROD=c-src tyrosine kinase /DB_XREF=gi:4758077 /UG=Hs.77793 c-src tyrosine kinase /FL=gb:NM_004383.1 </td> <td> NM_004383 </td> <td> c-src tyrosine kinase </td> <td> CSK </td> <td> 1445 </td> <td> NM_001127190 /// NM_004383 /// XM_005254165 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010989 // negative regulation of low-density lipoprotein particle clearance // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0032715 // negative regulation of interleukin-6 production // inferred from electronic annotation /// 0033673 // negative regulation of kinase activity // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from electronic annotation /// 0042997 // negative regulation of Golgi to plasma membrane protein transport // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0045779 // negative regulation of bone resorption // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0050765 // negative regulation of phagocytosis // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0060368 // regulation of Fc receptor mediated stimulatory signaling pathway // inferred from electronic annotation /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from physical interaction /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from electronic annotation </td> <td> -48.18 </td> <td> 256.76 </td> <td> -1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 213864_s_at </td> <td> 213864_s_at </td> <td> AI985751 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI985751 /FEA=EST /DB_XREF=gi:5813028 /DB_XREF=est:wr76h07.x1 /CLONE=IMAGE:2493661 /UG=Hs.179662 nucleosome assembly protein 1-like 1 </td> <td> AI985751 </td> <td> nucleosome assembly protein 1-like 1 </td> <td> NAP1L1 </td> <td> 4673 </td> <td> NM_004537 /// NM_139207 /// XM_005268895 /// XM_005268896 /// XM_006719422 /// XM_006719423 /// XM_006719424 /// XM_006719425 /// XR_245930 /// XR_245931 /// XR_245932 </td> <td> 0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -88.77 </td> <td> 1358.39 </td> <td> -1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200052_s_at </td> <td> 200052_s_at </td> <td> NM_004515 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004515.1 /DEF=Homo sapiens interleukin enhancer binding factor 2, 45kD (ILF2), mRNA.  /FEA=mRNA /GEN=ILF2 /PROD=interleukin enhancer binding factor 2, 45kD /DB_XREF=gi:4758601 /UG=Hs.75117 interleukin enhancer binding factor 2, 45kD /FL=gb:BC000382.1 gb:NM_004515.1 gb:U10323.1 </td> <td> NM_004515 </td> <td> interleukin enhancer binding factor 2 </td> <td> ILF2 </td> <td> 3608 </td> <td> NM_001267809 /// NM_004515 </td> <td> 0006351 // transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 92.50 </td> <td> 527.88 </td> <td> 1.87 </td> <td> 0.10 </td> <td> 0.15 </td> <td> -4.55 </td> </tr>
  <tr> <td> 209383_at </td> <td> 209383_at </td> <td> BC003637 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003637.1 /DEF=Homo sapiens, Similar to DNA-damage-inducible transcript 3, clone MGC:4154, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to DNA-damage-inducible transcript 3 /DB_XREF=gi:13177717 /UG=Hs.279946 methionine-tRNA synthetase /FL=gb:BC003637.1 gb:NM_004083.1 </td> <td> BC003637 </td> <td> DNA-damage-inducible transcript 3 </td> <td> DDIT3 </td> <td> 1649 </td> <td> NM_001195053 /// NM_001195054 /// NM_001195055 /// NM_001195056 /// NM_001195057 /// NM_004083 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001955 // blood vessel maturation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // traceable author statement /// 0006983 // ER overload response // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032757 // positive regulation of interleukin-8 production // inferred from mutant phenotype /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0042594 // response to starvation // inferred from electronic annotation /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043620 // regulation of DNA-templated transcription in response to stress // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044324 // regulation of transcription involved in anterior/posterior axis specification // inferred from sequence or structural similarity /// 0045454 // cell redox homeostasis // inferred from direct assay /// 0045662 // negative regulation of myoblast differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0051209 // release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from direct assay /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 2000016 // negative regulation of determination of dorsal identity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -70.15 </td> <td> 136.60 </td> <td> -1.86 </td> <td> 0.10 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200882_s_at </td> <td> 200882_s_at </td> <td> NM_002810 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002810.1 /DEF=Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 (PSMD4), mRNA.  /FEA=mRNA /GEN=PSMD4 /PROD=proteasome (prosome, macropain) 26S subunit,non-ATPase, 4 /DB_XREF=gi:5292160 /UG=Hs.148495 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 /FL=gb:BC002365.1 gb:U24704.1 gb:NM_002810.1 </td> <td> NM_002810 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 </td> <td> PSMD4 </td> <td> 5710 </td> <td> NM_002810 /// NM_153822 /// XM_005245354 /// XM_006711464 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008540 // proteasome regulatory particle, base subcomplex // inferred from electronic annotation /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -72.45 </td> <td> 328.43 </td> <td> -1.86 </td> <td> 0.10 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 214687_x_at </td> <td> 214687_x_at </td> <td> AK026577 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026577.1 /DEF=Homo sapiens cDNA: FLJ22924 fis, clone KAT06977, highly similar to HSALDAR Human fibroblast mRNA for aldolase A.  /FEA=mRNA /DB_XREF=gi:10439461 /UG=Hs.273415 aldolase A, fructose-bisphosphate </td> <td> AK026577 </td> <td> aldolase A, fructose-bisphosphate </td> <td> ALDOA </td> <td> 226 </td> <td> NM_000034 /// NM_001127617 /// NM_001243175 /// NM_001243177 /// NM_184041 /// NM_184043 /// XM_006721109 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006000 // fructose metabolic process // inferred from mutant phenotype /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // inferred from mutant phenotype /// 0006096 // glycolytic process // traceable author statement /// 0006754 // ATP biosynthetic process // inferred from mutant phenotype /// 0006941 // striated muscle contraction // inferred from mutant phenotype /// 0007015 // actin filament organization // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030388 // fructose 1,6-bisphosphate metabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0046716 // muscle cell cellular homeostasis // inferred from mutant phenotype /// 0051289 // protein homotetramerization // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031430 // M band // inferred from electronic annotation /// 0031674 // I band // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004332 // fructose-bisphosphate aldolase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0015631 // tubulin binding // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0042802 // identical protein binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070061 // fructose binding // inferred from direct assay </td> <td> -384.40 </td> <td> 1507.97 </td> <td> -1.86 </td> <td> 0.10 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 200731_s_at </td> <td> 200731_s_at </td> <td> AW165960 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW165960 /FEA=EST /DB_XREF=gi:6397485 /DB_XREF=est:xf43a12.x1 /CLONE=IMAGE:2620798 /UG=Hs.227777 protein tyrosine phosphatase type IVA, member 1 /FL=gb:U48296.1 gb:NM_003463.1 </td> <td> AW165960 </td> <td> protein tyrosine phosphatase type IVA, member 1 </td> <td> PTP4A1 </td> <td> 7803 </td> <td> NM_003463 /// XM_006715563 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // non-traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009898 // cytoplasmic side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // non-traceable author statement /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> 33.42 </td> <td> 215.49 </td> <td> 1.86 </td> <td> 0.10 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201901_s_at </td> <td> 201901_s_at </td> <td> Z14077 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:Z14077.1 /DEF=H.sapiens mRNA for YY1NF-E1 protein. /FEA=mRNA /PROD=YY1 NF-E1 /DB_XREF=gi:38010 /UG=Hs.97496 YY1 transcription factor /FL=gb:M77698.1 gb:M76541.1 gb:NM_003403.2 </td> <td> Z14077 </td> <td> YY1 transcription factor </td> <td> YY1 </td> <td> 7528 </td> <td> NM_003403 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006403 // RNA localization // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from mutant phenotype /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010225 // response to UV-C // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0034644 // cellular response to UV // inferred from mutant phenotype /// 0034696 // response to prostaglandin F // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0031011 // Ino80 complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from electronic annotation </td> <td> 0000400 // four-way junction DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -49.95 </td> <td> 274.95 </td> <td> -1.86 </td> <td> 0.10 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208633_s_at </td> <td> 208633_s_at </td> <td> W61052 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W61052 /FEA=EST /DB_XREF=gi:1367812 /DB_XREF=est:zd29g11.r1 /CLONE=IMAGE:342116 /UG=Hs.108258 actin binding protein; macrophin (microfilament and actin filament cross-linker protein) /FL=gb:AB029290.1 </td> <td> W61052 </td> <td> microtubule-actin crosslinking factor 1 </td> <td> MACF1 </td> <td> 23499 </td> <td> NM_012090 /// NM_033044 /// XM_005270694 /// XM_005270695 /// XM_005270696 /// XM_005270697 /// XM_005270698 /// XM_005270700 /// XM_006710519 /// XM_006710520 /// XM_006710521 /// XM_006710522 /// XM_006710523 /// XM_006710524 /// XM_006710525 /// XM_006710526 /// XM_006710527 /// XM_006710528 /// XM_006710529 /// XM_006710530 /// XM_006710531 /// XM_006710532 /// XM_006710533 /// XM_006710534 /// XM_006710535 /// XM_006710536 /// XM_006710537 /// XM_006710538 /// XM_006710539 /// XM_006710540 </td> <td> 0001707 // mesoderm formation // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006620 // posttranslational protein targeting to membrane // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0010632 // regulation of epithelial cell migration // inferred from sequence or structural similarity /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay /// 0051893 // regulation of focal adhesion assembly // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // non-traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // non-traceable author statement </td> <td> -83.13 </td> <td> 249.36 </td> <td> -1.85 </td> <td> 0.10 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208948_s_at </td> <td> 208948_s_at </td> <td> BC000830 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000830.1 /DEF=Homo sapiens, clone MGC:4921, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:4921) /DB_XREF=gi:12654050 /UG=Hs.6113 staufen (Drosophila, RNA-binding protein) /FL=gb:BC000830.1 gb:AF061938.1 gb:NM_017452.1 </td> <td> BC000830 </td> <td> staufen double-stranded RNA binding protein 1 </td> <td> STAU1 </td> <td> 6780 </td> <td> NM_001037328 /// NM_004602 /// NM_017452 /// NM_017453 /// NM_017454 /// XM_005260524 /// XM_005260525 /// XM_005260526 /// XM_005260527 /// XM_005260528 /// XM_005260529 /// XM_006723865 /// XM_006723866 /// XM_006723867 /// XM_006723868 /// XM_006723869 </td> <td> 0008298 // intracellular mRNA localization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044297 // cell body // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008157 // protein phosphatase 1 binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -67.15 </td> <td> 560.75 </td> <td> -1.85 </td> <td> 0.10 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 221549_at </td> <td> 221549_at </td> <td> AF337808 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF337808.1 /DEF=Homo sapiens glutamate rich WD repeat protein (GRWD) mRNA, complete cds.  /FEA=mRNA /GEN=GRWD /PROD=glutamate rich WD repeat protein /DB_XREF=gi:13274610 /UG=Hs.218842 Homo sapiens glutamate rich WD repeat protein (GRWD) mRNA, complete cds /FL=gb:BC002440.1 gb:AF337808.1 </td> <td> AF337808 </td> <td> glutamate-rich WD repeat containing 1 </td> <td> GRWD1 </td> <td> 83743 </td> <td> NM_031485 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 27.25 </td> <td> 37.23 </td> <td> 1.85 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 215111_s_at </td> <td> 215111_s_at </td> <td> AK027071 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK027071.1 /DEF=Homo sapiens cDNA: FLJ23418 fis, clone HEP21245, highly similar to HSU35048 Human TSC-22 protein mRNA.  /FEA=mRNA /DB_XREF=gi:10440100 /UG=Hs.114360 transforming growth factor beta-stimulated protein TSC-22 </td> <td> AK027071 </td> <td> TSC22 domain family, member 1 </td> <td> TSC22D1 </td> <td> 8848 </td> <td> NM_001243797 /// NM_001243798 /// NM_001243799 /// NM_006022 /// NM_183422 /// XM_005266582 /// XM_005266583 /// XM_006719887 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 37.63 </td> <td> 240.79 </td> <td> 1.84 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 243_g_at </td> <td> 243_g_at </td> <td> M64571 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> Affymetrix Proprietary Database </td> <td> M64571 /FEATURE=mRNA /DEFINITION=HUMMAP4 Human microtubule-associated protein 4 mRNA, complete cds </td> <td> M64571 </td> <td> microtubule-associated protein 4 </td> <td> MAP4 </td> <td> 4134 </td> <td> NM_001134364 /// NM_001134365 /// NM_002375 /// NM_030884 /// NM_030885 /// XM_005265133 /// XM_005265134 /// XM_005265135 /// XM_005265138 /// XM_005265139 /// XM_005265147 /// XM_005265155 /// XM_005265157 /// XM_005265158 /// XM_005265159 /// XM_006713140 /// XM_006713141 /// XM_006713142 /// XM_006713143 /// XM_006713144 /// XM_006713145 /// XM_006713146 /// XM_006713147 /// XM_006713148 /// XM_006713149 /// XM_006713150 /// XM_006713151 /// XM_006713152 /// XM_006713153 /// XM_006713154 /// XM_006713155 /// XM_006713156 /// XM_006713157 /// XM_006713158 /// XM_006713159 /// XM_006713160 /// XM_006713161 /// XM_006713162 /// XM_006713163 </td> <td> 0007052 // mitotic spindle organization // inferred from mutant phenotype /// 0051012 // microtubule sliding // inferred from mutant phenotype /// 0051294 // establishment of spindle orientation // inferred from genetic interaction /// 0051294 // establishment of spindle orientation // inferred from mutant phenotype /// 0051301 // cell division // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay </td> <td> 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 45.45 </td> <td> 352.80 </td> <td> 1.84 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 207721_x_at </td> <td> 207721_x_at </td> <td> NM_005340 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005340.1 /DEF=Homo sapiens histidine triad nucleotide-binding protein (HINT), mRNA.  /FEA=mRNA /GEN=HINT /PROD=histidine triad nucleotide-binding protein /DB_XREF=gi:4885412 /UG=Hs.256697 histidine triad nucleotide-binding protein /FL=gb:U51004.1 gb:NM_005340.1 </td> <td> NM_005340 </td> <td> histidine triad nucleotide binding protein 1 </td> <td> HINT1 </td> <td> 3094 </td> <td> NM_005340 /// NR_024610 /// NR_024611 /// NR_073488 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009154 // purine ribonucleotide catabolic process // inferred from direct assay /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from mutant phenotype </td> <td> 0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // traceable author statement /// 0016787 // hydrolase activity // inferred from direct assay </td> <td> -130.00 </td> <td> 1456.60 </td> <td> -1.84 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 217925_s_at </td> <td> 217925_s_at </td> <td> NM_022758 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022758.1 /DEF=Homo sapiens hypothetical protein FLJ22195 (FLJ22195), mRNA. /FEA=mRNA /GEN=FLJ22195 /PROD=hypothetical protein FLJ22195 /DB_XREF=gi:12232426 /UG=Hs.25999 hypothetical protein FLJ22195 /FL=gb:NM_022758.1 </td> <td> NM_022758 </td> <td> chromosome 6 open reading frame 106 </td> <td> C6orf106 </td> <td> 64771 </td> <td> NM_022758 /// NM_024294 /// XM_005249298 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 23.42 </td> <td> 61.74 </td> <td> 1.84 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 219598_s_at </td> <td> 219598_s_at </td> <td> NM_016104 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016104.1 /DEF=Homo sapiens PTD013 protein (PTD013), mRNA. /FEA=mRNA /GEN=PTD013 /PROD=PTD013 protein /DB_XREF=gi:7706668 /UG=Hs.279857 PTD013 protein /FL=gb:AF092134.1 gb:NM_016104.1 </td> <td> NM_016104 </td> <td> RWD domain containing 1 </td> <td> RWDD1 </td> <td> 51389 </td> <td> NM_001007464 /// NM_015952 /// NM_016104 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 38.33 </td> <td> 242.91 </td> <td> 1.84 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 219091_s_at </td> <td> 219091_s_at </td> <td> NM_024756 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024756.1 /DEF=Homo sapiens hypothetical protein FLJ13465 (FLJ13465), mRNA. /FEA=mRNA /GEN=FLJ13465 /PROD=hypothetical protein FLJ13465 /DB_XREF=gi:13376090 /UG=Hs.127216 hypothetical protein FLJ13465 /FL=gb:NM_024756.1 </td> <td> NM_024756 </td> <td> multimerin 2 </td> <td> MMRN2 </td> <td> 79812 </td> <td> NM_024756 /// XM_005270153 /// XM_006717970 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0030948 // negative regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0090051 // negative regulation of cell migration involved in sprouting angiogenesis // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 104.28 </td> <td> 439.51 </td> <td> 1.84 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 218008_at </td> <td> 218008_at </td> <td> NM_017994 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017994.1 /DEF=Homo sapiens hypothetical protein FLJ10099 (FLJ10099), mRNA. /FEA=mRNA /GEN=FLJ10099 /PROD=hypothetical protein FLJ10099 /DB_XREF=gi:8922228 /UG=Hs.278619 hypothetical protein FLJ10099 /FL=gb:NM_017994.1 </td> <td> NM_017994 </td> <td> transmembrane protein 248 </td> <td> TMEM248 </td> <td> 55069 </td> <td> NM_017994 /// XM_005250482 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -45.20 </td> <td> 310.52 </td> <td> -1.84 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 209453_at </td> <td> 209453_at </td> <td> M81768 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M81768.1 /DEF=Human NaH antiporter (APNH1) mRNA, complete cds. /FEA=mRNA /GEN=APNH /PROD=NaH antiporter /DB_XREF=gi:178752 /UG=Hs.170222 solute carrier family 9 (sodiumhydrogen exchanger), isoform 1 (antiporter, Na+H+, amiloride sensitive) /FL=gb:M81768.1 gb:AF141350.1 gb:AF141351.1 gb:AF141352.1 gb:AF141353.1 gb:AF141354.1 gb:AF141355.1 gb:AF141356.1 gb:AF141357.1 gb:AF141358.1 gb:AF141359.1 gb:AF146430.1 gb:AF146431.1 gb:AF146432.1 gb:AF146433.1 gb:AF146434.1 gb:AF146435.1 gb:AF146436.1 gb:AF146437.1 gb:AF146438.1 gb:AF146439.1 </td> <td> M81768 </td> <td> solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 </td> <td> SLC9A1 </td> <td> 6548 </td> <td> NM_003047 /// NR_046474 </td> <td> 0001101 // response to acid // inferred from direct assay /// 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006812 // cation transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006885 // regulation of pH // inferred from direct assay /// 0006885 // regulation of pH // traceable author statement /// 0010447 // response to acidity // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030212 // hyaluronan metabolic process // traceable author statement /// 0030214 // hyaluronan catabolic process // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from direct assay /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0035794 // positive regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045760 // positive regulation of action potential // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from sequence or structural similarity /// 0051453 // regulation of intracellular pH // inferred from direct assay /// 0051930 // regulation of sensory perception of pain // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0070997 // neuron death // inferred from electronic annotation /// 0071436 // sodium ion export // inferred from sequence or structural similarity /// 0071468 // cellular response to acidity // inferred from sequence or structural similarity /// 0071805 // potassium ion transmembrane transport // inferred from direct assay /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation /// 0015299 // solute:proton antiporter activity // traceable author statement /// 0015385 // sodium:proton antiporter activity // inferred from direct assay /// 0015385 // sodium:proton antiporter activity // inferred from sequence or structural similarity /// 0015386 // potassium:proton antiporter activity // inferred from direct assay /// 0042803 // protein homodimerization activity // traceable author statement /// 0048306 // calcium-dependent protein binding // inferred from direct assay </td> <td> -48.92 </td> <td> 116.74 </td> <td> -1.84 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 217807_s_at </td> <td> 217807_s_at </td> <td> NM_015710 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015710.1 /DEF=Homo sapiens glioma tumor suppressor candidate region gene 2 (GLTSCR2), mRNA.  /FEA=mRNA /GEN=GLTSCR2 /PROD=glioma tumor suppressor candidate region gene 2 /DB_XREF=gi:7657129 /UG=Hs.2237 glioma tumor suppressor candidate region gene 2 /FL=gb:AF182076.1 gb:NM_015710.1 </td> <td> NM_015710 </td> <td> glioma tumor suppressor candidate region gene 2 /// small nucleolar RNA, C/D box 23 </td> <td> GLTSCR2 /// SNORD23 </td> <td> 29997 /// 692091 </td> <td> NM_015710 /// NR_003048 </td> <td>  </td> <td> 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -267.93 </td> <td> 946.49 </td> <td> -1.83 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 208818_s_at </td> <td> 208818_s_at </td> <td> BC000419 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000419.1 /DEF=Homo sapiens, catechol-O-methyltransferase, clone MGC:8663, mRNA, complete cds.  /FEA=mRNA /PROD=catechol-O-methyltransferase /DB_XREF=gi:12653300 /UG=Hs.240013 catechol-O-methyltransferase /FL=gb:BC000419.1 gb:M58525.1 gb:M65212.1 gb:NM_007310.1 gb:NM_000754.2 </td> <td> BC000419 </td> <td> catechol-O-methyltransferase </td> <td> COMT </td> <td> 1312 </td> <td> NM_000754 /// NM_001135161 /// NM_001135162 /// NM_007310 /// XM_005261229 </td> <td> 0006584 // catecholamine metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0009712 // catechol-containing compound metabolic process // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // inferred from electronic annotation /// 0032259 // methylation // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0042135 // neurotransmitter catabolic process // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // traceable author statement /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042420 // dopamine catabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045963 // negative regulation of dopamine metabolic process // inferred from electronic annotation /// 0048265 // response to pain // inferred from electronic annotation /// 0048609 // multicellular organismal reproductive process // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050668 // positive regulation of homocysteine metabolic process // inferred from electronic annotation </td> <td> 0005622 // intracellular // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008171 // O-methyltransferase activity // traceable author statement /// 0016206 // catechol O-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -89.97 </td> <td> 740.31 </td> <td> -1.83 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 211375_s_at </td> <td> 211375_s_at </td> <td> AF141870 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF141870.1 /DEF=Homo sapiens translational control protein 80 mRNA, complete cds. /FEA=mRNA /PROD=translational control protein 80 /DB_XREF=gi:5006601 /UG=Hs.256583 interleukin enhancer binding factor 3, 90kD /FL=gb:AF141870.1 </td> <td> AF141870 </td> <td> interleukin enhancer binding factor 3, 90kDa </td> <td> ILF3 </td> <td> 3609 </td> <td> NM_001137673 /// NM_004516 /// NM_012218 /// NM_017620 /// NM_153464 /// XM_005259895 /// XM_006722742 </td> <td> 0000279 // M phase // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0045071 // negative regulation of viral genome replication // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003723 // RNA binding // non-traceable author statement /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -39.03 </td> <td> 295.56 </td> <td> -1.83 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 212150_at </td> <td> 212150_at </td> <td> AA805651 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA805651 /FEA=EST /DB_XREF=gi:2874401 /DB_XREF=est:nz41a04.s1 /CLONE=IMAGE:1290318 /UG=Hs.84087 KIAA0143 protein </td> <td> AA805651 </td> <td> EFR3 homolog A (S. cerevisiae) </td> <td> EFR3A </td> <td> 23167 </td> <td> NM_015137 /// XM_005250849 </td> <td>  </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation </td> <td> 40.70 </td> <td> 165.75 </td> <td> 1.83 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 201721_s_at </td> <td> 201721_s_at </td> <td> NM_006762 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006762.1 /DEF=Homo sapiens Lysosomal-associated multispanning membrane protein-5 (LAPTM5), mRNA.  /FEA=mRNA /GEN=LAPTM5 /PROD=Lysosomal-associated multispanning membraneprotein-5 /DB_XREF=gi:5803055 /UG=Hs.79356 Lysosomal-associated multispanning membrane protein-5 /FL=gb:U51240.1 gb:NM_006762.1 gb:U30498.1 </td> <td> NM_006762 </td> <td> lysosomal protein transmembrane 5 </td> <td> LAPTM5 </td> <td> 7805 </td> <td> NM_006762 </td> <td> 0006810 // transport // inferred from electronic annotation </td> <td> 0005764 // lysosome // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -98.30 </td> <td> 762.27 </td> <td> -1.83 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 41386_i_at </td> <td> 41386_i_at </td> <td> AB002344 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AB002344:Human mRNA for KIAA0346 gene, partial cds /cds=(0,4852) /gb=AB002344 /gi=2280479 /ug=Hs.103915 /len=6121 </td> <td> AB002344 </td> <td> lysine (K)-specific demethylase 6B </td> <td> KDM6B </td> <td> 23135 </td> <td> NM_001080424 /// XM_005256549 /// XM_005256550 /// XM_005256551 /// XM_005256552 /// XM_005256554 /// XM_006721483 /// XM_006721484 </td> <td> 0006954 // inflammatory response // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016577 // histone demethylation // inferred from electronic annotation /// 0045446 // endothelial cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048333 // mesodermal cell differentiation // inferred from sequence or structural similarity /// 0055007 // cardiac muscle cell differentiation // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071557 // histone H3-K27 demethylation // not recorded </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation /// 0071558 // histone demethylase activity (H3-K27 specific) // not recorded </td> <td> -51.75 </td> <td> 164.28 </td> <td> -1.82 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.55 </td> </tr>
  <tr> <td> 213390_at </td> <td> 213390_at </td> <td> AB028987 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB028987.1 /DEF=Homo sapiens mRNA for KIAA1064 protein, partial cds. /FEA=mRNA /GEN=KIAA1064 /PROD=KIAA1064 protein /DB_XREF=gi:5689464 /UG=Hs.72134 KIAA1064 protein </td> <td> AB028987 </td> <td> zinc finger CCCH-type containing 4 </td> <td> ZC3H4 </td> <td> 23211 </td> <td> NM_015168 /// XM_005258676 /// XM_005258677 /// XM_005258678 /// XM_006723113 </td> <td>  </td> <td>  </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -34.33 </td> <td> 289.59 </td> <td> -1.82 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.56 </td> </tr>
  <tr> <td> 204588_s_at </td> <td> 204588_s_at </td> <td> NM_003982 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003982.1 /DEF=Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 (SLC7A7), mRNA.  /FEA=mRNA /GEN=SLC7A7 /PROD=solute carrier family 7 (cationic amino acidtransporter, y+ system), member 7 /DB_XREF=gi:4507054 /UG=Hs.194693 solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 /FL=gb:BC003062.1 gb:AF092032.1 gb:NM_003982.1 gb:AB011263.1 </td> <td> NM_003982 </td> <td> solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 </td> <td> SLC7A7 </td> <td> 9056 </td> <td> NM_001126105 /// NM_001126106 /// NM_003982 /// NR_040448 /// XM_006720302 </td> <td> 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation </td> <td> 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation </td> <td> -45.20 </td> <td> 179.00 </td> <td> -1.82 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200978_at </td> <td> 200978_at </td> <td> NM_005917 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005917.1 /DEF=Homo sapiens malate dehydrogenase 1, NAD (soluble) (MDH1), mRNA. /FEA=mRNA /GEN=MDH1 /PROD=malate dehydrogenase 1, NAD (soluble) /DB_XREF=gi:5174538 /UG=Hs.75375 malate dehydrogenase 1, NAD (soluble) /FL=gb:D55654.1 gb:U20352.1 gb:NM_005917.1 </td> <td> NM_005917 </td> <td> malate dehydrogenase 1, NAD (soluble) </td> <td> MDH1 </td> <td> 4190 </td> <td> NM_001199111 /// NM_001199112 /// NM_005917 /// XM_005264320 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0006108 // malate metabolic process // inferred from electronic annotation /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0019674 // NAD metabolic process // inferred from electronic annotation /// 0044262 // cellular carbohydrate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004470 // malic enzyme activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016615 // malate dehydrogenase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0030060 // L-malate dehydrogenase activity // traceable author statement /// 0047860 // diiodophenylpyruvate reductase activity // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 26.73 </td> <td> 556.59 </td> <td> 1.82 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201956_s_at </td> <td> 201956_s_at </td> <td> NM_014236 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014236.1 /DEF=Homo sapiens glyceronephosphate O-acyltransferase (GNPAT), mRNA. /FEA=mRNA /GEN=GNPAT /PROD=glyceronephosphate O-acyltransferase /DB_XREF=gi:7657133 /UG=Hs.12482 glyceronephosphate O-acyltransferase /FL=gb:BC000450.1 gb:AF043937.1 gb:NM_014236.1 </td> <td> NM_014236 </td> <td> glyceronephosphate O-acyltransferase </td> <td> GNPAT </td> <td> 8443 </td> <td> NM_014236 /// XM_005273313 /// XM_005273314 </td> <td> 0006644 // phospholipid metabolic process // traceable author statement /// 0006650 // glycerophospholipid metabolic process // inferred from electronic annotation /// 0006654 // phosphatidic acid biosynthetic process // traceable author statement /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008611 // ether lipid biosynthetic process // inferred from direct assay /// 0008611 // ether lipid biosynthetic process // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0021587 // cerebellum morphogenesis // inferred from electronic annotation /// 0030913 // paranodal junction assembly // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement /// 0070542 // response to fatty acid // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // non-traceable author statement /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // traceable author statement /// 0005782 // peroxisomal matrix // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0008374 // O-acyltransferase activity // inferred from electronic annotation /// 0016287 // glycerone-phosphate O-acyltransferase activity // inferred from direct assay /// 0016287 // glycerone-phosphate O-acyltransferase activity // traceable author statement /// 0016290 // palmitoyl-CoA hydrolase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation </td> <td> -31.12 </td> <td> 205.51 </td> <td> -1.82 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208910_s_at </td> <td> 208910_s_at </td> <td> L04636 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L04636.1 /DEF=Homo sapiens pre-mRNA splicing factor 2 p32 subunit (SF2p32) mRNA, complete cds.  /FEA=mRNA /PROD=splicing factor /DB_XREF=gi:338044 /UG=Hs.78614 complement component 1, q subcomponent binding protein /FL=gb:NM_001212.2 gb:BC000435.1 gb:L04636.1 </td> <td> L04636 </td> <td> complement component 1, q subcomponent binding protein </td> <td> C1QBP </td> <td> 708 </td> <td> NM_001212 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002376 // immune system process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007597 // blood coagulation, intrinsic pathway // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase signaling // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030449 // regulation of complement activation // inferred from direct assay /// 0032689 // negative regulation of interferon-gamma production // inferred from direct assay /// 0032695 // negative regulation of interleukin-12 production // inferred from direct assay /// 0039534 // negative regulation of MDA-5 signaling pathway // inferred from direct assay /// 0039536 // negative regulation of RIG-I signaling pathway // inferred from direct assay /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042256 // mature ribosome assembly // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from mutant phenotype /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0050687 // negative regulation of defense response to virus // inferred from mutant phenotype /// 0051897 // positive regulation of protein kinase B signaling // inferred from mutant phenotype /// 0070131 // positive regulation of mitochondrial translation // inferred from sequence or structural similarity /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from direct assay /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from mutant phenotype /// 1901165 // positive regulation of trophoblast cell migration // inferred from mutant phenotype /// 2000510 // positive regulation of dendritic cell chemotaxis // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0001849 // complement component C1q binding // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003729 // mRNA binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005540 // hyaluronic acid binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from direct assay /// 0030984 // kininogen binding // inferred from direct assay /// 0031690 // adrenergic receptor binding // inferred from sequence or structural similarity /// 0097177 // mitochondrial ribosome binding // inferred from sequence or structural similarity </td> <td> 115.03 </td> <td> 533.96 </td> <td> 1.82 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.56 </td> </tr>
  <tr> <td> 202343_x_at </td> <td> 202343_x_at </td> <td> NM_001862 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001862.1 /DEF=Homo sapiens cytochrome c oxidase subunit Vb (COX5B), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=COX5B /PROD=cytochrome c oxidase subunit Vb /DB_XREF=gi:4502982 /UG=Hs.1342 cytochrome c oxidase subunit Vb /FL=gb:M19961.1 gb:NM_001862.1 </td> <td> NM_001862 </td> <td> cytochrome c oxidase subunit Vb </td> <td> COX5B </td> <td> 1329 </td> <td> NM_001862 </td> <td> 0007585 // respiratory gaseous exchange // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 28.67 </td> <td> 421.84 </td> <td> 1.82 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212680_x_at </td> <td> 212680_x_at </td> <td> BE305165 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE305165 /FEA=EST /DB_XREF=gi:9177184 /DB_XREF=est:601186685T1 /CLONE=IMAGE:2959580 /UG=Hs.100623 phospholipase C, beta 3, neighbor pseudogene </td> <td> BE305165 </td> <td> protein phosphatase 1, regulatory (inhibitor) subunit 14B </td> <td> PPP1R14B </td> <td> 26472 </td> <td> NM_138689 </td> <td> 0042325 // regulation of phosphorylation // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0008599 // protein phosphatase type 1 regulator activity // inferred from electronic annotation /// 0019212 // phosphatase inhibitor activity // inferred from electronic annotation </td> <td> -36.38 </td> <td> 392.39 </td> <td> -1.82 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.56 </td> </tr>
  <tr> <td> 216304_x_at </td> <td> 216304_x_at </td> <td> AJ295618 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AJ295618 /DEF=Homo sapiens FTSH gene for putative ATPases, exons 1 and 2 and join CDS /FEA=mRNA /DB_XREF=gi:9506352 /UG=Hs.206521 YME1 (S.cerevisiae)-like 1 </td> <td> AJ295618 </td> <td> YME1-like 1 ATPase </td> <td> YME1L1 </td> <td> 10730 </td> <td> NM_001253866 /// NM_014263 /// NM_139312 /// NM_139313 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -103.83 </td> <td> 592.94 </td> <td> -1.82 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212369_at </td> <td> 212369_at </td> <td> AI264312 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI264312 /FEA=EST /DB_XREF=gi:3872515 /DB_XREF=est:qi09a10.x1 /CLONE=IMAGE:1855962 /UG=Hs.103315 trinucleotide repeat containing 1 </td> <td> AI264312 </td> <td> zinc finger protein 384 </td> <td> ZNF384 </td> <td> 171017 </td> <td> NM_001039916 /// NM_001039917 /// NM_001039918 /// NM_001039919 /// NM_001039920 /// NM_001135734 /// NM_133476 /// XM_006718963 /// XM_006718964 /// XM_006718965 /// XM_006718966 /// XM_006718967 /// XM_006718968 /// XM_006718969 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050714 // positive regulation of protein secretion // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -25.23 </td> <td> 178.06 </td> <td> -1.81 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.56 </td> </tr>
  <tr> <td> 217982_s_at </td> <td> 217982_s_at </td> <td> NM_006791 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006791.1 /DEF=Homo sapiens MORF-related gene 15 (MRG15), mRNA. /FEA=mRNA /GEN=MRG15 /PROD=MORF-related gene 15 /DB_XREF=gi:5803101 /UG=Hs.6353 MORF-related gene 15 /FL=gb:BC002936.1 gb:AF070664.1 gb:AF100615.1 gb:NM_006791.1 gb:AF161546.1 gb:AF167173.1 </td> <td> NM_006791 </td> <td> mortality factor 4 like 1 </td> <td> MORF4L1 </td> <td> 10933 </td> <td> NM_001265603 /// NM_001265604 /// NM_001265605 /// NM_006791 /// NM_206839 </td> <td> 0000724 // double-strand break repair via homologous recombination // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0043968 // histone H2A acetylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016580 // Sin3 complex // inferred from direct assay /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -278.12 </td> <td> 1738.44 </td> <td> -1.81 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.56 </td> </tr>
  <tr> <td> 203095_at </td> <td> 203095_at </td> <td> NM_002453 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002453.1 /DEF=Homo sapiens mitochondrial translational initiation factor 2 (MTIF2), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=MTIF2 /PROD=mitochondrial translational initiation factor 2precursor /DB_XREF=gi:4505276 /UG=Hs.149894 mitochondrial translational initiation factor 2 /FL=gb:NM_002453.1 gb:L34600.1 </td> <td> NM_002453 </td> <td> mitochondrial translational initiation factor 2 </td> <td> MTIF2 </td> <td> 4528 </td> <td> NM_001005369 /// NM_002453 /// XM_005264335 /// XM_006712023 /// XM_006712024 </td> <td> 0001732 // formation of translation initiation complex // inferred from sequence or structural similarity /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from sequence or structural similarity /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0032790 // ribosome disassembly // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // inferred from sequence or structural similarity /// 0043024 // ribosomal small subunit binding // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -25.97 </td> <td> 132.79 </td> <td> -1.81 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.56 </td> </tr>
  <tr> <td> 31874_at </td> <td> 31874_at </td> <td> Y07846 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. Y07846:H.sapiens mRNA for GAR22 protein /cds=(132,1145) /gb=Y07846 /gi=1666070 /ug=Hs.15346 /len=2238 </td> <td> Y07846 </td> <td> growth arrest-specific 2 like 1 </td> <td> GAS2L1 </td> <td> 10634 </td> <td> NM_001278730 /// NM_006478 /// NM_152236 /// NM_152237 </td> <td> 0001578 // microtubule bundle formation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0009267 // cellular response to starvation // inferred from sequence or structural similarity /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0045647 // negative regulation of erythrocyte differentiation // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from direct assay </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0001725 // stress fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from direct assay /// 0008093 // cytoskeletal adaptor activity // inferred from direct assay /// 0046966 // thyroid hormone receptor binding // inferred from direct assay </td> <td> 33.35 </td> <td> 159.38 </td> <td> 1.81 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.56 </td> </tr>
  <tr> <td> 218467_at </td> <td> 218467_at </td> <td> NM_020232 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020232.1 /DEF=Homo sapiens x 003 protein (MDS003), mRNA. /FEA=mRNA /GEN=MDS003 /PROD=x 003 protein /DB_XREF=gi:9910421 /UG=Hs.3726 x 003 protein /FL=gb:AF168712.1 gb:NM_020232.1 </td> <td> NM_020232 </td> <td> proteasome (prosome, macropain) assembly chaperone 2 </td> <td> PSMG2 </td> <td> 56984 </td> <td> NM_020232 /// NM_147163 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043248 // proteasome assembly // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -52.55 </td> <td> 470.98 </td> <td> -1.81 </td> <td> 0.11 </td> <td> 0.16 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201842_s_at </td> <td> 201842_s_at </td> <td> AI826799 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI826799 /FEA=EST /DB_XREF=gi:5447470 /DB_XREF=est:wk56d07.x1 /CLONE=IMAGE:2419405 /UG=Hs.76224 EGF-containing fibulin-like extracellular matrix protein 1 /FL=gb:U03877.1 gb:NM_004105.2 </td> <td> AI826799 </td> <td> EGF containing fibulin-like extracellular matrix protein 1 </td> <td> EFEMP1 </td> <td> 2202 </td> <td> NM_001039348 /// NM_001039349 /// NM_004105 /// XM_005264205 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0007601 // visual perception // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030198 // extracellular matrix organization // traceable author statement /// 0032331 // negative regulation of chondrocyte differentiation // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005006 // epidermal growth factor-activated receptor activity // inferred from direct assay /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation </td> <td> -652.48 </td> <td> 4815.81 </td> <td> -1.81 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 203098_at </td> <td> 203098_at </td> <td> AL050164 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL050164.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586C1622 (from clone DKFZp586C1622); partial cds.  /FEA=mRNA /GEN=DKFZp586C1622 /PROD=hypothetical protein /DB_XREF=gi:4884378 /UG=Hs.16081 chromodomain protein, Y chromosome-like /FL=gb:AF081258.1 gb:AF081259.1 gb:NM_004824.1 </td> <td> AL050164 </td> <td> chromodomain protein, Y-like </td> <td> CDYL </td> <td> 9425 </td> <td> NM_001143970 /// NM_001143971 /// NM_004824 /// NM_170752 /// NR_026590 /// XM_006715272 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0035064 // methylated histone binding // inferred from direct assay </td> <td> 30.17 </td> <td> 126.01 </td> <td> 1.81 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201515_s_at </td> <td> 201515_s_at </td> <td> NM_004622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004622.1 /DEF=Homo sapiens translin (TSN), mRNA. /FEA=mRNA /GEN=TSN /PROD=translin /DB_XREF=gi:4759269 /UG=Hs.75066 translin /FL=gb:NM_004622.1 </td> <td> NM_004622 </td> <td> translin </td> <td> TSN </td> <td> 7247 </td> <td> NM_001261401 /// NM_004622 /// NR_048556 /// NR_048557 /// NR_048558 /// NR_048559 </td> <td> 0006310 // DNA recombination // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 96.05 </td> <td> 521.45 </td> <td> 1.81 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200080_s_at </td> <td> 200080_s_at </td> <td> AI955655 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI955655 /FEA=EST /DB_XREF=gi:5747965 /DB_XREF=est:wt36f03.x1 /CLONE=IMAGE:2509565 /UG=Hs.181307 H3 histone, family 3A </td> <td> AI955655 </td> <td> H3 histone, family 3A /// H3 histone, family 3A, pseudogene 4 /// H3 histone, family 3B (H3.3B) </td> <td> H3F3A /// H3F3AP4 /// H3F3B </td> <td> 3020 /// 3021 /// 440926 </td> <td> NM_002107 /// NM_005324 /// NR_002315 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype </td> <td> 0000228 // nuclear chromosome // inferred from direct assay /// 0000786 // nucleosome // inferred from electronic annotation /// 0000788 // nuclear nucleosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 292.12 </td> <td> 1351.89 </td> <td> 1.81 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 214924_s_at </td> <td> 214924_s_at </td> <td> AK000754 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK000754.1 /DEF=Homo sapiens cDNA FLJ20747 fis, clone HEP05884, highly similar to J03068 Human DNF1552.  /FEA=mRNA /DB_XREF=gi:7021038 /UG=Hs.6705 KIAA1042 protein </td> <td> AK000754 </td> <td> trafficking protein, kinesin binding 1 </td> <td> TRAK1 </td> <td> 22906 </td> <td> NM_001042646 /// NM_001265608 /// NM_001265609 /// NM_001265610 /// NM_014965 /// XM_005264956 /// XM_005264957 /// XM_005264958 /// XM_005264959 /// XM_005264960 /// XM_005264962 /// XM_005264963 /// XM_005264964 /// XM_006713028 /// XM_006713029 /// XM_006713030 /// XM_006713031 </td> <td> 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006493 // protein O-linked glycosylation // inferred from sequence or structural similarity /// 0006605 // protein targeting // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0050811 // GABA receptor binding // inferred from electronic annotation </td> <td> 30.95 </td> <td> 117.85 </td> <td> 1.81 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 218825_at </td> <td> 218825_at </td> <td> NM_016215 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016215.1 /DEF=Homo sapiens NEU1 protein (LOC51162), mRNA. /FEA=mRNA /GEN=LOC51162 /PROD=NEU1 protein /DB_XREF=gi:7705888 /UG=Hs.91481 NEU1 protein /FL=gb:AL512735.1 gb:AF186111.1 gb:NM_016215.1 </td> <td> NM_016215 </td> <td> EGF-like-domain, multiple 7 </td> <td> EGFL7 </td> <td> 51162 </td> <td> NM_016215 /// NM_201446 /// NR_045110 /// NR_045111 /// NR_046367 /// XM_006717138 /// XM_006717139 /// XM_006717140 /// XM_006717141 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005112 // Notch binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 51.75 </td> <td> 482.00 </td> <td> 1.81 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200016_x_at </td> <td> 200016_x_at </td> <td> NM_002136 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002136.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein A1 (HNRPA1), mRNA.  /FEA=mRNA /GEN=HNRPA1 /PROD=heterogeneous nuclear ribonucleoprotein A1 /DB_XREF=gi:4504444 /UG=Hs.249495 heterogeneous nuclear ribonucleoprotein A1 /FL=gb:NM_002136.1 </td> <td> NM_002136 </td> <td> heterogeneous nuclear ribonucleoprotein A1 /// heterogeneous nuclear ribonucleoprotein A1 pseudogene 10 </td> <td> HNRNPA1 /// HNRNPA1P10 </td> <td> 3178 /// 664709 </td> <td> NM_002136 /// NM_031157 /// NR_002944 /// XM_005268826 /// XR_245923 /// XR_245924 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006405 // RNA export from nucleus // inferred by curator /// 0006810 // transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051168 // nuclear export // inferred from direct assay /// 0051170 // nuclear import // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // traceable author statement /// 0003727 // single-stranded RNA binding // inferred by curator /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -380.83 </td> <td> 2825.64 </td> <td> -1.81 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 205612_at </td> <td> 205612_at </td> <td> NM_007351 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007351.1 /DEF=Homo sapiens multimerin (MMRN), mRNA. /FEA=mRNA /GEN=MMRN /PROD=multimerin /DB_XREF=gi:6681258 /UG=Hs.268107 multimerin /FL=gb:NM_007351.1 gb:U27109.1 </td> <td> NM_007351 </td> <td> multimerin 1 </td> <td> MMRN1 </td> <td> 22915 </td> <td> NM_007351 /// XM_005262856 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0031093 // platelet alpha granule lumen // traceable author statement </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 143.02 </td> <td> 427.89 </td> <td> 1.80 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 221434_s_at </td> <td> 221434_s_at </td> <td> NM_031210 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031210.1 /DEF=Homo sapiens hypothetical protein DC50 (DC50), mRNA. /FEA=CDS /GEN=DC50 /PROD=hypothetical protein DC50 /DB_XREF=gi:13654277 /FL=gb:NM_031210.1 </td> <td> NM_031210 </td> <td> SRA stem-loop interacting RNA binding protein </td> <td> SLIRP </td> <td> 81892 </td> <td> NM_001267863 /// NM_001267864 /// NM_031210 /// NR_052025 </td> <td> 0000961 // negative regulation of mitochondrial RNA catabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 85.83 </td> <td> 697.39 </td> <td> 1.80 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201314_at </td> <td> 201314_at </td> <td> NM_006374 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006374.1 /DEF=Homo sapiens serinethreonine kinase 25 (Ste20, yeast homolog) (STK25), mRNA.  /FEA=mRNA /GEN=STK25 /PROD=serinethreonine kinase 25 (Ste20, yeasthomolog) /DB_XREF=gi:5454173 /UG=Hs.155206 serinethreonine kinase 25 (Ste20, yeast homolog) /FL=gb:D63780.1 gb:NM_006374.1 </td> <td> NM_006374 </td> <td> serine/threonine kinase 25 </td> <td> STK25 </td> <td> 10494 </td> <td> NM_001271977 /// NM_001271978 /// NM_001271979 /// NM_001271980 /// NM_001282305 /// NM_001282306 /// NM_001282307 /// NM_001282308 /// NM_006374 /// XM_006712197 /// XM_006712198 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // not recorded /// 0006979 // response to oxidative stress // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // not recorded /// 0045595 // regulation of cell differentiation // not recorded /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0051645 // Golgi localization // inferred from direct assay </td> <td> 0005737 // cytoplasm // not recorded /// 0005794 // Golgi apparatus // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 28.45 </td> <td> 180.65 </td> <td> 1.80 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201295_s_at </td> <td> 201295_s_at </td> <td> BF111821 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF111821 /FEA=EST /DB_XREF=gi:10941511 /DB_XREF=est:7l36a06.x1 /CLONE=IMAGE:3523474 /UG=Hs.187991 DKFZP564A122 protein /FL=gb:AF106684.1 gb:NM_015626.1 </td> <td> BF111821 </td> <td> WD repeat and SOCS box containing 1 </td> <td> WSB1 </td> <td> 26118 </td> <td> NM_015626 /// NM_134264 /// NM_134265 /// XM_005257963 /// XR_243778 /// XR_429881 </td> <td> 0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation </td> <td> -34.15 </td> <td> 49.17 </td> <td> -1.80 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212202_s_at </td> <td> 212202_s_at </td> <td> BG493972 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG493972 /FEA=EST /DB_XREF=gi:13455486 /DB_XREF=est:602542252F1 /CLONE=IMAGE:4673316 /UG=Hs.16492 DKFZP564G2022 protein </td> <td> BG493972 </td> <td> transmembrane protein 87A </td> <td> TMEM87A </td> <td> 25963 </td> <td> NM_001110503 /// NM_001286487 /// NM_015497 /// XM_005254287 /// XM_006720468 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -30.02 </td> <td> 138.61 </td> <td> -1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212488_at </td> <td> 212488_at </td> <td> N30339 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N30339 /FEA=EST /DB_XREF=gi:1148859 /DB_XREF=est:yw75f06.s1 /CLONE=IMAGE:258083 /UG=Hs.146428 collagen, type V, alpha 1 </td> <td> N30339 </td> <td> collagen, type V, alpha 1 </td> <td> COL5A1 </td> <td> 1289 </td> <td> NM_000093 /// NM_001278074 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030199 // collagen fibril organization // inferred from mutant phenotype /// 0030199 // collagen fibril organization // non-traceable author statement /// 0030574 // collagen catabolic process // traceable author statement /// 0032964 // collagen biosynthetic process // inferred from mutant phenotype /// 0035313 // wound healing, spreading of epidermal cells // inferred from mutant phenotype /// 0035989 // tendon development // inferred from electronic annotation /// 0043206 // extracellular fibril organization // inferred from mutant phenotype /// 0043588 // skin development // inferred from mutant phenotype /// 0045112 // integrin biosynthetic process // inferred from mutant phenotype /// 0048592 // eye morphogenesis // inferred from mutant phenotype /// 0051128 // regulation of cellular component organization // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005588 // collagen type V trimer // inferred from mutant phenotype /// 0005604 // basement membrane // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from mutant phenotype /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005178 // integrin binding // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0043394 // proteoglycan binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048407 // platelet-derived growth factor binding // inferred from direct assay </td> <td> 72.47 </td> <td> 529.86 </td> <td> 1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 217491_x_at </td> <td> 217491_x_at </td> <td> AF042165 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF042165 /DEF=Homo sapiens cytochrome c oxidase subunit VIIc (COX7CP1) pseudogene, complete sequence /FEA=CDS /DB_XREF=gi:3861486 /UG=Hs.278494 cytochrome c oxidase subunit VIIc pseudogene 1 </td> <td> AF042165 </td> <td> cytochrome c oxidase subunit VIIc </td> <td> COX7C </td> <td> 1350 </td> <td> NM_001867 </td> <td> 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation </td> <td> 167.67 </td> <td> 906.49 </td> <td> 1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201049_s_at </td> <td> 201049_s_at </td> <td> NM_022551 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022551.1 /DEF=Homo sapiens ribosomal protein S18 (RPS18), mRNA. /FEA=mRNA /GEN=RPS18 /PROD=ribosomal protein S18 /DB_XREF=gi:11968181 /UG=Hs.275865 ribosomal protein S18 /FL=gb:NM_022551.1 </td> <td> NM_022551 </td> <td> ribosomal protein S18 </td> <td> RPS18 </td> <td> 6222 </td> <td> NM_022551 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // not recorded /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042254 // ribosome biogenesis // not recorded /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005581 // collagen trimer // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0015935 // small ribosomal subunit // not recorded /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -773.10 </td> <td> 4482.68 </td> <td> -1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 202671_s_at </td> <td> 202671_s_at </td> <td> NM_003681 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003681.1 /DEF=Homo sapiens pyridoxal (pyridoxine, vitamin B6) kinase (PDXK), mRNA.  /FEA=mRNA /GEN=PDXK /PROD=pyridoxal kinase /DB_XREF=gi:4505700 /UG=Hs.38041 pyridoxal (pyridoxine, vitamin B6) kinase /FL=gb:BC000123.1 gb:U89606.1 gb:NM_003681.1 </td> <td> NM_003681 </td> <td> pyridoxal (pyridoxine, vitamin B6) kinase </td> <td> PDXK </td> <td> 8566 </td> <td> NM_003681 /// NM_021941 /// XM_005261195 /// XM_005261196 /// XM_005261198 /// XM_005261199 </td> <td> 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0008283 // cell proliferation // inferred from direct assay /// 0009443 // pyridoxal 5'-phosphate salvage // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042816 // vitamin B6 metabolic process // inferred by curator /// 0042816 // vitamin B6 metabolic process // traceable author statement /// 0042823 // pyridoxal phosphate biosynthetic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008478 // pyridoxal kinase activity // inferred from direct assay /// 0008478 // pyridoxal kinase activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030955 // potassium ion binding // inferred from direct assay /// 0031402 // sodium ion binding // inferred from direct assay /// 0031403 // lithium ion binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -27.78 </td> <td> 112.21 </td> <td> -1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200705_s_at </td> <td> 200705_s_at </td> <td> NM_001959 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001959.1 /DEF=Homo sapiens eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA.  /FEA=mRNA /GEN=EEF1B2 /PROD=eukaryotic translation elongation factor 1 beta2 /DB_XREF=gi:4503476 /UG=Hs.275959 eukaryotic translation elongation factor 1 beta 2 /FL=gb:BC004931.1 gb:NM_001959.1 </td> <td> NM_001959 </td> <td> eukaryotic translation elongation factor 1 beta 2 /// small nucleolar RNA, H/ACA box 41 </td> <td> EEF1B2 /// SNORA41 </td> <td> 1933 /// 619569 </td> <td> NM_001037663 /// NM_001959 /// NM_021121 /// NR_002590 </td> <td> 0006412 // translation // traceable author statement /// 0006414 // translational elongation // non-traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005853 // eukaryotic translation elongation factor 1 complex // non-traceable author statement </td> <td> 0003746 // translation elongation factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -137.55 </td> <td> 1796.40 </td> <td> -1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 203980_at </td> <td> 203980_at </td> <td> NM_001442 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001442.1 /DEF=Homo sapiens fatty acid binding protein 4, adipocyte (FABP4), mRNA. /FEA=mRNA /GEN=FABP4 /PROD=fatty acid binding protein 4, adipocyte /DB_XREF=gi:4557578 /UG=Hs.83213 fatty acid binding protein 4, adipocyte /FL=gb:BC003672.1 gb:J02874.1 gb:NM_001442.1 </td> <td> NM_001442 </td> <td> fatty acid binding protein 4, adipocyte </td> <td> FABP4 </td> <td> 2167 </td> <td> NM_001442 </td> <td> 0001816 // cytokine production // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0071285 // cellular response to lithium ion // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005811 // lipid particle // traceable author statement </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005504 // fatty acid binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation </td> <td> -61.52 </td> <td> 289.91 </td> <td> -1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 214988_s_at </td> <td> 214988_s_at </td> <td> X63071 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X63071.1 /DEF=H.sapiens mRNA for novel DNA binding protein. /FEA=mRNA /GEN=DBP-5 /PROD=DBP-5 protein /DB_XREF=gi:30487 /UG=Hs.92909 SON DNA binding protein </td> <td> X63071 </td> <td> SON DNA binding protein </td> <td> SON </td> <td> 6651 </td> <td> NM_001291411 /// NM_001291412 /// NM_003103 /// NM_032195 /// NM_138925 /// NM_138927 /// NR_103796 /// NR_103797 /// NR_103798 /// XM_006724043 /// XM_006724044 /// XM_006724045 /// XR_430355 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0006397 // mRNA processing // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050733 // RS domain binding // inferred from electronic annotation </td> <td> 68.27 </td> <td> 513.11 </td> <td> 1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 204031_s_at </td> <td> 204031_s_at </td> <td> NM_005016 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005016.1 /DEF=Homo sapiens poly(rC)-binding protein 2 (PCBP2), mRNA. /FEA=mRNA /GEN=PCBP2 /PROD=poly(rC)-binding protein 2 /DB_XREF=gi:4826885 /UG=Hs.63525 poly(rC)-binding protein 2 /FL=gb:BC001155.1 gb:NM_005016.1 </td> <td> NM_005016 </td> <td> poly(rC) binding protein 2 </td> <td> PCBP2 </td> <td> 5094 </td> <td> NM_001098620 /// NM_001128911 /// NM_001128912 /// NM_001128913 /// NM_001128914 /// NM_005016 /// NM_031989 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016071 // mRNA metabolic process // non-traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0050687 // negative regulation of defense response to virus // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -275.88 </td> <td> 1508.44 </td> <td> -1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 204092_s_at </td> <td> 204092_s_at </td> <td> NM_003600 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003600.1 /DEF=Homo sapiens serinethreonine kinase 15 (STK15), mRNA. /FEA=mRNA /GEN=STK15 /PROD=serinethreonine kinase 15 /DB_XREF=gi:4507274 /UG=Hs.48915 serinethreonine kinase 15 /FL=gb:AF008551.1 gb:AF011468.1 gb:NM_003600.1 </td> <td> NM_003600 </td> <td> aurora kinase A </td> <td> AURKA </td> <td> 6790 </td> <td> NM_003600 /// NM_198433 /// NM_198434 /// NM_198435 /// NM_198436 /// NM_198437 /// XM_005260534 /// XM_006723871 /// XM_006723872 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007049 // cell cycle // non-traceable author statement /// 0007051 // spindle organization // non-traceable author statement /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0043146 // spindle stabilization // inferred from mutant phenotype /// 0045840 // positive regulation of mitosis // traceable author statement /// 0046605 // regulation of centrosome cycle // traceable author statement /// 0046777 // protein autophosphorylation // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0030496 // midbody // traceable author statement /// 0031616 // spindle pole centrosome // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004712 // protein serine/threonine/tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation </td> <td> 24.75 </td> <td> 197.25 </td> <td> 1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200043_at </td> <td> 200043_at </td> <td> NM_004450 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004450.1 /DEF=Homo sapiens enhancer of rudimentary (Drosophila) homolog (ERH), mRNA.  /FEA=mRNA /GEN=ERH /PROD=enhancer of rudimentary (Drosophila) homolog /DB_XREF=gi:4758301 /UG=Hs.118757 enhancer of rudimentary (Drosophila) homolog /FL=gb:D85758.1 gb:U66871.1 gb:NM_004450.1 </td> <td> NM_004450 </td> <td> enhancer of rudimentary homolog (Drosophila) </td> <td> ERH </td> <td> 2079 </td> <td> NM_004450 </td> <td> 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006213 // pyrimidine nucleoside metabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation </td> <td> 0030496 // midbody // inferred from direct assay </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 262.17 </td> <td> 1427.51 </td> <td> 1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 209104_s_at </td> <td> 209104_s_at </td> <td> BC000009 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000009.1 /DEF=Homo sapiens, likely homolog of yeast Nhp2, component of the HACA snoRNP; hypothetical protein FLJ20479, clone MGC:1038, mRNA, complete cds.  /FEA=mRNA /PROD=likely homolog of yeast Nhp2, component of theHACA snoRNP; hypothetical protein FLJ20479 /DB_XREF=gi:12652540 /UG=Hs.23990 nucleolar protein family A, member 2 (HACA small nucleolar RNPs) /FL=gb:BC000009.1 gb:NM_017838.1 </td> <td> BC000009 </td> <td> NHP2 ribonucleoprotein </td> <td> NHP2 </td> <td> 55651 </td> <td> NM_001034833 /// NM_017838 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation /// 0031118 // rRNA pseudouridine synthesis // inferred from sequence or structural similarity /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005732 // small nucleolar ribonucleoprotein complex // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0030515 // snoRNA binding // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 74.48 </td> <td> 539.56 </td> <td> 1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 205512_s_at </td> <td> 205512_s_at </td> <td> NM_004208 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004208.1 /DEF=Homo sapiens programmed cell death 8 (apoptosis-inducing factor) (PDCD8), mRNA.  /FEA=mRNA /GEN=PDCD8 /PROD=programmed cell death 8 (apoptosis-inducingfactor) /DB_XREF=gi:4757731 /UG=Hs.18720 programmed cell death 8 (apoptosis-inducing factor) /FL=gb:AF100928.1 gb:NM_004208.1 </td> <td> NM_004208 </td> <td> apoptosis-inducing factor, mitochondrion-associated, 1 </td> <td> AIFM1 </td> <td> 9131 </td> <td> NM_001130846 /// NM_001130847 /// NM_004208 /// NM_145812 /// NM_145813 </td> <td> 0006308 // DNA catabolic process // traceable author statement /// 0006309 // apoptotic DNA fragmentation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from direct assay /// 0030261 // chromosome condensation // traceable author statement /// 0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from mutant phenotype /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // traceable author statement /// 0016174 // NAD(P)H oxidase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016651 // oxidoreductase activity, acting on NAD(P)H // inferred from direct assay /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation </td> <td> 35.80 </td> <td> 111.90 </td> <td> 1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 218773_s_at </td> <td> 218773_s_at </td> <td> NM_012228 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012228.1 /DEF=Homo sapiens pilin-like transcription factor (PILB), mRNA. /FEA=mRNA /GEN=PILB /PROD=pilin-like transcription factor /DB_XREF=gi:6912591 /UG=Hs.279754 pilin-like transcription factor /FL=gb:AF122004.1 gb:NM_012228.1 </td> <td> NM_012228 </td> <td> methionine sulfoxide reductase B2 </td> <td> MSRB2 </td> <td> 22921 </td> <td> NM_012228 </td> <td> 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from sequence or structural similarity /// 0030091 // protein repair // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from sequence or structural similarity </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003779 // actin binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016671 // oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor // inferred from electronic annotation /// 0033743 // peptide-methionine (R)-S-oxide reductase activity // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 27.65 </td> <td> 176.40 </td> <td> 1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 219549_s_at </td> <td> 219549_s_at </td> <td> NM_006054 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006054.1 /DEF=Homo sapiens reticulon 3 (RTN3), mRNA. /FEA=mRNA /GEN=RTN3 /PROD=reticulon 3 /DB_XREF=gi:5174654 /UG=Hs.252831 reticulon 3 /FL=gb:BC000634.1 gb:AF059524.1 gb:AF119297.1 gb:NM_006054.1 </td> <td> NM_006054 </td> <td> reticulon 3 </td> <td> RTN3 </td> <td> 10313 </td> <td> NM_001265589 /// NM_001265590 /// NM_001265591 /// NM_006054 /// NM_201428 /// NM_201429 /// NM_201430 /// NR_049750 /// NR_049751 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0071786 // endoplasmic reticulum tubular network organization // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017147 // Wnt-protein binding // inferred from physical interaction </td> <td> 47.93 </td> <td> 304.91 </td> <td> 1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200717_x_at </td> <td> 200717_x_at </td> <td> NM_000971 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000971.1 /DEF=Homo sapiens ribosomal protein L7 (RPL7), mRNA. /FEA=mRNA /GEN=RPL7 /PROD=ribosomal protein L7 /DB_XREF=gi:4506658 /UG=Hs.153 ribosomal protein L7 /FL=gb:L16558.1 gb:NM_000971.1 </td> <td> NM_000971 </td> <td> ribosomal protein L7 </td> <td> RPL7 </td> <td> 6129 </td> <td> NM_000971 /// XM_006716463 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042273 // ribosomal large subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003723 // RNA binding // traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -467.85 </td> <td> 4551.50 </td> <td> -1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 218388_at </td> <td> 218388_at </td> <td> NM_012088 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012088.1 /DEF=Homo sapiens 6-phosphogluconolactonase (PGLS), mRNA. /FEA=mRNA /GEN=PGLS /PROD=6-phosphogluconolactonase /DB_XREF=gi:6912585 /UG=Hs.100071 6-phosphogluconolactonase /FL=gb:NM_012088.1 </td> <td> NM_012088 </td> <td> 6-phosphogluconolactonase </td> <td> PGLS </td> <td> 25796 </td> <td> NM_012088 /// XM_005259849 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006098 // pentose-phosphate shunt // inferred from direct assay /// 0006098 // pentose-phosphate shunt // traceable author statement /// 0009051 // pentose-phosphate shunt, oxidative branch // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0016787 // hydrolase activity // inferred from electronic annotation /// 0017057 // 6-phosphogluconolactonase activity // inferred from direct assay /// 0048029 // monosaccharide binding // inferred from electronic annotation </td> <td> -41.87 </td> <td> 137.41 </td> <td> -1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 209653_at </td> <td> 209653_at </td> <td> U93240 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U93240.1 /DEF=Human importin alpha 3 mRNA, complete cds. /FEA=mRNA /PROD=importin alpha 3 /DB_XREF=gi:1928974 /UG=Hs.302499 karyopherin alpha 4 (importin alpha 3) /FL=gb:AB002533.2 gb:NM_002268.2 gb:U93240.1 </td> <td> U93240 </td> <td> karyopherin alpha 4 (importin alpha 3) </td> <td> KPNA4 </td> <td> 3840 </td> <td> NM_002268 </td> <td> 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> -28.90 </td> <td> 158.88 </td> <td> -1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208886_at </td> <td> 208886_at </td> <td> BC000145 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000145.1 /DEF=Homo sapiens, H1 histone family, member 0, clone MGC:5241, mRNA, complete cds.  /FEA=mRNA /PROD=H1 histone family, member 0 /DB_XREF=gi:12652786 /UG=Hs.226117 H1 histone family, member 0 /FL=gb:BC000145.1 gb:NM_005318.1 </td> <td> BC000145 </td> <td> H1 histone family, member 0 </td> <td> H1F0 </td> <td> 3005 </td> <td> NM_005318 </td> <td> 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0009451 // RNA modification // inferred from electronic annotation </td> <td> 0000786 // nucleosome // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031490 // chromatin DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 37.68 </td> <td> 180.39 </td> <td> 1.79 </td> <td> 0.11 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 215434_x_at </td> <td> 215434_x_at </td> <td> AV684285 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV684285 /FEA=EST /DB_XREF=gi:10286148 /DB_XREF=est:AV684285 /CLONE=GKCENE06 /UG=Hs.323463 KIAA1693 protein; hypothetical protein FLJ20719 </td> <td> AV684285 </td> <td> neuroblastoma breakpoint family member 1-like /// neuroblastoma breakpoint family, member 1 /// neuroblastoma breakpoint family, member 10 /// neuroblastoma breakpoint family, member 11 /// neuroblastoma breakpoint family, member 14 /// neuroblastoma breakpoint family, member 15 /// neuroblastoma breakpoint family, member 19 /// neuroblastoma breakpoint family, member 26 </td> <td> LOC102724250 /// NBPF1 /// NBPF10 /// NBPF11 /// NBPF14 /// NBPF15 /// NBPF19 /// NBPF26 </td> <td> 25832 /// 55672 /// 200030 /// 284565 /// 100132406 /// 101060226 /// 101060684 /// 102724250 </td> <td> NM_001039703 /// NM_001101663 /// NM_001102663 /// NM_001170755 /// NM_015383 /// NM_017940 /// NM_173638 /// NM_183372 /// NR_046188 /// NR_110864 /// XM_003960069 /// XM_003960230 /// XM_005245096 /// XM_005245097 /// XM_005276139 /// XM_005276140 /// XM_005276167 /// XM_005276168 /// XM_005276169 /// XM_005276170 /// XM_005276171 /// XM_005276172 /// XM_005276173 /// XM_005276174 /// XM_005276175 /// XM_005276176 /// XM_005276177 /// XM_005276178 /// XM_005276179 /// XM_005276180 /// XM_005276181 /// XM_005276182 /// XM_005276183 /// XM_005276184 /// XM_005276185 /// XM_005276186 /// XM_005276187 /// XM_005277469 /// XM_005277470 /// XM_005277471 /// XM_005277472 /// XM_005277473 /// XM_005277474 /// XM_005277475 /// XM_005277476 /// XM_005277477 /// XM_005277478 /// XM_005277479 /// XM_005277480 /// XM_005277481 /// XM_005277482 /// XM_005277483 /// XM_005277484 /// XM_005277485 /// XM_005277486 /// XM_005277487 /// XM_005277488 /// XM_005277503 /// XM_005277504 /// XM_005277505 /// XM_006710234 /// XM_006711091 /// XM_006711092 /// XM_006711093 /// XM_006711094 /// XM_006711095 /// XM_006711096 /// XM_006711197 /// XM_006711265 /// XM_006711707 /// XM_006711708 /// XM_006711709 /// XM_006711710 /// XM_006711711 /// XM_006711712 /// XM_006724882 /// XM_006724883 /// XM_006724884 /// XM_006724885 /// XM_006724886 /// XM_006724887 /// XM_006724888 /// XM_006724889 /// XM_006724890 /// XM_006724891 /// XM_006724892 /// XM_006724893 /// XM_006724894 /// XM_006726340 /// XM_006726341 /// XM_006726342 /// XM_006726343 /// XM_006726344 /// XM_006726345 /// XM_006726360 /// XM_006726361 /// XM_006726362 /// XM_006726363 /// XM_006726364 /// XM_006726365 /// XR_426769 /// XR_430573 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -116.27 </td> <td> 259.16 </td> <td> -1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208683_at </td> <td> 208683_at </td> <td> M23254 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M23254.1 /DEF=Human Ca2-activated neutral protease large subunit (CANP) mRNA, complete cds.  /FEA=mRNA /GEN=CANP /PROD=neutral protease large subunit /DB_XREF=gi:511636 /UG=Hs.76288 calpain 2, (mII) large subunit /FL=gb:NM_001748.3 gb:M23254.1 gb:AF261089.1 </td> <td> M23254 </td> <td> calpain 2, (m/II) large subunit </td> <td> CAPN2 </td> <td> 824 </td> <td> NM_001146068 /// NM_001748 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0001824 // blastocyst development // inferred from electronic annotation /// 0006508 // proteolysis // not recorded /// 0006508 // proteolysis // inferred from sequence or structural similarity /// 0007520 // myoblast fusion // inferred from electronic annotation /// 0016540 // protein autoprocessing // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred by curator /// 0071230 // cellular response to amino acid stimulus // inferred from sequence or structural similarity </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030864 // cortical actin cytoskeleton // traceable author statement /// 0031143 // pseudopodium // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097038 // perinuclear endoplasmic reticulum // inferred from direct assay </td> <td> 0004198 // calcium-dependent cysteine-type endopeptidase activity // not recorded /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 207.62 </td> <td> 1645.46 </td> <td> 1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 221427_s_at </td> <td> 221427_s_at </td> <td> NM_030937 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030937.1 /DEF=Homo sapiens hypothetical protein hCLA-iso (HCLA-ISO), mRNA. /FEA=CDS /GEN=HCLA-ISO /PROD=hypothetical protein hCLA-iso /DB_XREF=gi:13569904 /FL=gb:NM_030937.1 </td> <td> NM_030937 </td> <td> cyclin L2 </td> <td> CCNL2 </td> <td> 81669 </td> <td> NM_001039577 /// NM_001144867 /// NM_001144868 /// NM_030937 /// XM_005244803 /// XM_006710931 /// XM_006710932 /// XM_006710933 /// XM_006710934 /// XR_241043 /// XR_426629 /// XR_426630 /// XR_426631 /// XR_426632 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation </td> <td> -24.83 </td> <td> 101.94 </td> <td> -1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 204093_at </td> <td> 204093_at </td> <td> NM_001239 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001239.1 /DEF=Homo sapiens cyclin H (CCNH), mRNA. /FEA=mRNA /GEN=CCNH /PROD=cyclin H /DB_XREF=gi:4502622 /UG=Hs.514 cyclin H /FL=gb:BC005280.1 gb:NM_001239.1 gb:U12685.1 gb:U11791.1 </td> <td> NM_001239 </td> <td> cyclin H </td> <td> CCNH </td> <td> 902 </td> <td> NM_001199189 /// NM_001239 /// XM_005248627 /// XM_005248629 /// XR_427721 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006362 // transcription elongation from RNA polymerase I promoter // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050434 // positive regulation of viral transcription // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005675 // holo TFIIH complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from electronic annotation /// 0019907 // cyclin-dependent protein kinase activating kinase holoenzyme complex // inferred from direct assay /// 0070985 // TFIIK complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016538 // cyclin-dependent protein serine/threonine kinase regulator activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation </td> <td> 34.20 </td> <td> 266.68 </td> <td> 1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 211939_x_at </td> <td> 211939_x_at </td> <td> X74070 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X74070.1 /DEF=H.sapiens mRNA for transcription factor BTF 3. /FEA=mRNA /PROD=transcription factor BTF3 /DB_XREF=gi:395086 /UG=Hs.101025 basic transcription factor 3 </td> <td> X74070 </td> <td> basic transcription factor 3 </td> <td> BTF3 </td> <td> 689 </td> <td> NM_001037637 /// NM_001207 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -131.97 </td> <td> 2182.46 </td> <td> -1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 218438_s_at </td> <td> 218438_s_at </td> <td> NM_025205 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025205.1 /DEF=Homo sapiens hypothetical protein DKFZp434N185 (DKFZP434N185), mRNA.  /FEA=mRNA /GEN=DKFZP434N185 /PROD=hypothetical protein DKFZp434N185 /DB_XREF=gi:13376801 /UG=Hs.33032 hypothetical protein DKFZp434N185 /FL=gb:AF317680.1 gb:NM_025205.1 </td> <td> NM_025205 </td> <td> mediator complex subunit 28 </td> <td> MED28 </td> <td> 80306 </td> <td> NM_025205 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016592 // mediator complex // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 29.45 </td> <td> 160.68 </td> <td> 1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212610_at </td> <td> 212610_at </td> <td> U79291 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U79291.1 /DEF=Human clone 23721 mRNA sequence. /FEA=mRNA /DB_XREF=gi:1710271 /UG=Hs.83572 Human clone 23721 mRNA sequence </td> <td> U79291 </td> <td> protein tyrosine phosphatase, non-receptor type 11 </td> <td> PTPN11 </td> <td> 5781 </td> <td> NM_002834 /// NM_080601 /// XM_006719526 /// XM_006719527 </td> <td> 0000077 // DNA damage checkpoint // inferred from electronic annotation /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from mutant phenotype /// 0007507 // heart development // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009755 // hormone-mediated signaling pathway // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from mutant phenotype /// 0035265 // organ growth // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from mutant phenotype /// 0036302 // atrioventricular canal development // inferred from mutant phenotype /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038127 // ERBB signaling pathway // inferred from direct assay /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0046825 // regulation of protein export from nucleus // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0046888 // negative regulation of hormone secretion // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048609 // multicellular organismal reproductive process // inferred from electronic annotation /// 0048806 // genitalia development // inferred from mutant phenotype /// 0048839 // inner ear development // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0051463 // negative regulation of cortisol secretion // inferred from electronic annotation /// 0060125 // negative regulation of growth hormone secretion // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from mutant phenotype /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement /// 2001275 // positive regulation of glucose import in response to insulin stimulus // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // inferred from mutant phenotype /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // traceable author statement /// 0005070 // SH3/SH2 adaptor activity // inferred from direct assay /// 0005158 // insulin receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation /// 0031748 // D1 dopamine receptor binding // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation /// 0051428 // peptide hormone receptor binding // inferred from electronic annotation </td> <td> 33.10 </td> <td> 449.27 </td> <td> 1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 211546_x_at </td> <td> 211546_x_at </td> <td> L36674 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L36674.1 /DEF=Human (clone 2-5) synuclein (NACP) mRNA, complete cds. /FEA=mRNA /GEN=NACP /PROD=synuclein /DB_XREF=gi:556211 /UG=Hs.76930 synuclein, alpha (non A4 component of amyloid precursor) /FL=gb:L36674.1 </td> <td> L36674 </td> <td> synuclein, alpha (non A4 component of amyloid precursor) </td> <td> SNCA </td> <td> 6622 </td> <td> NM_000345 /// NM_001146054 /// NM_001146055 /// NM_007308 </td> <td> 0001774 // microglial cell activation // inferred from electronic annotation /// 0001921 // positive regulation of receptor recycling // inferred from direct assay /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001956 // positive regulation of neurotransmitter secretion // inferred from electronic annotation /// 0001963 // synaptic transmission, dopaminergic // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006638 // neutral lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007006 // mitochondrial membrane organization // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0010040 // response to iron(II) ion // inferred from direct assay /// 0010517 // regulation of phospholipase activity // inferred from direct assay /// 0010642 // negative regulation of platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0014048 // regulation of glutamate secretion // inferred from electronic annotation /// 0014059 // regulation of dopamine secretion // traceable author statement /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0031623 // receptor internalization // inferred from direct assay /// 0031648 // protein destabilization // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from direct assay /// 0032410 // negative regulation of transporter activity // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032769 // negative regulation of monooxygenase activity // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from direct assay /// 0034599 // cellular response to oxidative stress // inferred from electronic annotation /// 0035067 // negative regulation of histone acetylation // inferred from direct assay /// 0040012 // regulation of locomotion // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042416 // dopamine biosynthetic process // traceable author statement /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042775 // mitochondrial ATP synthesis coupled electron transport // inferred from electronic annotation /// 0043030 // regulation of macrophage activation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043206 // extracellular fibril organization // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from direct assay /// 0045920 // negative regulation of exocytosis // inferred from mutant phenotype /// 0045963 // negative regulation of dopamine metabolic process // inferred from electronic annotation /// 0046928 // regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048148 // behavioral response to cocaine // inferred from electronic annotation /// 0048168 // regulation of neuronal synaptic plasticity // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048488 // synaptic vesicle endocytosis // inferred from sequence or structural similarity /// 0048489 // synaptic vesicle transport // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0050812 // regulation of acyl-CoA biosynthetic process // inferred from electronic annotation /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051583 // dopamine uptake involved in synaptic transmission // traceable author statement /// 0051585 // negative regulation of dopamine uptake involved in synaptic transmission // inferred from direct assay /// 0051612 // negative regulation of serotonin uptake // inferred from direct assay /// 0051622 // negative regulation of norepinephrine uptake // inferred from direct assay /// 0055074 // calcium ion homeostasis // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0060732 // positive regulation of inositol phosphate biosynthetic process // inferred from direct assay /// 0070495 // negative regulation of thrombin receptor signaling pathway // inferred from direct assay /// 0070555 // response to interleukin-1 // inferred from direct assay /// 0071280 // cellular response to copper ion // inferred from direct assay /// 0071872 // cellular response to epinephrine stimulus // traceable author statement /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 1901214 // regulation of neuron death // inferred from genetic interaction </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016234 // inclusion body // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030426 // growth cone // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // inferred from direct assay /// 0043195 // terminal bouton // inferred from electronic annotation /// 0043205 // fibril // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0005504 // fatty acid binding // inferred from direct assay /// 0005507 // copper ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008198 // ferrous iron binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0019894 // kinesin binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0043014 // alpha-tubulin binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0045502 // dynein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0050544 // arachidonic acid binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from direct assay /// 0060961 // phospholipase D inhibitor activity // inferred from direct assay </td> <td> 26.07 </td> <td> 134.44 </td> <td> 1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208759_at </td> <td> 208759_at </td> <td> AF240468 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF240468.1 /DEF=Homo sapiens nicastrin mRNA, complete cds. /FEA=mRNA /PROD=nicastrin /DB_XREF=gi:9992877 /UG=Hs.4788 nicastrin /FL=gb:AF240468.1 </td> <td> AF240468 </td> <td> nicastrin </td> <td> NCSTN </td> <td> 23385 </td> <td> NM_001290184 /// NM_001290186 /// NM_015331 /// XM_005245053 </td> <td> 0002262 // myeloid cell homeostasis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006509 // membrane protein ectodomain proteolysis // inferred from sequence or structural similarity /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0016485 // protein processing // inferred from sequence or structural similarity /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042987 // amyloid precursor protein catabolic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from sequence or structural similarity /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050435 // beta-amyloid metabolic process // inferred from electronic annotation /// 0050673 // epithelial cell proliferation // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation </td> <td> -38.02 </td> <td> 179.71 </td> <td> -1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 203594_at </td> <td> 203594_at </td> <td> NM_003729 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003729.1 /DEF=Homo sapiens RNA 3-terminal phosphate cyclase (RPC), mRNA. /FEA=mRNA /GEN=RPC /PROD=RNA 3-terminal phosphate cyclase /DB_XREF=gi:4506588 /UG=Hs.27076 RNA 3-terminal phosphate cyclase /FL=gb:NM_003729.1 </td> <td> NM_003729 </td> <td> RNA 3'-terminal phosphate cyclase </td> <td> RTCA </td> <td> 8634 </td> <td> NM_001130841 /// NM_003729 /// XM_005271298 /// XM_005271299 </td> <td> 0006396 // RNA processing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003963 // RNA-3'-phosphate cyclase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -34.02 </td> <td> 267.84 </td> <td> -1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 214257_s_at </td> <td> 214257_s_at </td> <td> AA890010 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA890010 /FEA=EST /DB_XREF=gi:3016889 /DB_XREF=est:aj89h08.s1 /CLONE=IMAGE:1403679 /UG=Hs.50785 SEC22, vesicle trafficking protein (S. cerevisiae)-like 1 </td> <td> AA890010 </td> <td> SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene) </td> <td> SEC22B </td> <td> 9554 </td> <td> NM_004892 </td> <td> 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 77.42 </td> <td> 285.46 </td> <td> 1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200090_at </td> <td> 200090_at </td> <td> BG168896 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG168896 /FEA=EST /DB_XREF=gi:12675599 /DB_XREF=est:602320235F1 /CLONE=IMAGE:4415240 /UG=Hs.138381 farnesyltransferase, CAAX box, alpha </td> <td> BG168896 </td> <td> farnesyltransferase, CAAX box, alpha </td> <td> FNTA </td> <td> 2339 </td> <td> NM_001018676 /// NM_001018677 /// NM_002027 /// NR_033698 </td> <td> 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0018342 // protein prenylation // inferred from electronic annotation /// 0018343 // protein farnesylation // inferred from direct assay /// 0018344 // protein geranylgeranylation // inferred from direct assay /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0090044 // positive regulation of tubulin deacetylation // inferred from direct assay /// 0090045 // positive regulation of deacetylase activity // inferred from direct assay </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005875 // microtubule associated complex // inferred from direct assay /// 0005953 // CAAX-protein geranylgeranyltransferase complex // inferred from direct assay /// 0005965 // protein farnesyltransferase complex // inferred from direct assay </td> <td> 0004659 // prenyltransferase activity // inferred from electronic annotation /// 0004660 // protein farnesyltransferase activity // inferred from direct assay /// 0004661 // protein geranylgeranyltransferase activity // inferred from direct assay /// 0004662 // CAAX-protein geranylgeranyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008318 // protein prenyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from direct assay </td> <td> -54.03 </td> <td> 647.31 </td> <td> -1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 209404_s_at </td> <td> 209404_s_at </td> <td> AF151867 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF151867.1 /DEF=Homo sapiens CGI-109 protein mRNA, complete cds. /FEA=mRNA /PROD=CGI-109 protein /DB_XREF=gi:4929686 /UG=Hs.278391 CGI-109 protein /FL=gb:AF151867.1 </td> <td> AF151867 </td> <td> transmembrane emp24 protein transport domain containing 7 /// TMED7-TICAM2 readthrough </td> <td> TMED7 /// TMED7-TICAM2 </td> <td> 51014 /// 100302736 </td> <td> NM_001164468 /// NM_001164469 /// NM_181836 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034144 // negative regulation of toll-like receptor 4 signaling pathway // inferred from direct assay /// 0034145 // positive regulation of toll-like receptor 4 signaling pathway // inferred from direct assay /// 0034145 // positive regulation of toll-like receptor 4 signaling pathway // inferred from mutant phenotype /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035669 // TRAM-dependent toll-like receptor 4 signaling pathway // inferred from direct assay /// 0035669 // TRAM-dependent toll-like receptor 4 signaling pathway // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 0071650 // negative regulation of chemokine (C-C motif) ligand 5 production // inferred from mutant phenotype /// 0071651 // positive regulation of chemokine (C-C motif) ligand 5 production // inferred from mutant phenotype /// 2000494 // positive regulation of interleukin-18-mediated signaling pathway // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030126 // COPI vesicle coat // traceable author statement /// 0030127 // COPII vesicle coat // traceable author statement /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype </td> <td> 35.37 </td> <td> 136.99 </td> <td> 1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 209890_at </td> <td> 209890_at </td> <td> AF065389 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF065389.1 /DEF=Homo sapiens tetraspan NET-4 mRNA, complete cds. /FEA=mRNA /PROD=tetraspan NET-4 /DB_XREF=gi:3152702 /UG=Hs.20709 tetraspan 5 /FL=gb:AF065389.1 gb:NM_005723.1 </td> <td> AF065389 </td> <td> tetraspanin 5 </td> <td> TSPAN5 </td> <td> 10098 </td> <td> NM_005723 /// XM_005262680 /// XR_244617 </td> <td> 0045747 // positive regulation of Notch signaling pathway // inferred from mutant phenotype /// 0051604 // protein maturation // inferred from mutant phenotype /// 0090002 // establishment of protein localization to plasma membrane // inferred from mutant phenotype </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0019899 // enzyme binding // inferred from physical interaction </td> <td> 25.00 </td> <td> 88.25 </td> <td> 1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 214684_at </td> <td> 214684_at </td> <td> X63381 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X63381.1 /DEF=Homo sapiens mRNA for serum response factor-related protein, RSRFC4.  /FEA=mRNA /GEN=RSRFC4 /PROD=serum response factor-related protein /DB_XREF=gi:432655 /UG=Hs.182280 MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A) </td> <td> X63381 </td> <td> myocyte enhancer factor 2A </td> <td> MEF2A </td> <td> 4205 </td> <td> NM_001130926 /// NM_001130927 /// NM_001130928 /// NM_001171894 /// NM_005587 /// XM_005254914 /// XM_005254915 /// XM_005254916 /// XM_006720509 /// XM_006720510 /// XM_006720511 /// XM_006720512 /// XM_006720513 /// XM_006720514 /// XM_006720515 /// XM_006720516 /// XM_006720517 /// XM_006720518 /// XM_006720519 /// XM_006720520 /// XM_006720521 </td> <td> 0000002 // mitochondrial genome maintenance // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000165 // MAPK cascade // inferred from direct assay /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002467 // germinal center formation // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003138 // primary heart field specification // inferred from electronic annotation /// 0003139 // secondary heart field specification // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003185 // sinoatrial valve morphogenesis // inferred from electronic annotation /// 0003211 // cardiac ventricle formation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007517 // muscle organ development // non-traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007521 // muscle cell fate determination // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010694 // positive regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0014033 // neural crest cell differentiation // inferred from electronic annotation /// 0014898 // cardiac muscle hypertrophy in response to stress // inferred from electronic annotation /// 0021542 // dentate gyrus development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030220 // platelet formation // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035051 // cardiocyte differentiation // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation /// 0035984 // cellular response to trichostatin A // inferred from electronic annotation /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042100 // B cell proliferation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045652 // regulation of megakaryocyte differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048311 // mitochondrion distribution // inferred from sequence or structural similarity /// 0048666 // neuron development // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0055005 // ventricular cardiac myofibril assembly // inferred from sequence or structural similarity /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060025 // regulation of synaptic activity // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060297 // regulation of sarcomere organization // inferred from electronic annotation /// 0060536 // cartilage morphogenesis // inferred from electronic annotation /// 0061333 // renal tubule morphogenesis // inferred from electronic annotation /// 0061337 // cardiac conduction // inferred from sequence or structural similarity /// 0070375 // ERK5 cascade // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071498 // cellular response to fluid shear stress // inferred from electronic annotation /// 0071864 // positive regulation of cell proliferation in bone marrow // inferred from electronic annotation /// 0072102 // glomerulus morphogenesis // inferred from electronic annotation /// 0072160 // nephron tubule epithelial cell differentiation // inferred from electronic annotation /// 0090073 // positive regulation of protein homodimerization activity // inferred from electronic annotation /// 2000111 // positive regulation of macrophage apoptotic process // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation /// 2000987 // positive regulation of behavioral fear response // inferred from electronic annotation /// 2001013 // epithelial cell proliferation involved in renal tubule morphogenesis // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0030017 // sarcomere // inferred from electronic annotation </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0000987 // core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0001046 // core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0071837 // HMG box domain binding // inferred from electronic annotation </td> <td> -36.20 </td> <td> 108.75 </td> <td> -1.78 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 214864_s_at </td> <td> 214864_s_at </td> <td> AK024386 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024386.1 /DEF=Homo sapiens cDNA FLJ14324 fis, clone PLACE4000100, highly similar to Homo sapiens hydroxypyruvate reductase (GRHPR) gene.  /FEA=mRNA /DB_XREF=gi:10436760 /UG=Hs.155742 glyoxylate reductasehydroxypyruvate reductase </td> <td> AK024386 </td> <td> glyoxylate reductase/hydroxypyruvate reductase </td> <td> GRHPR </td> <td> 9380 </td> <td> NM_012203 /// XM_005251631 </td> <td> 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0007588 // excretion // inferred from mutant phenotype /// 0008152 // metabolic process // non-traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043648 // dicarboxylic acid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046487 // glyoxylate metabolic process // traceable author statement /// 0051259 // protein oligomerization // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005782 // peroxisomal matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004616 // phosphogluconate dehydrogenase (decarboxylating) activity // inferred from electronic annotation /// 0008465 // glycerate dehydrogenase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016618 // hydroxypyruvate reductase activity // inferred from direct assay /// 0030267 // glyoxylate reductase (NADP) activity // inferred from direct assay /// 0030267 // glyoxylate reductase (NADP) activity // non-traceable author statement /// 0031406 // carboxylic acid binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0048037 // cofactor binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation /// 0051287 // NAD binding // traceable author statement /// 0070402 // NADPH binding // inferred from direct assay </td> <td> 26.23 </td> <td> 211.01 </td> <td> 1.77 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201028_s_at </td> <td> 201028_s_at </td> <td> U82164 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U82164.1 /DEF=Human transmembrane protein CD99 type II mRNA, complete cds. /FEA=mRNA /GEN=CD99 /PROD=CD99 typeII /DB_XREF=gi:2149134 /UG=Hs.177543 antigen identified by monoclonal antibodies 12E7, F21 and O13 /FL=gb:BC002584.1 gb:BC003147.1 gb:M16279.1 gb:U82164.1 gb:NM_002414.1 </td> <td> U82164 </td> <td> CD99 molecule </td> <td> CD99 </td> <td> 4267 </td> <td> NM_001122898 /// NM_001277710 /// NM_002414 /// XM_005274530 /// XM_005274532 /// XM_005274533 /// XM_005274534 /// XM_005274535 /// XM_005274794 /// XM_005274796 /// XM_005274797 /// XM_005274798 /// XM_005274799 /// XM_006724489 /// XM_006724490 /// XM_006724491 /// XM_006724870 /// XM_006724871 /// XM_006724872 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -107.35 </td> <td> 813.48 </td> <td> -1.77 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 203418_at </td> <td> 203418_at </td> <td> NM_001237 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001237.1 /DEF=Homo sapiens cyclin A2 (CCNA2), mRNA. /FEA=mRNA /GEN=CCNA2 /PROD=cyclin A /DB_XREF=gi:4502612 /UG=Hs.85137 cyclin A2 /FL=gb:NM_001237.1 </td> <td> NM_001237 </td> <td> cyclin A2 </td> <td> CCNA2 </td> <td> 890 </td> <td> NM_001237 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007095 // mitotic G2 DNA damage checkpoint // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0010389 // regulation of G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0033762 // response to glucagon // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0001939 // female pronucleus // inferred from electronic annotation /// 0001940 // male pronucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation </td> <td> -33.48 </td> <td> 160.04 </td> <td> -1.77 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 209174_s_at </td> <td> 209174_s_at </td> <td> BC000978 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000978.2 /DEF=Homo sapiens, hypothetical protein FLJ20259, clone MGC:5396, mRNA, complete cds.  /FEA=mRNA /PROD=hypothetical protein FLJ20259 /DB_XREF=gi:12803027 /UG=Hs.9956 hypothetical protein FLJ20259 /FL=gb:BC000978.2 gb:NM_017730.1 </td> <td> BC000978 </td> <td> glutamine-rich 1 </td> <td> QRICH1 </td> <td> 54870 </td> <td> NM_017730 /// NM_198880 /// XM_005265248 /// XM_006713212 </td> <td> 0042981 // regulation of apoptotic process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td>  </td> <td> 35.30 </td> <td> 164.85 </td> <td> 1.77 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 202168_at </td> <td> 202168_at </td> <td> NM_003187 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003187.1 /DEF=Homo sapiens TATA box binding protein (TBP)-associated factor, RNA polymerase II, G, 32kD (TAF2G), mRNA.  /FEA=mRNA /GEN=TAF2G /PROD=TATA box binding protein (TBP)-associatedfactor, RNA polymerase II, G, 32kD /DB_XREF=gi:4507350 /UG=Hs.60679 TATA box binding protein (TBP)-associated factor, RNA polymerase II, G, 32kD /FL=gb:BC003400.1 gb:NM_003187.1 gb:U21858.1 gb:U25112.1 gb:U30504.1 </td> <td> NM_003187 </td> <td> adenylate kinase 6 /// TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa </td> <td> AK6 /// TAF9 </td> <td> 6880 /// 102157402 </td> <td> NM_001015891 /// NM_001015892 /// NM_003187 /// NM_016283 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006352 // DNA-templated transcription, initiation // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred by curator /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046939 // nucleotide phosphorylation // inferred from direct assay /// 0046939 // nucleotide phosphorylation // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay /// 0060760 // positive regulation of response to cytokine stimulus // inferred from mutant phenotype /// 0070555 // response to interleukin-1 // inferred from mutant phenotype /// 1902166 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred by curator </td> <td> 0000125 // PCAF complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from direct assay /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030914 // STAGA complex // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay /// 0070761 // pre-snoRNP complex // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0004017 // adenylate kinase activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0070742 // C2H2 zinc finger domain binding // inferred from physical interaction </td> <td> 34.93 </td> <td> 348.96 </td> <td> 1.77 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 211474_s_at </td> <td> 211474_s_at </td> <td> BC004948 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004948.1 /DEF=Homo sapiens, clone MGC:10846, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:10846) /DB_XREF=gi:13436313 /UG=Hs.41072 serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 6 /FL=gb:BC004948.1 </td> <td> BC004948 </td> <td> serpin peptidase inhibitor, clade B (ovalbumin), member 6 </td> <td> SERPINB6 </td> <td> 5269 </td> <td> NM_001195291 /// NM_001271822 /// NM_001271823 /// NM_001271824 /// NM_001271825 /// NM_004568 /// XM_005249181 /// XM_005249183 /// XM_006715112 /// XM_006715113 </td> <td> 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0030162 // regulation of proteolysis // not recorded </td> <td> 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> -39.38 </td> <td> 343.74 </td> <td> -1.77 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200002_at </td> <td> 200002_at </td> <td> NM_007209 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007209.1 /DEF=Homo sapiens ribosomal protein L35 (RPL35), mRNA. /FEA=mRNA /GEN=RPL35 /PROD=ribosomal protein L35 /DB_XREF=gi:6005859 /UG=Hs.182825 ribosomal protein L35 /FL=gb:BC000348.1 gb:U12465.1 gb:NM_007209.1 </td> <td> NM_007209 </td> <td> ribosomal protein L35 </td> <td> RPL35 </td> <td> 11224 </td> <td> NM_007209 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003729 // mRNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -82.58 </td> <td> 1706.29 </td> <td> -1.77 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208485_x_at </td> <td> 208485_x_at </td> <td> NM_003879 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003879.1 /DEF=Homo sapiens CASP8 and FADD-like apoptosis regulator (CFLAR), mRNA. /FEA=CDS /GEN=CFLAR /PROD=CASP8 and FADD-like apoptosis regulator /DB_XREF=gi:4505246 /UG=Hs.195175 CASP8 and FADD-like apoptosis regulator /FL=gb:AF041462.1 gb:NM_003879.1 </td> <td> NM_003879 </td> <td> CASP8 and FADD-like apoptosis regulator </td> <td> CFLAR </td> <td> 8837 </td> <td> NM_001127183 /// NM_001127184 /// NM_001202515 /// NM_001202516 /// NM_001202517 /// NM_001202518 /// NM_001202519 /// NM_003879 /// XM_005246935 /// XM_005246936 /// XM_005246937 /// XM_005246938 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from sequence or structural similarity /// 0014732 // skeletal muscle atrophy // inferred from sequence or structural similarity /// 0014842 // regulation of satellite cell proliferation // inferred from sequence or structural similarity /// 0014866 // skeletal myofibril assembly // inferred from sequence or structural similarity /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043403 // skeletal muscle tissue regeneration // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0060544 // regulation of necroptotic process // inferred from direct assay /// 0097190 // apoptotic signaling pathway // traceable author statement /// 1901740 // negative regulation of myoblast fusion // inferred from sequence or structural similarity /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0031264 // death-inducing signaling complex // inferred from direct assay /// 0031265 // CD95 death-inducing signaling complex // inferred from electronic annotation /// 0097342 // ripoptosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0004197 // cysteine-type endopeptidase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // inferred from direct assay /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0035877 // death effector domain binding // not recorded </td> <td> 68.75 </td> <td> 243.18 </td> <td> 1.77 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 203416_at </td> <td> 203416_at </td> <td> NM_000560 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000560.1 /DEF=Homo sapiens CD53 antigen (CD53), mRNA. /FEA=mRNA /GEN=CD53 /PROD=CD53 antigen /DB_XREF=gi:10834971 /UG=Hs.82212 CD53 antigen /FL=gb:NM_000560.1 gb:M60871.1 gb:M37033.1 </td> <td> NM_000560 </td> <td> CD53 molecule </td> <td> CD53 </td> <td> 963 </td> <td> NM_000560 /// NM_001040033 /// XM_006711053 </td> <td> 0007165 // signal transduction // non-traceable author statement /// 1901741 // positive regulation of myoblast fusion // inferred from sequence or structural similarity </td> <td> 0001772 // immunological synapse // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -33.92 </td> <td> 100.41 </td> <td> -1.76 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201307_at </td> <td> 201307_at </td> <td> AL534972 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL534972 /FEA=EST /DB_XREF=gi:12798465 /DB_XREF=est:AL534972 /CLONE=CS0DF007YI02 (5 prime) /UG=Hs.8768 hypothetical protein FLJ10849 /FL=gb:NM_018243.1 </td> <td> AL534972 </td> <td> septin 11 </td> <td> SEPT11 </td> <td> 55752 </td> <td> NM_018243 /// XM_005263120 /// XM_005263121 /// XM_005263122 /// XM_006714259 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> -52.72 </td> <td> 670.89 </td> <td> -1.76 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 218474_s_at </td> <td> 218474_s_at </td> <td> NM_018992 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018992.1 /DEF=Homo sapiens hypothetical protein (FLJ20040), mRNA. /FEA=mRNA /GEN=FLJ20040 /PROD=hypothetical protein /DB_XREF=gi:9506650 /UG=Hs.61960 hypothetical protein /FL=gb:NM_018992.1 </td> <td> NM_018992 </td> <td> potassium channel tetramerization domain containing 5 </td> <td> KCTD5 </td> <td> 54442 </td> <td> NM_018992 </td> <td> 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from direct assay </td> <td> 34.80 </td> <td> 196.97 </td> <td> 1.76 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 202333_s_at </td> <td> 202333_s_at </td> <td> AA877765 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA877765 /FEA=EST /DB_XREF=gi:2986730 /DB_XREF=est:nr06f05.s1 /CLONE=IMAGE:1161057 /UG=Hs.811 ubiquitin-conjugating enzyme E2B (RAD6 homolog) /FL=gb:M74525.1 gb:NM_003337.1 </td> <td> AA877765 </td> <td> ubiquitin-conjugating enzyme E2B </td> <td> UBE2B </td> <td> 7320 </td> <td> NM_003337 </td> <td> 0000209 // protein polyubiquitination // inferred from mutant phenotype /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006281 // DNA repair // inferred from genetic interaction /// 0006301 // postreplication repair // inferred from direct assay /// 0006301 // postreplication repair // non-traceable author statement /// 0006344 // maintenance of chromatin silencing // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0006513 // protein monoubiquitination // inferred from mutant phenotype /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0007283 // spermatogenesis // traceable author statement /// 0007288 // sperm axoneme assembly // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009411 // response to UV // inferred from genetic interaction /// 0010845 // positive regulation of reciprocal meiotic recombination // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031056 // regulation of histone modification // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0033128 // negative regulation of histone phosphorylation // inferred from electronic annotation /// 0033522 // histone H2A ubiquitination // inferred from mutant phenotype /// 0042493 // response to drug // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043951 // negative regulation of cAMP-mediated signaling // inferred from direct assay /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0051026 // chiasma assembly // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0060070 // canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 0070076 // histone lysine demethylation // inferred from electronic annotation /// 0070193 // synaptonemal complex organization // inferred from electronic annotation /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0000785 // chromatin // inferred from sequence or structural similarity /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0001741 // XY body // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005657 // replication fork // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033503 // HULC complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> -97.98 </td> <td> 357.84 </td> <td> -1.76 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208727_s_at </td> <td> 208727_s_at </td> <td> BC002711 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002711.1 /DEF=Homo sapiens, cell division cycle 42 (GTP-binding protein, 25kD), clone MGC:3497, mRNA, complete cds.  /FEA=mRNA /PROD=cell division cycle 42 (GTP-binding protein,25kD) /DB_XREF=gi:12803746 /UG=Hs.146409 cell division cycle 42 (GTP-binding protein, 25kD) /FL=gb:BC002711.1 gb:BC003682.1 gb:M57298.1 gb:NM_001791.1 </td> <td> BC002711 </td> <td> cell division cycle 42 </td> <td> CDC42 </td> <td> 998 </td> <td> NM_001039802 /// NM_001791 /// NM_044472 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0003161 // cardiac conduction system development // inferred from electronic annotation /// 0003334 // keratinocyte development // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007088 // regulation of mitosis // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030225 // macrophage differentiation // traceable author statement /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031274 // positive regulation of pseudopodium assembly // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0031333 // negative regulation of protein complex assembly // inferred from physical interaction /// 0031424 // keratinization // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from mutant phenotype /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043497 // regulation of protein heterodimerization activity // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048554 // positive regulation of metalloenzyme activity // inferred from electronic annotation /// 0048664 // neuron fate determination // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051246 // regulation of protein metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051489 // regulation of filopodium assembly // inferred from direct assay /// 0051647 // nucleus localization // inferred from electronic annotation /// 0051683 // establishment of Golgi localization // inferred from sequence or structural similarity /// 0051835 // positive regulation of synapse structural plasticity // inferred from electronic annotation /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0060047 // heart contraction // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway // inferred from electronic annotation /// 0060661 // submandibular salivary gland formation // inferred from electronic annotation /// 0060684 // epithelial-mesenchymal cell signaling // inferred from electronic annotation /// 0060789 // hair follicle placode formation // inferred from electronic annotation /// 0071338 // positive regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0072384 // organelle transport along microtubule // inferred from sequence or structural similarity /// 0090135 // actin filament branching // inferred from electronic annotation /// 0090136 // epithelial cell-cell adhesion // inferred from electronic annotation /// 0090316 // positive regulation of intracellular protein transport // inferred from electronic annotation /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030141 // secretory granule // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071944 // cell periphery // inferred from electronic annotation /// 0072686 // mitotic spindle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction /// 0034191 // apolipoprotein A-I receptor binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -285.88 </td> <td> 1071.49 </td> <td> -1.76 </td> <td> 0.12 </td> <td> 0.17 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212110_at </td> <td> 212110_at </td> <td> D31887 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D31887.1 /DEF=Human mRNA for KIAA0062 gene, partial cds. /FEA=mRNA /GEN=KIAA0062 /DB_XREF=gi:505101 /UG=Hs.89868 KIAA0062 protein </td> <td> D31887 </td> <td> solute carrier family 39 (zinc transporter), member 14 </td> <td> SLC39A14 </td> <td> 23516 </td> <td> NM_001128431 /// NM_001135153 /// NM_001135154 /// NM_015359 /// XM_005273463 /// XM_005273464 /// XM_005273465 /// XM_005273466 /// XM_006716323 /// XM_006716324 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0006882 // cellular zinc ion homeostasis // inferred from direct assay /// 0015684 // ferrous iron transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0071577 // zinc ion transmembrane transport // inferred from direct assay /// 0071577 // zinc ion transmembrane transport // inferred from mutant phenotype /// 0071578 // zinc ion transmembrane import // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005385 // zinc ion transmembrane transporter activity // inferred from direct assay /// 0015093 // ferrous iron transmembrane transporter activity // inferred from electronic annotation /// 0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation </td> <td> -32.92 </td> <td> 276.46 </td> <td> -1.76 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201667_at </td> <td> 201667_at </td> <td> NM_000165 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000165.2 /DEF=Homo sapiens gap junction protein, alpha 1, 43kD (connexin 43) (GJA1), mRNA.  /FEA=mRNA /GEN=GJA1 /PROD=connexin 43 /DB_XREF=gi:4755136 /UG=Hs.74471 gap junction protein, alpha 1, 43kD (connexin 43) /FL=gb:M65188.1 gb:NM_000165.2 </td> <td> NM_000165 </td> <td> gap junction protein, alpha 1, 43kDa </td> <td> GJA1 </td> <td> 2697 </td> <td> NM_000165 </td> <td> 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002070 // epithelial cell maturation // inferred from electronic annotation /// 0002088 // lens development in camera-type eye // inferred from electronic annotation /// 0002544 // chronic inflammatory response // inferred from electronic annotation /// 0003104 // positive regulation of glomerular filtration // inferred from electronic annotation /// 0003158 // endothelium development // inferred from electronic annotation /// 0003294 // atrial ventricular junction remodeling // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007512 // adult heart development // inferred from electronic annotation /// 0008016 // regulation of heart contraction // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009268 // response to pH // inferred from electronic annotation /// 0010232 // vascular transport // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010643 // cell communication by chemical coupling // inferred from electronic annotation /// 0010644 // cell communication by electrical coupling // inferred from direct assay /// 0010652 // positive regulation of cell communication by chemical coupling // inferred from electronic annotation /// 0015867 // ATP transport // inferred from electronic annotation /// 0016264 // gap junction assembly // traceable author statement /// 0030500 // regulation of bone mineralization // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0034405 // response to fluid shear stress // inferred from electronic annotation /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043403 // skeletal muscle tissue regeneration // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0045844 // positive regulation of striated muscle tissue development // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0045909 // positive regulation of vasodilation // inferred from electronic annotation /// 0046850 // regulation of bone remodeling // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051924 // regulation of calcium ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from direct assay /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060156 // milk ejection // inferred from electronic annotation /// 0060174 // limb bud formation // inferred from electronic annotation /// 0060307 // regulation of ventricular cardiac muscle cell membrane repolarization // inferred from electronic annotation /// 0060371 // regulation of atrial cardiac muscle cell membrane depolarization // inferred from electronic annotation /// 0060373 // regulation of ventricular cardiac muscle cell membrane depolarization // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0061337 // cardiac conduction // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0086014 // atrial cardiac muscle cell action potential // traceable author statement /// 2000810 // regulation of tight junction assembly // inferred from electronic annotation /// 2000987 // positive regulation of behavioral fear response // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005921 // gap junction // inferred from direct assay /// 0005921 // gap junction // inferred from sequence or structural similarity /// 0005922 // connexon complex // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from direct assay /// 0014704 // intercalated disc // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // traceable author statement /// 0043292 // contractile fiber // inferred from electronic annotation /// 0045121 // membrane raft // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from electronic annotation /// 0005243 // gap junction channel activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0015075 // ion transmembrane transporter activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0071253 // connexin binding // inferred from electronic annotation /// 0097110 // scaffold protein binding // inferred from electronic annotation </td> <td> 125.20 </td> <td> 1481.47 </td> <td> 1.76 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 220240_s_at </td> <td> 220240_s_at </td> <td> NM_017905 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017905.1 /DEF=Homo sapiens hypothetical protein FLJ20623 (FLJ20623), mRNA. /FEA=mRNA /GEN=FLJ20623 /PROD=hypothetical protein FLJ20623 /DB_XREF=gi:8923574 /UG=Hs.27337 hypothetical protein FLJ20623 /FL=gb:NM_017905.1 </td> <td> NM_017905 </td> <td> transmembrane and coiled-coil domains 3 </td> <td> TMCO3 </td> <td> 55002 </td> <td> NM_017905 /// XM_005268318 /// XM_005268319 /// XM_006719969 /// XM_006719970 /// XM_006719971 /// XM_006719972 /// XM_006719973 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0015297 // antiporter activity // inferred from electronic annotation /// 0015299 // solute:proton antiporter activity // inferred from electronic annotation </td> <td> 35.50 </td> <td> 187.57 </td> <td> 1.76 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208826_x_at </td> <td> 208826_x_at </td> <td> U27143 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U27143.1 /DEF=Human protein kinase C inhibitor-I cDNA, complete cds. /FEA=mRNA /PROD=protein kinase C inhibitor-I /DB_XREF=gi:862932 /UG=Hs.256697 histidine triad nucleotide-binding protein /FL=gb:BC001287.1 gb:U27143.1 </td> <td> U27143 </td> <td> histidine triad nucleotide binding protein 1 </td> <td> HINT1 </td> <td> 3094 </td> <td> NM_005340 /// NR_024610 /// NR_024611 /// NR_073488 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009154 // purine ribonucleotide catabolic process // inferred from direct assay /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from mutant phenotype </td> <td> 0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // traceable author statement /// 0016787 // hydrolase activity // inferred from direct assay </td> <td> -68.65 </td> <td> 1299.88 </td> <td> -1.76 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 214085_x_at </td> <td> 214085_x_at </td> <td> AI912583 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI912583 /FEA=EST /DB_XREF=gi:5632438 /DB_XREF=est:we11d05.x1 /CLONE=IMAGE:2340777 /UG=Hs.154762 HIV-1 rev binding protein 2 </td> <td> AI912583 </td> <td> GLI pathogenesis-related 1 </td> <td> GLIPR1 </td> <td> 11010 </td> <td> NM_006851 </td> <td> 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 82.88 </td> <td> 362.16 </td> <td> 1.76 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 209323_at </td> <td> 209323_at </td> <td> AF081567 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF081567.1 /DEF=Homo sapiens death associated protein 4 (DAP4) mRNA, complete cds. /FEA=mRNA /GEN=DAP4 /PROD=death associated protein 4 /DB_XREF=gi:9886758 /UG=Hs.177574 protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) /FL=gb:AF007393.1 gb:NM_004705.1 gb:AF081567.1 </td> <td> AF081567 </td> <td> protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) </td> <td> PRKRIR </td> <td> 5612 </td> <td> NM_004705 </td> <td> 0006950 // response to stress // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> 54.38 </td> <td> 259.54 </td> <td> 1.76 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 214800_x_at </td> <td> 214800_x_at </td> <td> R83000 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:R83000 /FEA=EST /DB_XREF=gi:927844 /DB_XREF=est:yp87a05.s1 /CLONE=IMAGE:194384 /UG=Hs.101025 basic transcription factor 3 </td> <td> R83000 </td> <td> basic transcription factor 3 </td> <td> BTF3 </td> <td> 689 </td> <td> NM_001037637 /// NM_001207 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 81.52 </td> <td> 563.94 </td> <td> 1.76 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200034_s_at </td> <td> 200034_s_at </td> <td> NM_000970 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000970.1 /DEF=Homo sapiens ribosomal protein L6 (RPL6), mRNA. /FEA=mRNA /GEN=RPL6 /PROD=ribosomal protein L6 /DB_XREF=gi:4506656 /UG=Hs.174131 ribosomal protein L6 /FL=gb:BC004138.1 gb:D17554.1 gb:NM_000970.1 gb:AF261087.1 </td> <td> NM_000970 </td> <td> ribosomal protein L6 </td> <td> RPL6 </td> <td> 6128 </td> <td> NM_000970 /// NM_001024662 /// XM_005253920 /// XM_006719546 /// XM_006719547 /// XM_006719548 /// XM_006719549 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay </td> <td> 0003677 // DNA binding // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -186.17 </td> <td> 2130.89 </td> <td> -1.76 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200773_x_at </td> <td> 200773_x_at </td> <td> NM_002823 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002823.1 /DEF=Homo sapiens prothymosin, alpha (gene sequence 28) (PTMA), mRNA. /FEA=mRNA /GEN=PTMA /PROD=prothymosin, alpha (gene sequence 28) /DB_XREF=gi:4506276 /UG=Hs.250655 prothymosin, alpha (gene sequence 28) /FL=gb:BC003510.1 gb:M26708.1 gb:M14630.1 gb:NM_002823.1 </td> <td> NM_002823 </td> <td> prothymosin, alpha </td> <td> PTMA </td> <td> 5757 </td> <td> NM_001099285 /// NM_002823 </td> <td> 0006351 // transcription, DNA-templated // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> 154.00 </td> <td> 1539.78 </td> <td> 1.75 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200079_s_at </td> <td> 200079_s_at </td> <td> AF285758 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF285758.1 /DEF=Homo sapiens lysyl-tRNA synthetase mRNA, complete cds; nuclear gene for mitochondrial product; alternatively spliced.  /FEA=CDS /PROD=lysyl-tRNA synthetase /DB_XREF=gi:11095908 /UG=Hs.3100 lysyl-tRNA synthetase /FL=gb:AF285758.1 </td> <td> AF285758 </td> <td> lysyl-tRNA synthetase </td> <td> KARS </td> <td> 3735 </td> <td> NM_001130089 /// NM_005548 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006430 // lysyl-tRNA aminoacylation // inferred from direct assay /// 0008033 // tRNA processing // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015966 // diadenosine tetraphosphate biosynthetic process // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0017101 // aminoacyl-tRNA synthetase multienzyme complex // inferred from electronic annotation </td> <td> 0000049 // tRNA binding // non-traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004824 // lysine-tRNA ligase activity // inferred from direct assay /// 0004824 // lysine-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -55.12 </td> <td> 740.61 </td> <td> -1.75 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 213041_s_at </td> <td> 213041_s_at </td> <td> BE798517 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE798517 /FEA=EST /DB_XREF=gi:10219715 /DB_XREF=est:601583226F1 /CLONE=IMAGE:3937495 /UG=Hs.89761 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit </td> <td> BE798517 </td> <td> ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit </td> <td> ATP5D </td> <td> 513 </td> <td> NM_001001975 /// NM_001687 </td> <td> 0006119 // oxidative phosphorylation // non-traceable author statement /// 0006200 // ATP catabolic process // non-traceable author statement /// 0006754 // ATP biosynthetic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // non-traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046688 // response to copper ion // non-traceable author statement </td> <td> 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) // non-traceable author statement /// 0005739 // mitochondrion // non-traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005753 // mitochondrial proton-transporting ATP synthase complex // non-traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0005524 // ATP binding // non-traceable author statement /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator /// 0043531 // ADP binding // non-traceable author statement /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation </td> <td> 38.33 </td> <td> 130.04 </td> <td> 1.75 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 203666_at </td> <td> 203666_at </td> <td> NM_000609 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000609.1 /DEF=Homo sapiens stromal cell-derived factor 1 (SDF1), mRNA. /FEA=mRNA /GEN=SDF1 /PROD=stromal cell-derived factor 1 /DB_XREF=gi:10834987 /UG=Hs.237356 stromal cell-derived factor 1 /FL=gb:NM_000609.1 gb:L36033.1 gb:U16752.1 </td> <td> NM_000609 </td> <td> chemokine (C-X-C motif) ligand 12 </td> <td> CXCL12 </td> <td> 6387 </td> <td> NM_000609 /// NM_001033886 /// NM_001178134 /// NM_001277990 /// NM_199168 </td> <td> 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007281 // germ cell development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0008045 // motor neuron axon guidance // inferred from electronic annotation /// 0008064 // regulation of actin polymerization or depolymerization // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0022029 // telencephalon cell migration // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0033603 // positive regulation of dopamine secretion // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0048842 // positive regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation /// 0051924 // regulation of calcium ion transport // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0060326 // cell chemotaxis // traceable author statement /// 0070098 // chemokine-mediated signaling pathway // inferred from direct assay /// 0090026 // positive regulation of monocyte chemotaxis // inferred from direct assay /// 0090280 // positive regulation of calcium ion import // traceable author statement /// 1902230 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage // inferred from direct assay /// 2000107 // negative regulation of leukocyte apoptotic process // inferred from direct assay /// 2000406 // positive regulation of T cell migration // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042379 // chemokine receptor binding // inferred from mutant phenotype /// 0045236 // CXCR chemokine receptor binding // inferred from direct assay </td> <td> 25.75 </td> <td> 64.15 </td> <td> 1.75 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 217860_at </td> <td> 217860_at </td> <td> NM_004544 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004544.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10 (42kD) (NDUFA10), mRNA.  /FEA=mRNA /GEN=NDUFA10 /PROD=NADH dehydrogenase (ubiquinone) 1 alphasubcomplex, 10 (42kD) /DB_XREF=gi:4758767 /UG=Hs.198271 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10 (42kD) /FL=gb:BC003417.1 gb:AF087661.1 gb:NM_004544.1 </td> <td> NM_004544 </td> <td> NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa </td> <td> NDUFA10 </td> <td> 4705 </td> <td> NM_004544 /// XM_005247006 /// XM_006712543 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0005524 // ATP binding // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation </td> <td> -60.80 </td> <td> 390.48 </td> <td> -1.75 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 217733_s_at </td> <td> 217733_s_at </td> <td> NM_021103 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021103.1 /DEF=Homo sapiens thymosin, beta 10 (TMSB10), mRNA. /FEA=mRNA /GEN=TMSB10 /PROD=thymosin, beta 10 /DB_XREF=gi:10863894 /UG=Hs.76293 thymosin, beta 10 /FL=gb:NM_021103.1 gb:M92381.1 gb:M20259.1 </td> <td> NM_021103 </td> <td> thymosin beta 10 </td> <td> TMSB10 </td> <td> 9168 </td> <td> NM_021103 </td> <td> 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0042989 // sequestering of actin monomers // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation </td> <td> -541.05 </td> <td> 4132.07 </td> <td> -1.75 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 33132_at </td> <td> 33132_at </td> <td> U37012 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. U37012:Human cleavage and polyadenylation specificity factor mRNA, complete cds /cds=(51,4379) /gb=U37012 /gi=1045573 /ug=Hs.83727 /len=4463 </td> <td> U37012 </td> <td> cleavage and polyadenylation specific factor 1, 160kDa /// microRNA 1234 /// microRNA 6849 /// microRNA 939 </td> <td> CPSF1 /// MIR1234 /// MIR6849 /// MIR939 </td> <td> 29894 /// 100126351 /// 100302196 /// 102466749 </td> <td> NM_013291 /// NR_030635 /// NR_031600 /// NR_106908 /// XM_006716548 /// XM_006716549 /// XM_006716550 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // inferred from direct assay /// 0006379 // mRNA cleavage // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 44.90 </td> <td> 164.15 </td> <td> 1.75 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 217755_at </td> <td> 217755_at </td> <td> NM_016185 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016185.1 /DEF=Homo sapiens hematological and neurological expressed 1 (HN1), mRNA.  /FEA=mRNA /GEN=HN1 /PROD=hematological and neurological expressed 1 /DB_XREF=gi:7705876 /UG=Hs.109706 hematological and neurological expressed 1 /FL=gb:AF060925.1 gb:BC001420.1 gb:AF177862.1 gb:NM_016185.1 </td> <td> NM_016185 </td> <td> hematological and neurological expressed 1 </td> <td> HN1 </td> <td> 51155 </td> <td> NM_001002032 /// NM_001002033 /// NM_001288609 /// NM_001288610 /// NM_001288611 /// NM_016185 /// NR_109933 /// XM_006721931 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td>  </td> <td> 38.70 </td> <td> 443.32 </td> <td> 1.75 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201391_at </td> <td> 201391_at </td> <td> NM_016292 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016292.1 /DEF=Homo sapiens heat shock protein 75 (TRAP1), mRNA. /FEA=mRNA /GEN=TRAP1 /PROD=tumor necrosis factor type 1 receptor associatedprotein /DB_XREF=gi:7706484 /UG=Hs.182366 heat shock protein 75 /FL=gb:BC002994.1 gb:AF154108.1 gb:NM_016292.1 </td> <td> NM_016292 </td> <td> TNF receptor-associated protein 1 </td> <td> TRAP1 </td> <td> 10131 </td> <td> NM_001272049 /// NM_016292 </td> <td> 0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 1901856 // negative regulation of cellular respiration // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 31.10 </td> <td> 170.38 </td> <td> 1.75 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 204050_s_at </td> <td> 204050_s_at </td> <td> NM_001833 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001833.1 /DEF=Homo sapiens clathrin, light polypeptide (Lca) (CLTA), transcript variant nonbrain, mRNA.  /FEA=mRNA /GEN=CLTA /PROD=clathrin, light polypeptide A (Lca) isoform a /DB_XREF=gi:4502898 /UG=Hs.104143 clathrin, light polypeptide (Lca) /FL=gb:M20472.1 gb:NM_001833.1 </td> <td> NM_001833 </td> <td> clathrin, light chain A </td> <td> CLTA </td> <td> 1211 </td> <td> NM_001076677 /// NM_001184760 /// NM_001184761 /// NM_001184762 /// NM_001833 /// NM_007096 </td> <td> 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from sequence or structural similarity /// 0030118 // clathrin coat // non-traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // inferred from electronic annotation /// 0030132 // clathrin coat of coated pit // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071439 // clathrin complex // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032050 // clathrin heavy chain binding // inferred from physical interaction /// 0042277 // peptide binding // inferred from electronic annotation </td> <td> -37.92 </td> <td> 717.06 </td> <td> -1.75 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 216988_s_at </td> <td> 216988_s_at </td> <td> L48722 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:L48722 /DEF=Homo sapiens (clone hh18) protein tyrosine phosphatase (ptp-IV1r) gene, 5 end of cds /FEA=CDS /DB_XREF=gi:1246237 /UG=Hs.82911 protein tyrosine phosphatase type IVA, member 2 </td> <td> L48722 </td> <td> protein tyrosine phosphatase type IVA, member 2 </td> <td> PTP4A2 </td> <td> 8073 </td> <td> NM_001195100 /// NM_001195101 /// NM_003479 /// NM_080391 /// NM_080392 /// XM_005271229 /// XM_005271230 /// XM_005271231 /// XM_005271232 /// XM_006710927 /// XM_006710928 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004727 // prenylated protein tyrosine phosphatase activity // traceable author statement /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> -100.55 </td> <td> 708.73 </td> <td> -1.75 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212515_s_at </td> <td> 212515_s_at </td> <td> BG492602 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG492602 /FEA=EST /DB_XREF=gi:13454114 /DB_XREF=est:602536568F1 /CLONE=IMAGE:4655296 /UG=Hs.147916 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 3 </td> <td> BG492602 </td> <td> DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked </td> <td> DDX3X </td> <td> 1654 </td> <td> NM_001193416 /// NM_001193417 /// NM_001356 /// NM_024005 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 0009615 // response to virus // inferred from direct assay /// 0010501 // RNA secondary structure unwinding // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0031333 // negative regulation of protein complex assembly // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // traceable author statement /// 0034063 // stress granule assembly // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042256 // mature ribosome assembly // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045948 // positive regulation of translational initiation // inferred from mutant phenotype /// 0071243 // cellular response to arsenic-containing substance // inferred from direct assay /// 0071470 // cellular response to osmotic stress // inferred from direct assay /// 0071651 // positive regulation of chemokine (C-C motif) ligand 5 production // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 1900087 // positive regulation of G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from direct assay /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004004 // ATP-dependent RNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0008143 // poly(A) binding // inferred from direct assay /// 0008190 // eukaryotic initiation factor 4E binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0031369 // translation initiation factor binding // inferred from direct assay /// 0035613 // RNA stem-loop binding // inferred from direct assay /// 0043024 // ribosomal small subunit binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048027 // mRNA 5'-UTR binding // inferred from direct assay </td> <td> -52.05 </td> <td> 478.80 </td> <td> -1.74 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 217028_at </td> <td> 217028_at </td> <td> AJ224869 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AJ224869 /DEF=Homo sapiens CXCR4 gene encoding receptor CXCR4 /FEA=mRNA /DB_XREF=gi:3059119 /UG=Hs.89414 chemokine (C-X-C motif), receptor 4 (fusin) </td> <td> AJ224869 </td> <td> chemokine (C-X-C motif) receptor 4 </td> <td> CXCR4 </td> <td> 7852 </td> <td> NM_001008540 /// NM_003467 </td> <td> 0000187 // activation of MAPK activity // traceable author statement /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from expression pattern /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0002407 // dendritic cell chemotaxis // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007204 // positive regulation of cytosolic calcium ion concentration // traceable author statement /// 0007281 // germ cell development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008045 // motor neuron axon guidance // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from mutant phenotype /// 0030260 // entry into host cell // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0043217 // myelin maintenance // inferred from sequence or structural similarity /// 0048699 // generation of neurons // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0061351 // neural precursor cell proliferation // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // non-traceable author statement /// 0071345 // cellular response to cytokine stimulus // inferred from direct assay </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005764 // lysosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004950 // chemokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement /// 0016494 // C-X-C chemokine receptor activity // non-traceable author statement /// 0019955 // cytokine binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032027 // myosin light chain binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay </td> <td> -86.98 </td> <td> 397.99 </td> <td> -1.74 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 204105_s_at </td> <td> 204105_s_at </td> <td> NM_005010 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005010.1 /DEF=Homo sapiens neuronal cell adhesion molecule (NRCAM), mRNA. /FEA=mRNA /GEN=NRCAM /PROD=neuronal cell adhesion molecule /DB_XREF=gi:4826863 /UG=Hs.7912 neuronal cell adhesion molecule /FL=gb:AB002341.1 gb:NM_005010.1 </td> <td> NM_005010 </td> <td> neuronal cell adhesion molecule </td> <td> NRCAM </td> <td> 4897 </td> <td> NM_001037132 /// NM_001037133 /// NM_001193582 /// NM_001193583 /// NM_001193584 /// NM_005010 /// XM_005250373 /// XM_005250380 /// XM_005250383 /// XM_005250385 /// XM_006716003 /// XM_006716004 /// XM_006716005 /// XM_006716006 /// XM_006716007 /// XM_006716008 /// XM_006716009 /// XM_006716010 /// XM_006716011 /// XM_006716012 /// XM_006716013 /// XM_006716014 /// XR_428177 /// XR_428178 </td> <td> 0001525 // angiogenesis // inferred from expression pattern /// 0001764 // neuron migration // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007409 // axonogenesis // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007413 // axonal fasciculation // non-traceable author statement /// 0007416 // synapse assembly // traceable author statement /// 0007417 // central nervous system development // non-traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // non-traceable author statement /// 0019227 // neuronal action potential propagation // inferred from electronic annotation /// 0030516 // regulation of axon extension // non-traceable author statement /// 0031290 // retinal ganglion cell axon guidance // inferred from electronic annotation /// 0034113 // heterotypic cell-cell adhesion // inferred from electronic annotation /// 0045162 // clustering of voltage-gated sodium channels // inferred from direct assay /// 0045666 // positive regulation of neuron differentiation // non-traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043005 // neuron projection // non-traceable author statement /// 0043194 // axon initial segment // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030506 // ankyrin binding // inferred from direct assay /// 0086080 // protein binding involved in heterotypic cell-cell adhesion // inferred from electronic annotation </td> <td> -31.65 </td> <td> 266.02 </td> <td> -1.74 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 209803_s_at </td> <td> 209803_s_at </td> <td> AF001294 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF001294.1 /DEF=Homo sapiens IPL (IPL) mRNA, complete cds. /FEA=mRNA /GEN=IPL /PROD=IPL /DB_XREF=gi:2150049 /UG=Hs.154036 tumor suppressing subtransferable candidate 3 /FL=gb:BC005034.1 gb:AF001294.1 gb:AF019953.1 gb:AF035444.1 gb:NM_003311.1 </td> <td> AF001294 </td> <td> pleckstrin homology-like domain, family A, member 2 </td> <td> PHLDA2 </td> <td> 7262 </td> <td> NM_003311 </td> <td> 0001890 // placenta development // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0045995 // regulation of embryonic development // inferred from electronic annotation /// 0070873 // regulation of glycogen metabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> 46.75 </td> <td> 294.93 </td> <td> 1.74 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208615_s_at </td> <td> 208615_s_at </td> <td> BF795101 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF795101 /FEA=EST /DB_XREF=gi:12100155 /DB_XREF=est:602256433F1 /CLONE=IMAGE:4339496 /UG=Hs.82911 protein tyrosine phosphatase type IVA, member 2 /FL=gb:U48297.1 gb:NM_003479.1 gb:AF208850.1 </td> <td> BF795101 </td> <td> protein tyrosine phosphatase type IVA, member 2 </td> <td> PTP4A2 </td> <td> 8073 </td> <td> NM_001195100 /// NM_001195101 /// NM_003479 /// NM_080391 /// NM_080392 /// XM_005271229 /// XM_005271230 /// XM_005271231 /// XM_005271232 /// XM_006710927 /// XM_006710928 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004727 // prenylated protein tyrosine phosphatase activity // traceable author statement /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> 56.85 </td> <td> 241.80 </td> <td> 1.74 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212506_at </td> <td> 212506_at </td> <td> AL135735 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL135735 /FEA=EST /DB_XREF=gi:6603922 /DB_XREF=est:DKFZp586N0217_s1 /CLONE=DKFZp586N0217 /UG=Hs.7885 phosphatidylinositol binding clathrin assembly protein </td> <td> AL135735 </td> <td> phosphatidylinositol binding clathrin assembly protein </td> <td> PICALM </td> <td> 8301 </td> <td> NM_001008660 /// NM_001206946 /// NM_001206947 /// NM_007166 /// XM_005274322 /// XM_005274323 /// XM_005274324 /// XM_005274325 /// XM_005274326 /// XM_005274327 /// XM_005274328 /// XM_005274329 /// XM_005274330 /// XM_005274331 /// XM_005274332 /// XM_005274333 /// XM_005274334 /// XM_005274335 /// XM_005274336 /// XM_005274337 /// XM_005274338 /// XM_005274340 /// XM_006718699 /// XM_006718700 /// XM_006718701 /// XM_006718702 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from mutant phenotype /// 0016188 // synaptic vesicle maturation // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from mutant phenotype /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0032880 // regulation of protein localization // inferred from direct assay /// 0035459 // cargo loading into vesicle // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0048261 // negative regulation of receptor-mediated endocytosis // inferred from direct assay /// 0048268 // clathrin coat assembly // inferred from mutant phenotype /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from mutant phenotype /// 0072583 // clathrin-mediated endocytosis // inferred from mutant phenotype /// 0097459 // iron ion import into cell // inferred from mutant phenotype /// 1901216 // positive regulation of neuron death // inferred from mutant phenotype /// 1902004 // positive regulation of beta-amyloid formation // inferred from mutant phenotype /// 1902959 // regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process // inferred from mutant phenotype /// 1902961 // positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process // inferred from sequence or structural similarity /// 1902963 // negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // inferred from direct assay /// 0030132 // clathrin coat of coated pit // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from sequence or structural similarity /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0097418 // neurofibrillary tangle // inferred from mutant phenotype </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from sequence or structural similarity /// 0030276 // clathrin binding // inferred from direct assay /// 0030276 // clathrin binding // inferred from physical interaction /// 0030276 // clathrin binding // inferred from sequence or structural similarity /// 0032050 // clathrin heavy chain binding // inferred from direct assay /// 0035615 // clathrin adaptor activity // inferred from mutant phenotype </td> <td> 106.13 </td> <td> 580.01 </td> <td> 1.74 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200838_at </td> <td> 200838_at </td> <td> NM_001908 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001908.1 /DEF=Homo sapiens cathepsin B (CTSB), mRNA. /FEA=mRNA /GEN=CTSB /PROD=cathepsin B /DB_XREF=gi:4503138 /UG=Hs.297939 cathepsin B /FL=gb:M14221.1 gb:L16510.1 gb:NM_001908.1 </td> <td> NM_001908 </td> <td> cathepsin B </td> <td> CTSB </td> <td> 1508 </td> <td> NM_001908 /// NM_147780 /// NM_147781 /// NM_147782 /// NM_147783 /// XM_006716244 /// XM_006716245 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0006508 // proteolysis // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from direct assay /// 0030574 // collagen catabolic process // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0042981 // regulation of apoptotic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from expression pattern </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005622 // intracellular // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0036021 // endolysosome lumen // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008233 // peptidase activity // inferred from direct assay /// 0008234 // cysteine-type peptidase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043394 // proteoglycan binding // inferred from physical interaction </td> <td> -85.90 </td> <td> 944.92 </td> <td> -1.74 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200870_at </td> <td> 200870_at </td> <td> NM_007178 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007178.1 /DEF=Homo sapiens unr-interacting protein (UNRIP), mRNA. /FEA=mRNA /GEN=UNRIP /PROD=unr-interacting protein /DB_XREF=gi:6005931 /UG=Hs.3727 unr-interacting protein /FL=gb:BC000162.1 gb:AB024327.1 gb:NM_007178.1 gb:AL136691.1 gb:AF161496.1 </td> <td> NM_007178 </td> <td> serine/threonine kinase receptor associated protein </td> <td> STRAP </td> <td> 11171 </td> <td> NM_007178 /// XM_005253294 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010633 // negative regulation of epithelial cell migration // inferred from mutant phenotype /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030277 // maintenance of gastrointestinal epithelium // inferred from mutant phenotype /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0060394 // negative regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0032797 // SMN complex // inferred from direct assay /// 0034719 // SMN-Sm protein complex // inferred from direct assay </td> <td> 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -72.05 </td> <td> 1059.90 </td> <td> -1.73 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 217747_s_at </td> <td> 217747_s_at </td> <td> NM_001013 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001013.1 /DEF=Homo sapiens ribosomal protein S9 (RPS9), mRNA. /FEA=mRNA /GEN=RPS9 /PROD=ribosomal protein S9 /DB_XREF=gi:4506744 /UG=Hs.180920 ribosomal protein S9 /FL=gb:BC000802.1 gb:NM_001013.1 gb:U14971.1 </td> <td> NM_001013 </td> <td> ribosomal protein S9 </td> <td> RPS9 </td> <td> 6203 </td> <td> NM_001013 /// XM_005259135 /// XM_005259136 /// XM_005277084 /// XM_005277085 /// XM_005277274 /// XM_005277315 /// XM_005277316 /// XM_005278287 /// XM_005278288 /// XM_006725876 /// XM_006725877 /// XM_006725964 /// XM_006725965 /// XM_006726063 /// XM_006726064 /// XM_006726164 /// XM_006726165 /// XM_006726201 /// XM_006726202 /// XR_243946 /// XR_243947 /// XR_254260 /// XR_254311 /// XR_254323 /// XR_254324 /// XR_254517 /// XR_254518 /// XR_430207 /// XR_430911 /// XR_430953 /// XR_430986 /// XR_430987 /// XR_430988 /// XR_431006 /// XR_431007 /// XR_431008 /// XR_431025 /// XR_431026 /// XR_431027 /// XR_431056 /// XR_431057 /// XR_431058 /// XR_431067 /// XR_431068 /// XR_431069 /// XR_431090 /// XR_431099 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006417 // regulation of translation // inferred from mutant phenotype /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from genetic interaction /// 0044267 // cellular protein metabolic process // traceable author statement /// 0072659 // protein localization to plasma membrane // inferred from sequence or structural similarity /// 0072659 // protein localization to plasma membrane // inferred from electronic annotation /// 1901741 // positive regulation of myoblast fusion // inferred from sequence or structural similarity /// 1901741 // positive regulation of myoblast fusion // inferred from electronic annotation /// 2001137 // positive regulation of endocytic recycling // inferred from sequence or structural similarity /// 2001137 // positive regulation of endocytic recycling // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0045182 // translation regulator activity // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -225.32 </td> <td> 1853.31 </td> <td> -1.73 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212765_at </td> <td> 212765_at </td> <td> AB029001 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB029001.1 /DEF=Homo sapiens mRNA for KIAA1078 protein, partial cds. /FEA=mRNA /GEN=KIAA1078 /PROD=KIAA1078 protein /DB_XREF=gi:5689492 /UG=Hs.23585 KIAA1078 protein </td> <td> AB029001 </td> <td> calmodulin regulated spectrin-associated protein family, member 2 </td> <td> CAMSAP2 </td> <td> 23271 </td> <td> NM_203459 /// XM_005245040 /// XM_005245041 /// XM_005245042 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0033043 // regulation of organelle organization // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0051011 // microtubule minus-end binding // inferred from direct assay </td> <td> -38.25 </td> <td> 287.32 </td> <td> -1.73 </td> <td> 0.12 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 202777_at </td> <td> 202777_at </td> <td> NM_007373 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007373.1 /DEF=Homo sapiens suppressor of clear, C. elegans, homolog of (SHOC2), mRNA.  /FEA=mRNA /GEN=SHOC2 /PROD=suppressor of clear, C. elegans, homolog of /DB_XREF=gi:6677944 /UG=Hs.104315 soc-2 (suppressor of clear, C.elegans) homolog /FL=gb:AF068920.1 gb:AF054828.1 gb:AB020669.1 gb:NM_007373.1 </td> <td> NM_007373 </td> <td> soc-2 suppressor of clear homolog (C. elegans) </td> <td> SHOC2 </td> <td> 8036 </td> <td> NM_001269039 /// NM_007373 </td> <td> 0007265 // Ras protein signal transduction // non-traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // non-traceable author statement /// 0046579 // positive regulation of Ras protein signal transduction // inferred from mutant phenotype /// 0050790 // regulation of catalytic activity // traceable author statement </td> <td> 0000164 // protein phosphatase type 1 complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0019888 // protein phosphatase regulator activity // traceable author statement /// 0019903 // protein phosphatase binding // inferred from direct assay </td> <td> -25.88 </td> <td> 250.81 </td> <td> -1.73 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208837_at </td> <td> 208837_at </td> <td> BC000027 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000027.1 /DEF=Homo sapiens, integral type I protein, clone MGC:1302, mRNA, complete cds.  /FEA=mRNA /PROD=integral type I protein /DB_XREF=gi:12652570 /UG=Hs.179516 integral type I protein /FL=gb:BC000027.1 gb:NM_007364.1 </td> <td> BC000027 </td> <td> transmembrane emp24 protein transport domain containing 3 </td> <td> TMED3 </td> <td> 23423 </td> <td> NM_007364 /// XM_005254263 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation </td> <td>  </td> <td> 48.32 </td> <td> 264.24 </td> <td> 1.73 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212058_at </td> <td> 212058_at </td> <td> AI184562 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI184562 /FEA=EST /DB_XREF=gi:3735200 /DB_XREF=est:qd60b05.x1 /CLONE=IMAGE:1733841 /UG=Hs.7976 KIAA0332 protein </td> <td> AI184562 </td> <td> U2 snRNP-associated SURP domain containing </td> <td> U2SURP </td> <td> 23350 </td> <td> NM_001080415 /// XM_005247246 /// XM_005247248 /// XM_005247249 </td> <td> 0006396 // RNA processing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -43.72 </td> <td> 362.81 </td> <td> -1.73 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212857_x_at </td> <td> 212857_x_at </td> <td> BG231551 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG231551 /FEA=EST /DB_XREF=gi:12726658 /DB_XREF=est:naf29h05.x1 /CLONE=IMAGE:4142457 /UG=Hs.74861 activated RNA polymerase II transcription cofactor 4 </td> <td> BG231551 </td> <td> SUB1 homolog (S. cerevisiae) </td> <td> SUB1 </td> <td> 10923 </td> <td> NM_006713 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 196.67 </td> <td> 957.66 </td> <td> 1.73 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200853_at </td> <td> 200853_at </td> <td> NM_002106 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002106.1 /DEF=Homo sapiens H2A histone family, member Z (H2AFZ), mRNA. /FEA=mRNA /GEN=H2AFZ /PROD=H2A histone family, member Z /DB_XREF=gi:4504254 /UG=Hs.119192 H2A histone family, member Z /FL=gb:M37583.1 gb:NM_002106.1 </td> <td> NM_002106 </td> <td> H2A histone family, member Z </td> <td> H2AFZ </td> <td> 3015 </td> <td> NM_002106 /// XM_005262971 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0071392 // cellular response to estradiol stimulus // inferred from mutant phenotype </td> <td> 0000786 // nucleosome // inferred from electronic annotation /// 0001740 // Barr body // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005720 // nuclear heterochromatin // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031490 // chromatin DNA binding // inferred from direct assay /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 150.65 </td> <td> 1269.42 </td> <td> 1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208846_s_at </td> <td> 208846_s_at </td> <td> U90943 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U90943.1 /DEF=Human voltage dependent anion channel form 3 mRNA, complete cds. /FEA=mRNA /PROD=voltage dependent anion channel form 3 /DB_XREF=gi:2735306 /UG=Hs.7381 voltage-dependent anion channel 3 /FL=gb:BC002456.1 gb:U90943.1 gb:AF038962.1 gb:NM_005662.1 </td> <td> U90943 </td> <td> voltage-dependent anion channel 3 </td> <td> VDAC3 </td> <td> 7419 </td> <td> NM_001135694 /// NM_005662 /// XM_006716394 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0015853 // adenine transport // traceable author statement /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0046930 // pore complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0008308 // voltage-gated anion channel activity // traceable author statement /// 0015288 // porin activity // inferred from electronic annotation </td> <td> 61.80 </td> <td> 207.03 </td> <td> 1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200089_s_at </td> <td> 200089_s_at </td> <td> AI953886 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI953886 /FEA=EST /DB_XREF=gi:5746196 /DB_XREF=est:wx70g02.x1 /CLONE=IMAGE:2549042 /UG=Hs.286 ribosomal protein L4 </td> <td> AI953886 </td> <td> ribosomal protein L4 /// small nucleolar RNA, C/D box 16 /// small nucleolar RNA, C/D box 18A /// small nucleolar RNA, C/D box 18B /// small nucleolar RNA, C/D box 18C </td> <td> RPL4 /// SNORD16 /// SNORD18A /// SNORD18B /// SNORD18C </td> <td> 6124 /// 595097 /// 595098 /// 595099 /// 595100 </td> <td> NM_000968 /// NR_002440 /// NR_002441 /// NR_002442 /// NR_002443 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -149.83 </td> <td> 1803.66 </td> <td> -1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200679_x_at </td> <td> 200679_x_at </td> <td> BE311760 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE311760 /FEA=EST /DB_XREF=gi:9148272 /DB_XREF=est:601143587F1 /CLONE=IMAGE:3507284 /UG=Hs.274472 high-mobility group (nonhistone chromosomal) protein 1 /FL=gb:BC003378.1 gb:NM_002128.1 gb:D63874.1 </td> <td> BE311760 </td> <td> high mobility group box 1 </td> <td> HMGB1 </td> <td> 3146 </td> <td> NM_002128 /// XM_005266363 /// XM_005266365 /// XM_005266368 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001773 // myeloid dendritic cell activation // inferred from sequence or structural similarity /// 0002407 // dendritic cell chemotaxis // inferred from sequence or structural similarity /// 0002437 // inflammatory response to antigenic stimulus // inferred from expression pattern /// 0006265 // DNA topological change // inferred from sequence or structural similarity /// 0006288 // base-excision repair, DNA ligation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006310 // DNA recombination // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0017055 // negative regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0033151 // V(D)J recombination // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050918 // positive chemotaxis // inferred from sequence or structural similarity /// 0051103 // DNA ligation involved in DNA repair // inferred from sequence or structural similarity /// 2000426 // negative regulation of apoptotic cell clearance // inferred from electronic annotation </td> <td> 0000793 // condensed chromosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from sequence or structural similarity /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008301 // DNA binding, bending // inferred from mutant phenotype /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0042056 // chemoattractant activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050786 // RAGE receptor binding // inferred from sequence or structural similarity /// 0070491 // repressing transcription factor binding // inferred from physical interaction </td> <td> -64.57 </td> <td> 564.89 </td> <td> -1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200919_at </td> <td> 200919_at </td> <td> NM_004427 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004427.1 /DEF=Homo sapiens early development regulator 2 (homolog of polyhomeotic 2) (EDR2), mRNA.  /FEA=mRNA /GEN=EDR2 /PROD=early development regulator 2 /DB_XREF=gi:4758241 /UG=Hs.75878 early development regulator 2 (homolog of polyhomeotic 2) /FL=gb:U89278.1 gb:NM_004427.1 </td> <td> NM_004427 </td> <td> polyhomeotic homolog 2 (Drosophila) </td> <td> PHC2 </td> <td> 1912 </td> <td> NM_004427 /// NM_198040 /// XM_005270568 /// XM_005270570 /// XM_005270571 /// XM_005270572 /// XM_006710401 /// XM_006710402 /// XM_006710403 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0031519 // PcG protein complex // inferred from direct assay /// 0035102 // PRC1 complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -67.05 </td> <td> 366.62 </td> <td> -1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201581_at </td> <td> 201581_at </td> <td> BF572868 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF572868 /FEA=EST /DB_XREF=gi:11646580 /DB_XREF=est:602079440F2 /CLONE=IMAGE:4254176 /UG=Hs.169358 hypothetical protein /FL=gb:NM_021156.1 </td> <td> BF572868 </td> <td> thioredoxin-related transmembrane protein 4 </td> <td> TMX4 </td> <td> 56255 </td> <td> NM_021156 </td> <td> 0006457 // protein folding // not recorded /// 0034976 // response to endoplasmic reticulum stress // not recorded /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003756 // protein disulfide isomerase activity // not recorded </td> <td> 21.65 </td> <td> 132.25 </td> <td> 1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200001_at </td> <td> 200001_at </td> <td> NM_001749 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001749.1 /DEF=Homo sapiens calpain 4, small subunit (30K) (CAPN4), mRNA. /FEA=mRNA /GEN=CAPN4 /PROD=calpain 4 small subunit /DB_XREF=gi:4502564 /UG=Hs.74451 calpain 4, small subunit (30K) /FL=gb:BC000592.1 gb:NM_001749.1 </td> <td> NM_001749 </td> <td> calpain, small subunit 1 </td> <td> CAPNS1 </td> <td> 826 </td> <td> NM_001003962 /// NM_001749 /// XM_005259295 /// XM_005259296 /// XM_005259297 </td> <td> 0006508 // proteolysis // not recorded /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement </td> <td> 0005737 // cytoplasm // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004198 // calcium-dependent cysteine-type endopeptidase activity // not recorded /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -135.22 </td> <td> 1063.69 </td> <td> -1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 215596_s_at </td> <td> 215596_s_at </td> <td> AL163248 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL163248 /DEF=Homo sapiens chromosome 21 segment HS21C048 /FEA=mRNA_2 /DB_XREF=gi:7717304 /UG=Hs.288773 zinc finger protein 294 </td> <td> AL163248 </td> <td> listerin E3 ubiquitin protein ligase 1 </td> <td> LTN1 </td> <td> 26046 </td> <td> NM_015565 /// XM_006723987 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from electronic annotation </td> <td>  </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 27.85 </td> <td> 160.85 </td> <td> 1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 203282_at </td> <td> 203282_at </td> <td> NM_000158 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000158.1 /DEF=Homo sapiens glucan (1,4-alpha-), branching enzyme 1 (glycogen branching enzyme, Andersen disease, glycogen storage disease type IV) (GBE1), mRNA.  /FEA=mRNA /GEN=GBE1 /PROD=glucan (1,4-alpha-), branching enzyme 1(glycogen branching enzyme) /DB_XREF=gi:4557618 /UG=Hs.1691 glucan (1,4-alpha-), branching enzyme 1 (glycogen branching enzyme, Andersen disease, glycogen storage disease type IV) /FL=gb:L07956.1 gb:NM_000158.1 </td> <td> NM_000158 </td> <td> glucan (1,4-alpha-), branching enzyme 1 </td> <td> GBE1 </td> <td> 2632 </td> <td> NM_000158 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // traceable author statement /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0003844 // 1,4-alpha-glucan branching enzyme activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation </td> <td> 38.15 </td> <td> 816.52 </td> <td> 1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 202189_x_at </td> <td> 202189_x_at </td> <td> NM_002819 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002819.1 /DEF=Homo sapiens polypyrimidine tract binding protein (heterogeneous nuclear ribonucleoprotein I) (PTB), mRNA.  /FEA=mRNA /GEN=PTB /PROD=polypyrimidine tract binding protein(heterogeneous nuclear ribonucleoprotein I) /DB_XREF=gi:4506242 /UG=Hs.172550 polypyrimidine tract binding protein (heterogeneous nuclear ribonucleoprotein I) /FL=gb:NM_002819.1 </td> <td> NM_002819 </td> <td> microRNA 4745 /// polypyrimidine tract binding protein 1 </td> <td> MIR4745 /// PTBP1 </td> <td> 5725 /// 100616459 </td> <td> NM_002819 /// NM_031990 /// NM_031991 /// NM_175847 /// NR_039900 /// XM_005259597 /// XM_005259598 /// XR_244034 /// XR_244035 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0051148 // negative regulation of muscle cell differentiation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008187 // poly-pyrimidine tract binding // traceable author statement /// 0036002 // pre-mRNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 87.85 </td> <td> 730.40 </td> <td> 1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201799_s_at </td> <td> 201799_s_at </td> <td> AI927993 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI927993 /FEA=EST /DB_XREF=gi:5663957 /DB_XREF=est:wo92c11.x1 /CLONE=IMAGE:2462804 /UG=Hs.24734 oxysterol binding protein /FL=gb:AF185696.1 gb:M86917.1 gb:NM_002556.1 </td> <td> AI927993 </td> <td> oxysterol binding protein </td> <td> OSBP </td> <td> 5007 </td> <td> NM_002556 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay </td> <td> 0005543 // phospholipid binding // inferred from electronic annotation /// 0008142 // oxysterol binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation </td> <td> -32.45 </td> <td> 128.08 </td> <td> -1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 210428_s_at </td> <td> 210428_s_at </td> <td> AF260566 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF260566.1 /DEF=Homo sapiens hepatocyte growth factor-regulated tyrosine kinase substrate HRS isoform 2 (HRS) mRNA, complete cds.  /FEA=mRNA /GEN=HRS /PROD=hepatocyte growth factor-regulated tyrosinekinase substrate HRS isoform 2 /DB_XREF=gi:9022388 /UG=Hs.24756 hepatocyte growth factor-regulated tyrosine kinase substrate /FL=gb:AF260566.1 </td> <td> AF260566 </td> <td> hepatocyte growth factor-regulated tyrosine kinase substrate </td> <td> HGS </td> <td> 9146 </td> <td> NM_004712 /// XM_005257794 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0008333 // endosome to lysosome transport // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042176 // regulation of protein catabolic process // traceable author statement /// 0046426 // negative regulation of JAK-STAT cascade // inferred from direct assay /// 0061024 // membrane organization // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0032585 // multivesicular body membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 40.80 </td> <td> 357.88 </td> <td> 1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212352_s_at </td> <td> 212352_s_at </td> <td> BE780075 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE780075 /FEA=EST /DB_XREF=gi:10201273 /DB_XREF=est:601469954F1 /CLONE=IMAGE:3873157 /UG=Hs.74137 transmembrane trafficking protein </td> <td> BE780075 </td> <td> transmembrane emp24-like trafficking protein 10 (yeast) </td> <td> TMED10 </td> <td> 10972 </td> <td> NM_006827 </td> <td> 0001101 // response to acid // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from direct assay /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from sequence or structural similarity /// 0007030 // Golgi organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0034205 // beta-amyloid formation // inferred from mutant phenotype /// 0035459 // cargo loading into vesicle // traceable author statement /// 0035964 // COPI-coated vesicle budding // inferred from direct assay /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0045055 // regulated secretory pathway // inferred from sequence or structural similarity /// 0048199 // vesicle targeting, to, from or within Golgi // inferred from sequence or structural similarity /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0051259 // protein oligomerization // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from direct assay /// 0000139 // Golgi membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005801 // cis-Golgi network // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from sequence or structural similarity /// 0030137 // COPI-coated vesicle // inferred from sequence or structural similarity /// 0030140 // trans-Golgi network transport vesicle // inferred from sequence or structural similarity /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0030667 // secretory granule membrane // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042589 // zymogen granule membrane // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070765 // gamma-secretase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019905 // syntaxin binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> 72.20 </td> <td> 832.00 </td> <td> 1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 209044_x_at </td> <td> 209044_x_at </td> <td> BC004273 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004273.1 /DEF=Homo sapiens, splicing factor 3b, subunit 4, 49kD, clone MGC:10828, mRNA, complete cds.  /FEA=mRNA /PROD=splicing factor 3b, subunit 4, 49kD /DB_XREF=gi:13279088 /UG=Hs.25797 splicing factor 3b, subunit 4, 49kD /FL=gb:BC004273.1 gb:NM_005850.1 </td> <td> BC004273 </td> <td> splicing factor 3b, subunit 4, 49kDa </td> <td> SF3B4 </td> <td> 10262 </td> <td> NM_005850 /// XM_005277331 </td> <td> 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 35.15 </td> <td> 181.80 </td> <td> 1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208191_x_at </td> <td> 208191_x_at </td> <td> NM_002780 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002780.1 /DEF=Homo sapiens pregnancy specific beta-1-glycoprotein 4 (PSG4), mRNA. /FEA=mRNA /GEN=PSG4 /PROD=pregnancy specific beta-1-glycoprotein 4 /DB_XREF=gi:4506170 /UG=Hs.278423 pregnancy specific beta-1-glycoprotein 4 /FL=gb:NM_002780.1 gb:U18469.1 </td> <td> NM_002780 </td> <td> pregnancy specific beta-1-glycoprotein 4 </td> <td> PSG4 </td> <td> 5672 </td> <td> NM_001276495 /// NM_002780 /// NM_213633 /// XM_005259069 /// XM_005259073 </td> <td> 0006952 // defense response // non-traceable author statement /// 0007565 // female pregnancy // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 30.38 </td> <td> 76.01 </td> <td> 1.72 </td> <td> 0.13 </td> <td> 0.18 </td> <td> -4.56 </td> </tr>
  <tr> <td> 217788_s_at </td> <td> 217788_s_at </td> <td> NM_004481 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004481.2 /DEF=Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) (GALNT2), mRNA.  /FEA=mRNA /GEN=GALNT2 /PROD=polypeptide N-acetylgalactosaminyltransferase 2 /DB_XREF=gi:9945385 /UG=Hs.130181 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) /FL=gb:NM_004481.2 </td> <td> NM_004481 </td> <td> polypeptide N-acetylgalactosaminyltransferase 2 </td> <td> GALNT2 </td> <td> 2590 </td> <td> NM_001291866 /// NM_004481 /// NR_120373 </td> <td> 0002378 // immunoglobulin biosynthetic process // inferred from direct assay /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006493 // protein O-linked glycosylation // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0018242 // protein O-linked glycosylation via serine // inferred from direct assay /// 0018243 // protein O-linked glycosylation via threonine // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005795 // Golgi stack // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030173 // integral component of Golgi membrane // non-traceable author statement /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 57.90 </td> <td> 415.35 </td> <td> 1.71 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 218539_at </td> <td> 218539_at </td> <td> NM_017943 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017943.1 /DEF=Homo sapiens hypothetical protein FLJ20725 (FLJ20725), mRNA. /FEA=mRNA /GEN=FLJ20725 /PROD=hypothetical protein FLJ20725 /DB_XREF=gi:8923650 /UG=Hs.15467 hypothetical protein FLJ20725 /FL=gb:NM_017943.1 </td> <td> NM_017943 </td> <td> F-box protein 34 </td> <td> FBXO34 </td> <td> 55030 </td> <td> NM_017943 /// NM_152231 /// XM_005267791 /// XM_006720185 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 25.50 </td> <td> 180.93 </td> <td> 1.71 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 206918_s_at </td> <td> 206918_s_at </td> <td> NM_003915 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003915.1 /DEF=Homo sapiens copine I (CPNE1), mRNA. /FEA=mRNA /GEN=CPNE1 /PROD=copine I /DB_XREF=gi:4503012 /UG=Hs.166887 copine I /FL=gb:U83246.1 gb:NM_003915.1 </td> <td> NM_003915 </td> <td> copine I </td> <td> CPNE1 </td> <td> 8904 </td> <td> NM_001198863 /// NM_003915 /// NM_152925 /// NM_152926 /// NM_152927 /// NM_152928 /// NM_152930 /// NM_152931 /// NR_037188 </td> <td> 0006629 // lipid metabolic process // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001786 // phosphatidylserine binding // inferred from direct assay /// 0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // traceable author statement </td> <td> -28.20 </td> <td> 202.80 </td> <td> -1.71 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200830_at </td> <td> 200830_at </td> <td> NM_002808 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002808.1 /DEF=Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 (PSMD2), mRNA.  /FEA=mRNA /GEN=PSMD2 /PROD=proteasome (prosome, macropain) 26S subunit,non-ATPase, 2 /DB_XREF=gi:4506226 /UG=Hs.74619 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 /FL=gb:D78151.1 gb:BC002368.1 gb:BC002997.1 gb:NM_002808.1 gb:U18247.1 gb:U12596.1 </td> <td> NM_002808 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 </td> <td> PSMD2 </td> <td> 5708 </td> <td> NM_001278708 /// NM_001278709 /// NM_002808 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005838 // proteasome regulatory particle // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030234 // enzyme regulator activity // inferred from electronic annotation </td> <td> 106.75 </td> <td> 647.80 </td> <td> 1.71 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 202275_at </td> <td> 202275_at </td> <td> NM_000402 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000402.1 /DEF=Homo sapiens glucose-6-phosphate dehydrogenase (G6PD), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=G6PD /PROD=glucose-6-phosphate dehydrogenase /DB_XREF=gi:4503844 /UG=Hs.80206 glucose-6-phosphate dehydrogenase /FL=gb:BC000337.1 gb:M21248.1 gb:NM_000402.1 </td> <td> NM_000402 </td> <td> glucose-6-phosphate dehydrogenase </td> <td> G6PD </td> <td> 2539 </td> <td> NM_000402 /// NM_001042351 /// XM_005274657 /// XM_005274658 </td> <td> 0001816 // cytokine production // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006098 // pentose-phosphate shunt // inferred from direct assay /// 0006098 // pentose-phosphate shunt // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0006695 // cholesterol biosynthetic process // inferred from mutant phenotype /// 0006739 // NADP metabolic process // inferred from direct assay /// 0006740 // NADPH regeneration // inferred from mutant phenotype /// 0006749 // glutathione metabolic process // inferred from mutant phenotype /// 0009051 // pentose-phosphate shunt, oxidative branch // inferred from mutant phenotype /// 0010734 // negative regulation of protein glutathionylation // inferred from mutant phenotype /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019322 // pentose biosynthetic process // inferred from direct assay /// 0021762 // substantia nigra development // inferred from expression pattern /// 0032094 // response to food // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from mutant phenotype /// 0043249 // erythrocyte maturation // inferred from mutant phenotype /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046390 // ribose phosphate biosynthetic process // inferred from mutant phenotype /// 0051156 // glucose 6-phosphate metabolic process // inferred from direct assay /// 0051156 // glucose 6-phosphate metabolic process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0009898 // cytoplasmic side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004345 // glucose-6-phosphate dehydrogenase activity // inferred from direct assay /// 0004345 // glucose-6-phosphate dehydrogenase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005536 // glucose binding // inferred from direct assay /// 0005536 // glucose binding // inferred from mutant phenotype /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0050661 // NADP binding // inferred from direct assay </td> <td> -32.55 </td> <td> 209.57 </td> <td> -1.71 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 210427_x_at </td> <td> 210427_x_at </td> <td> BC001388 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001388.1 /DEF=Homo sapiens, annexin A2, clone MGC:2257, mRNA, complete cds. /FEA=mRNA /PROD=annexin A2 /DB_XREF=gi:12655074 /UG=Hs.217493 annexin A2 /FL=gb:BC001388.1 </td> <td> BC001388 </td> <td> annexin A2 </td> <td> ANXA2 </td> <td> 302 </td> <td> NM_001002857 /// NM_001002858 /// NM_001136015 /// NM_004039 </td> <td> 0001525 // angiogenesis // inferred from expression pattern /// 0001765 // membrane raft assembly // inferred from mutant phenotype /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006900 // membrane budding // inferred from mutant phenotype /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0031340 // positive regulation of vesicle fusion // inferred from direct assay /// 0036035 // osteoclast development // inferred from direct assay /// 0042730 // fibrinolysis // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0051099 // positive regulation of binding // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from direct assay /// 0071229 // cellular response to acid // inferred from electronic annotation /// 0072661 // protein targeting to plasma membrane // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019897 // extrinsic component of plasma membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031902 // late endosome membrane // inferred from direct assay /// 0031982 // vesicle // inferred from electronic annotation /// 0035749 // myelin sheath adaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044354 // macropinosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from mutant phenotype /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0019834 // phospholipase A2 inhibitor activity // inferred from direct assay /// 0044548 // S100 protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> -569.70 </td> <td> 4067.20 </td> <td> -1.71 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 203109_at </td> <td> 203109_at </td> <td> NM_003969 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003969.1 /DEF=Homo sapiens ubiquitin-conjugating enzyme E2M (homologous to yeast UBC12) (UBE2M), mRNA.  /FEA=mRNA /GEN=UBE2M /PROD=ubiquitin-conjugating enzyme E2M (homologous toyeast UBC12) /DB_XREF=gi:4507790 /UG=Hs.200478 ubiquitin-conjugating enzyme E2M (homologous to yeast UBC12) /FL=gb:AF075599.1 gb:AB012191.1 gb:NM_003969.1 </td> <td> NM_003969 </td> <td> ubiquitin-conjugating enzyme E2M </td> <td> UBE2M </td> <td> 9040 </td> <td> NM_003969 </td> <td> 0006464 // cellular protein modification process // inferred from mutant phenotype /// 0006464 // cellular protein modification process // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0016567 // protein ubiquitination // traceable author statement /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045116 // protein neddylation // inferred from direct assay /// 0045116 // protein neddylation // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0018169 // ribosomal S6-glutamic acid ligase activity // inferred from direct assay /// 0019788 // NEDD8 ligase activity // inferred from direct assay </td> <td> -52.25 </td> <td> 216.80 </td> <td> -1.71 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 205849_s_at </td> <td> 205849_s_at </td> <td> NM_006294 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006294.1 /DEF=Homo sapiens ubiquinol-cytochrome c reductase binding protein (UQCRB), mRNA.  /FEA=mRNA /GEN=UQCRB /PROD=ubiquinol-cytochrome c reductase bindingprotein /DB_XREF=gi:5454151 /UG=Hs.131255 ubiquinol-cytochrome c reductase binding protein /FL=gb:M22348.1 gb:NM_006294.1 </td> <td> NM_006294 </td> <td> ubiquinol-cytochrome c reductase binding protein </td> <td> UQCRB </td> <td> 7381 </td> <td> NM_001199975 /// NM_001254752 /// NM_006294 /// NR_045639 /// XM_006716652 </td> <td> 0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td>  </td> <td> 139.15 </td> <td> 1125.35 </td> <td> 1.71 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201597_at </td> <td> 201597_at </td> <td> NM_001865 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001865.1 /DEF=Homo sapiens cytochrome c oxidase subunit VIIa polypeptide 2 (liver) (COX7A2), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=COX7A2 /PROD=cytochrome c oxidase subunit VIIa polypeptide 2(liver) /DB_XREF=gi:4502988 /UG=Hs.70312 cytochrome c oxidase subunit VIIa polypeptide 2 (liver) /FL=gb:NM_001865.1 </td> <td> NM_001865 </td> <td> cytochrome c oxidase subunit VIIa polypeptide 2 (liver) </td> <td> COX7A2 </td> <td> 1347 </td> <td> NM_001865 /// NR_029466 /// XM_006715335 </td> <td> 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation </td> <td> 155.67 </td> <td> 1194.19 </td> <td> 1.70 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 221958_s_at </td> <td> 221958_s_at </td> <td> AA775681 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA775681 /FEA=EST /DB_XREF=gi:2835015 /DB_XREF=est:zf31a02.s1 /CLONE=IMAGE:378506 /UG=Hs.250746 hypothetical protein FLJ23091 </td> <td> AA775681 </td> <td> wntless Wnt ligand secretion mediator </td> <td> WLS </td> <td> 79971 </td> <td> NM_001002292 /// NM_001193334 /// NM_024911 </td> <td> 0001707 // mesoderm formation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009948 // anterior/posterior axis specification // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0031937 // positive regulation of chromatin silencing // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from electronic annotation </td> <td> 39.22 </td> <td> 227.96 </td> <td> 1.70 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 207791_s_at </td> <td> 207791_s_at </td> <td> NM_004161 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004161.1 /DEF=Homo sapiens RAB1, member RAS oncogene family (RAB1), mRNA. /FEA=mRNA /GEN=RAB1 /PROD=RAB1, member RAS oncogene family /DB_XREF=gi:4758987 /UG=Hs.3642 RAB1, member RAS oncogene family /FL=gb:NM_004161.1 gb:M28209.1 </td> <td> NM_004161 </td> <td> RAB1A, member RAS oncogene family </td> <td> RAB1A </td> <td> 5861 </td> <td> NM_004161 /// NM_015543 /// XM_005264468 </td> <td> 0000045 // autophagic vacuole assembly // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0030252 // growth hormone secretion // inferred from mutant phenotype /// 0042742 // defense response to bacterium // inferred from mutant phenotype /// 0047496 // vesicle transport along microtubule // inferred from mutant phenotype /// 0072606 // interleukin-8 secretion // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 37.50 </td> <td> 289.43 </td> <td> 1.70 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212530_at </td> <td> 212530_at </td> <td> AL080111 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL080111.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586G2222 (from clone DKFZp586G2222). /FEA=mRNA /DB_XREF=gi:5262538 /UG=Hs.24119 Homo sapiens mRNA; cDNA DKFZp586G2222 (from clone DKFZp586G2222) </td> <td> AL080111 </td> <td> NIMA-related kinase 7 </td> <td> NEK7 </td> <td> 140609 </td> <td> NM_133494 </td> <td> 0000910 // cytokinesis // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007346 // regulation of mitotic cell cycle // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051225 // spindle assembly // traceable author statement </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 28.92 </td> <td> 236.74 </td> <td> 1.70 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 202806_at </td> <td> 202806_at </td> <td> NM_004395 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004395.1 /DEF=Homo sapiens drebrin 1 (DBN1), mRNA. /FEA=mRNA /GEN=DBN1 /PROD=drebrin 1 /DB_XREF=gi:4758123 /UG=Hs.89434 drebrin 1 /FL=gb:BC000283.1 gb:U00802.1 gb:NM_004395.1 gb:D17530.1 </td> <td> NM_004395 </td> <td> drebrin 1 </td> <td> DBN1 </td> <td> 1627 </td> <td> NM_004395 /// NM_080881 /// XM_005265827 /// XM_005265828 /// XM_005265829 /// XM_006714826 </td> <td> 0007015 // actin filament organization // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0010643 // cell communication by chemical coupling // inferred from electronic annotation /// 0010644 // cell communication by electrical coupling // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032507 // maintenance of protein location in cell // inferred from electronic annotation /// 0048168 // regulation of neuronal synaptic plasticity // non-traceable author statement /// 0048699 // generation of neurons // inferred from electronic annotation /// 0050773 // regulation of dendrite development // non-traceable author statement /// 0061351 // neural precursor cell proliferation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // non-traceable author statement /// 0042641 // actomyosin // non-traceable author statement </td> <td> 0003779 // actin binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005522 // profilin binding // inferred from sequence or structural similarity </td> <td> 98.00 </td> <td> 298.77 </td> <td> 1.70 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 207469_s_at </td> <td> 207469_s_at </td> <td> NM_003662 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003662.1 /DEF=Homo sapiens Pirin (PIR), mRNA. /FEA=mRNA /GEN=PIR /PROD=pirin /DB_XREF=gi:4505822 /UG=Hs.279663 Pirin /FL=gb:NM_003662.1 </td> <td> NM_003662 </td> <td> pirin (iron-binding nuclear protein) </td> <td> PIR </td> <td> 8544 </td> <td> NM_001018109 /// NM_003662 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003712 // transcription cofactor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008127 // quercetin 2,3-dioxygenase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from direct assay /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> 52.15 </td> <td> 340.02 </td> <td> 1.70 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200871_s_at </td> <td> 200871_s_at </td> <td> NM_002778 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002778.1 /DEF=Homo sapiens prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) (PSAP), mRNA.  /FEA=mRNA /GEN=PSAP /PROD=prosaposin (variant Gaucher disease and variantmetachromatic leukodystrophy) /DB_XREF=gi:11386146 /UG=Hs.78575 prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) /FL=gb:NM_002778.1 gb:BC004275.1 gb:J03077.1 gb:D00422.1 gb:M60255.1 gb:M32221.1 gb:M60257.1 gb:M60258.1 gb:M81355.1 </td> <td> NM_002778 </td> <td> prosaposin </td> <td> PSAP </td> <td> 5660 </td> <td> NM_001042465 /// NM_001042466 /// NM_002778 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0006869 // lipid transport // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0019216 // regulation of lipid metabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0043408 // regulation of MAPK cascade // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048589 // developmental growth // inferred from electronic annotation /// 0060736 // prostate gland growth // inferred from electronic annotation /// 0060742 // epithelial cell differentiation involved in prostate gland development // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016021 // integral component of membrane // traceable author statement /// 0043202 // lysosomal lumen // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // traceable author statement /// 0008289 // lipid binding // traceable author statement </td> <td> -365.67 </td> <td> 1158.19 </td> <td> -1.70 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212386_at </td> <td> 212386_at </td> <td> BF592782 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF592782 /FEA=EST /DB_XREF=gi:11685106 /DB_XREF=est:7j94d06.x1 /CLONE=IMAGE:3442594 /UG=Hs.289068 Homo sapiens cDNA FLJ11918 fis, clone HEMBB1000272 </td> <td> BF592782 </td> <td> transcription factor 4 </td> <td> TCF4 </td> <td> 6925 </td> <td> NM_001083962 /// NM_001243226 /// NM_001243227 /// NM_001243228 /// NM_001243230 /// NM_001243231 /// NM_001243232 /// NM_001243233 /// NM_001243234 /// NM_001243235 /// NM_001243236 /// NM_003199 /// XM_005266739 /// XM_005266741 /// XM_005266743 /// XM_005266744 /// XM_005266745 /// XM_005266746 /// XM_005266747 /// XM_005266749 /// XM_005266750 /// XM_005266752 /// XM_005266754 /// XM_005266755 /// XM_005266761 /// XM_006722529 /// XM_006722530 /// XM_006722531 /// XM_006722532 /// XM_006722533 /// XM_006722534 /// XM_006722535 /// XM_006722536 /// XM_006722537 /// XM_006722538 /// XM_006722539 /// XM_006722540 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006352 // DNA-templated transcription, initiation // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from sequence or structural similarity </td> <td> -129.95 </td> <td> 942.98 </td> <td> -1.70 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 219436_s_at </td> <td> 219436_s_at </td> <td> NM_016242 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016242.1 /DEF=Homo sapiens endomucin-2 (LOC51705), mRNA. /FEA=mRNA /GEN=LOC51705 /PROD=endomucin-2 /DB_XREF=gi:7706452 /UG=Hs.41135 endomucin-2 /FL=gb:AB034695.1 gb:NM_016242.1 gb:AF205940.1 </td> <td> NM_016242 </td> <td> endomucin </td> <td> EMCN </td> <td> 51705 </td> <td> NM_001159694 /// NM_016242 /// XM_005263059 /// XM_005263061 </td> <td> 0001525 // angiogenesis // inferred from expression pattern /// 0016337 // single organismal cell-cell adhesion // inferred from direct assay /// 0030155 // regulation of cell adhesion // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred by curator /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0030246 // carbohydrate binding // inferred from direct assay </td> <td> 40.70 </td> <td> 300.55 </td> <td> 1.70 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201078_at </td> <td> 201078_at </td> <td> NM_004800 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004800.1 /DEF=Homo sapiens transmembrane 9 superfamily member 2 (TM9SF2), mRNA. /FEA=mRNA /GEN=TM9SF2 /PROD=transmembrane 9 superfamily member 2 /DB_XREF=gi:4758873 /UG=Hs.28757 transmembrane 9 superfamily member 2 /FL=gb:U81006.1 gb:NM_004800.1 </td> <td> NM_004800 </td> <td> transmembrane 9 superfamily member 2 </td> <td> TM9SF2 </td> <td> 9375 </td> <td> NM_004800 </td> <td> 0006810 // transport // traceable author statement </td> <td> 0005768 // endosome // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> 107.95 </td> <td> 708.30 </td> <td> 1.70 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200817_x_at </td> <td> 200817_x_at </td> <td> NM_001014 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001014.1 /DEF=Homo sapiens ribosomal protein S10 (RPS10), mRNA. /FEA=mRNA /GEN=RPS10 /PROD=ribosomal protein S10 /DB_XREF=gi:4506678 /UG=Hs.76230 ribosomal protein S10 /FL=gb:BC001032.1 gb:BC001955.1 gb:BC005012.1 gb:NM_001014.1 gb:U14972.1 </td> <td> NM_001014 </td> <td> ribosomal protein S10 </td> <td> RPS10 </td> <td> 6204 </td> <td> NM_001014 /// NM_001203245 /// NM_001204091 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -868.27 </td> <td> 5111.46 </td> <td> -1.70 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 212662_at </td> <td> 212662_at </td> <td> BE615277 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE615277 /FEA=EST /DB_XREF=gi:9896876 /DB_XREF=est:601280637F1 /CLONE=IMAGE:3622736 /UG=Hs.171844 Homo sapiens cDNA: FLJ22296 fis, clone HRC04468 </td> <td> BE615277 </td> <td> poliovirus receptor </td> <td> PVR </td> <td> 5817 </td> <td> NM_001135768 /// NM_001135769 /// NM_001135770 /// NM_006505 /// XM_005259120 </td> <td> 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0045216 // cell-cell junction organization // traceable author statement /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0060370 // susceptibility to T cell mediated cytotoxicity // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction </td> <td> -35.72 </td> <td> 133.39 </td> <td> -1.69 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201526_at </td> <td> 201526_at </td> <td> NM_001662 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001662.2 /DEF=Homo sapiens ADP-ribosylation factor 5 (ARF5), mRNA. /FEA=mRNA /GEN=ARF5 /PROD=ADP-ribosylation factor 5 /DB_XREF=gi:6995999 /UG=Hs.77541 ADP-ribosylation factor 5 /FL=gb:BC003043.1 gb:M57567.1 gb:NM_001662.2 </td> <td> NM_001662 </td> <td> ADP-ribosylation factor 5 </td> <td> ARF5 </td> <td> 381 </td> <td> NM_001662 </td> <td> 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation </td> <td> 38.83 </td> <td> 274.79 </td> <td> 1.69 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 202025_x_at </td> <td> 202025_x_at </td> <td> NM_001607 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001607.2 /DEF=Homo sapiens acetyl-Coenzyme A acyltransferase 1 (peroxisomal 3-oxoacyl-Coenzyme A thiolase) (ACAA1), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=ACAA1 /PROD=acetyl-Coenzyme A acyltransferase 1 /DB_XREF=gi:6598316 /UG=Hs.166160 acetyl-Coenzyme A acyltransferase 1 (peroxisomal 3-oxoacyl-Coenzyme A thiolase) /FL=gb:BC000635.1 gb:NM_001607.2 </td> <td> NM_001607 </td> <td> acetyl-CoA acyltransferase 1 </td> <td> ACAA1 </td> <td> 30 </td> <td> NM_001130410 /// NM_001607 /// NR_024024 /// XM_006713122 /// XM_006713123 </td> <td> 0000038 // very long-chain fatty acid metabolic process // inferred from mutant phenotype /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // inferred from mutant phenotype /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0033559 // unsaturated fatty acid metabolic process // traceable author statement /// 0036109 // alpha-linolenic acid metabolic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005777 // peroxisome // inferred from direct assay /// 0005782 // peroxisomal matrix // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0003988 // acetyl-CoA C-acyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016401 // palmitoyl-CoA oxidase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation </td> <td> 20.23 </td> <td> 97.34 </td> <td> 1.69 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 207980_s_at </td> <td> 207980_s_at </td> <td> NM_006079 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006079.1 /DEF=Homo sapiens Cbpp300-interacting transactivator, with GluAsp-rich carboxy-terminal domain, 2 (CITED2), mRNA.  /FEA=mRNA /GEN=CITED2 /PROD=Cbpp300-interacting transactivator, withGluAsp-rich carboxy-terminal domain, 2 /DB_XREF=gi:5174416 /UG=Hs.82071 Cbpp300-interacting transactivator, with GluAsp-rich carboxy-terminal domain, 2 /FL=gb:U65093.1 gb:NM_006079.1 </td> <td> NM_006079 </td> <td> Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 </td> <td> CITED2 </td> <td> 10370 </td> <td> NM_001168388 /// NM_001168389 /// NM_006079 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from direct assay /// 0001666 // response to hypoxia // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001829 // trophectodermal cell differentiation // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001889 // liver development // inferred from sequence or structural similarity /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002089 // lens morphogenesis in camera-type eye // inferred from electronic annotation /// 0002244 // hematopoietic progenitor cell differentiation // inferred from electronic annotation /// 0002521 // leukocyte differentiation // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003156 // regulation of organ formation // inferred from sequence or structural similarity /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007530 // sex determination // inferred from sequence or structural similarity /// 0007569 // cell aging // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0008584 // male gonad development // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0021602 // cranial nerve morphogenesis // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0030851 // granulocyte differentiation // inferred from electronic annotation /// 0034405 // response to fluid shear stress // inferred from mutant phenotype /// 0035360 // positive regulation of peroxisome proliferator activated receptor signaling pathway // inferred from direct assay /// 0035802 // adrenal cortex formation // inferred from sequence or structural similarity /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043627 // response to estrogen // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046697 // decidualization // inferred from electronic annotation /// 0048536 // spleen development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0060136 // embryonic process involved in female pregnancy // inferred from electronic annotation /// 0060349 // bone morphogenesis // inferred from electronic annotation /// 0060411 // cardiac septum morphogenesis // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060971 // embryonic heart tube left/right pattern formation // inferred from sequence or structural similarity /// 0061156 // pulmonary artery morphogenesis // inferred from electronic annotation /// 0061308 // cardiac neural crest cell development involved in heart development // inferred from electronic annotation /// 0061371 // determination of heart left/right asymmetry // inferred from electronic annotation /// 0061428 // negative regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from direct assay /// 0070986 // left/right axis specification // inferred from sequence or structural similarity /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 1900164 // nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry // inferred from sequence or structural similarity /// 2000020 // positive regulation of male gonad development // inferred from sequence or structural similarity /// 2001141 // regulation of RNA biosynthetic process // inferred from direct assay </td> <td> 0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from mutant phenotype </td> <td> 0001102 // RNA polymerase II activating transcription factor binding // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0035035 // histone acetyltransferase binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0050693 // LBD domain binding // inferred from physical interaction </td> <td> -38.60 </td> <td> 124.10 </td> <td> -1.69 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 49878_at </td> <td> 49878_at </td> <td> AA523441 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AA523441:ng30d08.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-936303 /clone_end=3' /gb=AA523441 /gi=2264153 /ug=Hs.100915 /len=594 </td> <td> AA523441 </td> <td> peroxisomal biogenesis factor 16 </td> <td> PEX16 </td> <td> 9409 </td> <td> NM_004813 /// NM_057174 </td> <td> 0006625 // protein targeting to peroxisome // inferred from mutant phenotype /// 0007031 // peroxisome organization // inferred from mutant phenotype /// 0016557 // peroxisome membrane biogenesis // inferred from mutant phenotype /// 0016558 // protein import into peroxisome matrix // inferred from mutant phenotype /// 0022615 // protein to membrane docking // inferred from direct assay /// 0032581 // ER-dependent peroxisome organization // inferred from direct assay /// 0045046 // protein import into peroxisome membrane // inferred from mutant phenotype /// 0070972 // protein localization to endoplasmic reticulum // inferred from direct assay </td> <td> 0005777 // peroxisome // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005779 // integral component of peroxisomal membrane // inferred from direct assay /// 0005779 // integral component of peroxisomal membrane // inferred from mutant phenotype /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction </td> <td> -20.93 </td> <td> 197.99 </td> <td> -1.69 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200653_s_at </td> <td> 200653_s_at </td> <td> M27319 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M27319.1 /DEF=Human calmodulin mRNA, complete cds. /FEA=mRNA /PROD=calmodulin /DB_XREF=gi:179809 /UG=Hs.177656 calmodulin 1 (phosphorylase kinase, delta) /FL=gb:M27319.1 gb:NM_006888.1 </td> <td> M27319 </td> <td> calmodulin 1 (phosphorylase kinase, delta) /// calmodulin 2 (phosphorylase kinase, delta) /// calmodulin 3 (phosphorylase kinase, delta) </td> <td> CALM1 /// CALM2 /// CALM3 </td> <td> 801 /// 805 /// 808 </td> <td> NM_001166106 /// NM_001743 /// NM_005184 /// NM_006888 /// XM_006720258 </td> <td> 0001975 // response to amphetamine // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0005513 // detection of calcium ion // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007190 // activation of adenylate cyclase activity // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // inferred from direct assay /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred by curator /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030801 // positive regulation of cyclic nucleotide metabolic process // inferred from direct assay /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0051343 // positive regulation of cyclic-nucleotide phosphodiesterase activity // inferred from direct assay /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay /// 0055117 // regulation of cardiac muscle contraction // inferred from mutant phenotype /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from electronic annotation /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060316 // positive regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0061024 // membrane organization // traceable author statement /// 1901841 // regulation of high voltage-gated calcium channel activity // inferred from electronic annotation /// 1901844 // regulation of cell communication by electrical coupling involved in cardiac conduction // inferred by curator </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0030017 // sarcomere // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008179 // adenylate cyclase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0030235 // nitric-oxide synthase regulator activity // inferred from electronic annotation /// 0031432 // titin binding // inferred from physical interaction /// 0031800 // type 3 metabotropic glutamate receptor binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction /// 0031997 // N-terminal myristoylation domain binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation /// 0050998 // nitric-oxide synthase binding // inferred from electronic annotation /// 0072542 // protein phosphatase activator activity // inferred from direct assay </td> <td> 84.45 </td> <td> 697.32 </td> <td> 1.69 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 203349_s_at </td> <td> 203349_s_at </td> <td> NM_004454 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004454.1 /DEF=Homo sapiens ets variant gene 5 (ets-related molecule) (ETV5), mRNA.  /FEA=mRNA /GEN=ETV5 /PROD=ets variant gene 5 (ets-related molecule) /DB_XREF=gi:4758315 /UG=Hs.43697 ets variant gene 5 (ets-related molecule) /FL=gb:NM_004454.1 </td> <td> NM_004454 </td> <td> ets variant 5 </td> <td> ETV5 </td> <td> 2119 </td> <td> NM_004454 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0007610 // behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0030154 // cell differentiation // not recorded /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048133 // male germ-line stem cell division // inferred from electronic annotation /// 0050807 // regulation of synapse organization // inferred from electronic annotation /// 0060252 // positive regulation of glial cell proliferation // inferred from electronic annotation /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0071340 // skeletal muscle acetylcholine-gated channel clustering // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from mutant phenotype /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0001228 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from mutant phenotype /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay </td> <td> 20.17 </td> <td> 158.36 </td> <td> 1.68 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 203276_at </td> <td> 203276_at </td> <td> NM_005573 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005573.1 /DEF=Homo sapiens lamin B1 (LMNB1), mRNA. /FEA=mRNA /GEN=LMNB1 /PROD=lamin B1 /DB_XREF=gi:5031876 /UG=Hs.89497 lamin B1 /FL=gb:M34458.1 gb:NM_005573.1 </td> <td> NM_005573 </td> <td> lamin B1 </td> <td> LMNB1 </td> <td> 4001 </td> <td> NM_001198557 /// NM_005573 </td> <td> 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005638 // lamin filament // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from electronic annotation </td> <td> 43.95 </td> <td> 85.92 </td> <td> 1.68 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 200614_at </td> <td> 200614_at </td> <td> NM_004859 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004859.1 /DEF=Homo sapiens clathrin, heavy polypeptide (Hc) (CLTC), mRNA. /FEA=mRNA /GEN=CLTC /PROD=clathrin heavy chain /DB_XREF=gi:4758011 /UG=Hs.178710 clathrin, heavy polypeptide (Hc) /FL=gb:D21260.1 gb:NM_004859.1 </td> <td> NM_004859 </td> <td> clathrin, heavy chain (Hc) </td> <td> CLTC </td> <td> 1213 </td> <td> NM_001288653 /// NM_004859 /// XM_005257012 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006898 // receptor-mediated endocytosis // inferred from mutant phenotype /// 0007067 // mitotic nuclear division // inferred from mutant phenotype /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0033572 // transferrin transport // inferred from mutant phenotype /// 0061024 // membrane organization // traceable author statement /// 0090307 // spindle assembly involved in mitosis // inferred from direct assay /// 1900126 // negative regulation of hyaluronan biosynthetic process // inferred from direct assay /// 1900126 // negative regulation of hyaluronan biosynthetic process // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030117 // membrane coat // inferred from electronic annotation /// 0030118 // clathrin coat // non-traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // inferred from electronic annotation /// 0030132 // clathrin coat of coated pit // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031523 // Myb complex // inferred from direct assay /// 0032588 // trans-Golgi network membrane // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071439 // clathrin complex // inferred from direct assay </td> <td> 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005198 // structural molecule activity // non-traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0032051 // clathrin light chain binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 125.18 </td> <td> 1544.89 </td> <td> 1.68 </td> <td> 0.13 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201379_s_at </td> <td> 201379_s_at </td> <td> NM_003288 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003288.1 /DEF=Homo sapiens tumor protein D52-like 2 (TPD52L2), mRNA. /FEA=mRNA /GEN=TPD52L2 /PROD=tumor protein D52-like 2 /DB_XREF=gi:4507642 /UG=Hs.154718 tumor protein D52-like 2 /FL=gb:AF004430.1 gb:NM_003288.1 </td> <td> NM_003288 </td> <td> tumor protein D52-like 2 </td> <td> TPD52L2 </td> <td> 7165 </td> <td> NM_001243891 /// NM_001243892 /// NM_001243894 /// NM_001243895 /// NM_003288 /// NM_199359 /// NM_199360 /// NM_199361 /// NM_199362 /// NM_199363 /// NR_045090 </td> <td> 0042127 // regulation of cell proliferation // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay </td> <td> 47.85 </td> <td> 189.68 </td> <td> 1.68 </td> <td> 0.14 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 215001_s_at </td> <td> 215001_s_at </td> <td> AL161952 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL161952.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434M0813 (from clone DKFZp434M0813); partial cds.  /FEA=mRNA /GEN=DKFZp434M0813 /PROD=hypothetical protein /DB_XREF=gi:7328002 /UG=Hs.170171 glutamate-ammonia ligase (glutamine synthase) </td> <td> AL161952 </td> <td> glutamate-ammonia ligase </td> <td> GLUL </td> <td> 2752 </td> <td> NM_001033044 /// NM_001033056 /// NM_002065 /// XM_006711278 </td> <td> 0001504 // neurotransmitter uptake // traceable author statement /// 0006536 // glutamate metabolic process // inferred from electronic annotation /// 0006538 // glutamate catabolic process // traceable author statement /// 0006542 // glutamine biosynthetic process // traceable author statement /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008283 // cell proliferation // inferred from direct assay /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0009749 // response to glucose // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004351 // glutamate decarboxylase activity // inferred from electronic annotation /// 0004356 // glutamate-ammonia ligase activity // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016595 // glutamate binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0045503 // dynein light chain binding // inferred from electronic annotation </td> <td> 40.77 </td> <td> 369.81 </td> <td> 1.68 </td> <td> 0.14 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201387_s_at </td> <td> 201387_s_at </td> <td> NM_004181 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004181.1 /DEF=Homo sapiens ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) (UCHL1), mRNA.  /FEA=mRNA /GEN=UCHL1 /PROD=ubiquitin carboxyl-terminal esterase L1(ubiquitin thiolesterase) /DB_XREF=gi:4759283 /UG=Hs.76118 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) /FL=gb:BC000332.1 gb:BC005117.1 gb:NM_004181.1 </td> <td> NM_004181 </td> <td> ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) </td> <td> UCHL1 </td> <td> 7345 </td> <td> NM_004181 </td> <td> 0002931 // response to ischemia // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007412 // axon target recognition // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019896 // axon transport of mitochondrion // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0042755 // eating behavior // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0048747 // muscle fiber development // inferred from electronic annotation /// 0050905 // neuromuscular process // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // traceable author statement /// 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008242 // omega peptidase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031694 // alpha-2A adrenergic receptor binding // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay </td> <td> -70.00 </td> <td> 581.48 </td> <td> -1.67 </td> <td> 0.14 </td> <td> 0.19 </td> <td> -4.56 </td> </tr>
  <tr> <td> 206284_x_at </td> <td> 206284_x_at </td> <td> NM_001834 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001834.1 /DEF=Homo sapiens clathrin, light polypeptide (Lcb) (CLTB), transcript variant nonbrain, mRNA.  /FEA=mRNA /GEN=CLTB /PROD=clathrin, light polypeptide B (Lcb) isoform a /DB_XREF=gi:4502900 /UG=Hs.73919 clathrin, light polypeptide (Lcb) /FL=gb:M20470.1 gb:NM_001834.1 </td> <td> NM_001834 </td> <td> clathrin, light chain B </td> <td> CLTB </td> <td> 1212 </td> <td> NM_001834 /// NM_007097 /// NR_045724 /// XM_006714818 </td> <td> 0006886 // intracellular protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from sequence or structural similarity /// 0030118 // clathrin coat // non-traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // inferred from electronic annotation /// 0030132 // clathrin coat of coated pit // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0060170 // ciliary membrane // inferred from electronic annotation </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042277 // peptide binding // inferred from electronic annotation </td> <td> -35.95 </td> <td> 197.32 </td> <td> -1.67 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 209248_at </td> <td> 209248_at </td> <td> AL136713 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136713.1 /DEF=Homo sapiens mRNA; cDNA DKFZp566K113 (from clone DKFZp566K113); complete cds.  /FEA=mRNA /GEN=DKFZp566K113 /PROD=hypothetical protein /DB_XREF=gi:12052945 /UG=Hs.182470 PTD010  protein /FL=gb:AF060923.1 gb:AL136713.1 gb:AF131820.1 gb:AF078863.1 gb:AB009685.1 gb:NM_014394.1 </td> <td> AL136713 </td> <td> growth hormone inducible transmembrane protein </td> <td> GHITM </td> <td> 27069 </td> <td> NM_014394 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -49.92 </td> <td> 405.76 </td> <td> -1.67 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 211547_s_at </td> <td> 211547_s_at </td> <td> L13387 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L13387.1 /DEF=Homo sapiens (clone 6-1) Miller-Dieker lissencephaly protein (LIS1) mRNA, complete cds.  /FEA=mRNA /GEN=LIS1 /PROD=Miller-Dieker lissencephaly protein /DB_XREF=gi:349827 /UG=Hs.77318 platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit (45kD) /FL=gb:L13387.1 </td> <td> L13387 </td> <td> platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) </td> <td> PAFAH1B1 </td> <td> 5048 </td> <td> NM_000430 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000132 // establishment of mitotic spindle orientation // inferred from mutant phenotype /// 0000226 // microtubule cytoskeleton organization // inferred from sequence or structural similarity /// 0000278 // mitotic cell cycle // traceable author statement /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001675 // acrosome assembly // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from mutant phenotype /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0001961 // positive regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0008090 // retrograde axon cargo transport // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from mutant phenotype /// 0009306 // protein secretion // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0017145 // stem cell division // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from sequence or structural similarity /// 0021540 // corpus callosum morphogenesis // inferred from mutant phenotype /// 0021766 // hippocampus development // inferred from sequence or structural similarity /// 0021819 // layer formation in cerebral cortex // inferred from sequence or structural similarity /// 0021895 // cerebral cortex neuron differentiation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0032319 // regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0036035 // osteoclast development // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation /// 0046469 // platelet activating factor metabolic process // inferred from sequence or structural similarity /// 0047496 // vesicle transport along microtubule // inferred from sequence or structural similarity /// 0048854 // brain morphogenesis // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from mutant phenotype /// 0051081 // nuclear envelope disassembly // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051660 // establishment of centrosome localization // inferred from electronic annotation </td> <td> 0000235 // astral microtubule // inferred from direct assay /// 0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from sequence or structural similarity /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008201 // heparin binding // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0034452 // dynactin binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0043274 // phospholipase binding // inferred from sequence or structural similarity /// 0045502 // dynein binding // inferred from direct assay /// 0045505 // dynein intermediate chain binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from sequence or structural similarity </td> <td> 30.88 </td> <td> 102.26 </td> <td> 1.66 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 202251_at </td> <td> 202251_at </td> <td> NM_004698 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004698.1 /DEF=Homo sapiens U4U6-associated RNA splicing factor (HPRP3P), mRNA. /FEA=mRNA /GEN=HPRP3P /PROD=U4U6-associated RNA splicing factor /DB_XREF=gi:4758555 /UG=Hs.11776 U4U6-associated RNA splicing factor /FL=gb:BC000184.1 gb:BC001954.1 gb:AF016370.1 gb:AF001947.1 gb:NM_004698.1 </td> <td> NM_004698 </td> <td> pre-mRNA processing factor 3 </td> <td> PRPF3 </td> <td> 9129 </td> <td> NM_004698 /// XR_241103 /// XR_241104 </td> <td> 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // non-traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0046540 // U4/U6 x U5 tri-snRNP complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 21.80 </td> <td> 59.33 </td> <td> 1.66 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201663_s_at </td> <td> 201663_s_at </td> <td> NM_005496 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005496.1 /DEF=Homo sapiens chromosome-associated polypeptide C (CAP-C), mRNA. /FEA=mRNA /GEN=CAP-C /PROD=chromosome-associated polypeptide C /DB_XREF=gi:4885112 /UG=Hs.50758 SMC4 (structural maintenance of chromosomes 4, yeast)-like 1 /FL=gb:AB019987.1 gb:NM_005496.1 gb:AL136877.1 </td> <td> NM_005496 </td> <td> structural maintenance of chromosomes 4 </td> <td> SMC4 </td> <td> 10051 </td> <td> NM_001002799 /// NM_001002800 /// NM_001288753 /// NM_005496 /// XM_006713459 </td> <td> 0000070 // mitotic sister chromatid segregation // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007062 // sister chromatid cohesion // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007076 // mitotic chromosome condensation // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0010032 // meiotic chromosome condensation // inferred from electronic annotation /// 0030261 // chromosome condensation // inferred from electronic annotation /// 0045132 // meiotic chromosome segregation // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051383 // kinetochore organization // inferred from electronic annotation </td> <td> 0000796 // condensin complex // inferred from direct assay /// 0000796 // condensin complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> -40.77 </td> <td> 335.51 </td> <td> -1.66 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 210970_s_at </td> <td> 210970_s_at </td> <td> AF235049 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF235049.1 /DEF=Homo sapiens putative BTK-binding protein mRNA, complete cds. /FEA=mRNA /PROD=putative BTK-binding protein /DB_XREF=gi:11036533 /UG=Hs.7387 DKFZP564B116 protein /FL=gb:AF235049.1 </td> <td> AF235049 </td> <td> inhibitor of Bruton agammaglobulinemia tyrosine kinase </td> <td> IBTK </td> <td> 25998 </td> <td> NM_015525 /// XM_006715453 /// XM_006715454 /// XM_006715455 </td> <td> 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0061099 // negative regulation of protein tyrosine kinase activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0030292 // protein tyrosine kinase inhibitor activity // inferred from direct assay </td> <td> 20.83 </td> <td> 90.14 </td> <td> 1.65 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 217868_s_at </td> <td> 217868_s_at </td> <td> NM_016025 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016025.1 /DEF=Homo sapiens CGI-81 protein (DREV1), mRNA. /FEA=mRNA /GEN=DREV1 /PROD=CGI-81 protein /DB_XREF=gi:7705788 /UG=Hs.279583 CGI-81 protein /FL=gb:BC000195.1 gb:AF151839.1 gb:NM_016025.1 </td> <td> NM_016025 </td> <td> methyltransferase like 9 </td> <td> METTL9 </td> <td> 51108 </td> <td> NM_001077180 /// NM_001288659 /// NM_001288660 /// NM_016025 /// XM_006721049 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation </td> <td> -94.58 </td> <td> 484.91 </td> <td> -1.65 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 204900_x_at </td> <td> 204900_x_at </td> <td> NM_003864 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003864.1 /DEF=Homo sapiens sin3-associated polypeptide, 30kD (SAP30), mRNA. /FEA=mRNA /GEN=SAP30 /PROD=sin3 associated polypeptide p30 /DB_XREF=gi:4506782 /UG=Hs.20985 sin3-associated polypeptide, 30kD /FL=gb:AF055993.1 gb:NM_003864.1 </td> <td> NM_003864 </td> <td> Sin3A-associated protein, 30kDa </td> <td> SAP30 </td> <td> 8819 </td> <td> NM_003864 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation </td> <td> 0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -22.77 </td> <td> 98.44 </td> <td> -1.65 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 213911_s_at </td> <td> 213911_s_at </td> <td> BF718636 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF718636 /FEA=EST /DB_XREF=gi:12019549 /DB_XREF=est:KEST107 /CLONE=S90891.NIH-8-R /UG=Hs.119192 H2A histone family, member Z </td> <td> BF718636 </td> <td> H2A histone family, member Z </td> <td> H2AFZ </td> <td> 3015 </td> <td> NM_002106 /// XM_005262971 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0071392 // cellular response to estradiol stimulus // inferred from mutant phenotype </td> <td> 0000786 // nucleosome // inferred from electronic annotation /// 0001740 // Barr body // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005720 // nuclear heterochromatin // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031490 // chromatin DNA binding // inferred from direct assay /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 73.70 </td> <td> 1242.60 </td> <td> 1.65 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208640_at </td> <td> 208640_at </td> <td> BG292367 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG292367 /FEA=EST /DB_XREF=gi:13051102 /DB_XREF=est:602386268F1 /CLONE=IMAGE:4515137 /UG=Hs.173737 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) /FL=gb:BC004247.1 gb:M29870.1 gb:M31467.1 gb:NM_006908.2 </td> <td> BG292367 </td> <td> ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) </td> <td> RAC1 </td> <td> 5879 </td> <td> NM_006908 /// NM_018890 /// NM_198829 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0002093 // auditory receptor cell morphogenesis // inferred from electronic annotation /// 0002551 // mast cell chemotaxis // inferred from electronic annotation /// 0003382 // epithelial cell morphogenesis // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006911 // phagocytosis, engulfment // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006972 // hyperosmotic response // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0010310 // regulation of hydrogen peroxide metabolic process // traceable author statement /// 0010592 // positive regulation of lamellipodium assembly // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016358 // dendrite development // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021799 // cerebral cortex radially oriented cell migration // inferred from electronic annotation /// 0021831 // embryonic olfactory bulb interneuron precursor migration // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from genetic interaction /// 0030041 // actin filament polymerization // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0031529 // ruffle organization // inferred from direct assay /// 0031529 // ruffle organization // traceable author statement /// 0032707 // negative regulation of interleukin-23 production // inferred from direct assay /// 0034446 // substrate adhesion-dependent cell spreading // inferred from electronic annotation /// 0035025 // positive regulation of Rho protein signal transduction // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0043652 // engulfment of apoptotic cell // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0045453 // bone resorption // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048261 // negative regulation of receptor-mediated endocytosis // traceable author statement /// 0048532 // anatomical structure arrangement // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0048870 // cell motility // inferred from direct assay /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0051668 // localization within membrane // inferred from mutant phenotype /// 0060071 // Wnt signaling pathway, planar cell polarity pathway // inferred from electronic annotation /// 0060263 // regulation of respiratory burst // inferred from direct assay /// 0071526 // semaphorin-plexin signaling pathway // inferred from sequence or structural similarity /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // inferred from electronic annotation /// 0097178 // ruffle assembly // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0001891 // phagocytic cup // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0019897 // extrinsic component of plasma membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction /// 0051022 // Rho GDP-dissociation inhibitor binding // inferred from sequence or structural similarity </td> <td> -73.02 </td> <td> 1999.89 </td> <td> -1.64 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 217813_s_at </td> <td> 217813_s_at </td> <td> NM_006717 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006717.1 /DEF=Homo sapiens spindlin (SPIN), mRNA. /FEA=mRNA /GEN=SPIN /PROD=spindlin /DB_XREF=gi:5730064 /UG=Hs.289043 spindlin /FL=gb:AL136719.1 gb:AF087864.1 gb:AF317228.2 gb:AF106682.1 gb:NM_006717.1 </td> <td> NM_006717 </td> <td> spindlin 1 </td> <td> SPIN1 </td> <td> 10927 </td> <td> NM_006717 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0009303 // rRNA transcription // inferred from direct assay /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0035064 // methylated histone binding // inferred from direct assay </td> <td> -25.60 </td> <td> 90.80 </td> <td> -1.64 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 221452_s_at </td> <td> 221452_s_at </td> <td> NM_030969 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030969.1 /DEF=Homo sapiens hypothetical protein MGC1223 (MGC1223), mRNA. /FEA=CDS /GEN=MGC1223 /PROD=hypothetical protein MGC1223 /DB_XREF=gi:13624338 /FL=gb:NM_030969.1 </td> <td> NM_030969 </td> <td> transmembrane protein 14B </td> <td> TMEM14B </td> <td> 81853 </td> <td> NM_001127711 /// NM_001286484 /// NM_001286488 /// NM_001286489 /// NM_030969 /// NR_104454 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 46.62 </td> <td> 270.06 </td> <td> 1.64 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201179_s_at </td> <td> 201179_s_at </td> <td> J03005 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:J03005.1 /DEF=Human alternative guanine nucleotide-binding regulatory protein (G) alpha-inhibitory-subunit mRNA, complete cds.  /FEA=mRNA /GEN=GNAI1 /DB_XREF=gi:183183 /UG=Hs.73799 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 /FL=gb:J03005.1 gb:J03198.1 gb:M27543.1 gb:J03238.1 gb:NM_006496.1 </td> <td> J03005 </td> <td> guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 </td> <td> GNAI3 </td> <td> 2773 </td> <td> NM_006496 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement /// 0006906 // vesicle fusion // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway //  /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007194 // negative regulation of adenylate cyclase activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0051301 // cell division // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // not recorded /// 0042588 // zymogen granule // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0004871 // signal transducer activity // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031821 // G-protein coupled serotonin receptor binding // not recorded /// 0032794 // GTPase activating protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -32.52 </td> <td> 247.86 </td> <td> -1.64 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201234_at </td> <td> 201234_at </td> <td> NM_004517 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004517.1 /DEF=Homo sapiens integrin-linked kinase (ILK), mRNA. /FEA=mRNA /GEN=ILK /PROD=integrin-linked kinase /DB_XREF=gi:4758605 /UG=Hs.6196 integrin-linked kinase /FL=gb:U40282.1 gb:NM_004517.1 </td> <td> NM_004517 </td> <td> integrin-linked kinase </td> <td> ILK </td> <td> 3611 </td> <td> NM_001014794 /// NM_001014795 /// NM_001278441 /// NM_001278442 /// NM_004517 /// XM_005252904 /// XM_005252905 </td> <td> 0001558 // regulation of cell growth // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001954 // positive regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from direct assay /// 0007569 // cell aging // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0010667 // negative regulation of cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0014044 // Schwann cell development // inferred from electronic annotation /// 0014912 // negative regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0021675 // nerve development // inferred from electronic annotation /// 0022011 // myelination in peripheral nervous system // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0032288 // myelin assembly // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034446 // substrate adhesion-dependent cell spreading // inferred from mutant phenotype /// 0042327 // positive regulation of phosphorylation // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043206 // extracellular fibril organization // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043491 // protein kinase B signaling // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045197 // establishment or maintenance of epithelial cell apical/basal polarity // inferred from electronic annotation /// 0045663 // positive regulation of myoblast differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030017 // sarcomere // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043034 // costamere // inferred from electronic annotation /// 0043195 // terminal bouton // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> 81.65 </td> <td> 471.75 </td> <td> 1.64 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 202534_x_at </td> <td> 202534_x_at </td> <td> NM_000791 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000791.2 /DEF=Homo sapiens dihydrofolate reductase (DHFR), mRNA. /FEA=mRNA /GEN=DHFR /PROD=dihydrofolate reductase /DB_XREF=gi:7262376 /UG=Hs.83765 dihydrofolate reductase /FL=gb:BC000192.1 gb:BC003584.1 gb:NM_000791.2 </td> <td> NM_000791 </td> <td> dihydrofolate reductase </td> <td> DHFR </td> <td> 1719 </td> <td> NM_000791 /// NM_001290354 /// NM_001290357 /// NR_110936 /// XM_005248455 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006545 // glycine biosynthetic process // inferred from electronic annotation /// 0006545 // glycine biosynthetic process // non-traceable author statement /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // non-traceable author statement /// 0031427 // response to methotrexate // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0046653 // tetrahydrofolate metabolic process // inferred from direct assay /// 0046654 // tetrahydrofolate biosynthetic process // inferred from electronic annotation /// 0046655 // folic acid metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0004146 // dihydrofolate reductase activity // inferred from direct assay /// 0004146 // dihydrofolate reductase activity // inferred from electronic annotation /// 0004146 // dihydrofolate reductase activity // non-traceable author statement /// 0008144 // drug binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation </td> <td> 41.95 </td> <td> 128.07 </td> <td> 1.64 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201727_s_at </td> <td> 201727_s_at </td> <td> NM_001419 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001419.1 /DEF=Homo sapiens ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) (ELAVL1), mRNA.  /FEA=mRNA /GEN=ELAVL1 /PROD=ELAV (embryonic lethal, abnormal vision,Drosophila)-like 1 (Hu antigen R) /DB_XREF=gi:4503550 /UG=Hs.12379 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) /FL=gb:U38175.1 gb:BC003376.1 gb:NM_001419.1 </td> <td> NM_001419 </td> <td> ELAV like RNA binding protein 1 </td> <td> ELAVL1 </td> <td> 1994 </td> <td> NM_001419 /// XR_430131 </td> <td> 0006417 // regulation of translation // inferred from mutant phenotype /// 0007275 // multicellular organismal development // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from direct assay /// 0048255 // mRNA stabilization // inferred from direct assay /// 0048255 // mRNA stabilization // inferred from mutant phenotype /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from mutant phenotype /// 2000036 // regulation of stem cell maintenance // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003729 // mRNA binding // traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0017091 // AU-rich element binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0035925 // mRNA 3'-UTR AU-rich region binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -27.52 </td> <td> 191.14 </td> <td> -1.64 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208688_x_at </td> <td> 208688_x_at </td> <td> U78525 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U78525.1 /DEF=Homo sapiens eukaryotic translation initiation factor (eIF3) mRNA, complete cds.  /FEA=mRNA /GEN=eIF3 /PROD=eukaryotic translation initiation factor /DB_XREF=gi:2558667 /UG=Hs.57783 eukaryotic translation initiation factor 3, subunit 9 (eta, 116kD) /FL=gb:U78525.1 </td> <td> U78525 </td> <td> eukaryotic translation initiation factor 3, subunit B </td> <td> EIF3B </td> <td> 8662 </td> <td> NM_001037283 /// NM_003751 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0031369 // translation initiation factor binding // inferred from electronic annotation /// 0032947 // protein complex scaffold // traceable author statement </td> <td> -67.50 </td> <td> 712.10 </td> <td> -1.64 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 208927_at </td> <td> 208927_at </td> <td> BF673888 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF673888 /FEA=EST /DB_XREF=gi:11947783 /DB_XREF=est:602137554F1 /CLONE=IMAGE:4274077 /UG=Hs.129951 speckle-type POZ protein /FL=gb:BC001269.1 </td> <td> BF673888 </td> <td> speckle-type POZ protein </td> <td> SPOP </td> <td> 8405 </td> <td> NM_001007226 /// NM_001007227 /// NM_001007228 /// NM_001007229 /// NM_001007230 /// NM_003563 /// XM_005257723 /// XM_005257724 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> 31.33 </td> <td> 112.54 </td> <td> 1.64 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 209784_s_at </td> <td> 209784_s_at </td> <td> AF029778 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF029778.1 /DEF=Homo sapiens Jagged2 (JAG2) mRNA, complete cds. /FEA=mRNA /GEN=JAG2 /PROD=Jagged2 /DB_XREF=gi:2605944 /UG=Hs.166154 jagged 2 /FL=gb:AF003521.1 gb:AF020201.1 gb:AF029778.1 gb:NM_002226.1 </td> <td> AF029778 </td> <td> jagged 2 </td> <td> JAG2 </td> <td> 3714 </td> <td> NM_002226 /// NM_145159 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0007049 // cell cycle // non-traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007219 // Notch signaling pathway // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from expression pattern /// 0009912 // auditory receptor cell fate commitment // inferred from sequence or structural similarity /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from direct assay /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from direct assay /// 0030334 // regulation of cell migration // non-traceable author statement /// 0042127 // regulation of cell proliferation // inferred from direct assay /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042492 // gamma-delta T cell differentiation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045061 // thymic T cell selection // inferred from direct assay /// 1990134 // epithelial cell apoptotic process involved in palatal shelf morphogenesis // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005112 // Notch binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay </td> <td> -98.00 </td> <td> 487.70 </td> <td> -1.64 </td> <td> 0.14 </td> <td> 0.20 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201230_s_at </td> <td> 201230_s_at </td> <td> NM_006321 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006321.1 /DEF=Homo sapiens ariadne (Drosophila) homolog 2 (ARIH2), mRNA. /FEA=mRNA /GEN=ARIH2 /PROD=ariadne (Drosophila) homolog 2 /DB_XREF=gi:5453556 /UG=Hs.241558 ariadne (Drosophila) homolog 2 /FL=gb:BC000422.1 gb:AF099149.1 gb:NM_006321.1 gb:AF183427.1 </td> <td> NM_006321 </td> <td> ariadne RBR E3 ubiquitin protein ligase 2 </td> <td> ARIH2 </td> <td> 10425 </td> <td> NM_006321 /// XM_005264798 /// XM_006712924 /// XM_006712925 /// XM_006712926 /// XM_006712927 /// XM_006712928 /// XM_006712929 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0048588 // developmental cell growth // inferred from direct assay /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0071425 // hematopoietic stem cell proliferation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 24.02 </td> <td> 126.71 </td> <td> 1.64 </td> <td> 0.14 </td> <td> 0.21 </td> <td> -4.56 </td> </tr>
  <tr> <td> 209103_s_at </td> <td> 209103_s_at </td> <td> BC001049 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001049.1 /DEF=Homo sapiens, Similar to ubiquitin fusion degradation 1 like, clone MGC:1385, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to ubiquitin fusion degradation 1 like /DB_XREF=gi:12654446 /UG=Hs.181369 ubiquitin fusion degradation 1-like /FL=gb:BC001049.1 gb:BC005087.1 gb:AF141201.1 </td> <td> BC001049 </td> <td> ubiquitin fusion degradation 1 like (yeast) </td> <td> UFD1L </td> <td> 7353 </td> <td> NM_001035247 /// NM_005659 /// XM_005261276 /// XM_005261277 /// XM_006724319 </td> <td> 0001501 // skeletal system development // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation </td> <td> 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> 70.03 </td> <td> 410.34 </td> <td> 1.64 </td> <td> 0.14 </td> <td> 0.21 </td> <td> -4.56 </td> </tr>
  <tr> <td> 216309_x_at </td> <td> 216309_x_at </td> <td> AF072467 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF072467.1 /DEF=Homo sapiens (JH8) mRNA, partial cds. /FEA=mRNA /GEN=JH8 /PROD=unknown /DB_XREF=gi:3435200 /UG=Hs.142296 jerky (mouse) homolog </td> <td> AF072467 </td> <td> Jrk homolog (mouse) </td> <td> JRK </td> <td> 8629 </td> <td> NM_001077527 /// NM_001279352 /// NM_003724 /// XM_006716677 /// XM_006716678 /// XM_006716679 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 21.43 </td> <td> 51.29 </td> <td> 1.64 </td> <td> 0.14 </td> <td> 0.21 </td> <td> -4.56 </td> </tr>
  <tr> <td> 209107_x_at </td> <td> 209107_x_at </td> <td> U19179 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U19179.1 /DEF=Human (Hin-2) mRNA, complete cds. /FEA=mRNA /GEN=Hin-2 /DB_XREF=gi:726037 /UG=Hs.74002 nuclear receptor coactivator 1 /FL=gb:U19179.1 </td> <td> U19179 </td> <td> nuclear receptor coactivator 1 </td> <td> NCOA1 </td> <td> 8648 </td> <td> NM_003743 /// NM_147223 /// NM_147233 /// XM_005264625 /// XM_005264626 /// XM_005264627 /// XM_005264628 /// XM_006712126 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000435 // positive regulation of transcription from RNA polymerase II promoter by galactose // inferred from direct assay /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009725 // response to hormone // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0014807 // regulation of somitogenesis // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0042698 // ovulation cycle // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045925 // positive regulation of female receptivity // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0060179 // male mating behavior // inferred from electronic annotation /// 0060206 // estrous cycle phase // inferred from electronic annotation /// 0060594 // mammary gland specification // inferred from electronic annotation /// 0060713 // labyrinthine layer morphogenesis // inferred from electronic annotation /// 2001038 // regulation of cellular response to drug // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation </td> <td> 0001012 // RNA polymerase II regulatory region DNA binding // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0032403 // protein complex binding // inferred from electronic annotation /// 0033142 // progesterone receptor binding // inferred from electronic annotation /// 0035257 // nuclear hormone receptor binding // inferred from direct assay /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // non-traceable author statement /// 0071837 // HMG box domain binding // inferred from electronic annotation </td> <td> -26.40 </td> <td> 169.90 </td> <td> -1.64 </td> <td> 0.14 </td> <td> 0.21 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201259_s_at </td> <td> 201259_s_at </td> <td> AI768845 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI768845 /FEA=EST /DB_XREF=gi:5235354 /DB_XREF=est:wj12e10.x1 /CLONE=IMAGE:2402634 /UG=Hs.80919 synaptophysin-like protein /FL=gb:NM_006754.1 </td> <td> AI768845 </td> <td> synaptophysin-like 1 </td> <td> SYPL1 </td> <td> 6856 </td> <td> NM_006754 /// NM_182715 /// XM_006716099 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement </td> <td> 0005887 // integral component of plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0030141 // secretory granule // inferred from electronic annotation /// 0030285 // integral component of synaptic vesicle membrane // not recorded /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from electronic annotation </td> <td> -58.60 </td> <td> 377.95 </td> <td> -1.63 </td> <td> 0.14 </td> <td> 0.21 </td> <td> -4.56 </td> </tr>
  <tr> <td> 202296_s_at </td> <td> 202296_s_at </td> <td> NM_007033 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007033.1 /DEF=Homo sapiens similar to S. cerevisiae RER1 (RER1), mRNA. /FEA=mRNA /GEN=RER1 /PROD=similar to S. cerevisiae RER1 /DB_XREF=gi:5902045 /UG=Hs.40500 similar to S. cerevisiae RER1 /FL=gb:BC004965.1 gb:NM_007033.1 gb:AF157324.1 </td> <td> NM_007033 </td> <td> retention in endoplasmic reticulum sorting receptor 1 </td> <td> RER1 </td> <td> 11079 </td> <td> NM_007033 /// XM_005244713 /// XM_006710305 /// XM_006710306 /// XM_006710307 </td> <td> 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030173 // integral component of Golgi membrane // inferred from direct assay </td> <td>  </td> <td> 48.18 </td> <td> 418.69 </td> <td> 1.63 </td> <td> 0.14 </td> <td> 0.21 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201636_at </td> <td> 201636_at </td> <td> BG025078 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG025078 /FEA=EST /DB_XREF=gi:12411309 /DB_XREF=est:602276425F1 /CLONE=IMAGE:4364070 /UG=Hs.82712 fragile X mental retardation, autosomal homolog 1 /FL=gb:NM_005087.1 gb:U25165.1 </td> <td> BG025078 </td> <td> fragile X mental retardation, autosomal homolog 1 </td> <td> FXR1 </td> <td> 8087 </td> <td> NM_001013438 /// NM_001013439 /// NM_005087 /// XM_005247813 /// XM_005247814 /// XM_005247815 /// XM_005247816 /// XM_006713775 </td> <td> 0006915 // apoptotic process // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005844 // polysome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0043034 // costamere // inferred from electronic annotation </td> <td> 0002151 // G-quadruplex RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -42.20 </td> <td> 196.10 </td> <td> -1.63 </td> <td> 0.14 </td> <td> 0.21 </td> <td> -4.56 </td> </tr>
  <tr> <td> 202322_s_at </td> <td> 202322_s_at </td> <td> NM_004837 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004837.1 /DEF=Homo sapiens geranylgeranyl diphosphate synthase 1 (GGPS1), mRNA. /FEA=mRNA /GEN=GGPS1 /PROD=geranylgeranyl diphosphate synthase 1 /DB_XREF=gi:4758429 /UG=Hs.55498 geranylgeranyl diphosphate synthase 1 /FL=gb:AF057698.1 gb:BC005252.1 gb:AB017971.1 gb:AB016043.1 gb:AB019036.1 gb:NM_004837.1 gb:AF125394.1 </td> <td> NM_004837 </td> <td> geranylgeranyl diphosphate synthase 1 </td> <td> GGPS1 </td> <td> 9453 </td> <td> NM_001037277 /// NM_001037278 /// NM_004837 /// NR_036605 </td> <td> 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006720 // isoprenoid metabolic process // inferred from direct assay /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0033384 // geranyl diphosphate biosynthetic process // inferred from electronic annotation /// 0033386 // geranylgeranyl diphosphate biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045337 // farnesyl diphosphate biosynthetic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004161 // dimethylallyltranstransferase activity // inferred from electronic annotation /// 0004311 // farnesyltranstransferase activity // inferred from direct assay /// 0004337 // geranyltranstransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -22.05 </td> <td> 145.68 </td> <td> -1.63 </td> <td> 0.14 </td> <td> 0.21 </td> <td> -4.56 </td> </tr>
  <tr> <td> 205036_at </td> <td> 205036_at </td> <td> NM_007080 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007080.1 /DEF=Homo sapiens Sm protein F (LSM6), mRNA. /FEA=mRNA /GEN=LSM6 /PROD=Sm protein F /DB_XREF=gi:5901997 /UG=Hs.42438 Sm protein F /FL=gb:NM_007080.1 gb:AF182292.1 </td> <td> NM_007080 </td> <td> LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) </td> <td> LSM6 </td> <td> 11157 </td> <td> NM_007080 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 35.53 </td> <td> 139.16 </td> <td> 1.63 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201938_at </td> <td> 201938_at </td> <td> NM_004642 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004642.1 /DEF=Homo sapiens deleted in oral cancer (mouse, homolog) 1 (DOC1), mRNA.  /FEA=mRNA /GEN=DOC1 /PROD=deleted in oral cancer (mouse, homolog) 1 /DB_XREF=gi:4758187 /UG=Hs.3436 deleted in oral cancer (mouse, homolog) 1 /FL=gb:AB006077.1 gb:AF006484.1 gb:NM_004642.1 </td> <td> NM_004642 </td> <td> cyclin-dependent kinase 2 associated protein 1 </td> <td> CDK2AP1 </td> <td> 8099 </td> <td> NM_001270433 /// NM_001270434 /// NM_004642 /// NR_073007 /// NR_073008 </td> <td> 0000084 // mitotic S phase // traceable author statement /// 0006261 // DNA-dependent DNA replication // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement </td> <td> 0003677 // DNA binding // traceable author statement </td> <td> 196.98 </td> <td> 1373.41 </td> <td> 1.63 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.56 </td> </tr>
  <tr> <td> 201240_s_at </td> <td> 201240_s_at </td> <td> NM_014752 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014752.1 /DEF=Homo sapiens KIAA0102 gene product (KIAA0102), mRNA. /FEA=mRNA /GEN=KIAA0102 /PROD=KIAA0102 gene product /DB_XREF=gi:7661907 /UG=Hs.77665 KIAA0102 gene product /FL=gb:D14658.1 gb:NM_014752.1 </td> <td> NM_014752 </td> <td> signal peptidase complex subunit 2 homolog (S. cerevisiae) </td> <td> SPCS2 </td> <td> 9789 </td> <td> NM_014752 </td> <td> 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005787 // signal peptidase complex // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 60.07 </td> <td> 675.14 </td> <td> 1.62 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200778_s_at </td> <td> 200778_s_at </td> <td> AI191427 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI191427 /FEA=EST /DB_XREF=gi:3742636 /DB_XREF=est:qe48g03.x1 /CLONE=IMAGE:1742260 /UG=Hs.155595 neural precursor cell expressed, developmentally down-regulated 5 /FL=gb:D28540.1 gb:NM_004404.1 gb:D63878.1 </td> <td> AI191427 </td> <td> septin 2 </td> <td> SEPT2 </td> <td> 4735 </td> <td> NM_001008491 /// NM_001008492 /// NM_001282972 /// NM_001282973 /// NM_004404 /// NM_006155 /// XM_005247011 /// XM_005247012 /// XM_005247013 /// XM_006712546 /// XM_006712547 /// XM_006712548 /// XM_006712549 /// XM_006712550 </td> <td> 0002036 // regulation of L-glutamate transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000145 // exocyst // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0060170 // ciliary membrane // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from electronic annotation </td> <td> -155.48 </td> <td> 1007.56 </td> <td> -1.62 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202824_s_at </td> <td> 202824_s_at </td> <td> NM_005648 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005648.1 /DEF=Homo sapiens transcription elongation factor B (SIII), polypeptide 1 (15kD, elongin C) (TCEB1), mRNA.  /FEA=mRNA /GEN=TCEB1 /PROD=elongin C /DB_XREF=gi:5032160 /UG=Hs.184693 transcription elongation factor B (SIII), polypeptide 1 (15kD, elongin C) /FL=gb:NM_005648.1 gb:L34587.1 </td> <td> NM_005648 </td> <td> transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) </td> <td> TCEB1 </td> <td> 6921 </td> <td> NM_001204857 /// NM_001204858 /// NM_001204859 /// NM_001204860 /// NM_001204861 /// NM_001204862 /// NM_001204863 /// NM_001204864 /// NM_005648 /// XM_005251290 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032968 // positive regulation of transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0071456 // cellular response to hypoxia // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0030891 // VCB complex // inferred from electronic annotation /// 0070449 // elongin complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> 42.40 </td> <td> 468.57 </td> <td> 1.62 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 207625_s_at </td> <td> 207625_s_at </td> <td> NM_005093 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005093.1 /DEF=Homo sapiens core-binding factor, runt domain, alpha subunit 2; translocated to, 2 (CBFA2T2), mRNA.  /FEA=mRNA /GEN=CBFA2T2 /PROD=core-binding factor, runt domain, alpha subunit2; translocated to, 2 /DB_XREF=gi:4826662 /UG=Hs.153934 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 /FL=gb:AF013970.1 gb:NM_005093.1 </td> <td> NM_005093 </td> <td> core-binding factor, runt domain, alpha subunit 2; translocated to, 2 </td> <td> CBFA2T2 </td> <td> 9139 </td> <td> NM_001032999 /// NM_001039709 /// NM_005093 /// NM_175864 /// XM_006723886 /// XM_006723887 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from direct assay /// 0010977 // negative regulation of neuron projection development // inferred from sequence or structural similarity /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -23.27 </td> <td> 44.16 </td> <td> -1.62 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202233_s_at </td> <td> 202233_s_at </td> <td> NM_006004 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006004.1 /DEF=Homo sapiens ubiquinol-cytochrome c reductase hinge protein (UQCRH), mRNA.  /FEA=mRNA /GEN=UQCRH /PROD=ubiquinol-cytochrome c reductase hinge protein /DB_XREF=gi:5174744 /UG=Hs.73818 ubiquinol-cytochrome c reductase hinge protein /FL=gb:BC001426.1 gb:BC001934.1 gb:M36647.1 gb:NM_006004.1 </td> <td> NM_006004 </td> <td> ubiquinol-cytochrome c reductase hinge protein /// ubiquinol-cytochrome c reductase hinge protein-like </td> <td> UQCRH /// UQCRHL </td> <td> 7388 /// 440567 </td> <td> NM_001089591 /// NM_006004 /// XM_005271167 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // not recorded /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway //  /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // not recorded /// 0007266 // Rho protein signal transduction //  /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0031584 // activation of phospholipase D activity // not recorded /// 0031584 // activation of phospholipase D activity //  /// 0031584 // activation of phospholipase D activity // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0055114 // oxidation-reduction process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex //  /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // not recorded /// 0031526 // brush border membrane // not recorded /// 0031526 // brush border membrane //  /// 0031526 // brush border membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity //  /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity //  /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0008121 // ubiquinol-cytochrome-c reductase activity // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031683 // G-protein beta/gamma-subunit complex binding //  /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0031702 // type 1 angiotensin receptor binding // not recorded /// 0031702 // type 1 angiotensin receptor binding //  /// 0031752 // D5 dopamine receptor binding // not recorded /// 0031752 // D5 dopamine receptor binding //  /// 0031752 // D5 dopamine receptor binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 67.70 </td> <td> 823.67 </td> <td> 1.62 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 212782_x_at </td> <td> 212782_x_at </td> <td> BG335629 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG335629 /FEA=EST /DB_XREF=gi:13142067 /DB_XREF=est:602404254F1 /CLONE=IMAGE:4542084 /UG=Hs.80475 polymerase (RNA) II (DNA directed) polypeptide J (13.3kD) </td> <td> BG335629 </td> <td> polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa </td> <td> POLR2J </td> <td> 5439 </td> <td> NM_006234 /// XM_005250452 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay </td> <td> 0001055 // RNA polymerase II activity // not recorded /// 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030275 // LRR domain binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -39.70 </td> <td> 350.27 </td> <td> -1.62 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 203319_s_at </td> <td> 203319_s_at </td> <td> L04282 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L04282.1 /DEF=Human CACCC box-binding protein mRNA, complete cds. /FEA=mRNA /PROD=CACCC box-binding protein /DB_XREF=gi:388318 /UG=Hs.112180 zinc finger protein 148 (pHZ-52) /FL=gb:NM_021964.1 gb:L04282.1 </td> <td> L04282 </td> <td> zinc finger protein 148 </td> <td> ZNF148 </td> <td> 7707 </td> <td> NM_021964 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007276 // gamete generation // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0021762 // substantia nigra development // inferred from expression pattern /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay </td> <td> 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -20.48 </td> <td> 105.86 </td> <td> -1.62 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202085_at </td> <td> 202085_at </td> <td> NM_004817 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004817.1 /DEF=Homo sapiens tight junction protein 2 (zona occludens 2) (TJP2), mRNA.  /FEA=mRNA /GEN=TJP2 /PROD=tight junction protein 2 (zona occludens 2) /DB_XREF=gi:4759341 /UG=Hs.75608 tight junction protein 2 (zona occludens 2) /FL=gb:NM_004817.1 gb:L27476.1 </td> <td> NM_004817 </td> <td> tight junction protein 2 </td> <td> TJP2 </td> <td> 9414 </td> <td> NM_001170414 /// NM_001170415 /// NM_001170416 /// NM_001170630 /// NM_004817 /// NM_201629 /// XM_005252311 /// XM_005252312 /// XM_005252313 /// XM_005252314 /// XM_005252315 /// XM_006717324 </td> <td> 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0010033 // response to organic substance // inferred from electronic annotation /// 0035329 // hippo signaling // traceable author statement /// 0046939 // nucleotide phosphorylation // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay </td> <td> 0004385 // guanylate kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation </td> <td> -51.00 </td> <td> 507.95 </td> <td> -1.62 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 221771_s_at </td> <td> 221771_s_at </td> <td> BC003542 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BC003542.1 /DEF=Homo sapiens, clone IMAGE:3611719, mRNA, partial cds. /FEA=mRNA /PROD=Unknown (protein for IMAGE:3611719) /DB_XREF=gi:13097656 /UG=Hs.244482 Homo sapiens, clone IMAGE:3611719, mRNA, partial cds </td> <td> BC003542 </td> <td> M-phase phosphoprotein 8 </td> <td> MPHOSPH8 </td> <td> 54737 </td> <td> NM_017520 /// XM_005266435 /// XM_005266436 /// XR_245390 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007049 // cell cycle // non-traceable author statement /// 0044030 // regulation of DNA methylation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype </td> <td> 0000788 // nuclear nucleosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005720 // nuclear heterochromatin // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0035064 // methylated histone binding // inferred from direct assay </td> <td> 23.30 </td> <td> 66.62 </td> <td> 1.62 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201552_at </td> <td> 201552_at </td> <td> NM_005561 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005561.2 /DEF=Homo sapiens lysosomal-associated membrane protein 1 (LAMP1), mRNA. /FEA=mRNA /GEN=LAMP1 /PROD=lysosomal-associated membrane protein 1 /DB_XREF=gi:7669500 /UG=Hs.150101 lysosomal-associated membrane protein 1 /FL=gb:J04182.1 gb:J03263.1 gb:NM_005561.2 </td> <td> NM_005561 </td> <td> lysosomal-associated membrane protein 1 </td> <td> LAMP1 </td> <td> 3916 </td> <td> NM_005561 </td> <td> 0006914 // autophagy // inferred from electronic annotation /// 0008626 // granzyme-mediated apoptotic signaling pathway // inferred from mutant phenotype /// 0043323 // positive regulation of natural killer cell degranulation // inferred from mutant phenotype /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0048102 // autophagic cell death // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0072594 // establishment of protein localization to organelle // inferred from mutant phenotype /// 0090160 // Golgi to lysosome transport // inferred from mutant phenotype /// 1902513 // regulation of organelle transport along microtubule // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005771 // multivesicular body // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044194 // cytolytic granule // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097208 // alveolar lamellar body // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> -74.15 </td> <td> 854.67 </td> <td> -1.62 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 218171_at </td> <td> 218171_at </td> <td> AF195514 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF195514.1 /DEF=Homo sapiens VPS4-2 ATPase (VPS42) mRNA, complete cds. /FEA=mRNA /GEN=VPS42 /PROD=VPS4-2 ATPase /DB_XREF=gi:11225484 /UG=Hs.126550 suppressor of K+ transport defect 1 /FL=gb:AF195514.1 gb:AF038960.1 gb:NM_004869.1 </td> <td> AF195514 </td> <td> vacuolar protein sorting 4 homolog B (S. cerevisiae) </td> <td> VPS4B </td> <td> 9525 </td> <td> NM_004869 /// XM_006722582 </td> <td> 0006200 // ATP catabolic process // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007032 // endosome organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016197 // endosomal transport // inferred from direct assay /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0030301 // cholesterol transport // inferred from electronic annotation /// 0032367 // intracellular cholesterol transport // inferred from mutant phenotype /// 0032510 // endosome to lysosome transport via multivesicular body sorting pathway // inferred from mutant phenotype /// 0033993 // response to lipid // inferred from direct assay /// 0050792 // regulation of viral process // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 1902188 // positive regulation of viral release from host cell // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005774 // vacuolar membrane // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from mutant phenotype /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0009378 // four-way junction helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from mutant phenotype /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042623 // ATPase activity, coupled // non-traceable author statement </td> <td> -64.48 </td> <td> 382.44 </td> <td> -1.62 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 212263_at </td> <td> 212263_at </td> <td> AI114716 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI114716 /FEA=EST /DB_XREF=gi:6360061 /DB_XREF=est:HA1315 /UG=Hs.15020 homolog of mouse quaking QKI (KH domain RNA binding protein) /FL=gb:AF142419.1 gb:AF142422.1 </td> <td> AI114716 </td> <td> QKI, KH domain containing, RNA binding </td> <td> QKI </td> <td> 9444 </td> <td> NM_006775 /// NM_206853 /// NM_206854 /// NM_206855 /// XM_005267224 /// XR_245557 /// XR_427977 /// XR_427978 </td> <td> 0001570 // vasculogenesis // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation /// 0008366 // axon ensheathment // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0042759 // long-chain fatty acid biosynthetic process // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -63.95 </td> <td> 394.98 </td> <td> -1.62 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 210027_s_at </td> <td> 210027_s_at </td> <td> M80261 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M80261.1 /DEF=Human apurinic endonuclease (APE) mRNA, complete cds. /FEA=mRNA /GEN=APE /PROD=apurinic endonuclease /DB_XREF=gi:178742 /UG=Hs.73722 APEX nuclease (multifunctional DNA repair enzyme) /FL=gb:BC004979.1 gb:M80261.1 </td> <td> M80261 </td> <td> APEX nuclease (multifunctional DNA repair enzyme) 1 </td> <td> APEX1 </td> <td> 328 </td> <td> NM_001244249 /// NM_001641 /// NM_080648 /// NM_080649 /// XM_005267581 /// XM_005267582 </td> <td> 0000737 // DNA catabolic process, endonucleolytic // inferred from direct assay /// 0000737 // DNA catabolic process, endonucleolytic // inferred from electronic annotation /// 0000737 // DNA catabolic process, endonucleolytic // traceable author statement /// 0000738 // DNA catabolic process, exonucleolytic // not recorded /// 0006281 // DNA repair // inferred from direct assay /// 0006281 // DNA repair // traceable author statement /// 0006284 // base-excision repair // not recorded /// 0006284 // base-excision repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0014912 // negative regulation of smooth muscle cell migration // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // inferred from mutant phenotype /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0045739 // positive regulation of DNA repair // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0071417 // cellular response to organonitrogen compound // inferred from electronic annotation /// 0080111 // DNA demethylation // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // traceable author statement /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // inferred from electronic annotation /// 0090502 // RNA phosphodiester bond hydrolysis, endonucleolytic // traceable author statement /// 1900087 // positive regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005840 // ribosome // traceable author statement /// 0016607 // nuclear speck // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003684 // damaged DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity // inferred from direct assay /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from direct assay /// 0004520 // endodeoxyribonuclease activity // traceable author statement /// 0004521 // endoribonuclease activity // inferred from electronic annotation /// 0004523 // RNA-DNA hybrid ribonuclease activity // traceable author statement /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004528 // phosphodiesterase I activity // traceable author statement /// 0004844 // uracil DNA N-glycosylase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008081 // phosphoric diester hydrolase activity // inferred from direct assay /// 0008311 // double-stranded DNA 3'-5' exodeoxyribonuclease activity // not recorded /// 0008408 // 3'-5' exonuclease activity // inferred from direct assay /// 0008408 // 3'-5' exonuclease activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016890 // site-specific endodeoxyribonuclease activity, specific for altered base // inferred from direct assay /// 0031490 // chromatin DNA binding // inferred from direct assay /// 0032403 // protein complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from direct assay /// 0051059 // NF-kappaB binding // inferred from electronic annotation </td> <td> 64.20 </td> <td> 481.93 </td> <td> 1.61 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 212294_at </td> <td> 212294_at </td> <td> BG111761 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG111761 /FEA=EST /DB_XREF=gi:12605267 /DB_XREF=est:602285343F1 /CLONE=IMAGE:4372619 /UG=Hs.8107 Homo sapiens mRNA; cDNA DKFZp586B0918 (from clone DKFZp586B0918) </td> <td> BG111761 </td> <td> guanine nucleotide binding protein (G protein), gamma 12 </td> <td> GNG12 </td> <td> 55970 </td> <td> NM_018841 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement </td> <td> 0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from direct assay /// 0042301 // phosphate ion binding // inferred from electronic annotation </td> <td> 94.23 </td> <td> 981.79 </td> <td> 1.61 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 211716_x_at </td> <td> 211716_x_at </td> <td> BC005851 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005851.1 /DEF=Homo sapiens, Rho GDP dissociation inhibitor (GDI) alpha, clone MGC:2810, mRNA, complete cds.  /FEA=mRNA /PROD=Rho GDP dissociation inhibitor (GDI) alpha /DB_XREF=gi:13543380 /FL=gb:BC005851.1 </td> <td> BC005851 </td> <td> Rho GDP dissociation inhibitor (GDI) alpha </td> <td> ARHGDIA </td> <td> 396 </td> <td> NM_001185077 /// NM_001185078 /// NM_004309 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0050790 // regulation of catalytic activity // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0071526 // semaphorin-plexin signaling pathway // inferred from sequence or structural similarity </td> <td> 0001772 // immunological synapse // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005094 // Rho GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 134.57 </td> <td> 789.84 </td> <td> 1.61 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 208842_s_at </td> <td> 208842_s_at </td> <td> W93787 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W93787 /FEA=EST /DB_XREF=gi:1422930 /DB_XREF=est:zd96c09.s1 /CLONE=IMAGE:357328 /UG=Hs.6880 DKFZP434D156 protein /FL=gb:BC001408.1 </td> <td> W93787 </td> <td> golgi reassembly stacking protein 2, 55kDa </td> <td> GORASP2 </td> <td> 26003 </td> <td> NM_001201428 /// NM_015530 /// XM_006712408 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006996 // organelle organization // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 65.42 </td> <td> 530.59 </td> <td> 1.61 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 218027_at </td> <td> 218027_at </td> <td> NM_014175 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014175.1 /DEF=Homo sapiens HSPC145 protein (HSPC145), mRNA. /FEA=mRNA /GEN=HSPC145 /PROD=HSPC145 protein /DB_XREF=gi:7661805 /UG=Hs.18349 HSPC145 protein /FL=gb:AL136665.1 gb:BC000891.1 gb:AF161494.1 gb:NM_014175.1 </td> <td> NM_014175 </td> <td> mitochondrial ribosomal protein L15 </td> <td> MRPL15 </td> <td> 29088 </td> <td> NM_014175 </td> <td> 0006412 // translation // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0015934 // large ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 66.32 </td> <td> 662.84 </td> <td> 1.61 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201074_at </td> <td> 201074_at </td> <td> AA593983 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA593983 /FEA=EST /DB_XREF=gi:2409333 /DB_XREF=est:nn16d01.s1 /CLONE=IMAGE:1084033 /UG=Hs.172280 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 /FL=gb:U66615.1 gb:NM_003074.1 </td> <td> AA593983 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 </td> <td> SMARCC1 </td> <td> 6599 </td> <td> NM_003074 </td> <td> 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0001741 // XY body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from sequence or structural similarity /// 0071778 // WINAC complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> 58.10 </td> <td> 343.68 </td> <td> 1.61 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 213775_x_at </td> <td> 213775_x_at </td> <td> AI357871 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI357871 /FEA=EST /DB_XREF=gi:4109492 /DB_XREF=est:qv13b11.x1 /CLONE=IMAGE:1981437 /UG=Hs.169984 nuclear protein </td> <td> AI357871 </td> <td> zinc finger protein 638 /// ZNF638 intronic transcript 1 (non-protein coding) </td> <td> ZNF638 /// ZNF638-IT1 </td> <td> 27332 /// 100507113 </td> <td> NM_001014972 /// NM_001252612 /// NM_001252613 /// NM_014497 /// XM_005264261 /// XM_005264262 /// XM_005264263 /// XM_005264264 /// XM_006711989 /// XM_006711990 /// XR_109944 /// XR_112334 /// XR_171302 /// XR_244928 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -43.62 </td> <td> 270.56 </td> <td> -1.61 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 221932_s_at </td> <td> 221932_s_at </td> <td> AA133341 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA133341 /FEA=EST /DB_XREF=gi:1690309 /DB_XREF=est:zn92h02.s1 /CLONE=IMAGE:565683 /UG=Hs.13201 clone FLB4739 </td> <td> AA133341 </td> <td> glutaredoxin 5 </td> <td> GLRX5 </td> <td> 51218 </td> <td> NM_016417 </td> <td> 0030097 // hemopoiesis // inferred from sequence or structural similarity /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity </td> <td> 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation </td> <td> 41.20 </td> <td> 179.62 </td> <td> 1.61 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 209066_x_at </td> <td> 209066_x_at </td> <td> M26700 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M26700.1 /DEF=Human mitochondrial ubiquinone-binding protein mRNA, complete cds. /FEA=mRNA /GEN=UQBP /DB_XREF=gi:190803 /UG=Hs.131255 ubiquinol-cytochrome c reductase binding protein /FL=gb:BC005230.1 gb:M26700.1 </td> <td> M26700 </td> <td> ubiquinol-cytochrome c reductase binding protein </td> <td> UQCRB </td> <td> 7381 </td> <td> NM_001199975 /// NM_001254752 /// NM_006294 /// NR_045639 /// XM_006716652 </td> <td> 0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td>  </td> <td> 123.78 </td> <td> 671.26 </td> <td> 1.61 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 204359_at </td> <td> 204359_at </td> <td> NM_013231 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013231.1 /DEF=Homo sapiens fibronectin leucine rich transmembrane protein 2 (FLRT2), mRNA.  /FEA=mRNA /GEN=FLRT2 /PROD=fibronectin leucine rich transmembrane protein2 /DB_XREF=gi:7019380 /UG=Hs.48998 fibronectin leucine rich transmembrane protein 2 /FL=gb:AB007865.1 gb:AF169676.1 gb:NM_013231.1 </td> <td> NM_013231 </td> <td> fibronectin leucine rich transmembrane protein 2 /// uncharacterized LOC100506718 </td> <td> FLRT2 /// LOC100506718 </td> <td> 23768 /// 100506718 </td> <td> NM_013231 /// XM_005267489 /// XM_005267490 /// XM_006720095 /// XR_111450 /// XR_172052 /// XR_248023 /// XR_248024 /// XR_248025 /// XR_424524 /// XR_424525 /// XR_424526 /// XR_424527 /// XR_429303 /// XR_429304 /// XR_429305 /// XR_429306 /// XR_429307 /// XR_429308 /// XR_429309 /// XR_433009 /// XR_433010 /// XR_433011 /// XR_433012 /// XR_433013 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0035556 // intracellular signal transduction // non-traceable author statement </td> <td> 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005057 // receptor signaling protein activity // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // non-traceable author statement </td> <td> 36.90 </td> <td> 324.75 </td> <td> 1.61 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 208612_at </td> <td> 208612_at </td> <td> D83485 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D83485.1 /DEF=Homo sapiens mRNA for ER-60 protease, complete cds. /FEA=mRNA /PROD=ER-60 protease /DB_XREF=gi:1208426 /UG=Hs.289101 glucose regulated protein, 58kD /FL=gb:U42068.1 gb:D83485.1 gb:D16234.1 gb:NM_005313.1 </td> <td> D83485 </td> <td> protein disulfide isomerase family A, member 3 </td> <td> PDIA3 </td> <td> 2923 </td> <td> NM_005313 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006457 // protein folding // not recorded /// 0006457 // protein folding // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0006606 // protein import into nucleus // traceable author statement /// 0006621 // protein retention in ER lumen // traceable author statement /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0034976 // response to endoplasmic reticulum stress // not recorded /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003756 // protein disulfide isomerase activity // not recorded /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004629 // phospholipase C activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -151.97 </td> <td> 1016.24 </td> <td> -1.61 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 205289_at </td> <td> 205289_at </td> <td> AA583044 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA583044 /FEA=EST /DB_XREF=gi:2360404 /DB_XREF=est:nn80f11.s1 /CLONE=IMAGE:1090221 /UG=Hs.73853 bone morphogenetic protein 2 /FL=gb:NM_001200.1 </td> <td> AA583044 </td> <td> bone morphogenetic protein 2 </td> <td> BMP2 </td> <td> 650 </td> <td> NM_001200 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001837 // epithelial to mesenchymal transition // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0002062 // chondrocyte differentiation // inferred from direct assay /// 0003130 // BMP signaling pathway involved in heart induction // inferred from direct assay /// 0003181 // atrioventricular valve morphogenesis // inferred from sequence or structural similarity /// 0003203 // endocardial cushion morphogenesis // inferred from sequence or structural similarity /// 0003308 // negative regulation of Wnt signaling pathway involved in heart development // inferred from direct assay /// 0006029 // proteoglycan metabolic process // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0007219 // Notch signaling pathway // inferred from sequence or structural similarity /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009887 // organ morphogenesis // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0010894 // negative regulation of steroid biosynthetic process // inferred from direct assay /// 0010922 // positive regulation of phosphatase activity // inferred from direct assay /// 0021537 // telencephalon development // inferred from direct assay /// 0021978 // telencephalon regionalization // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // traceable author statement /// 0030282 // bone mineralization // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from expression pattern /// 0030509 // BMP signaling pathway // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // traceable author statement /// 0031648 // protein destabilization // inferred from electronic annotation /// 0032348 // negative regulation of aldosterone biosynthetic process // inferred from direct assay /// 0033690 // positive regulation of osteoblast proliferation // inferred from sequence or structural similarity /// 0035051 // cardiocyte differentiation // inferred from direct assay /// 0035051 // cardiocyte differentiation // inferred from mutant phenotype /// 0035054 // embryonic heart tube anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0035630 // bone mineralization involved in bone maturation // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042482 // positive regulation of odontogenesis // inferred from sequence or structural similarity /// 0042487 // regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0045165 // cell fate commitment // inferred from sequence or structural similarity /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045778 // positive regulation of ossification // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048762 // mesenchymal cell differentiation // inferred from direct assay /// 0048839 // inner ear development // inferred from sequence or structural similarity /// 0051042 // negative regulation of calcium-independent cell-cell adhesion // inferred from direct assay /// 0051216 // cartilage development // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from mutant phenotype /// 0055008 // cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0060039 // pericardium development // inferred from sequence or structural similarity /// 0060128 // corticotropin hormone secreting cell differentiation // inferred from sequence or structural similarity /// 0060129 // thyroid-stimulating hormone-secreting cell differentiation // inferred from sequence or structural similarity /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from direct assay /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0060485 // mesenchyme development // inferred from mutant phenotype /// 0060804 // positive regulation of Wnt signaling pathway by BMP signaling pathway // inferred from sequence or structural similarity /// 0061036 // positive regulation of cartilage development // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071773 // cellular response to BMP stimulus // inferred from direct assay /// 0072138 // mesenchymal cell proliferation involved in ureteric bud development // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from expression pattern /// 1900745 // positive regulation of p38MAPK cascade // inferred from direct assay /// 1901522 // positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus // inferred from direct assay /// 2000065 // negative regulation of cortisol biosynthetic process // inferred from direct assay /// 2000726 // negative regulation of cardiac muscle cell differentiation // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay </td> <td> 0004745 // retinol dehydrogenase activity // inferred from sequence or structural similarity /// 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0019211 // phosphatase activator activity // inferred from direct assay /// 0046332 // SMAD binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070700 // BMP receptor binding // inferred from direct assay </td> <td> -29.70 </td> <td> 106.83 </td> <td> -1.61 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 206748_s_at </td> <td> 206748_s_at </td> <td> NM_003971 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003971.1 /DEF=Homo sapiens sperm associated antigen 9 (SPAG9), mRNA. /FEA=mRNA /GEN=SPAG9 /PROD=sperm associated antigen 9 /DB_XREF=gi:4504524 /UG=Hs.129872 sperm associated antigen 9 /FL=gb:NM_003971.1 </td> <td> NM_003971 </td> <td> sperm associated antigen 9 </td> <td> SPAG9 </td> <td> 9043 </td> <td> NM_001130527 /// NM_001130528 /// NM_001251971 /// NM_003971 /// NM_172345 /// XM_005257767 /// XM_005257768 /// XM_005257769 /// XM_005257770 /// XM_005257771 /// XM_005257772 /// XM_005257773 /// XM_005257774 /// XM_006722163 </td> <td> 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0042692 // muscle cell differentiation // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0090074 // negative regulation of protein homodimerization activity // inferred from electronic annotation </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016021 // integral component of membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008432 // JUN kinase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from electronic annotation /// 0048273 // mitogen-activated protein kinase p38 binding // inferred from electronic annotation </td> <td> -22.72 </td> <td> 101.19 </td> <td> -1.60 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 214394_x_at </td> <td> 214394_x_at </td> <td> AI613383 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI613383 /FEA=EST /DB_XREF=gi:4622550 /DB_XREF=est:tt80e08.x1 /CLONE=IMAGE:2247110 /UG=Hs.223241 eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) </td> <td> AI613383 </td> <td> eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) </td> <td> EEF1D </td> <td> 1936 </td> <td> NM_001130053 /// NM_001130054 /// NM_001130055 /// NM_001130056 /// NM_001130057 /// NM_001195203 /// NM_001289950 /// NM_001960 /// NM_032378 /// XM_005250820 /// XM_005250821 /// XM_005250823 /// XM_005250824 /// XM_005250825 /// XM_005250826 /// XM_006716519 /// XM_006716520 /// XM_006716521 /// XM_006716522 /// XM_006716523 /// XM_006716524 /// XM_006716525 /// XM_006725064 /// XM_006725065 /// XM_006725066 /// XM_006725067 /// XM_006725068 /// XM_006725069 /// XM_006725070 /// XM_006725071 /// XM_006725072 /// XM_006725073 /// XM_006725074 /// XM_006725075 /// XM_006725076 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005853 // eukaryotic translation elongation factor 1 complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement </td> <td> 171.73 </td> <td> 829.51 </td> <td> 1.60 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 71933_at </td> <td> 71933_at </td> <td> AI218134 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI218134:qh27f10.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-1845931 /clone_end=3' /gb=AI218134 /gi=3797949 /ug=Hs.220783 /len=499 </td> <td> AI218134 </td> <td> wingless-type MMTV integration site family, member 6 </td> <td> WNT6 </td> <td> 7475 </td> <td> NM_006522 </td> <td> 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0007267 // cell-cell signaling // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009798 // axis specification // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0016055 // Wnt signaling pathway // not recorded /// 0030182 // neuron differentiation // not recorded /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0042475 // odontogenesis of dentin-containing tooth // inferred from mutant phenotype /// 0045165 // cell fate commitment // not recorded /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0060684 // epithelial-mesenchymal cell signaling // inferred from electronic annotation /// 0061303 // cornea development in camera-type eye // inferred from sequence or structural similarity /// 0070172 // positive regulation of tooth mineralization // inferred from mutant phenotype /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity /// 0072079 // nephron tubule formation // inferred from electronic annotation /// 0072080 // nephron tubule development // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // not recorded /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation </td> <td> 0005102 // receptor binding // inferred from electronic annotation /// 0005109 // frizzled binding // not recorded </td> <td> -32.70 </td> <td> 209.95 </td> <td> -1.60 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 218520_at </td> <td> 218520_at </td> <td> NM_013254 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013254.1 /DEF=Homo sapiens TANK-binding kinase 1 (TBK1), mRNA. /FEA=mRNA /GEN=TBK1 /PROD=TANK-binding kinase 1 /DB_XREF=gi:7019546 /UG=Hs.21712 TANK-binding kinase 1 /FL=gb:AF191838.1 gb:NM_013254.1 gb:AF174536.1 </td> <td> NM_013254 </td> <td> TANK-binding kinase 1 </td> <td> TBK1 </td> <td> 29110 </td> <td> NM_013254 /// XM_005268809 /// XM_005268810 </td> <td> 0002218 // activation of innate immune response // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032606 // type I interferon production // traceable author statement /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // non-traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from physical interaction </td> <td> -34.08 </td> <td> 196.96 </td> <td> -1.60 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202043_s_at </td> <td> 202043_s_at </td> <td> NM_004595 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004595.1 /DEF=Homo sapiens spermine synthase (SMS), mRNA. /FEA=mRNA /GEN=SMS /PROD=spermine synthase /DB_XREF=gi:4759151 /UG=Hs.89718 spermine synthase /FL=gb:AD001528.1 gb:NM_004595.1 </td> <td> NM_004595 </td> <td> spermine synthase </td> <td> SMS </td> <td> 6611 </td> <td> NM_001258423 /// NM_004595 /// XM_005274582 /// XM_005274583 </td> <td> 0006555 // methionine metabolic process // traceable author statement /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004766 // spermidine synthase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016768 // spermine synthase activity // inferred from electronic annotation </td> <td> -32.68 </td> <td> 377.51 </td> <td> -1.60 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200024_at </td> <td> 200024_at </td> <td> NM_001009 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001009.1 /DEF=Homo sapiens ribosomal protein S5 (RPS5), mRNA. /FEA=mRNA /GEN=RPS5 /PROD=ribosomal protein S5 /DB_XREF=gi:4506728 /UG=Hs.76194 ribosomal protein S5 /FL=gb:NM_001009.1 gb:U14970.1 </td> <td> NM_001009 </td> <td> ribosomal protein S5 </td> <td> RPS5 </td> <td> 6193 </td> <td> NM_001009 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from genetic interaction /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006450 // regulation of translational fidelity // inferred from genetic interaction /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // non-traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -218.05 </td> <td> 2148.65 </td> <td> -1.60 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201551_s_at </td> <td> 201551_s_at </td> <td> J03263 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:J03263.1 /DEF=Human lysosome-associated membrane glycoprotein (lamp A) mRNA, complete cds.  /FEA=mRNA /GEN=LAMP1 /DB_XREF=gi:187178 /UG=Hs.150101 lysosomal-associated membrane protein 1 /FL=gb:J04182.1 gb:J03263.1 gb:NM_005561.2 </td> <td> J03263 </td> <td> lysosomal-associated membrane protein 1 </td> <td> LAMP1 </td> <td> 3916 </td> <td> NM_005561 </td> <td> 0006914 // autophagy // inferred from electronic annotation /// 0008626 // granzyme-mediated apoptotic signaling pathway // inferred from mutant phenotype /// 0043323 // positive regulation of natural killer cell degranulation // inferred from mutant phenotype /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0048102 // autophagic cell death // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0072594 // establishment of protein localization to organelle // inferred from mutant phenotype /// 0090160 // Golgi to lysosome transport // inferred from mutant phenotype /// 1902513 // regulation of organelle transport along microtubule // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005771 // multivesicular body // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044194 // cytolytic granule // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097208 // alveolar lamellar body // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> -81.08 </td> <td> 432.26 </td> <td> -1.60 </td> <td> 0.15 </td> <td> 0.21 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201772_at </td> <td> 201772_at </td> <td> NM_015878 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015878.1 /DEF=Homo sapiens antizyme inhibitor (LOC51582), mRNA. /FEA=mRNA /GEN=LOC51582 /PROD=antizyme inhibitor /DB_XREF=gi:7706219 /UG=Hs.223014 antizyme inhibitor /FL=gb:D88674.1 gb:NM_015878.1 </td> <td> NM_015878 </td> <td> antizyme inhibitor 1 </td> <td> AZIN1 </td> <td> 51582 </td> <td> NM_015878 /// NM_148174 /// XM_005250969 </td> <td> 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // traceable author statement /// 0042978 // ornithine decarboxylase activator activity // inferred from electronic annotation </td> <td> 31.55 </td> <td> 169.53 </td> <td> 1.60 </td> <td> 0.15 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 211965_at </td> <td> 211965_at </td> <td> BE620915 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE620915 /FEA=EST /DB_XREF=gi:9891853 /DB_XREF=est:601483777T1 /CLONE=IMAGE:3886194 /UG=Hs.85155 butyrate response factor 1 (EGF-response factor 1) </td> <td> BE620915 </td> <td> ZFP36 ring finger protein-like 1 </td> <td> ZFP36L1 </td> <td> 677 </td> <td> NM_001244698 /// NM_001244701 /// NM_004926 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -23.50 </td> <td> 62.95 </td> <td> -1.59 </td> <td> 0.15 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 217775_s_at </td> <td> 217775_s_at </td> <td> NM_016026 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016026.1 /DEF=Homo sapiens CGI-82 protein (LOC51109), mRNA. /FEA=mRNA /GEN=LOC51109 /PROD=CGI-82 protein /DB_XREF=gi:7705790 /UG=Hs.179817 CGI-82 protein /FL=gb:BC000112.1 gb:AF151840.1 gb:NM_016026.1 gb:AF167438.1 </td> <td> NM_016026 </td> <td> retinol dehydrogenase 11 (all-trans/9-cis/11-cis) </td> <td> RDH11 </td> <td> 51109 </td> <td> NM_001252650 /// NM_016026 </td> <td> 0001523 // retinoid metabolic process // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016062 // adaptation of rhodopsin mediated signaling // inferred from electronic annotation /// 0042572 // retinol metabolic process // inferred from sequence or structural similarity /// 0042574 // retinal metabolic process // inferred from direct assay /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004745 // retinol dehydrogenase activity // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from electronic annotation /// 0052650 // NADP-retinol dehydrogenase activity // inferred from direct assay </td> <td> 19.62 </td> <td> 101.26 </td> <td> 1.59 </td> <td> 0.15 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 208610_s_at </td> <td> 208610_s_at </td> <td> AI655799 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI655799 /FEA=EST /DB_XREF=gi:4739778 /DB_XREF=est:tt40a10.x1 /CLONE=IMAGE:2243226 /UG=Hs.197114 RNA binding protein; AT-rich element binding factor /FL=gb:AB016092.1 </td> <td> AI655799 </td> <td> serine/arginine repetitive matrix 2 </td> <td> SRRM2 </td> <td> 23524 </td> <td> NM_016333 /// XM_005255225 /// XM_005255226 /// XM_005255227 /// XM_006720872 /// XM_006720873 /// XM_006720874 /// XR_243270 /// XR_243271 /// XR_429640 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0070742 // C2H2 zinc finger domain binding // inferred from direct assay </td> <td> 21.45 </td> <td> 154.20 </td> <td> 1.59 </td> <td> 0.15 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201107_s_at </td> <td> 201107_s_at </td> <td> AI812030 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI812030 /FEA=EST /DB_XREF=gi:5398596 /DB_XREF=est:tw46c12.x1 /CLONE=IMAGE:2262742 /UG=Hs.87409 thrombospondin 1 /FL=gb:NM_003246.1 </td> <td> AI812030 </td> <td> thrombospondin 1 </td> <td> THBS1 </td> <td> 7057 </td> <td> NM_003246 </td> <td> 0000187 // activation of MAPK activity // inferred from mutant phenotype /// 0001666 // response to hypoxia // non-traceable author statement /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001953 // negative regulation of cell-matrix adhesion // inferred from direct assay /// 0002040 // sprouting angiogenesis // inferred from mutant phenotype /// 0002544 // chronic inflammatory response // inferred from expression pattern /// 0002576 // platelet degranulation // traceable author statement /// 0002581 // negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from direct assay /// 0002605 // negative regulation of dendritic cell antigen processing and presentation // inferred from direct assay /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from expression pattern /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007155 // cell adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from direct assay /// 0010748 // negative regulation of plasma membrane long-chain fatty acid transport // inferred from direct assay /// 0010751 // negative regulation of nitric oxide mediated signal transduction // inferred from direct assay /// 0010754 // negative regulation of cGMP-mediated signaling // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from direct assay /// 0010759 // positive regulation of macrophage chemotaxis // inferred from sequence or structural similarity /// 0010763 // positive regulation of fibroblast migration // inferred from direct assay /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0018149 // peptide cross-linking // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from direct assay /// 0032570 // response to progesterone // traceable author statement /// 0032695 // negative regulation of interleukin-12 production // inferred from direct assay /// 0032914 // positive regulation of transforming growth factor beta1 production // inferred from sequence or structural similarity /// 0033574 // response to testosterone // inferred from electronic annotation /// 0034605 // cellular response to heat // non-traceable author statement /// 0034976 // response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from expression pattern /// 0042535 // positive regulation of tumor necrosis factor biosynthetic process // inferred from direct assay /// 0043032 // positive regulation of macrophage activation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043652 // engulfment of apoptotic cell // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0048266 // behavioral response to pain // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050921 // positive regulation of chemotaxis // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0051895 // negative regulation of focal adhesion assembly // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling // inferred from direct assay /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071636 // positive regulation of transforming growth factor beta production // inferred from electronic annotation /// 1900119 // positive regulation of execution phase of apoptosis // inferred from direct assay /// 1902043 // positive regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005577 // fibrinogen complex // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from sequence or structural similarity /// 0030141 // secretory granule // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // traceable author statement /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001786 // phosphatidylserine binding // inferred from direct assay /// 0001948 // glycoprotein binding // non-traceable author statement /// 0001968 // fibronectin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from mutant phenotype /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0030169 // low-density lipoprotein particle binding // inferred from direct assay /// 0042802 // identical protein binding // non-traceable author statement /// 0043236 // laminin binding // inferred from direct assay /// 0043394 // proteoglycan binding // traceable author statement /// 0050431 // transforming growth factor beta binding // inferred from sequence or structural similarity /// 0050431 // transforming growth factor beta binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation /// 0070051 // fibrinogen binding // inferred from direct assay /// 0070052 // collagen V binding // inferred from direct assay </td> <td> -140.65 </td> <td> 507.57 </td> <td> -1.59 </td> <td> 0.15 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 217753_s_at </td> <td> 217753_s_at </td> <td> NM_001029 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001029.1 /DEF=Homo sapiens ribosomal protein S26 (RPS26), mRNA. /FEA=mRNA /GEN=RPS26 /PROD=ribosomal protein S26 /DB_XREF=gi:4506708 /UG=Hs.299465 ribosomal protein S26 /FL=gb:BC002604.1 gb:NM_001029.1 </td> <td> NM_001029 </td> <td> 40S ribosomal protein S26-like /// 40S ribosomal protein S26-like /// ribosomal protein S26 /// ribosomal protein S26 pseudogene 11 </td> <td> LOC100996747 /// LOC101929876 /// RPS26 /// RPS26P11 </td> <td> 6231 /// 441502 /// 100996747 /// 101929876 </td> <td> NM_001029 /// NR_002309 /// XM_003846538 /// XM_005276684 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003729 // mRNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 160.50 </td> <td> 1468.62 </td> <td> 1.59 </td> <td> 0.15 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 218076_s_at </td> <td> 218076_s_at </td> <td> NM_018054 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018054.1 /DEF=Homo sapiens homolog of rat nadrin (FLJ10308), mRNA. /FEA=mRNA /GEN=FLJ10308 /PROD=homolog of rat nadrin /DB_XREF=gi:8922343 /UG=Hs.14169 homolog of rat nadrin /FL=gb:AF113218.1 gb:NM_018054.1 </td> <td> NM_018054 </td> <td> Rho GTPase activating protein 17 </td> <td> ARHGAP17 </td> <td> 55114 </td> <td> NM_001006634 /// NM_018054 /// XM_005255413 /// XM_005255414 /// XM_006721057 /// XM_006721058 /// XM_006721059 /// XM_006721060 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation </td> <td> 89.03 </td> <td> 355.09 </td> <td> 1.59 </td> <td> 0.15 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200738_s_at </td> <td> 200738_s_at </td> <td> NM_000291 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000291.1 /DEF=Homo sapiens phosphoglycerate kinase 1 (PGK1), mRNA. /FEA=mRNA /GEN=PGK1 /PROD=phosphoglycerate kinase 1 /DB_XREF=gi:4505762 /UG=Hs.78771 phosphoglycerate kinase 1 /FL=gb:NM_000291.1 </td> <td> NM_000291 </td> <td> phosphoglycerate kinase 1 </td> <td> PGK1 </td> <td> 5230 </td> <td> NM_000291 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0006096 // glycolytic process // traceable author statement /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // not recorded /// 0004618 // phosphoglycerate kinase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -123.73 </td> <td> 1320.11 </td> <td> -1.59 </td> <td> 0.15 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 213614_x_at </td> <td> 213614_x_at </td> <td> BE786672 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE786672 /FEA=EST /DB_XREF=gi:10207870 /DB_XREF=est:601475022F1 /CLONE=IMAGE:3878140 /UG=Hs.284136 PRO2047 protein </td> <td> BE786672 </td> <td> eukaryotic translation elongation factor 1 alpha 1 </td> <td> EEF1A1 </td> <td> 1915 </td> <td> NM_001402 /// NM_001403 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005853 // eukaryotic translation elongation factor 1 complex // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0019901 // protein kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -667.48 </td> <td> 4635.96 </td> <td> -1.59 </td> <td> 0.15 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201012_at </td> <td> 201012_at </td> <td> NM_000700 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000700.1 /DEF=Homo sapiens annexin A1 (ANXA1), mRNA. /FEA=mRNA /GEN=ANXA1 /PROD=annexin I /DB_XREF=gi:4502100 /UG=Hs.78225 annexin A1 /FL=gb:BC001275.1 gb:NM_000700.1 </td> <td> NM_000700 </td> <td> annexin A1 </td> <td> ANXA1 </td> <td> 301 </td> <td> NM_000700 </td> <td> 0001780 // neutrophil homeostasis // inferred from mutant phenotype /// 0002674 // negative regulation of acute inflammatory response // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0009725 // response to hormone // inferred from electronic annotation /// 0010165 // response to X-ray // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0018149 // peptide cross-linking // inferred from direct assay /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from direct assay /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0031340 // positive regulation of vesicle fusion // inferred from direct assay /// 0031394 // positive regulation of prostaglandin biosynthetic process // inferred from electronic annotation /// 0031960 // response to corticosteroid // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0033031 // positive regulation of neutrophil apoptotic process // inferred from electronic annotation /// 0042063 // gliogenesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0046632 // alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0050482 // arachidonic acid secretion // inferred from electronic annotation /// 0050709 // negative regulation of protein secretion // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0060206 // estrous cycle phase // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0070365 // hepatocyte differentiation // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation /// 0071385 // cellular response to glucocorticoid stimulus // inferred from direct assay /// 0097350 // neutrophil clearance // inferred from mutant phenotype /// 1900087 // positive regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 2000483 // negative regulation of interleukin-8 secretion // inferred from mutant phenotype </td> <td> 0001533 // cornified envelope // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // traceable author statement /// 0005198 // structural molecule activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // traceable author statement /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0019834 // phospholipase A2 inhibitor activity // inferred from direct assay /// 0030674 // protein binding, bridging // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> -114.83 </td> <td> 1772.14 </td> <td> -1.59 </td> <td> 0.15 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201861_s_at </td> <td> 201861_s_at </td> <td> BF965566 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF965566 /FEA=EST /DB_XREF=gi:12332781 /DB_XREF=est:602277032F1 /CLONE=IMAGE:4364790 /UG=Hs.326159 leucine rich repeat (in FLII) interacting protein 1 /FL=gb:NM_004735.1 </td> <td> BF965566 </td> <td> leucine rich repeat (in FLII) interacting protein 1 </td> <td> LRRFIP1 </td> <td> 9208 </td> <td> NM_001137550 /// NM_001137551 /// NM_001137552 /// NM_001137553 /// NM_004735 /// XM_005246112 /// XM_005246113 /// XM_005246114 /// XM_005246115 /// XM_005246116 /// XM_005246117 /// XM_005246118 /// XM_005246119 /// XM_005246120 /// XM_005246121 /// XM_005246122 /// XM_005246123 /// XM_005246124 /// XM_005246125 /// XM_005246126 /// XM_005246127 /// XM_005246128 /// XM_005246129 /// XM_005246130 /// XM_005246131 /// XM_005246132 /// XM_005246133 /// XM_005246134 /// XM_005246135 /// XM_005246136 /// XM_005246137 /// XM_005246138 /// XM_005246139 /// XM_005246140 /// XM_005246141 /// XM_005246142 /// XM_006712840 /// XM_006712841 /// XM_006712842 /// XM_006712843 /// XM_006712844 /// XM_006712845 /// XM_006712846 /// XM_006712847 /// XM_006712848 /// XM_006712849 /// XM_006712850 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> -23.97 </td> <td> 122.79 </td> <td> -1.58 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 212012_at </td> <td> 212012_at </td> <td> BF342851 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF342851 /FEA=EST /DB_XREF=gi:11289878 /DB_XREF=est:602015135F1 /CLONE=IMAGE:4150664 /UG=Hs.118893 Melanoma associated gene </td> <td> BF342851 </td> <td> peroxidasin homolog (Drosophila) </td> <td> PXDN </td> <td> 7837 </td> <td> NM_012293 /// XM_005264707 /// XM_006711896 </td> <td> 0001960 // negative regulation of cytokine-mediated signaling pathway // non-traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from direct assay /// 0042744 // hydrogen peroxide catabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay </td> <td> 0004601 // peroxidase activity // inferred from direct assay /// 0005152 // interleukin-1 receptor antagonist activity // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -92.55 </td> <td> 743.38 </td> <td> -1.58 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 219960_s_at </td> <td> 219960_s_at </td> <td> NM_015984 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015984.1 /DEF=Homo sapiens ubiquitin C-terminal hydrolase UCH37 (UCH37), mRNA. /FEA=mRNA /GEN=UCH37 /PROD=ubiquitin C-terminal hydrolase UCH37 /DB_XREF=gi:7706752 /UG=Hs.171581 ubiquitin C-terminal hydrolase UCH37 /FL=gb:AF147717.1 gb:NM_015984.1 </td> <td> NM_015984 </td> <td> ubiquitin carboxyl-terminal hydrolase L5 </td> <td> UCHL5 </td> <td> 51377 </td> <td> NM_001199261 /// NM_001199262 /// NM_001199263 /// NM_015984 /// NR_037607 /// XM_005245244 /// XM_005245245 /// XM_005245246 /// XM_005245247 /// XM_005245248 /// XM_005245249 /// XM_006711366 /// XM_006711367 /// XM_006711368 /// XM_006711369 /// XM_006711370 /// XM_006711371 /// XM_006711372 /// XM_006711373 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0010951 // negative regulation of endopeptidase activity // inferred from mutant phenotype /// 0016579 // protein deubiquitination // inferred from direct assay /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030901 // midbrain development // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from electronic annotation /// 0061136 // regulation of proteasomal protein catabolic process // inferred from mutant phenotype </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0031011 // Ino80 complex // inferred from direct assay </td> <td> 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004866 // endopeptidase inhibitor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008242 // omega peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070628 // proteasome binding // inferred from direct assay </td> <td> 24.12 </td> <td> 218.19 </td> <td> 1.58 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 217728_at </td> <td> 217728_at </td> <td> NM_014624 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014624.2 /DEF=Homo sapiens S100 calcium-binding protein A6 (calcyclin) (S100A6), mRNA.  /FEA=mRNA /GEN=S100A6 /PROD=S100 calcium-binding protein A6 /DB_XREF=gi:9845517 /UG=Hs.275243 S100 calcium-binding protein A6 (calcyclin) /FL=gb:BC001431.1 gb:NM_014624.2 </td> <td> NM_014624 </td> <td> S100 calcium binding protein A6 </td> <td> S100A6 </td> <td> 6277 </td> <td> NM_014624 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007409 // axonogenesis // non-traceable author statement /// 0034220 // ion transmembrane transport // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // non-traceable author statement </td> <td> 0001726 // ruffle // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005523 // tropomyosin binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015075 // ion transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from direct assay </td> <td> 289.62 </td> <td> 2109.64 </td> <td> 1.58 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 212346_s_at </td> <td> 212346_s_at </td> <td> AK026392 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026392.1 /DEF=Homo sapiens cDNA: FLJ22739 fis, clone HUV00686. /FEA=mRNA /DB_XREF=gi:10439242 /UG=Hs.102402 Mad4 homolog </td> <td> AK026392 </td> <td> microRNA 4800 /// MAX dimerization protein 4 </td> <td> MIR4800 /// MXD4 </td> <td> 10608 /// 100616358 </td> <td> NM_006454 /// NR_039964 /// XR_427467 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> 26.05 </td> <td> 70.17 </td> <td> 1.58 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200729_s_at </td> <td> 200729_s_at </td> <td> NM_005722 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005722.1 /DEF=Homo sapiens ARP2 (actin-related protein 2, yeast) homolog (ACTR2), mRNA.  /FEA=mRNA /GEN=ACTR2 /PROD=ARP2 (actin-related protein 2, yeast) homolog /DB_XREF=gi:5031570 /UG=Hs.42915 ARP2 (actin-related protein 2, yeast) homolog /FL=gb:AF006082.1 gb:NM_005722.1 </td> <td> NM_005722 </td> <td> ARP2 actin-related protein 2 homolog (yeast) </td> <td> ACTR2 </td> <td> 10097 </td> <td> NM_001005386 /// NM_005722 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0008356 // asymmetric cell division // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation /// 0033206 // meiotic cytokinesis // inferred from electronic annotation /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051321 // meiotic cell cycle // inferred from electronic annotation /// 0051653 // spindle localization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // inferred from reviewed computational analysis /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030478 // actin cap // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> 60.28 </td> <td> 564.49 </td> <td> 1.57 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 217932_at </td> <td> 217932_at </td> <td> NM_015971 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015971.1 /DEF=Homo sapiens 30S ribosomal protein S7 homolog (LOC51081), mRNA. /FEA=mRNA /GEN=LOC51081 /PROD=30S ribosomal protein S7 homolog /DB_XREF=gi:7705737 /UG=Hs.71787 30S ribosomal protein S7 homolog /FL=gb:BC000241.1 gb:AF077042.1 gb:NM_015971.1 </td> <td> NM_015971 </td> <td> mitochondrial ribosomal protein S7 </td> <td> MRPS7 </td> <td> 51081 </td> <td> NM_015971 /// XM_005257424 </td> <td> 0006412 // translation // inferred from sequence or structural similarity </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from sequence or structural similarity /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from sequence or structural similarity /// 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 24.05 </td> <td> 189.18 </td> <td> 1.57 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 203647_s_at </td> <td> 203647_s_at </td> <td> M18003 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M18003.1 /DEF=Human ferredoxin mRNA, complete cds. /FEA=mRNA /PROD=ferredoxin /DB_XREF=gi:182493 /UG=Hs.744 ferredoxin 1 /FL=gb:NM_004109.2 gb:J03548.1 gb:M18003.1 gb:M34788.1 </td> <td> M18003 </td> <td> ferredoxin 1 </td> <td> FDX1 </td> <td> 2230 </td> <td> NM_004109 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from direct assay /// 0042446 // hormone biosynthetic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0005506 // iron ion binding // traceable author statement /// 0009055 // electron carrier activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from direct assay </td> <td> 34.82 </td> <td> 191.66 </td> <td> 1.57 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200098_s_at </td> <td> 200098_s_at </td> <td> T33068 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:T33068 /FEA=EST /DB_XREF=gi:615166 /DB_XREF=est:EST56576 /UG=Hs.7101 anaphase-promoting complex subunit 5 </td> <td> T33068 </td> <td> anaphase promoting complex subunit 5 </td> <td> ANAPC5 </td> <td> 51433 </td> <td> NM_001137559 /// NM_016237 /// XM_005253900 /// XM_006719449 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000090 // mitotic anaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction </td> <td> 71.53 </td> <td> 472.59 </td> <td> 1.57 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 160020_at </td> <td> 160020_at </td> <td> Z48481 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Z48481 /FEATURE=cds /DEFINITION=HSMMPM1 H.sapiens mRNA for membrane-type matrix metalloproteinase 1 /NOTE=replacement of probe set 1301_s_at </td> <td> Z48481 </td> <td> matrix metallopeptidase 14 (membrane-inserted) </td> <td> MMP14 </td> <td> 4323 </td> <td> NM_004995 </td> <td> 0001503 // ossification // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001935 // endothelial cell proliferation // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009725 // response to hormone // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030574 // collagen catabolic process // traceable author statement /// 0031638 // zymogen activation // inferred from electronic annotation /// 0043615 // astrocyte cell migration // inferred from electronic annotation /// 0043627 // response to estrogen // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0048771 // tissue remodeling // inferred from electronic annotation /// 0051895 // negative regulation of focal adhesion assembly // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 58.58 </td> <td> 334.14 </td> <td> 1.57 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201946_s_at </td> <td> 201946_s_at </td> <td> AL545982 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL545982 /FEA=EST /DB_XREF=gi:12878676 /DB_XREF=est:AL545982 /CLONE=CS0DI023YD15 (5 prime) /UG=Hs.6456 chaperonin containing TCP1, subunit 2 (beta) /FL=gb:AF026293.1 gb:AF026166.1 gb:NM_006431.1 </td> <td> AL545982 </td> <td> chaperonin containing TCP1, subunit 2 (beta) </td> <td> CCT2 </td> <td> 10576 </td> <td> NM_001198842 /// NM_006431 </td> <td> 0006457 // protein folding // non-traceable author statement /// 0006457 // protein folding // traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051131 // chaperone-mediated protein complex assembly // inferred from mutant phenotype </td> <td> 0002199 // zona pellucida receptor complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement </td> <td> 83.00 </td> <td> 615.88 </td> <td> 1.57 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 209069_s_at </td> <td> 209069_s_at </td> <td> BC001124 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001124.1 /DEF=Homo sapiens, H3 histone, family 3A, clone MGC:2161, mRNA, complete cds.  /FEA=mRNA /PROD=H3 histone, family 3A /DB_XREF=gi:12654576 /UG=Hs.181307 H3 histone, family 3A /FL=gb:BC001124.1 </td> <td> BC001124 </td> <td> H3 histone, family 3A /// H3 histone, family 3B (H3.3B) /// microRNA 4738 </td> <td> H3F3A /// H3F3B /// MIR4738 </td> <td> 3020 /// 3021 /// 100616282 </td> <td> NM_002107 /// NM_005324 /// NR_039892 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype </td> <td> 0000228 // nuclear chromosome // inferred from direct assay /// 0000786 // nucleosome // inferred from electronic annotation /// 0000788 // nuclear nucleosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -103.78 </td> <td> 1169.91 </td> <td> -1.57 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 209109_s_at </td> <td> 209109_s_at </td> <td> U84895 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U84895.1 /DEF=Human transmembrane 4 superfamily A15 homolog mRNA, complete cds. /FEA=mRNA /PROD=A15 homolog /DB_XREF=gi:4099210 /UG=Hs.121068 transmembrane 4 superfamily member 6 /FL=gb:AF043906.1 gb:AF053453.1 gb:U84895.1 gb:NM_003270.1 gb:AF133426.1 </td> <td> U84895 </td> <td> tetraspanin 6 </td> <td> TSPAN6 </td> <td> 7105 </td> <td> NM_001278740 /// NM_001278741 /// NM_001278742 /// NM_001278743 /// NM_003270 </td> <td> 0007165 // signal transduction // inferred from mutant phenotype /// 0039532 // negative regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 1901223 // negative regulation of NIK/NF-kappaB signaling // inferred from direct assay </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction </td> <td> 59.65 </td> <td> 253.20 </td> <td> 1.56 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201922_at </td> <td> 201922_at </td> <td> NM_014886 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014886.1 /DEF=Homo sapiens hypothetical protein (YR-29), mRNA. /FEA=mRNA /GEN=YR-29 /PROD=hypothetical protein /DB_XREF=gi:7662676 /UG=Hs.8170 hypothetical protein /FL=gb:AF077615.1 gb:BC005288.1 gb:NM_014886.1 </td> <td> NM_014886 </td> <td> NSA2 ribosome biogenesis homolog (S. cerevisiae) </td> <td> NSA2 </td> <td> 10412 </td> <td> NM_001271665 /// NM_014886 /// NR_073403 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -31.20 </td> <td> 509.62 </td> <td> -1.56 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 213627_at </td> <td> 213627_at </td> <td> AI924630 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI924630 /FEA=EST /DB_XREF=gi:5660594 /DB_XREF=est:wn57e10.x1 /CLONE=IMAGE:2449578 /UG=Hs.4943 hepatocellular carcinoma associated protein; breast cancer associated gene 1 </td> <td> AI924630 </td> <td> melanoma antigen family D, 2 </td> <td> MAGED2 </td> <td> 10916 </td> <td> NM_014599 /// NM_177433 /// NM_201222 </td> <td>  </td> <td> 0016020 // membrane // inferred from direct assay </td> <td>  </td> <td> 122.05 </td> <td> 248.10 </td> <td> 1.56 </td> <td> 0.16 </td> <td> 0.22 </td> <td> -4.57 </td> </tr>
  <tr> <td> 56197_at </td> <td> 56197_at </td> <td> AI783924 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI783924:tr30e11.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2219852 /clone_end=3' /gb=AI783924 /gi=5325733 /ug=Hs.103382 /len=539 </td> <td> AI783924 </td> <td> phospholipid scramblase 3 /// TMEM256-PLSCR3 readthrough (NMD candidate) </td> <td> PLSCR3 /// TMEM256-PLSCR3 </td> <td> 57048 /// 100529211 </td> <td> NM_001201576 /// NM_020360 /// NR_037719 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0017121 // phospholipid scrambling // non-traceable author statement /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0017128 // phospholipid scramblase activity // non-traceable author statement /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> -47.50 </td> <td> 640.60 </td> <td> -1.56 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 209372_x_at </td> <td> 209372_x_at </td> <td> BF971587 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF971587 /FEA=EST /DB_XREF=gi:12338802 /DB_XREF=est:602239834F1 /CLONE=IMAGE:4328385 /UG=Hs.179661 tubulin, beta polypeptide /FL=gb:BC001352.1 </td> <td> BF971587 </td> <td> tubulin, beta 2A class IIa /// tubulin, beta 2B class IIb </td> <td> TUBB2A /// TUBB2B </td> <td> 7280 /// 347733 </td> <td> NM_001069 /// NM_178012 </td> <td> 0001764 // neuron migration // inferred from mutant phenotype /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 26.83 </td> <td> 86.79 </td> <td> 1.56 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 203202_at </td> <td> 203202_at </td> <td> AI950314 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI950314 /FEA=EST /DB_XREF=gi:5742624 /DB_XREF=est:wp08c11.x1 /CLONE=IMAGE:2464244 /UG=Hs.154762 HIV-1 rev binding protein 2 /FL=gb:U55766.1 gb:NM_007043.1 </td> <td> AI950314 </td> <td> KRR1, small subunit (SSU) processome component, homolog (yeast) </td> <td> KRR1 </td> <td> 11103 </td> <td> NM_007043 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0045171 // intercellular bridge // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 19.55 </td> <td> 118.03 </td> <td> 1.56 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 208796_s_at </td> <td> 208796_s_at </td> <td> BC000196 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000196.1 /DEF=Homo sapiens, cyclin G1, clone MGC:643, mRNA, complete cds. /FEA=mRNA /PROD=cyclin G1 /DB_XREF=gi:12652880 /UG=Hs.79101 cyclin G1 /FL=gb:L49504.1 gb:U47413.1 gb:BC000196.1 gb:D78341.1 gb:NM_004060.2 </td> <td> BC000196 </td> <td> cyclin G1 </td> <td> CCNG1 </td> <td> 900 </td> <td> NM_004060 /// NM_199246 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0006949 // syncytium formation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007095 // mitotic G2 DNA damage checkpoint // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 78.02 </td> <td> 670.56 </td> <td> 1.56 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202669_s_at </td> <td> 202669_s_at </td> <td> U16797 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U16797.1 /DEF=Human LERK-5 (EPLG5) mRNA, complete cds. /FEA=mRNA /GEN=EPLG5 /PROD=LERK-5 /DB_XREF=gi:902370 /UG=Hs.30942 ephrin-B2 /FL=gb:U81262.1 gb:NM_004093.1 gb:L38734.1 gb:U16797.1 </td> <td> U16797 </td> <td> ephrin-B2 </td> <td> EFNB2 </td> <td> 1948 </td> <td> NM_004093 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0007155 // cell adhesion // inferred from direct assay /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // not recorded /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010839 // negative regulation of keratinocyte proliferation // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050920 // regulation of chemotaxis // inferred from direct assay /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from sequence or structural similarity </td> <td> 0005886 // plasma membrane // not recorded /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from physical interaction </td> <td> -50.82 </td> <td> 148.91 </td> <td> -1.56 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 219220_x_at </td> <td> 219220_x_at </td> <td> NM_020191 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020191.1 /DEF=Homo sapiens GK002 protein (GK002), mRNA. /FEA=mRNA /GEN=GK002 /PROD=GK002 protein /DB_XREF=gi:9910243 /UG=Hs.107127 GK002 protein; gibt protein; chromosome 3 open reading frame 5 /FL=gb:AF321613.1 gb:AF226045.1 gb:NM_020191.1 </td> <td> NM_020191 </td> <td> mitochondrial ribosomal protein S22 </td> <td> MRPS22 </td> <td> 56945 </td> <td> NM_020191 /// XM_005247640 /// XM_006713703 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005763 // mitochondrial small ribosomal subunit // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from direct assay </td> <td> 26.87 </td> <td> 227.34 </td> <td> 1.56 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 203041_s_at </td> <td> 203041_s_at </td> <td> J04183 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:J04183.1 /DEF=Homo sapiens lysosomal membrane glycoprotein-2 (LAMP2), complete cds.  /FEA=mRNA /GEN=LAMP2 /PROD=lysosomal membrane glycoprotein-2 /DB_XREF=gi:186929 /UG=Hs.8262 lysosomal-associated membrane protein 2 /FL=gb:J04183.1 gb:NM_002294.1 </td> <td> J04183 </td> <td> lysosomal-associated membrane protein 2 </td> <td> LAMP2 </td> <td> 3920 </td> <td> NM_001122606 /// NM_002294 /// NM_013995 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0050821 // protein stabilization // inferred from sequence or structural similarity </td> <td> 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031088 // platelet dense granule membrane // traceable author statement /// 0031902 // late endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0019899 // enzyme binding // inferred from physical interaction </td> <td> -52.35 </td> <td> 394.32 </td> <td> -1.56 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 217817_at </td> <td> 217817_at </td> <td> BE891920 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE891920 /FEA=EST /DB_XREF=gi:10351728 /DB_XREF=est:601435490F1 /CLONE=IMAGE:3920590 /UG=Hs.323342 actin related protein 23 complex, subunit 4 (20 kD) /FL=gb:AF006087.1 gb:NM_005718.1 </td> <td> BE891920 </td> <td> actin related protein 2/3 complex, subunit 4, 20kDa </td> <td> ARPC4 </td> <td> 10093 </td> <td> NM_001024959 /// NM_001024960 /// NM_001198780 /// NM_005718 </td> <td> 0030041 // actin filament polymerization // inferred from electronic annotation /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045010 // actin nucleation // non-traceable author statement /// 0045087 // innate immune response // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030674 // protein binding, bridging // inferred from physical interaction /// 0051015 // actin filament binding // non-traceable author statement </td> <td> 90.12 </td> <td> 105.86 </td> <td> 1.55 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200827_at </td> <td> 200827_at </td> <td> NM_000302 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000302.1 /DEF=Homo sapiens procollagen-lysine, 2-oxoglutarate 5-dioxygenase (lysine hydroxylase, Ehlers-Danlos syndrome type VI) (PLOD), mRNA.  /FEA=mRNA /GEN=PLOD /PROD=procollagen-lysine 5-dioxygenase /DB_XREF=gi:4557836 /UG=Hs.75093 procollagen-lysine, 2-oxoglutarate 5-dioxygenase (lysine hydroxylase, Ehlers-Danlos syndrome type VI) /FL=gb:L06419.1 gb:NM_000302.1 </td> <td> NM_000302 </td> <td> procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 </td> <td> PLOD1 </td> <td> 5351 </td> <td> NM_000302 </td> <td> 0001666 // response to hypoxia // inferred from expression pattern /// 0006464 // cellular protein modification process // non-traceable author statement /// 0008544 // epidermis development // inferred from mutant phenotype /// 0008544 // epidermis development // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0046947 // hydroxylysine biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement </td> <td> 0005581 // collagen trimer // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030867 // rough endoplasmic reticulum membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005506 // iron ion binding // inferred from electronic annotation /// 0008475 // procollagen-lysine 5-dioxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -40.15 </td> <td> 336.23 </td> <td> -1.55 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 210564_x_at </td> <td> 210564_x_at </td> <td> AF009619 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF009619.1 /DEF=Homo sapiens FLAME-1-delta mRNA, alternatively spliced, complete cds.  /FEA=mRNA /PROD=FLAME-1-delta /DB_XREF=gi:2429159 /UG=Hs.195175 CASP8 and FADD-like apoptosis regulator /FL=gb:AF009619.1 </td> <td> AF009619 </td> <td> CASP8 and FADD-like apoptosis regulator </td> <td> CFLAR </td> <td> 8837 </td> <td> NM_001127183 /// NM_001127184 /// NM_001202515 /// NM_001202516 /// NM_001202517 /// NM_001202518 /// NM_001202519 /// NM_003879 /// XM_005246935 /// XM_005246936 /// XM_005246937 /// XM_005246938 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from sequence or structural similarity /// 0014732 // skeletal muscle atrophy // inferred from sequence or structural similarity /// 0014842 // regulation of satellite cell proliferation // inferred from sequence or structural similarity /// 0014866 // skeletal myofibril assembly // inferred from sequence or structural similarity /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043403 // skeletal muscle tissue regeneration // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0060544 // regulation of necroptotic process // inferred from direct assay /// 0097190 // apoptotic signaling pathway // traceable author statement /// 1901740 // negative regulation of myoblast fusion // inferred from sequence or structural similarity /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0031264 // death-inducing signaling complex // inferred from direct assay /// 0031265 // CD95 death-inducing signaling complex // inferred from electronic annotation /// 0097342 // ripoptosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0004197 // cysteine-type endopeptidase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // inferred from direct assay /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0035877 // death effector domain binding // not recorded </td> <td> -25.58 </td> <td> 146.94 </td> <td> -1.55 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 213513_x_at </td> <td> 213513_x_at </td> <td> BG034239 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG034239 /FEA=EST /DB_XREF=gi:12427339 /DB_XREF=est:602302301F1 /CLONE=IMAGE:4403617 /UG=Hs.252280 Rho guanine nucleotide exchange factor (GEF) 1 </td> <td> BG034239 </td> <td> actin related protein 2/3 complex, subunit 2, 34kDa </td> <td> ARPC2 </td> <td> 10109 </td> <td> NM_005731 /// NM_152862 /// XM_006712173 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0010592 // positive regulation of lamellipodium assembly // inferred from mutant phenotype /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from electronic annotation /// 0035650 // AP-1 adaptor complex binding // inferred from electronic annotation /// 0071933 // Arp2/3 complex binding // inferred from electronic annotation </td> <td> -61.05 </td> <td> 746.88 </td> <td> -1.55 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 206920_s_at </td> <td> 206920_s_at </td> <td> NM_001499 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001499.1 /DEF=Homo sapiens GLE1 (yeast homolog)-like, RNA export mediator (GLE1L), mRNA.  /FEA=mRNA /GEN=GLE1L /PROD=GLE1-like, RNA export mediator /DB_XREF=gi:4557626 /UG=Hs.169363 GLE1 (yeast homolog)-like, RNA export mediator /FL=gb:AF058922.1 gb:NM_001499.1 </td> <td> NM_001499 </td> <td> GLE1 RNA export mediator </td> <td> GLE1 </td> <td> 2733 </td> <td> NM_001003722 /// NM_001499 /// XM_005251925 /// XM_006717058 /// XM_006717059 /// XM_006717060 /// XM_006717061 </td> <td> 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016973 // poly(A)+ mRNA export from nucleus // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -24.95 </td> <td> 64.95 </td> <td> -1.55 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 221012_s_at </td> <td> 221012_s_at </td> <td> NM_030912 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030912.1 /DEF=Homo sapiens tripartite motif protein TRIM8 (TRIM8), mRNA. /FEA=mRNA /GEN=TRIM8 /PROD=tripartite motif protein TRIM8 /DB_XREF=gi:13569865 /FL=gb:NM_030912.1 </td> <td> NM_030912 </td> <td> tripartite motif containing 8 </td> <td> TRIM8 </td> <td> 81603 </td> <td> NM_030912 /// XM_006717988 /// XM_006717989 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0045087 // innate immune response // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 1902187 // negative regulation of viral release from host cell // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 28.00 </td> <td> 146.25 </td> <td> 1.55 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200095_x_at </td> <td> 200095_x_at </td> <td> AA320764 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA320764 /FEA=EST /DB_XREF=gi:1973113 /DB_XREF=est:EST23183 /UG=Hs.76230 ribosomal protein S10 </td> <td> AA320764 </td> <td> ribosomal protein S10 </td> <td> RPS10 </td> <td> 6204 </td> <td> NM_001014 /// NM_001203245 /// NM_001204091 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015961 // diadenosine polyphosphate catabolic process // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0071544 // diphosphoinositol polyphosphate catabolic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from direct assay /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from electronic annotation /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052840 // inositol diphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052841 // inositol bisdiphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052842 // inositol diphosphate pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052843 // inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052844 // inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052845 // inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052846 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity // inferred from electronic annotation /// 0052847 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation /// 0052848 // inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation </td> <td> -299.20 </td> <td> 4609.18 </td> <td> -1.55 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 217963_s_at </td> <td> 217963_s_at </td> <td> NM_014380 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014380.1 /DEF=Homo sapiens p75NTR-associated cell death executor; ovarian granulosa cell protein (13kD) (DXS6984E), mRNA.  /FEA=mRNA /GEN=DXS6984E /PROD=p75NTR-associated cell death executor; ovariangranulosa cell protein (13kD) /DB_XREF=gi:7657043 /UG=Hs.17775 p75NTR-associated cell death executor; ovarian granulosa cell protein (13kD) /FL=gb:NM_014380.1 gb:AF187064.1 </td> <td> NM_014380 </td> <td> nerve growth factor receptor (TNFRSF16) associated protein 1 </td> <td> NGFRAP1 </td> <td> 27018 </td> <td> NM_001282674 /// NM_014380 /// NM_206915 /// NM_206917 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from electronic annotation /// 0043281 // regulation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005123 // death receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 155.60 </td> <td> 2062.00 </td> <td> 1.55 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202538_s_at </td> <td> 202538_s_at </td> <td> NM_014043 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014043.1 /DEF=Homo sapiens DKFZP564O123 protein (DKFZP564O123), mRNA. /FEA=mRNA /GEN=DKFZP564O123 /PROD=DKFZP564O123 protein /DB_XREF=gi:7661633 /UG=Hs.11449 DKFZP564O123 protein /FL=gb:AF151842.1 gb:AL080122.1 gb:NM_014043.1 </td> <td> NM_014043 </td> <td> charged multivesicular body protein 2B </td> <td> CHMP2B </td> <td> 25978 </td> <td> NM_001244644 /// NM_014043 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction </td> <td> 25.28 </td> <td> 147.14 </td> <td> 1.55 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200916_at </td> <td> 200916_at </td> <td> NM_003564 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003564.1 /DEF=Homo sapiens transgelin 2 (TAGLN2), mRNA. /FEA=mRNA /GEN=TAGLN2 /PROD=transgelin 2 /DB_XREF=gi:4507356 /UG=Hs.75725 transgelin 2 /FL=gb:D21261.1 gb:NM_003564.1 </td> <td> NM_003564 </td> <td> transgelin 2 </td> <td> TAGLN2 </td> <td> 8407 </td> <td> NM_001277223 /// NM_001277224 /// NM_003564 </td> <td> 0007517 // muscle organ development // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from direct assay </td> <td> 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -97.05 </td> <td> 1371.85 </td> <td> -1.54 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201255_x_at </td> <td> 201255_x_at </td> <td> NM_004639 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004639.1 /DEF=Homo sapiens HLA-B associated transcript-3 (D6S52E), mRNA. /FEA=mRNA /GEN=D6S52E /PROD=HLA-B associated transcript-3 /DB_XREF=gi:4758109 /UG=Hs.274348 HLA-B associated transcript-3 /FL=gb:M33519.1 gb:NM_004639.1 </td> <td> NM_004639 </td> <td> BCL2-associated athanogene 6 </td> <td> BAG6 </td> <td> 7917 </td> <td> NM_001098534 /// NM_001199697 /// NM_001199698 /// NM_004639 /// NM_080702 /// NM_080703 /// XM_005249393 /// XM_005249396 /// XM_005272880 /// XM_005272883 /// XM_005275034 /// XM_005275037 /// XM_005275169 /// XM_005275172 /// XM_005275292 /// XM_005275295 /// XM_005275464 /// XM_005275468 /// XM_005275597 /// XM_005275601 /// XM_006715192 /// XM_006715193 /// XM_006715194 /// XM_006715195 /// XM_006715196 /// XM_006715197 /// XM_006715198 /// XM_006715199 /// XM_006715200 /// XM_006715201 /// XM_006715202 /// XM_006715203 /// XM_006725509 /// XM_006725510 /// XM_006725511 /// XM_006725512 /// XM_006725513 /// XM_006725514 /// XM_006725515 /// XM_006725516 /// XM_006725517 /// XM_006725518 /// XM_006725519 /// XM_006725520 /// XM_006725725 /// XM_006725726 /// XM_006725727 /// XM_006725728 /// XM_006725729 /// XM_006725730 /// XM_006725731 /// XM_006725732 /// XM_006725733 /// XM_006725734 /// XM_006725735 /// XM_006725736 /// XM_006725835 /// XM_006725836 /// XM_006725837 /// XM_006725838 /// XM_006725839 /// XM_006725840 /// XM_006725841 /// XM_006725842 /// XM_006725843 /// XM_006725844 /// XM_006725845 /// XM_006725846 /// XM_006725923 /// XM_006725924 /// XM_006725925 /// XM_006725926 /// XM_006725927 /// XM_006725928 /// XM_006725929 /// XM_006725930 /// XM_006725931 /// XM_006725932 /// XM_006725933 /// XM_006725934 /// XM_006726025 /// XM_006726026 /// XM_006726027 /// XM_006726028 /// XM_006726029 /// XM_006726030 /// XM_006726031 /// XM_006726032 /// XM_006726033 /// XM_006726034 /// XM_006726035 /// XM_006726036 /// XM_006726113 /// XM_006726114 /// XM_006726115 /// XM_006726116 /// XM_006726117 /// XM_006726118 /// XM_006726119 /// XM_006726120 /// XM_006726121 /// XM_006726122 /// XM_006726123 /// XM_006726124 </td> <td> 0001822 // kidney development // inferred from sequence or structural similarity /// 0002376 // immune system process // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007130 // synaptonemal complex assembly // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0016568 // chromatin modification // inferred from electronic annotation /// 0018393 // internal peptidyl-lysine acetylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from sequence or structural similarity /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from mutant phenotype /// 0045861 // negative regulation of proteolysis // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0071818 // BAT3 complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030544 // Hsp70 protein binding // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from sequence or structural similarity /// 0043022 // ribosome binding // inferred from direct assay /// 0070628 // proteasome binding // inferred from sequence or structural similarity </td> <td> -51.85 </td> <td> 303.38 </td> <td> -1.54 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200626_s_at </td> <td> 200626_s_at </td> <td> NM_018834 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018834.1 /DEF=Homo sapiens matrin 3 (MATR3), mRNA. /FEA=mRNA /GEN=MATR3 /PROD=matrin 3 /DB_XREF=gi:10047081 /UG=Hs.78825 matrin 3 /FL=gb:NM_018834.1 gb:AB018266.1 </td> <td> NM_018834 </td> <td> matrin 3 /// small nucleolar RNA host gene 4 (non-protein coding) </td> <td> MATR3 /// SNHG4 </td> <td> 9782 /// 724102 </td> <td> NM_001194954 /// NM_001194955 /// NM_001194956 /// NM_001282278 /// NM_018834 /// NM_199189 /// NR_003141 /// NR_036536 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005637 // nuclear inner membrane // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 102.37 </td> <td> 512.44 </td> <td> 1.54 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 210896_s_at </td> <td> 210896_s_at </td> <td> AF306765 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF306765.1 /DEF=Homo sapiens junctate mRNA, complete cds. /FEA=mRNA /PROD=junctate /DB_XREF=gi:11991236 /UG=Hs.283664 aspartate beta-hydroxylase /FL=gb:AF306765.1 </td> <td> AF306765 </td> <td> aspartate beta-hydroxylase </td> <td> ASPH </td> <td> 444 </td> <td> NM_001164750 /// NM_001164751 /// NM_001164752 /// NM_001164753 /// NM_001164754 /// NM_001164755 /// NM_001164756 /// NM_004318 /// NM_020164 /// NM_032466 /// NM_032467 /// NM_032468 /// XM_005251235 /// XM_005251236 /// XM_005251238 /// XM_005251239 /// XM_005251240 /// XM_005251241 /// XM_005251242 /// XM_005251243 /// XM_005251244 /// XM_005251246 /// XM_005251247 /// XM_005251248 /// XM_005251249 /// XM_005251250 /// XM_006716448 /// XM_006716449 </td> <td> 0005513 // detection of calcium ion // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from direct assay /// 0010649 // regulation of cell communication by electrical coupling // traceable author statement /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // traceable author statement /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred from sequence or structural similarity /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // traceable author statement /// 0018193 // peptidyl-amino acid modification // inferred from electronic annotation /// 0031585 // regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from direct assay /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032237 // activation of store-operated calcium channel activity // inferred from direct assay /// 0033198 // response to ATP // inferred from direct assay /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0042264 // peptidyl-aspartic acid hydroxylation // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060316 // positive regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0090316 // positive regulation of intracellular protein transport // inferred from direct assay /// 0097202 // activation of cysteine-type endopeptidase activity // inferred from direct assay /// 1901879 // regulation of protein depolymerization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // non-traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0014701 // junctional sarcoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay /// 0032541 // cortical endoplasmic reticulum // inferred from direct assay /// 0033017 // sarcoplasmic reticulum membrane // traceable author statement /// 0033018 // sarcoplasmic reticulum lumen // traceable author statement /// 0034704 // calcium channel complex // traceable author statement </td> <td> 0004597 // peptide-aspartate beta-dioxygenase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0044325 // ion channel binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> 27.40 </td> <td> 145.30 </td> <td> 1.54 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200697_at </td> <td> 200697_at </td> <td> NM_000188 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000188.1 /DEF=Homo sapiens hexokinase 1 (HK1), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=HK1 /PROD=hexokinase 1 /DB_XREF=gi:4504390 /UG=Hs.118625 hexokinase 1 /FL=gb:M75126.1 gb:NM_000188.1 </td> <td> NM_000188 </td> <td> hexokinase 1 </td> <td> HK1 </td> <td> 3098 </td> <td> NM_000188 /// NM_033496 /// NM_033497 /// NM_033498 /// NM_033500 /// XM_005269735 /// XM_005269736 /// XM_005269737 </td> <td> 0001678 // cellular glucose homeostasis // not recorded /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006096 // glycolytic process // not recorded /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019318 // hexose metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046835 // carbohydrate phosphorylation // not recorded /// 0046835 // carbohydrate phosphorylation // inferred from electronic annotation /// 0046835 // carbohydrate phosphorylation // traceable author statement /// 0051156 // glucose 6-phosphate metabolic process // not recorded /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004340 // glucokinase activity // not recorded /// 0004396 // hexokinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008865 // fructokinase activity // not recorded /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0019158 // mannokinase activity // not recorded </td> <td> -80.28 </td> <td> 604.34 </td> <td> -1.54 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 209370_s_at </td> <td> 209370_s_at </td> <td> BE502377 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE502377 /FEA=EST /DB_XREF=gi:9704785 /DB_XREF=est:hy22g03.x1 /CLONE=IMAGE:3198100 /UG=Hs.167679 SH3-domain binding protein 2 /FL=gb:AB000462.1 gb:AF000936.1 </td> <td> BE502377 </td> <td> SH3-domain binding protein 2 </td> <td> SH3BP2 </td> <td> 6452 </td> <td> NM_001122681 /// NM_001145855 /// NM_001145856 /// NM_003023 /// XM_005247997 /// XM_005247998 /// XM_005247999 /// XM_005248000 /// XM_006713911 /// XM_006713912 /// XM_006713913 </td> <td> 0007165 // signal transduction // traceable author statement /// 0009967 // positive regulation of signal transduction // traceable author statement </td> <td>  </td> <td> 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation </td> <td> 27.40 </td> <td> 68.78 </td> <td> 1.54 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 37408_at </td> <td> 37408_at </td> <td> AB014609 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AB014609:Homo sapiens mRNA for KIAA0709 protein, complete cds /cds=(116,4555) /gb=AB014609 /gi=3327231 /ug=Hs.7835 /len=5641 </td> <td> AB014609 </td> <td> mannose receptor, C type 2 </td> <td> MRC2 </td> <td> 9902 </td> <td> NM_006039 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006897 // endocytosis // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from direct assay </td> <td> 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> -32.15 </td> <td> 155.05 </td> <td> -1.54 </td> <td> 0.16 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200982_s_at </td> <td> 200982_s_at </td> <td> NM_001155 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001155.2 /DEF=Homo sapiens annexin A6 (ANXA6), transcript variant 1, mRNA. /FEA=mRNA /GEN=ANXA6 /PROD=annexin VI isoform 1 /DB_XREF=gi:4809274 /UG=Hs.118796 annexin A6 /FL=gb:J03578.1 gb:D00510.1 gb:NM_001155.2 </td> <td> NM_001155 </td> <td> annexin A6 </td> <td> ANXA6 </td> <td> 309 </td> <td> NM_001155 /// NM_001193544 /// NM_004033 /// XM_005268432 </td> <td> 0006816 // calcium ion transport // inferred from electronic annotation /// 0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0034220 // ion transmembrane transport // inferred from mutant phenotype /// 0051260 // protein homooligomerization // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031902 // late endosome membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from mutant phenotype /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from mutant phenotype /// 0015276 // ligand-gated ion channel activity // inferred from mutant phenotype /// 0015485 // cholesterol binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from mutant phenotype /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> 116.05 </td> <td> 485.55 </td> <td> 1.54 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 207801_s_at </td> <td> 207801_s_at </td> <td> NM_014868 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014868.1 /DEF=Homo sapiens ring finger protein 10 (RNF10), mRNA. /FEA=mRNA /GEN=RNF10 /PROD=ring finger protein 10 /DB_XREF=gi:7662652 /UG=Hs.5094 ring finger protein 10 /FL=gb:D87451.1 gb:NM_014868.1 </td> <td> NM_014868 </td> <td> ring finger protein 10 </td> <td> RNF10 </td> <td> 9921 </td> <td> NM_014868 /// XM_005254013 /// XM_005254014 /// XM_006719717 /// XR_243026 /// XR_243027 /// XR_429123 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0010626 // negative regulation of Schwann cell proliferation // inferred from sequence or structural similarity /// 0031643 // positive regulation of myelination // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0051865 // protein autoubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 32.72 </td> <td> 206.74 </td> <td> 1.54 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 214150_x_at </td> <td> 214150_x_at </td> <td> BE043477 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE043477 /FEA=EST /DB_XREF=gi:8360530 /DB_XREF=est:hk39a01.y1 /CLONE=IMAGE:2999016 /UG=Hs.24322 ATPase, H+ transporting, lysosomal (vacuolar proton pump) 9kD </td> <td> BE043477 </td> <td> ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 </td> <td> ATP6V0E1 </td> <td> 8992 </td> <td> NM_003945 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0016049 // cell growth // inferred from genetic interaction /// 0033572 // transferrin transport // traceable author statement /// 0043200 // response to amino acid // inferred from electronic annotation /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042625 // ATPase activity, coupled to transmembrane movement of ions // inferred from sequence or structural similarity /// 0046961 // proton-transporting ATPase activity, rotational mechanism // traceable author statement </td> <td> 55.85 </td> <td> 719.10 </td> <td> 1.54 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 217140_s_at </td> <td> 217140_s_at </td> <td> AJ002428 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AJ002428 /DEF=Homo sapiens VDAC1 pseudogene /FEA=CDS /DB_XREF=gi:3183956 /UG=Hs.201553 voltage-dependent anion channel 1 pseudogene </td> <td> AJ002428 </td> <td> voltage-dependent anion channel 1 </td> <td> VDAC1 </td> <td> 7416 </td> <td> NM_003374 /// NR_036624 /// NR_036625 /// XM_005272075 </td> <td> 0001662 // behavioral fear response // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007270 // neuron-neuron synaptic transmission // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0046930 // pore complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008308 // voltage-gated anion channel activity // inferred from sequence or structural similarity /// 0008308 // voltage-gated anion channel activity // traceable author statement /// 0015288 // porin activity // inferred from electronic annotation </td> <td> -108.73 </td> <td> 467.84 </td> <td> -1.54 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 208627_s_at </td> <td> 208627_s_at </td> <td> BE966374 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE966374 /FEA=EST /DB_XREF=gi:11771720 /DB_XREF=est:601660422R1 /CLONE=IMAGE:3906197 /UG=Hs.74497 nuclease sensitive element binding protein 1 /FL=gb:BC002411.1 </td> <td> BE966374 </td> <td> Y box binding protein 1 </td> <td> YBX1 </td> <td> 4904 </td> <td> NM_004559 /// XM_005270904 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement /// 0051154 // negative regulation of striated muscle cell differentiation // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from sequence or structural similarity </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -258.92 </td> <td> 1672.19 </td> <td> -1.54 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 214355_x_at </td> <td> 214355_x_at </td> <td> AW274747 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW274747 /FEA=EST /DB_XREF=gi:6661777 /DB_XREF=est:xn34e08.x1 /CLONE=IMAGE:2695622 /UG=Hs.270527 Homo sapiens mRNA; cDNA DKFZp434F0327 (from clone DKFZp434F0327) </td> <td> AW274747 </td> <td> CTAGE family, member 15 /// CTAGE family, member 4 /// CTAGE family, member 8 /// CTAGE family, member 9 </td> <td> CTAGE15 /// CTAGE4 /// CTAGE8 /// CTAGE9 </td> <td> 441294 /// 643854 /// 100128553 /// 100142659 </td> <td> NM_001008747 /// NM_001145659 /// NM_001278507 /// NM_198495 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation </td> <td> -27.40 </td> <td> 87.97 </td> <td> -1.54 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 208971_at </td> <td> 208971_at </td> <td> M14016 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M14016.1 /DEF=Human uroporphyrinogen decarboxylase mRNA, complete cds. /FEA=mRNA /GEN=UROD /DB_XREF=gi:340180 /UG=Hs.78601 uroporphyrinogen decarboxylase /FL=gb:BC001778.1 gb:M14016.1 gb:AF104421.1 gb:AF104422.1 gb:AF104423.1 gb:AF104424.1 gb:AF104425.1 gb:AF104426.1 gb:AF104427.1 gb:AF104428.1 gb:AF104429.1 gb:AF104430.1 gb:AF104431.1 gb:AF104432.1 gb:AF104433.1 gb:AF104434.1 gb:AF104435.1 gb:AF104436.1 gb:AF104437.1 gb:AF104438.1 gb:AF104439.1 gb:AF104440.1 gb:NM_000374.2 </td> <td> M14016 </td> <td> uroporphyrinogen decarboxylase </td> <td> UROD </td> <td> 7389 </td> <td> NM_000374 /// NR_036510 /// XM_005271169 /// XM_005271170 </td> <td> 0006778 // porphyrin-containing compound metabolic process // traceable author statement /// 0006779 // porphyrin-containing compound biosynthetic process // inferred from electronic annotation /// 0006782 // protoporphyrinogen IX biosynthetic process // inferred from electronic annotation /// 0006783 // heme biosynthetic process // inferred by curator /// 0006783 // heme biosynthetic process // traceable author statement /// 0042168 // heme metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay </td> <td> 0004853 // uroporphyrinogen decarboxylase activity // inferred from direct assay /// 0004853 // uroporphyrinogen decarboxylase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation </td> <td> 23.60 </td> <td> 172.57 </td> <td> 1.54 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 564_at </td> <td> 564_at </td> <td> M69013 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> M69013 /FEATURE= /DEFINITION=HUMGTPBRPA Human guanine nucleotide-binding regulatory protein (G-y-alpha) mRNA, complete cds </td> <td> M69013 </td> <td> guanine nucleotide binding protein (G protein), alpha 11 (Gq class) </td> <td> GNA11 </td> <td> 2767 </td> <td> NM_002067 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001508 // action potential // not recorded /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // not recorded /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0045634 // regulation of melanocyte differentiation // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0060158 // phospholipase C-activating dopamine receptor signaling pathway // not recorded </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // not recorded /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // not recorded /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // not recorded /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031826 // type 2A serotonin receptor binding //  /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 29.17 </td> <td> 188.86 </td> <td> 1.54 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 207719_x_at </td> <td> 207719_x_at </td> <td> NM_014812 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014812.1 /DEF=Homo sapiens KIAA0470 gene product (KIAA0470), mRNA. /FEA=mRNA /GEN=KIAA0470 /PROD=KARP-1-binding protein /DB_XREF=gi:7662141 /UG=Hs.25132 KIAA0470 gene product /FL=gb:AB022657.1 gb:NM_014812.1 </td> <td> NM_014812 </td> <td> centrosomal protein 170kDa /// centrosomal protein 170kDa pseudogene 1 </td> <td> CEP170 /// CEP170P1 </td> <td> 9859 /// 645455 </td> <td> NM_001042404 /// NM_001042405 /// NM_014812 /// NM_153243 /// NR_003135 /// XM_005273361 /// XM_006711843 /// XM_006711844 /// XM_006711845 /// XM_006711846 /// XM_006711847 /// XM_006711848 /// XM_006711849 /// XM_006711850 /// XM_006711851 /// XM_006711852 /// XM_006724974 /// XM_006724975 /// XM_006724976 /// XM_006724977 /// XM_006724978 /// XM_006724979 /// XM_006724980 /// XM_006724981 /// XM_006724982 /// XM_006724983 /// XM_006724984 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 71.23 </td> <td> 527.29 </td> <td> 1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 632_at </td> <td> 632_at </td> <td> L40027 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> Affymetrix Proprietary Database </td> <td> L40027 /FEATURE=mRNA /DEFINITION=HUMGLYSYN Homo sapiens glycogen synthase kinase 3 mRNA, complete cds </td> <td> L40027 </td> <td> glycogen synthase kinase 3 alpha </td> <td> GSK3A </td> <td> 2931 </td> <td> NM_019884 </td> <td> 0003073 // regulation of systemic arterial blood pressure // inferred from sequence or structural similarity /// 0003214 // cardiac left ventricle morphogenesis // inferred from sequence or structural similarity /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0010905 // negative regulation of UDP-glucose catabolic process // inferred by curator /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from sequence or structural similarity /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032007 // negative regulation of TOR signaling // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0036016 // cellular response to interleukin-3 // inferred from sequence or structural similarity /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045719 // negative regulation of glycogen biosynthetic process // traceable author statement /// 0045732 // positive regulation of protein catabolic process // non-traceable author statement /// 0045823 // positive regulation of heart contraction // inferred from sequence or structural similarity /// 0046325 // negative regulation of glucose import // inferred from mutant phenotype /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from mutant phenotype /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0051348 // negative regulation of transferase activity // inferred from mutant phenotype /// 0061052 // negative regulation of cell growth involved in cardiac muscle cell development // inferred from sequence or structural similarity /// 0071879 // positive regulation of adrenergic receptor signaling pathway // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt signaling pathway // traceable author statement /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from sequence or structural similarity /// 1901030 // positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway // inferred from sequence or structural similarity /// 2000077 // negative regulation of type B pancreatic cell development // traceable author statement /// 2000466 // negative regulation of glycogen (starch) synthase activity // traceable author statement /// 2000467 // positive regulation of glycogen (starch) synthase activity // inferred from sequence or structural similarity </td> <td> 0005829 // cytosol // traceable author statement /// 0030877 // beta-catenin destruction complex // non-traceable author statement /// 0030877 // beta-catenin destruction complex // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0034236 // protein kinase A catalytic subunit binding // inferred from physical interaction /// 0050321 // tau-protein kinase activity // traceable author statement </td> <td> 24.65 </td> <td> 156.12 </td> <td> 1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 208629_s_at </td> <td> 208629_s_at </td> <td> BG472176 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG472176 /FEA=EST /DB_XREF=gi:13404550 /DB_XREF=est:602513910F1 /CLONE=IMAGE:4645587 /UG=Hs.75860 hydroxyacyl-Coenzyme A dehydrogenase3-ketoacyl-Coenzyme A thiolaseenoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit /FL=gb:NM_000182.1 gb:D16480.1 gb:U04627.1 </td> <td> BG472176 </td> <td> hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit </td> <td> HADHA </td> <td> 3030 </td> <td> NM_000182 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // traceable author statement /// 0006644 // phospholipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0035965 // cardiolipin acyl-chain remodeling // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016507 // mitochondrial fatty acid beta-oxidation multienzyme complex // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay </td> <td> 0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003857 // 3-hydroxyacyl-CoA dehydrogenase activity // traceable author statement /// 0003985 // acetyl-CoA C-acetyltransferase activity // traceable author statement /// 0003988 // acetyl-CoA C-acyltransferase activity // inferred from electronic annotation /// 0004300 // enoyl-CoA hydratase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016508 // long-chain-enoyl-CoA hydratase activity // inferred from electronic annotation /// 0016509 // long-chain-3-hydroxyacyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> -31.78 </td> <td> 271.99 </td> <td> -1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200596_s_at </td> <td> 200596_s_at </td> <td> BE614908 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE614908 /FEA=EST /DB_XREF=gi:9896507 /DB_XREF=est:601280348F1 /CLONE=IMAGE:3622499 /UG=Hs.198899 eukaryotic translation initiation factor 3, subunit 10 (theta, 150170kD) /FL=gb:D50929.1 gb:U58046.1 gb:U78311.1 gb:NM_003750.1 </td> <td> BE614908 </td> <td> eukaryotic translation initiation factor 3, subunit A </td> <td> EIF3A </td> <td> 8661 </td> <td> NM_003750 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0001732 // formation of translation initiation complex // inferred from direct assay /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation </td> <td> 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -40.50 </td> <td> 230.23 </td> <td> -1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201784_s_at </td> <td> 201784_s_at </td> <td> NM_014267 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014267.1 /DEF=Homo sapiens small acidic protein (IMAGE145052), mRNA. /FEA=mRNA /GEN=IMAGE145052 /PROD=small acidic protein /DB_XREF=gi:7657233 /UG=Hs.78050 small acidic protein /FL=gb:U51678.1 gb:NM_014267.1 </td> <td> NM_014267 </td> <td> chromosome 11 open reading frame 58 </td> <td> C11orf58 </td> <td> 10944 </td> <td> NM_001142705 /// NM_014267 </td> <td>  </td> <td>  </td> <td>  </td> <td> 114.65 </td> <td> 693.92 </td> <td> 1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 207391_s_at </td> <td> 207391_s_at </td> <td> NM_003557 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003557.1 /DEF=Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I, alpha (PIP5K1A), mRNA.  /FEA=mRNA /GEN=PIP5K1A /PROD=phosphatidylinositol-4-phosphate 5-kinase, typeI, alpha /DB_XREF=gi:4505814 /UG=Hs.149255 phosphatidylinositol-4-phosphate 5-kinase, type I, alpha /FL=gb:U78575.1 gb:NM_003557.1 </td> <td> NM_003557 </td> <td> phosphatidylinositol-4-phosphate 5-kinase, type I, alpha </td> <td> PIP5K1A </td> <td> 8394 </td> <td> NM_001135636 /// NM_001135637 /// NM_001135638 /// NM_003557 /// XM_005245525 /// XM_005245526 /// XM_005245527 /// XM_005245528 /// XM_005245529 /// XM_005245530 /// XM_005245531 /// XM_005245532 /// XM_006711563 /// XM_006711564 /// XM_006711565 /// XM_006711566 /// XM_006711567 /// XM_006711568 </td> <td> 0006644 // phospholipid metabolic process // traceable author statement /// 0006650 // glycerophospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006909 // phagocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from direct assay /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // non-traceable author statement /// 0016477 // cell migration // non-traceable author statement /// 0030216 // keratinocyte differentiation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0032863 // activation of Rac GTPase activity // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from direct assay /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // traceable author statement /// 0048041 // focal adhesion assembly // inferred from mutant phenotype /// 0060326 // cell chemotaxis // inferred from mutant phenotype /// 0072661 // protein targeting to plasma membrane // inferred from mutant phenotype /// 0097178 // ruffle assembly // inferred from mutant phenotype </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // traceable author statement /// 0030027 // lamellipodium // inferred from direct assay /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016307 // phosphatidylinositol phosphate kinase activity // inferred from electronic annotation /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from direct assay /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from direct assay </td> <td> -61.47 </td> <td> 204.26 </td> <td> -1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201989_s_at </td> <td> 201989_s_at </td> <td> AL529409 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL529409 /FEA=EST /DB_XREF=gi:12792902 /DB_XREF=est:AL529409 /CLONE=CS0DD006YM17 (3 prime) /UG=Hs.13313 cAMP responsive element binding protein-like 2 /FL=gb:AF039081.1 gb:NM_001310.1 </td> <td> AL529409 </td> <td> cAMP responsive element binding protein-like 2 </td> <td> CREBL2 </td> <td> 1389 </td> <td> NM_001310 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0045600 // positive regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0046326 // positive regulation of glucose import // inferred from sequence or structural similarity /// 0046889 // positive regulation of lipid biosynthetic process // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 35.12 </td> <td> 159.76 </td> <td> 1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 220760_x_at </td> <td> 220760_x_at </td> <td> NM_024733 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024733.1 /DEF=Homo sapiens hypothetical protein FLJ14345 (FLJ14345), mRNA. /FEA=mRNA /GEN=FLJ14345 /PROD=hypothetical protein FLJ14345 /DB_XREF=gi:13376051 /UG=Hs.117270 hypothetical protein FLJ14345 /FL=gb:NM_024733.1 </td> <td> NM_024733 </td> <td> zinc finger protein 665 </td> <td> ZNF665 </td> <td> 79788 </td> <td> NM_024733 /// XM_005259266 /// XM_006723387 /// XM_006723388 /// XM_006723389 /// XM_006723390 /// XM_006723391 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // not recorded </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -23.97 </td> <td> 129.21 </td> <td> -1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201841_s_at </td> <td> 201841_s_at </td> <td> NM_001540 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001540.2 /DEF=Homo sapiens heat shock 27kD protein 1 (HSPB1), mRNA. /FEA=mRNA /GEN=HSPB1 /PROD=heat shock 27kD protein 1 /DB_XREF=gi:4996892 /UG=Hs.76067 heat shock 27kD protein 1 /FL=gb:AB020027.1 gb:BC000510.1 gb:U90906.1 gb:NM_001540.2 </td> <td> NM_001540 </td> <td> heat shock 27kDa protein 1 </td> <td> HSPB1 </td> <td> 3315 </td> <td> NM_001540 </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0006446 // regulation of translational initiation // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006928 // cellular component movement // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0032731 // positive regulation of interleukin-1 beta production // inferred from sequence or structural similarity /// 0035556 // intracellular signal transduction // inferred from mutant phenotype /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0038033 // positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0042535 // positive regulation of tumor necrosis factor biosynthetic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043122 // regulation of I-kappaB kinase/NF-kappaB signaling // inferred from sequence or structural similarity /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from electronic annotation /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 1902176 // negative regulation of intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from sequence or structural similarity /// 2001028 // positive regulation of endothelial cell chemotaxis // inferred from mutant phenotype /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0043292 // contractile fiber // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008426 // protein kinase C inhibitor activity // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 156.90 </td> <td> 1622.15 </td> <td> 1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 212086_x_at </td> <td> 212086_x_at </td> <td> AK026584 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026584.1 /DEF=Homo sapiens cDNA: FLJ22931 fis, clone KAT07501, highly similar to HSLAMAR Human mRNA for nuclear envelope protein lamin A precursor.  /FEA=mRNA /DB_XREF=gi:10439468 /UG=Hs.77886 lamin AC </td> <td> AK026584 </td> <td> lamin A/C </td> <td> LMNA </td> <td> 4000 </td> <td> NM_001257374 /// NM_001282624 /// NM_001282625 /// NM_001282626 /// NM_005572 /// NM_170707 /// NM_170708 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006997 // nucleus organization // inferred from electronic annotation /// 0006998 // nuclear envelope organization // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0007084 // mitotic nuclear envelope reassembly // traceable author statement /// 0007517 // muscle organ development // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from sequence or structural similarity /// 0030951 // establishment or maintenance of microtubule cytoskeleton polarity // inferred from sequence or structural similarity /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0034504 // protein localization to nucleus // inferred from sequence or structural similarity /// 0035105 // sterol regulatory element binding protein import into nucleus // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from electronic annotation /// 0090343 // positive regulation of cell aging // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005638 // lamin filament // inferred from electronic annotation /// 0005638 // lamin filament // traceable author statement /// 0005652 // nuclear lamina // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005882 // intermediate filament // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 71.73 </td> <td> 258.01 </td> <td> 1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 220099_s_at </td> <td> 220099_s_at </td> <td> NM_016007 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016007.1 /DEF=Homo sapiens CGI-59 protein (LOC51625), mRNA. /FEA=mRNA /GEN=LOC51625 /PROD=CGI-59 protein /DB_XREF=gi:7706297 /UG=Hs.279867 CGI-59 protein /FL=gb:AF151817.1 gb:NM_016007.1 </td> <td> NM_016007 </td> <td> C7orf55-LUC7L2 readthrough /// LUC7-like 2 (S. cerevisiae) </td> <td> C7orf55-LUC7L2 /// LUC7L2 </td> <td> 51631 /// 100996928 </td> <td> NM_001244584 /// NM_001244585 /// NM_001270643 /// NM_016019 </td> <td> 0006376 // mRNA splice site selection // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005685 // U1 snRNP // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 25.60 </td> <td> 219.72 </td> <td> 1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 217225_x_at </td> <td> 217225_x_at </td> <td> AL512687 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL512687.1 /DEF=Homo sapiens mRNA; cDNA DKFZp547A1913 (from clone DKFZp547A1913). /FEA=mRNA /GEN=DKFZp547A1913 /PROD=hypothetical protein /DB_XREF=gi:12224839 /UG=Hs.227823 pM5 protein </td> <td> AL512687 </td> <td> uncharacterized LOC101060373 /// NODAL modulator 1 /// NODAL modulator 2 /// NODAL modulator 3 </td> <td> LOC101060373 /// NOMO1 /// NOMO2 /// NOMO3 </td> <td> 23420 /// 283820 /// 408050 /// 101060373 </td> <td> NM_001004060 /// NM_001004067 /// NM_014287 /// NM_173614 /// XM_005255318 /// XM_006725195 /// XR_253508 /// XR_430727 </td> <td>  </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> -216.70 </td> <td> 1100.03 </td> <td> -1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 210904_s_at </td> <td> 210904_s_at </td> <td> U81380 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U81380.2 /DEF=Human interleukin-13 receptor soluble form mRNA, complete cds. /FEA=mRNA /PROD=interleukin-13 receptor soluble form /DB_XREF=gi:5174767 /UG=Hs.285115 interleukin 13 receptor, alpha 1 /FL=gb:U81380.2 </td> <td> U81380 </td> <td> interleukin 13 receptor, alpha 1 </td> <td> IL13RA1 </td> <td> 3597 </td> <td> NM_001560 /// XM_005262411 </td> <td> 0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0035772 // interleukin-13-mediated signaling pathway // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005898 // interleukin-13 receptor complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016515 // interleukin-13 receptor activity // inferred from electronic annotation </td> <td> -29.43 </td> <td> 127.01 </td> <td> -1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201014_s_at </td> <td> 201014_s_at </td> <td> NM_006452 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006452.1 /DEF=Homo sapiens multifunctional polypeptide similar to SAICAR synthetase and AIR carboxylase (ADE2H1), mRNA.  /FEA=mRNA /GEN=ADE2H1 /PROD=multifunctional polypeptide similar to SAICARsynthetase and AIR carboxylase /DB_XREF=gi:5453538 /UG=Hs.117950 multifunctional polypeptide similar to SAICAR synthetase and AIR carboxylase /FL=gb:NM_006452.1 </td> <td> NM_006452 </td> <td> phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase </td> <td> PAICS </td> <td> 10606 </td> <td> NM_001079524 /// NM_001079525 /// NM_006452 /// XM_006714035 </td> <td> 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006189 // 'de novo' IMP biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009113 // purine nucleobase biosynthetic process // traceable author statement /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004638 // phosphoribosylaminoimidazole carboxylase activity // traceable author statement /// 0004639 // phosphoribosylaminoimidazolesuccinocarboxamide synthase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0034023 // 5-(carboxyamino)imidazole ribonucleotide mutase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 40.68 </td> <td> 262.21 </td> <td> 1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201260_s_at </td> <td> 201260_s_at </td> <td> NM_006754 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006754.1 /DEF=Homo sapiens synaptophysin-like protein (SYPL), mRNA. /FEA=mRNA /GEN=SYPL /PROD=synaptophysin-like protein /DB_XREF=gi:5803184 /UG=Hs.80919 synaptophysin-like protein /FL=gb:NM_006754.1 </td> <td> NM_006754 </td> <td> synaptophysin-like 1 </td> <td> SYPL1 </td> <td> 6856 </td> <td> NM_006754 /// NM_182715 /// XM_006716099 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement </td> <td> 0005887 // integral component of plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0030141 // secretory granule // inferred from electronic annotation /// 0030285 // integral component of synaptic vesicle membrane // not recorded /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from electronic annotation </td> <td> 48.47 </td> <td> 227.84 </td> <td> 1.53 </td> <td> 0.17 </td> <td> 0.23 </td> <td> -4.57 </td> </tr>
  <tr> <td> 221381_s_at </td> <td> 221381_s_at </td> <td> NM_006792 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006792.2 /DEF=Homo sapiens mortality factor 4 (MORF4), mRNA. /FEA=CDS /GEN=MORF4 /PROD=mortality factor 4 /DB_XREF=gi:6996927 /UG=Hs.251396 mortality factor 4 /FL=gb:NM_006792.2 </td> <td> NM_006792 </td> <td> mortality factor 4 like 1 </td> <td> MORF4L1 </td> <td> 10933 </td> <td> NM_001265603 /// NM_001265604 /// NM_001265605 /// NM_006791 /// NM_206839 </td> <td> 0000724 // double-strand break repair via homologous recombination // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0043968 // histone H2A acetylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016580 // Sin3 complex // inferred from direct assay /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> 39.80 </td> <td> 304.23 </td> <td> 1.52 </td> <td> 0.17 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 213807_x_at </td> <td> 213807_x_at </td> <td> BE870509 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE870509 /FEA=EST /DB_XREF=gi:10319285 /DB_XREF=est:601447096F1 /CLONE=IMAGE:3851374 /UG=Hs.285754 met proto-oncogene (hepatocyte growth factor receptor) </td> <td> BE870509 </td> <td> MET proto-oncogene, receptor tyrosine kinase </td> <td> MET </td> <td> 4233 </td> <td> NM_000245 /// NM_001127500 /// XM_006715988 /// XM_006715989 /// XM_006715990 /// XM_006715991 </td> <td> 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010828 // positive regulation of glucose transport // inferred from electronic annotation /// 0014812 // muscle cell migration // inferred from electronic annotation /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // non-traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0030534 // adult behavior // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from mutant phenotype /// 0050918 // positive chemotaxis // inferred from direct assay /// 0051450 // myoblast proliferation // inferred from electronic annotation /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // inferred from direct assay /// 1901299 // negative regulation of hydrogen peroxide-mediated programmed cell death // inferred from mutant phenotype /// 2001028 // positive regulation of endothelial cell chemotaxis // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005008 // hepatocyte growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction </td> <td> -24.55 </td> <td> 104.47 </td> <td> -1.52 </td> <td> 0.17 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 213504_at </td> <td> 213504_at </td> <td> W63732 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W63732 /FEA=EST /DB_XREF=gi:1371312 /DB_XREF=est:zd30b06.s1 /CLONE=IMAGE:342131 /UG=Hs.15591 COP9 subunit 6 (MOV34 homolog, 34 kD) </td> <td> W63732 </td> <td> COP9 signalosome subunit 6 </td> <td> COPS6 </td> <td> 10980 </td> <td> NM_006833 </td> <td> 0010388 // cullin deneddylation // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // COP9 signalosome // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 39.78 </td> <td> 183.69 </td> <td> 1.52 </td> <td> 0.17 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 208924_at </td> <td> 208924_at </td> <td> AB024703 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB024703.1 /DEF=Homo sapiens mRNA for Sid1669p, complete cds. /FEA=mRNA /GEN=Sid1669 /PROD=Sid1669p /DB_XREF=gi:5931544 /UG=Hs.96334 ring finger protein 11 /FL=gb:AF151881.1 gb:AB024703.1 gb:NM_014372.1 </td> <td> AB024703 </td> <td> ring finger protein 11 </td> <td> RNF11 </td> <td> 26994 </td> <td> NM_014372 </td> <td> 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0051865 // protein autoubiquitination // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // traceable author statement /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -61.22 </td> <td> 491.56 </td> <td> -1.52 </td> <td> 0.17 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200631_s_at </td> <td> 200631_s_at </td> <td> NM_003011 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003011.1 /DEF=Homo sapiens SET translocation (myeloid leukemia-associated) (SET), mRNA.  /FEA=mRNA /GEN=SET /PROD=SET translocation (myeloid leukemia-associated) /DB_XREF=gi:4506890 /UG=Hs.145279 SET translocation (myeloid leukemia-associated) /FL=gb:U51924.1 gb:M93651.1 gb:NM_003011.1 </td> <td> NM_003011 </td> <td> SET nuclear proto-oncogene /// SET-like protein </td> <td> SET /// SETSIP </td> <td> 6418 /// 646817 </td> <td> NM_001122821 /// NM_001248000 /// NM_001248001 /// NM_001287737 /// NM_003011 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006337 // nucleosome disassembly // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0035067 // negative regulation of histone acetylation // traceable author statement /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0045446 // endothelial cell differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050790 // regulation of catalytic activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004864 // protein phosphatase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0042393 // histone binding // traceable author statement </td> <td> 58.82 </td> <td> 729.51 </td> <td> 1.51 </td> <td> 0.17 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 216849_at </td> <td> 216849_at </td> <td> AL080233 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL080233.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586L111 (from clone DKFZp586L111). /FEA=mRNA /DB_XREF=gi:5262726 /UG=Hs.326580 Homo sapiens mRNA; cDNA DKFZp586L111 (from clone DKFZp586L111) </td> <td> AL080233 </td> <td>  </td> <td> AC007389.3 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -25.68 </td> <td> 48.61 </td> <td> -1.51 </td> <td> 0.17 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 207828_s_at </td> <td> 207828_s_at </td> <td> NM_005196 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005196.1 /DEF=Homo sapiens centromere protein F (350400kD, mitosin) (CENPF), mRNA.  /FEA=mRNA /GEN=CENPF /PROD=centromere protein F (350400kD, mitosin) /DB_XREF=gi:4885132 /UG=Hs.77204 centromere protein F (350400kD, mitosin) /FL=gb:NM_005196.1 gb:U19769.1 </td> <td> NM_005196 </td> <td> centromere protein F, 350/400kDa </td> <td> CENPF </td> <td> 1063 </td> <td> NM_016343 </td> <td> 0000085 // mitotic G2 phase // inferred from mutant phenotype /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000087 // mitotic M phase // inferred from direct assay /// 0000087 // mitotic M phase // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007059 // chromosome segregation // non-traceable author statement /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0010389 // regulation of G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0015031 // protein transport // inferred from direct assay /// 0015031 // protein transport // inferred from mutant phenotype /// 0016202 // regulation of striated muscle tissue development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0051310 // metaphase plate congression // inferred from direct assay /// 0051382 // kinetochore assembly // non-traceable author statement /// 0051726 // regulation of cell cycle // traceable author statement </td> <td> 0000775 // chromosome, centromeric region // inferred from direct assay /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000785 // chromatin // non-traceable author statement /// 0000922 // spindle pole // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0045120 // pronucleus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003682 // chromatin binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0045502 // dynein binding // inferred from direct assay </td> <td> -36.40 </td> <td> 182.30 </td> <td> -1.51 </td> <td> 0.17 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200057_s_at </td> <td> 200057_s_at </td> <td> NM_007363 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007363.2 /DEF=Homo sapiens non-POU-domain-containing, octamer-binding (NONO), mRNA.  /FEA=mRNA /GEN=NONO /PROD=non-Pou domain-containing octamer (ATGCAAAT)binding protein /DB_XREF=gi:7657382 /UG=Hs.172207 non-POU-domain-containing, octamer-binding /FL=gb:NM_007363.2 </td> <td> NM_007363 </td> <td> non-POU domain containing, octamer-binding </td> <td> NONO </td> <td> 4841 </td> <td> NM_001145408 /// NM_001145409 /// NM_001145410 /// NM_007363 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0008380 // RNA splicing // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0048511 // rhythmic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0042382 // paraspeckles // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001047 // core promoter binding // inferred from sequence or structural similarity /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -205.25 </td> <td> 1374.42 </td> <td> -1.51 </td> <td> 0.17 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 205196_s_at </td> <td> 205196_s_at </td> <td> NM_001283 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001283.1 /DEF=Homo sapiens adaptor-related protein complex 1, sigma 1 subunit (AP1S1), mRNA.  /FEA=mRNA /GEN=AP1S1 /PROD=adaptor-related protein complex 1, sigma 1subunit /DB_XREF=gi:4557470 /UG=Hs.57600 adaptor-related protein complex 1, sigma 1 subunit /FL=gb:AB015319.1 gb:NM_001283.1 </td> <td> NM_001283 </td> <td> adaptor-related protein complex 1, sigma 1 subunit </td> <td> AP1S1 </td> <td> 1174 </td> <td> NM_001283 /// NM_057089 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030121 // AP-1 adaptor complex // traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // non-traceable author statement /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> 35.95 </td> <td> 60.58 </td> <td> 1.51 </td> <td> 0.17 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202427_s_at </td> <td> 202427_s_at </td> <td> NM_015415 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015415.1 /DEF=Homo sapiens DKFZP564B167 protein (DKFZP564B167), mRNA. /FEA=mRNA /GEN=DKFZP564B167 /PROD=DKFZP564B167 protein /DB_XREF=gi:7661601 /UG=Hs.76285 DKFZP564B167 protein /FL=gb:AL110297.1 gb:NM_015415.1 </td> <td> NM_015415 </td> <td> mitochondrial pyruvate carrier 2 </td> <td> MPC2 </td> <td> 25874 </td> <td> NM_001143674 /// NM_015415 /// NR_026550 /// XM_006711266 </td> <td> 0006090 // pyruvate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006850 // mitochondrial pyruvate transport // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1901475 // pyruvate transmembrane transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0050833 // pyruvate transmembrane transporter activity // inferred from electronic annotation </td> <td> -32.27 </td> <td> 260.61 </td> <td> -1.51 </td> <td> 0.17 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 215978_x_at </td> <td> 215978_x_at </td> <td> AK021514 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK021514.1 /DEF=Homo sapiens cDNA FLJ11452 fis, clone HEMBA1001435. /FEA=mRNA /DB_XREF=gi:10432710 /UG=Hs.148598 Homo sapiens cDNA FLJ11452 fis, clone HEMBA1001435 </td> <td> AK021514 </td> <td> zinc finger protein 721 </td> <td> ZNF721 </td> <td> 170960 </td> <td> NM_133474 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 35.30 </td> <td> 131.10 </td> <td> 1.50 </td> <td> 0.17 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 215584_at </td> <td> 215584_at </td> <td> AK022679 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK022679.1 /DEF=Homo sapiens cDNA FLJ12617 fis, clone NT2RM4001662. /FEA=mRNA /DB_XREF=gi:10434213 /UG=Hs.287538 Homo sapiens cDNA FLJ12617 fis, clone NT2RM4001662 </td> <td> AK022679 </td> <td> HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 </td> <td> HECW1 </td> <td> 23072 </td> <td> NM_001287059 /// NM_015052 /// XM_005249665 /// XM_006715670 /// XM_006715671 /// XM_006715672 /// XM_006715673 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // not recorded /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -24.57 </td> <td> 77.66 </td> <td> -1.50 </td> <td> 0.17 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202432_at </td> <td> 202432_at </td> <td> NM_021132 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021132.1 /DEF=Homo sapiens protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta) (PPP3CB), mRNA.  /FEA=mRNA /GEN=PPP3CB /PROD=protein phosphatase 3 (formerly 2B), catalyticsubunit, beta isoform (calcineurin A beta) /DB_XREF=gi:11036639 /UG=Hs.151531 protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta) /FL=gb:NM_021132.1 gb:M29551.1 </td> <td> NM_021132 </td> <td> protein phosphatase 3, catalytic subunit, beta isozyme </td> <td> PPP3CB </td> <td> 5532 </td> <td> NM_001142353 /// NM_001142354 /// NM_001289968 /// NM_001289969 /// NM_021132 /// XM_005269944 /// XM_005269945 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0001915 // negative regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007612 // learning // traceable author statement /// 0007613 // memory // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0014883 // transition between fast and slow fiber // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // inferred from sequence or structural similarity /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0033173 // calcineurin-NFAT signaling cascade // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0035176 // social behavior // inferred from expression pattern /// 0035690 // cellular response to drug // inferred from direct assay /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042098 // T cell proliferation // non-traceable author statement /// 0042110 // T cell activation // traceable author statement /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // traceable author statement /// 0048675 // axon extension // traceable author statement /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from sequence or structural similarity /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005955 // calcineurin complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // non-traceable author statement /// 0004723 // calcium-dependent protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // non-traceable author statement /// 0008144 // drug binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from direct assay /// 0030346 // protein phosphatase 2B binding // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from sequence or structural similarity /// 0033192 // calmodulin-dependent protein phosphatase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from physical interaction </td> <td> -38.80 </td> <td> 215.53 </td> <td> -1.50 </td> <td> 0.17 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201655_s_at </td> <td> 201655_s_at </td> <td> M85289 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M85289.1 /DEF=Human heparan sulfate proteoglycan (HSPG2) mRNA, complete cds. /FEA=mRNA /GEN=HSPG2 /PROD=heparan sulfate proteoglycan /DB_XREF=gi:184426 /UG=Hs.211573 heparan sulfate proteoglycan 2 (perlecan) /FL=gb:M85289.1 gb:NM_005529.2 </td> <td> M85289 </td> <td> heparan sulfate proteoglycan 2 </td> <td> HSPG2 </td> <td> 3339 </td> <td> NM_001291860 /// NM_005529 /// XM_005245863 /// XM_006710594 /// XM_006710595 /// XM_006710596 /// XM_006710597 /// XM_006710598 </td> <td> 0001523 // retinoid metabolic process // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006027 // glycosaminoglycan catabolic process // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007603 // phototransduction, visible light // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048738 // cardiac muscle tissue development // inferred from electronic annotation /// 0060351 // cartilage development involved in endochondral bone morphogenesis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005605 // basal lamina // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -207.02 </td> <td> 1740.91 </td> <td> -1.50 </td> <td> 0.18 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201812_s_at </td> <td> 201812_s_at </td> <td> NM_019059 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019059.1 /DEF=Homo sapiens 6.2 kd protein (LOC54543), mRNA. /FEA=mRNA /GEN=LOC54543 /PROD=6.2 kd protein /DB_XREF=gi:9506858 /UG=Hs.112318 6.2 kd protein /FL=gb:BC001732.1 gb:AF150733.1 gb:NM_019059.1 </td> <td> NM_019059 </td> <td> chromosome 4 open reading frame 46 /// translocase of outer mitochondrial membrane 7 homolog (yeast) </td> <td> C4orf46 /// TOMM7 </td> <td> 54543 /// 201725 </td> <td> NM_001008393 /// NM_019059 /// NR_077234 /// NR_077235 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030150 // protein import into mitochondrial matrix // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008320 // protein transmembrane transporter activity // traceable author statement </td> <td> 130.88 </td> <td> 1024.59 </td> <td> 1.50 </td> <td> 0.18 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201483_s_at </td> <td> 201483_s_at </td> <td> BC002802 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002802.1 /DEF=Homo sapiens, suppressor of Ty (S.cerevisiae) 4 homolog 1, clone MGC:3864, mRNA, complete cds.  /FEA=mRNA /PROD=suppressor of Ty (S.cerevisiae) 4 homolog 1 /DB_XREF=gi:12803910 /UG=Hs.79058 suppressor of Ty (S.cerevisiae) 4 homolog 1 /FL=gb:BC002802.1 gb:U43923.1 gb:U38818.1 gb:U38817.1 gb:NM_003168.1 </td> <td> BC002802 </td> <td> suppressor of Ty 4 homolog 1 (S. cerevisiae) </td> <td> SUPT4H1 </td> <td> 6827 </td> <td> NM_003168 /// NR_073470 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // inferred from direct assay /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0032785 // negative regulation of DNA-templated transcription, elongation // inferred from direct assay /// 0032786 // positive regulation of DNA-templated transcription, elongation // inferred from direct assay /// 0034244 // negative regulation of transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0032044 // DSIF complex // inferred from direct assay </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> -19.23 </td> <td> 171.76 </td> <td> -1.50 </td> <td> 0.18 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 208992_s_at </td> <td> 208992_s_at </td> <td> BC000627 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000627.1 /DEF=Homo sapiens, Signal transducer and activator of transcription 3, clone MGC:1607, mRNA, complete cds.  /FEA=mRNA /PROD=Signal transducer and activator of transcription3 /DB_XREF=gi:12653684 /UG=Hs.321677 signal transducer and activator of transcription 3 (acute-phase response factor) /FL=gb:BC000627.1 gb:NM_003150.1 gb:L29277.1 </td> <td> BC000627 </td> <td> signal transducer and activator of transcription 3 (acute-phase response factor) </td> <td> STAT3 </td> <td> 6774 </td> <td> NM_003150 /// NM_139276 /// NM_213662 /// XM_005257616 /// XM_005257617 /// XM_005257618 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001659 // temperature homeostasis // inferred from sequence or structural similarity /// 0001754 // eye photoreceptor cell differentiation // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006953 // acute-phase response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007259 // JAK-STAT cascade // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // non-traceable author statement /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0019953 // sexual reproduction // inferred from sequence or structural similarity /// 0030522 // intracellular receptor signaling pathway // inferred from direct assay /// 0032355 // response to estradiol // inferred from direct assay /// 0032870 // cellular response to hormone stimulus // inferred from direct assay /// 0034097 // response to cytokine // inferred from electronic annotation /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042755 // eating behavior // inferred from sequence or structural similarity /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048708 // astrocyte differentiation // inferred from sequence or structural similarity /// 0060019 // radial glial cell differentiation // inferred from sequence or structural similarity /// 0060396 // growth hormone receptor signaling pathway // inferred from direct assay /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // inferred from direct assay /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // inferred from sequence or structural similarity /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0070102 // interleukin-6-mediated signaling pathway // inferred from direct assay /// 2001223 // negative regulation of neuron migration // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0031730 // CCR5 chemokine receptor binding // inferred from electronic annotation /// 0035259 // glucocorticoid receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046983 // protein dimerization activity // inferred from sequence or structural similarity </td> <td> 30.33 </td> <td> 154.04 </td> <td> 1.49 </td> <td> 0.18 </td> <td> 0.24 </td> <td> -4.57 </td> </tr>
  <tr> <td> 205292_s_at </td> <td> 205292_s_at </td> <td> NM_002137 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002137.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein A2B1 (HNRPA2B1), mRNA.  /FEA=mRNA /GEN=HNRPA2B1 /PROD=heterogeneous nuclear ribonucleoprotein A2B1 /DB_XREF=gi:4504446 /UG=Hs.75598 heterogeneous nuclear ribonucleoprotein A2B1 /FL=gb:NM_002137.1 </td> <td> NM_002137 </td> <td> heterogeneous nuclear ribonucleoprotein A2/B1 </td> <td> HNRNPA2B1 </td> <td> 3181 </td> <td> NM_002137 /// NM_031243 /// XM_005249729 /// XM_006715714 /// XR_242076 /// XR_242077 /// XR_428077 /// XR_428078 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from direct assay /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from electronic annotation /// 0050658 // RNA transport // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0043047 // single-stranded telomeric DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0097157 // pre-mRNA intronic binding // inferred from electronic annotation </td> <td> 137.12 </td> <td> 1117.74 </td> <td> 1.49 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201756_at </td> <td> 201756_at </td> <td> NM_002946 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002946.1 /DEF=Homo sapiens replication protein A2 (32kD) (RPA2), mRNA. /FEA=mRNA /GEN=RPA2 /PROD=replication protein A2 (32kD) /DB_XREF=gi:4506584 /UG=Hs.79411 replication protein A2 (32kD) /FL=gb:BC001630.1 gb:J05249.1 gb:NM_002946.1 </td> <td> NM_002946 </td> <td> replication protein A2, 32kDa </td> <td> RPA2 </td> <td> 6118 </td> <td> NM_001286076 /// NM_002946 /// XM_005245965 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // inferred from mutant phenotype /// 0000723 // telomere maintenance // traceable author statement /// 0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0000730 // DNA recombinase assembly // traceable author statement /// 0006260 // DNA replication // inferred from direct assay /// 0006260 // DNA replication // inferred from mutant phenotype /// 0006260 // DNA replication // traceable author statement /// 0006261 // DNA-dependent DNA replication // traceable author statement /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006284 // base-excision repair // inferred from direct assay /// 0006289 // nucleotide-excision repair // inferred from mutant phenotype /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006298 // mismatch repair // inferred from mutant phenotype /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0010569 // regulation of double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0031571 // mitotic G1 DNA damage checkpoint // inferred from mutant phenotype /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 2000001 // regulation of DNA damage checkpoint // inferred from mutant phenotype </td> <td> 0000781 // chromosome, telomeric region // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005662 // DNA replication factor A complex // inferred from direct assay /// 0005662 // DNA replication factor A complex // inferred from physical interaction /// 0005730 // nucleolus // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0035861 // site of double-strand break // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred by curator /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from electronic annotation </td> <td> 56.40 </td> <td> 256.25 </td> <td> 1.49 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 217774_s_at </td> <td> 217774_s_at </td> <td> NM_016404 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016404.1 /DEF=Homo sapiens hypothetical protein (HSPC152), mRNA. /FEA=mRNA /GEN=HSPC152 /PROD=hypothetical protein /DB_XREF=gi:7705476 /UG=Hs.79259 hypothetical protein /FL=gb:AF110774.1 gb:AF161501.1 gb:NM_016404.1 gb:AF229068.1 </td> <td> NM_016404 </td> <td> tRNA methyltransferase 11-2 homolog (S. cerevisiae) </td> <td> TRMT112 </td> <td> 51504 </td> <td> NM_001286082 /// NM_001286084 /// NM_016404 </td> <td> 0018364 // peptidyl-glutamine methylation // inferred from direct assay </td> <td> 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008276 // protein methyltransferase activity // inferred from direct assay </td> <td> 36.47 </td> <td> 494.69 </td> <td> 1.49 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202292_x_at </td> <td> 202292_x_at </td> <td> NM_007260 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007260.1 /DEF=Homo sapiens lysophospholipase II (LYPLA2), mRNA. /FEA=mRNA /GEN=LYPLA2 /PROD=lysophospholipase II /DB_XREF=gi:9966763 /UG=Hs.283655 lysophospholipase II /FL=gb:AF098668.1 gb:NM_007260.1 </td> <td> NM_007260 </td> <td> lysophospholipase II </td> <td> LYPLA2 </td> <td> 11313 </td> <td> NM_007260 /// XM_005245728 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 42.40 </td> <td> 363.27 </td> <td> 1.49 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 207320_x_at </td> <td> 207320_x_at </td> <td> NM_004602 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004602.1 /DEF=Homo sapiens staufen (Drosophila, RNA-binding protein) (STAU), transcript variant T4, mRNA.  /FEA=mRNA /GEN=STAU /PROD=staufen, isoform a /DB_XREF=gi:4759175 /UG=Hs.6113 staufen (Drosophila, RNA-binding protein) /FL=gb:AF061941.1 gb:NM_004602.1 </td> <td> NM_004602 </td> <td> staufen double-stranded RNA binding protein 1 </td> <td> STAU1 </td> <td> 6780 </td> <td> NM_001037328 /// NM_004602 /// NM_017452 /// NM_017453 /// NM_017454 /// XM_005260524 /// XM_005260525 /// XM_005260526 /// XM_005260527 /// XM_005260528 /// XM_005260529 /// XM_006723865 /// XM_006723866 /// XM_006723867 /// XM_006723868 /// XM_006723869 </td> <td> 0008298 // intracellular mRNA localization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044297 // cell body // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008157 // protein phosphatase 1 binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 87.78 </td> <td> 707.94 </td> <td> 1.49 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201508_at </td> <td> 201508_at </td> <td> NM_001552 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001552.1 /DEF=Homo sapiens insulin-like growth factor-binding protein 4 (IGFBP4), mRNA.  /FEA=mRNA /GEN=IGFBP4 /PROD=insulin-like growth factor-binding protein 4 /DB_XREF=gi:10835020 /UG=Hs.1516 insulin-like growth factor-binding protein 4 /FL=gb:NM_001552.1 gb:M62403.1 </td> <td> NM_001552 </td> <td> insulin-like growth factor binding protein 4 </td> <td> IGFBP4 </td> <td> 3487 </td> <td> NM_001552 </td> <td> 0001501 // skeletal system development // traceable author statement /// 0001558 // regulation of cell growth // inferred from electronic annotation /// 0006259 // DNA metabolic process // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0010906 // regulation of glucose metabolic process // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043568 // positive regulation of insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044342 // type B pancreatic cell proliferation // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation </td> <td> 121.18 </td> <td> 664.64 </td> <td> 1.49 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200042_at </td> <td> 200042_at </td> <td> NM_014306 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014306.1 /DEF=Homo sapiens hypothetical protein (HSPC117), mRNA. /FEA=mRNA /GEN=HSPC117 /PROD=similar to C. elegens hypothetical 55.2 kDprotein F16A11.2 /DB_XREF=gi:7657014 /UG=Hs.10729 hypothetical protein /FL=gb:BC000151.1 gb:BC002970.1 gb:AF161466.1 gb:NM_014306.1 gb:AF155658.1 </td> <td> NM_014306 </td> <td> RNA 2',3'-cyclic phosphate and 5'-OH ligase </td> <td> RTCB </td> <td> 51493 </td> <td> NM_014306 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0006388 // tRNA splicing, via endonucleolytic cleavage and ligation // inferred from direct assay /// 0006396 // RNA processing // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // non-traceable author statement /// 0008033 // tRNA processing // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // non-traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0072669 // tRNA-splicing ligase complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003972 // RNA ligase (ATP) activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008452 // RNA ligase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 48.02 </td> <td> 317.61 </td> <td> 1.49 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201173_x_at </td> <td> 201173_x_at </td> <td> NM_006600 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006600.1 /DEF=Homo sapiens nuclear distribution gene C (A.nidulans) homolog (NUDC), mRNA.  /FEA=mRNA /GEN=NUDC /PROD=nuclear distribution gene C (A.nidulans)homolog /DB_XREF=gi:5729952 /UG=Hs.263812 nuclear distribution gene C (A.nidulans) homolog /FL=gb:BC002399.1 gb:BC003132.1 gb:AB019408.1 gb:AF130736.1 gb:AF125465.1 gb:AF100760.1 gb:NM_006600.1 </td> <td> NM_006600 </td> <td> nudC nuclear distribution protein </td> <td> NUDC </td> <td> 10726 </td> <td> NM_006600 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 36.53 </td> <td> 346.41 </td> <td> 1.49 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200636_s_at </td> <td> 200636_s_at </td> <td> NM_002840 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002840.1 /DEF=Homo sapiens protein tyrosine phosphatase, receptor type, F (PTPRF), mRNA.  /FEA=mRNA /GEN=PTPRF /PROD=protein tyrosine phosphatase, receptor type, fpolypeptide /DB_XREF=gi:4506310 /UG=Hs.75216 protein tyrosine phosphatase, receptor type, F /FL=gb:NM_002840.1 </td> <td> NM_002840 </td> <td> protein tyrosine phosphatase, receptor type, F </td> <td> PTPRF </td> <td> 5792 </td> <td> NM_002840 /// NM_130440 /// XM_005271079 /// XM_005271080 /// XM_005271081 /// XM_005271082 /// XM_006710795 /// XM_006710796 /// XM_006710797 /// XM_006710798 /// XM_006710799 /// XM_006710800 /// XM_006710801 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from mutant phenotype /// 1900121 // negative regulation of receptor binding // inferred from mutant phenotype </td> <td> 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from mutant phenotype /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> 50.73 </td> <td> 454.89 </td> <td> 1.49 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201711_x_at </td> <td> 201711_x_at </td> <td> AI681120 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI681120 /FEA=EST /DB_XREF=gi:4891302 /DB_XREF=est:tx44b06.x1 /CLONE=IMAGE:2272403 /UG=Hs.199179 RAN binding protein 2 /FL=gb:NM_006267.2 gb:D42063.1 </td> <td> AI681120 </td> <td> RAN binding protein 2 </td> <td> RANBP2 </td> <td> 5903 </td> <td> NM_006267 /// XM_005264002 /// XM_005264003 /// XM_005264004 /// XM_005264005 /// XM_005264006 /// XM_005264007 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006606 // protein import into nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0033132 // negative regulation of glucokinase activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046907 // intracellular transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0090526 // regulation of gluconeogenesis involved in cellular glucose homeostasis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0042405 // nuclear inclusion body // inferred from direct assay /// 0044615 // nuclear pore nuclear basket // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008536 // Ran GTPase binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -42.78 </td> <td> 278.41 </td> <td> -1.49 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200700_s_at </td> <td> 200700_s_at </td> <td> NM_006854 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006854.2 /DEF=Homo sapiens KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 (KDELR2), mRNA.  /FEA=mRNA /GEN=KDELR2 /PROD=KDEL receptor 2 /DB_XREF=gi:8051609 /UG=Hs.118778 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 /FL=gb:NM_006854.2 </td> <td> NM_006854 </td> <td> KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 </td> <td> KDELR2 </td> <td> 11014 </td> <td> NM_001100603 /// NM_006854 </td> <td> 0006621 // protein retention in ER lumen // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005801 // cis-Golgi network // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005046 // KDEL sequence binding // traceable author statement /// 0046923 // ER retention sequence binding // inferred from electronic annotation </td> <td> 61.80 </td> <td> 832.25 </td> <td> 1.48 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 213022_s_at </td> <td> 213022_s_at </td> <td> NM_007124 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_007124.1 /DEF=Homo sapiens utrophin (homologous to dystrophin) (UTRN), mRNA. /FEA=CDS /GEN=UTRN /PROD=utrophin /DB_XREF=gi:6005937 /UG=Hs.251967 utrophin (homologous to dystrophin) /FL=gb:NM_007124.1 </td> <td> NM_007124 </td> <td> utrophin </td> <td> UTRN </td> <td> 7402 </td> <td> NM_007124 /// XM_005267127 /// XM_005267128 /// XM_005267130 /// XM_005267132 /// XM_005267133 /// XM_006715559 /// XM_006715560 </td> <td> 0001954 // positive regulation of cell-matrix adhesion // inferred from mutant phenotype /// 0006936 // muscle contraction // traceable author statement /// 0007517 // muscle organ development // traceable author statement /// 2000649 // regulation of sodium ion transmembrane transporter activity // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016010 // dystrophin-associated glycoprotein complex // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0031527 // filopodium membrane // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070938 // contractile ring // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -41.67 </td> <td> 179.16 </td> <td> -1.48 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202290_at </td> <td> 202290_at </td> <td> NM_014891 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014891.1 /DEF=Homo sapiens PDGF associated protein (HASPP28), mRNA. /FEA=mRNA /GEN=HASPP28 /PROD=PDGF associated protein /DB_XREF=gi:7657440 /UG=Hs.278426 PDGFA associated protein 1 /FL=gb:U41745.1 gb:BC000684.1 gb:NM_014891.1 </td> <td> NM_014891 </td> <td> PDGFA associated protein 1 </td> <td> PDAP1 </td> <td> 11333 </td> <td> NM_014891 </td> <td> 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement </td> <td>  </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -55.20 </td> <td> 200.45 </td> <td> -1.48 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 210990_s_at </td> <td> 210990_s_at </td> <td> U77706 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U77706.1 /DEF=Human laminin alpha 4 chain (LAMA4*-1) mRNA, complete cds. /FEA=mRNA /GEN=LAMA4*-1 /PROD=laminin alpha 4 chain /DB_XREF=gi:1684836 /UG=Hs.78672 laminin, alpha 4 /FL=gb:U77706.1 </td> <td> U77706 </td> <td> laminin, alpha 4 </td> <td> LAMA4 </td> <td> 3910 </td> <td> NM_001105206 /// NM_001105207 /// NM_001105208 /// NM_001105209 /// NM_002290 /// XM_005266983 /// XM_005266984 /// XM_006715480 /// XM_006715481 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007172 // signal complex assembly // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0045995 // regulation of embryonic development // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005605 // basal lamina // traceable author statement /// 0005606 // laminin-1 complex // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -41.33 </td> <td> 141.01 </td> <td> -1.48 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 209903_s_at </td> <td> 209903_s_at </td> <td> U49844 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U49844.1 /DEF=Human FRAP-related protein (FRP1) mRNA, complete cds. /FEA=mRNA /GEN=FRP1 /PROD=FRAP-related protein /DB_XREF=gi:1235901 /UG=Hs.77613 ataxia telangiectasia and Rad3 related /FL=gb:U49844.1 gb:U76308.1 gb:NM_001184.1 </td> <td> U49844 </td> <td> ATR serine/threonine kinase </td> <td> ATR </td> <td> 545 </td> <td> NM_001184 /// XR_241498 </td> <td> 0000077 // DNA damage checkpoint // inferred from direct assay /// 0006260 // DNA replication // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // traceable author statement /// 0007049 // cell cycle // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0034644 // cellular response to UV // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0043517 // positive regulation of DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0071480 // cellular response to gamma radiation // inferred from direct assay /// 0090399 // replicative senescence // inferred from mutant phenotype </td> <td> 0001741 // XY body // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from sequence or structural similarity /// 0016605 // PML body // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0032405 // MutLalpha complex binding // inferred from direct assay /// 0032407 // MutSalpha complex binding // inferred from direct assay </td> <td> 23.80 </td> <td> 92.97 </td> <td> 1.48 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 205975_s_at </td> <td> 205975_s_at </td> <td> NM_024501 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024501.1 /DEF=Homo sapiens homeo box D1 (HOXD1), mRNA. /FEA=mRNA /GEN=HOXD1 /PROD=homeo box D1 /DB_XREF=gi:13375631 /UG=Hs.83465 homeo box D1 /FL=gb:AF241528.1 gb:NM_024501.1 </td> <td> NM_024501 </td> <td> homeobox D1 </td> <td> HOXD1 </td> <td> 3231 </td> <td> NM_024501 /// XM_005246507 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -23.53 </td> <td> 104.89 </td> <td> -1.48 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 203560_at </td> <td> 203560_at </td> <td> NM_003878 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003878.1 /DEF=Homo sapiens gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) (GGH), mRNA.  /FEA=mRNA /GEN=GGH /PROD=gamma-glutamyl hydrolase (conjugase,folylpolygammaglutamyl hydrolase) precursor /DB_XREF=gi:4503986 /UG=Hs.78619 gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) /FL=gb:U55206.1 gb:NM_003878.1 </td> <td> NM_003878 </td> <td> gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) </td> <td> GGH </td> <td> 8836 </td> <td> NM_003878 </td> <td> 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0008238 // exopeptidase activity // traceable author statement /// 0008242 // omega peptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0034722 // gamma-glutamyl-peptidase activity // inferred from direct assay </td> <td> -32.85 </td> <td> 266.60 </td> <td> -1.48 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 203916_at </td> <td> 203916_at </td> <td> NM_003635 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003635.1 /DEF=Homo sapiens N-deacetylaseN-sulfotransferase (heparan glucosaminyl) 2 (NDST2), mRNA.  /FEA=mRNA /GEN=NDST2 /PROD=N-deacetylaseN-sulfotransferase (heparanglucosaminyl) 2 /DB_XREF=gi:4505352 /UG=Hs.78473 N-deacetylaseN-sulfotransferase (heparan glucosaminyl) 2 /FL=gb:U36601.1 gb:NM_003635.1 </td> <td> NM_003635 </td> <td> N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 </td> <td> NDST2 </td> <td> 8509 </td> <td> NM_003635 /// XM_005270255 /// XM_005270256 /// XM_006718046 </td> <td> 0002002 // regulation of angiotensin levels in blood // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030210 // heparin biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0015016 // [heparan sulfate]-glucosamine N-sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019213 // deacetylase activity // inferred from electronic annotation </td> <td> 18.92 </td> <td> 69.46 </td> <td> 1.47 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 218250_s_at </td> <td> 218250_s_at </td> <td> NM_013354 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013354.2 /DEF=Homo sapiens CCR4-NOT transcription complex, subunit 7 (CNOT7), mRNA.  /FEA=mRNA /GEN=CNOT7 /PROD=CCR4-NOT transcription complex, subunit 7 /DB_XREF=gi:10518495 /UG=Hs.226318 CCR4-NOT transcription complex, subunit 7 /FL=gb:NM_013354.2 gb:L46722.1 </td> <td> NM_013354 </td> <td> CCR4-NOT transcription complex, subunit 7 </td> <td> CNOT7 </td> <td> 29883 </td> <td> NM_013354 /// NM_054026 /// XM_005273481 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0000290 // deadenylation-dependent decapping of nuclear-transcribed mRNA // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031047 // gene silencing by RNA // inferred from sequence or structural similarity /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from electronic annotation /// 0035195 // gene silencing by miRNA // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060213 // positive regulation of nuclear-transcribed mRNA poly(A) tail shortening // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090503 // RNA phosphodiester bond hydrolysis, exonucleolytic // inferred from direct assay /// 0090503 // RNA phosphodiester bond hydrolysis, exonucleolytic // inferred from electronic annotation /// 1900153 // positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // inferred from mutant phenotype </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030014 // CCR4-NOT complex // inferred from direct assay /// 0030014 // CCR4-NOT complex // non-traceable author statement </td> <td> 0000175 // 3'-5'-exoribonuclease activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004532 // exoribonuclease activity // inferred from direct assay /// 0004535 // poly(A)-specific ribonuclease activity // inferred from direct assay /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -35.85 </td> <td> 505.95 </td> <td> -1.47 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202336_s_at </td> <td> 202336_s_at </td> <td> NM_000919 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000919.1 /DEF=Homo sapiens peptidylglycine alpha-amidating monooxygenase (PAM), mRNA.  /FEA=mRNA /GEN=PAM /PROD=peptidylglycine alpha-amidating monooxygenase /DB_XREF=gi:4505602 /UG=Hs.83920 peptidylglycine alpha-amidating monooxygenase /FL=gb:M37721.1 gb:NM_000919.1 </td> <td> NM_000919 </td> <td> peptidylglycine alpha-amidating monooxygenase </td> <td> PAM </td> <td> 5066 </td> <td> NM_000919 /// NM_001177306 /// NM_138766 /// NM_138821 /// NM_138822 /// NR_033440 /// XM_006714632 /// XM_006714633 /// XM_006714634 /// XM_006714635 /// XM_006714636 /// XM_006714637 /// XM_006714638 /// XM_006714639 /// XM_006714640 </td> <td> 0001519 // peptide amidation // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001676 // long-chain fatty acid metabolic process // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006518 // peptide metabolic process // inferred from electronic annotation /// 0006518 // peptide metabolic process // non-traceable author statement /// 0007076 // mitotic chromosome condensation // inferred from mutant phenotype /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009268 // response to pH // inferred from electronic annotation /// 0009404 // toxin metabolic process // inferred from electronic annotation /// 0018032 // protein amidation // inferred from electronic annotation /// 0019538 // protein metabolic process // inferred from electronic annotation /// 0022602 // ovulation cycle process // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0050708 // regulation of protein secretion // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0000793 // condensed chromosome // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030141 // secretory granule // non-traceable author statement /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0004504 // peptidylglycine monooxygenase activity // inferred from direct assay /// 0004598 // peptidylamidoglycolate lyase activity // inferred from direct assay /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016715 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -37.33 </td> <td> 467.69 </td> <td> -1.47 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202705_at </td> <td> 202705_at </td> <td> NM_004701 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004701.2 /DEF=Homo sapiens cyclin B2 (CCNB2), mRNA. /FEA=mRNA /GEN=CCNB2 /PROD=cyclin B2 /DB_XREF=gi:10938017 /UG=Hs.194698 cyclin B2 /FL=gb:NM_004701.2 gb:AF002822.1 gb:AB020981.1 gb:AL080146.1 </td> <td> NM_004701 </td> <td> cyclin B2 </td> <td> CCNB2 </td> <td> 9133 </td> <td> NM_004701 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0040007 // growth // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation </td> <td> 33.73 </td> <td> 247.94 </td> <td> 1.47 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 201464_x_at </td> <td> 201464_x_at </td> <td> BG491844 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG491844 /FEA=EST /DB_XREF=gi:13453356 /DB_XREF=est:602535931T1 /CLONE=IMAGE:4684998 /UG=Hs.78465 v-jun avian sarcoma virus 17 oncogene homolog /FL=gb:BC002646.1 gb:NM_002228.2 </td> <td> BG491844 </td> <td> jun proto-oncogene </td> <td> JUN </td> <td> 3725 </td> <td> NM_002228 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001774 // microglial cell activation // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007184 // SMAD protein import into nucleus // inferred from direct assay /// 0007568 // aging // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0031953 // negative regulation of protein autophosphorylation // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035026 // leading edge cell differentiation // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043922 // negative regulation by host of viral transcription // inferred from direct assay /// 0043923 // positive regulation by host of viral transcription // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045657 // positive regulation of monocyte differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051365 // cellular response to potassium ion starvation // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from electronic annotation </td> <td> 0000228 // nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from electronic annotation </td> <td> 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred by curator /// 0003677 // DNA binding // traceable author statement /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070412 // R-SMAD binding // inferred from physical interaction /// 0071837 // HMG box domain binding // inferred from electronic annotation </td> <td> -174.08 </td> <td> 694.61 </td> <td> -1.47 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 218118_s_at </td> <td> 218118_s_at </td> <td> NM_006327 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006327.1 /DEF=Homo sapiens translocase of inner mitochondrial membrane 23 (yeast) homolog (TIM23), mRNA.  /FEA=mRNA /GEN=TIM23 /PROD=translocase of inner mitochondrial membrane 23(yeast) homolog /DB_XREF=gi:5454121 /UG=Hs.283684 translocase of inner mitochondrial membrane 23 (yeast) homolog /FL=gb:AF030162.1 gb:NM_006327.1 </td> <td> NM_006327 </td> <td> translocase of inner mitochondrial membrane 23 homolog (yeast) /// translocase of inner mitochondrial membrane 23 homolog B (yeast) </td> <td> TIMM23 /// TIMM23B </td> <td> 100287932 /// 100652748 </td> <td> NM_001290117 /// NM_001290118 /// NM_006327 /// NR_073029 /// NR_073030 /// NR_110767 /// XM_005278340 /// XM_006710232 /// XM_006718099 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071806 // protein transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from direct assay /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031305 // integral component of mitochondrial inner membrane // inferred from direct assay </td> <td> 0004649 // poly(ADP-ribose) glycohydrolase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 43.80 </td> <td> 243.25 </td> <td> 1.47 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 218038_at </td> <td> 218038_at </td> <td> NM_018035 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018035.1 /DEF=Homo sapiens hypothetical protein FLJ10241 (FLJ10241), mRNA. /FEA=mRNA /GEN=FLJ10241 /PROD=hypothetical protein FLJ10241 /DB_XREF=gi:8922302 /UG=Hs.279851 hypothetical protein FLJ10241 /FL=gb:NM_018035.1 </td> <td> NM_018035 </td> <td> ATP5S-like </td> <td> ATP5SL </td> <td> 55101 </td> <td> NM_001167867 /// NM_001167868 /// NM_001167869 /// NM_001167870 /// NM_001167871 /// NM_018035 /// NR_030765 /// XM_006723258 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation </td> <td>  </td> <td> 20.75 </td> <td> 104.03 </td> <td> 1.47 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 218462_at </td> <td> 218462_at </td> <td> NM_025065 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025065.1 /DEF=Homo sapiens hypothetical protein FLJ12475 (FLJ12475), mRNA. /FEA=mRNA /GEN=FLJ12475 /PROD=hypothetical protein FLJ12475 /DB_XREF=gi:13376604 /UG=Hs.287863 hypothetical protein FLJ12475 /FL=gb:NM_025065.1 </td> <td> NM_025065 </td> <td> ribosome production factor 1 homolog (S. cerevisiae) </td> <td> RPF1 </td> <td> 80135 </td> <td> NM_025065 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from direct assay /// 0019843 // rRNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 29.45 </td> <td> 334.48 </td> <td> 1.46 </td> <td> 0.18 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202006_at </td> <td> 202006_at </td> <td> NM_002835 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002835.1 /DEF=Homo sapiens protein tyrosine phosphatase, non-receptor type 12 (PTPN12), mRNA.  /FEA=mRNA /GEN=PTPN12 /PROD=protein tyrosine phosphatase, non-receptor type12 /DB_XREF=gi:4506286 /UG=Hs.62 protein tyrosine phosphatase, non-receptor type 12 /FL=gb:D13380.1 gb:M93425.1 gb:NM_002835.1 </td> <td> NM_002835 </td> <td> protein tyrosine phosphatase, non-receptor type 12 </td> <td> PTPN12 </td> <td> 5782 </td> <td> NM_001131008 /// NM_001131009 /// NM_002835 /// XM_005250518 /// XM_006716073 /// XM_006716074 </td> <td> 0006470 // protein dephosphorylation // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement </td> <td> 0002102 // podosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction </td> <td> -35.07 </td> <td> 299.54 </td> <td> -1.46 </td> <td> 0.19 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 214656_x_at </td> <td> 214656_x_at </td> <td> BE790157 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE790157 /FEA=EST /DB_XREF=gi:10211355 /DB_XREF=est:601482981F1 /CLONE=IMAGE:3885236 /UG=Hs.286226 myosin IB </td> <td> BE790157 </td> <td> myosin IC </td> <td> MYO1C </td> <td> 4641 </td> <td> NM_001080779 /// NM_001080950 /// NM_033375 /// XM_005256655 </td> <td> 0006605 // protein targeting // inferred from direct assay /// 0006612 // protein targeting to membrane // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0038089 // positive regulation of cell migration by vascular endothelial growth factor signaling pathway // inferred from mutant phenotype /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0090314 // positive regulation of protein targeting to membrane // inferred from mutant phenotype /// 1900748 // positive regulation of vascular endothelial growth factor signaling pathway // inferred from mutant phenotype /// 2000810 // regulation of tight junction assembly // inferred from mutant phenotype </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005902 // microvillus // inferred from direct assay /// 0005903 // brush border // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0032420 // stereocilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045160 // myosin I complex // inferred from electronic annotation /// 0060171 // stereocilium membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation </td> <td> 26.63 </td> <td> 192.76 </td> <td> 1.46 </td> <td> 0.19 </td> <td> 0.25 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202300_at </td> <td> 202300_at </td> <td> NM_006402 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006402.1 /DEF=Homo sapiens hepatitis B virus x-interacting protein (9.6kD) (XIP), mRNA.  /FEA=mRNA /GEN=XIP /PROD=hepatitis B virus x-interacting protein /DB_XREF=gi:5454169 /UG=Hs.80464 hepatitis B virus x-interacting protein (9.6kD) /FL=gb:AF029890.1 gb:NM_006402.1 </td> <td> NM_006402 </td> <td> late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 </td> <td> LAMTOR5 </td> <td> 10542 </td> <td> NM_006402 </td> <td> 0008361 // regulation of cell size // inferred from mutant phenotype /// 0009615 // response to virus // traceable author statement /// 0019079 // viral genome replication // inferred from electronic annotation /// 0032008 // positive regulation of TOR signaling // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043087 // regulation of GTPase activity // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0061462 // protein localization to lysosome // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0071986 // Ragulator complex // inferred from direct assay </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0032947 // protein complex scaffold // inferred from direct assay </td> <td> 68.80 </td> <td> 485.48 </td> <td> 1.46 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 212262_at </td> <td> 212262_at </td> <td> AA149639 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA149639 /FEA=EST /DB_XREF=gi:1720440 /DB_XREF=est:zl39c06.s1 /CLONE=IMAGE:504298 /UG=Hs.15020 homolog of mouse quaking QKI (KH domain RNA binding protein) /FL=gb:AF142419.1 gb:AF142422.1 </td> <td> AA149639 </td> <td> QKI, KH domain containing, RNA binding </td> <td> QKI </td> <td> 9444 </td> <td> NM_006775 /// NM_206853 /// NM_206854 /// NM_206855 /// XM_005267224 /// XR_245557 /// XR_427977 /// XR_427978 </td> <td> 0001570 // vasculogenesis // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation /// 0008366 // axon ensheathment // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0042759 // long-chain fatty acid biosynthetic process // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -48.48 </td> <td> 250.76 </td> <td> -1.46 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 215792_s_at </td> <td> 215792_s_at </td> <td> AL109978 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL109978.1 /DEF=Novel human gene mapping to chomosome 1. /FEA=mRNA /PROD=hypothetical protein /DB_XREF=gi:5764009 /UG=Hs.261134 hypothetical protein FLJ10737 </td> <td> AL109978 </td> <td> DnaJ (Hsp40) homolog, subfamily C, member 11 </td> <td> DNAJC11 </td> <td> 55735 </td> <td> NM_018198 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 35.07 </td> <td> 128.01 </td> <td> 1.46 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 211703_s_at </td> <td> 211703_s_at </td> <td> AF353990 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF353990.1 /DEF=Homo sapiens beta-amyloid binding protein precursor (BBP) mRNA, complete cds.  /FEA=mRNA /GEN=BBP /PROD=beta-amyloid binding protein precursor /DB_XREF=gi:13625458 /FL=gb:AF353990.1 </td> <td> AF353990 </td> <td> TM2 domain containing 1 </td> <td> TM2D1 </td> <td> 83941 </td> <td> NM_032027 /// XM_005271250 /// XR_246299 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0001540 // beta-amyloid binding // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation </td> <td> 26.42 </td> <td> 178.39 </td> <td> 1.45 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 221853_s_at </td> <td> 221853_s_at </td> <td> N39536 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N39536 /FEA=EST /DB_XREF=gi:1162743 /DB_XREF=est:yv27d07.s1 /CLONE=IMAGE:243949 /UG=Hs.322466 Homo sapiens cDNA: FLJ23491 fis, clone LNG00825, highly similar to HSPM5 Human mRNA for pM5 protein </td> <td> N39536 </td> <td> uncharacterized LOC101060373 /// NODAL modulator 1 /// NODAL modulator 2 /// NODAL modulator 3 </td> <td> LOC101060373 /// NOMO1 /// NOMO2 /// NOMO3 </td> <td> 23420 /// 283820 /// 408050 /// 101060373 </td> <td> NM_001004060 /// NM_001004067 /// NM_014287 /// NM_173614 /// XM_005255318 /// XM_006725195 /// XR_253508 /// XR_430727 </td> <td>  </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> -75.20 </td> <td> 492.47 </td> <td> -1.45 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 204955_at </td> <td> 204955_at </td> <td> NM_006307 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006307.1 /DEF=Homo sapiens sushi-repeat-containing protein, X chromosome (SRPX), mRNA.  /FEA=mRNA /GEN=SRPX /PROD=sushi-repeat-containing protein, X chromosome /DB_XREF=gi:5454085 /UG=Hs.15154 sushi-repeat-containing protein, X chromosome /FL=gb:U78093.1 gb:U61374.1 gb:NM_006307.1 </td> <td> NM_006307 </td> <td> sushi-repeat containing protein, X-linked </td> <td> SRPX </td> <td> 8406 </td> <td> NM_001170750 /// NM_001170751 /// NM_001170752 /// NM_006307 </td> <td> 0001845 // phagolysosome assembly // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0033554 // cellular response to stress // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0060244 // negative regulation of cell proliferation involved in contact inhibition // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005776 // autophagic vacuole // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // traceable author statement </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -157.97 </td> <td> 877.01 </td> <td> -1.45 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 213048_s_at </td> <td> 213048_s_at </td> <td> W26593 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W26593 /FEA=EST /DB_XREF=gi:1307454 /DB_XREF=est:33g5 /UG=Hs.145279 SET translocation (myeloid leukemia-associated) </td> <td> W26593 </td> <td> Homo sapiens mRNA from HIV associated non-Hodgkins lymphoma (clone hl1-98). </td> <td> Y16709 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -443.58 </td> <td> 1991.11 </td> <td> -1.45 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 213892_s_at </td> <td> 213892_s_at </td> <td> AA927724 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA927724 /FEA=EST /DB_XREF=gi:3076544 /DB_XREF=est:om72g04.s1 /CLONE=IMAGE:1552758 /UG=Hs.28914 adenine phosphoribosyltransferase </td> <td> AA927724 </td> <td> adenine phosphoribosyltransferase </td> <td> APRT </td> <td> 353 </td> <td> NM_000485 /// NM_001030018 </td> <td> 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006166 // purine ribonucleoside salvage // inferred from electronic annotation /// 0006168 // adenine salvage // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0007625 // grooming behavior // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0043101 // purine-containing compound salvage // traceable author statement /// 0044209 // AMP salvage // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002055 // adenine binding // inferred from electronic annotation /// 0003999 // adenine phosphoribosyltransferase activity // traceable author statement /// 0016208 // AMP binding // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> 26.10 </td> <td> 187.25 </td> <td> 1.45 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 209141_at </td> <td> 209141_at </td> <td> AW299555 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW299555 /FEA=EST /DB_XREF=gi:6709232 /DB_XREF=est:xs51d10.x1 /CLONE=IMAGE:2773171 /UG=Hs.78563 ubiquitin-conjugating enzyme E2G 1 (homologous to C. elegans UBC7) /FL=gb:BC002775.1 gb:NM_003342.1 gb:D78514.1 </td> <td> AW299555 </td> <td> ubiquitin-conjugating enzyme E2G 1 </td> <td> UBE2G1 </td> <td> 7326 </td> <td> NM_003342 /// NM_182682 </td> <td> 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay </td> <td> 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> -38.17 </td> <td> 422.56 </td> <td> -1.45 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 208754_s_at </td> <td> 208754_s_at </td> <td> AL162068 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL162068.1 /DEF=Homo sapiens mRNA; cDNA DKFZp762G106 (from clone DKFZp762G106); complete cds.  /FEA=mRNA /GEN=DKFZp762G106 /PROD=hypothetical protein /DB_XREF=gi:7328143 /UG=Hs.179662 nucleosome assembly protein 1-like 1 /FL=gb:BC002387.1 gb:AL162068.1 </td> <td> AL162068 </td> <td> nucleosome assembly protein 1-like 1 </td> <td> NAP1L1 </td> <td> 4673 </td> <td> NM_004537 /// NM_139207 /// XM_005268895 /// XM_005268896 /// XM_006719422 /// XM_006719423 /// XM_006719424 /// XM_006719425 /// XR_245930 /// XR_245931 /// XR_245932 </td> <td> 0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 28.68 </td> <td> 326.86 </td> <td> 1.45 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 209418_s_at </td> <td> 209418_s_at </td> <td> BC003615 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003615.1 /DEF=Homo sapiens, gene from NF2meningioma region of 22q12, clone MGC:1540, mRNA, complete cds.  /FEA=mRNA /PROD=gene from NF2meningioma region of 22q12 /DB_XREF=gi:13177658 /UG=Hs.75361 gene from NF2meningioma region of 22q12 /FL=gb:BC003615.1 gb:NM_003678.1 gb:AB023200.1 </td> <td> BC003615 </td> <td> THO complex 5 </td> <td> THOC5 </td> <td> 8563 </td> <td> NM_001002877 /// NM_001002878 /// NM_001002879 /// NM_003678 /// XM_005261797 /// XM_005261798 /// XM_005261799 /// XM_005261800 /// XM_005261801 /// XM_006724347 /// XR_244394 /// XR_430413 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from direct assay /// 0032786 // positive regulation of DNA-templated transcription, elongation // inferred from mutant phenotype /// 0045650 // negative regulation of macrophage differentiation // inferred from electronic annotation /// 0046784 // viral mRNA export from host cell nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation /// 0060215 // primitive hemopoiesis // inferred from sequence or structural similarity /// 2000002 // negative regulation of DNA damage checkpoint // inferred from mutant phenotype </td> <td> 0000346 // transcription export complex // inferred from direct assay /// 0000347 // THO complex // inferred from direct assay /// 0000445 // THO complex part of transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -19.42 </td> <td> 120.01 </td> <td> -1.45 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200820_at </td> <td> 200820_at </td> <td> NM_002812 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002812.1 /DEF=Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 (PSMD8), mRNA.  /FEA=mRNA /GEN=PSMD8 /PROD=proteasome (prosome, macropain) 26S subunit,non-ATPase, 8 /DB_XREF=gi:4506232 /UG=Hs.78466 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 /FL=gb:D38047.1 gb:BC001164.1 gb:NM_002812.1 </td> <td> NM_002812 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 </td> <td> PSMD8 </td> <td> 5714 </td> <td> NM_002812 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005838 // proteasome regulatory particle // inferred from electronic annotation /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> -22.02 </td> <td> 341.39 </td> <td> -1.45 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 204236_at </td> <td> 204236_at </td> <td> NM_002017 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002017.2 /DEF=Homo sapiens Friend leukemia virus integration 1 (FLI1), mRNA. /FEA=mRNA /GEN=FLI1 /PROD=Friend leukemia virus integration 1 /DB_XREF=gi:7110592 /UG=Hs.108043 Friend leukemia virus integration 1 /FL=gb:BC001670.1 gb:M98833.3 gb:NM_002017.2 </td> <td> NM_002017 </td> <td> Fli-1 proto-oncogene, ETS transcription factor </td> <td> FLI1 </td> <td> 2313 </td> <td> NM_001167681 /// NM_001271010 /// NM_001271012 /// NM_002017 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0007599 // hemostasis // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0030154 // cell differentiation // not recorded </td> <td> 0005634 // nucleus // not recorded </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -62.98 </td> <td> 190.86 </td> <td> -1.45 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 208613_s_at </td> <td> 208613_s_at </td> <td> AV712733 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV712733 /FEA=EST /DB_XREF=gi:10732039 /DB_XREF=est:AV712733 /CLONE=DCAACE01 /UG=Hs.81008 filamin B, beta (actin-binding protein-278) /FL=gb:AF043045.1 gb:AF042166.1 gb:M62994.1 gb:NM_001457.1 </td> <td> AV712733 </td> <td> filamin B, beta </td> <td> FLNB </td> <td> 2317 </td> <td> NM_001164317 /// NM_001164318 /// NM_001164319 /// NM_001457 /// XM_005264977 /// XM_005264978 /// XM_005264981 /// XM_005264982 /// XM_006713067 </td> <td> 0007016 // cytoskeletal anchoring at plasma membrane // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016021 // integral component of membrane // non-traceable author statement /// 0030018 // Z disc // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -88.72 </td> <td> 702.04 </td> <td> -1.45 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 213477_x_at </td> <td> 213477_x_at </td> <td> AL515273 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL515273 /FEA=EST /DB_XREF=gi:12778766 /DB_XREF=est:AL515273 /CLONE=CL0BB016ZE08 (3 prime) /UG=Hs.284136 PRO2047 protein </td> <td> AL515273 </td> <td> eukaryotic translation elongation factor 1 alpha 1 </td> <td> EEF1A1 </td> <td> 1915 </td> <td> NM_001402 /// NM_001403 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005853 // eukaryotic translation elongation factor 1 complex // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0019901 // protein kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -532.78 </td> <td> 4619.16 </td> <td> -1.45 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202345_s_at </td> <td> 202345_s_at </td> <td> NM_001444 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001444.1 /DEF=Homo sapiens fatty acid binding protein 5 (psoriasis-associated) (FABP5), mRNA.  /FEA=mRNA /GEN=FABP5 /PROD=fatty acid binding protein 5(psoriasis-associated) /DB_XREF=gi:4557580 /UG=Hs.153179 fatty acid binding protein 5 (psoriasis-associated) /FL=gb:M94856.1 gb:NM_001444.1 </td> <td> NM_001444 </td> <td> fatty acid binding protein 5 (psoriasis-associated) </td> <td> FABP5 </td> <td> 2171 </td> <td> NM_001444 </td> <td> 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006656 // phosphatidylcholine biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0009611 // response to wounding // inferred from electronic annotation /// 0015758 // glucose transport // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005504 // fatty acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // traceable author statement </td> <td> -142.82 </td> <td> 1030.29 </td> <td> -1.44 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202545_at </td> <td> 202545_at </td> <td> NM_006254 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006254.1 /DEF=Homo sapiens protein kinase C, delta (PRKCD), mRNA. /FEA=mRNA /GEN=PRKCD /PROD=protein kinase C, delta /DB_XREF=gi:5453969 /UG=Hs.155342 protein kinase C, delta /FL=gb:L07860.1 gb:L07861.1 gb:D10495.1 gb:NM_006254.1 </td> <td> NM_006254 </td> <td> protein kinase C, delta </td> <td> PRKCD </td> <td> 5580 </td> <td> NM_006254 /// NM_212539 /// XM_006713257 /// XM_006713258 /// XM_006713259 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010469 // regulation of receptor activity // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0015810 // aspartate transport // inferred from electronic annotation /// 0016064 // immunoglobulin mediated immune response // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0023021 // termination of signal transduction // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0030837 // negative regulation of actin filament polymerization // inferred from sequence or structural similarity /// 0032091 // negative regulation of protein binding // traceable author statement /// 0032613 // interleukin-10 production // inferred from electronic annotation /// 0032615 // interleukin-12 production // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032930 // positive regulation of superoxide anion generation // inferred from mutant phenotype /// 0032963 // collagen metabolic process // inferred from electronic annotation /// 0034351 // negative regulation of glial cell apoptotic process // inferred from mutant phenotype /// 0035307 // positive regulation of protein dephosphorylation // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0042100 // B cell proliferation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from direct assay /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043200 // response to amino acid // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // traceable author statement /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050728 // negative regulation of inflammatory response // inferred by curator /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050821 // protein stabilization // non-traceable author statement /// 0051490 // negative regulation of filopodium assembly // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0090331 // negative regulation of platelet aggregation // inferred from sequence or structural similarity /// 0090398 // cellular senescence // inferred from mutant phenotype /// 1900163 // positive regulation of phospholipid scramblase activity // inferred from mutant phenotype /// 2000304 // positive regulation of ceramide biosynthetic process // inferred from mutant phenotype /// 2000753 // positive regulation of glucosylceramide catabolic process // inferred from mutant phenotype /// 2000755 // positive regulation of sphingomyelin catabolic process // inferred from mutant phenotype /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from mutant phenotype /// 2001235 // positive regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004697 // protein kinase C activity // inferred from sequence or structural similarity /// 0004699 // calcium-independent protein kinase C activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008047 // enzyme activator activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070976 // TIR domain binding // inferred from electronic annotation </td> <td> -21.00 </td> <td> 29.95 </td> <td> -1.44 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 204342_at </td> <td> 204342_at </td> <td> NM_013386 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013386.1 /DEF=Homo sapiens hypothetical protein (DKFZp586G0123), mRNA. /FEA=mRNA /GEN=DKFZp586G0123 /PROD=hypothetical protein /DB_XREF=gi:9558726 /UG=Hs.24713 hypothetical protein /FL=gb:AL050209.1 gb:NM_013386.1 </td> <td> NM_013386 </td> <td> solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 </td> <td> SLC25A24 </td> <td> 29957 </td> <td> NM_013386 /// NM_213651 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006839 // mitochondrial transport // inferred from mutant phenotype /// 0010941 // regulation of cell death // inferred from mutant phenotype /// 0015867 // ATP transport // inferred from mutant phenotype /// 0034599 // cellular response to oxidative stress // inferred from mutant phenotype /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay </td> <td> 0005347 // ATP transmembrane transporter activity // inferred from mutant phenotype /// 0005509 // calcium ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 63.05 </td> <td> 274.45 </td> <td> 1.44 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 211063_s_at </td> <td> 211063_s_at </td> <td> BC006403 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006403.1 /DEF=Homo sapiens, NCK adaptor protein 1, clone MGC:12668, mRNA, complete cds.  /FEA=mRNA /PROD=NCK adaptor protein 1 /DB_XREF=gi:13623576 /FL=gb:BC006403.1 </td> <td> BC006403 </td> <td> NCK adaptor protein 1 </td> <td> NCK1 </td> <td> 4690 </td> <td> NM_001190796 /// NM_001291999 /// NM_006153 /// XM_005247498 /// XM_006713650 /// XM_006713651 /// XM_006713652 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007172 // signal complex assembly // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from mutant phenotype /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from mutant phenotype /// 0042110 // T cell activation // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051707 // response to other organism // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012506 // vesicle membrane // inferred from electronic annotation </td> <td> 0004860 // protein kinase inhibitor activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008093 // cytoskeletal adaptor activity // non-traceable author statement /// 0019887 // protein kinase regulator activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction </td> <td> 18.97 </td> <td> 172.84 </td> <td> 1.44 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 204641_at </td> <td> 204641_at </td> <td> NM_002497 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002497.1 /DEF=Homo sapiens NIMA (never in mitosis gene a)-related kinase 2 (NEK2), mRNA.  /FEA=mRNA /GEN=NEK2 /PROD=NIMA (never in mitosis gene a)-related kinase 2 /DB_XREF=gi:4505372 /UG=Hs.153704 NIMA (never in mitosis gene a)-related kinase 2 /FL=gb:NM_002497.1 gb:U11050.1 </td> <td> NM_002497 </td> <td> NIMA-related kinase 2 </td> <td> NEK2 </td> <td> 4751 </td> <td> NM_001204182 /// NM_001204183 /// NM_002497 /// XM_005273147 </td> <td> 0000070 // mitotic sister chromatid segregation // inferred from electronic annotation /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001824 // blastocyst development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from direct assay /// 0007067 // mitotic nuclear division // traceable author statement /// 0007088 // regulation of mitosis // traceable author statement /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from electronic annotation /// 0046602 // regulation of mitotic centrosome separation // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype /// 0051225 // spindle assembly // traceable author statement /// 0051299 // centrosome separation // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0090307 // spindle assembly involved in mitosis // inferred from electronic annotation /// 1903126 // negative regulation of centriole-centriole cohesion // inferred from mutant phenotype </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0043234 // protein complex // inferred from mutant phenotype /// 0045171 // intercellular bridge // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -25.50 </td> <td> 102.70 </td> <td> -1.44 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 205770_at </td> <td> 205770_at </td> <td> NM_000637 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000637.1 /DEF=Homo sapiens glutathione reductase (GSR), mRNA. /FEA=mRNA /GEN=GSR /PROD=glutathione reductase /DB_XREF=gi:10835188 /UG=Hs.121524 glutathione reductase /FL=gb:NM_000637.1 gb:AF228704.1 </td> <td> NM_000637 </td> <td> glutathione reductase </td> <td> GSR </td> <td> 2936 </td> <td> NM_000637 /// NM_001195102 /// NM_001195103 /// NM_001195104 </td> <td> 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004362 // glutathione-disulfide reductase activity // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016668 // oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation </td> <td> -22.18 </td> <td> 86.19 </td> <td> -1.44 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 202363_at </td> <td> 202363_at </td> <td> AF231124 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF231124.1 /DEF=Homo sapiens testican-1 mRNA, complete cds. /FEA=mRNA /PROD=testican-1 /DB_XREF=gi:7248844 /UG=Hs.93029 sparcosteonectin, cwcv and kazal-like domains proteoglycan (testican) /FL=gb:NM_004598.1 gb:AF231124.1 </td> <td> AF231124 </td> <td> sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 </td> <td> SPOCK1 </td> <td> 6695 </td> <td> NM_004598 </td> <td> 0001558 // regulation of cell growth // non-traceable author statement /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0007155 // cell adhesion // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0010812 // negative regulation of cell-substrate adhesion // inferred from direct assay /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0010977 // negative regulation of neuron projection development // inferred from direct assay /// 0021953 // central nervous system neuron differentiation // inferred from sequence or structural similarity /// 0022008 // neurogenesis // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // non-traceable author statement /// 0016528 // sarcoplasm // inferred from sequence or structural similarity /// 0031594 // neuromuscular junction // inferred from sequence or structural similarity /// 0033268 // node of Ranvier // inferred from sequence or structural similarity </td> <td> 0004867 // serine-type endopeptidase inhibitor activity // non-traceable author statement /// 0004869 // cysteine-type endopeptidase inhibitor activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0008191 // metalloendopeptidase inhibitor activity // inferred from direct assay </td> <td> -80.50 </td> <td> 1399.20 </td> <td> -1.44 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 217752_s_at </td> <td> 217752_s_at </td> <td> NM_018235 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018235.1 /DEF=Homo sapiens hypothetical protein FLJ10830 (FLJ10830), mRNA. /FEA=mRNA /GEN=FLJ10830 /PROD=hypothetical protein FLJ10830 /DB_XREF=gi:8922698 /UG=Hs.273230 hypothetical protein FLJ10830 /FL=gb:BC001375.1 gb:BC003176.1 gb:NM_018235.1 </td> <td> NM_018235 </td> <td> CNDP dipeptidase 2 (metallopeptidase M20 family) </td> <td> CNDP2 </td> <td> 55748 </td> <td> NM_001168499 /// NM_018235 /// XM_005266728 /// XM_006722502 /// XM_006722503 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1901687 // glutathione derivative biosynthetic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004180 // carboxypeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016805 // dipeptidase activity // inferred from electronic annotation /// 0034701 // tripeptidase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -34.60 </td> <td> 255.05 </td> <td> -1.44 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 35150_at </td> <td> 35150_at </td> <td> X60592 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. X60592:Human CDw40 mRNA for nerve growth factor receptor-related B-lymphocyte activation molecule /cds=(47,880) /gb=X60592 /gi=29850 /ug=Hs.25648 /len=1004 </td> <td> X60592 </td> <td> CD40 molecule, TNF receptor superfamily member 5 </td> <td> CD40 </td> <td> 958 </td> <td> NM_001250 /// NM_152854 /// XM_005260617 /// XM_005260618 /// XM_005260619 /// XM_006723889 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0002376 // immune system process // inferred from electronic annotation /// 0002768 // immune response-regulating cell surface receptor signaling pathway // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006874 // cellular calcium ion homeostasis // inferred from mutant phenotype /// 0006954 // inflammatory response // inferred from electronic annotation /// 0030168 // platelet activation // non-traceable author statement /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0032735 // positive regulation of interleukin-12 production // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from mutant phenotype /// 0042100 // B cell proliferation // non-traceable author statement /// 0042113 // B cell activation // inferred from electronic annotation /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0043089 // positive regulation of Cdc42 GTPase activity // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043406 // positive regulation of MAP kinase activity // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048304 // positive regulation of isotype switching to IgG isotypes // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0051023 // regulation of immunoglobulin secretion // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0090037 // positive regulation of protein kinase C signaling // inferred from mutant phenotype /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003823 // antigen binding // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> 35.65 </td> <td> 179.18 </td> <td> 1.44 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 211943_x_at </td> <td> 211943_x_at </td> <td> AL565449 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL565449 /FEA=EST /DB_XREF=gi:12916836 /DB_XREF=est:AL565449 /CLONE=CS0DF005YE20 (3 prime) /UG=Hs.279860 tumor protein, translationally-controlled 1 </td> <td> AL565449 </td> <td> uncharacterized LOC101928826 /// tumor protein, translationally-controlled 1 </td> <td> LOC101928826 /// TPT1 </td> <td> 7178 /// 101928826 </td> <td> NM_001286272 /// NM_001286273 /// NM_003295 /// XR_242670 /// XR_250536 /// XR_252641 </td> <td> 0006816 // calcium ion transport // inferred by curator /// 0006874 // cellular calcium ion homeostasis // inferred by curator /// 0009615 // response to virus // inferred from expression pattern /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 1902230 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage // inferred from mutant phenotype /// 2000384 // negative regulation of ectoderm development // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005771 // multivesicular body // inferred from direct assay /// 0045298 // tubulin complex // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -345.20 </td> <td> 3353.88 </td> <td> -1.43 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 200780_x_at </td> <td> 200780_x_at </td> <td> NM_000516 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000516.2 /DEF=Homo sapiens guanine nucleotide binding protein (G protein), alpha stimulating activity polypeptide 1 (GNAS1), mRNA.  /FEA=mRNA /GEN=GNAS1 /PROD=guanine nucleotide binding protein (G protein),alpha stimulating activity polypeptide 1 /DB_XREF=gi:8659565 /UG=Hs.273385 guanine nucleotide binding protein (G protein), alpha stimulating activity polypeptide 1 /FL=gb:BC002722.1 gb:AF088185.1 gb:NM_000516.2 </td> <td> NM_000516 </td> <td> GNAS complex locus </td> <td> GNAS </td> <td> 2778 </td> <td> NM_000516 /// NM_001077488 /// NM_001077489 /// NM_001077490 /// NM_016592 /// NM_080425 /// NM_080426 /// NR_003259 /// XM_005260401 /// XM_005260402 /// XM_006723781 /// XM_006723782 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // not recorded /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007565 // female pregnancy // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007606 // sensory perception of chemical stimulus // not recorded /// 0007608 // sensory perception of smell // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0009306 // protein secretion // non-traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040015 // negative regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040032 // post-embryonic body morphogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043950 // positive regulation of cAMP-mediated signaling // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0046907 // intracellular transport // non-traceable author statement /// 0048589 // developmental growth // inferred from direct assay /// 0048589 // developmental growth // inferred from mutant phenotype /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050890 // cognition // inferred from direct assay /// 0050890 // cognition // inferred from mutant phenotype /// 0051216 // cartilage development // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060348 // bone development // inferred from direct assay /// 0060348 // bone development // inferred from mutant phenotype /// 0060789 // hair follicle placode formation // inferred from direct assay /// 0060789 // hair follicle placode formation // inferred from mutant phenotype /// 0070527 // platelet aggregation // inferred from direct assay /// 0070527 // platelet aggregation // inferred from mutant phenotype /// 0071107 // response to parathyroid hormone // inferred from mutant phenotype /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071514 // genetic imprinting // inferred from electronic annotation /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity /// 0071880 // adenylate cyclase-activating adrenergic receptor signaling pathway // inferred from direct assay </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from sequence or structural similarity /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031224 // intrinsic component of membrane // inferred from direct assay /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // not recorded /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004016 // adenylate cyclase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from direct assay /// 0005159 // insulin-like growth factor receptor binding //  /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0031698 // beta-2 adrenergic receptor binding //  /// 0031748 // D1 dopamine receptor binding //  /// 0031852 // mu-type opioid receptor binding // not recorded /// 0035255 // ionotropic glutamate receptor binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051430 // corticotropin-releasing hormone receptor 1 binding // </td> <td> -357.02 </td> <td> 2414.74 </td> <td> -1.43 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 211970_x_at </td> <td> 211970_x_at </td> <td> BG026805 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG026805 /FEA=EST /DB_XREF=gi:12414790 /DB_XREF=est:602294278F1 /CLONE=IMAGE:4388898 /UG=Hs.14376 actin, gamma 1 </td> <td> BG026805 </td> <td> actin, beta /// actin, gamma 1 </td> <td> ACTB /// ACTG1 </td> <td> 60 /// 71 </td> <td> NM_001101 /// NM_001199954 /// NM_001614 /// NR_037688 /// XM_006715764 /// XM_006722048 /// XM_006722049 </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0006325 // chromatin organization // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred by curator /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction </td> <td> -863.85 </td> <td> 5540.18 </td> <td> -1.43 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.57 </td> </tr>
  <tr> <td> 214701_s_at </td> <td> 214701_s_at </td> <td> AJ276395 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AJ276395.1 /DEF=Homo sapiens mRNA for MSF-FN70 (FN gene). /FEA=mRNA /GEN=FN /PROD=migration stimulation factor FN70 /DB_XREF=gi:12053816 /UG=Hs.321592 Homo sapiens mRNA for MSF-FN70 (FN gene) </td> <td> AJ276395 </td> <td> fibronectin 1 </td> <td> FN1 </td> <td> 2335 </td> <td> NM_002026 /// NM_054034 /// NM_212474 /// NM_212475 /// NM_212476 /// NM_212478 /// NM_212482 /// XM_005246397 /// XM_005246398 /// XM_005246399 /// XM_005246400 /// XM_005246401 /// XM_005246402 /// XM_005246403 /// XM_005246404 /// XM_005246405 /// XM_005246406 /// XM_005246407 /// XM_005246408 /// XM_005246409 /// XM_005246410 /// XM_005246411 /// XM_005246412 /// XM_005246413 /// XM_005246414 /// XM_005246415 /// XM_005246416 /// XM_005246417 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006953 // acute-phase response // inferred from electronic annotation /// 0007044 // cell-substrate junction assembly // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007161 // calcium-independent cell-matrix adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009611 // response to wounding // non-traceable author statement /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0018149 // peptide cross-linking // inferred from direct assay /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005577 // fibrinogen complex // inferred from direct assay /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0005178 // integrin binding // inferred from direct assay /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0008201 // heparin binding // non-traceable author statement /// 0016504 // peptidase activator activity // inferred from electronic annotation </td> <td> -169.95 </td> <td> 350.00 </td> <td> -1.43 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.58 </td> </tr>
  <tr> <td> 211761_s_at </td> <td> 211761_s_at </td> <td> BC005975 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005975.1 /DEF=Homo sapiens, calcyclin binding protein, clone MGC:14660, mRNA, complete cds.  /FEA=mRNA /PROD=calcyclin binding protein /DB_XREF=gi:13543650 /FL=gb:BC005975.1 </td> <td> BC005975 </td> <td> calcyclin binding protein </td> <td> CACYBP </td> <td> 27101 </td> <td> NM_001007214 /// NM_014412 /// XM_005245092 </td> <td> 0007507 // heart development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060416 // response to growth hormone // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005641 // nuclear envelope lumen // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0030877 // beta-catenin destruction complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> 44.70 </td> <td> 267.40 </td> <td> 1.43 </td> <td> 0.19 </td> <td> 0.26 </td> <td> -4.58 </td> </tr>
  <tr> <td> 217869_at </td> <td> 217869_at </td> <td> NM_016142 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016142.1 /DEF=Homo sapiens steroid dehydrogenase homolog (LOC51144), mRNA. /FEA=mRNA /GEN=LOC51144 /PROD=steroid dehydrogenase homolog /DB_XREF=gi:7705854 /UG=Hs.279617 steroid dehydrogenase homolog /FL=gb:AF078850.1 gb:NM_016142.1 </td> <td> NM_016142 </td> <td> hydroxysteroid (17-beta) dehydrogenase 12 </td> <td> HSD17B12 </td> <td> 51144 </td> <td> NM_016142 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006703 // estrogen biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation </td> <td> 0001968 // fibronectin binding // inferred from electronic annotation /// 0004303 // estradiol 17-beta-dehydrogenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation </td> <td> 33.68 </td> <td> 525.04 </td> <td> 1.42 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 213145_at </td> <td> 213145_at </td> <td> BF001666 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF001666 /FEA=EST /DB_XREF=gi:10701941 /DB_XREF=est:7g91d12.x1 /CLONE=IMAGE:3313847 /UG=Hs.12460 Homo sapiens clone 23870 mRNA sequence </td> <td> BF001666 </td> <td> F-box and leucine-rich repeat protein 14 </td> <td> FBXL14 </td> <td> 144699 </td> <td> NM_152441 </td> <td> 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> -19.02 </td> <td> 95.76 </td> <td> -1.42 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 208689_s_at </td> <td> 208689_s_at </td> <td> BC003560 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003560.1 /DEF=Homo sapiens, ribophorin II, clone MGC:1817, mRNA, complete cds. /FEA=mRNA /PROD=ribophorin II /DB_XREF=gi:13097707 /UG=Hs.75722 ribophorin II /FL=gb:BC003560.1 gb:NM_002951.1 </td> <td> BC003560 </td> <td> ribophorin II </td> <td> RPN2 </td> <td> 6185 </td> <td> NM_001135771 /// NM_002951 /// XM_005260491 /// XM_006723849 /// XM_006723850 /// XM_006723851 /// XM_006723852 </td> <td> 0006412 // translation // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // non-traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from electronic annotation </td> <td> -71.30 </td> <td> 787.33 </td> <td> -1.42 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 212718_at </td> <td> 212718_at </td> <td> BF797555 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF797555 /FEA=EST /DB_XREF=gi:12102609 /DB_XREF=est:602257339F1 /CLONE=IMAGE:4340912 /UG=Hs.5324 hypothetical protein </td> <td> BF797555 </td> <td> poly(A) polymerase alpha </td> <td> PAPOLA </td> <td> 10914 </td> <td> NM_001252006 /// NM_001252007 /// NM_001293627 /// NM_001293628 /// NM_001293632 /// NM_032632 /// XM_005267280 /// XM_005267281 /// XM_005267282 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // non-traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031123 // RNA 3'-end processing // inferred from electronic annotation /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0043631 // RNA polyadenylation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation /// 0004652 // polynucleotide adenylyltransferase activity // not recorded /// 0004652 // polynucleotide adenylyltransferase activity // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -47.62 </td> <td> 568.36 </td> <td> -1.42 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 216442_x_at </td> <td> 216442_x_at </td> <td> AK026737 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026737.1 /DEF=Homo sapiens cDNA: FLJ23084 fis, clone LNG06602, highly similar to HSFIB1 Human mRNA for fibronectin (FN precursor).  /FEA=mRNA /DB_XREF=gi:10439658 /UG=Hs.287820 fibronectin 1 </td> <td> AK026737 </td> <td> fibronectin 1 </td> <td> FN1 </td> <td> 2335 </td> <td> NM_002026 /// NM_054034 /// NM_212474 /// NM_212475 /// NM_212476 /// NM_212478 /// NM_212482 /// XM_005246397 /// XM_005246398 /// XM_005246399 /// XM_005246400 /// XM_005246401 /// XM_005246402 /// XM_005246403 /// XM_005246404 /// XM_005246405 /// XM_005246406 /// XM_005246407 /// XM_005246408 /// XM_005246409 /// XM_005246410 /// XM_005246411 /// XM_005246412 /// XM_005246413 /// XM_005246414 /// XM_005246415 /// XM_005246416 /// XM_005246417 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006953 // acute-phase response // inferred from electronic annotation /// 0007044 // cell-substrate junction assembly // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007161 // calcium-independent cell-matrix adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009611 // response to wounding // non-traceable author statement /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0018149 // peptide cross-linking // inferred from direct assay /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005577 // fibrinogen complex // inferred from direct assay /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0005178 // integrin binding // inferred from direct assay /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0008201 // heparin binding // non-traceable author statement /// 0016504 // peptidase activator activity // inferred from electronic annotation </td> <td> -377.72 </td> <td> 3294.69 </td> <td> -1.42 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200097_s_at </td> <td> 200097_s_at </td> <td> AI701949 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI701949 /FEA=EST /DB_XREF=gi:4989849 /DB_XREF=est:tq09c07.x1 /CLONE=IMAGE:2208300 /UG=Hs.129548 heterogeneous nuclear ribonucleoprotein K </td> <td> AI701949 </td> <td> heterogeneous nuclear ribonucleoprotein K </td> <td> HNRNPK </td> <td> 3190 </td> <td> NM_002140 /// NM_031262 /// NM_031263 /// XM_005251960 /// XM_005251961 /// XM_005251963 /// XM_005251964 /// XM_005251965 /// XM_005251966 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010988 // regulation of low-density lipoprotein particle clearance // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045716 // positive regulation of low-density lipoprotein particle receptor biosynthetic process // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from mutant phenotype /// 0072369 // regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0002102 // podosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from mutant phenotype /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -37.68 </td> <td> 1054.99 </td> <td> -1.42 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 206854_s_at </td> <td> 206854_s_at </td> <td> NM_003188 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003188.1 /DEF=Homo sapiens mitogen-activated protein kinase kinase kinase 7 (MAP3K7), mRNA.  /FEA=mRNA /GEN=MAP3K7 /PROD=mitogen-activated protein kinase kinase kinase7 /DB_XREF=gi:4507360 /UG=Hs.7510 mitogen-activated protein kinase kinase kinase 7 /FL=gb:AB009356.1 gb:NM_003188.1 </td> <td> NM_003188 </td> <td> mitogen-activated protein kinase kinase kinase 7 </td> <td> MAP3K7 </td> <td> 6885 </td> <td> NM_003188 /// NM_145331 /// NM_145332 /// NM_145333 /// XM_006715553 </td> <td> 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from direct assay /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0000187 // activation of MAPK activity // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002726 // positive regulation of T cell cytokine production // inferred from mutant phenotype /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from mutant phenotype /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032743 // positive regulation of interleukin-2 production // inferred from mutant phenotype /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // non-traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050870 // positive regulation of T cell activation // inferred by curator /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // inferred from direct assay /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008385 // IkappaB kinase complex // inferred from physical interaction /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004708 // MAP kinase kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0097110 // scaffold protein binding // inferred from direct assay </td> <td> 24.55 </td> <td> 107.42 </td> <td> 1.42 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 206331_at </td> <td> 206331_at </td> <td> NM_005795 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005795.1 /DEF=Homo sapiens calcitonin receptor-like (CALCRL), mRNA. /FEA=mRNA /GEN=CALCRL /PROD=calcitonin receptor-like /DB_XREF=gi:5031620 /UG=Hs.152175 calcitonin receptor-like /FL=gb:L76380.1 gb:NM_005795.1 </td> <td> NM_005795 </td> <td> calcitonin receptor-like </td> <td> CALCRL </td> <td> 10203 </td> <td> NM_001271751 /// NM_005795 /// XM_005246231 /// XM_005246232 /// XM_005246234 </td> <td> 0001525 // angiogenesis // inferred from direct assay /// 0006171 // cAMP biosynthetic process // inferred from direct assay /// 0006816 // calcium ion transport // inferred from direct assay /// 0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0015031 // protein transport // inferred from direct assay /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0031623 // receptor internalization // inferred from direct assay /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0071329 // cellular response to sucrose stimulus // inferred from direct assay </td> <td> 0005764 // lysosome // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0001605 // adrenomedullin receptor activity // inferred from direct assay /// 0001635 // calcitonin gene-related polypeptide receptor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004948 // calcitonin receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from direct assay </td> <td> 38.98 </td> <td> 330.91 </td> <td> 1.42 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 220264_s_at </td> <td> 220264_s_at </td> <td> NM_020960 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020960.1 /DEF=Homo sapiens KIAA1624 protein (KIAA1624), mRNA. /FEA=mRNA /GEN=KIAA1624 /PROD=KIAA1624 protein /DB_XREF=gi:13470087 /UG=Hs.6639 KIAA1624 protein /FL=gb:NM_020960.1 </td> <td> NM_020960 </td> <td> G protein-coupled receptor 107 </td> <td> GPR107 </td> <td> 57720 </td> <td> NM_001136557 /// NM_001136558 /// NM_001287346 /// NM_020960 /// XM_006717196 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 17.65 </td> <td> 28.60 </td> <td> 1.42 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 222104_x_at </td> <td> 222104_x_at </td> <td> AI569458 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI569458 /FEA=EST /DB_XREF=gi:4532832 /DB_XREF=est:tn87c02.x1 /CLONE=IMAGE:2176514 /UG=Hs.90304 general transcription factor IIH, polypeptide 3 (34kD subunit) /FL=gb:NM_001516.1 </td> <td> AI569458 </td> <td> general transcription factor IIH, polypeptide 3, 34kDa </td> <td> GTF2H3 </td> <td> 2967 </td> <td> NM_001271866 /// NM_001271867 /// NM_001271868 /// NM_001516 /// XM_005253568 </td> <td> 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006362 // transcription elongation from RNA polymerase I promoter // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006412 // translation // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0000439 // core TFIIH complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005675 // holo TFIIH complex // inferred from direct assay </td> <td> 0003684 // damaged DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from direct assay /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -18.40 </td> <td> 71.38 </td> <td> -1.41 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 219315_s_at </td> <td> 219315_s_at </td> <td> NM_024600 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024600.1 /DEF=Homo sapiens hypothetical protein FLJ20898 (FLJ20898), mRNA. /FEA=mRNA /GEN=FLJ20898 /PROD=hypothetical protein FLJ20898 /DB_XREF=gi:13375800 /UG=Hs.25549 hypothetical protein FLJ20898 /FL=gb:NM_024600.1 </td> <td> NM_024600 </td> <td> transmembrane protein 204 </td> <td> TMEM204 </td> <td> 79652 </td> <td> NM_001256541 /// NM_024600 </td> <td> 0001945 // lymph vessel development // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0030947 // regulation of vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -22.18 </td> <td> 141.84 </td> <td> -1.41 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203392_s_at </td> <td> 203392_s_at </td> <td> NM_001328 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001328.1 /DEF=Homo sapiens C-terminal binding protein 1 (CTBP1), mRNA. /FEA=mRNA /GEN=CTBP1 /PROD=C-terminal binding protein 1 /DB_XREF=gi:4557496 /UG=Hs.239737 C-terminal binding protein 1 /FL=gb:U37408.1 gb:AF091555.1 gb:NM_001328.1 </td> <td> NM_001328 </td> <td> C-terminal binding protein 1 </td> <td> CTBP1 </td> <td> 1487 </td> <td> NM_001012614 /// NM_001328 /// XM_005272261 /// XM_005272262 /// XM_005272263 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007030 // Golgi organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // inferred from mutant phenotype /// 0034401 // regulation of transcription by chromatin organization // inferred from mutant phenotype /// 0035067 // negative regulation of histone acetylation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0051726 // regulation of cell cycle // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0090241 // negative regulation of histone H4 acetylation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity </td> <td> 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004616 // phosphogluconate dehydrogenase (decarboxylating) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from sequence or structural similarity /// 0070491 // repressing transcription factor binding // inferred from physical interaction </td> <td> 32.55 </td> <td> 312.68 </td> <td> 1.41 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200092_s_at </td> <td> 200092_s_at </td> <td> BF216701 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF216701 /FEA=EST /DB_XREF=gi:11110287 /DB_XREF=est:601884615F1 /CLONE=IMAGE:4103235 /UG=Hs.179779 ribosomal protein L37 </td> <td> BF216701 </td> <td> ribosomal protein L37 </td> <td> RPL37 </td> <td> 6167 </td> <td> NM_000997 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0019843 // rRNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -204.30 </td> <td> 2392.85 </td> <td> -1.41 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 202654_x_at </td> <td> 202654_x_at </td> <td> NM_022826 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022826.1 /DEF=Homo sapiens hypothetical protein DKFZp586F1122 similar to axotrophin (DKFZP586F1122), mRNA.  /FEA=mRNA /GEN=DKFZP586F1122 /PROD=hypothetical protein DKFZp586F1122 similar toaxotrophin /DB_XREF=gi:12383065 /UG=Hs.5306 hypothetical protein DKFZp586F1122 similar to axotrophin /FL=gb:NM_022826.1 </td> <td> NM_022826 </td> <td> membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase </td> <td> MARCH7 </td> <td> 64844 </td> <td> NM_001282805 /// NM_001282806 /// NM_001282807 /// NM_022826 /// XM_005246773 /// XM_005246774 /// XR_427106 </td> <td> 0006909 // phagocytosis // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -28.52 </td> <td> 177.39 </td> <td> -1.41 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201153_s_at </td> <td> 201153_s_at </td> <td> NM_021038 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021038.1 /DEF=Homo sapiens muscleblind (Drosophila)-like (MBNL), mRNA. /FEA=mRNA /GEN=MBNL /PROD=muscleblind (Drosophila)-like /DB_XREF=gi:10518339 /UG=Hs.28578 muscleblind (Drosophila)-like /FL=gb:NM_021038.1 gb:AB007888.1 </td> <td> NM_021038 </td> <td> muscleblind-like splicing regulator 1 </td> <td> MBNL1 </td> <td> 4154 </td> <td> NM_021038 /// NM_207292 /// NM_207293 /// NM_207294 /// NM_207295 /// NM_207296 /// NM_207297 /// XM_005247457 /// XM_005247458 /// XM_005247459 /// XM_005247460 /// XM_005247461 /// XM_005247462 /// XM_005247463 /// XM_005247464 /// XM_005247465 /// XM_005247466 /// XM_005247467 /// XM_005247468 /// XM_005247469 /// XM_005247470 /// XM_005247471 /// XM_005247472 /// XM_005247473 /// XM_005247474 /// XM_005247475 /// XM_005247476 /// XM_005247477 /// XM_006713639 /// XM_006713640 /// XM_006713641 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007399 // nervous system development // inferred from sequence or structural similarity /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0030326 // embryonic limb morphogenesis // inferred from sequence or structural similarity /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0045445 // myoblast differentiation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 98.95 </td> <td> 783.73 </td> <td> 1.41 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200904_at </td> <td> 200904_at </td> <td> X56841 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X56841.1 /DEF=H.sapiens HLA-E gene. /FEA=mRNA /GEN=HLA-E /PROD=HLA-E /DB_XREF=gi:433491 /UG=Hs.181392 major histocompatibility complex, class I, E /FL=gb:BC002578.1 gb:NM_005516.1 </td> <td> X56841 </td> <td> major histocompatibility complex, class I, E </td> <td> HLA-E </td> <td> 3133 </td> <td> NM_005516 </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002476 // antigen processing and presentation of endogenous peptide antigen via MHC class Ib // inferred from direct assay /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0002717 // positive regulation of natural killer cell mediated immunity // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042270 // protection from natural killer cell mediated cytotoxicity // inferred from direct assay /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005102 // receptor binding // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0042288 // MHC class I protein binding // inferred from direct assay /// 0042605 // peptide antigen binding // not recorded /// 0042605 // peptide antigen binding // inferred from direct assay </td> <td> 33.38 </td> <td> 146.19 </td> <td> 1.41 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201029_s_at </td> <td> 201029_s_at </td> <td> NM_002414 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002414.1 /DEF=Homo sapiens antigen identified by monoclonal antibodies 12E7, F21 and O13 (MIC2), mRNA.  /FEA=mRNA /GEN=MIC2 /PROD=antigen identified by monoclonal antibodies12E7, F21 and O13 /DB_XREF=gi:4505182 /UG=Hs.177543 antigen identified by monoclonal antibodies 12E7, F21 and O13 /FL=gb:BC002584.1 gb:BC003147.1 gb:M16279.1 gb:U82164.1 gb:NM_002414.1 </td> <td> NM_002414 </td> <td> CD99 molecule </td> <td> CD99 </td> <td> 4267 </td> <td> NM_001122898 /// NM_001277710 /// NM_002414 /// XM_005274530 /// XM_005274532 /// XM_005274533 /// XM_005274534 /// XM_005274535 /// XM_005274794 /// XM_005274796 /// XM_005274797 /// XM_005274798 /// XM_005274799 /// XM_006724489 /// XM_006724490 /// XM_006724491 /// XM_006724870 /// XM_006724871 /// XM_006724872 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -73.78 </td> <td> 1572.11 </td> <td> -1.41 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203224_at </td> <td> 203224_at </td> <td> BF340123 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF340123 /FEA=EST /DB_XREF=gi:11286585 /DB_XREF=est:602037283F1 /CLONE=IMAGE:4185212 /UG=Hs.37558 hypothetical protein FLJ11149 /FL=gb:NM_018339.1 </td> <td> BF340123 </td> <td> riboflavin kinase </td> <td> RFK </td> <td> 55312 </td> <td> NM_018339 </td> <td> 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006771 // riboflavin metabolic process // traceable author statement /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0009231 // riboflavin biosynthetic process // non-traceable author statement /// 0009398 // FMN biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0033864 // positive regulation of NAD(P)H oxidase activity // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008531 // riboflavin kinase activity // non-traceable author statement /// 0008531 // riboflavin kinase activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 19.90 </td> <td> 129.50 </td> <td> 1.41 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203325_s_at </td> <td> 203325_s_at </td> <td> AI130969 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI130969 /FEA=EST /DB_XREF=gi:3600985 /DB_XREF=est:qc15e01.x1 /CLONE=IMAGE:1709688 /UG=Hs.146428 collagen, type V, alpha 1 /FL=gb:M76729.1 gb:D90279.1 gb:NM_000093.1 </td> <td> AI130969 </td> <td> collagen, type V, alpha 1 </td> <td> COL5A1 </td> <td> 1289 </td> <td> NM_000093 /// NM_001278074 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030199 // collagen fibril organization // inferred from mutant phenotype /// 0030199 // collagen fibril organization // non-traceable author statement /// 0030574 // collagen catabolic process // traceable author statement /// 0032964 // collagen biosynthetic process // inferred from mutant phenotype /// 0035313 // wound healing, spreading of epidermal cells // inferred from mutant phenotype /// 0035989 // tendon development // inferred from electronic annotation /// 0043206 // extracellular fibril organization // inferred from mutant phenotype /// 0043588 // skin development // inferred from mutant phenotype /// 0045112 // integrin biosynthetic process // inferred from mutant phenotype /// 0048592 // eye morphogenesis // inferred from mutant phenotype /// 0051128 // regulation of cellular component organization // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005588 // collagen type V trimer // inferred from mutant phenotype /// 0005604 // basement membrane // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from mutant phenotype /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005178 // integrin binding // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0043394 // proteoglycan binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048407 // platelet-derived growth factor binding // inferred from direct assay </td> <td> -28.95 </td> <td> 222.60 </td> <td> -1.41 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 219599_at </td> <td> 219599_at </td> <td> NM_018507 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018507.1 /DEF=Homo sapiens hypothetical protein PRO1843 (PRO1843), mRNA. /FEA=mRNA /GEN=PRO1843 /PROD=hypothetical protein PRO1843 /DB_XREF=gi:8924082 /UG=Hs.283330 hypothetical protein PRO1843 /FL=gb:AF119854.1 gb:NM_018507.1 </td> <td> NM_018507 </td> <td> eukaryotic translation initiation factor 4B </td> <td> EIF4B </td> <td> 1975 </td> <td> NM_001417 /// NM_018507 /// XM_005268709 /// XM_006719274 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -48.25 </td> <td> 194.35 </td> <td> -1.41 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 208445_s_at </td> <td> 208445_s_at </td> <td> NM_023005 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_023005.1 /DEF=Homo sapiens bromodomain adjacent to zinc finger domain, 1B (BAZ1B), mRNA.  /FEA=mRNA /GEN=BAZ1B /PROD=bromodomain adjacent to zinc finger domain, 1B /DB_XREF=gi:12711667 /UG=Hs.194688 bromodomain adjacent to zinc finger domain, 1B /FL=gb:NM_023005.1 gb:AF072810.1 </td> <td> NM_023005 </td> <td> bromodomain adjacent to zinc finger domain, 1B </td> <td> BAZ1B </td> <td> 9031 </td> <td> NM_023005 /// NM_032408 /// XM_005250683 </td> <td> 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0006302 // double-strand break repair // inferred from sequence or structural similarity /// 0006333 // chromatin assembly or disassembly // inferred from electronic annotation /// 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // non-traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016572 // histone phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0034725 // DNA replication-dependent nucleosome disassembly // inferred from mutant phenotype /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0048096 // chromatin-mediated maintenance of transcription // inferred from sequence or structural similarity /// 2000273 // positive regulation of receptor activity // inferred from electronic annotation </td> <td> 0000793 // condensed chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from electronic annotation /// 0043596 // nuclear replication fork // inferred from direct assay /// 0071778 // WINAC complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from direct assay /// 0035173 // histone kinase activity // inferred from direct assay /// 0042393 // histone binding // inferred from electronic annotation /// 0042809 // vitamin D receptor binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070577 // lysine-acetylated histone binding // inferred from direct assay /// 0071884 // vitamin D receptor activator activity // inferred from electronic annotation </td> <td> 27.82 </td> <td> 98.36 </td> <td> 1.41 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 202678_at </td> <td> 202678_at </td> <td> NM_004492 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004492.1 /DEF=Homo sapiens general transcription factor IIA, 2 (12kD subunit) (GTF2A2), mRNA.  /FEA=mRNA /GEN=GTF2A2 /PROD=general transcription factor IIA, 2 (12kDsubunit) /DB_XREF=gi:4758485 /UG=Hs.76362 general transcription factor IIA, 2 (12kD subunit) /FL=gb:BC000287.1 gb:BC001919.1 gb:U21242.1 gb:NM_004492.1 gb:U14193.1 </td> <td> NM_004492 </td> <td> general transcription factor IIA, 2, 12kDa </td> <td> GTF2A2 </td> <td> 2958 </td> <td> NM_004492 /// XM_005254324 /// XM_005254325 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051123 // RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005672 // transcription factor TFIIA complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay </td> <td> 0001103 // RNA polymerase II repressing transcription factor binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0017025 // TBP-class protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> 44.20 </td> <td> 393.43 </td> <td> 1.41 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203952_at </td> <td> 203952_at </td> <td> NM_007348 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007348.1 /DEF=Homo sapiens activating transcription factor 6 (ATF6), mRNA. /FEA=mRNA /GEN=ATF6 /PROD=activating transcription factor 6 /DB_XREF=gi:6671584 /UG=Hs.247433 activating transcription factor 6 /FL=gb:AF005887.1 gb:AB015856.1 gb:NM_007348.1 </td> <td> NM_007348 </td> <td> activating transcription factor 6 </td> <td> ATF6 </td> <td> 22926 </td> <td> NM_007348 /// XM_006711224 /// XM_006711225 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006990 // positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -66.77 </td> <td> 148.89 </td> <td> -1.40 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201351_s_at </td> <td> 201351_s_at </td> <td> AF070656 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF070656.1 /DEF=Homo sapiens FtsH homolog mRNA, complete cds. /FEA=mRNA /PROD=FtsH homolog /DB_XREF=gi:4454687 /UG=Hs.206521 YME1 (S.cerevisiae)-like 1 /FL=gb:AF070656.1 gb:NM_014263.1 </td> <td> AF070656 </td> <td> YME1-like 1 ATPase </td> <td> YME1L1 </td> <td> 10730 </td> <td> NM_001253866 /// NM_014263 /// NM_139312 /// NM_139313 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -51.50 </td> <td> 543.02 </td> <td> -1.40 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 204640_s_at </td> <td> 204640_s_at </td> <td> NM_003563 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003563.1 /DEF=Homo sapiens speckle-type POZ protein (SPOP), mRNA. /FEA=mRNA /GEN=SPOP /PROD=speckle-type POZ protein /DB_XREF=gi:4507182 /UG=Hs.129951 speckle-type POZ protein /FL=gb:BC003385.1 gb:NM_003563.1 </td> <td> NM_003563 </td> <td> speckle-type POZ protein </td> <td> SPOP </td> <td> 8405 </td> <td> NM_001007226 /// NM_001007227 /// NM_001007228 /// NM_001007229 /// NM_001007230 /// NM_003563 /// XM_005257723 /// XM_005257724 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> -25.80 </td> <td> 240.68 </td> <td> -1.40 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 208978_at </td> <td> 208978_at </td> <td> U36190 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U36190.1 /DEF=Human cysteine-rich protein 2 (hCRP2) mRNA, complete cds. /FEA=mRNA /GEN=hCRP2 /PROD=cysteine-rich protein 2 /DB_XREF=gi:1399027 /UG=Hs.70327 cysteine-rich protein 2 /FL=gb:D42123.1 gb:BC000434.1 gb:BC001931.1 gb:U36190.1 gb:NM_001312.1 </td> <td> U36190 </td> <td> cysteine-rich protein 2 </td> <td> CRIP2 </td> <td> 1397 </td> <td> NM_001270837 /// NM_001270841 /// NM_001312 /// NR_073081 /// NR_073082 /// NR_073083 /// NR_073084 /// NR_073085 /// XR_429291 </td> <td> 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation </td> <td> 0005938 // cell cortex // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -49.25 </td> <td> 484.68 </td> <td> -1.40 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203675_at </td> <td> 203675_at </td> <td> NM_005013 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005013.1 /DEF=Homo sapiens nucleobindin 2 (NUCB2), mRNA. /FEA=mRNA /GEN=NUCB2 /PROD=nucleobindin 2 /DB_XREF=gi:4826869 /UG=Hs.3164 nucleobindin 2 /FL=gb:AF052642.1 gb:AF052643.1 gb:AF052644.1 gb:NM_005013.1 </td> <td> NM_005013 </td> <td> nucleobindin 2 </td> <td> NUCB2 </td> <td> 4925 </td> <td> NM_005013 /// XM_005252941 /// XM_005252942 /// XM_005252943 /// XM_005252944 /// XM_005252945 /// XM_005252947 /// XM_005252948 /// XM_006718239 </td> <td>  </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 21.20 </td> <td> 135.12 </td> <td> 1.40 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 206302_s_at </td> <td> 206302_s_at </td> <td> NM_019094 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019094.1 /DEF=Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 4 (NUDT4), mRNA.  /FEA=mRNA /GEN=NUDT4 /PROD=nudix (nucleoside diphosphate linked moietyX)-type motif 4 /DB_XREF=gi:10800135 /UG=Hs.92381 nudix (nucleoside diphosphate linked moiety X)-type motif 4 /FL=gb:NM_019094.1 gb:AF191649.1 gb:AF191650.1 gb:AF191653.1 </td> <td> NM_019094 </td> <td> nudix (nucleoside diphosphate linked moiety X)-type motif 4 /// nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1 /// nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 2 </td> <td> NUDT4 /// NUDT4P1 /// NUDT4P2 </td> <td> 11163 /// 170688 /// 440672 </td> <td> NM_019094 /// NM_199040 /// NR_002212 /// NR_104005 /// XM_005268595 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0009187 // cyclic nucleotide metabolic process // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0019935 // cyclic-nucleotide-mediated signaling // traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046831 // regulation of RNA export from nucleus // traceable author statement /// 0046907 // intracellular transport // traceable author statement </td> <td> 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030515 // snoRNA binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050072 // m7G(5')pppN diphosphatase activity // inferred from sequence or structural similarity /// 0052840 // inositol diphosphate tetrakisphosphate diphosphatase activity // traceable author statement /// 0052841 // inositol bisdiphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052842 // inositol diphosphate pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052843 // inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052844 // inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052845 // inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052846 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity // inferred from electronic annotation /// 0052847 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation /// 0052848 // inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation </td> <td> 51.25 </td> <td> 459.55 </td> <td> 1.40 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 202411_at </td> <td> 202411_at </td> <td> NM_005532 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005532.1 /DEF=Homo sapiens interferon, alpha-inducible protein 27 (IFI27), mRNA. /FEA=mRNA /GEN=IFI27 /PROD=interferon, alpha-inducible protein 27 /DB_XREF=gi:5031780 /UG=Hs.278613 interferon, alpha-inducible protein 27 /FL=gb:NM_005532.1 </td> <td> NM_005532 </td> <td> interferon, alpha-inducible protein 27 </td> <td> IFI27 </td> <td> 3429 </td> <td> NM_001130080 /// NM_001288952 /// NM_001288954 /// NM_001288956 /// NM_001288957 /// NM_001288958 /// NM_001288959 /// NM_001288960 /// NM_001288995 /// NM_005532 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0097190 // apoptotic signaling pathway // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -79.05 </td> <td> 428.68 </td> <td> -1.40 </td> <td> 0.20 </td> <td> 0.27 </td> <td> -4.58 </td> </tr>
  <tr> <td> 215918_s_at </td> <td> 215918_s_at </td> <td> AA131826 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA131826 /FEA=EST /DB_XREF=gi:1693379 /DB_XREF=est:zl37f06.s1 /CLONE=IMAGE:504131 /UG=Hs.107164 spectrin, beta, non-erythrocytic 1 </td> <td> AA131826 </td> <td> spectrin, beta, non-erythrocytic 1 </td> <td> SPTBN1 </td> <td> 6711 </td> <td> NM_003128 /// NM_178313 /// XM_005264517 /// XM_005264518 /// XM_006712087 </td> <td> 0000281 // mitotic cytokinesis // inferred from mutant phenotype /// 0007009 // plasma membrane organization // inferred from mutant phenotype /// 0007182 // common-partner SMAD protein phosphorylation // inferred from electronic annotation /// 0007184 // SMAD protein import into nucleus // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0043001 // Golgi to plasma membrane protein transport // inferred from mutant phenotype /// 0051693 // actin filament capping // inferred from electronic annotation /// 0071709 // membrane assembly // inferred from mutant phenotype /// 0072661 // protein targeting to plasma membrane // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008091 // spectrin // inferred from electronic annotation /// 0014731 // spectrin-associated cytoskeleton // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030673 // axolemma // inferred from sequence or structural similarity /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031430 // M band // inferred from electronic annotation /// 0032437 // cuticular plate // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction /// 0030506 // ankyrin binding // non-traceable author statement /// 0032403 // protein complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 17.85 </td> <td> 35.67 </td> <td> 1.40 </td> <td> 0.20 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 218753_at </td> <td> 218753_at </td> <td> NM_018053 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018053.1 /DEF=Homo sapiens hypothetical protein FLJ10307 (FLJ10307), mRNA. /FEA=mRNA /GEN=FLJ10307 /PROD=hypothetical protein FLJ10307 /DB_XREF=gi:8922341 /UG=Hs.55024 hypothetical protein FLJ10307 /FL=gb:BC003606.1 gb:NM_018053.1 </td> <td> NM_018053 </td> <td> XK, Kell blood group complex subunit-related family, member 8 </td> <td> XKR8 </td> <td> 55113 </td> <td> NM_018053 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0043652 // engulfment of apoptotic cell // inferred from direct assay /// 0070782 // phosphatidylserine exposure on apoptotic cell surface // inferred from direct assay </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -39.38 </td> <td> 287.49 </td> <td> -1.40 </td> <td> 0.20 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 206074_s_at </td> <td> 206074_s_at </td> <td> NM_002131 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002131.1 /DEF=Homo sapiens high-mobility group (nonhistone chromosomal) protein isoforms I and Y (HMGIY), mRNA.  /FEA=mRNA /GEN=HMGIY /PROD=high-mobility group (nonhistone chromosomal)protein isoforms I and Y /DB_XREF=gi:4504432 /UG=Hs.139800 high-mobility group (nonhistone chromosomal) protein isoforms I and Y /FL=gb:BC004924.1 gb:NM_002131.1 </td> <td> NM_002131 </td> <td> high mobility group AT-hook 1 </td> <td> HMGA1 </td> <td> 3159 </td> <td> NM_002131 /// NM_145899 /// NM_145901 /// NM_145902 /// NM_145903 /// NM_145904 /// NM_145905 /// XM_005249061 </td> <td> 0000737 // DNA catabolic process, endonucleolytic // inferred from direct assay /// 0006268 // DNA unwinding involved in DNA replication // non-traceable author statement /// 0006284 // base-excision repair // inferred from direct assay /// 0006337 // nucleosome disassembly // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0009615 // response to virus // inferred from expression pattern /// 0016032 // viral process // traceable author statement /// 0031936 // negative regulation of chromatin silencing // traceable author statement /// 0035986 // senescence-associated heterochromatin focus assembly // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0075713 // establishment of integrated proviral latency // traceable author statement /// 0090402 // oncogene-induced cell senescence // inferred from direct assay /// 2000774 // positive regulation of cellular senescence // inferred from mutant phenotype </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0035985 // senescence-associated heterochromatin focus // inferred from direct assay </td> <td> 0003677 // DNA binding // traceable author statement /// 0003680 // AT DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0042974 // retinoic acid receptor binding // inferred from direct assay /// 0042975 // peroxisome proliferator activated receptor binding // inferred from direct assay /// 0046965 // retinoid X receptor binding // inferred from direct assay /// 0051575 // 5'-deoxyribose-5-phosphate lyase activity // inferred from direct assay </td> <td> 116.82 </td> <td> 964.39 </td> <td> 1.39 </td> <td> 0.20 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 211946_s_at </td> <td> 211946_s_at </td> <td> AL096857 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL096857.1 /DEF=Novel human mRNA from chromosome 1, which has similarities to BAT2 genes.  /FEA=mRNA /PROD=hypothetical protein /DB_XREF=gi:5541862 /UG=Hs.69559 KIAA1096 protein </td> <td> AL096857 </td> <td> proline-rich coiled-coil 2C </td> <td> PRRC2C </td> <td> 23215 </td> <td> NM_015172 /// XM_005245015 /// XM_005245016 /// XM_005245017 /// XM_005245018 /// XM_005245019 /// XM_005245020 /// XM_005245022 /// XM_005245023 /// XM_005245024 /// XM_005245025 /// XM_005245026 /// XM_005245027 /// XM_005245028 /// XM_005245029 /// XM_005245030 /// XM_006711238 /// XM_006711239 </td> <td>  </td> <td> 0016020 // membrane // inferred from direct assay </td> <td> 0008022 // protein C-terminus binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 46.10 </td> <td> 524.65 </td> <td> 1.39 </td> <td> 0.20 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 210875_s_at </td> <td> 210875_s_at </td> <td> U12170 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U12170.1 /DEF=Human zinc finger homeodomain protein mRNA, complete cds. /FEA=mRNA /PROD=zinc finger homeodomain protein /DB_XREF=gi:529172 /UG=Hs.232068 transcription factor 8 (represses interleukin 2 expression) /FL=gb:U12170.1 </td> <td> U12170 </td> <td> uncharacterized LOC100996668 /// zinc finger E-box binding homeobox 1 </td> <td> LOC100996668 /// ZEB1 </td> <td> 6935 /// 100996668 </td> <td> NM_001128128 /// NM_001174093 /// NM_001174094 /// NM_001174095 /// NM_001174096 /// NM_030751 /// NR_024285 /// NR_024286 /// NR_024287 /// XM_005252575 /// XM_005252576 /// XM_006717497 /// XM_006717498 /// XM_006717499 /// XR_158862 /// XR_159196 /// XR_171848 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010464 // regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0033081 // regulation of T cell differentiation in thymus // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048513 // organ development // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048752 // semicircular canal morphogenesis // inferred from electronic annotation /// 0051150 // regulation of smooth muscle cell differentiation // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070888 // E-box binding // inferred from sequence or structural similarity </td> <td> 61.73 </td> <td> 166.29 </td> <td> 1.39 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 213939_s_at </td> <td> 213939_s_at </td> <td> AI871641 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI871641 /FEA=EST /DB_XREF=gi:5545690 /DB_XREF=est:we28f04.x1 /CLONE=IMAGE:2342431 /UG=Hs.306623 Homo sapiens cDNA FLJ12012 fis, clone HEMBB1001668 </td> <td> AI871641 </td> <td> RUN and FYVE domain containing 3 </td> <td> RUFY3 </td> <td> 22902 </td> <td> NM_001037442 /// NM_001130709 /// NM_001291993 /// NM_001291994 /// NM_014961 /// XM_005265656 /// XM_005265657 /// XM_005265658 /// XM_005265659 /// XM_006714148 /// XM_006714149 /// XM_006714150 /// XR_427534 /// XR_427535 /// XR_427536 /// XR_427537 /// XR_427538 /// XR_427539 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from sequence or structural similarity </td> <td> 0030175 // filopodium // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation </td> <td>  </td> <td> 18.35 </td> <td> 27.12 </td> <td> 1.39 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 213318_s_at </td> <td> 213318_s_at </td> <td> BG028844 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG028844 /FEA=EST /DB_XREF=gi:12417939 /DB_XREF=est:602292337F1 /CLONE=IMAGE:4387280 /UG=Hs.274348 HLA-B associated transcript-3 </td> <td> BG028844 </td> <td> BCL2-associated athanogene 6 </td> <td> BAG6 </td> <td> 7917 </td> <td> NM_001098534 /// NM_001199697 /// NM_001199698 /// NM_004639 /// NM_080702 /// NM_080703 /// XM_005249393 /// XM_005249396 /// XM_005272880 /// XM_005272883 /// XM_005275034 /// XM_005275037 /// XM_005275169 /// XM_005275172 /// XM_005275292 /// XM_005275295 /// XM_005275464 /// XM_005275468 /// XM_005275597 /// XM_005275601 /// XM_006715192 /// XM_006715193 /// XM_006715194 /// XM_006715195 /// XM_006715196 /// XM_006715197 /// XM_006715198 /// XM_006715199 /// XM_006715200 /// XM_006715201 /// XM_006715202 /// XM_006715203 /// XM_006725509 /// XM_006725510 /// XM_006725511 /// XM_006725512 /// XM_006725513 /// XM_006725514 /// XM_006725515 /// XM_006725516 /// XM_006725517 /// XM_006725518 /// XM_006725519 /// XM_006725520 /// XM_006725725 /// XM_006725726 /// XM_006725727 /// XM_006725728 /// XM_006725729 /// XM_006725730 /// XM_006725731 /// XM_006725732 /// XM_006725733 /// XM_006725734 /// XM_006725735 /// XM_006725736 /// XM_006725835 /// XM_006725836 /// XM_006725837 /// XM_006725838 /// XM_006725839 /// XM_006725840 /// XM_006725841 /// XM_006725842 /// XM_006725843 /// XM_006725844 /// XM_006725845 /// XM_006725846 /// XM_006725923 /// XM_006725924 /// XM_006725925 /// XM_006725926 /// XM_006725927 /// XM_006725928 /// XM_006725929 /// XM_006725930 /// XM_006725931 /// XM_006725932 /// XM_006725933 /// XM_006725934 /// XM_006726025 /// XM_006726026 /// XM_006726027 /// XM_006726028 /// XM_006726029 /// XM_006726030 /// XM_006726031 /// XM_006726032 /// XM_006726033 /// XM_006726034 /// XM_006726035 /// XM_006726036 /// XM_006726113 /// XM_006726114 /// XM_006726115 /// XM_006726116 /// XM_006726117 /// XM_006726118 /// XM_006726119 /// XM_006726120 /// XM_006726121 /// XM_006726122 /// XM_006726123 /// XM_006726124 </td> <td> 0001822 // kidney development // inferred from sequence or structural similarity /// 0002376 // immune system process // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007130 // synaptonemal complex assembly // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0016568 // chromatin modification // inferred from electronic annotation /// 0018393 // internal peptidyl-lysine acetylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from sequence or structural similarity /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from mutant phenotype /// 0045861 // negative regulation of proteolysis // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0071818 // BAT3 complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030544 // Hsp70 protein binding // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from sequence or structural similarity /// 0043022 // ribosome binding // inferred from direct assay /// 0070628 // proteasome binding // inferred from sequence or structural similarity </td> <td> -60.82 </td> <td> 435.26 </td> <td> -1.39 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 213047_x_at </td> <td> 213047_x_at </td> <td> AI278616 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI278616 /FEA=EST /DB_XREF=gi:3916850 /DB_XREF=est:qm47a06.x1 /CLONE=IMAGE:1891858 /UG=Hs.145279 SET translocation (myeloid leukemia-associated) </td> <td> AI278616 </td> <td> SET nuclear proto-oncogene /// SET-like protein </td> <td> SET /// SETSIP </td> <td> 6418 /// 646817 </td> <td> NM_001122821 /// NM_001248000 /// NM_001248001 /// NM_001287737 /// NM_003011 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006337 // nucleosome disassembly // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0035067 // negative regulation of histone acetylation // traceable author statement /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0045446 // endothelial cell differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050790 // regulation of catalytic activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004864 // protein phosphatase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0042393 // histone binding // traceable author statement </td> <td> 85.12 </td> <td> 887.36 </td> <td> 1.39 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200049_at </td> <td> 200049_at </td> <td> NM_007067 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007067.1 /DEF=Homo sapiens histone acetyltransferase (HBOA), mRNA. /FEA=mRNA /GEN=HBOA /PROD=histone acetyltransferase /DB_XREF=gi:5901961 /UG=Hs.21907 histone acetyltransferase /FL=gb:AF074606.1 gb:AF140360.1 gb:NM_007067.1 </td> <td> NM_007067 </td> <td> K(lysine) acetyltransferase 7 </td> <td> KAT7 </td> <td> 11143 </td> <td> NM_001199155 /// NM_001199156 /// NM_001199157 /// NM_001199158 /// NM_007067 </td> <td> 0006260 // DNA replication // inferred from direct assay /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043983 // histone H4-K12 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay </td> <td> 0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -18.95 </td> <td> 140.82 </td> <td> -1.39 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 214327_x_at </td> <td> 214327_x_at </td> <td> AI888178 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI888178 /FEA=EST /DB_XREF=gi:5593342 /DB_XREF=est:wm40b09.x1 /CLONE=IMAGE:2438393 /UG=Hs.279860 tumor protein, translationally-controlled 1 </td> <td> AI888178 </td> <td> uncharacterized LOC101928826 /// tumor protein, translationally-controlled 1 </td> <td> LOC101928826 /// TPT1 </td> <td> 7178 /// 101928826 </td> <td> NM_001286272 /// NM_001286273 /// NM_003295 /// XR_242670 /// XR_250536 /// XR_252641 </td> <td> 0006816 // calcium ion transport // inferred by curator /// 0006874 // cellular calcium ion homeostasis // inferred by curator /// 0009615 // response to virus // inferred from expression pattern /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 1902230 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage // inferred from mutant phenotype /// 2000384 // negative regulation of ectoderm development // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005771 // multivesicular body // inferred from direct assay /// 0045298 // tubulin complex // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 488.15 </td> <td> 2603.35 </td> <td> 1.38 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203008_x_at </td> <td> 203008_x_at </td> <td> NM_005783 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005783.1 /DEF=Homo sapiens ATP binding protein associated with cell differentiation (APACD), mRNA.  /FEA=mRNA /GEN=APACD /PROD=ATP binding protein associated with celldifferentiation /DB_XREF=gi:5031582 /UG=Hs.153884 ATP binding protein associated with cell differentiation /FL=gb:AB006679.1 gb:NM_005783.1 </td> <td> NM_005783 </td> <td> thioredoxin domain containing 9 </td> <td> TXNDC9 </td> <td> 10190 </td> <td> NM_005783 </td> <td> 0045454 // cell redox homeostasis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 72.85 </td> <td> 498.52 </td> <td> 1.38 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 211944_at </td> <td> 211944_at </td> <td> BE729523 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE729523 /FEA=EST /DB_XREF=gi:10143515 /DB_XREF=est:601564896F1 /CLONE=IMAGE:3926279 /UG=Hs.69559 KIAA1096 protein </td> <td> BE729523 </td> <td> proline-rich coiled-coil 2C </td> <td> PRRC2C </td> <td> 23215 </td> <td> NM_015172 /// XM_005245015 /// XM_005245016 /// XM_005245017 /// XM_005245018 /// XM_005245019 /// XM_005245020 /// XM_005245022 /// XM_005245023 /// XM_005245024 /// XM_005245025 /// XM_005245026 /// XM_005245027 /// XM_005245028 /// XM_005245029 /// XM_005245030 /// XM_006711238 /// XM_006711239 </td> <td>  </td> <td> 0016020 // membrane // inferred from direct assay </td> <td> 0008022 // protein C-terminus binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -22.80 </td> <td> 100.05 </td> <td> -1.38 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 202728_s_at </td> <td> 202728_s_at </td> <td> AI986120 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI986120 /FEA=EST /DB_XREF=gi:5813397 /DB_XREF=est:wr80e09.x1 /CLONE=IMAGE:2494024 /UG=Hs.241257 latent transforming growth factor beta binding protein 1 /FL=gb:M34057.1 gb:NM_000627.1 </td> <td> AI986120 </td> <td> latent transforming growth factor beta binding protein 1 </td> <td> LTBP1 </td> <td> 4052 </td> <td> NM_000627 /// NM_001166264 /// NM_001166265 /// NM_001166266 /// NM_206943 /// XM_005264315 /// XM_005264316 /// XM_005264317 /// XM_005264318 /// XM_005264319 /// XM_006712019 </td> <td> 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // non-traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0035583 // sequestering of TGFbeta in extracellular matrix // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay </td> <td> 0005024 // transforming growth factor beta-activated receptor activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from electronic annotation /// 0050431 // transforming growth factor beta binding // inferred from physical interaction </td> <td> -28.70 </td> <td> 144.85 </td> <td> -1.38 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 221775_x_at </td> <td> 221775_x_at </td> <td> BG152979 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG152979 /FEA=EST /DB_XREF=gi:12665009 /DB_XREF=est:nah24c06.y1 /CLONE=IMAGE:4232050 /UG=Hs.99914 ribosomal protein L22 </td> <td> BG152979 </td> <td> ribosomal protein L22 </td> <td> RPL22 </td> <td> 6146 </td> <td> NM_000983 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -303.68 </td> <td> 2588.76 </td> <td> -1.38 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 214020_x_at </td> <td> 214020_x_at </td> <td> BE138575 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE138575 /FEA=EST /DB_XREF=gi:8601075 /DB_XREF=est:xr77e12.x2 /CLONE=IMAGE:2766190 /UG=Hs.149846 integrin, beta 5 </td> <td> BE138575 </td> <td> integrin, beta 5 </td> <td> ITGB5 </td> <td> 3693 </td> <td> NM_002213 /// XM_005247436 /// XM_006713630 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005925 // focal adhesion // inferred from electronic annotation /// 0008305 // integrin complex // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0045335 // phagocytic vesicle // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004872 // receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 44.60 </td> <td> 211.40 </td> <td> 1.38 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 211963_s_at </td> <td> 211963_s_at </td> <td> AL516350 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL516350 /FEA=EST /DB_XREF=gi:12779843 /DB_XREF=est:AL516350 /CLONE=CS0DA005YD24 (3 prime) /UG=Hs.82425 actin related protein 23 complex, subunit 5 (16 kD) /FL=gb:AF017807.1 </td> <td> AL516350 </td> <td> actin related protein 2/3 complex, subunit 5, 16kDa </td> <td> ARPC5 </td> <td> 10092 </td> <td> NM_001270439 /// NM_005717 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0030027 // lamellipodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 88.27 </td> <td> 965.79 </td> <td> 1.38 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 215452_x_at </td> <td> 215452_x_at </td> <td> AL031133 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL031133 /DEF=Human DNA sequence from clone 281H8 on chromosome 6q25.1-25.3. Contains up to four novel genes, one with similarity to KIAA0323 and worm C30F12.1 and another with Ubiquitin-Like protein gene SMT3 (the latter in an intron of a novel gene). Contains... /FEA=mRNA_2 /DB_XREF=gi:3676189 /UG=Hs.113293 Human DNA sequence from clone 281H8 on chromosome 6q25.1-25.3. Contains up to four novel genes, one with similarity to KIAA0323 and worm C30F12.1 and another with Ubiquitin-Like protein gene SMT3 (the latter in an intron of a novel gene). Contains ESTs, S </td> <td> AL031133 </td> <td> small ubiquitin-like modifier 4 </td> <td> SUMO4 </td> <td> 387082 </td> <td> NM_001002255 </td> <td> 0016925 // protein sumoylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 60.00 </td> <td> 242.35 </td> <td> 1.37 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 217771_at </td> <td> 217771_at </td> <td> NM_016548 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016548.1 /DEF=Homo sapiens golgi membrane protein GP73 (LOC51280), mRNA. /FEA=mRNA /GEN=LOC51280 /PROD=golgi membrane protein GP73 /DB_XREF=gi:7706084 /UG=Hs.182793 golgi membrane protein GP73 /FL=gb:BC001740.1 gb:AF236056.1 gb:NM_016548.1 </td> <td> NM_016548 </td> <td> golgi membrane protein 1 </td> <td> GOLM1 </td> <td> 51280 </td> <td> NM_001099268 /// NM_016548 /// NM_177937 </td> <td> 0006997 // nucleus organization // inferred from electronic annotation /// 0019216 // regulation of lipid metabolic process // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 31.45 </td> <td> 153.85 </td> <td> 1.37 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 212083_at </td> <td> 212083_at </td> <td> BG170659 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG170659 /FEA=EST /DB_XREF=gi:12677362 /DB_XREF=est:602323531F1 /CLONE=IMAGE:4426926 /UG=Hs.226138 Homo sapiens mRNA; cDNA DKFZp566H2446 (from clone DKFZp566H2446) </td> <td> BG170659 </td> <td> testis expressed 261 </td> <td> TEX261 </td> <td> 113419 </td> <td> NM_144582 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 32.02 </td> <td> 286.64 </td> <td> 1.37 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 204950_at </td> <td> 204950_at </td> <td> NM_014959 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014959.1 /DEF=Homo sapiens KIAA0955 protein (KIAA0955), mRNA. /FEA=mRNA /GEN=KIAA0955 /PROD=KIAA0955 protein /DB_XREF=gi:7662403 /UG=Hs.10031 KIAA0955 protein /FL=gb:AF322184.1 gb:AF331519.1 gb:AY026322.1 gb:AB023172.1 gb:NM_014959.1 </td> <td> NM_014959 </td> <td> caspase recruitment domain family, member 8 </td> <td> CARD8 </td> <td> 22900 </td> <td> NM_001184900 /// NM_001184901 /// NM_001184902 /// NM_001184903 /// NM_001184904 /// NM_014959 /// NR_033678 /// NR_033679 /// NR_033680 /// XM_006723091 /// XM_006723092 /// XM_006723093 /// XM_006723094 /// XM_006723095 /// XM_006723096 /// XM_006723097 /// XM_006723098 /// XM_006723099 /// XM_006723100 /// XM_006723101 /// XM_006723102 /// XM_006723103 /// XM_006723104 /// XM_006723105 /// XM_006723106 /// XM_006723107 /// XM_006723108 /// XM_006723109 /// XM_006723110 /// XR_430193 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0072559 // NLRP3 inflammasome complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from direct assay /// 0032089 // NACHT domain binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> 34.75 </td> <td> 231.95 </td> <td> 1.37 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 215338_s_at </td> <td> 215338_s_at </td> <td> AI688640 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI688640 /FEA=EST /DB_XREF=gi:4899934 /DB_XREF=est:wd40b07.x1 /CLONE=IMAGE:2330581 /UG=Hs.241493 natural killer-tumor recognition sequence </td> <td> AI688640 </td> <td> natural killer cell triggering receptor </td> <td> NKTR </td> <td> 4820 </td> <td> NM_001012651 /// NM_005385 /// XM_005265173 /// XM_005265174 /// XM_005265176 /// XM_005265178 /// XM_006713171 /// XM_006713172 /// XM_006713173 /// XM_006713174 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0016018 // cyclosporin A binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation </td> <td> 19.85 </td> <td> 74.70 </td> <td> 1.37 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203445_s_at </td> <td> 203445_s_at </td> <td> NM_005730 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005730.1 /DEF=Homo sapiens conserved gene amplified in osteosarcoma (OS4), mRNA. /FEA=mRNA /GEN=OS4 /PROD=conserved gene amplified in osteosarcoma /DB_XREF=gi:5031964 /UG=Hs.180669 conserved gene amplified in osteosarcoma /FL=gb:U81556.1 gb:NM_005730.1 </td> <td> NM_005730 </td> <td> CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 </td> <td> CTDSP2 </td> <td> 10106 </td> <td> NM_005730 /// XM_005268556 </td> <td> 0006470 // protein dephosphorylation // inferred from direct assay /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008420 // CTD phosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 32.62 </td> <td> 448.31 </td> <td> 1.37 </td> <td> 0.21 </td> <td> 0.28 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203011_at </td> <td> 203011_at </td> <td> NM_005536 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005536.2 /DEF=Homo sapiens inositol(myo)-1(or 4)-monophosphatase 1 (IMPA1), mRNA. /FEA=mRNA /GEN=IMPA1 /PROD=inositol(myo)-1(or 4)-monophosphatase 1 /DB_XREF=gi:8393607 /UG=Hs.171776 inositol(myo)-1(or 4)-monophosphatase 1 /FL=gb:AF042729.2 gb:NM_005536.2 </td> <td> NM_005536 </td> <td> inositol(myo)-1(or 4)-monophosphatase 1 </td> <td> IMPA1 </td> <td> 3612 </td> <td> NM_001144878 /// NM_001144879 /// NM_005536 </td> <td> 0006021 // inositol biosynthetic process // inferred from electronic annotation /// 0006661 // phosphatidylinositol biosynthetic process // inferred from mutant phenotype /// 0006796 // phosphate-containing compound metabolic process // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from mutant phenotype /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008934 // inositol monophosphate 1-phosphatase activity // inferred from direct assay /// 0008934 // inositol monophosphate 1-phosphatase activity // inferred from mutant phenotype /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052832 // inositol monophosphate 3-phosphatase activity // inferred from electronic annotation /// 0052833 // inositol monophosphate 4-phosphatase activity // inferred from electronic annotation /// 0052834 // inositol monophosphate phosphatase activity // inferred from electronic annotation </td> <td> 25.95 </td> <td> 231.70 </td> <td> 1.37 </td> <td> 0.21 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200021_at </td> <td> 200021_at </td> <td> NM_005507 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005507.1 /DEF=Homo sapiens cofilin 1 (non-muscle) (CFL1), mRNA. /FEA=mRNA /GEN=CFL1 /PROD=cofilin 1 (non-muscle) /DB_XREF=gi:5031634 /UG=Hs.180370 cofilin 1 (non-muscle) /FL=gb:NM_005507.1 </td> <td> NM_005507 </td> <td> cofilin 1 (non-muscle) </td> <td> CFL1 </td> <td> 1072 </td> <td> NM_005507 </td> <td> 0000910 // cytokinesis // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001842 // neural fold formation // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030042 // actin filament depolymerization // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030836 // positive regulation of actin filament depolymerization // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043200 // response to amino acid // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045792 // negative regulation of cell size // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -349.70 </td> <td> 4228.70 </td> <td> -1.36 </td> <td> 0.21 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 209971_x_at </td> <td> 209971_x_at </td> <td> AI928526 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI928526 /FEA=EST /DB_XREF=gi:5664490 /DB_XREF=est:wp59a06.x1 /CLONE=IMAGE:2466034 /UG=Hs.258730 heme-regulated initiation factor 2-alpha kinase /FL=gb:AF116615.1 </td> <td> AI928526 </td> <td> aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 </td> <td> AIMP2 </td> <td> 7965 </td> <td> NM_006303 /// XM_005249847 /// XM_005249848 /// XM_005249850 /// XM_006715772 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from expression pattern /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0010999 // regulation of eIF2 alpha phosphorylation by heme // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0045993 // negative regulation of translational initiation by iron // non-traceable author statement /// 0046501 // protoporphyrinogen IX metabolic process // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0046984 // regulation of hemoglobin biosynthetic process // inferred from electronic annotation /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from electronic annotation /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from sequence or structural similarity /// 0060510 // Type II pneumocyte differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity </td> <td> 27.40 </td> <td> 329.10 </td> <td> 1.36 </td> <td> 0.21 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200847_s_at </td> <td> 200847_s_at </td> <td> NM_016127 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016127.1 /DEF=Homo sapiens HSPC035 protein (LOC51669), mRNA. /FEA=mRNA /GEN=LOC51669 /PROD=HSPC035 protein /DB_XREF=gi:7706384 /UG=Hs.279921 HSPC035 protein /FL=gb:AF100748.1 gb:AF078855.1 gb:NM_016127.1 </td> <td> NM_016127 </td> <td> store-operated calcium entry-associated regulatory factor </td> <td> SARAF </td> <td> 51669 </td> <td> NM_001284239 /// NM_016127 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 2001256 // regulation of store-operated calcium entry // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015279 // store-operated calcium channel activity // inferred from direct assay </td> <td> -40.20 </td> <td> 414.38 </td> <td> -1.36 </td> <td> 0.21 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201302_at </td> <td> 201302_at </td> <td> NM_001153 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001153.2 /DEF=Homo sapiens annexin A4 (ANXA4), mRNA. /FEA=mRNA /GEN=ANXA4 /PROD=annexin IV /DB_XREF=gi:4809272 /UG=Hs.77840 annexin A4 /FL=gb:D78152.1 gb:BC000182.1 gb:M82809.1 gb:M19383.1 gb:NM_001153.2 </td> <td> NM_001153 </td> <td> annexin A4 </td> <td> ANXA4 </td> <td> 307 </td> <td> NM_001153 /// XM_006712000 </td> <td> 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043086 // negative regulation of catalytic activity // non-traceable author statement /// 0050819 // negative regulation of coagulation // inferred from electronic annotation /// 2000483 // negative regulation of interleukin-8 secretion // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0012506 // vesicle membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004859 // phospholipase inhibitor activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0005544 // calcium-dependent phospholipid binding // non-traceable author statement /// 0042802 // identical protein binding // inferred from physical interaction /// 0048306 // calcium-dependent protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from physical interaction </td> <td> 20.85 </td> <td> 220.90 </td> <td> 1.36 </td> <td> 0.21 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 218119_at </td> <td> 218119_at </td> <td> NM_006327 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006327.1 /DEF=Homo sapiens translocase of inner mitochondrial membrane 23 (yeast) homolog (TIM23), mRNA.  /FEA=mRNA /GEN=TIM23 /PROD=translocase of inner mitochondrial membrane 23(yeast) homolog /DB_XREF=gi:5454121 /UG=Hs.283684 translocase of inner mitochondrial membrane 23 (yeast) homolog /FL=gb:AF030162.1 gb:NM_006327.1 </td> <td> NM_006327 </td> <td> translocase of inner mitochondrial membrane 23 homolog (yeast) /// translocase of inner mitochondrial membrane 23 homolog B (yeast) </td> <td> TIMM23 /// TIMM23B </td> <td> 100287932 /// 100652748 </td> <td> NM_001290117 /// NM_001290118 /// NM_006327 /// NR_073029 /// NR_073030 /// NR_110767 /// XM_005278340 /// XM_006710232 /// XM_006718099 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0071806 // protein transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from direct assay /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031305 // integral component of mitochondrial inner membrane // inferred from direct assay </td> <td> 0004649 // poly(ADP-ribose) glycohydrolase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -33.35 </td> <td> 231.95 </td> <td> -1.36 </td> <td> 0.21 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 211999_at </td> <td> 211999_at </td> <td> Z48950 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:Z48950 /DEF=H.sapiens hH3.3B gene for histone H3.3 /FEA=mRNA /DB_XREF=gi:761715 /UG=Hs.180877 H3 histone, family 3B (H3.3B) /FL=gb:NM_005324.1 </td> <td> Z48950 </td> <td> H3 histone, family 3A /// H3 histone, family 3B (H3.3B) /// microRNA 4738 </td> <td> H3F3A /// H3F3B /// MIR4738 </td> <td> 3020 /// 3021 /// 100616282 </td> <td> NM_002107 /// NM_005324 /// NR_039892 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype </td> <td> 0000228 // nuclear chromosome // inferred from direct assay /// 0000786 // nucleosome // inferred from electronic annotation /// 0000788 // nuclear nucleosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -70.75 </td> <td> 1239.67 </td> <td> -1.36 </td> <td> 0.21 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201966_at </td> <td> 201966_at </td> <td> NM_004550 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004550.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) Fe-S protein 2 (49kD) (NADH-coenzyme Q reductase) (NDUFS2), mRNA.  /FEA=mRNA /GEN=NDUFS2 /PROD=NADH dehydrogenase (ubiquinone) Fe-S protein 2(49kD) (NADH-coenzyme Q reductase) /DB_XREF=gi:4758785 /UG=Hs.173611 NADH dehydrogenase (ubiquinone) Fe-S protein 2 (49kD) (NADH-coenzyme Q reductase) /FL=gb:BC001456.1 gb:BC000170.2 gb:AF050640.1 gb:AF013160.1 gb:NM_004550.1 </td> <td> NM_004550 </td> <td> NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase) </td> <td> NDUFS2 </td> <td> 4720 </td> <td> NM_001166159 /// NM_004550 /// XM_005245208 /// XM_005245209 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006979 // response to oxidative stress // inferred from direct assay /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // inferred from mutant phenotype /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0003954 // NADH dehydrogenase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0009055 // electron carrier activity // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016651 // oxidoreductase activity, acting on NAD(P)H // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048038 // quinone binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation </td> <td> 22.35 </td> <td> 490.23 </td> <td> 1.36 </td> <td> 0.21 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203781_at </td> <td> 203781_at </td> <td> NM_004891 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004891.1 /DEF=Homo sapiens chromosome 2 open reading frame 1 (C2ORF1), mRNA. /FEA=mRNA /GEN=C2ORF1 /PROD=chromosome 2 open reading frame 1 /DB_XREF=gi:4759047 /UG=Hs.14454 chromosome 2 open reading frame 1 /FL=gb:AF047440.1 gb:NM_004891.1 </td> <td> NM_004891 </td> <td> mitochondrial ribosomal protein L33 </td> <td> MRPL33 </td> <td> 9553 </td> <td> NM_004891 /// NM_145330 </td> <td> 0006412 // translation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation </td> <td> 125.05 </td> <td> 392.68 </td> <td> 1.36 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 212165_at </td> <td> 212165_at </td> <td> AF070537 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF070537.1 /DEF=Homo sapiens clone 24606 mRNA sequence. /FEA=mRNA /DB_XREF=gi:3387894 /UG=Hs.17481 Homo sapiens clone 24606 mRNA sequence </td> <td> AF070537 </td> <td> transmembrane protein 183A /// transmembrane protein 183B </td> <td> TMEM183A /// TMEM183B </td> <td> 92703 /// 653659 </td> <td> NM_001079809 /// NM_138391 /// XM_005245612 /// XR_241106 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 27.40 </td> <td> 164.57 </td> <td> 1.36 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 207785_s_at </td> <td> 207785_s_at </td> <td> NM_015874 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015874.1 /DEF=Homo sapiens H-2K binding factor-2 (LOC51580), mRNA. /FEA=mRNA /GEN=LOC51580 /PROD=H-2K binding factor-2 /DB_XREF=gi:7706215 /UG=Hs.327138 H-2K binding factor-2 /FL=gb:D14041.1 gb:NM_015874.1 </td> <td> NM_015874 </td> <td> recombination signal binding protein for immunoglobulin kappa J region </td> <td> RBPJ </td> <td> 3516 </td> <td> NM_005349 /// NM_015874 /// NM_203283 /// NM_203284 /// XM_005248161 /// XM_006713962 /// XM_006713963 /// XM_006713964 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001837 // epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002437 // inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003157 // endocardium development // inferred from electronic annotation /// 0003160 // endocardium morphogenesis // inferred from sequence or structural similarity /// 0003198 // epithelial to mesenchymal transition involved in endocardial cushion formation // inferred from sequence or structural similarity /// 0003214 // cardiac left ventricle morphogenesis // inferred from sequence or structural similarity /// 0003222 // ventricular trabecula myocardium morphogenesis // inferred from sequence or structural similarity /// 0003256 // regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation // inferred from sequence or structural similarity /// 0006310 // DNA recombination // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007221 // positive regulation of transcription of Notch receptor target // inferred from direct assay /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009912 // auditory receptor cell fate commitment // inferred from electronic annotation /// 0009957 // epidermal cell fate specification // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030279 // negative regulation of ossification // inferred from sequence or structural similarity /// 0030513 // positive regulation of BMP signaling pathway // inferred from sequence or structural similarity /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035912 // dorsal aorta morphogenesis // inferred from sequence or structural similarity /// 0036302 // atrioventricular canal development // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048505 // regulation of timing of cell differentiation // inferred from electronic annotation /// 0048733 // sebaceous gland development // inferred from electronic annotation /// 0048820 // hair follicle maturation // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from sequence or structural similarity /// 0060486 // Clara cell differentiation // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from sequence or structural similarity /// 0060844 // arterial endothelial cell fate commitment // inferred from electronic annotation /// 0061314 // Notch signaling involved in heart development // inferred by curator /// 0072554 // blood vessel lumenization // inferred from sequence or structural similarity /// 0072602 // interleukin-4 secretion // inferred from electronic annotation /// 0097101 // blood vessel endothelial cell fate specification // inferred from sequence or structural similarity /// 1901186 // positive regulation of ERBB signaling pathway // inferred from sequence or structural similarity /// 1901189 // positive regulation of ephrin receptor signaling pathway // inferred from sequence or structural similarity /// 2000138 // positive regulation of cell proliferation involved in heart morphogenesis // inferred from sequence or structural similarity </td> <td> 0002193 // MAML1-RBP-Jkappa- ICN1 complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000150 // recombinase activity // non-traceable author statement /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0000982 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0001228 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation </td> <td> -27.85 </td> <td> 162.40 </td> <td> -1.36 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 212548_s_at </td> <td> 212548_s_at </td> <td> BF515124 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF515124 /FEA=EST /DB_XREF=gi:11600303 /DB_XREF=est:UI-H-BW1-anv-f-02-0-UI.s1 /CLONE=IMAGE:3083666 /UG=Hs.169600 KIAA0826 protein </td> <td> BF515124 </td> <td> FRY-like </td> <td> FRYL </td> <td> 285527 </td> <td> NM_001039751 /// NM_015030 /// XM_005248082 /// XM_005248083 /// XM_005248084 /// XM_005248085 /// XM_005248086 /// XM_005248087 /// XM_005248088 /// XM_005248089 /// XM_005248090 /// XM_005248091 /// XM_005248093 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td>  </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -33.25 </td> <td> 279.32 </td> <td> -1.35 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 212988_x_at </td> <td> 212988_x_at </td> <td> AL515810 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL515810 /FEA=EST /DB_XREF=gi:12779303 /DB_XREF=est:AL515810 /CLONE=CS0DA001YI24 (3 prime) /UG=Hs.14376 actin, gamma 1 </td> <td> AL515810 </td> <td> actin, beta /// actin, gamma 1 </td> <td> ACTB /// ACTG1 </td> <td> 60 /// 71 </td> <td> NM_001101 /// NM_001199954 /// NM_001614 /// NR_037688 /// XM_006715764 /// XM_006722048 /// XM_006722049 </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0006325 // chromatin organization // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred by curator /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction </td> <td> -536.23 </td> <td> 4937.16 </td> <td> -1.35 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 207826_s_at </td> <td> 207826_s_at </td> <td> NM_002167 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002167.1 /DEF=Homo sapiens inhibitor of DNA binding 3, dominant negative helix-loop-helix protein (ID3), mRNA.  /FEA=mRNA /GEN=ID3 /PROD=inhibitor of DNA binding 3, dominant negativehelix-loop-helix protein /DB_XREF=gi:10835060 /UG=Hs.76884 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein /FL=gb:NM_002167.1 </td> <td> NM_002167 </td> <td> inhibitor of DNA binding 3, dominant negative helix-loop-helix protein </td> <td> ID3 </td> <td> 3399 </td> <td> NM_002167 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0006275 // regulation of DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0030903 // notochord development // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> 46.60 </td> <td> 228.15 </td> <td> 1.35 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 206050_s_at </td> <td> 206050_s_at </td> <td> NM_002939 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002939.1 /DEF=Homo sapiens ribonucleaseangiogenin inhibitor (RNH), mRNA. /FEA=mRNA /GEN=RNH /PROD=ribonucleaseangiogenin inhibitor /DB_XREF=gi:4506564 /UG=Hs.75108 ribonucleaseangiogenin inhibitor /FL=gb:M36717.1 gb:NM_002939.1 </td> <td> NM_002939 </td> <td> ribonuclease/angiogenin inhibitor 1 </td> <td> RNH1 </td> <td> 6050 </td> <td> NM_002939 /// NM_203383 /// NM_203384 /// NM_203385 /// NM_203386 /// NM_203387 /// NM_203388 /// NM_203389 </td> <td> 0006402 // mRNA catabolic process // non-traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0045765 // regulation of angiogenesis // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0032311 // angiogenin-PRI complex // inferred from physical interaction /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008428 // ribonuclease inhibitor activity // inferred from direct assay </td> <td> -75.52 </td> <td> 438.69 </td> <td> -1.35 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 213274_s_at </td> <td> 213274_s_at </td> <td> AA020826 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA020826 /FEA=EST /DB_XREF=gi:1484570 /DB_XREF=est:ze64b04.s1 /CLONE=IMAGE:363727 /UG=Hs.297939 cathepsin B </td> <td> AA020826 </td> <td> cathepsin B </td> <td> CTSB </td> <td> 1508 </td> <td> NM_001908 /// NM_147780 /// NM_147781 /// NM_147782 /// NM_147783 /// XM_006716244 /// XM_006716245 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0006508 // proteolysis // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from direct assay /// 0030574 // collagen catabolic process // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0042981 // regulation of apoptotic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from expression pattern </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005622 // intracellular // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0036021 // endolysosome lumen // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008233 // peptidase activity // inferred from direct assay /// 0008234 // cysteine-type peptidase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043394 // proteoglycan binding // inferred from physical interaction </td> <td> 30.07 </td> <td> 435.26 </td> <td> 1.35 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 208778_s_at </td> <td> 208778_s_at </td> <td> BC000665 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000665.1 /DEF=Homo sapiens, t-complex 1, clone MGC:2234, mRNA, complete cds. /FEA=mRNA /PROD=t-complex 1 /DB_XREF=gi:12653758 /UG=Hs.4112 t-complex 1 /FL=gb:BC000665.1 </td> <td> BC000665 </td> <td> small nucleolar RNA, H/ACA box 29 /// t-complex 1 </td> <td> SNORA29 /// TCP1 </td> <td> 6950 /// 677812 </td> <td> NM_001008897 /// NM_030752 /// NR_002965 </td> <td> 0006457 // protein folding // traceable author statement /// 0007021 // tubulin complex assembly // non-traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0000242 // pericentriolar material // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0002199 // zona pellucida receptor complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 56.85 </td> <td> 826.02 </td> <td> 1.35 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 219350_s_at </td> <td> 219350_s_at </td> <td> NM_019887 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019887.1 /DEF=Homo sapiens second mitochondria-derived activator of caspase (SMAC), mRNA.  /FEA=mRNA /GEN=SMAC /PROD=second mitochondria-derived activator ofcaspase /DB_XREF=gi:9845296 /UG=Hs.169611 second mitochondria-derived activator of caspase /FL=gb:AF262240.1 gb:NM_019887.1 </td> <td> NM_019887 </td> <td> diablo, IAP-binding mitochondrial protein </td> <td> DIABLO </td> <td> 56616 </td> <td> NM_001278302 /// NM_001278303 /// NM_001278304 /// NM_001278342 /// NM_019887 /// NM_138929 /// NM_138930 </td> <td> 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // traceable author statement /// 0008631 // intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from electronic annotation /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0009898 // cytoplasmic side of plasma membrane // inferred from sequence or structural similarity /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -54.97 </td> <td> 326.21 </td> <td> -1.35 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 211385_x_at </td> <td> 211385_x_at </td> <td> U28169 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U28169.1 /DEF=Human clone hast4v aryl sulfotransferase mRNA, complete cds. /FEA=mRNA /PROD=aryl sulfotransferase /DB_XREF=gi:881502 /UG=Hs.272462 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2 /FL=gb:U28169.1 gb:U28170.1 </td> <td> U28169 </td> <td> sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2 </td> <td> SULT1A2 </td> <td> 6799 </td> <td> NM_001054 /// NM_177528 /// XM_006721076 /// XM_006721077 </td> <td> 0006584 // catecholamine metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0009309 // amine biosynthetic process // traceable author statement /// 0018958 // phenol-containing compound metabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement /// 0051923 // sulfation // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0004062 // aryl sulfotransferase activity // inferred from direct assay /// 0008146 // sulfotransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0047894 // flavonol 3-sulfotransferase activity // inferred from direct assay </td> <td> -24.12 </td> <td> 83.91 </td> <td> -1.35 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 208866_at </td> <td> 208866_at </td> <td> BF510713 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF510713 /FEA=EST /DB_XREF=gi:11594011 /DB_XREF=est:UI-H-BI4-aoh-b-03-0-UI.s1 /CLONE=IMAGE:3084629 /UG=Hs.144477 hypothetical protein PRO2975 /FL=gb:AF119911.1 </td> <td> BF510713 </td> <td> casein kinase 1, alpha 1 </td> <td> CSNK1A1 </td> <td> 1452 </td> <td> NM_001025105 /// NM_001271741 /// NM_001271742 /// NM_001892 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 41.37 </td> <td> 127.31 </td> <td> 1.35 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 202593_s_at </td> <td> 202593_s_at </td> <td> NM_016641 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016641.1 /DEF=Homo sapiens membrane interacting protein of RGS16 (MIR16), mRNA. /FEA=mRNA /GEN=MIR16 /PROD=membrane interacting protein of RGS16 /DB_XREF=gi:7706616 /UG=Hs.107014 membrane interacting protein of RGS16 /FL=gb:AF212862.1 gb:NM_016641.1 </td> <td> NM_016641 </td> <td> glycerophosphodiester phosphodiesterase 1 </td> <td> GDE1 </td> <td> 51573 </td> <td> NM_016641 /// XM_005255355 </td> <td> 0006071 // glycerol metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement </td> <td> 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0008889 // glycerophosphodiester phosphodiesterase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047395 // glycerophosphoinositol glycerophosphodiesterase activity // inferred from electronic annotation </td> <td> 30.60 </td> <td> 155.90 </td> <td> 1.35 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 35685_at </td> <td> 35685_at </td> <td> AL031228 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. Z14000:H.sapiens RING1 gene /cds=(75,1208) /gb=Z14000 /gi=296063 /ug=Hs.35384 /len=1529 </td> <td> AL031228 </td> <td> ring finger protein 1 </td> <td> RING1 </td> <td> 6015 </td> <td> NM_002931 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016568 // chromatin modification // non-traceable author statement /// 0016574 // histone ubiquitination // inferred from electronic annotation /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation </td> <td> 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0001739 // sex chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016604 // nuclear body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay /// 0035102 // PRC1 complex // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 19.57 </td> <td> 168.26 </td> <td> 1.34 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201352_at </td> <td> 201352_at </td> <td> NM_014263 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014263.1 /DEF=Homo sapiens YME1 (S.cerevisiae)-like 1 (YME1L1), mRNA. /FEA=mRNA /GEN=YME1L1 /PROD=YME1 (S.cerevisiae)-like 1 /DB_XREF=gi:7657688 /UG=Hs.206521 YME1 (S.cerevisiae)-like 1 /FL=gb:AF070656.1 gb:NM_014263.1 </td> <td> NM_014263 </td> <td> YME1-like 1 ATPase </td> <td> YME1L1 </td> <td> 10730 </td> <td> NM_001253866 /// NM_014263 /// NM_139312 /// NM_139313 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 25.28 </td> <td> 530.39 </td> <td> 1.34 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201814_at </td> <td> 201814_at </td> <td> AI300084 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI300084 /FEA=EST /DB_XREF=gi:3959430 /DB_XREF=est:qn59f02.x1 /CLONE=IMAGE:1902555 /UG=Hs.115740 KIAA0210 gene product /FL=gb:D86965.1 gb:NM_014744.1 </td> <td> AI300084 </td> <td> TBC1 domain family, member 5 </td> <td> TBC1D5 </td> <td> 9779 </td> <td> NM_001134380 /// NM_001134381 /// NM_014744 /// XM_005265611 /// XM_005265612 /// XM_005265613 /// XM_005265614 /// XM_005265615 /// XM_005265616 /// XM_006713429 /// XM_006713430 </td> <td> 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td> 0030904 // retromer complex // inferred from direct assay </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 19.90 </td> <td> 192.00 </td> <td> 1.34 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 205961_s_at </td> <td> 205961_s_at </td> <td> NM_004682 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004682.1 /DEF=Homo sapiens PC4 and SFRS1 interacting protein 2 (PSIP2), mRNA. /FEA=mRNA /GEN=PSIP2 /PROD=PC4 and SFRS1 interacting protein 2 /DB_XREF=gi:4758869 /UG=Hs.306179 PC4 and SFRS1 interacting protein 2 /FL=gb:AF098483.1 gb:NM_004682.1 </td> <td> NM_004682 </td> <td> PC4 and SFRS1 interacting protein 1 </td> <td> PSIP1 </td> <td> 11168 </td> <td> NM_001128217 /// NM_021144 /// NM_033222 /// XM_005251355 /// XM_005251356 /// XM_005251357 /// XM_005251358 </td> <td> 0000395 // mRNA 5'-splice site recognition // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0009408 // response to heat // inferred from sequence or structural similarity /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0075713 // establishment of integrated proviral latency // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005720 // nuclear heterochromatin // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0034399 // nuclear periphery // inferred from direct assay /// 0035327 // transcriptionally active chromatin // inferred from sequence or structural similarity </td> <td> 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0033613 // activating transcription factor binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0097100 // supercoiled DNA binding // inferred from sequence or structural similarity </td> <td> -27.80 </td> <td> 97.35 </td> <td> -1.34 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 210125_s_at </td> <td> 210125_s_at </td> <td> AF044773 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF044773.1 /DEF=Homo sapiens breakpoint cluster region protein 1 (BCRG1) mRNA, complete cds.  /FEA=mRNA /GEN=BCRG1 /PROD=breakpoint cluster region protein 1 /DB_XREF=gi:3002950 /UG=Hs.268763 Breakpoint cluster region protein, uterine leiomyoma, 1; barrier to autointegration factor /FL=gb:AF044773.1 </td> <td> AF044773 </td> <td> barrier to autointegration factor 1 </td> <td> BANF1 </td> <td> 8815 </td> <td> NM_001143985 /// NM_003860 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0007084 // mitotic nuclear envelope reassembly // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0015074 // DNA integration // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0075713 // establishment of integrated proviral latency // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 81.10 </td> <td> 533.90 </td> <td> 1.34 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201745_at </td> <td> 201745_at </td> <td> NM_002822 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002822.1 /DEF=Homo sapiens protein tyrosine kinase 9 (PTK9), mRNA. /FEA=mRNA /GEN=PTK9 /PROD=protein tyrosine kinase 9 /DB_XREF=gi:4506274 /UG=Hs.82643 protein tyrosine kinase 9 /FL=gb:NM_002822.1 gb:U02680.1 </td> <td> NM_002822 </td> <td> twinfilin actin-binding protein 1 </td> <td> TWF1 </td> <td> 5756 </td> <td> NM_001242397 /// NM_002822 /// NM_198974 /// NR_073472 /// NR_073473 </td> <td> 0030837 // negative regulation of actin filament polymerization // inferred from sequence or structural similarity /// 0042989 // sequestering of actin monomers // inferred from sequence or structural similarity /// 0043538 // regulation of actin phosphorylation // inferred from direct assay /// 0051016 // barbed-end actin filament capping // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0030016 // myofibril // inferred from sequence or structural similarity /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0032587 // ruffle membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from sequence or structural similarity /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity </td> <td> -29.65 </td> <td> 288.85 </td> <td> -1.34 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201243_s_at </td> <td> 201243_s_at </td> <td> NM_001677 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001677.1 /DEF=Homo sapiens ATPase, Na+K+ transporting, beta 1 polypeptide (ATP1B1), mRNA.  /FEA=mRNA /GEN=ATP1B1 /PROD=ATPase, Na+K+ transporting, beta 1 polypeptide /DB_XREF=gi:4502276 /UG=Hs.78629 ATPase, Na+K+ transporting, beta 1 polypeptide /FL=gb:BC000006.1 gb:NM_001677.1 </td> <td> NM_001677 </td> <td> ATPase, Na+/K+ transporting, beta 1 polypeptide </td> <td> ATP1B1 </td> <td> 481 </td> <td> NM_001001787 /// NM_001677 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030001 // metal ion transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005890 // sodium:potassium-exchanging ATPase complex // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005391 // sodium:potassium-exchanging ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0023026 // MHC class II protein complex binding // inferred from direct assay </td> <td> -99.22 </td> <td> 578.69 </td> <td> -1.34 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 211982_x_at </td> <td> 211982_x_at </td> <td> AL546600 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL546600 /FEA=EST /DB_XREF=gi:12879872 /DB_XREF=est:AL546600 /CLONE=CS0DI029YA23 (3 prime) /UG=Hs.70500 KIAA0370 protein </td> <td> AL546600 </td> <td> exportin 6 </td> <td> XPO6 </td> <td> 23214 </td> <td> NM_001270940 /// NM_015171 /// XM_005255195 /// XM_005255197 /// XM_005255198 /// XM_005255199 /// XM_005255200 </td> <td> 0006611 // protein export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred by curator /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from direct assay </td> <td> -26.00 </td> <td> 326.93 </td> <td> -1.34 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 212533_at </td> <td> 212533_at </td> <td> X62048 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X62048.1 /DEF=H.sapiens Wee1 hu gene. /FEA=mRNA /GEN=Wee1 Hu /DB_XREF=gi:499071 /UG=Hs.75188 wee1+ (S. pombe) homolog /FL=gb:NM_003390.1 gb:U10564.1 </td> <td> X62048 </td> <td> WEE1 G2 checkpoint kinase </td> <td> WEE1 </td> <td> 7465 </td> <td> NM_001143976 /// NM_003390 /// XM_005253118 /// XM_005253119 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 27.68 </td> <td> 129.34 </td> <td> 1.34 </td> <td> 0.22 </td> <td> 0.29 </td> <td> -4.58 </td> </tr>
  <tr> <td> 218377_s_at </td> <td> 218377_s_at </td> <td> NM_016940 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016940.1 /DEF=Homo sapiens chromosome 21 open reading frame 6 (C21ORF6), mRNA. /FEA=mRNA /GEN=C21ORF6 /PROD=chromosome 21 open reading frame 6 /DB_XREF=gi:8393017 /UG=Hs.34136 chromosome 21 open reading frame 6 /FL=gb:AF212232.1 gb:NM_016940.1 </td> <td> NM_016940 </td> <td> RWD domain containing 2B </td> <td> RWDD2B </td> <td> 10069 </td> <td> NM_016940 /// XM_006723952 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -27.30 </td> <td> 135.90 </td> <td> -1.34 </td> <td> 0.22 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 214323_s_at </td> <td> 214323_s_at </td> <td> N36842 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N36842 /FEA=EST /DB_XREF=gi:1157984 /DB_XREF=est:yy35g03.s1 /CLONE=IMAGE:273268 /UG=Hs.274412 similar to yeast Upf3, variant A </td> <td> N36842 </td> <td> UPF3 regulator of nonsense transcripts homolog A (yeast) </td> <td> UPF3A </td> <td> 65110 </td> <td> NM_023011 /// NM_080687 /// XM_005266200 /// XM_005266201 /// XM_005266202 /// XM_006719991 /// XR_429283 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // non-traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0035145 // exon-exon junction complex // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005487 // nucleocytoplasmic transporter activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 19.97 </td> <td> 199.11 </td> <td> 1.34 </td> <td> 0.22 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201550_x_at </td> <td> 201550_x_at </td> <td> NM_001614 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001614.2 /DEF=Homo sapiens actin, gamma 1 (ACTG1), mRNA. /FEA=mRNA /GEN=ACTG1 /PROD=actin, gamma 1 propeptide /DB_XREF=gi:11038618 /UG=Hs.14376 actin, gamma 1 /FL=gb:NM_001614.2 gb:BC000292.1 </td> <td> NM_001614 </td> <td> actin, beta /// actin, gamma 1 </td> <td> ACTB /// ACTG1 </td> <td> 60 /// 71 </td> <td> NM_001101 /// NM_001199954 /// NM_001614 /// NR_037688 /// XM_006715764 /// XM_006722048 /// XM_006722049 </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0006325 // chromatin organization // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred by curator /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction </td> <td> -781.30 </td> <td> 5606.55 </td> <td> -1.34 </td> <td> 0.22 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 207318_s_at </td> <td> 207318_s_at </td> <td> AJ297710 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AJ297710.1 /DEF=Homo sapiens mRNA for CDC2L5 protein kinase, (CDC2L5 gene), isoform 2.  /FEA=mRNA /GEN=CDC2L5 /PROD=CDC2L5 protein kinase /DB_XREF=gi:10443223 /UG=Hs.59498 cell division cycle 2-like 5 (cholinesterase-related cell division controller) /FL=gb:M80629.1 gb:NM_003718.1 </td> <td> AJ297710 </td> <td> cyclin-dependent kinase 13 </td> <td> CDK13 </td> <td> 8621 </td> <td> NM_003718 /// NM_031267 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from sequence or structural similarity /// 0000380 // alternative mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007088 // regulation of mitosis // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from mutant phenotype /// 0070816 // phosphorylation of RNA polymerase II C-terminal domain // inferred from direct assay </td> <td> 0002945 // cyclin K-CDK13 complex // inferred from physical interaction /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0019908 // nuclear cyclin-dependent protein kinase holoenzyme complex // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030332 // cyclin binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -32.02 </td> <td> 201.84 </td> <td> -1.33 </td> <td> 0.22 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 215690_x_at </td> <td> 215690_x_at </td> <td> AL157437 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL157437.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434E1512 (from clone DKFZp434E1512); partial cds.  /FEA=mRNA /GEN=DKFZp434E1512 /PROD=hypothetical protein /DB_XREF=gi:7018511 /UG=Hs.4742 anchor attachment protein 1 (Gaa1p, yeast) homolog </td> <td> AL157437 </td> <td> glycosylphosphatidylinositol anchor attachment 1 </td> <td> GPAA1 </td> <td> 8733 </td> <td> NM_003801 </td> <td> 0006461 // protein complex assembly // non-traceable author statement /// 0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0006621 // protein retention in ER lumen // non-traceable author statement /// 0016255 // attachment of GPI anchor to protein // non-traceable author statement /// 0016255 // attachment of GPI anchor to protein // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0042765 // GPI-anchor transamidase complex // traceable author statement </td> <td> 0003923 // GPI-anchor transamidase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015631 // tubulin binding // non-traceable author statement /// 0034235 // GPI anchor binding // inferred from mutant phenotype </td> <td> -33.35 </td> <td> 215.70 </td> <td> -1.33 </td> <td> 0.22 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 210208_x_at </td> <td> 210208_x_at </td> <td> BC003133 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003133.1 /DEF=Homo sapiens, Similar to HLA-B associated transcript-3, clone MGC:3619, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to HLA-B associated transcript-3 /DB_XREF=gi:13111924 /UG=Hs.274348 HLA-B associated transcript-3 /FL=gb:BC003133.1 </td> <td> BC003133 </td> <td> BCL2-associated athanogene 6 </td> <td> BAG6 </td> <td> 7917 </td> <td> NM_001098534 /// NM_001199697 /// NM_001199698 /// NM_004639 /// NM_080702 /// NM_080703 /// XM_005249393 /// XM_005249396 /// XM_005272880 /// XM_005272883 /// XM_005275034 /// XM_005275037 /// XM_005275169 /// XM_005275172 /// XM_005275292 /// XM_005275295 /// XM_005275464 /// XM_005275468 /// XM_005275597 /// XM_005275601 /// XM_006715192 /// XM_006715193 /// XM_006715194 /// XM_006715195 /// XM_006715196 /// XM_006715197 /// XM_006715198 /// XM_006715199 /// XM_006715200 /// XM_006715201 /// XM_006715202 /// XM_006715203 /// XM_006725509 /// XM_006725510 /// XM_006725511 /// XM_006725512 /// XM_006725513 /// XM_006725514 /// XM_006725515 /// XM_006725516 /// XM_006725517 /// XM_006725518 /// XM_006725519 /// XM_006725520 /// XM_006725725 /// XM_006725726 /// XM_006725727 /// XM_006725728 /// XM_006725729 /// XM_006725730 /// XM_006725731 /// XM_006725732 /// XM_006725733 /// XM_006725734 /// XM_006725735 /// XM_006725736 /// XM_006725835 /// XM_006725836 /// XM_006725837 /// XM_006725838 /// XM_006725839 /// XM_006725840 /// XM_006725841 /// XM_006725842 /// XM_006725843 /// XM_006725844 /// XM_006725845 /// XM_006725846 /// XM_006725923 /// XM_006725924 /// XM_006725925 /// XM_006725926 /// XM_006725927 /// XM_006725928 /// XM_006725929 /// XM_006725930 /// XM_006725931 /// XM_006725932 /// XM_006725933 /// XM_006725934 /// XM_006726025 /// XM_006726026 /// XM_006726027 /// XM_006726028 /// XM_006726029 /// XM_006726030 /// XM_006726031 /// XM_006726032 /// XM_006726033 /// XM_006726034 /// XM_006726035 /// XM_006726036 /// XM_006726113 /// XM_006726114 /// XM_006726115 /// XM_006726116 /// XM_006726117 /// XM_006726118 /// XM_006726119 /// XM_006726120 /// XM_006726121 /// XM_006726122 /// XM_006726123 /// XM_006726124 </td> <td> 0001822 // kidney development // inferred from sequence or structural similarity /// 0002376 // immune system process // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007130 // synaptonemal complex assembly // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0016568 // chromatin modification // inferred from electronic annotation /// 0018393 // internal peptidyl-lysine acetylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from sequence or structural similarity /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from mutant phenotype /// 0045861 // negative regulation of proteolysis // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0071818 // BAT3 complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030544 // Hsp70 protein binding // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from sequence or structural similarity /// 0043022 // ribosome binding // inferred from direct assay /// 0070628 // proteasome binding // inferred from sequence or structural similarity </td> <td> -49.77 </td> <td> 349.56 </td> <td> -1.33 </td> <td> 0.22 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200072_s_at </td> <td> 200072_s_at </td> <td> AF061832 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF061832.1 /DEF=Homo sapiens M4 protein deletion mutant mRNA, complete cds. /FEA=mRNA /PROD=M4 protein deletion mutant /DB_XREF=gi:3126877 /UG=Hs.79024 heterogeneous nuclear ribonucleoprotein M /FL=gb:AF061832.1 </td> <td> AF061832 </td> <td> heterogeneous nuclear ribonucleoprotein M </td> <td> HNRNPM </td> <td> 4670 </td> <td> NM_001297418 /// NM_005968 /// NM_031203 /// XM_005272478 /// XM_005272479 /// XM_005272480 /// XM_005272481 /// XM_005272482 /// XM_005272483 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from mutant phenotype /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0042382 // paraspeckles // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -133.28 </td> <td> 821.21 </td> <td> -1.33 </td> <td> 0.22 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 221952_x_at </td> <td> 221952_x_at </td> <td> AB037814 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB037814.1 /DEF=Homo sapiens mRNA for KIAA1393 protein, partial cds. /FEA=mRNA /GEN=KIAA1393 /PROD=KIAA1393 protein /DB_XREF=gi:7243166 /UG=Hs.33317 KIAA1393 protein </td> <td> AB037814 </td> <td> tRNA methyltransferase 5 </td> <td> TRMT5 </td> <td> 57570 </td> <td> NM_020810 /// XM_005267916 </td> <td> 0008033 // tRNA processing // inferred from electronic annotation /// 0030488 // tRNA methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation </td> <td> 0008168 // methyltransferase activity // inferred from electronic annotation /// 0009019 // tRNA (guanine-N1-)-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0052906 // tRNA (guanine(37)-N(1))-methyltransferase activity // inferred from electronic annotation </td> <td> 113.35 </td> <td> 902.33 </td> <td> 1.33 </td> <td> 0.22 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 213306_at </td> <td> 213306_at </td> <td> AA917899 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA917899 /FEA=EST /DB_XREF=gi:3057789 /DB_XREF=est:ol76e05.s1 /CLONE=IMAGE:1535552 /UG=Hs.169378 multiple PDZ domain protein </td> <td> AA917899 </td> <td> multiple PDZ domain protein </td> <td> MPDZ </td> <td> 8777 </td> <td> NM_001261406 /// NM_001261407 /// NM_003829 /// XM_005251622 /// XM_005251623 /// XM_006716885 /// XM_006716886 /// XM_006716887 /// XM_006716888 /// XM_006716889 /// XM_006716890 /// XM_006716891 /// XM_006716892 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016327 // apicolateral plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction </td> <td> 19.65 </td> <td> 105.17 </td> <td> 1.33 </td> <td> 0.22 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200671_s_at </td> <td> 200671_s_at </td> <td> N92501 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N92501 /FEA=EST /DB_XREF=gi:1264810 /DB_XREF=est:zb28a07.s1 /CLONE=IMAGE:304884 /UG=Hs.107164 spectrin, beta, non-erythrocytic 1 /FL=gb:M96803.1 gb:NM_003128.1 </td> <td> N92501 </td> <td> spectrin, beta, non-erythrocytic 1 </td> <td> SPTBN1 </td> <td> 6711 </td> <td> NM_003128 /// NM_178313 /// XM_005264517 /// XM_005264518 /// XM_006712087 </td> <td> 0000281 // mitotic cytokinesis // inferred from mutant phenotype /// 0007009 // plasma membrane organization // inferred from mutant phenotype /// 0007182 // common-partner SMAD protein phosphorylation // inferred from electronic annotation /// 0007184 // SMAD protein import into nucleus // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0043001 // Golgi to plasma membrane protein transport // inferred from mutant phenotype /// 0051693 // actin filament capping // inferred from electronic annotation /// 0071709 // membrane assembly // inferred from mutant phenotype /// 0072661 // protein targeting to plasma membrane // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008091 // spectrin // inferred from electronic annotation /// 0014731 // spectrin-associated cytoskeleton // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030673 // axolemma // inferred from sequence or structural similarity /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031430 // M band // inferred from electronic annotation /// 0032437 // cuticular plate // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction /// 0030506 // ankyrin binding // non-traceable author statement /// 0032403 // protein complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -29.35 </td> <td> 102.92 </td> <td> -1.33 </td> <td> 0.22 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 202827_s_at </td> <td> 202827_s_at </td> <td> AU149305 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU149305 /FEA=EST /DB_XREF=gi:11010826 /DB_XREF=est:AU149305 /CLONE=NT2RM4002036 /UG=Hs.2399 matrix metalloproteinase 14 (membrane-inserted) /FL=gb:U41078.1 gb:NM_004995.2 </td> <td> AU149305 </td> <td> matrix metallopeptidase 14 (membrane-inserted) </td> <td> MMP14 </td> <td> 4323 </td> <td> NM_004995 </td> <td> 0001503 // ossification // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001935 // endothelial cell proliferation // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009725 // response to hormone // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030574 // collagen catabolic process // traceable author statement /// 0031638 // zymogen activation // inferred from electronic annotation /// 0043615 // astrocyte cell migration // inferred from electronic annotation /// 0043627 // response to estrogen // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0048771 // tissue remodeling // inferred from electronic annotation /// 0051895 // negative regulation of focal adhesion assembly // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 62.92 </td> <td> 221.71 </td> <td> 1.32 </td> <td> 0.22 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 208877_at </td> <td> 208877_at </td> <td> W74494 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W74494 /FEA=EST /DB_XREF=gi:1384781 /DB_XREF=est:zd75f10.s1 /CLONE=IMAGE:346507 /UG=Hs.284275 Homo sapiens PAK2 mRNA, complete cds /FL=gb:AF092132.1 </td> <td> W74494 </td> <td> p21 protein (Cdc42/Rac)-activated kinase 2 </td> <td> PAK2 </td> <td> 5062 </td> <td> NM_002577 </td> <td> 0000278 // mitotic cell cycle // not recorded /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007409 // axonogenesis // not recorded /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // not recorded /// 0030036 // actin cytoskeleton organization // not recorded /// 0031295 // T cell costimulation // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001271 // negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 21.62 </td> <td> 250.44 </td> <td> 1.32 </td> <td> 0.23 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 207051_at </td> <td> 207051_at </td> <td> NM_005495 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005495.1 /DEF=Homo sapiens solute carrier family 17 (sodium phosphate), member 4 (SLC17A4), mRNA.  /FEA=mRNA /GEN=SLC17A4 /PROD=solute carrier family 17 (sodium phosphate),member 4 /DB_XREF=gi:4885440 /UG=Hs.128827 solute carrier family 17 (sodium phosphate), member 4 /FL=gb:AB020527.1 gb:NM_005495.1 </td> <td> NM_005495 </td> <td> solute carrier family 17, member 4 </td> <td> SLC17A4 </td> <td> 10050 </td> <td> NM_001286121 /// NM_005495 /// XM_006714946 </td> <td> 0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // traceable author statement /// 0035435 // phosphate ion transmembrane transport // traceable author statement /// 0035725 // sodium ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation </td> <td> 0005436 // sodium:phosphate symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation </td> <td> 17.95 </td> <td> 41.80 </td> <td> 1.32 </td> <td> 0.23 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 214239_x_at </td> <td> 214239_x_at </td> <td> AI560455 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI560455 /FEA=EST /DB_XREF=gi:4510796 /DB_XREF=est:tn11b01.x1 /CLONE=IMAGE:2167273 /UG=Hs.184669 zinc finger protein 144 (Mel-18) </td> <td> AI560455 </td> <td> polycomb group ring finger 2 </td> <td> PCGF2 </td> <td> 7703 </td> <td> NM_007144 /// XM_005257640 /// XM_005257641 /// XM_005257642 /// XM_006722071 /// XM_006725342 /// XM_006725343 /// XM_006725344 /// XM_006725345 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0001739 // sex chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0016604 // nuclear body // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay /// 0035102 // PRC1 complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 35.90 </td> <td> 168.80 </td> <td> 1.32 </td> <td> 0.23 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 204970_s_at </td> <td> 204970_s_at </td> <td> NM_002359 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002359.1 /DEF=Homo sapiens v-maf musculoaponeurotic fibrosarcoma (avian) oncogene family, protein G (MAFG), mRNA.  /FEA=mRNA /GEN=MAFG /PROD=v-maf musculoaponeurotic fibrosarcoma (avian)oncogene family, protein G /DB_XREF=gi:4505072 /UG=Hs.252229 v-maf musculoaponeurotic fibrosarcoma (avian) oncogene family, protein G /FL=gb:AF059195.1 gb:NM_002359.1 </td> <td> NM_002359 </td> <td> v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G </td> <td> MAFG </td> <td> 4097 </td> <td> NM_002359 /// NM_032711 /// XM_006722282 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030534 // adult behavior // inferred from electronic annotation /// 0030641 // regulation of cellular pH // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045604 // regulation of epidermal cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 23.12 </td> <td> 98.44 </td> <td> 1.32 </td> <td> 0.23 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 213074_at </td> <td> 213074_at </td> <td> BG545769 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG545769 /FEA=EST /DB_XREF=gi:13544434 /DB_XREF=est:602573042F1 /CLONE=IMAGE:4701250 /UG=Hs.9927 Homo sapiens mRNA; cDNA DKFZp564D156 (from clone DKFZp564D156) </td> <td> BG545769 </td> <td> pleckstrin homology domain interacting protein </td> <td> PHIP </td> <td> 55023 </td> <td> NM_017934 /// XM_005248729 </td> <td> 0001932 // regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // non-traceable author statement /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043568 // positive regulation of insulin-like growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0045840 // positive regulation of mitosis // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005158 // insulin receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0070577 // lysine-acetylated histone binding // inferred from direct assay </td> <td> 22.10 </td> <td> 139.62 </td> <td> 1.32 </td> <td> 0.23 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203692_s_at </td> <td> 203692_s_at </td> <td> AI640363 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI640363 /FEA=EST /DB_XREF=gi:4703472 /DB_XREF=est:wa17d03.x1 /CLONE=IMAGE:2298341 /UG=Hs.1189 E2F transcription factor 3 /FL=gb:NM_001949.2 </td> <td> AI640363 </td> <td> E2F transcription factor 3 </td> <td> E2F3 </td> <td> 1871 </td> <td> NM_001243076 /// NM_001949 /// XM_005248865 /// XM_005248866 /// XM_005248868 </td> <td> 0000085 // mitotic G2 phase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0001047 // core promoter binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -22.98 </td> <td> 81.89 </td> <td> -1.32 </td> <td> 0.23 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200792_at </td> <td> 200792_at </td> <td> NM_001469 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001469.1 /DEF=Homo sapiens thyroid autoantigen 70kD (Ku antigen) (G22P1), mRNA. /FEA=mRNA /GEN=G22P1 /PROD=thyroid autoantigen 70kD (Ku antigen) /DB_XREF=gi:4503840 /UG=Hs.197345 thyroid autoantigen 70kD (Ku antigen) /FL=gb:J04611.1 gb:M32865.1 gb:J04607.1 gb:NM_001469.1 </td> <td> NM_001469 </td> <td> X-ray repair complementing defective repair in Chinese hamster cells 6 </td> <td> XRCC6 </td> <td> 2547 </td> <td> NM_001288976 /// NM_001288977 /// NM_001288978 /// NM_001469 </td> <td> 0000723 // telomere maintenance // traceable author statement /// 0006266 // DNA ligation // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from mutant phenotype /// 0006303 // double-strand break repair via nonhomologous end joining // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement /// 0033151 // V(D)J recombination // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0071475 // cellular hyperosmotic salinity response // inferred from electronic annotation /// 0071481 // cellular response to X-ray // inferred from electronic annotation /// 0075713 // establishment of integrated proviral latency // traceable author statement </td> <td> 0000783 // nuclear telomere cap complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation /// 0043564 // Ku70:Ku80 complex // inferred from direct assay /// 0070419 // nonhomologous end joining complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003691 // double-stranded telomeric DNA binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0042162 // telomeric DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051575 // 5'-deoxyribose-5-phosphate lyase activity // inferred from mutant phenotype </td> <td> -94.10 </td> <td> 1082.67 </td> <td> -1.32 </td> <td> 0.23 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201138_s_at </td> <td> 201138_s_at </td> <td> BG532929 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG532929 /FEA=EST /DB_XREF=gi:13524468 /DB_XREF=est:602580582F1 /CLONE=IMAGE:4718180 /UG=Hs.83715 Sjogren syndrome antigen B (autoantigen La) /FL=gb:NM_003142.1 gb:BC001289.1 gb:J04205.1 </td> <td> BG532929 </td> <td> Sjogren syndrome antigen B (autoantigen La) </td> <td> SSB </td> <td> 6741 </td> <td> NM_001294145 /// NM_003142 /// XM_005246811 </td> <td> 0006396 // RNA processing // inferred from electronic annotation /// 0006400 // tRNA modification // traceable author statement /// 0008334 // histone mRNA metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000049 // tRNA binding // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 25.80 </td> <td> 182.82 </td> <td> 1.32 </td> <td> 0.23 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200825_s_at </td> <td> 200825_s_at </td> <td> NM_006389 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006389.2 /DEF=Homo sapiens oxygen regulated protein (150kD) (ORP150), mRNA. /FEA=mRNA /GEN=ORP150 /PROD=oxygen regulated protein precursor /DB_XREF=gi:13699861 /UG=Hs.277704 oxygen regulated protein (150kD) /FL=gb:NM_006389.2 gb:U65785.1 </td> <td> NM_006389 </td> <td> hypoxia up-regulated 1 </td> <td> HYOU1 </td> <td> 10525 </td> <td> NM_001130991 /// NM_006389 /// XM_005271390 /// XM_005271392 /// XM_005271393 /// XM_005271394 </td> <td> 0002931 // response to ischemia // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> 54.05 </td> <td> 881.67 </td> <td> 1.32 </td> <td> 0.23 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 218366_x_at </td> <td> 218366_x_at </td> <td> NM_022734 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022734.1 /DEF=Homo sapiens hypothetical protein FLJ20859 (FLJ20859), mRNA. /FEA=mRNA /GEN=FLJ20859 /PROD=hypothetical protein FLJ20859 /DB_XREF=gi:12232388 /UG=Hs.6311 hypothetical protein FLJ20859 /FL=gb:NM_022734.1 </td> <td> NM_022734 </td> <td> methyltransferase like 17 </td> <td> METTL17 </td> <td> 64745 </td> <td> NM_001029991 /// NM_001029992 /// NM_022734 /// XM_006720235 /// XM_006720236 /// XM_006720237 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0005507 // copper ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 34.28 </td> <td> 122.81 </td> <td> 1.32 </td> <td> 0.23 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 213002_at </td> <td> 213002_at </td> <td> AA770596 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA770596 /FEA=EST /DB_XREF=gi:2821834 /DB_XREF=est:oe54a06.s1 /CLONE=IMAGE:1415410 /UG=Hs.75607 myristoylated alanine-rich protein kinase C substrate (MARCKS, 80K-L) </td> <td> AA770596 </td> <td> myristoylated alanine-rich protein kinase C substrate </td> <td> MARCKS </td> <td> 4082 </td> <td> NM_002356 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement </td> <td> 0005813 // centrosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0042585 // germinal vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0051015 // actin filament binding // traceable author statement </td> <td> -87.50 </td> <td> 366.40 </td> <td> -1.31 </td> <td> 0.23 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203676_at </td> <td> 203676_at </td> <td> NM_002076 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002076.1 /DEF=Homo sapiens glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID) (GNS), mRNA.  /FEA=mRNA /GEN=GNS /PROD=glucosamine (N-acetyl)-6-sulfatase precursor /DB_XREF=gi:4504060 /UG=Hs.321070 glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID) /FL=gb:NM_002076.1 </td> <td> NM_002076 </td> <td> glucosamine (N-acetyl)-6-sulfatase </td> <td> GNS </td> <td> 2799 </td> <td> NM_002076 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006027 // glycosaminoglycan catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0042339 // keratan sulfate metabolic process // traceable author statement /// 0042340 // keratan sulfate catabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005764 // lysosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -40.52 </td> <td> 145.29 </td> <td> -1.31 </td> <td> 0.23 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 212875_s_at </td> <td> 212875_s_at </td> <td> AP001745 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AP001745 /DEF=Homo sapiens genomic DNA, chromosome 21q, section 89105 /FEA=mRNA_3 /DB_XREF=gi:7768737 /UG=Hs.16007 chromosome 21 open reading frame 25 </td> <td> AP001745 </td> <td> C2 calcium-dependent domain containing 2 </td> <td> C2CD2 </td> <td> 25966 </td> <td> NM_015500 /// NM_199050 /// XM_005261106 /// XM_005261107 /// XM_005261109 </td> <td>  </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -16.23 </td> <td> 140.39 </td> <td> -1.31 </td> <td> 0.23 </td> <td> 0.30 </td> <td> -4.58 </td> </tr>
  <tr> <td> 211933_s_at </td> <td> 211933_s_at </td> <td> AA528233 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA528233 /FEA=EST /DB_XREF=gi:2270302 /DB_XREF=est:nh92b01.s1 /CLONE=IMAGE:965929 /UG=Hs.249247 heterogeneous nuclear protein similar to rat helix destabilizing protein </td> <td> AA528233 </td> <td> heterogeneous nuclear ribonucleoprotein A3 /// heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 </td> <td> HNRNPA3 /// HNRNPA3P1 </td> <td> 10151 /// 220988 </td> <td> NM_194247 /// NR_002726 /// XM_005246380 /// XM_005246381 /// XM_005246382 /// XM_006712365 /// XR_427076 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 74.58 </td> <td> 596.76 </td> <td> 1.31 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 211934_x_at </td> <td> 211934_x_at </td> <td> W87689 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W87689 /FEA=EST /DB_XREF=gi:1401814 /DB_XREF=est:zh68c04.s1 /CLONE=IMAGE:417222 /UG=Hs.76847 KIAA0088 protein /FL=gb:NM_014610.1 </td> <td> W87689 </td> <td> glucosidase, alpha; neutral AB </td> <td> GANAB </td> <td> 23193 </td> <td> NM_001278192 /// NM_001278193 /// NM_001278194 /// NM_014610 /// NM_198334 /// NM_198335 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0017177 // glucosidase II complex // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0033919 // glucan 1,3-alpha-glucosidase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -108.75 </td> <td> 668.73 </td> <td> -1.31 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 212273_x_at </td> <td> 212273_x_at </td> <td> AI591100 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI591100 /FEA=EST /DB_XREF=gi:4600148 /DB_XREF=est:tw91c03.x1 /CLONE=IMAGE:2267044 /UG=Hs.113368 neuroendocrine secretory protein 55 </td> <td> AI591100 </td> <td> GNAS complex locus </td> <td> GNAS </td> <td> 2778 </td> <td> NM_000516 /// NM_001077488 /// NM_001077489 /// NM_001077490 /// NM_016592 /// NM_080425 /// NM_080426 /// NR_003259 /// XM_005260401 /// XM_005260402 /// XM_006723781 /// XM_006723782 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // not recorded /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007565 // female pregnancy // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007606 // sensory perception of chemical stimulus // not recorded /// 0007608 // sensory perception of smell // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0009306 // protein secretion // non-traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040015 // negative regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040032 // post-embryonic body morphogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043950 // positive regulation of cAMP-mediated signaling // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0046907 // intracellular transport // non-traceable author statement /// 0048589 // developmental growth // inferred from direct assay /// 0048589 // developmental growth // inferred from mutant phenotype /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050890 // cognition // inferred from direct assay /// 0050890 // cognition // inferred from mutant phenotype /// 0051216 // cartilage development // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060348 // bone development // inferred from direct assay /// 0060348 // bone development // inferred from mutant phenotype /// 0060789 // hair follicle placode formation // inferred from direct assay /// 0060789 // hair follicle placode formation // inferred from mutant phenotype /// 0070527 // platelet aggregation // inferred from direct assay /// 0070527 // platelet aggregation // inferred from mutant phenotype /// 0071107 // response to parathyroid hormone // inferred from mutant phenotype /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071514 // genetic imprinting // inferred from electronic annotation /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity /// 0071880 // adenylate cyclase-activating adrenergic receptor signaling pathway // inferred from direct assay </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from sequence or structural similarity /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031224 // intrinsic component of membrane // inferred from direct assay /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // not recorded /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004016 // adenylate cyclase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from direct assay /// 0005159 // insulin-like growth factor receptor binding //  /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0031698 // beta-2 adrenergic receptor binding //  /// 0031748 // D1 dopamine receptor binding //  /// 0031852 // mu-type opioid receptor binding // not recorded /// 0035255 // ionotropic glutamate receptor binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051430 // corticotropin-releasing hormone receptor 1 binding // </td> <td> -340.95 </td> <td> 2191.10 </td> <td> -1.31 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 209284_s_at </td> <td> 209284_s_at </td> <td> AI922509 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI922509 /FEA=EST /DB_XREF=gi:5658473 /DB_XREF=est:wh13g11.x1 /CLONE=IMAGE:2380676 /UG=Hs.23440 KIAA1105 protein /FL=gb:AF180425.2 </td> <td> AI922509 </td> <td> family with sequence similarity 208, member A </td> <td> FAM208A </td> <td> 23272 </td> <td> NM_001112736 /// NM_015224 /// XM_005264999 /// XM_006713077 /// XM_006713078 </td> <td>  </td> <td>  </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -25.75 </td> <td> 107.70 </td> <td> -1.31 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 213594_x_at </td> <td> 213594_x_at </td> <td> AU130523 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU130523 /FEA=EST /DB_XREF=gi:10990877 /DB_XREF=est:AU130523 /CLONE=NT2RP3000977 /UG=Hs.3530 TLS-associated serine-arginine protein 2 </td> <td> AU130523 </td> <td> serine/arginine-rich splicing factor 10 </td> <td> SRSF10 </td> <td> 10772 </td> <td> NM_001191005 /// NM_001191006 /// NM_001191007 /// NM_001191009 /// NM_006625 /// NM_054016 /// NR_034035 /// XM_006710298 /// XM_006710299 /// XM_006710300 /// XM_006710301 </td> <td> 0000244 // spliceosomal tri-snRNP complex assembly // non-traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006376 // mRNA splice site selection // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // non-traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from direct assay /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay </td> <td> 0005634 // nucleus // inferred by curator /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050733 // RS domain binding // non-traceable author statement /// 0051082 // unfolded protein binding // non-traceable author statement </td> <td> 21.60 </td> <td> 160.20 </td> <td> 1.31 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 217466_x_at </td> <td> 217466_x_at </td> <td> L48784 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:L48784 /DEF=050 Homo sapiens cDNA /FEA=mRNA /DB_XREF=gi:1066715 /UG=Hs.182426 ribosomal protein S2 </td> <td> L48784 </td> <td> ribosomal protein S2 /// small nucleolar RNA, H/ACA box 64 </td> <td> RPS2 /// SNORA64 </td> <td> 6187 /// 26784 </td> <td> NM_002952 /// NR_002326 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051347 // positive regulation of transferase activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 372.73 </td> <td> 1533.34 </td> <td> 1.30 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200012_x_at </td> <td> 200012_x_at </td> <td> NM_000982 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000982.1 /DEF=Homo sapiens ribosomal protein L21 (gene or pseudogene) (RPL21), mRNA.  /FEA=mRNA /GEN=RPL21 /PROD=ribosomal protein L21 (gene or pseudogene) /DB_XREF=gi:4506610 /UG=Hs.184108 ribosomal protein L21 /FL=gb:BC001603.1 gb:NM_000982.1 gb:U14967.1 gb:U25789.1 </td> <td> NM_000982 </td> <td> ribosomal protein L21 /// ribosomal protein L21 pseudogene 28 /// small nucleolar RNA, H/ACA box 27 /// small nucleolar RNA, C/D box 102 </td> <td> RPL21 /// RPL21P28 /// SNORA27 /// SNORD102 </td> <td> 6144 /// 26771 /// 619499 /// 100131205 </td> <td> NM_000982 /// NR_002574 /// NR_002575 /// NR_026911 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -202.35 </td> <td> 2681.90 </td> <td> -1.30 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 213356_x_at </td> <td> 213356_x_at </td> <td> AL568186 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL568186 /FEA=EST /DB_XREF=gi:12922280 /DB_XREF=est:AL568186 /CLONE=CS0DF035YA23 (3 prime) /UG=Hs.249495 heterogeneous nuclear ribonucleoprotein A1 </td> <td> AL568186 </td> <td> heterogeneous nuclear ribonucleoprotein A1 /// heterogeneous nuclear ribonucleoprotein A1-like 2 /// heterogeneous nuclear ribonucleoprotein A1 pseudogene 10 /// heterogeneous nuclear ribonucleoprotein A1 pseudogene 33 </td> <td> HNRNPA1 /// HNRNPA1L2 /// HNRNPA1P10 /// HNRNPA1P33 </td> <td> 3178 /// 144983 /// 664709 /// 728643 </td> <td> NM_001011724 /// NM_001011725 /// NM_002136 /// NM_031157 /// NR_002944 /// NR_003277 /// XM_005268826 /// XR_245923 /// XR_245924 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006405 // RNA export from nucleus // inferred by curator /// 0006810 // transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051168 // nuclear export // inferred from direct assay /// 0051170 // nuclear import // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred by curator /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -292.55 </td> <td> 3012.95 </td> <td> -1.30 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 219293_s_at </td> <td> 219293_s_at </td> <td> NM_013341 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013341.1 /DEF=Homo sapiens hypothetical protein (PTD004), mRNA. /FEA=mRNA /GEN=PTD004 /PROD=hypothetical protein /DB_XREF=gi:9558756 /UG=Hs.86347 hypothetical protein /FL=gb:AF078859.1 gb:AF078868.1 gb:AF116703.1 gb:NM_013341.1 </td> <td> NM_013341 </td> <td> Obg-like ATPase 1 </td> <td> OLA1 </td> <td> 29789 </td> <td> NM_001011708 /// NM_013341 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0015684 // ferrous iron transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0015093 // ferrous iron transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from electronic annotation /// 0043023 // ribosomal large subunit binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -37.98 </td> <td> 604.89 </td> <td> -1.30 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 212758_s_at </td> <td> 212758_s_at </td> <td> AI373166 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI373166 /FEA=EST /DB_XREF=gi:4153032 /DB_XREF=est:qz13b01.x1 /CLONE=IMAGE:2021353 /UG=Hs.232068 transcription factor 8 (represses interleukin 2 expression) </td> <td> AI373166 </td> <td> uncharacterized LOC100996668 /// zinc finger E-box binding homeobox 1 </td> <td> LOC100996668 /// ZEB1 </td> <td> 6935 /// 100996668 </td> <td> NM_001128128 /// NM_001174093 /// NM_001174094 /// NM_001174095 /// NM_001174096 /// NM_030751 /// NR_024285 /// NR_024286 /// NR_024287 /// XM_005252575 /// XM_005252576 /// XM_006717497 /// XM_006717498 /// XM_006717499 /// XR_158862 /// XR_159196 /// XR_171848 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010464 // regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0033081 // regulation of T cell differentiation in thymus // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048513 // organ development // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048752 // semicircular canal morphogenesis // inferred from electronic annotation /// 0051150 // regulation of smooth muscle cell differentiation // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070888 // E-box binding // inferred from sequence or structural similarity </td> <td> -41.78 </td> <td> 183.41 </td> <td> -1.30 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 209190_s_at </td> <td> 209190_s_at </td> <td> AF051782 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF051782.1 /DEF=Homo sapiens diaphanous 1 (HDIA1) mRNA, complete cds. /FEA=mRNA /GEN=HDIA1 /PROD=diaphanous 1 /DB_XREF=gi:2947237 /UG=Hs.26584 diaphanous (Drosophila, homolog) 1 /FL=gb:AF051782.1 gb:NM_005219.1 </td> <td> AF051782 </td> <td> diaphanous-related formin 1 </td> <td> DIAPH1 </td> <td> 1729 </td> <td> NM_001079812 /// NM_005219 /// XM_005268384 </td> <td> 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0016043 // cellular component organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0035372 // protein localization to microtubule // inferred from mutant phenotype /// 0051279 // regulation of release of sequestered calcium ion into cytosol // inferred from mutant phenotype /// 0071420 // cellular response to histamine // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0072686 // mitotic spindle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // non-traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005522 // profilin binding // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 28.57 </td> <td> 186.39 </td> <td> 1.30 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 209676_at </td> <td> 209676_at </td> <td> J03225 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:J03225.1 /DEF=Human lipoprotein-associated coagulation inhibitor mRNA, complete cds.  /FEA=mRNA /GEN=TFPI /DB_XREF=gi:180545 /UG=Hs.170279 tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) /FL=gb:J03225.1 gb:NM_006287.2 </td> <td> J03225 </td> <td> tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) </td> <td> TFPI </td> <td> 7035 </td> <td> NM_001032281 /// NM_006287 /// XM_005246818 /// XM_005246819 /// XM_005246820 /// XM_006712720 </td> <td> 0007596 // blood coagulation // traceable author statement /// 0007598 // blood coagulation, extrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> -75.50 </td> <td> 307.40 </td> <td> -1.30 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 205129_at </td> <td> 205129_at </td> <td> NM_006993 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006993.1 /DEF=Homo sapiens nucleophosminnucleoplasmin 3 (NPM3), mRNA. /FEA=mRNA /GEN=NPM3 /PROD=nucleophosminnucleoplasmin 3 /DB_XREF=gi:6857817 /UG=Hs.90691 nucleophosminnucleoplasmin 3 /FL=gb:AF081280.1 gb:NM_006993.1 </td> <td> NM_006993 </td> <td> nucleophosmin/nucleoplasmin 3 </td> <td> NPM3 </td> <td> 10360 </td> <td> NM_006993 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation /// 0009303 // rRNA transcription // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 26.30 </td> <td> 150.53 </td> <td> 1.30 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 206464_at </td> <td> 206464_at </td> <td> NM_001721 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001721.1 /DEF=Homo sapiens BMX non-receptor tyrosine kinase (BMX), mRNA. /FEA=mRNA /GEN=BMX /PROD=BMX non-receptor tyrosine kinase /DB_XREF=gi:4502434 /UG=Hs.27372 BMX non-receptor tyrosine kinase /FL=gb:AF045459.1 gb:NM_001721.1 </td> <td> NM_001721 </td> <td> BMX non-receptor tyrosine kinase </td> <td> BMX </td> <td> 660 </td> <td> NM_001721 /// NM_203281 /// XM_006724510 </td> <td> 0006468 // protein phosphorylation // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007498 // mesoderm development // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0032587 // ruffle membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -68.58 </td> <td> 521.06 </td> <td> -1.30 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 209329_x_at </td> <td> 209329_x_at </td> <td> BC000587 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000587.1 /DEF=Homo sapiens, clone MGC:2198, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:2198) /DB_XREF=gi:12653618 /UG=Hs.227152 mannan-binding lectin serine protease 1 (C4C2 activating component of Ra-reactive factor) /FL=gb:BC000587.1 </td> <td> BC000587 </td> <td> HIG1 hypoxia inducible domain family, member 2A </td> <td> HIGD2A </td> <td> 192286 </td> <td> NM_138820 </td> <td> 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td>  </td> <td> -29.65 </td> <td> 442.82 </td> <td> -1.30 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 222101_s_at </td> <td> 222101_s_at </td> <td> BF222893 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF222893 /FEA=EST /DB_XREF=gi:11130070 /DB_XREF=est:7q24f08.x1 /CLONE=IMAGE:3699231 /UG=Hs.9658 hypothetical protein FLJ11790 </td> <td> BF222893 </td> <td> dachsous cadherin-related 1 </td> <td> DCHS1 </td> <td> 8642 </td> <td> NM_003737 /// NM_024542 /// XM_005253207 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from sequence or structural similarity /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement /// 0022008 // neurogenesis // inferred from sequence or structural similarity /// 0035329 // hippo signaling // inferred from sequence or structural similarity </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation </td> <td> 28.15 </td> <td> 184.05 </td> <td> 1.29 </td> <td> 0.23 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 202718_at </td> <td> 202718_at </td> <td> NM_000597 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000597.1 /DEF=Homo sapiens insulin-like growth factor binding protein 2 (36kD) (IGFBP2), mRNA.  /FEA=mRNA /GEN=IGFBP2 /PROD=insulin-like growth factor binding protein 2(36kD) /DB_XREF=gi:10835156 /UG=Hs.162 insulin-like growth factor binding protein 2 (36kD) /FL=gb:NM_000597.1 gb:BC004312.1 gb:M35410.1 </td> <td> NM_000597 </td> <td> insulin-like growth factor binding protein 2, 36kDa </td> <td> IGFBP2 </td> <td> 3485 </td> <td> NM_000597 </td> <td> 0001558 // regulation of cell growth // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043567 // regulation of insulin-like growth factor receptor signaling pathway // inferred by curator /// 0043567 // regulation of insulin-like growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0043627 // response to estrogen // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048545 // response to steroid hormone // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from direct assay /// 0031995 // insulin-like growth factor II binding // inferred from sequence or structural similarity </td> <td> 31.63 </td> <td> 205.21 </td> <td> 1.29 </td> <td> 0.24 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 209282_at </td> <td> 209282_at </td> <td> AF309082 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF309082.1 /DEF=Homo sapiens protein kinase D2 mRNA, complete cds. /FEA=mRNA /PROD=protein kinase D2 /DB_XREF=gi:12659006 /UG=Hs.91146 protein kinase D2 /FL=gb:AF309082.1 gb:AF151021.1 gb:NM_016457.1 </td> <td> AF309082 </td> <td> protein kinase D2 </td> <td> PRKD2 </td> <td> 25865 </td> <td> NM_001079880 /// NM_001079881 /// NM_001079882 /// NM_016457 /// XM_005258716 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from genetic interaction /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0002376 // immune system process // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0008219 // cell death // inferred from mutant phenotype /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0032743 // positive regulation of interleukin-2 production // inferred from sequence or structural similarity /// 0032757 // positive regulation of interleukin-8 production // inferred from mutant phenotype /// 0032793 // positive regulation of CREB transcription factor activity // inferred from genetic interaction /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from genetic interaction /// 0035556 // intracellular signal transduction // inferred from genetic interaction /// 0035556 // intracellular signal transduction // inferred from mutant phenotype /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from genetic interaction /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0038033 // positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway // inferred from genetic interaction /// 0038033 // positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from genetic interaction /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0045743 // positive regulation of fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from genetic interaction /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045785 // positive regulation of cell adhesion // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0050862 // positive regulation of T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0061154 // endothelial tube morphogenesis // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 1901727 // positive regulation of histone deacetylase activity // inferred from genetic interaction /// 1902533 // positive regulation of intracellular signal transduction // inferred from mutant phenotype /// 2000573 // positive regulation of DNA biosynthetic process // inferred from sequence or structural similarity /// 2001028 // positive regulation of endothelial cell chemotaxis // inferred from mutant phenotype </td> <td> 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -27.85 </td> <td> 136.38 </td> <td> -1.29 </td> <td> 0.24 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 222065_s_at </td> <td> 222065_s_at </td> <td> AI830227 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI830227 /FEA=EST /DB_XREF=gi:5450887 /DB_XREF=est:wj78g07.x1 /CLONE=IMAGE:2408988 /UG=Hs.83849 flightless I (Drosophila) homolog </td> <td> AI830227 </td> <td> flightless I homolog (Drosophila) </td> <td> FLII </td> <td> 2314 </td> <td> NM_001256264 /// NM_001256265 /// NM_002018 /// XM_005256555 /// XM_005256556 /// XM_005256558 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -19.68 </td> <td> 154.41 </td> <td> -1.29 </td> <td> 0.24 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 217815_at </td> <td> 217815_at </td> <td> NM_007192 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007192.1 /DEF=Homo sapiens chromatin-specific transcription elongation factor, 140 kDa subunit (FACTP140), mRNA.  /FEA=mRNA /GEN=FACTP140 /PROD=chromatin-specific transcription elongationfactor, 140 kDa subunit /DB_XREF=gi:6005756 /UG=Hs.14963 chromatin-specific transcription elongation factor, 140 kDa subunit /FL=gb:AF152961.1 gb:NM_007192.1 </td> <td> NM_007192 </td> <td> suppressor of Ty 16 homolog (S. cerevisiae) </td> <td> SUPT16H </td> <td> 11198 </td> <td> NM_007192 </td> <td> 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006337 // nucleosome disassembly // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0032786 // positive regulation of DNA-templated transcription, elongation // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 54.48 </td> <td> 378.06 </td> <td> 1.29 </td> <td> 0.24 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 218561_s_at </td> <td> 218561_s_at </td> <td> NM_020408 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020408.1 /DEF=Homo sapiens CGI-203 protein (CGI-203), mRNA. /FEA=mRNA /GEN=CGI-203 /PROD=CGI-203 protein /DB_XREF=gi:9966892 /UG=Hs.184860 CGI-203 protein /FL=gb:AF285118.1 gb:NM_020408.1 </td> <td> NM_020408 </td> <td> LYR motif containing 4 </td> <td> LYRM4 </td> <td> 57128 </td> <td> NM_001164840 /// NM_001164841 /// NM_020408 /// NR_104417 /// NR_104418 /// XM_005249237 /// XM_005249239 /// XM_006715151 </td> <td> 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement </td> <td>  </td> <td> 18.57 </td> <td> 171.96 </td> <td> 1.29 </td> <td> 0.24 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 202789_at </td> <td> 202789_at </td> <td> AL022394 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL022394 /DEF=Human DNA sequence from clone RP3-511B24 on chromosome 20q11.2-12. Contains the 3 end of the TOP1 gene for topoisomerase (DNA) I, the PLCG1 gene for phospholipase C gamma 1, gene KIAA0395 for a possible homeobox protein, a 60S Ribosomal Protein L... /FEA=mRNA_1 /DB_XREF=gi:11345540 /UG=Hs.268177 phospholipase C, gamma 1 (formerly subtype 148) /FL=gb:M34667.1 gb:NM_002660.1 </td> <td> AL022394 </td> <td> phospholipase C, gamma 1 </td> <td> PLCG1 </td> <td> 5335 </td> <td> NM_002660 /// NM_182811 /// XM_005260438 /// XR_244143 </td> <td> 0000186 // activation of MAPKK activity // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from mutant phenotype /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009395 // phospholipid catabolic process // inferred from electronic annotation /// 0010634 // positive regulation of epithelial cell migration // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019722 // calcium-mediated signaling // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from mutant phenotype /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from direct assay /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from mutant phenotype </td> <td> 0001726 // ruffle // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0008180 // COP9 signalosome // inferred from direct assay /// 0030027 // lamellipodium // inferred from direct assay /// 0042995 // cell projection // inferred from direct assay </td> <td> 0004435 // phosphatidylinositol phospholipase C activity // inferred from direct assay /// 0004435 // phosphatidylinositol phospholipase C activity // traceable author statement /// 0004629 // phospholipase C activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // non-traceable author statement /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation /// 0035254 // glutamate receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 25.10 </td> <td> 126.40 </td> <td> 1.29 </td> <td> 0.24 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 219968_at </td> <td> 219968_at </td> <td> NM_016089 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016089.1 /DEF=Homo sapiens KRAB-zinc finger protein SZF1-1 (SZF1), mRNA. /FEA=mRNA /GEN=SZF1 /PROD=KRAB-zinc finger protein SZF1-1 /DB_XREF=gi:7706726 /UG=Hs.19585 KRAB-zinc finger protein SZF1-1 /FL=gb:AF114816.1 gb:NM_016089.1 </td> <td> NM_016089 </td> <td> zinc finger protein 589 </td> <td> ZNF589 </td> <td> 51385 </td> <td> NM_016089 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 20.55 </td> <td> 58.50 </td> <td> 1.29 </td> <td> 0.24 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 210815_s_at </td> <td> 210815_s_at </td> <td> U17473 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U17473.1 /DEF=Human calcitonin-like receptor mRNA, complete cds. /FEA=mRNA /PROD=calcitonin-like receptor /DB_XREF=gi:662328 /UG=Hs.152175 calcitonin receptor-like /FL=gb:U17473.1 </td> <td> U17473 </td> <td> calcitonin receptor-like </td> <td> CALCRL </td> <td> 10203 </td> <td> NM_001271751 /// NM_005795 /// XM_005246231 /// XM_005246232 /// XM_005246234 </td> <td> 0001525 // angiogenesis // inferred from direct assay /// 0006171 // cAMP biosynthetic process // inferred from direct assay /// 0006816 // calcium ion transport // inferred from direct assay /// 0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0015031 // protein transport // inferred from direct assay /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0031623 // receptor internalization // inferred from direct assay /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0071329 // cellular response to sucrose stimulus // inferred from direct assay </td> <td> 0005764 // lysosome // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0001605 // adrenomedullin receptor activity // inferred from direct assay /// 0001635 // calcitonin gene-related polypeptide receptor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004948 // calcitonin receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from direct assay </td> <td> -37.70 </td> <td> 273.57 </td> <td> -1.29 </td> <td> 0.24 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 202707_at </td> <td> 202707_at </td> <td> NM_000373 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000373.1 /DEF=Homo sapiens uridine monophosphate synthetase (orotate phosphoribosyl transferase and orotidine-5-decarboxylase) (UMPS), mRNA.  /FEA=mRNA /GEN=UMPS /PROD=uridine monophosphate synthetase (orotatephosphoribosyl transferase andorotidine-5-decarboxylase) /DB_XREF=gi:4507834 /UG=Hs.2057 uridine monophosphate synthetase (orotate phosphoribosyl transferase and orotidine-5-decarboxylase) /FL=gb:BC000364.1 gb:D86227.1 gb:D86228.1 gb:D86230.1 gb:J03626.1 gb:NM_000373.1 </td> <td> NM_000373 </td> <td> uridine monophosphate synthetase </td> <td> UMPS </td> <td> 7372 </td> <td> NM_000373 /// NR_033434 /// NR_033437 </td> <td> 0006206 // pyrimidine nucleobase metabolic process // traceable author statement /// 0006207 // 'de novo' pyrimidine nucleobase biosynthetic process // inferred from electronic annotation /// 0006221 // pyrimidine nucleotide biosynthetic process // inferred from electronic annotation /// 0006222 // UMP biosynthetic process // inferred from direct assay /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0044205 // 'de novo' UMP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004588 // orotate phosphoribosyltransferase activity // inferred from direct assay /// 0004588 // orotate phosphoribosyltransferase activity // traceable author statement /// 0004590 // orotidine-5'-phosphate decarboxylase activity // inferred from direct assay /// 0004590 // orotidine-5'-phosphate decarboxylase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation </td> <td> 17.27 </td> <td> 32.36 </td> <td> 1.29 </td> <td> 0.24 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201116_s_at </td> <td> 201116_s_at </td> <td> AI922855 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI922855 /FEA=EST /DB_XREF=gi:5658819 /DB_XREF=est:wo14h05.x1 /CLONE=IMAGE:2455353 /UG=Hs.75360 carboxypeptidase E /FL=gb:NM_001873.1 </td> <td> AI922855 </td> <td> carboxypeptidase E </td> <td> CPE </td> <td> 1363 </td> <td> NM_001873 </td> <td> 0003214 // cardiac left ventricle morphogenesis // inferred from mutant phenotype /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // non-traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0030070 // insulin processing // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0072657 // protein localization to membrane // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0030667 // secretory granule membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004180 // carboxypeptidase activity // traceable author statement /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042043 // neurexin family protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from physical interaction </td> <td> 15.15 </td> <td> 37.12 </td> <td> 1.29 </td> <td> 0.24 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 215952_s_at </td> <td> 215952_s_at </td> <td> AF090094 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF090094.1 /DEF=Homo sapiens clone IMAGE 172979. /FEA=mRNA /DB_XREF=gi:4063629 /UG=Hs.125078 ornithine decarboxylase antizyme 1 </td> <td> AF090094 </td> <td> ornithine decarboxylase antizyme 1 </td> <td> OAZ1 </td> <td> 4946 </td> <td> NM_004152 </td> <td> 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0045732 // positive regulation of protein catabolic process // inferred from sequence or structural similarity </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0008073 // ornithine decarboxylase inhibitor activity // inferred from electronic annotation </td> <td> -114.78 </td> <td> 1349.44 </td> <td> -1.29 </td> <td> 0.24 </td> <td> 0.31 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200687_s_at </td> <td> 200687_s_at </td> <td> NM_012426 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012426.1 /DEF=Homo sapiens splicing factor 3b, subunit 3, 130kD (SF3B3), mRNA. /FEA=mRNA /GEN=SF3B3 /PROD=splicing factor 3b, subunit 3, 130kD /DB_XREF=gi:11034822 /UG=Hs.195614 splicing factor 3b, subunit 3, 130kD /FL=gb:NM_012426.1 gb:BC000463.1 gb:BC003146.1 gb:D13642.1 gb:D87686.1 </td> <td> NM_012426 </td> <td> splicing factor 3b, subunit 3, 130kDa </td> <td> SF3B3 </td> <td> 23450 </td> <td> NM_012426 </td> <td> 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 25.15 </td> <td> 191.35 </td> <td> 1.28 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 221675_s_at </td> <td> 221675_s_at </td> <td> AF195624 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF195624.1 /DEF=Homo sapiens cholinephosphotransferase 1 beta mRNA, complete cds. /FEA=mRNA /PROD=cholinephosphotransferase 1 beta /DB_XREF=gi:9502012 /UG=Hs.171889 cholinephosphotransferase 1 /FL=gb:AF195624.1 </td> <td> AF195624 </td> <td> choline phosphotransferase 1 </td> <td> CHPT1 </td> <td> 56994 </td> <td> NM_020244 /// XM_005269036 /// XR_245946 </td> <td> 0001558 // regulation of cell growth // non-traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006656 // phosphatidylcholine biosynthetic process // inferred from direct assay /// 0006656 // phosphatidylcholine biosynthetic process // traceable author statement /// 0006657 // CDP-choline pathway // non-traceable author statement /// 0006663 // platelet activating factor biosynthetic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // non-traceable author statement </td> <td> 0004142 // diacylglycerol cholinephosphotransferase activity // inferred from direct assay /// 0004142 // diacylglycerol cholinephosphotransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016780 // phosphotransferase activity, for other substituted phosphate groups // inferred from electronic annotation /// 0019992 // diacylglycerol binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 24.28 </td> <td> 201.74 </td> <td> 1.28 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 217772_s_at </td> <td> 217772_s_at </td> <td> NM_014342 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014342.1 /DEF=Homo sapiens mitochondrial carrier homolog 2 (MTCH2), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=MTCH2 /PROD=mitochondrial carrier homolog 2 /DB_XREF=gi:7657346 /UG=Hs.279609 mitochondrial carrier homolog 2 /FL=gb:BC000875.1 gb:AF085361.1 gb:AF176008.1 gb:NM_014342.1 </td> <td> NM_014342 </td> <td> mitochondrial carrier 2 </td> <td> MTCH2 </td> <td> 23788 </td> <td> NM_014342 /// XM_005252841 /// XM_006718172 /// XM_006718173 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0070585 // protein localization to mitochondrion // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> -61.47 </td> <td> 479.81 </td> <td> -1.28 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 221509_at </td> <td> 221509_at </td> <td> AB014731 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB014731.1 /DEF=Homo sapiens mRNA for SMAP-3, complete cds. /FEA=mRNA /GEN=smap-3 /PROD=SMAP-3 /DB_XREF=gi:12248760 /UG=Hs.22393 density-regulated protein /FL=gb:AB014731.1 </td> <td> AB014731 </td> <td> density-regulated protein </td> <td> DENR </td> <td> 8562 </td> <td> NM_003677 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from direct assay /// 0002192 // IRES-dependent translational initiation // inferred from direct assay /// 0006413 // translational initiation // inferred from electronic annotation /// 0032790 // ribosome disassembly // inferred from direct assay </td> <td>  </td> <td> 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 22.25 </td> <td> 312.23 </td> <td> 1.28 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 208708_x_at </td> <td> 208708_x_at </td> <td> AL080102 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL080102.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564N1916 (from clone DKFZp564N1916); complete cds.  /FEA=mRNA /GEN=DKFZp564N1916 /PROD=hypothetical protein /DB_XREF=gi:5262526 /UG=Hs.286236 eukaryotic translation initiation factor 5 /FL=gb:AL080102.1 </td> <td> AL080102 </td> <td> eukaryotic translation initiation factor 5 </td> <td> EIF5 </td> <td> 1983 </td> <td> NM_001969 /// NM_183004 </td> <td> 0006184 // GTP catabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // non-traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // non-traceable author statement /// 0003924 // GTPase activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 30.82 </td> <td> 266.41 </td> <td> 1.27 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 208668_x_at </td> <td> 208668_x_at </td> <td> BC003689 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003689.1 /DEF=Homo sapiens, high-mobility group (nonhistone chromosomal) protein 17, clone MGC:5301, mRNA, complete cds.  /FEA=mRNA /PROD=high-mobility group (nonhistone chromosomal)protein 17 /DB_XREF=gi:13277559 /UG=Hs.181163 high-mobility group (nonhistone chromosomal) protein 17 /FL=gb:BC003689.1 gb:M12623.1 </td> <td> BC003689 </td> <td> high mobility group nucleosomal binding domain 2 </td> <td> HMGN2 </td> <td> 3151 </td> <td> NM_005517 </td> <td> 0006325 // chromatin organization // non-traceable author statement /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0031492 // nucleosomal DNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 99.78 </td> <td> 1448.04 </td> <td> 1.27 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203552_at </td> <td> 203552_at </td> <td> AW298170 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW298170 /FEA=EST /DB_XREF=gi:6704806 /DB_XREF=est:UI-H-BW0-ajt-a-06-0-UI.s1 /CLONE=IMAGE:2732819 /UG=Hs.246970 mitogen-activated protein kinase kinase kinase kinase 5 /FL=gb:U77129.1 gb:NM_006575.1 </td> <td> AW298170 </td> <td> mitogen-activated protein kinase kinase kinase kinase 5 </td> <td> MAP4K5 </td> <td> 11183 </td> <td> NM_006575 /// NM_198794 /// XM_006720013 /// XM_006720014 </td> <td> 0000165 // MAPK cascade //  /// 0000185 // activation of MAPKKK activity //  /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0050790 // regulation of catalytic activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008349 // MAP kinase kinase kinase kinase activity //  /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -23.50 </td> <td> 130.32 </td> <td> -1.27 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 202462_s_at </td> <td> 202462_s_at </td> <td> NM_014829 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014829.1 /DEF=Homo sapiens KIAA0801 gene product (KIAA0801), mRNA. /FEA=mRNA /GEN=KIAA0801 /PROD=KIAA0801 gene product /DB_XREF=gi:7662317 /UG=Hs.17585 KIAA0801 gene product /FL=gb:AB018344.1 gb:NM_014829.1 </td> <td> NM_014829 </td> <td> DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 </td> <td> DDX46 </td> <td> 9879 </td> <td> NM_014829 /// XM_005272142 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -39.68 </td> <td> 294.41 </td> <td> -1.27 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203395_s_at </td> <td> 203395_s_at </td> <td> NM_005524 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005524.2 /DEF=Homo sapiens hairy (Drosophila)-homolog (HRY), mRNA. /FEA=mRNA /GEN=HRY /PROD=hairy (Drosophila)-homolog /DB_XREF=gi:8400709 /UG=Hs.250666 hairy (Drosophila)-homolog /FL=gb:AF264785.1 gb:NM_005524.2 </td> <td> NM_005524 </td> <td> hes family bHLH transcription factor 1 </td> <td> HES1 </td> <td> 3280 </td> <td> NM_005524 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003143 // embryonic heart tube morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003266 // regulation of secondary heart field cardioblast proliferation // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007262 // STAT protein import into nucleus // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0016477 // cell migration // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021557 // oculomotor nerve development // inferred from electronic annotation /// 0021558 // trochlear nerve development // inferred from electronic annotation /// 0021575 // hindbrain morphogenesis // inferred from electronic annotation /// 0021861 // forebrain radial glial cell differentiation // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035909 // aorta morphogenesis // inferred from electronic annotation /// 0035910 // ascending aorta morphogenesis // inferred from sequence or structural similarity /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from sequence or structural similarity /// 0042668 // auditory receptor cell fate determination // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from sequence or structural similarity /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045598 // regulation of fat cell differentiation // inferred from electronic annotation /// 0045608 // negative regulation of auditory receptor cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045977 // positive regulation of mitotic cell cycle, embryonic // inferred from sequence or structural similarity /// 0046331 // lateral inhibition // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0048469 // cell maturation // inferred from electronic annotation /// 0048505 // regulation of timing of cell differentiation // inferred from electronic annotation /// 0048538 // thymus development // inferred from sequence or structural similarity /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from sequence or structural similarity /// 0060164 // regulation of timing of neuron differentiation // inferred from electronic annotation /// 0060253 // negative regulation of glial cell proliferation // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060675 // ureteric bud morphogenesis // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0061009 // common bile duct development // inferred from electronic annotation /// 0061106 // negative regulation of stomach neuroendocrine cell differentiation // inferred from electronic annotation /// 0061309 // cardiac neural crest cell development involved in outflow tract morphogenesis // inferred from sequence or structural similarity /// 0061626 // pharyngeal arch artery morphogenesis // inferred from sequence or structural similarity /// 0072012 // glomerulus vasculature development // inferred from electronic annotation /// 0072049 // comma-shaped body morphogenesis // inferred from electronic annotation /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072141 // renal interstitial cell development // inferred from electronic annotation /// 0072282 // metanephric nephron tubule morphogenesis // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation /// 0097084 // vascular smooth muscle cell development // inferred from sequence or structural similarity /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 2000227 // negative regulation of pancreatic A cell differentiation // inferred from electronic annotation /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype /// 2000974 // negative regulation of pro-B cell differentiation // inferred from mutant phenotype /// 2000978 // negative regulation of forebrain neuron differentiation // inferred from sequence or structural similarity /// 2000981 // negative regulation of inner ear receptor cell differentiation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0071820 // N-box binding // inferred from sequence or structural similarity </td> <td> -21.85 </td> <td> 125.68 </td> <td> -1.27 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 216620_s_at </td> <td> 216620_s_at </td> <td> AF009205 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF009205.1 /DEF=Homo sapiens clone L5 unknown mRNA, partial cds. /FEA=mRNA /PROD=unknown /DB_XREF=gi:2454511 /UG=Hs.20695 Rho guanine nucleotide exchange factor (GEF) 10 </td> <td> AF009205 </td> <td> Rho guanine nucleotide exchange factor (GEF) 10 </td> <td> ARHGEF10 </td> <td> 9639 </td> <td> NM_014629 /// XM_005266039 /// XM_005266040 /// XM_005266041 /// XM_005266042 /// XM_006716238 /// XM_006716239 /// XM_006716240 /// XM_006716241 /// XM_006725104 /// XM_006725105 /// XM_006725106 /// XM_006725107 /// XM_006725108 /// XM_006725109 /// XM_006725110 /// XM_006725111 </td> <td> 0022011 // myelination in peripheral nervous system // inferred from mutant phenotype /// 0032319 // regulation of Rho GTPase activity // inferred from direct assay /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0033126 // positive regulation of GTP catabolic process // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051298 // centrosome duplication // inferred from mutant phenotype /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0090307 // spindle assembly involved in mitosis // inferred from mutant phenotype </td> <td> 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from physical interaction </td> <td> 27.42 </td> <td> 146.64 </td> <td> 1.27 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 202636_at </td> <td> 202636_at </td> <td> NM_005667 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005667.1 /DEF=Homo sapiens zinc finger protein homologous to Zfp103 in mouse (ZFP103), mRNA.  /FEA=mRNA /GEN=ZFP103 /PROD=zinc finger protein homologous to Zfp103 inmouse /DB_XREF=gi:5031824 /UG=Hs.155968 zinc finger protein homologous to Zfp103 in mouse /FL=gb:D76444.1 gb:NM_005667.1 </td> <td> NM_005667 </td> <td> ring finger protein 103 </td> <td> RNF103 </td> <td> 7844 </td> <td> NM_001198951 /// NM_001198952 /// NM_005667 </td> <td> 0007417 // central nervous system development // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -35.50 </td> <td> 247.65 </td> <td> -1.27 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 209120_at </td> <td> 209120_at </td> <td> AL037401 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL037401 /FEA=EST /DB_XREF=gi:5406798 /DB_XREF=est:DKFZp564K1671_s1 /CLONE=DKFZp564K1671 /UG=Hs.288869 nuclear receptor subfamily 2, group F, member 2 /FL=gb:M64497.1 </td> <td> AL037401 </td> <td> nuclear receptor subfamily 2, group F, member 2 </td> <td> NR2F2 </td> <td> 7026 </td> <td> NM_001145155 /// NM_001145156 /// NM_001145157 /// NM_021005 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001893 // maternal placenta development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009956 // radial pattern formation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010596 // negative regulation of endothelial cell migration // inferred from mutant phenotype /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0021796 // cerebral cortex regionalization // inferred from electronic annotation /// 0030522 // intracellular receptor signaling pathway // inferred from direct assay /// 0030522 // intracellular receptor signaling pathway // inferred from electronic annotation /// 0030522 // intracellular receptor signaling pathway // traceable author statement /// 0030900 // forebrain development // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0060707 // trophoblast giant cell differentiation // inferred from electronic annotation /// 0060849 // regulation of transcription involved in lymphatic endothelial cell fate commitment // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0001972 // retinoic acid binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044323 // retinoic acid-responsive element binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 39.80 </td> <td> 615.02 </td> <td> 1.27 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 209953_s_at </td> <td> 209953_s_at </td> <td> U63131 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U63131.1 /DEF=Human CDC37 homolog mRNA, complete cds. /FEA=mRNA /PROD=CDC37 homolog /DB_XREF=gi:1421820 /UG=Hs.160958 CDC37 (cell division cycle 37, S. cerevisiae, homolog) /FL=gb:BC000083.1 gb:U43077.1 gb:U63131.1 gb:NM_007065.1 </td> <td> U63131 </td> <td> cell division cycle 37 </td> <td> CDC37 </td> <td> 11140 </td> <td> NM_007065 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0006605 // protein targeting // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // inferred from mutant phenotype /// 0060338 // regulation of type I interferon-mediated signaling pathway // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation /// 0043422 // protein kinase B binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement /// 0051087 // chaperone binding // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from electronic annotation </td> <td> -48.70 </td> <td> 252.95 </td> <td> -1.27 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 216207_x_at </td> <td> 216207_x_at </td> <td> AW408194 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW408194 /FEA=EST /DB_XREF=gi:6927251 /DB_XREF=est:UI-HF-BL0-abw-b-10-0-UI.r1 /CLONE=IMAGE:3057763 /UG=Hs.37089 immunoglobulin kappa variable 1-13 </td> <td> AW408194 </td> <td> immunoglobulin kappa constant </td> <td> IGKC </td> <td> 3514 </td> <td>  </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0006955 // immune response // non-traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0003823 // antigen binding // non-traceable author statement </td> <td> -21.80 </td> <td> 41.50 </td> <td> -1.27 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 221269_s_at </td> <td> 221269_s_at </td> <td> NM_031286 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031286.1 /DEF=Homo sapiens SH3BGRL3-like protein (SH3BGRL3), mRNA. /FEA=mRNA /GEN=SH3BGRL3 /PROD=SH3BGRL3-like protein /DB_XREF=gi:13775197 /FL=gb:NM_031286.1 </td> <td> NM_031286 </td> <td> SH3 domain binding glutamate-rich protein like 3 </td> <td> SH3BGRL3 </td> <td> 83442 </td> <td> NM_031286 </td> <td> 0030834 // regulation of actin filament depolymerization // inferred from mutant phenotype /// 0032321 // positive regulation of Rho GTPase activity // inferred from mutant phenotype /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005100 // Rho GTPase activator activity // inferred from mutant phenotype /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0030215 // semaphorin receptor binding // inferred from physical interaction </td> <td> 50.42 </td> <td> 589.41 </td> <td> 1.27 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 39729_at </td> <td> 39729_at </td> <td> L19185 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. L19185:Human natural killer cell enhancing factor (NKEFB) mRNA, complete cds /cds=(124,720) /gb=L19185 /gi=440307 /ug=Hs.146354 /len=980 </td> <td> L19185 </td> <td> peroxiredoxin 2 </td> <td> PRDX2 </td> <td> 7001 </td> <td> NM_005809 /// NM_181737 /// NM_181738 </td> <td> 0006979 // response to oxidative stress // inferred from mutant phenotype /// 0006979 // response to oxidative stress // non-traceable author statement /// 0019430 // removal of superoxide radicals // inferred from direct assay /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0042744 // hydrogen peroxide catabolic process // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004601 // peroxidase activity // inferred from electronic annotation /// 0008379 // thioredoxin peroxidase activity // inferred from direct assay /// 0008379 // thioredoxin peroxidase activity // traceable author statement /// 0016209 // antioxidant activity // inferred from direct assay /// 0016209 // antioxidant activity // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0051920 // peroxiredoxin activity // inferred from electronic annotation </td> <td> 22.40 </td> <td> 385.93 </td> <td> 1.27 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 217835_x_at </td> <td> 217835_x_at </td> <td> NM_018840 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018840.1 /DEF=Homo sapiens putative Rab5-interacting protein (LOC55969), mRNA. /FEA=mRNA /GEN=LOC55969 /PROD=putative Rab5-interacting protein /DB_XREF=gi:10047115 /UG=Hs.184062 putative Rab5-interacting protein /FL=gb:NM_018840.1 gb:AF274936.1 gb:AF112213.1 </td> <td> NM_018840 </td> <td> chromosome 20 open reading frame 24 /// TGIF2-C20orf24 readthrough </td> <td> C20orf24 /// TGIF2-C20orf24 </td> <td> 55969 /// 100527943 </td> <td> NM_001199534 /// NM_001199535 /// NM_018840 /// NM_199483 /// NM_199484 /// NM_199485 /// NR_026562 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 47.98 </td> <td> 771.59 </td> <td> 1.26 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201864_at </td> <td> 201864_at </td> <td> NM_001493 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001493.1 /DEF=Homo sapiens GDP dissociation inhibitor 1 (GDI1), mRNA. /FEA=mRNA /GEN=GDI1 /PROD=GDP dissociation inhibitor 1 /DB_XREF=gi:4503970 /UG=Hs.74576 GDP dissociation inhibitor 1 /FL=gb:BC000317.1 gb:NM_001493.1 gb:D45021.1 </td> <td> NM_001493 </td> <td> GDP dissociation inhibitor 1 </td> <td> GDI1 </td> <td> 2664 </td> <td> NM_001493 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0032482 // Rab protein signal transduction // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from sequence or structural similarity /// 0050790 // regulation of catalytic activity // inferred from sequence or structural similarity /// 0050790 // regulation of catalytic activity // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0090315 // negative regulation of protein targeting to membrane // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030496 // midbody // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0005092 // GDP-dissociation inhibitor activity // traceable author statement /// 0005093 // Rab GDP-dissociation inhibitor activity // inferred from sequence or structural similarity /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from electronic annotation </td> <td> 53.83 </td> <td> 350.99 </td> <td> 1.26 </td> <td> 0.24 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 208807_s_at </td> <td> 208807_s_at </td> <td> U91543 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U91543.1 /DEF=Homo sapiens zinc-finger helicase (hZFH) mRNA, complete cds. /FEA=mRNA /GEN=hZFH /PROD=zinc-finger helicase /DB_XREF=gi:3298561 /UG=Hs.25601 chromodomain helicase DNA binding protein 3 /FL=gb:U91543.1 </td> <td> U91543 </td> <td> chromodomain helicase DNA binding protein 3 </td> <td> CHD3 </td> <td> 1107 </td> <td> NM_001005271 /// NM_001005273 /// NM_005852 /// XM_005256427 /// XM_005256428 /// XM_005256429 /// XM_005256431 /// XM_006721423 /// XM_006721424 /// XM_006721425 /// XM_006721426 /// XM_006721427 /// XM_006721428 /// XM_006721429 /// XM_006721430 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006325 // chromatin organization // inferred from electronic annotation /// 0006333 // chromatin assembly or disassembly // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007051 // spindle organization // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement /// 0051297 // centrosome organization // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016581 // NuRD complex // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004386 // helicase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 18.98 </td> <td> 222.64 </td> <td> 1.26 </td> <td> 0.25 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 213258_at </td> <td> 213258_at </td> <td> BF511231 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF511231 /FEA=EST /DB_XREF=gi:11594529 /DB_XREF=est:UI-H-BI4-aoi-g-11-0-UI.s1 /CLONE=IMAGE:3085244 /UG=Hs.288582 ESTs, Weakly similar to ubiquitous TPR motif, Y isoform H.sapiens </td> <td> BF511231 </td> <td> tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) </td> <td> TFPI </td> <td> 7035 </td> <td> NM_001032281 /// NM_006287 /// XM_005246818 /// XM_005246819 /// XM_005246820 /// XM_006712720 </td> <td> 0007596 // blood coagulation // traceable author statement /// 0007598 // blood coagulation, extrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> -83.10 </td> <td> 726.73 </td> <td> -1.26 </td> <td> 0.25 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 203113_s_at </td> <td> 203113_s_at </td> <td> NM_001960 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001960.1 /DEF=Homo sapiens eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) (EEF1D), mRNA.  /FEA=mRNA /GEN=EEF1D /PROD=eukaryotic translation elongation factor 1 delta(guanine nucleotide exchange protein) /DB_XREF=gi:4503478 /UG=Hs.223241 eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) /FL=gb:NM_001960.1 </td> <td> NM_001960 </td> <td> eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) </td> <td> EEF1D </td> <td> 1936 </td> <td> NM_001130053 /// NM_001130054 /// NM_001130055 /// NM_001130056 /// NM_001130057 /// NM_001195203 /// NM_001289950 /// NM_001960 /// NM_032378 /// XM_005250820 /// XM_005250821 /// XM_005250823 /// XM_005250824 /// XM_005250825 /// XM_005250826 /// XM_006716519 /// XM_006716520 /// XM_006716521 /// XM_006716522 /// XM_006716523 /// XM_006716524 /// XM_006716525 /// XM_006725064 /// XM_006725065 /// XM_006725066 /// XM_006725067 /// XM_006725068 /// XM_006725069 /// XM_006725070 /// XM_006725071 /// XM_006725072 /// XM_006725073 /// XM_006725074 /// XM_006725075 /// XM_006725076 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005853 // eukaryotic translation elongation factor 1 complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement </td> <td> -92.63 </td> <td> 774.81 </td> <td> -1.26 </td> <td> 0.25 </td> <td> 0.32 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200877_at </td> <td> 200877_at </td> <td> NM_006430 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006430.1 /DEF=Homo sapiens chaperonin containing TCP1, subunit 4 (delta) (CCT4), mRNA.  /FEA=mRNA /GEN=CCT4 /PROD=chaperonin containing TCP1, subunit 4 (delta) /DB_XREF=gi:5453604 /UG=Hs.79150 chaperonin containing TCP1, subunit 4 (delta) /FL=gb:U38846.1 gb:AF026291.1 gb:NM_006430.1 </td> <td> NM_006430 </td> <td> chaperonin containing TCP1, subunit 4 (delta) </td> <td> CCT4 </td> <td> 10575 </td> <td> NM_001256721 /// NM_006430 </td> <td> 0006457 // protein folding // traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0002199 // zona pellucida receptor complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 150.70 </td> <td> 1384.30 </td> <td> 1.26 </td> <td> 0.25 </td> <td> 0.33 </td> <td> -4.58 </td> </tr>
  <tr> <td> 212096_s_at </td> <td> 212096_s_at </td> <td> AL096842 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL096842.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586D1519 (from clone DKFZp586D1519). /FEA=mRNA /DB_XREF=gi:5524930 /UG=Hs.7946 KIAA1288 protein </td> <td> AL096842 </td> <td> microtubule associated tumor suppressor 1 </td> <td> MTUS1 </td> <td> 57509 </td> <td> NM_001001924 /// NM_001001925 /// NM_001001927 /// NM_001001931 /// NM_001166393 /// NM_020749 /// XM_005273577 /// XM_005273578 /// XM_005273579 /// XM_005273580 /// XM_005273581 /// XM_005273582 /// XM_005273583 /// XR_247126 </td> <td> 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td>  </td> <td> 131.85 </td> <td> 891.02 </td> <td> 1.25 </td> <td> 0.25 </td> <td> 0.33 </td> <td> -4.58 </td> </tr>
  <tr> <td> 210835_s_at </td> <td> 210835_s_at </td> <td> AF222711 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF222711.1 /DEF=Homo sapiens ribeye mRNA, complete cds. /FEA=mRNA /PROD=ribeye /DB_XREF=gi:12034652 /UG=Hs.171391 C-terminal binding protein 2 /FL=gb:AF222711.1 gb:NM_022802.1 </td> <td> AF222711 </td> <td> C-terminal binding protein 2 </td> <td> CTBP2 </td> <td> 1488 </td> <td> NM_001083914 /// NM_001290214 /// NM_001290215 /// NM_001329 /// NM_022802 /// XM_005269561 /// XM_005269562 /// XM_005269563 /// XM_005269564 /// XM_005269565 /// XM_005269567 /// XM_005269568 /// XM_005269569 /// XM_005269570 /// XM_005269571 /// XM_005269572 /// XM_006717641 /// XM_006717642 /// XM_006717643 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 66.63 </td> <td> 456.69 </td> <td> 1.25 </td> <td> 0.25 </td> <td> 0.33 </td> <td> -4.58 </td> </tr>
  <tr> <td> 218495_at </td> <td> 218495_at </td> <td> NM_004182 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004182.1 /DEF=Homo sapiens ubiquitously-expressed transcript (UXT), mRNA. /FEA=mRNA /GEN=UXT /PROD=ubiquitously-expressed transcript /DB_XREF=gi:4759297 /UG=Hs.172791 ubiquitously-expressed transcript /FL=gb:BC000720.1 gb:AF092737.1 gb:NM_004182.1 gb:AF083241.1 gb:AF083242.1 </td> <td> NM_004182 </td> <td> ubiquitously-expressed, prefoldin-like chaperone </td> <td> UXT </td> <td> 8409 </td> <td> NM_004182 /// NM_153477 /// NR_045559 /// NR_045560 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0047497 // mitochondrion transport along microtubule // traceable author statement /// 0051297 // centrosome organization // inferred from mutant phenotype </td> <td> 0000930 // gamma-tubulin complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005856 // cytoskeleton // inferred from direct assay /// 0016272 // prefoldin complex // inferred from electronic annotation </td> <td> 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // traceable author statement /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 18.62 </td> <td> 292.96 </td> <td> 1.25 </td> <td> 0.25 </td> <td> 0.33 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200959_at </td> <td> 200959_at </td> <td> NM_004960 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004960.1 /DEF=Homo sapiens fusion, derived from t(12;16) malignant liposarcoma (FUS), mRNA.  /FEA=mRNA /GEN=FUS /PROD=fusion, derived from t(12;16) malignantliposarcoma /DB_XREF=gi:4826733 /UG=Hs.99969 fusion, derived from t(12;16) malignant liposarcoma /FL=gb:BC000402.1 gb:BC002459.1 gb:NM_004960.1 </td> <td> NM_004960 </td> <td> FUS RNA binding protein </td> <td> FUS </td> <td> 2521 </td> <td> NM_001010850 /// NM_001170634 /// NM_001170937 /// NM_004960 /// NR_028388 /// XM_005255233 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -30.83 </td> <td> 363.74 </td> <td> -1.25 </td> <td> 0.25 </td> <td> 0.33 </td> <td> -4.58 </td> </tr>
  <tr> <td> 200660_at </td> <td> 200660_at </td> <td> NM_005620 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005620.1 /DEF=Homo sapiens S100 calcium-binding protein A11 (calgizzarin) (S100A11), mRNA.  /FEA=mRNA /GEN=S100A11 /PROD=S100 calcium-binding protein A11 /DB_XREF=gi:5032056 /UG=Hs.256290 S100 calcium-binding protein A11 (calgizzarin) /FL=gb:D49355.1 gb:BC001410.1 gb:D50374.1 gb:NM_005620.1 gb:D38583.1 </td> <td> NM_005620 </td> <td> S100 calcium binding protein A11 </td> <td> S100A11 </td> <td> 6282 </td> <td> NM_005620 </td> <td> 0007165 // signal transduction // traceable author statement /// 0008156 // negative regulation of DNA replication // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044548 // S100 protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from direct assay </td> <td> 78.75 </td> <td> 631.17 </td> <td> 1.25 </td> <td> 0.25 </td> <td> 0.33 </td> <td> -4.58 </td> </tr>
  <tr> <td> 214359_s_at </td> <td> 214359_s_at </td> <td> AI218219 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI218219 /FEA=EST /DB_XREF=gi:3798034 /DB_XREF=est:qh17h11.x1 /CLONE=IMAGE:1844997 /UG=Hs.74335 heat shock 90kD protein 1, beta </td> <td> AI218219 </td> <td> heat shock protein 90kDa alpha (cytosolic), class B member 1 </td> <td> HSP90AB1 </td> <td> 3326 </td> <td> NM_001271969 /// NM_001271970 /// NM_001271971 /// NM_001271972 /// NM_007355 /// NR_073528 /// XM_005249075 </td> <td> 0001890 // placenta development // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0009651 // response to salt stress // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045793 // positive regulation of cell size // inferred from electronic annotation /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // inferred from mutant phenotype /// 0060338 // regulation of type I interferon-mediated signaling pathway // inferred from mutant phenotype /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008180 // COP9 signalosome // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016234 // inclusion body // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0002134 // UTP binding // inferred from electronic annotation /// 0002135 // CTP binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0017098 // sulfonylurea receptor binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0023026 // MHC class II protein complex binding // inferred from direct assay /// 0030235 // nitric-oxide synthase regulator activity // inferred from sequence or structural similarity /// 0030911 // TPR domain binding // inferred from sequence or structural similarity /// 0032564 // dATP binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -83.77 </td> <td> 1234.61 </td> <td> -1.25 </td> <td> 0.25 </td> <td> 0.33 </td> <td> -4.58 </td> </tr>
  <tr> <td> 201588_at </td> <td> 201588_at </td> <td> NM_004786 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004786.1 /DEF=Homo sapiens thioredoxin-like, 32kD (TXNL), mRNA. /FEA=mRNA /GEN=TXNL /PROD=thioredoxin-like, 32kD /DB_XREF=gi:4759273 /UG=Hs.18792 thioredoxin-like, 32kD /FL=gb:BC001156.1 gb:AF003938.1 gb:AF051896.1 gb:AF052659.1 gb:NM_004786.1 </td> <td> NM_004786 </td> <td> thioredoxin-like 1 </td> <td> TXNL1 </td> <td> 9352 </td> <td> NM_004786 /// NR_024546 /// XM_006722580 /// XM_006722581 /// XR_430086 </td> <td> 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015036 // disulfide oxidoreductase activity // inferred from direct assay </td> <td> -33.18 </td> <td> 698.71 </td> <td> -1.25 </td> <td> 0.25 </td> <td> 0.33 </td> <td> -4.58 </td> </tr>
  <tr> <td> 206095_s_at </td> <td> 206095_s_at </td> <td> NM_006625 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006625.2 /DEF=Homo sapiens TLS-associated serine-arginine protein 1 (TASR1), mRNA.  /FEA=mRNA /GEN=TASR1 /PROD=TLS-associated serine-arginine protein 1 /DB_XREF=gi:12056474 /UG=Hs.288038 TLS-associated serine-arginine protein 1 /FL=gb:NM_006625.2 </td> <td> NM_006625 </td> <td> serine/arginine-rich splicing factor 10 </td> <td> SRSF10 </td> <td> 10772 </td> <td> NM_001191005 /// NM_001191006 /// NM_001191007 /// NM_001191009 /// NM_006625 /// NM_054016 /// NR_034035 /// XM_006710298 /// XM_006710299 /// XM_006710300 /// XM_006710301 </td> <td> 0000244 // spliceosomal tri-snRNP complex assembly // non-traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006376 // mRNA splice site selection // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // non-traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from direct assay /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay </td> <td> 0005634 // nucleus // inferred by curator /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050733 // RS domain binding // non-traceable author statement /// 0051082 // unfolded protein binding // non-traceable author statement </td> <td> 27.77 </td> <td> 191.96 </td> <td> 1.25 </td> <td> 0.25 </td> <td> 0.33 </td> <td> -4.58 </td> </tr>
  <tr> <td> 202828_s_at </td> <td> 202828_s_at </td> <td> NM_004995 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004995.2 /DEF=Homo sapiens matrix metalloproteinase 14 (membrane-inserted) (MMP14), mRNA.  /FEA=mRNA /GEN=MMP14 /PROD=matrix metalloproteinase 14 preproprotein /DB_XREF=gi:13027797 /UG=Hs.2399 matrix metalloproteinase 14 (membrane-inserted) /FL=gb:U41078.1 gb:NM_004995.2 </td> <td> NM_004995 </td> <td> matrix metallopeptidase 14 (membrane-inserted) </td> <td> MMP14 </td> <td> 4323 </td> <td> NM_004995 </td> <td> 0001503 // ossification // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001935 // endothelial cell proliferation // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009725 // response to hormone // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030574 // collagen catabolic process // traceable author statement /// 0031638 // zymogen activation // inferred from electronic annotation /// 0043615 // astrocyte cell migration // inferred from electronic annotation /// 0043627 // response to estrogen // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0048771 // tissue remodeling // inferred from electronic annotation /// 0051895 // negative regulation of focal adhesion assembly // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 45.07 </td> <td> 154.16 </td> <td> 1.24 </td> <td> 0.25 </td> <td> 0.33 </td> <td> -4.58 </td> </tr>
  <tr> <td> 210764_s_at </td> <td> 210764_s_at </td> <td> AF003114 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF003114.1 /DEF=Homo sapiens CYR61 mRNA, complete cds. /FEA=mRNA /GEN=CYR61 /DB_XREF=gi:6649848 /UG=Hs.8867 cysteine-rich, angiogenic inducer, 61 /FL=gb:AF003114.1 </td> <td> AF003114 </td> <td> cysteine-rich, angiogenic inducer, 61 </td> <td> CYR61 </td> <td> 3491 </td> <td> NM_001554 </td> <td> 0001558 // regulation of cell growth // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0002041 // intussusceptive angiogenesis // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003278 // apoptotic process involved in heart morphogenesis // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0010518 // positive regulation of phospholipase activity // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030513 // positive regulation of BMP signaling pathway // inferred from genetic interaction /// 0033690 // positive regulation of osteoblast proliferation // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0044319 // wound healing, spreading of cells // inferred from direct assay /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060413 // atrial septum morphogenesis // inferred from electronic annotation /// 0060591 // chondroblast differentiation // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0061036 // positive regulation of cartilage development // inferred from electronic annotation /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2000304 // positive regulation of ceramide biosynthetic process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation </td> <td> 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation </td> <td> 169.90 </td> <td> 1472.80 </td> <td> 1.24 </td> <td> 0.25 </td> <td> 0.33 </td> <td> -4.58 </td> </tr>
  <tr> <td> 212347_x_at </td> <td> 212347_x_at </td> <td> AA831438 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA831438 /FEA=EST /DB_XREF=gi:2904537 /DB_XREF=est:oc74e08.s1 /CLONE=IMAGE:1355462 /UG=Hs.102402 Mad4 homolog </td> <td> AA831438 </td> <td> microRNA 4800 /// MAX dimerization protein 4 </td> <td> MIR4800 /// MXD4 </td> <td> 10608 /// 100616358 </td> <td> NM_006454 /// NR_039964 /// XR_427467 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -24.78 </td> <td> 153.21 </td> <td> -1.24 </td> <td> 0.25 </td> <td> 0.33 </td> <td> -4.58 </td> </tr>
  <tr> <td> 218448_at </td> <td> 218448_at </td> <td> NM_017896 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017896.1 /DEF=Homo sapiens hypothetical protein FLJ20602 (FLJ20602), mRNA. /FEA=mRNA /GEN=FLJ20602 /PROD=hypothetical protein FLJ20602 /DB_XREF=gi:8923556 /UG=Hs.103808 hypothetical protein FLJ20602 /FL=gb:NM_017896.1 </td> <td> NM_017896 </td> <td> GID complex subunit 8 </td> <td> GID8 </td> <td> 54994 </td> <td> NM_017896 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -18.22 </td> <td> 245.36 </td> <td> -1.24 </td> <td> 0.25 </td> <td> 0.33 </td> <td> -4.58 </td> </tr>
  <tr> <td> 214315_x_at </td> <td> 214315_x_at </td> <td> AI348935 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI348935 /FEA=EST /DB_XREF=gi:4086141 /DB_XREF=est:tb60a01.x1 /CLONE=IMAGE:2058696 /UG=Hs.16488 calreticulin </td> <td> AI348935 </td> <td> calreticulin </td> <td> CALR </td> <td> 811 </td> <td> NM_004343 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002502 // peptide antigen assembly with MHC class I protein complex // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006611 // protein export from nucleus // inferred from direct assay /// 0006874 // cellular calcium ion homeostasis // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007050 // cell cycle arrest // inferred from genetic interaction /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0017148 // negative regulation of translation // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0022417 // protein maturation by protein folding // traceable author statement /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032355 // response to estradiol // inferred from electronic annotation /// 0033144 // negative regulation of intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0033574 // response to testosterone // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0040020 // regulation of meiosis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042921 // glucocorticoid receptor signaling pathway // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045665 // negative regulation of neuron differentiation // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from genetic interaction /// 0045787 // positive regulation of cell cycle // inferred from genetic interaction /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from direct assay /// 0050766 // positive regulation of phagocytosis // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050821 // protein stabilization // traceable author statement /// 0051208 // sequestering of calcium ion // traceable author statement /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // inferred from electronic annotation /// 0071285 // cellular response to lithium ion // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0090398 // cellular senescence // inferred from genetic interaction /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from mutant phenotype /// 2000510 // positive regulation of dendritic cell chemotaxis // inferred from mutant phenotype </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005844 // polysome // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0033018 // sarcoplasmic reticulum lumen // inferred from electronic annotation /// 0042824 // MHC class I peptide loading complex // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0001849 // complement component C1q binding // traceable author statement /// 0001948 // glycoprotein binding // inferred from physical interaction /// 0003677 // DNA binding // non-traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0030246 // carbohydrate binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042277 // peptide binding // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation /// 0044183 // protein binding involved in protein folding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from direct assay /// 0051082 // unfolded protein binding // traceable author statement /// 0051087 // chaperone binding // traceable author statement </td> <td> 199.68 </td> <td> 741.29 </td> <td> 1.23 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.58 </td> </tr>
  <tr> <td> 219058_x_at </td> <td> 219058_x_at </td> <td> NM_022164 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022164.1 /DEF=Homo sapiens P3ECSL (LIECG3), mRNA. /FEA=mRNA /GEN=LIECG3 /PROD=P3ECSL /DB_XREF=gi:11545917 /UG=Hs.173508 P3ECSL /FL=gb:AF205436.1 gb:AB050716.1 gb:NM_022164.1 gb:AF236150.1 </td> <td> NM_022164 </td> <td> tubulointerstitial nephritis antigen-like 1 </td> <td> TINAGL1 </td> <td> 64129 </td> <td> NM_001204414 /// NM_001204415 /// NM_022164 /// XM_005271106 /// XM_005271107 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0016197 // endosomal transport // traceable author statement </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from electronic annotation </td> <td> -33.18 </td> <td> 220.41 </td> <td> -1.23 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.58 </td> </tr>
  <tr> <td> 204145_at </td> <td> 204145_at </td> <td> NM_004477 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004477.1 /DEF=Homo sapiens FSHD region gene 1 (FRG1), mRNA. /FEA=mRNA /GEN=FRG1 /PROD=FSHD region gene 1 /DB_XREF=gi:4758403 /UG=Hs.203772 FSHD region gene 1 /FL=gb:L76159.1 gb:NM_004477.1 </td> <td> NM_004477 </td> <td> FSHD region gene 1 /// protein FRG1-like /// uncharacterized LOC101930278 /// protein FRG1-like </td> <td> FRG1 /// LOC100289097 /// LOC101930278 /// LOC101930531 </td> <td> 2483 /// 100289097 /// 101930278 /// 101930531 </td> <td> NM_004477 /// XM_005262879 /// XM_005262880 /// XM_006714166 /// XM_006725445 /// XM_006725446 /// XM_006725447 /// XR_250590 /// XR_250603 /// XR_426484 /// XR_430284 /// XR_430390 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from electronic annotation </td> <td> -20.12 </td> <td> 80.41 </td> <td> -1.23 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.58 </td> </tr>
  <tr> <td> 212285_s_at </td> <td> 212285_s_at </td> <td> AW008051 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW008051 /FEA=EST /DB_XREF=gi:5856829 /DB_XREF=est:wv48h10.x1 /CLONE=IMAGE:2532835 /UG=Hs.273330 Homo sapiens, clone IMAGE:3506210, mRNA, partial cds </td> <td> AW008051 </td> <td> agrin </td> <td> AGRN </td> <td> 375790 </td> <td> NM_198576 /// XM_005244749 /// XM_006710633 /// XM_006710634 /// XM_006710635 /// XM_006710636 /// XM_006710637 </td> <td> 0001523 // retinoid metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006027 // glycosaminoglycan catabolic process // traceable author statement /// 0007009 // plasma membrane organization // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007268 // synaptic transmission // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007528 // neuromuscular junction development // inferred from electronic annotation /// 0007603 // phototransduction, visible light // traceable author statement /// 0008582 // regulation of synaptic growth at neuromuscular junction // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0043113 // receptor clustering // inferred from direct assay /// 0043113 // receptor clustering // inferred from mutant phenotype /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045162 // clustering of voltage-gated sodium channels // traceable author statement /// 0045213 // neurotransmitter receptor metabolic process // inferred from electronic annotation /// 0045887 // positive regulation of synaptic growth at neuromuscular junction // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0050808 // synapse organization // traceable author statement /// 0051491 // positive regulation of filopodium assembly // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005605 // basal lamina // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // traceable author statement /// 0043202 // lysosomal lumen // traceable author statement /// 0045202 // synapse // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002162 // dystroglycan binding // inferred from sequence or structural similarity /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0030548 // acetylcholine receptor regulator activity // inferred from electronic annotation /// 0033691 // sialic acid binding // inferred from sequence or structural similarity /// 0035374 // chondroitin sulfate binding // inferred from sequence or structural similarity /// 0043236 // laminin binding // traceable author statement /// 0043395 // heparan sulfate proteoglycan binding // inferred from sequence or structural similarity </td> <td> -28.03 </td> <td> 247.24 </td> <td> -1.23 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.58 </td> </tr>
  <tr> <td> 217998_at </td> <td> 217998_at </td> <td> NM_007350 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_007350.1 /DEF=Homo sapiens pleckstrin homology-like domain, family A, member 1 (PHLDA1), mRNA.  /FEA=mRNA /GEN=PHLDA1 /PROD=pleckstrin homology-like domain, family A,member 1 /DB_XREF=gi:6679302 /UG=Hs.82101 pleckstrin homology-like domain, family A, member 1 /FL=gb:NM_007350.1 </td> <td> NM_007350 </td> <td> pleckstrin homology-like domain, family A, member 1 </td> <td> PHLDA1 </td> <td> 22822 </td> <td> NM_007350 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0021879 // forebrain neuron differentiation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045210 // FasL biosynthetic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> 27.77 </td> <td> 104.74 </td> <td> 1.23 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 212363_x_at </td> <td> 212363_x_at </td> <td> AU145192 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU145192 /FEA=EST /DB_XREF=gi:11006713 /DB_XREF=est:AU145192 /CLONE=HEMBA1004153 /UG=Hs.14376 actin, gamma 1 </td> <td> AU145192 </td> <td> actin, beta /// actin, gamma 1 </td> <td> ACTB /// ACTG1 </td> <td> 60 /// 71 </td> <td> NM_001101 /// NM_001199954 /// NM_001614 /// NR_037688 /// XM_006715764 /// XM_006722048 /// XM_006722049 </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0006325 // chromatin organization // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred by curator /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction </td> <td> -858.00 </td> <td> 5776.73 </td> <td> -1.23 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201739_at </td> <td> 201739_at </td> <td> NM_005627 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005627.1 /DEF=Homo sapiens serumglucocorticoid regulated kinase (SGK), mRNA. /FEA=mRNA /GEN=SGK /PROD=serumglucocorticoid regulated kinase /DB_XREF=gi:5032090 /UG=Hs.296323 serumglucocorticoid regulated kinase /FL=gb:BC001263.1 gb:NM_005627.1 gb:AF153609.1 </td> <td> NM_005627 </td> <td> serum/glucocorticoid regulated kinase 1 </td> <td> SGK1 </td> <td> 6446 </td> <td> NM_001143676 /// NM_001143677 /// NM_001143678 /// NM_001291995 /// NM_005627 </td> <td> 0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006814 // sodium ion transport // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007616 // long-term memory // traceable author statement /// 0008217 // regulation of blood pressure // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030334 // regulation of cell migration // traceable author statement /// 0032411 // positive regulation of transporter activity // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0050790 // regulation of catalytic activity // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060453 // regulation of gastric acid secretion // traceable author statement /// 0070294 // renal sodium ion absorption // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005246 // calcium channel regulator activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // traceable author statement /// 0017081 // chloride channel regulator activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation </td> <td> -189.92 </td> <td> 959.61 </td> <td> -1.23 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201360_at </td> <td> 201360_at </td> <td> NM_000099 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000099.1 /DEF=Homo sapiens cystatin C (amyloid angiopathy and cerebral hemorrhage) (CST3), mRNA.  /FEA=mRNA /GEN=CST3 /PROD=cystatin C (amyloid angiopathy and cerebralhemorrhage) /DB_XREF=gi:4503106 /UG=Hs.135084 cystatin C (amyloid angiopathy and cerebral hemorrhage) /FL=gb:NM_000099.1 </td> <td> NM_000099 </td> <td> cystatin C </td> <td> CST3 </td> <td> 1471 </td> <td> NM_000099 /// NM_001288614 </td> <td> 0006952 // defense response // inferred from direct assay /// 0010466 // negative regulation of peptidase activity // inferred from direct assay /// 0010703 // negative regulation of histolysis // inferred by curator /// 0010711 // negative regulation of collagen catabolic process // inferred from expression pattern /// 0010716 // negative regulation of extracellular matrix disassembly // inferred by curator /// 0010716 // negative regulation of extracellular matrix disassembly // inferred from expression pattern /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0034103 // regulation of tissue remodeling // inferred from expression pattern /// 0043206 // extracellular fibril organization // inferred from genetic interaction /// 0045861 // negative regulation of proteolysis // inferred from direct assay /// 0060311 // negative regulation of elastin catabolic process // inferred from mutant phenotype /// 0060313 // negative regulation of blood vessel remodeling // inferred from expression pattern </td> <td> 0005576 // extracellular region // inferred from mutant phenotype /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001540 // beta-amyloid binding // inferred from physical interaction /// 0002020 // protease binding // inferred from physical interaction /// 0004866 // endopeptidase inhibitor activity // inferred from direct assay /// 0004869 // cysteine-type endopeptidase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> 28.75 </td> <td> 330.52 </td> <td> 1.22 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200989_at </td> <td> 200989_at </td> <td> NM_001530 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001530.1 /DEF=Homo sapiens hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) (HIF1A), mRNA.  /FEA=mRNA /GEN=HIF1A /PROD=hypoxia-inducible factor 1, alpha subunit (basichelix-loop-helix transcription factor) /DB_XREF=gi:4504384 /UG=Hs.197540 hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) /FL=gb:U29165.1 gb:AF304431.1 gb:NM_001530.1 gb:AF207601.1 gb:AF207602.1 gb:U22431.1 </td> <td> NM_001530 </td> <td> hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) </td> <td> HIF1A </td> <td> 3091 </td> <td> NM_001243084 /// NM_001530 /// NM_181054 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from direct assay /// 0001666 // response to hypoxia // inferred from mutant phenotype /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001922 // B-1 B cell homeostasis // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred by curator /// 0001944 // vasculature development // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0002248 // connective tissue replacement involved in inflammatory response wound healing // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003208 // cardiac ventricle morphogenesis // inferred from electronic annotation /// 0006089 // lactate metabolic process // inferred from electronic annotation /// 0006110 // regulation of glycolytic process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007595 // lactation // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from direct assay /// 0010573 // vascular endothelial growth factor production // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from mutant phenotype /// 0010634 // positive regulation of epithelial cell migration // inferred from sequence or structural similarity /// 0010870 // positive regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0014850 // response to muscle activity // inferred from electronic annotation /// 0019896 // axon transport of mitochondrion // inferred from mutant phenotype /// 0021502 // neural fold elevation formation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030502 // negative regulation of bone mineralization // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred by curator /// 0032007 // negative regulation of TOR signaling // inferred from electronic annotation /// 0032364 // oxygen homeostasis // inferred from direct assay /// 0032722 // positive regulation of chemokine production // traceable author statement /// 0032909 // regulation of transforming growth factor beta2 production // inferred from mutant phenotype /// 0032963 // collagen metabolic process // inferred from sequence or structural similarity /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042541 // hemoglobin biosynthetic process // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred by curator /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043619 // regulation of transcription from RNA polymerase II promoter in response to oxidative stress // inferred from direct assay /// 0045648 // positive regulation of erythrocyte differentiation // inferred by curator /// 0045766 // positive regulation of angiogenesis // inferred by curator /// 0045821 // positive regulation of glycolytic process // inferred by curator /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045926 // negative regulation of growth // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0046716 // muscle cell cellular homeostasis // inferred from electronic annotation /// 0046886 // positive regulation of hormone biosynthetic process // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051000 // positive regulation of nitric-oxide synthase activity // traceable author statement /// 0051216 // cartilage development // inferred from electronic annotation /// 0051541 // elastin metabolic process // inferred from sequence or structural similarity /// 0060574 // intestinal epithelial cell maturation // inferred from electronic annotation /// 0061030 // epithelial cell differentiation involved in mammary gland alveolus development // inferred from electronic annotation /// 0061298 // retina vasculature development in camera-type eye // inferred from electronic annotation /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0061419 // positive regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from direct assay /// 0061419 // positive regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from mutant phenotype /// 0070101 // positive regulation of chemokine-mediated signaling pathway // inferred by curator /// 0070243 // regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0070244 // negative regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071456 // cellular response to hypoxia // traceable author statement /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 2001054 // negative regulation of mesenchymal cell apoptotic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from physical interaction /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0031514 // motile cilium // inferred from electronic annotation </td> <td> 0000988 // protein binding transcription factor activity // inferred from direct assay /// 0000989 // transcription factor binding transcription factor activity // inferred from direct assay /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0035257 // nuclear hormone receptor binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // traceable author statement /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from direct assay </td> <td> -41.20 </td> <td> 874.62 </td> <td> -1.22 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 210993_s_at </td> <td> 210993_s_at </td> <td> U54826 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U54826.1 /DEF=Human mad-related protein MADR1 mRNA, complete cds. /FEA=mRNA /PROD=mad-related protein MADR1 /DB_XREF=gi:1332713 /UG=Hs.79067 MAD (mothers against decapentaplegic, Drosophila) homolog 1 /FL=gb:U54826.1 gb:U59912.1 </td> <td> U54826 </td> <td> SMAD family member 1 </td> <td> SMAD1 </td> <td> 4086 </td> <td> NM_001003688 /// NM_005900 /// XM_005262991 /// XM_005262992 /// XM_005262993 /// XM_006714217 </td> <td> 0000165 // MAPK cascade // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001710 // mesodermal cell fate commitment // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0002051 // osteoblast fate commitment // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // non-traceable author statement /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0007276 // gamete generation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from sequence or structural similarity /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010656 // negative regulation of muscle cell apoptotic process // inferred from electronic annotation /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from sequence or structural similarity /// 0030509 // BMP signaling pathway // traceable author statement /// 0030901 // midbrain development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from electronic annotation /// 0031053 // primary miRNA processing // traceable author statement /// 0042060 // wound healing // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042592 // homeostatic process // inferred from electronic annotation /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0060038 // cardiac muscle cell proliferation // inferred from electronic annotation /// 0060348 // bone development // inferred from electronic annotation /// 0061036 // positive regulation of cartilage development // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071773 // cellular response to BMP stimulus // inferred from sequence or structural similarity /// 1901522 // positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005637 // nuclear inner membrane // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016021 // integral component of membrane // non-traceable author statement /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005057 // receptor signaling protein activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030618 // transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity // traceable author statement /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070410 // co-SMAD binding // inferred from physical interaction /// 0070411 // I-SMAD binding // inferred from physical interaction </td> <td> 35.92 </td> <td> 545.01 </td> <td> 1.22 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 208781_x_at </td> <td> 208781_x_at </td> <td> AF062483 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF062483.1 /DEF=Homo sapiens SDP3 mRNA, complete cds. /FEA=mRNA /PROD=SDP3 /DB_XREF=gi:3126978 /UG=Hs.12102 sorting nexin 3 /FL=gb:AF062483.1 gb:AF034546.1 gb:NM_003795.1 </td> <td> AF062483 </td> <td> sorting nexin 3 </td> <td> SNX3 </td> <td> 8724 </td> <td> NM_003795 /// NM_152827 /// NM_152828 /// XM_005267192 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // not recorded /// 0006897 // endocytosis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0042541 // hemoglobin biosynthetic process // not recorded </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation </td> <td> 52.85 </td> <td> 561.98 </td> <td> 1.22 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 221984_s_at </td> <td> 221984_s_at </td> <td> AL040896 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL040896 /FEA=EST /DB_XREF=gi:5409841 /DB_XREF=est:DKFZp434I2415_s1 /CLONE=DKFZp434I2415 /UG=Hs.22412 hypothetical protein MGC3035 </td> <td> AL040896 </td> <td> family with sequence similarity 134, member A </td> <td> FAM134A </td> <td> 79137 </td> <td> NM_024293 /// XM_005246848 /// XM_005246849 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -18.48 </td> <td> 123.99 </td> <td> -1.22 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 213133_s_at </td> <td> 213133_s_at </td> <td> AW237404 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW237404 /FEA=EST /DB_XREF=gi:6569793 /DB_XREF=est:xm71d06.x1 /CLONE=IMAGE:2689643 /UG=Hs.77631 glycine cleavage system protein H (aminomethyl carrier) </td> <td> AW237404 </td> <td> glycine cleavage system protein H (aminomethyl carrier) /// glycine cleavage system H protein, mitochondrial-like </td> <td> GCSH /// LOC101060817 </td> <td> 2653 /// 101060817 </td> <td> NM_004483 /// NR_033249 /// XM_003960892 </td> <td> 0006546 // glycine catabolic process // traceable author statement /// 0019464 // glycine decarboxylation via glycine cleavage system // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0032259 // methylation // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005960 // glycine cleavage complex // inferred from electronic annotation </td> <td> 0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation </td> <td> 40.10 </td> <td> 188.10 </td> <td> 1.22 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211924_s_at </td> <td> 211924_s_at </td> <td> AY029180 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AY029180.1 /DEF=Homo sapiens soluble urokinase plasminogen activator receptor precursor (SUPAR) mRNA, complete cds.  /FEA=CDS /GEN=SUPAR /PROD=soluble urokinase plasminogen activator receptorprecursor /DB_XREF=gi:13641308 /FL=gb:AY029180.1 </td> <td> AY029180 </td> <td> plasminogen activator, urokinase receptor </td> <td> PLAUR </td> <td> 5329 </td> <td> NM_001005376 /// NM_001005377 /// NM_002659 /// XM_005258988 /// XM_005258989 /// XM_005258990 /// XM_006723241 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006501 // C-terminal protein lipidation // traceable author statement /// 0006928 // cellular component movement // non-traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016255 // attachment of GPI anchor to protein // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030162 // regulation of proteolysis // non-traceable author statement /// 0038195 // urokinase plasminogen activator signaling pathway // non-traceable author statement /// 0042730 // fibrinolysis // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0019898 // extrinsic component of membrane // traceable author statement /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0004872 // receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0030377 // urokinase plasminogen activator receptor activity // non-traceable author statement </td> <td> 21.93 </td> <td> 111.76 </td> <td> 1.22 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201576_s_at </td> <td> 201576_s_at </td> <td> NM_000404 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000404.1 /DEF=Homo sapiens galactosidase, beta 1 (GLB1), mRNA. /FEA=mRNA /GEN=GLB1 /PROD=galactosidase, beta 1 /DB_XREF=gi:10834965 /UG=Hs.79222 galactosidase, beta 1 /FL=gb:NM_000404.1 gb:M27507.1 gb:M22590.1 gb:M34423.1 </td> <td> NM_000404 </td> <td> galactosidase, beta 1 /// transmembrane protein with metallophosphoesterase domain </td> <td> GLB1 /// TMPPE </td> <td> 2720 /// 643853 </td> <td> NM_000404 /// NM_001039770 /// NM_001079811 /// NM_001135602 /// NM_001136238 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006027 // glycosaminoglycan catabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0019388 // galactose catabolic process // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0042339 // keratan sulfate metabolic process // traceable author statement /// 0042340 // keratan sulfate catabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0009341 // beta-galactosidase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004565 // beta-galactosidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0016936 // galactoside binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -27.00 </td> <td> 311.70 </td> <td> -1.22 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201059_at </td> <td> 201059_at </td> <td> NM_005231 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005231.1 /DEF=Homo sapiens ems1 sequence (mammary tumor and squamous cell carcinoma-associated (p8085 src substrate) (EMS1), mRNA.  /FEA=mRNA /GEN=EMS1 /PROD=cortactin /DB_XREF=gi:4885204 /UG=Hs.119257 ems1 sequence (mammary tumor and squamous cell carcinoma-associated (p8085 src substrate) /FL=gb:M98343.1 gb:NM_005231.1 </td> <td> NM_005231 </td> <td> cortactin </td> <td> CTTN </td> <td> 2017 </td> <td> NM_001184740 /// NM_005231 /// NM_138565 /// XM_006718447 /// XM_006718448 </td> <td>  </td> <td> 0001726 // ruffle // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 94.35 </td> <td> 238.43 </td> <td> 1.22 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 209130_at </td> <td> 209130_at </td> <td> BC003686 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003686.1 /DEF=Homo sapiens, synaptosomal-associated protein, 23kD, clone MGC:5155, mRNA, complete cds.  /FEA=mRNA /PROD=synaptosomal-associated protein, 23kD /DB_XREF=gi:13277555 /UG=Hs.184376 synaptosomal-associated protein, 23kD /FL=gb:BC000148.2 gb:BC003686.1 gb:U55936.1 gb:Y09567.1 </td> <td> BC003686 </td> <td> synaptosomal-associated protein, 23kDa </td> <td> SNAP23 </td> <td> 8773 </td> <td> NM_003825 /// NM_130798 /// XM_006720725 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006903 // vesicle targeting // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0061025 // membrane fusion // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042581 // specific granule // inferred from direct assay /// 0042582 // azurophil granule // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 61.40 </td> <td> 624.92 </td> <td> 1.22 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201626_at </td> <td> 201626_at </td> <td> BG292233 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG292233 /FEA=EST /DB_XREF=gi:13050848 /DB_XREF=est:602386668F1 /CLONE=IMAGE:4515521 /UG=Hs.56205 insulin induced gene 1 /FL=gb:NM_005542.1 </td> <td> BG292233 </td> <td> insulin induced gene 1 </td> <td> INSIG1 </td> <td> 3638 </td> <td> NM_005542 /// NM_198336 /// NM_198337 /// XM_005249542 /// XM_005249543 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006991 // response to sterol depletion // inferred from electronic annotation /// 0008152 // metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010894 // negative regulation of steroid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0032933 // SREBP signaling pathway // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045717 // negative regulation of fatty acid biosynthetic process // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060363 // cranial suture morphogenesis // inferred from electronic annotation /// 1901303 // negative regulation of cargo loading into COPII-coated vesicle // inferred from mutant phenotype </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032937 // SREBP-SCAP-Insig complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 25.83 </td> <td> 137.21 </td> <td> 1.22 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 209868_s_at </td> <td> 209868_s_at </td> <td> D28482 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D28482.1 /DEF=Human scr2 mRNA for RNA binding protein SCR2, complete cds. /FEA=mRNA /GEN=scr2 /PROD=SCR2 /DB_XREF=gi:520588 /UG=Hs.241567 RNA binding motif, single stranded interacting protein 1 /FL=gb:D28482.1 gb:NM_016836.1 gb:NM_016838.1 gb:NM_002897.2 </td> <td> D28482 </td> <td> RNA binding motif, single stranded interacting protein 1 </td> <td> RBMS1 </td> <td> 5937 </td> <td> NM_002897 /// NM_016836 /// NM_016839 /// XM_005246737 /// XM_005246738 /// XM_005246739 /// XM_005246740 /// XM_005246741 /// XM_006712671 /// XM_006712672 /// XM_006712673 /// XM_006712674 /// XM_006712675 </td> <td> 0006260 // DNA replication // non-traceable author statement /// 0006396 // RNA processing // traceable author statement </td> <td> 0005634 // nucleus // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // non-traceable author statement /// 0003697 // single-stranded DNA binding // non-traceable author statement /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 34.22 </td> <td> 395.71 </td> <td> 1.22 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 216107_at </td> <td> 216107_at </td> <td> AF218021 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF218021.1 /DEF=Homo sapiens clone PP552 unknown mRNA. /FEA=mRNA /PROD=unknown /DB_XREF=gi:10441971 /UG=Hs.302127 Homo sapiens clone PP552 unknown mRNA </td> <td> AF218021 </td> <td> uncharacterized LOC100129503 </td> <td> PP13 </td> <td> 100129503 </td> <td> XR_243769 </td> <td>  </td> <td>  </td> <td>  </td> <td> -14.52 </td> <td> 42.41 </td> <td> -1.21 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 218849_s_at </td> <td> 218849_s_at </td> <td> NM_006663 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006663.1 /DEF=Homo sapiens RelA-associated inhibitor (RAI), mRNA. /FEA=mRNA /GEN=RAI /PROD=RelA-associated inhibitor /DB_XREF=gi:5730000 /UG=Hs.324051 RelA-associated inhibitor /FL=gb:AF078037.1 gb:NM_006663.1 </td> <td> NM_006663 </td> <td> protein phosphatase 1, regulatory subunit 13 like </td> <td> PPP1R13L </td> <td> 10848 </td> <td> NM_001142502 /// NM_006663 /// XM_005258424 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0003215 // cardiac right ventricle morphogenesis // inferred from electronic annotation /// 0003229 // ventricular cardiac muscle tissue development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0031076 // embryonic camera-type eye development // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042633 // hair cycle // inferred from electronic annotation /// 0048871 // multicellular organismal homeostasis // inferred from electronic annotation /// 0060048 // cardiac muscle contraction // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay </td> <td> 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -22.52 </td> <td> 217.16 </td> <td> -1.21 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211995_x_at </td> <td> 211995_x_at </td> <td> AL567820 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL567820 /FEA=EST /DB_XREF=gi:12921560 /DB_XREF=est:AL567820 /CLONE=CS0DF033YD24 (3 prime) /UG=Hs.14376 actin, gamma 1 </td> <td> AL567820 </td> <td> actin, beta /// actin, gamma 1 </td> <td> ACTB /// ACTG1 </td> <td> 60 /// 71 </td> <td> NM_001101 /// NM_001199954 /// NM_001614 /// NR_037688 /// XM_006715764 /// XM_006722048 /// XM_006722049 </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0006325 // chromatin organization // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred by curator /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction </td> <td> -711.13 </td> <td> 5533.66 </td> <td> -1.21 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 210759_s_at </td> <td> 210759_s_at </td> <td> M64992 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M64992.1 /DEF=Human prosomal protein P30-33K (pros-30) mRNA, complete cds. /FEA=mRNA /GEN=pros-30 /PROD=prosomal protein P30-33K /DB_XREF=gi:190446 /UG=Hs.82159 proteasome (prosome, macropain) subunit, alpha type, 1 /FL=gb:M64992.1 </td> <td> M64992 </td> <td> proteasome (prosome, macropain) subunit, alpha type, 1 </td> <td> PSMA1 </td> <td> 5682 </td> <td> NM_001143937 /// NM_002786 /// NM_148976 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002862 // negative regulation of inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0005844 // polysome // traceable author statement /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001530 // lipopolysaccharide binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -71.60 </td> <td> 960.60 </td> <td> -1.21 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 218708_at </td> <td> 218708_at </td> <td> NM_013248 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013248.1 /DEF=Homo sapiens NTF2-related export protein 1 (NXT1), mRNA. /FEA=mRNA /GEN=NXT1 /PROD=NTF2-related export protein 1 /DB_XREF=gi:7019470 /UG=Hs.24563 NTF2-related export protein 1 /FL=gb:BC000759.1 gb:BC002687.1 gb:BC003029.1 gb:BC003410.1 gb:AF156957.1 gb:NM_013248.1 </td> <td> NM_013248 </td> <td> nuclear transport factor 2-like export factor 1 </td> <td> NXT1 </td> <td> 29107 </td> <td> NM_013248 </td> <td> 0006405 // RNA export from nucleus // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // inferred from electronic annotation </td> <td> -17.55 </td> <td> 155.82 </td> <td> -1.21 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202458_at </td> <td> 202458_at </td> <td> NM_007173 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007173.1 /DEF=Homo sapiens protease, serine, 23 (SPUVE), mRNA. /FEA=mRNA /GEN=SPUVE /PROD=protease, serine, 23 /DB_XREF=gi:6005881 /UG=Hs.325820 protease, serine, 23 /FL=gb:AL136914.1 gb:BC001278.1 gb:AF015287.1 gb:NM_007173.1 gb:AF193611.1 </td> <td> NM_007173 </td> <td> protease, serine, 23 </td> <td> PRSS23 </td> <td> 11098 </td> <td> NM_001293178 /// NM_001293179 /// NM_001293180 /// NM_007173 /// NR_120591 /// NR_120592 /// NR_120593 /// XM_005273727 /// XR_424260 /// XR_428964 /// XR_432738 </td> <td> 0006508 // proteolysis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -80.65 </td> <td> 1290.58 </td> <td> -1.21 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 207525_s_at </td> <td> 207525_s_at </td> <td> NM_005716 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005716.1 /DEF=Homo sapiens chromosome 19 open reading frame 3 (C19ORF3), mRNA. /FEA=mRNA /GEN=C19ORF3 /PROD=GLUT1 C-terminal binding protein /DB_XREF=gi:5031714 /UG=Hs.6454 chromosome 19 open reading frame 3 /FL=gb:AF089816.1 gb:NM_005716.1 </td> <td> NM_005716 </td> <td> GIPC PDZ domain containing family, member 1 </td> <td> GIPC1 </td> <td> 10755 </td> <td> NM_005716 /// NM_202467 /// NM_202468 /// NM_202469 /// NM_202470 /// NM_202494 </td> <td> 0006605 // protein targeting // inferred from sequence or structural similarity /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007268 // synaptic transmission // inferred from sequence or structural similarity /// 0014047 // glutamate secretion // inferred from sequence or structural similarity /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0031647 // regulation of protein stability // inferred from sequence or structural similarity /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0032467 // positive regulation of cytokinesis // inferred from mutant phenotype /// 0043542 // endothelial cell migration // inferred from sequence or structural similarity /// 0048167 // regulation of synaptic plasticity // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005903 // brush border // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0012506 // vesicle membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0043198 // dendritic shaft // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0017022 // myosin binding // inferred from sequence or structural similarity /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity </td> <td> 19.92 </td> <td> 175.31 </td> <td> 1.21 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202069_s_at </td> <td> 202069_s_at </td> <td> AI826060 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI826060 /FEA=EST /DB_XREF=gi:5446731 /DB_XREF=est:wk28a12.x1 /CLONE=IMAGE:2413630 /UG=Hs.250616 isocitrate dehydrogenase 3 (NAD+) alpha /FL=gb:NM_005530.1 gb:U07681.1 </td> <td> AI826060 </td> <td> isocitrate dehydrogenase 3 (NAD+) alpha </td> <td> IDH3A </td> <td> 3419 </td> <td> NM_005530 /// XM_005254334 /// XM_005254336 /// XM_005254337 </td> <td> 0000038 // very long-chain fatty acid metabolic process // inferred from direct assay /// 0001552 // ovarian follicle atresia // inferred from electronic annotation /// 0001676 // long-chain fatty acid metabolic process // inferred from direct assay /// 0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0042552 // myelination // non-traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004449 // isocitrate dehydrogenase (NAD+) activity // inferred from electronic annotation /// 0004467 // long-chain fatty acid-CoA ligase activity // inferred from direct assay /// 0004467 // long-chain fatty acid-CoA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031957 // very long-chain fatty acid-CoA ligase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 15.35 </td> <td> 94.17 </td> <td> 1.21 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 217679_x_at </td> <td> 217679_x_at </td> <td> AI683552 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI683552 /FEA=EST /DB_XREF=gi:4893734 /DB_XREF=est:tx67h02.x1 /CLONE=IMAGE:2274675 /UG=Hs.201605 ESTs, Moderately similar to ALU8_HUMAN ALU SUBFAMILY SX SEQUENCE CONTAMINATION WARNING ENTRY H.sapiens </td> <td> AI683552 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 17.92 </td> <td> 54.74 </td> <td> 1.21 </td> <td> 0.26 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 212221_x_at </td> <td> 212221_x_at </td> <td> AV703259 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV703259 /FEA=EST /DB_XREF=gi:10720588 /DB_XREF=est:AV703259 /CLONE=ADBCRE12 /UG=Hs.303154 popeye protein 3 </td> <td> AV703259 </td> <td> iduronate 2-sulfatase </td> <td> IDS </td> <td> 3423 </td> <td> NM_000202 /// NM_001166550 /// NM_006123 /// NR_104128 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006027 // glycosaminoglycan catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030207 // chondroitin sulfate catabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005764 // lysosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004423 // iduronate-2-sulfatase activity // traceable author statement /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 24.50 </td> <td> 130.28 </td> <td> 1.21 </td> <td> 0.27 </td> <td> 0.34 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200947_s_at </td> <td> 200947_s_at </td> <td> NM_005271 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005271.1 /DEF=Homo sapiens glutamate dehydrogenase 1 (GLUD1), mRNA. /FEA=mRNA /GEN=GLUD1 /PROD=glutamate dehydrogenase 1 /DB_XREF=gi:4885280 /UG=Hs.77508 glutamate dehydrogenase 1 /FL=gb:J03248.1 gb:M37154.1 gb:M20867.1 gb:NM_005271.1 </td> <td> NM_005271 </td> <td> glutamate dehydrogenase 1 </td> <td> GLUD1 </td> <td> 2746 </td> <td> NM_005271 </td> <td> 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006537 // glutamate biosynthetic process // inferred from direct assay /// 0006538 // glutamate catabolic process // inferred from direct assay /// 0006541 // glutamine metabolic process // inferred from sequence or structural similarity /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0032024 // positive regulation of insulin secretion // inferred from mutant phenotype /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0072350 // tricarboxylic acid metabolic process // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004352 // glutamate dehydrogenase (NAD+) activity // inferred from direct assay /// 0004353 // glutamate dehydrogenase [NAD(P)+] activity // not recorded /// 0004353 // glutamate dehydrogenase [NAD(P)+] activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016639 // oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0042802 // identical protein binding // traceable author statement /// 0043531 // ADP binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from direct assay /// 0070728 // leucine binding // inferred from direct assay </td> <td> -50.17 </td> <td> 268.86 </td> <td> -1.20 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201859_at </td> <td> 201859_at </td> <td> NM_002727 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002727.1 /DEF=Homo sapiens proteoglycan 1, secretory granule (PRG1), mRNA. /FEA=mRNA /GEN=PRG1 /PROD=proteoglycan 1, secretory granule /DB_XREF=gi:4506044 /UG=Hs.1908 proteoglycan 1, secretory granule /FL=gb:J03223.1 gb:NM_002727.1 </td> <td> NM_002727 </td> <td> serglycin </td> <td> SRGN </td> <td> 5552 </td> <td> NM_002727 /// NR_036430 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008626 // granzyme-mediated apoptotic signaling pathway // inferred from direct assay /// 0016485 // protein processing // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0030502 // negative regulation of bone mineralization // inferred from direct assay /// 0031214 // biomineral tissue development // inferred from electronic annotation /// 0033364 // mast cell secretory granule organization // inferred from sequence or structural similarity /// 0033371 // T cell secretory granule organization // inferred from sequence or structural similarity /// 0033373 // maintenance of protease location in mast cell secretory granule // inferred from sequence or structural similarity /// 0033382 // maintenance of granzyme B location in T cell secretory granule // inferred from sequence or structural similarity /// 0050710 // negative regulation of cytokine secretion // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0042588 // zymogen granule // inferred from electronic annotation /// 0042629 // mast cell granule // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation </td> <td> 118.45 </td> <td> 1195.65 </td> <td> 1.20 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201184_s_at </td> <td> 201184_s_at </td> <td> NM_001273 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001273.1 /DEF=Homo sapiens chromodomain helicase DNA binding protein 4 (CHD4), mRNA.  /FEA=mRNA /GEN=CHD4 /PROD=chromodomain helicase DNA binding protein 4 /DB_XREF=gi:4557452 /UG=Hs.74441 chromodomain helicase DNA binding protein 4 /FL=gb:NM_001273.1 </td> <td> NM_001273 </td> <td> chromodomain helicase DNA binding protein 4 </td> <td> CHD4 </td> <td> 1108 </td> <td> NM_001273 /// XM_005253668 /// XM_006718958 /// XM_006718959 /// XM_006718960 /// XM_006718961 /// XM_006718962 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006325 // chromatin organization // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0051225 // spindle assembly // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016581 // NuRD complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -30.77 </td> <td> 215.69 </td> <td> -1.20 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201954_at </td> <td> 201954_at </td> <td> NM_005720 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005720.1 /DEF=Homo sapiens actin related protein 23 complex, subunit 1A (41 kD) (ARPC1B), mRNA.  /FEA=mRNA /GEN=ARPC1B /PROD=actin related protein 23 complex, subunit 1A(41 kD) /DB_XREF=gi:5031600 /UG=Hs.11538 actin related protein 23 complex, subunit 1A (41 kD) /FL=gb:BC002562.1 gb:AF006084.1 gb:NM_005720.1 </td> <td> NM_005720 </td> <td> actin related protein 2/3 complex, subunit 1B, 41kDa </td> <td> ARPC1B </td> <td> 10095 </td> <td> NM_005720 /// XM_006715825 /// XM_006715826 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 77.73 </td> <td> 711.81 </td> <td> 1.20 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 208674_x_at </td> <td> 208674_x_at </td> <td> BC002594 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002594.1 /DEF=Homo sapiens, dolichyl-diphosphooligosaccharide-protein glycosyltransferase, clone MGC:2191, mRNA, complete cds.  /FEA=mRNA /PROD=dolichyl-diphosphooligosaccharide-proteinglycosyltransferase /DB_XREF=gi:12803530 /UG=Hs.34789 dolichyl-diphosphooligosaccharide-protein glycosyltransferase /FL=gb:BC002594.1 gb:D29643.1 gb:NM_005216.1 </td> <td> BC002594 </td> <td> dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) </td> <td> DDOST </td> <td> 1650 </td> <td> NM_005216 </td> <td> 0006412 // translation // traceable author statement /// 0006486 // protein glycosylation // inferred from sequence or structural similarity /// 0006487 // protein N-linked glycosylation // inferred from direct assay /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // inferred by curator /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0034097 // response to cytokine // inferred from direct assay /// 0042110 // T cell activation // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0008250 // oligosaccharyltransferase complex // inferred from sequence or structural similarity /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0004576 // oligosaccharyl transferase activity // inferred from sequence or structural similarity /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred by curator /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> 70.88 </td> <td> 452.01 </td> <td> 1.20 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 210996_s_at </td> <td> 210996_s_at </td> <td> U43430 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U43430.1 /DEF=Human epsilon isoform 14-3-3 protein mRNA, complete cds. /FEA=mRNA /PROD=14-3-3 protein /DB_XREF=gi:4096984 /UG=Hs.79474 tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, epsilon polypeptide /FL=gb:U43399.1 gb:U43430.1 </td> <td> U43430 </td> <td> tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon </td> <td> YWHAE </td> <td> 7531 </td> <td> NM_006761 /// NR_024058 /// XM_005256784 /// XM_006725298 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0003064 // regulation of heart rate by hormone // non-traceable author statement /// 0006605 // protein targeting // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0035308 // negative regulation of protein dephosphorylation // inferred from electronic annotation /// 0035329 // hippo signaling // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0043281 // regulation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0060306 // regulation of membrane repolarization // inferred from direct assay /// 0061024 // membrane organization // traceable author statement /// 0086013 // membrane repolarization during cardiac muscle cell action potential // inferred by curator /// 0086091 // regulation of heart rate by cardiac conduction // inferred by curator /// 0097190 // apoptotic signaling pathway // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement /// 1901016 // regulation of potassium ion transmembrane transporter activity // inferred from direct assay /// 1902309 // negative regulation of peptidyl-serine dephosphorylation // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005871 // kinesin complex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0023026 // MHC class II protein complex binding // inferred from direct assay /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0044325 // ion channel binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0050815 // phosphoserine binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from physical interaction </td> <td> 155.55 </td> <td> 690.67 </td> <td> 1.20 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 204825_at </td> <td> 204825_at </td> <td> NM_014791 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014791.1 /DEF=Homo sapiens KIAA0175 gene product (KIAA0175), mRNA. /FEA=mRNA /GEN=KIAA0175 /PROD=KIAA0175 gene product /DB_XREF=gi:7661973 /UG=Hs.184339 KIAA0175 gene product /FL=gb:D79997.1 gb:NM_014791.1 </td> <td> NM_014791 </td> <td> maternal embryonic leucine zipper kinase </td> <td> MELK </td> <td> 9833 </td> <td> NM_001256685 /// NM_001256687 /// NM_001256688 /// NM_001256689 /// NM_001256690 /// NM_001256691 /// NM_001256692 /// NM_001256693 /// NM_014791 /// NR_046337 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0008631 // intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from electronic annotation /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0061351 // neural precursor cell proliferation // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation </td> <td> -56.82 </td> <td> 313.46 </td> <td> -1.20 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 203250_at </td> <td> 203250_at </td> <td> NM_014892 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014892.1 /DEF=Homo sapiens KIAA1116 protein (KIAA1116), mRNA. /FEA=mRNA /GEN=KIAA1116 /PROD=KIAA1116 protein /DB_XREF=gi:7662491 /UG=Hs.227602 KIAA1116 protein /FL=gb:AB029039.1 gb:NM_014892.1 </td> <td> NM_014892 </td> <td> SR-related CTD-associated factor 8 </td> <td> SCAF8 </td> <td> 22828 </td> <td> NM_001286188 /// NM_001286189 /// NM_001286194 /// NM_001286199 /// NM_014892 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016363 // nuclear matrix // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0043175 // RNA polymerase core enzyme binding // inferred from physical interaction </td> <td> 27.25 </td> <td> 215.72 </td> <td> 1.20 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 217279_x_at </td> <td> 217279_x_at </td> <td> X83535 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X83535.1 /DEF=Homo sapiens mRNA for membrane-type matrix metalloproteinase. /FEA=mRNA /GEN=human 29 /PROD=MT-MMP /DB_XREF=gi:804993 /UG=Hs.2399 matrix metalloproteinase 14 (membrane-inserted) </td> <td> X83535 </td> <td> matrix metallopeptidase 14 (membrane-inserted) </td> <td> MMP14 </td> <td> 4323 </td> <td> NM_004995 </td> <td> 0001503 // ossification // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001935 // endothelial cell proliferation // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009725 // response to hormone // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030574 // collagen catabolic process // traceable author statement /// 0031638 // zymogen activation // inferred from electronic annotation /// 0043615 // astrocyte cell migration // inferred from electronic annotation /// 0043627 // response to estrogen // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0048771 // tissue remodeling // inferred from electronic annotation /// 0051895 // negative regulation of focal adhesion assembly // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 34.20 </td> <td> 96.90 </td> <td> 1.19 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 209259_s_at </td> <td> 209259_s_at </td> <td> AF020043 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF020043.1 /DEF=Homo sapiens chromosome-associated polypeptide (HCAP) mRNA, complete cds.  /FEA=mRNA /GEN=HCAP /PROD=chromosome-associated polypeptide /DB_XREF=gi:3089367 /UG=Hs.24485 chondroitin sulfate proteoglycan 6 (bamacan) /FL=gb:AF020043.1 gb:NM_005445.1 gb:AF067163.1 </td> <td> AF020043 </td> <td> structural maintenance of chromosomes 3 </td> <td> SMC3 </td> <td> 9126 </td> <td> NM_005445 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006275 // regulation of DNA replication // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007052 // mitotic spindle organization // inferred from expression pattern /// 0007062 // sister chromatid cohesion // inferred from mutant phenotype /// 0007062 // sister chromatid cohesion // non-traceable author statement /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007126 // meiotic nuclear division // inferred from direct assay /// 0007165 // signal transduction // inferred from direct assay /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0032876 // negative regulation of DNA endoreduplication // inferred from mutant phenotype /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // traceable author statement /// 0000785 // chromatin // inferred from direct assay /// 0000800 // lateral element // inferred from electronic annotation /// 0000922 // spindle pole // inferred from direct assay /// 0005604 // basement membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008278 // cohesin complex // non-traceable author statement /// 0016363 // nuclear matrix // inferred from direct assay /// 0030893 // meiotic cohesin complex // inferred from direct assay /// 0034991 // nuclear meiotic cohesin complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0036033 // mediator complex binding // inferred from electronic annotation /// 0045502 // dynein binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> 20.75 </td> <td> 137.12 </td> <td> 1.19 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201134_x_at </td> <td> 201134_x_at </td> <td> NM_001867 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001867.1 /DEF=Homo sapiens cytochrome c oxidase subunit VIIc (COX7C), mRNA. /FEA=mRNA /GEN=COX7C /PROD=cytochrome c oxidase subunit VIIc /DB_XREF=gi:4502992 /UG=Hs.3462 cytochrome c oxidase subunit VIIc /FL=gb:BC001005.1 gb:NM_001867.1 </td> <td> NM_001867 </td> <td> cytochrome c oxidase subunit VIIc </td> <td> COX7C </td> <td> 1350 </td> <td> NM_001867 </td> <td> 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation </td> <td> 40.92 </td> <td> 946.06 </td> <td> 1.19 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211505_s_at </td> <td> 211505_s_at </td> <td> AL136601 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136601.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564J1516 (from clone DKFZp564J1516); complete cds.  /FEA=mRNA /GEN=DKFZp564J1516 /PROD=hypothetical protein /DB_XREF=gi:13276702 /UG=Hs.6113 staufen (Drosophila, RNA-binding protein) /FL=gb:AL136601.1 </td> <td> AL136601 </td> <td> staufen double-stranded RNA binding protein 1 </td> <td> STAU1 </td> <td> 6780 </td> <td> NM_001037328 /// NM_004602 /// NM_017452 /// NM_017453 /// NM_017454 /// XM_005260524 /// XM_005260525 /// XM_005260526 /// XM_005260527 /// XM_005260528 /// XM_005260529 /// XM_006723865 /// XM_006723866 /// XM_006723867 /// XM_006723868 /// XM_006723869 </td> <td> 0008298 // intracellular mRNA localization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044297 // cell body // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008157 // protein phosphatase 1 binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -31.15 </td> <td> 251.15 </td> <td> -1.19 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 213843_x_at </td> <td> 213843_x_at </td> <td> AW276522 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW276522 /FEA=EST /DB_XREF=gi:6663552 /DB_XREF=est:xr15a02.x1 /CLONE=IMAGE:2760170 /UG=Hs.291904 accessory proteins BAP31BAP29 </td> <td> AW276522 </td> <td> solute carrier family 6 (neurotransmitter transporter), member 8 </td> <td> SLC6A8 </td> <td> 6535 </td> <td> NM_001142805 /// NM_001142806 /// NM_005629 </td> <td> 0006600 // creatine metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0015871 // choline transport // inferred from electronic annotation /// 0015881 // creatine transport // non-traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 1902598 // creatine transmembrane transport // inferred from electronic annotation /// 1902598 // creatine transmembrane transport // non-traceable author statement /// 1902598 // creatine transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement </td> <td> 0005308 // creatine transmembrane transporter activity // non-traceable author statement /// 0005309 // creatine:sodium symporter activity // inferred from electronic annotation /// 0005328 // neurotransmitter:sodium symporter activity // inferred from electronic annotation /// 0015220 // choline transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation </td> <td> -19.75 </td> <td> 93.72 </td> <td> -1.19 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202564_x_at </td> <td> 202564_x_at </td> <td> NM_001667 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001667.1 /DEF=Homo sapiens ADP-ribosylation factor-like 2 (ARL2), mRNA. /FEA=mRNA /GEN=ARL2 /PROD=ADP-ribosylation factor-like 2 /DB_XREF=gi:4502228 /UG=Hs.154162 ADP-ribosylation factor-like 2 /FL=gb:BC002530.1 gb:L13687.1 gb:NM_001667.1 </td> <td> NM_001667 </td> <td> ADP-ribosylation factor-like 2 </td> <td> ARL2 </td> <td> 402 </td> <td> NM_001199745 /// NM_001667 </td> <td> 0006184 // GTP catabolic process // inferred from mutant phenotype /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007021 // tubulin complex assembly // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0031113 // regulation of microtubule polymerization // inferred from mutant phenotype /// 0031116 // positive regulation of microtubule polymerization // inferred from direct assay /// 0034260 // negative regulation of GTPase activity // inferred from direct assay /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0051457 // maintenance of protein location in nucleus // inferred from direct assay /// 0070830 // tight junction assembly // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from mutant phenotype /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005095 // GTPase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from mutant phenotype /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation </td> <td> -32.48 </td> <td> 249.44 </td> <td> -1.19 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 213491_x_at </td> <td> 213491_x_at </td> <td> AL514285 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL514285 /FEA=EST /DB_XREF=gi:12777779 /DB_XREF=est:AL514285 /CLONE=CL0BB007ZF04 (3 prime) /UG=Hs.75722 ribophorin II </td> <td> AL514285 </td> <td> ribophorin II </td> <td> RPN2 </td> <td> 6185 </td> <td> NM_001135771 /// NM_002951 /// XM_005260491 /// XM_006723849 /// XM_006723850 /// XM_006723851 /// XM_006723852 </td> <td> 0006412 // translation // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // non-traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from electronic annotation </td> <td> -183.50 </td> <td> 1302.40 </td> <td> -1.19 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 213989_x_at </td> <td> 213989_x_at </td> <td> AB004853 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB004853.1 /DEF=Homo sapiens mRNA expressed in neuron, clone IMAGE:546180. /FEA=mRNA /DB_XREF=gi:3702687 /UG=Hs.50748 chromosome 21 open reading frame 18 </td> <td> AB004853 </td> <td> SET domain containing 4 </td> <td> SETD4 </td> <td> 54093 </td> <td> NM_001007258 /// NM_001007259 /// NM_001007260 /// NM_001007261 /// NM_001007262 /// NM_001286752 /// NM_017438 /// NR_040087 /// XM_005260999 /// XM_005261000 /// XM_005261001 /// XM_005261003 /// XM_006724021 /// XM_006724022 /// XM_006724023 /// XR_244283 /// XR_430350 </td> <td> 0032259 // methylation // inferred from electronic annotation </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 16.95 </td> <td> 45.17 </td> <td> 1.19 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 213366_x_at </td> <td> 213366_x_at </td> <td> AV711183 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV711183 /FEA=EST /DB_XREF=gi:10730489 /DB_XREF=est:AV711183 /CLONE=CuAAOG09 /UG=Hs.155433 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 </td> <td> AV711183 </td> <td> ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 </td> <td> ATP5C1 </td> <td> 509 </td> <td> NM_001001973 /// NM_005174 </td> <td> 0006119 // oxidative phosphorylation // non-traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // non-traceable author statement /// 0006754 // ATP biosynthetic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) // non-traceable author statement /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // non-traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // non-traceable author statement /// 0022857 // transmembrane transporter activity // inferred by curator /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation </td> <td> -87.22 </td> <td> 1192.16 </td> <td> -1.19 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 212077_at </td> <td> 212077_at </td> <td> AL583520 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL583520 /FEA=EST /DB_XREF=gi:12952562 /DB_XREF=est:AL583520 /CLONE=CS0DC024YE13 (5 prime) /UG=Hs.182183 Homo sapiens mRNA for caldesmon, 3 UTR </td> <td> AL583520 </td> <td> caldesmon 1 </td> <td> CALD1 </td> <td> 800 </td> <td> NM_004342 /// NM_033138 /// NM_033139 /// NM_033140 /// NM_033157 /// XM_006716136 /// XM_006716137 /// XM_006716138 /// XM_006716139 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030478 // actin cap // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation </td> <td> -130.30 </td> <td> 1447.05 </td> <td> -1.18 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200960_x_at </td> <td> 200960_x_at </td> <td> NM_007096 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007096.1 /DEF=Homo sapiens clathrin, light polypeptide (Lca) (CLTA), transcript variant brain-specific, mRNA.  /FEA=mRNA /GEN=CLTA /PROD=clathrin, light polypeptide A (Lca) isoform b /DB_XREF=gi:6005992 /UG=Hs.104143 clathrin, light polypeptide (Lca) /FL=gb:M20471.1 gb:NM_007096.1 </td> <td> NM_007096 </td> <td> clathrin, light chain A </td> <td> CLTA </td> <td> 1211 </td> <td> NM_001076677 /// NM_001184760 /// NM_001184761 /// NM_001184762 /// NM_001833 /// NM_007096 </td> <td> 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from sequence or structural similarity /// 0030118 // clathrin coat // non-traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // inferred from electronic annotation /// 0030132 // clathrin coat of coated pit // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071439 // clathrin complex // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032050 // clathrin heavy chain binding // inferred from physical interaction /// 0042277 // peptide binding // inferred from electronic annotation </td> <td> 21.25 </td> <td> 1002.20 </td> <td> 1.18 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 213867_x_at </td> <td> 213867_x_at </td> <td> AA809056 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA809056 /FEA=EST /DB_XREF=gi:2878462 /DB_XREF=est:nw17a02.s1 /CLONE=IMAGE:1240682 /UG=Hs.288061 actin, beta </td> <td> AA809056 </td> <td> actin, beta </td> <td> ACTB </td> <td> 60 </td> <td> NM_001101 /// XM_006715764 </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0006325 // chromatin organization // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction </td> <td> -691.90 </td> <td> 5177.38 </td> <td> -1.18 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 210588_x_at </td> <td> 210588_x_at </td> <td> L32610 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L32610.1 /DEF=Homo sapiens ribonucleoprotein mRNA, complete cds. /FEA=mRNA /PROD=ribonucleoprotein /DB_XREF=gi:5542019 /UG=Hs.279681 heterogeneous nuclear ribonucleoprotein H3 (2H9) /FL=gb:L32610.1 </td> <td> L32610 </td> <td> heterogeneous nuclear ribonucleoprotein H3 (2H9) </td> <td> HNRNPH3 </td> <td> 3189 </td> <td> NM_012207 /// NM_021644 /// XM_005269748 /// XM_005269749 /// XM_005269751 /// XM_005269752 /// XM_005269753 /// XM_005269754 /// XM_006717816 /// XM_006717817 </td> <td> 0000398 // mRNA splicing, via spliceosome // non-traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 51.80 </td> <td> 285.23 </td> <td> 1.18 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211971_s_at </td> <td> 211971_s_at </td> <td> AI653608 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI653608 /FEA=EST /DB_XREF=gi:4737587 /DB_XREF=est:tz21a06.x1 /CLONE=IMAGE:2289202 /UG=Hs.182490 leucine-rich protein mRNA </td> <td> AI653608 </td> <td> leucine-rich pentatricopeptide repeat containing </td> <td> LRPPRC </td> <td> 10128 </td> <td> NM_133259 /// XM_006711915 /// XM_006711916 </td> <td> 0000961 // negative regulation of mitochondrial RNA catabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0047497 // mitochondrion transport along microtubule // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0070129 // regulation of mitochondrial translation // inferred from electronic annotation </td> <td> 0000794 // condensed nuclear chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005856 // cytoskeleton // inferred from direct assay /// 0005874 // microtubule // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from direct assay </td> <td> -45.77 </td> <td> 444.99 </td> <td> -1.18 </td> <td> 0.27 </td> <td> 0.35 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201726_at </td> <td> 201726_at </td> <td> BC003376 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003376.1 /DEF=Homo sapiens, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R), clone MGC:5084, mRNA, complete cds.  /FEA=mRNA /PROD=ELAV (embryonic lethal, abnormal vision,Drosophila)-like 1 (Hu antigen R) /DB_XREF=gi:13097227 /UG=Hs.12379 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) /FL=gb:U38175.1 gb:BC003376.1 gb:NM_001419.1 </td> <td> BC003376 </td> <td> ELAV like RNA binding protein 1 </td> <td> ELAVL1 </td> <td> 1994 </td> <td> NM_001419 /// XR_430131 </td> <td> 0006417 // regulation of translation // inferred from mutant phenotype /// 0007275 // multicellular organismal development // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from direct assay /// 0048255 // mRNA stabilization // inferred from direct assay /// 0048255 // mRNA stabilization // inferred from mutant phenotype /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from mutant phenotype /// 2000036 // regulation of stem cell maintenance // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003729 // mRNA binding // traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0017091 // AU-rich element binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0035925 // mRNA 3'-UTR AU-rich region binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 51.90 </td> <td> 617.20 </td> <td> 1.18 </td> <td> 0.27 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202422_s_at </td> <td> 202422_s_at </td> <td> NM_022977 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022977.1 /DEF=Homo sapiens fatty-acid-Coenzyme A ligase, long-chain 4 (FACL4), transcript variant 2, mRNA.  /FEA=mRNA /GEN=FACL4 /PROD=long-chain fatty-acid-Coenzyme A ligase 4,isoform 2 /DB_XREF=gi:12669908 /UG=Hs.81452 fatty-acid-Coenzyme A ligase, long-chain 4 /FL=gb:NM_022977.1 </td> <td> NM_022977 </td> <td> acyl-CoA synthetase long-chain family member 4 </td> <td> ACSL4 </td> <td> 2182 </td> <td> NM_004458 /// NM_022977 /// XM_005262108 /// XM_005262109 /// XM_005262110 /// XM_006724635 </td> <td> 0001676 // long-chain fatty acid metabolic process // inferred from direct assay /// 0001676 // long-chain fatty acid metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from direct assay /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from direct assay /// 0015908 // fatty acid transport // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0032307 // negative regulation of prostaglandin secretion // inferred from direct assay /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0060136 // embryonic process involved in female pregnancy // inferred from electronic annotation /// 0060996 // dendritic spine development // inferred from electronic annotation /// 0070672 // response to interleukin-15 // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005811 // lipid particle // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004467 // long-chain fatty acid-CoA ligase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031957 // very long-chain fatty acid-CoA ligase activity // inferred from mutant phenotype /// 0047676 // arachidonate-CoA ligase activity // inferred from direct assay </td> <td> 25.85 </td> <td> 119.28 </td> <td> 1.18 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200929_at </td> <td> 200929_at </td> <td> NM_006827 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006827.1 /DEF=Homo sapiens transmembrane trafficking protein (TMP21), mRNA. /FEA=mRNA /GEN=TMP21 /PROD=transmembrane trafficking protein /DB_XREF=gi:5803200 /UG=Hs.74137 transmembrane trafficking protein /FL=gb:BC001825.1 gb:NM_006827.1 </td> <td> NM_006827 </td> <td> transmembrane emp24-like trafficking protein 10 (yeast) </td> <td> TMED10 </td> <td> 10972 </td> <td> NM_006827 </td> <td> 0001101 // response to acid // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from direct assay /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from sequence or structural similarity /// 0007030 // Golgi organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0034205 // beta-amyloid formation // inferred from mutant phenotype /// 0035459 // cargo loading into vesicle // traceable author statement /// 0035964 // COPI-coated vesicle budding // inferred from direct assay /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0045055 // regulated secretory pathway // inferred from sequence or structural similarity /// 0048199 // vesicle targeting, to, from or within Golgi // inferred from sequence or structural similarity /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0051259 // protein oligomerization // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from direct assay /// 0000139 // Golgi membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005801 // cis-Golgi network // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from sequence or structural similarity /// 0030137 // COPI-coated vesicle // inferred from sequence or structural similarity /// 0030140 // trans-Golgi network transport vesicle // inferred from sequence or structural similarity /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0030667 // secretory granule membrane // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042589 // zymogen granule membrane // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070765 // gamma-secretase complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019905 // syntaxin binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> -85.60 </td> <td> 509.48 </td> <td> -1.18 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200981_x_at </td> <td> 200981_x_at </td> <td> NM_016592 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016592.1 /DEF=Homo sapiens neuroendocrine secretory protein 55 (NESP55), mRNA. /FEA=mRNA /GEN=NESP55 /PROD=neuroendocrine secretory protein 55 /DB_XREF=gi:7706588 /UG=Hs.113368 neuroendocrine secretory protein 55 /FL=gb:AF105253.1 gb:NM_016592.1 </td> <td> NM_016592 </td> <td> GNAS complex locus </td> <td> GNAS </td> <td> 2778 </td> <td> NM_000516 /// NM_001077488 /// NM_001077489 /// NM_001077490 /// NM_016592 /// NM_080425 /// NM_080426 /// NR_003259 /// XM_005260401 /// XM_005260402 /// XM_006723781 /// XM_006723782 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // not recorded /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007565 // female pregnancy // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007606 // sensory perception of chemical stimulus // not recorded /// 0007608 // sensory perception of smell // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0009306 // protein secretion // non-traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040015 // negative regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040032 // post-embryonic body morphogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043950 // positive regulation of cAMP-mediated signaling // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0046907 // intracellular transport // non-traceable author statement /// 0048589 // developmental growth // inferred from direct assay /// 0048589 // developmental growth // inferred from mutant phenotype /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050890 // cognition // inferred from direct assay /// 0050890 // cognition // inferred from mutant phenotype /// 0051216 // cartilage development // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060348 // bone development // inferred from direct assay /// 0060348 // bone development // inferred from mutant phenotype /// 0060789 // hair follicle placode formation // inferred from direct assay /// 0060789 // hair follicle placode formation // inferred from mutant phenotype /// 0070527 // platelet aggregation // inferred from direct assay /// 0070527 // platelet aggregation // inferred from mutant phenotype /// 0071107 // response to parathyroid hormone // inferred from mutant phenotype /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071514 // genetic imprinting // inferred from electronic annotation /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity /// 0071880 // adenylate cyclase-activating adrenergic receptor signaling pathway // inferred from direct assay </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from sequence or structural similarity /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031224 // intrinsic component of membrane // inferred from direct assay /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // not recorded /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004016 // adenylate cyclase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from direct assay /// 0005159 // insulin-like growth factor receptor binding //  /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0031698 // beta-2 adrenergic receptor binding //  /// 0031748 // D1 dopamine receptor binding //  /// 0031852 // mu-type opioid receptor binding // not recorded /// 0035255 // ionotropic glutamate receptor binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051430 // corticotropin-releasing hormone receptor 1 binding // </td> <td> -341.93 </td> <td> 2284.91 </td> <td> -1.18 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 203215_s_at </td> <td> 203215_s_at </td> <td> AA877789 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA877789 /FEA=EST /DB_XREF=gi:2986754 /DB_XREF=est:nr06h10.s1 /CLONE=IMAGE:1161091 /UG=Hs.22564 myosin VI /FL=gb:AB002387.1 gb:NM_004999.1 </td> <td> AA877789 </td> <td> myosin VI </td> <td> MYO6 </td> <td> 4646 </td> <td> NM_004999 /// XM_005248719 /// XM_005248720 /// XM_005248721 /// XM_005248722 /// XM_005248724 /// XM_005248725 /// XM_005248726 </td> <td> 0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0007268 // synaptic transmission // traceable author statement /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from sequence or structural similarity /// 0008152 // metabolic process // non-traceable author statement /// 0014047 // glutamate secretion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0030048 // actin filament-based movement // non-traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051046 // regulation of secretion // inferred from mutant phenotype /// 0061024 // membrane organization // traceable author statement /// 0071257 // cellular response to electrical stimulus // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0031941 // filamentous actin // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from sequence or structural similarity /// 0003779 // actin binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from sequence or structural similarity /// 0005516 // calmodulin binding // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from sequence or structural similarity /// 0060001 // minus-end directed microfilament motor activity // non-traceable author statement </td> <td> -18.97 </td> <td> 104.69 </td> <td> -1.18 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 215179_x_at </td> <td> 215179_x_at </td> <td> AK023843 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK023843.1 /DEF=Homo sapiens cDNA FLJ13781 fis, clone PLACE4000465. /FEA=mRNA /DB_XREF=gi:10435902 /UG=Hs.252820 Homo sapiens cDNA FLJ13781 fis, clone PLACE4000465 </td> <td> AK023843 </td> <td> placental growth factor </td> <td> PGF </td> <td> 5228 </td> <td> NM_001207012 /// NM_001293643 /// NM_002632 /// XM_005267761 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060688 // regulation of morphogenesis of a branching structure // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from mutant phenotype /// 0008201 // heparin binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 32.08 </td> <td> 165.11 </td> <td> 1.18 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200751_s_at </td> <td> 200751_s_at </td> <td> BE898861 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE898861 /FEA=EST /DB_XREF=gi:10365758 /DB_XREF=est:601682157F1 /CLONE=IMAGE:3952046 /UG=Hs.182447 heterogeneous nuclear ribonucleoprotein C (C1C2) /FL=gb:BC003394.1 gb:M16342.1 gb:NM_004500.1 </td> <td> BE898861 </td> <td> heterogeneous nuclear ribonucleoprotein C (C1/C2) </td> <td> HNRNPC </td> <td> 3183 </td> <td> NM_001077442 /// NM_001077443 /// NM_004500 /// NM_031314 /// XM_006720124 /// XM_006720125 /// XM_006720126 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0045120 // pronucleus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003729 // mRNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008266 // poly(U) RNA binding // inferred from direct assay /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -79.17 </td> <td> 346.16 </td> <td> -1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 209313_at </td> <td> 209313_at </td> <td> AB044661 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB044661.1 /DEF=Homo sapiens XAB1 mRNA for XPA binding protein 1, complete cds. /FEA=mRNA /GEN=XAB1 /PROD=XPA binding protein 1 /DB_XREF=gi:11094140 /UG=Hs.18259 XPA binding protein 1; putative ATP(GTP)-binding protein /FL=gb:AB044661.1 </td> <td> AB044661 </td> <td> GPN-loop GTPase 1 </td> <td> GPN1 </td> <td> 11321 </td> <td> NM_001145047 /// NM_001145048 /// NM_001145049 /// NM_007266 /// NR_026735 </td> <td> 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0051457 // maintenance of protein location in nucleus // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030914 // STAGA complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> 38.98 </td> <td> 201.86 </td> <td> 1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200741_s_at </td> <td> 200741_s_at </td> <td> NM_001030 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001030.1 /DEF=Homo sapiens ribosomal protein S27 (metallopanstimulin 1) (RPS27), mRNA.  /FEA=mRNA /GEN=RPS27 /PROD=ribosomal protein S27 (metallopanstimulin 1) /DB_XREF=gi:4506710 /UG=Hs.195453 ribosomal protein S27 (metallopanstimulin 1) /FL=gb:U57847.1 gb:L19739.1 gb:NM_001030.1 </td> <td> NM_001030 </td> <td> ribosomal protein S27 </td> <td> RPS27 </td> <td> 6232 </td> <td> NM_001030 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -223.65 </td> <td> 2829.78 </td> <td> -1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201950_x_at </td> <td> 201950_x_at </td> <td> NM_004930 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004930.1 /DEF=Homo sapiens capping protein (actin filament) muscle Z-line, beta (CAPZB), mRNA.  /FEA=mRNA /GEN=CAPZB /PROD=F-actin capping protein beta subunit /DB_XREF=gi:4826658 /UG=Hs.76368 capping protein (actin filament) muscle Z-line, beta /FL=gb:NM_004930.1 gb:U03271.1 </td> <td> NM_004930 </td> <td> capping protein (actin filament) muscle Z-line, beta </td> <td> CAPZB </td> <td> 832 </td> <td> NM_001206540 /// NM_001206541 /// NM_001282162 /// NM_004930 /// XM_006710938 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0031115 // negative regulation of microtubule polymerization // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0048747 // muscle fiber development // inferred from electronic annotation /// 0051016 // barbed-end actin filament capping // inferred from electronic annotation /// 0051693 // actin filament capping // inferred from electronic annotation /// 0090036 // regulation of protein kinase C signaling // inferred from electronic annotation </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0008290 // F-actin capping protein complex // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030017 // sarcomere // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071203 // WASH complex // inferred from direct assay </td> <td> 0003779 // actin binding // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation </td> <td> -58.75 </td> <td> 469.12 </td> <td> -1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 203430_at </td> <td> 203430_at </td> <td> NM_014320 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014320.1 /DEF=Homo sapiens putative heme-binding protein (SOUL), mRNA. /FEA=mRNA /GEN=SOUL /PROD=putative heme-binding protein /DB_XREF=gi:7657602 /UG=Hs.111029 putative heme-binding protein /FL=gb:AF117616.1 gb:NM_014320.1 </td> <td> NM_014320 </td> <td> heme binding protein 2 </td> <td> HEBP2 </td> <td> 23593 </td> <td> NM_014320 </td> <td> 0010917 // negative regulation of mitochondrial membrane potential // inferred from mutant phenotype /// 0010940 // positive regulation of necrotic cell death // inferred from mutant phenotype /// 0035794 // positive regulation of mitochondrial membrane permeability // inferred from mutant phenotype /// 1901031 // regulation of response to reactive oxygen species // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 31.20 </td> <td> 389.77 </td> <td> 1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 218839_at </td> <td> 218839_at </td> <td> NM_012258 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012258.1 /DEF=Homo sapiens hairyenhancer-of-split related with YRPW motif 1 (HEY1), mRNA.  /FEA=mRNA /GEN=HEY1 /PROD=hairyenhancer-of-split related with YRPW motif1 /DB_XREF=gi:6912411 /UG=Hs.234434 hairyenhancer-of-split related with YRPW motif 1 /FL=gb:AF311883.1 gb:BC001873.1 gb:AF151522.1 gb:AF176422.1 gb:NM_012258.1 gb:AF232239.1 </td> <td> NM_012258 </td> <td> hes-related family bHLH transcription factor with YRPW motif 1 </td> <td> HEY1 </td> <td> 23462 </td> <td> NM_001040708 /// NM_001282851 /// NM_012258 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001525 // angiogenesis // inferred from expression pattern /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0003184 // pulmonary valve morphogenesis // inferred from sequence or structural similarity /// 0003190 // atrioventricular valve formation // inferred from sequence or structural similarity /// 0003198 // epithelial to mesenchymal transition involved in endocardial cushion formation // inferred from sequence or structural similarity /// 0003199 // endocardial cushion to mesenchymal transition involved in heart valve formation // inferred from electronic annotation /// 0003203 // endocardial cushion morphogenesis // inferred from sequence or structural similarity /// 0003208 // cardiac ventricle morphogenesis // inferred from sequence or structural similarity /// 0003222 // ventricular trabecula myocardium morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009948 // anterior/posterior axis specification // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0035912 // dorsal aorta morphogenesis // inferred from sequence or structural similarity /// 0036304 // umbilical cord morphogenesis // inferred from sequence or structural similarity /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0060347 // heart trabecula formation // inferred from sequence or structural similarity /// 0060411 // cardiac septum morphogenesis // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060716 // labyrinthine layer blood vessel development // inferred from sequence or structural similarity /// 0060840 // artery development // inferred from electronic annotation /// 0060842 // arterial endothelial cell differentiation // inferred from sequence or structural similarity /// 0061314 // Notch signaling involved in heart development // inferred by curator /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation /// 2000678 // negative regulation of transcription regulatory region DNA binding // inferred from direct assay /// 2000820 // negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation // inferred from direct assay /// 2001212 // regulation of vasculogenesis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from sequence or structural similarity </td> <td> 0000983 // RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0000988 // protein binding transcription factor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // non-traceable author statement /// 0035939 // microsatellite binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -15.32 </td> <td> 26.06 </td> <td> -1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201343_at </td> <td> 201343_at </td> <td> BE621259 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE621259 /FEA=EST /DB_XREF=gi:9892197 /DB_XREF=est:601493415F1 /CLONE=IMAGE:3895850 /UG=Hs.108332 ubiquitin-conjugating enzyme E2D 2 (homologous to yeast UBC45) /FL=gb:U39317.1 gb:NM_003339.1 </td> <td> BE621259 </td> <td> ubiquitin-conjugating enzyme E2D 2 </td> <td> UBE2D2 </td> <td> 7322 </td> <td> NM_003339 /// NM_181838 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0071456 // cellular response to hypoxia // traceable author statement </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> 55.18 </td> <td> 439.29 </td> <td> 1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 214730_s_at </td> <td> 214730_s_at </td> <td> AK025457 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK025457.1 /DEF=Homo sapiens cDNA: FLJ21804 fis, clone HEP00746, highly similar to HSU64791 Human Golgi membrane sialoglycoprotein MG160 (GLG1) mRNA.  /FEA=mRNA /DB_XREF=gi:10437977 /UG=Hs.78979 Golgi apparatus protein 1 </td> <td> AK025457 </td> <td> golgi glycoprotein 1 </td> <td> GLG1 </td> <td> 2734 </td> <td> NM_001145666 /// NM_001145667 /// NM_012201 /// NR_027264 /// NR_027265 </td> <td> 0007596 // blood coagulation // traceable author statement /// 0010955 // negative regulation of protein processing // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0032330 // regulation of chondrocyte differentiation // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0060349 // bone morphogenesis // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // traceable author statement </td> <td> -22.38 </td> <td> 377.61 </td> <td> -1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 204805_s_at </td> <td> 204805_s_at </td> <td> NM_006026 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006026.1 /DEF=Homo sapiens H1 histone family, member X (H1FX), mRNA. /FEA=mRNA /GEN=H1FX /PROD=H1 histone family, member X /DB_XREF=gi:5174448 /UG=Hs.109804 H1 histone family, member X /FL=gb:BC000426.1 gb:D64142.1 gb:NM_006026.1 </td> <td> NM_006026 </td> <td> H1 histone family, member X </td> <td> H1FX </td> <td> 8971 </td> <td> NM_006026 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation </td> <td> 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 28.30 </td> <td> 144.80 </td> <td> 1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200736_s_at </td> <td> 200736_s_at </td> <td> NM_000581 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000581.1 /DEF=Homo sapiens glutathione peroxidase 1 (GPX1), mRNA. /FEA=mRNA /GEN=GPX1 /PROD=glutathione peroxidase 1 /DB_XREF=gi:10834975 /UG=Hs.76686 glutathione peroxidase 1 /FL=gb:NM_000581.1 gb:BC000742.1 gb:M21304.1 </td> <td> NM_000581 </td> <td> glutathione peroxidase 1 </td> <td> GPX1 </td> <td> 2876 </td> <td> NM_000581 /// NM_201397 </td> <td> 0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0001659 // temperature homeostasis // inferred from electronic annotation /// 0001885 // endothelial cell development // inferred from electronic annotation /// 0002862 // negative regulation of inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006195 // purine nucleotide catabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006749 // glutathione metabolic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0006982 // response to lipid hydroperoxide // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008631 // intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from electronic annotation /// 0009410 // response to xenobiotic stimulus // inferred from electronic annotation /// 0009609 // response to symbiotic bacterium // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0009650 // UV protection // inferred from mutant phenotype /// 0009725 // response to hormone // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0010269 // response to selenium ion // inferred from mutant phenotype /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0018158 // protein oxidation // inferred from electronic annotation /// 0019369 // arachidonic acid metabolic process // traceable author statement /// 0019372 // lipoxygenase pathway // traceable author statement /// 0032355 // response to estradiol // inferred from electronic annotation /// 0033194 // response to hydroperoxide // inferred from electronic annotation /// 0033599 // regulation of mammary gland epithelial cell proliferation // inferred from mutant phenotype /// 0035094 // response to nicotine // inferred from electronic annotation /// 0040029 // regulation of gene expression, epigenetic // inferred from direct assay /// 0042311 // vasodilation // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from mutant phenotype /// 0042744 // hydrogen peroxide catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043403 // skeletal muscle tissue regeneration // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043534 // blood vessel endothelial cell migration // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from direct assay /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0051450 // myoblast proliferation // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0051702 // interaction with symbiont // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060047 // heart contraction // inferred from mutant phenotype /// 0060055 // angiogenesis involved in wound healing // inferred from electronic annotation /// 0061136 // regulation of proteasomal protein catabolic process // inferred from direct assay /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 1902176 // negative regulation of intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004601 // peroxidase activity // inferred from electronic annotation /// 0004602 // glutathione peroxidase activity // inferred from direct assay /// 0004602 // glutathione peroxidase activity // traceable author statement /// 0004866 // endopeptidase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0008430 // selenium binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0043295 // glutathione binding // inferred from electronic annotation /// 0047066 // phospholipid-hydroperoxide glutathione peroxidase activity // inferred from electronic annotation </td> <td> 141.45 </td> <td> 790.85 </td> <td> 1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202334_s_at </td> <td> 202334_s_at </td> <td> AI768723 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI768723 /FEA=EST /DB_XREF=gi:5235232 /DB_XREF=est:wh25c12.x1 /CLONE=IMAGE:2381782 /UG=Hs.811 ubiquitin-conjugating enzyme E2B (RAD6 homolog) /FL=gb:M74525.1 gb:NM_003337.1 </td> <td> AI768723 </td> <td> ubiquitin-conjugating enzyme E2B </td> <td> UBE2B </td> <td> 7320 </td> <td> NM_003337 </td> <td> 0000209 // protein polyubiquitination // inferred from mutant phenotype /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006281 // DNA repair // inferred from genetic interaction /// 0006301 // postreplication repair // inferred from direct assay /// 0006301 // postreplication repair // non-traceable author statement /// 0006344 // maintenance of chromatin silencing // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0006513 // protein monoubiquitination // inferred from mutant phenotype /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0007283 // spermatogenesis // traceable author statement /// 0007288 // sperm axoneme assembly // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009411 // response to UV // inferred from genetic interaction /// 0010845 // positive regulation of reciprocal meiotic recombination // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031056 // regulation of histone modification // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0033128 // negative regulation of histone phosphorylation // inferred from electronic annotation /// 0033522 // histone H2A ubiquitination // inferred from mutant phenotype /// 0042493 // response to drug // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043951 // negative regulation of cAMP-mediated signaling // inferred from direct assay /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0051026 // chiasma assembly // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0060070 // canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 0070076 // histone lysine demethylation // inferred from electronic annotation /// 0070193 // synaptonemal complex organization // inferred from electronic annotation /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0000785 // chromatin // inferred from sequence or structural similarity /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0001741 // XY body // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005657 // replication fork // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033503 // HULC complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> -23.88 </td> <td> 151.06 </td> <td> -1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200682_s_at </td> <td> 200682_s_at </td> <td> BG531983 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG531983 /FEA=EST /DB_XREF=gi:13523521 /DB_XREF=est:602561007F1 /CLONE=IMAGE:4699176 /UG=Hs.108104 ubiquitin-conjugating enzyme E2L 3 /FL=gb:NM_003347.1 </td> <td> BG531983 </td> <td> ubiquitin-conjugating enzyme E2L 3 </td> <td> UBE2L3 </td> <td> 7332 </td> <td> NM_001256355 /// NM_001256356 /// NM_003347 /// NM_198157 /// NR_028436 /// NR_046082 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0071383 // cellular response to steroid hormone stimulus // inferred from mutant phenotype /// 0071385 // cellular response to glucocorticoid stimulus // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 49.57 </td> <td> 818.81 </td> <td> 1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 217266_at </td> <td> 217266_at </td> <td> Z97353 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:Z97353 /DEF=Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23 Contains an RPL15 (60S Ribosomal Protein L15) pseudogene, ESTs, STSs and GSSs /FEA=CDS /DB_XREF=gi:4455632 /UG=Hs.247851 Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23 Contains an RPL15 (60S Ribosomal Protein L15) pseudogene, ESTs, STSs and GSSs </td> <td> Z97353 </td> <td> ribosomal protein L15 </td> <td> RPL15 </td> <td> 6138 </td> <td> NM_001253379 /// NM_001253380 /// NM_001253382 /// NM_001253383 /// NM_001253384 /// NM_002948 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // traceable author statement /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -31.18 </td> <td> 137.06 </td> <td> -1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202058_s_at </td> <td> 202058_s_at </td> <td> BC002374 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002374.1 /DEF=Homo sapiens, karyopherin alpha 1 (importin alpha 5), clone MGC:8554, mRNA, complete cds.  /FEA=mRNA /PROD=karyopherin alpha 1 (importin alpha 5) /DB_XREF=gi:12803140 /UG=Hs.169149 karyopherin alpha 1 (importin alpha 5) /FL=gb:BC002374.1 gb:BC003009.1 gb:NM_002264.1 </td> <td> BC002374 </td> <td> karyopherin alpha 1 (importin alpha 5) </td> <td> KPNA1 </td> <td> 3836 </td> <td> NM_002264 /// NR_026698 /// XM_005247437 /// XM_005247439 </td> <td> 0000018 // regulation of DNA recombination // traceable author statement /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0042307 // positive regulation of protein import into nucleus // inferred from sequence or structural similarity /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0030425 // dendrite // inferred from sequence or structural similarity </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> -23.43 </td> <td> 119.11 </td> <td> -1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 213399_x_at </td> <td> 213399_x_at </td> <td> AI560720 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI560720 /FEA=EST /DB_XREF=gi:4511061 /DB_XREF=est:tq55e12.x1 /CLONE=IMAGE:2212750 /UG=Hs.75722 ribophorin II </td> <td> AI560720 </td> <td> ribophorin II </td> <td> RPN2 </td> <td> 6185 </td> <td> NM_001135771 /// NM_002951 /// XM_005260491 /// XM_006723849 /// XM_006723850 /// XM_006723851 /// XM_006723852 </td> <td> 0006412 // translation // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // non-traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from electronic annotation </td> <td> -150.40 </td> <td> 1282.08 </td> <td> -1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 208827_at </td> <td> 208827_at </td> <td> BC000835 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000835.1 /DEF=Homo sapiens, Similar to proteasome (prosome, macropain) subunit, beta type 6, clone MGC:5169, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to proteasome (prosome, macropain)subunit, beta type 6 /DB_XREF=gi:12654058 /UG=Hs.77060 proteasome (prosome, macropain) subunit, beta type, 6 /FL=gb:BC000835.1 gb:D29012.1 </td> <td> BC000835 </td> <td> proteasome (prosome, macropain) subunit, beta type, 6 </td> <td> PSMB6 </td> <td> 5694 </td> <td> NM_001270481 /// NM_002798 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // non-traceable author statement /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -34.80 </td> <td> 469.50 </td> <td> -1.17 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 204281_at </td> <td> 204281_at </td> <td> NM_003213 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003213.1 /DEF=Homo sapiens TEA domain family member 4 (TEAD4), mRNA. /FEA=mRNA /GEN=TEAD4 /PROD=TEA domain family member 4 /DB_XREF=gi:4507426 /UG=Hs.94865 TEA domain family member 4 /FL=gb:U63824.1 gb:NM_003213.1 </td> <td> NM_003213 </td> <td> TEA domain family member 4 </td> <td> TEAD4 </td> <td> 7004 </td> <td> NM_003213 /// NM_201441 /// NM_201443 </td> <td> 0001501 // skeletal system development // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001825 // blastocyst formation // inferred from electronic annotation /// 0001830 // trophectodermal cell fate commitment // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007517 // muscle organ development // traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0035329 // hippo signaling // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 15.33 </td> <td> 127.01 </td> <td> 1.16 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 31837_at </td> <td> 31837_at </td> <td> U62317 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. U62317:Chromosome 22q13 BAC Clone CIT987SK-384D8 complete sequence /cds=(0,1739) /gb=U62317 /gi=1399959 /ug=Hs.150540 /len=2557 </td> <td> U62317 </td> <td> lipase maturation factor 2 </td> <td> LMF2 </td> <td> 91289 </td> <td> NM_033200 /// XM_005261955 /// XM_006724426 /// XM_006724427 </td> <td>  </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 24.15 </td> <td> 185.57 </td> <td> 1.16 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 221253_s_at </td> <td> 221253_s_at </td> <td> NM_030810 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030810.1 /DEF=Homo sapiens hypothetical protein MGC3178 (MGC3178), mRNA. /FEA=mRNA /GEN=MGC3178 /PROD=hypothetical protein MGC3178 /DB_XREF=gi:13540603 /FL=gb:NM_030810.1 </td> <td> NM_030810 </td> <td> BLOC1S5-TXNDC5 readthrough (NMD candidate) /// thioredoxin domain containing 5 (endoplasmic reticulum) </td> <td> BLOC1S5-TXNDC5 /// TXNDC5 </td> <td> 81567 /// 100526836 </td> <td> NM_001145549 /// NM_022085 /// NM_030810 /// NR_037616 </td> <td> 0006457 // protein folding // not recorded /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // not recorded /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043277 // apoptotic cell clearance // not recorded /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // not recorded /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031083 // BLOC-1 complex // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003756 // protein disulfide isomerase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation </td> <td> -291.60 </td> <td> 3765.85 </td> <td> -1.16 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202205_at </td> <td> 202205_at </td> <td> NM_003370 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003370.1 /DEF=Homo sapiens vasodilator-stimulated phosphoprotein (VASP), mRNA. /FEA=mRNA /GEN=VASP /PROD=vasodilator-stimulated phosphoprotein /DB_XREF=gi:4507868 /UG=Hs.93183 vasodilator-stimulated phosphoprotein /FL=gb:NM_003370.1 </td> <td> NM_003370 </td> <td> vasodilator-stimulated phosphoprotein </td> <td> VASP </td> <td> 7408 </td> <td> NM_001008736 /// NM_003370 /// XM_005259199 /// XM_005259200 </td> <td> 0001843 // neural tube closure // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008154 // actin polymerization or depolymerization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from direct assay /// 0034329 // cell junction assembly // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051289 // protein homotetramerization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005522 // profilin binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation </td> <td> -36.62 </td> <td> 163.14 </td> <td> -1.16 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202001_s_at </td> <td> 202001_s_at </td> <td> NM_002490 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002490.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (14kD, B14) (NDUFA6), mRNA.  /FEA=mRNA /GEN=NDUFA6 /PROD=NADH dehydrogenase (ubiquinone) 1 alphasubcomplex, 6 (14kD, B14) /DB_XREF=gi:4505358 /UG=Hs.274416 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (14kD, B14) /FL=gb:BC002772.1 gb:AF047182.1 gb:NM_002490.1 </td> <td> NM_002490 </td> <td> NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa </td> <td> NDUFA6 </td> <td> 4700 </td> <td> NM_002490 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006979 // response to oxidative stress // inferred from direct assay /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> 33.72 </td> <td> 349.06 </td> <td> 1.16 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 208833_s_at </td> <td> 208833_s_at </td> <td> AF119662 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF119662.1 /DEF=Homo sapiens E46 protein mRNA, complete cds. /FEA=mRNA /PROD=E46 protein /DB_XREF=gi:6563249 /UG=Hs.13493 like mouse brain protein E46 /FL=gb:AL050282.1 gb:AF119662.1 gb:NM_013236.1 </td> <td> AF119662 </td> <td> ataxin 10 </td> <td> ATXN10 </td> <td> 25814 </td> <td> NM_001167621 /// NM_013236 </td> <td> 0007399 // nervous system development // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> 114.47 </td> <td> 765.86 </td> <td> 1.16 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 217737_x_at </td> <td> 217737_x_at </td> <td> NM_016407 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016407.1 /DEF=Homo sapiens hypothetical protein (HSPC164), mRNA. /FEA=mRNA /GEN=HSPC164 /PROD=hypothetical protein /DB_XREF=gi:7705482 /UG=Hs.182281 hypothetical protein /FL=gb:BC003359.1 gb:AF212244.1 gb:AF117231.1 gb:AF161513.1 gb:AF161518.1 gb:NM_016407.1 </td> <td> NM_016407 </td> <td> replication termination factor 2 domain containing 1 </td> <td> RTFDC1 </td> <td> 51507 </td> <td> NM_001283035 /// NM_001283036 /// NM_001283037 /// NM_016407 </td> <td>  </td> <td>  </td> <td>  </td> <td> 24.10 </td> <td> 202.40 </td> <td> 1.16 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 217816_s_at </td> <td> 217816_s_at </td> <td> NM_020357 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020357.1 /DEF=Homo sapiens PEST-containing nuclear protein (pcnp), mRNA. /FEA=mRNA /GEN=pcnp /PROD=PEST-containing nuclear protein /DB_XREF=gi:9966826 /UG=Hs.283728 PEST-containing nuclear protein /FL=gb:AB037675.1 gb:NM_020357.1 </td> <td> NM_020357 </td> <td> PEST proteolytic signal containing nuclear protein </td> <td> PCNP </td> <td> 57092 </td> <td> NM_020357 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 63.75 </td> <td> 519.95 </td> <td> 1.16 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200997_at </td> <td> 200997_at </td> <td> NM_002896 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002896.1 /DEF=Homo sapiens RNA binding motif protein 4 (RBM4), mRNA. /FEA=mRNA /GEN=RBM4 /PROD=RNA binding motif protein 4 /DB_XREF=gi:4506444 /UG=Hs.6106 RNA binding motif protein 4 /FL=gb:BC000307.1 gb:U89505.1 gb:NM_002896.1 </td> <td> NM_002896 </td> <td> RBM14-RBM4 readthrough /// RNA binding motif protein 4 </td> <td> RBM14-RBM4 /// RBM4 </td> <td> 5936 /// 100526737 </td> <td> NM_001198843 /// NM_001198844 /// NM_001198845 /// NM_001198846 /// NM_002896 </td> <td> 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0002190 // cap-independent translational initiation // inferred from direct assay /// 0002192 // IRES-dependent translational initiation // inferred from direct assay /// 0006260 // DNA replication // non-traceable author statement /// 0006281 // DNA repair // non-traceable author statement /// 0006310 // DNA recombination // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // non-traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009725 // response to hormone // traceable author statement /// 0016575 // histone deacetylation // inferred from physical interaction /// 0017148 // negative regulation of translation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030520 // intracellular estrogen receptor signaling pathway // non-traceable author statement /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0032055 // negative regulation of translation in response to stress // inferred from direct assay /// 0035278 // negative regulation of translation involved in gene silencing by miRNA // inferred from direct assay /// 0042921 // glucocorticoid receptor signaling pathway // non-traceable author statement /// 0043153 // entrainment of circadian clock by photoperiod // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045947 // negative regulation of translational initiation // inferred from direct assay /// 0046685 // response to arsenic-containing substance // inferred from direct assay /// 0046822 // regulation of nucleocytoplasmic transport // inferred from direct assay /// 0051149 // positive regulation of muscle cell differentiation // inferred from direct assay /// 0051403 // stress-activated MAPK cascade // inferred from direct assay /// 0097167 // circadian regulation of translation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005667 // transcription factor complex // inferred from physical interaction /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0016592 // mediator complex // non-traceable author statement /// 0016607 // nuclear speck // inferred from direct assay /// 0030529 // ribonucleoprotein complex // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001104 // RNA polymerase II transcription cofactor activity // non-traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003729 // mRNA binding // inferred from direct assay /// 0003730 // mRNA 3'-UTR binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from physical interaction /// 0030674 // protein binding, bridging // non-traceable author statement /// 0035198 // miRNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0097157 // pre-mRNA intronic binding // inferred from direct assay /// 0097158 // pre-mRNA intronic pyrimidine-rich binding // inferred from direct assay </td> <td> 34.00 </td> <td> 219.60 </td> <td> 1.16 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 212794_s_at </td> <td> 212794_s_at </td> <td> AK001728 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001728.1 /DEF=Homo sapiens cDNA FLJ10866 fis, clone NT2RP4001614. /FEA=mRNA /DB_XREF=gi:7023169 /UG=Hs.12144 KIAA1033 protein </td> <td> AK001728 </td> <td> KIAA1033 </td> <td> KIAA1033 </td> <td> 23325 </td> <td> NM_001293640 /// NM_015275 /// XM_005268742 /// XM_005268743 /// XM_005268744 /// XM_005268745 /// XM_005268746 /// XR_245916 </td> <td> 0016197 // endosomal transport // inferred from mutant phenotype /// 0016197 // endosomal transport // inferred from sequence or structural similarity </td> <td> 0005768 // endosome // inferred from direct assay /// 0071203 // WASH complex // inferred from direct assay </td> <td>  </td> <td> 51.60 </td> <td> 259.98 </td> <td> 1.16 </td> <td> 0.28 </td> <td> 0.36 </td> <td> -4.59 </td> </tr>
  <tr> <td> 208994_s_at </td> <td> 208994_s_at </td> <td> AI638762 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI638762 /FEA=EST /DB_XREF=gi:4690996 /DB_XREF=est:tt32a04.x1 /CLONE=IMAGE:2242446 /UG=Hs.77965 peptidyl-prolyl isomerase G (cyclophilin G) /FL=gb:U40763.1 gb:NM_004792.1 </td> <td> AI638762 </td> <td> peptidylprolyl isomerase G (cyclophilin G) </td> <td> PPIG </td> <td> 9360 </td> <td> NM_004792 /// XM_005246966 /// XM_005246967 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016018 // cyclosporin A binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 19.45 </td> <td> 152.30 </td> <td> 1.15 </td> <td> 0.28 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202689_at </td> <td> 202689_at </td> <td> NM_013286 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013286.1 /DEF=Homo sapiens chromosome 3p21.1 gene sequence (HUMAGCGB), mRNA. /FEA=mRNA /GEN=HUMAGCGB /PROD=chromosome 3p21.1 gene sequence /DB_XREF=gi:7110644 /UG=Hs.84162 chromosome 3p21.1 gene sequence /FL=gb:BC001367.1 gb:L13434.1 gb:NM_013286.1 </td> <td> NM_013286 </td> <td> RNA binding motif protein 15B </td> <td> RBM15B </td> <td> 29890 </td> <td> NM_013286 </td> <td> 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -25.65 </td> <td> 214.50 </td> <td> -1.15 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 222182_s_at </td> <td> 222182_s_at </td> <td> BG105204 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG105204 /FEA=EST /DB_XREF=gi:12599050 /DB_XREF=est:602312951F1 /CLONE=IMAGE:4422541 /UG=Hs.239720 CCR4-NOT transcription complex, subunit 2 </td> <td> BG105204 </td> <td> CCR4-NOT transcription complex, subunit 2 </td> <td> CNOT2 </td> <td> 4848 </td> <td> NM_001199302 /// NM_001199303 /// NM_014515 /// NR_037615 /// XM_006719429 /// XM_006719430 /// XM_006719431 /// XM_006719432 /// XM_006719433 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0001829 // trophectodermal cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010606 // positive regulation of cytoplasmic mRNA processing body assembly // inferred from mutant phenotype /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from mutant phenotype /// 0090503 // RNA phosphodiester bond hydrolysis, exonucleolytic // inferred from mutant phenotype /// 2000036 // regulation of stem cell maintenance // inferred from mutant phenotype </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030014 // CCR4-NOT complex // inferred from direct assay </td> <td> 0001104 // RNA polymerase II transcription cofactor activity // traceable author statement /// 0001226 // RNA polymerase II transcription corepressor binding // inferred from direct assay /// 0004535 // poly(A)-specific ribonuclease activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction </td> <td> -26.08 </td> <td> 187.86 </td> <td> -1.15 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201073_s_at </td> <td> 201073_s_at </td> <td> AL040633 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL040633 /FEA=EST /DB_XREF=gi:5409580 /DB_XREF=est:DKFZp434M2414_s1 /CLONE=DKFZp434M2414 /UG=Hs.172280 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 /FL=gb:U66615.1 gb:NM_003074.1 </td> <td> AL040633 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 </td> <td> SMARCC1 </td> <td> 6599 </td> <td> NM_003074 </td> <td> 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0001741 // XY body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from sequence or structural similarity /// 0071778 // WINAC complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> 26.28 </td> <td> 150.61 </td> <td> 1.15 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 212112_s_at </td> <td> 212112_s_at </td> <td> AI816243 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI816243 /FEA=EST /DB_XREF=gi:5431789 /DB_XREF=est:au46a11.x1 /CLONE=IMAGE:2517788 /UG=Hs.106823 H.sapiens gene from PAC 426I6, similar to syntaxin 7 </td> <td> AI816243 </td> <td> syntaxin 12 </td> <td> STX12 </td> <td> 23673 </td> <td> NM_177424 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // not recorded /// 0015031 // protein transport // inferred from electronic annotation /// 0016079 // synaptic vesicle exocytosis // not recorded /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0033344 // cholesterol efflux // inferred from direct assay /// 0050821 // protein stabilization // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031083 // BLOC-1 complex // inferred from direct assay /// 0031201 // SNARE complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000149 // SNARE binding // not recorded /// 0005484 // SNAP receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction </td> <td> -67.20 </td> <td> 453.73 </td> <td> -1.15 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 221827_at </td> <td> 221827_at </td> <td> BE788439 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE788439 /FEA=EST /DB_XREF=gi:10209637 /DB_XREF=est:601475616F1 /CLONE=IMAGE:3878643 /UG=Hs.247280 HBV associated factor </td> <td> BE788439 </td> <td> RanBP-type and C3HC4-type zinc finger containing 1 </td> <td> RBCK1 </td> <td> 10616 </td> <td> NM_006462 /// NM_031227 /// NM_031228 /// NM_031229 /// XM_005260645 /// XM_005260646 /// XM_005260649 /// XR_430266 /// XR_430267 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0097039 // protein linear polyubiquitination // inferred from direct assay /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0071797 // LUBAC complex // inferred from direct assay </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -19.53 </td> <td> 222.39 </td> <td> -1.14 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 208699_x_at </td> <td> 208699_x_at </td> <td> BF696840 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF696840 /FEA=EST /DB_XREF=gi:11982248 /DB_XREF=est:602125377F1 /CLONE=IMAGE:4282458 /UG=Hs.89643 transketolase (Wernicke-Korsakoff syndrome) /FL=gb:U55017.1 gb:L12711.1 gb:NM_001064.1 </td> <td> BF696840 </td> <td> transketolase </td> <td> TKT </td> <td> 7086 </td> <td> NM_001064 /// NM_001135055 /// NM_001135056 /// NM_001258028 /// NR_047579 /// NR_047580 /// XM_006713319 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0005999 // xylulose biosynthetic process // traceable author statement /// 0006098 // pentose-phosphate shunt // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009052 // pentose-phosphate shunt, non-oxidative branch // non-traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046166 // glyceraldehyde-3-phosphate biosynthetic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005777 // peroxisome // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004802 // transketolase activity // not recorded /// 0004802 // transketolase activity // inferred from direct assay /// 0016624 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from direct assay </td> <td> -94.55 </td> <td> 698.52 </td> <td> -1.14 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 213214_x_at </td> <td> 213214_x_at </td> <td> AW190090 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW190090 /FEA=EST /DB_XREF=gi:6464570 /DB_XREF=est:xl59a03.x1 /CLONE=IMAGE:2678956 /UG=Hs.14376 actin, gamma 1 </td> <td> AW190090 </td> <td> actin, beta /// actin, gamma 1 </td> <td> ACTB /// ACTG1 </td> <td> 60 /// 71 </td> <td> NM_001101 /// NM_001199954 /// NM_001614 /// NR_037688 /// XM_006715764 /// XM_006722048 /// XM_006722049 </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0006325 // chromatin organization // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred by curator /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction </td> <td> -579.98 </td> <td> 5329.96 </td> <td> -1.14 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 52255_s_at </td> <td> 52255_s_at </td> <td> AI984221 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI984221:wz57c09.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2562160 /clone_end=3' /gb=AI984221 /gi=5811440 /ug=Hs.235368 /len=515 </td> <td> AI984221 </td> <td> collagen, type V, alpha 3 </td> <td> COL5A3 </td> <td> 50509 </td> <td> NM_015719 </td> <td> 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030199 // collagen fibril organization // non-traceable author statement /// 0030574 // collagen catabolic process // traceable author statement /// 0043588 // skin development // non-traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005588 // collagen type V trimer // non-traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005518 // collagen binding // non-traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0043394 // proteoglycan binding // inferred from electronic annotation </td> <td> -15.25 </td> <td> 29.77 </td> <td> -1.14 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200846_s_at </td> <td> 200846_s_at </td> <td> NM_002708 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002708.1 /DEF=Homo sapiens protein phosphatase 1, catalytic subunit, alpha isoform (PPP1CA), mRNA.  /FEA=mRNA /GEN=PPP1CA /PROD=protein phosphatase 1, catalytic subunit, alphaisoform /DB_XREF=gi:4506002 /UG=Hs.183994 protein phosphatase 1, catalytic subunit, alpha isoform /FL=gb:BC001888.1 gb:BC004482.1 gb:M63960.1 gb:NM_002708.1 </td> <td> NM_002708 </td> <td> protein phosphatase 1, catalytic subunit, alpha isozyme </td> <td> PPP1CA </td> <td> 5499 </td> <td> NM_001008709 /// NM_002708 /// NM_206873 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005979 // regulation of glycogen biosynthetic process // inferred from electronic annotation /// 0005981 // regulation of glycogen catabolic process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0042752 // regulation of circadian rhythm // inferred from mutant phenotype /// 0043153 // entrainment of circadian clock by photoperiod // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0046822 // regulation of nucleocytoplasmic transport // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0000164 // protein phosphatase type 1 complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0042587 // glycogen granule // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from sequence or structural similarity /// 0043021 // ribonucleoprotein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 24.80 </td> <td> 322.57 </td> <td> 1.14 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 203324_s_at </td> <td> 203324_s_at </td> <td> NM_001233 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001233.1 /DEF=Homo sapiens caveolin 2 (CAV2), mRNA. /FEA=mRNA /GEN=CAV2 /PROD=caveolin 2 /DB_XREF=gi:4557412 /UG=Hs.139851 caveolin 2 /FL=gb:BC005256.1 gb:AF035752.1 gb:NM_001233.1 </td> <td> NM_001233 </td> <td> caveolin 2 </td> <td> CAV2 </td> <td> 858 </td> <td> NM_001206747 /// NM_001206748 /// NM_001233 /// NM_198212 </td> <td> 0001937 // negative regulation of endothelial cell proliferation // inferred from sequence or structural similarity /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0006906 // vesicle fusion // inferred from direct assay /// 0007005 // mitochondrion organization // inferred from sequence or structural similarity /// 0007029 // endoplasmic reticulum organization // inferred from sequence or structural similarity /// 0007088 // regulation of mitosis // inferred from expression pattern /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016050 // vesicle organization // inferred from direct assay /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0048278 // vesicle docking // inferred from direct assay /// 0048741 // skeletal muscle fiber development // inferred from sequence or structural similarity /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0060161 // positive regulation of dopamine receptor signaling pathway // inferred from mutant phenotype /// 0070836 // caveola assembly // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0002080 // acrosomal membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005811 // lipid particle // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005901 // caveola // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030133 // transport vesicle // inferred from direct assay /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000149 // SNARE binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019905 // syntaxin binding // inferred from electronic annotation /// 0031748 // D1 dopamine receptor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0051219 // phosphoprotein binding // inferred from electronic annotation </td> <td> 65.83 </td> <td> 557.01 </td> <td> 1.14 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 48612_at </td> <td> 48612_at </td> <td> AA225490 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AA225490:nc25b01.r1 Homo sapiens cDNA /clone=IMAGE-1009129 /gb=AA225490 /gi=1846817 /ug=Hs.80115 /len=539 </td> <td> AA225490 </td> <td> NEDD4 binding protein 1 </td> <td> N4BP1 </td> <td> 9683 </td> <td> NM_153029 /// XM_005256262 /// XM_006721351 </td> <td> 0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0034644 // cellular response to UV // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0016605 // PML body // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -51.70 </td> <td> 293.25 </td> <td> -1.14 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 219061_s_at </td> <td> 219061_s_at </td> <td> NM_006014 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006014.1 /DEF=Homo sapiens DNA segment on chromosome X (unique) 9879 expressed sequence (DXS9879E), mRNA.  /FEA=mRNA /GEN=DXS9879E /PROD=ITBA2 protein /DB_XREF=gi:5174432 /UG=Hs.18212 DNA segment on chromosome X (unique) 9879 expressed sequence /FL=gb:NM_006014.1 </td> <td> NM_006014 </td> <td> L antigen family, member 3 </td> <td> LAGE3 </td> <td> 8270 </td> <td> NM_006014 </td> <td> 0008033 // tRNA processing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td>  </td> <td> 15.05 </td> <td> 67.40 </td> <td> 1.14 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201698_s_at </td> <td> 201698_s_at </td> <td> NM_003769 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003769.1 /DEF=Homo sapiens splicing factor, arginineserine-rich 9 (SFRS9), mRNA. /FEA=mRNA /GEN=SFRS9 /PROD=splicing factor, arginineserine-rich 9 /DB_XREF=gi:4506902 /UG=Hs.77608 splicing factor, arginineserine-rich 9 /FL=gb:U30825.1 gb:NM_003769.1 </td> <td> NM_003769 </td> <td> glutamyl-tRNA(Gln) amidotransferase, subunit C /// serine/arginine-rich splicing factor 9 </td> <td> GATC /// SRSF9 </td> <td> 8683 /// 283459 </td> <td> NM_003769 /// NM_176818 /// NR_033684 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006450 // regulation of translational fidelity // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0032543 // mitochondrial translation // inferred from mutant phenotype /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0070681 // glutaminyl-tRNAGln biosynthesis via transamidation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0030956 // glutamyl-tRNA(Gln) amidotransferase complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016884 // carbon-nitrogen ligase activity, with glutamine as amido-N-donor // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050567 // glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity // inferred from direct assay </td> <td> 39.25 </td> <td> 682.52 </td> <td> 1.14 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 209214_s_at </td> <td> 209214_s_at </td> <td> BC004817 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004817.1 /DEF=Homo sapiens, Ewing sarcoma breakpoint region 1, clone MGC:5432, mRNA, complete cds.  /FEA=mRNA /PROD=Ewing sarcoma breakpoint region 1 /DB_XREF=gi:13435962 /UG=Hs.129953 Ewing sarcoma breakpoint region 1 /FL=gb:BC004817.1 gb:NM_005243.1 </td> <td> BC004817 </td> <td> EWS RNA-binding protein 1 </td> <td> EWSR1 </td> <td> 2130 </td> <td> NM_001163285 /// NM_001163286 /// NM_001163287 /// NM_005243 /// NM_013986 /// XM_005261389 /// XM_005261390 /// XM_006724166 /// XM_006724167 /// XR_430403 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 28.92 </td> <td> 419.09 </td> <td> 1.14 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 217986_s_at </td> <td> 217986_s_at </td> <td> NM_013448 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013448.1 /DEF=Homo sapiens bromodomain adjacent to zinc finger domain, 1A (BAZ1A), mRNA.  /FEA=mRNA /GEN=BAZ1A /PROD=bromodomain adjacent to zinc finger domain, 1A /DB_XREF=gi:7304918 /UG=Hs.8858 bromodomain adjacent to zinc finger domain, 1A /FL=gb:AB032252.1 gb:NM_013448.1 </td> <td> NM_013448 </td> <td> bromodomain adjacent to zinc finger domain, 1A </td> <td> BAZ1A </td> <td> 11177 </td> <td> NM_013448 /// NM_182648 </td> <td> 0006261 // DNA-dependent DNA replication // inferred from direct assay /// 0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-templated // non-traceable author statement /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0000228 // nuclear chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0008623 // CHRAC // inferred from direct assay /// 0016590 // ACF complex // traceable author statement </td> <td> 0004402 // histone acetyltransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 26.55 </td> <td> 259.12 </td> <td> 1.14 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 208720_s_at </td> <td> 208720_s_at </td> <td> AI890947 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI890947 /FEA=EST /DB_XREF=gi:5596111 /DB_XREF=est:wm93d01.x1 /CLONE=IMAGE:2443489 /UG=Hs.145696 splicing factor (CC1.3) /FL=gb:L10911.1 </td> <td> AI890947 </td> <td> RNA binding motif protein 39 </td> <td> RBM39 </td> <td> 9584 </td> <td> NM_001242599 /// NM_001242600 /// NM_004902 /// NM_184234 /// NM_184237 /// NM_184241 /// NM_184244 /// NR_040722 /// NR_040723 /// NR_040724 /// XM_006723890 /// XM_006723891 /// XM_006723892 /// XM_006723893 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -44.98 </td> <td> 393.34 </td> <td> -1.13 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202854_at </td> <td> 202854_at </td> <td> NM_000194 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000194.1 /DEF=Homo sapiens hypoxanthine phosphoribosyltransferase 1 (Lesch-Nyhan syndrome) (HPRT1), mRNA.  /FEA=mRNA /GEN=HPRT1 /PROD=hypoxanthine phosphoribosyltransferase 1 /DB_XREF=gi:4504482 /UG=Hs.82314 hypoxanthine phosphoribosyltransferase 1 (Lesch-Nyhan syndrome) /FL=gb:BC000578.1 gb:M31642.1 gb:NM_000194.1 </td> <td> NM_000194 </td> <td> hypoxanthine phosphoribosyltransferase 1 </td> <td> HPRT1 </td> <td> 3251 </td> <td> NM_000194 </td> <td> 0001975 // response to amphetamine // inferred from electronic annotation /// 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from mutant phenotype /// 0006166 // purine ribonucleoside salvage // inferred from mutant phenotype /// 0006168 // adenine salvage // not recorded /// 0006178 // guanine salvage // inferred from direct assay /// 0007610 // behavior // inferred from mutant phenotype /// 0007625 // grooming behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0019835 // cytolysis // inferred from electronic annotation /// 0021756 // striatum development // inferred from electronic annotation /// 0021895 // cerebral cortex neuron differentiation // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0032263 // GMP salvage // not recorded /// 0032264 // IMP salvage // not recorded /// 0032264 // IMP salvage // inferred from electronic annotation /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0043101 // purine-containing compound salvage // traceable author statement /// 0043103 // hypoxanthine salvage // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045964 // positive regulation of dopamine metabolic process // inferred from mutant phenotype /// 0046038 // GMP catabolic process // inferred from direct assay /// 0046040 // IMP metabolic process // inferred from direct assay /// 0046083 // adenine metabolic process // inferred from electronic annotation /// 0046100 // hypoxanthine metabolic process // inferred from mutant phenotype /// 0046651 // lymphocyte proliferation // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from direct assay /// 0051289 // protein homotetramerization // inferred from physical interaction /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004422 // hypoxanthine phosphoribosyltransferase activity // not recorded /// 0004422 // hypoxanthine phosphoribosyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052657 // guanine phosphoribosyltransferase activity // inferred from direct assay </td> <td> 25.02 </td> <td> 375.99 </td> <td> 1.13 </td> <td> 0.29 </td> <td> 0.37 </td> <td> -4.59 </td> </tr>
  <tr> <td> 203462_x_at </td> <td> 203462_x_at </td> <td> NM_003751 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003751.1 /DEF=Homo sapiens eukaryotic translation initiation factor 3, subunit 9 (eta, 116kD) (EIF3S9), mRNA.  /FEA=mRNA /GEN=EIF3S9 /PROD=eukaryotic translation initiation factor 3,subunit 9 (eta, 116kD) /DB_XREF=gi:4503526 /UG=Hs.57783 eukaryotic translation initiation factor 3, subunit 9 (eta, 116kD) /FL=gb:U62583.1 gb:NM_003751.1 </td> <td> NM_003751 </td> <td> eukaryotic translation initiation factor 3, subunit B </td> <td> EIF3B </td> <td> 8662 </td> <td> NM_001037283 /// NM_003751 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0031369 // translation initiation factor binding // inferred from electronic annotation /// 0032947 // protein complex scaffold // traceable author statement </td> <td> -59.05 </td> <td> 701.98 </td> <td> -1.13 </td> <td> 0.29 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202252_at </td> <td> 202252_at </td> <td> NM_002870 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002870.1 /DEF=Homo sapiens RAB13, member RAS oncogene family (RAB13), mRNA. /FEA=mRNA /GEN=RAB13 /PROD=RAB13, member RAS oncogene family /DB_XREF=gi:4506362 /UG=Hs.151536 RAB13, member RAS oncogene family /FL=gb:BC000799.1 gb:NM_002870.1 </td> <td> NM_002870 </td> <td> RAB13, member RAS oncogene family </td> <td> RAB13 </td> <td> 5872 </td> <td> NM_001272038 /// NM_002870 /// NR_073553 </td> <td> 0006184 // GTP catabolic process // not recorded /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0010737 // protein kinase A signaling // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0030866 // cortical actin cytoskeleton organization // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0032456 // endocytic recycling // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035767 // endothelial cell chemotaxis // inferred from sequence or structural similarity /// 0044795 // trans-Golgi network to recycling endosome transport // inferred from sequence or structural similarity /// 0061024 // membrane organization // traceable author statement /// 0070830 // tight junction assembly // inferred from mutant phenotype /// 0072659 // protein localization to plasma membrane // inferred from electronic annotation /// 0090002 // establishment of protein localization to plasma membrane // inferred from mutant phenotype /// 0097368 // establishment of Sertoli cell barrier // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0032593 // insulin-responsive compartment // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0034236 // protein kinase A catalytic subunit binding // inferred from electronic annotation </td> <td> -51.20 </td> <td> 450.93 </td> <td> -1.13 </td> <td> 0.29 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200019_s_at </td> <td> 200019_s_at </td> <td> NM_001997 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001997.1 /DEF=Homo sapiens Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30 (FAU), mRNA.  /FEA=mRNA /GEN=FAU /PROD=Finkel-Biskis-Reilly murine sarcoma virus(FBR-MuSV) ubiquitously expressed (fox derived); ribosomalprotein S30 /DB_XREF=gi:4503658 /UG=Hs.177415 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30 /FL=gb:NM_001997.1 </td> <td> NM_001997 </td> <td> Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed </td> <td> FAU </td> <td> 2197 </td> <td> NM_001997 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0002227 // innate immune response in mucosa // inferred from direct assay /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0019731 // antibacterial humoral response // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050830 // defense response to Gram-positive bacterium // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -82.95 </td> <td> 1595.28 </td> <td> -1.13 </td> <td> 0.29 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202579_x_at </td> <td> 202579_x_at </td> <td> NM_006353 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006353.1 /DEF=Homo sapiens high-mobility group (nonhistone chromosomal) protein 17-like 3 (HMG17L3), mRNA.  /FEA=mRNA /GEN=HMG17L3 /PROD=high-mobility group (nonhistone chromosomal)protein 17-like 3 /DB_XREF=gi:10835239 /UG=Hs.236774 high-mobility group (nonhistone chromosomal) protein 17-like 3 /FL=gb:NM_006353.1 gb:U90549.1 </td> <td> NM_006353 </td> <td> high mobility group nucleosomal binding domain 4 </td> <td> HMGN4 </td> <td> 10473 </td> <td> NM_006353 </td> <td>  </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from electronic annotation </td> <td> 22.27 </td> <td> 398.21 </td> <td> 1.13 </td> <td> 0.29 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211783_s_at </td> <td> 211783_s_at </td> <td> BC006177 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006177.1 /DEF=Homo sapiens, Similar to metastasis associated 1, clone MGC:13258, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to metastasis associated 1 /DB_XREF=gi:13544097 /FL=gb:BC006177.1 </td> <td> BC006177 </td> <td> metastasis associated 1 </td> <td> MTA1 </td> <td> 9112 </td> <td> NM_001203258 /// NM_004689 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0033363 // secretory granule organization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016581 // NuRD complex // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 29.73 </td> <td> 239.36 </td> <td> 1.13 </td> <td> 0.29 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211285_s_at </td> <td> 211285_s_at </td> <td> U84404 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U84404.1 /DEF=Human E6-associated protein E6-APubiquitin-protein ligase (UBE3A) mRNA, alternatively spliced, complete cds.  /FEA=mRNA /GEN=UBE3A /PROD=E6-associated protein E6-APubiquitin-proteinligase /DB_XREF=gi:1872513 /UG=Hs.180686 ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome) /FL=gb:AF273050.1 gb:U84404.1 </td> <td> U84404 </td> <td> ubiquitin protein ligase E3A </td> <td> UBE3A </td> <td> 7337 </td> <td> NM_000462 /// NM_130838 /// NM_130839 /// XM_005268267 /// XM_005268268 /// XM_005268269 /// XM_005268270 /// XM_005268271 /// XM_006720673 /// XM_006720674 /// XM_006720675 /// XM_006720676 </td> <td> 0001541 // ovarian follicle development // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007420 // brain development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // not recorded /// 0035037 // sperm entry // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0060736 // prostate gland growth // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded /// 0005829 // cytosol // inferred from electronic annotation </td> <td> 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> 20.27 </td> <td> 127.26 </td> <td> 1.13 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 213850_s_at </td> <td> 213850_s_at </td> <td> AI984932 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI984932 /FEA=EST /DB_XREF=gi:5812209 /DB_XREF=est:wr86e12.x1 /CLONE=IMAGE:2494606 /UG=Hs.51957 splicing factor, arginineserine-rich 2, interacting protein </td> <td> AI984932 </td> <td> SR-related CTD-associated factor 11 </td> <td> SCAF11 </td> <td> 9169 </td> <td> NM_004719 /// XM_005269230 /// XM_006719692 </td> <td> 0000245 // spliceosomal complex assembly // inferred from direct assay /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 21.23 </td> <td> 163.56 </td> <td> 1.13 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211996_s_at </td> <td> 211996_s_at </td> <td> BG256504 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG256504 /FEA=EST /DB_XREF=gi:12766320 /DB_XREF=est:602370041F1 /CLONE=IMAGE:4478098 /UG=Hs.110613 KIAA0220 protein </td> <td> BG256504 </td> <td> nuclear pore complex-interacting protein family member B4-like /// nuclear pore complex-interacting protein family member B4-like /// nuclear pore complex interacting protein pseudogene /// nuclear pore complex interacting protein family, member A5 /// nuclear pore complex interacting protein family, member B11 /// nuclear pore complex interacting protein family, member B3 /// nuclear pore complex interacting protein family, member B4 /// nuclear pore complex interacting protein family, member B5 </td> <td> LOC101060275 /// LOC101929910 /// LOC613037 /// NPIPA5 /// NPIPB11 /// NPIPB3 /// NPIPB4 /// NPIPB5 </td> <td> 23117 /// 440345 /// 613037 /// 728888 /// 100132247 /// 100288332 /// 101060275 /// 101929910 </td> <td> NM_001135865 /// NM_001277325 /// NM_130464 /// NR_002555 /// XM_005255019 /// XM_005255020 /// XM_005255021 /// XM_005255024 /// XM_005276516 /// XM_006720823 /// XM_006720824 /// XM_006720825 /// XM_006720826 /// XM_006720827 /// XM_006720828 /// XM_006721108 /// XM_006721110 /// XM_006725185 /// XM_006725186 /// XM_006725187 /// XM_006725188 /// XM_006725189 /// XM_006726610 /// XM_006726615 /// XM_006726626 /// XM_006726627 /// XM_006726628 /// XR_433240 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -40.60 </td> <td> 139.03 </td> <td> -1.12 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 209397_at </td> <td> 209397_at </td> <td> BC000147 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000147.1 /DEF=Homo sapiens, Similar to malic enzyme 2, NAD(+)-dependent, mitochondrial, clone MGC:5187, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to malic enzyme 2, NAD(+)-dependent,mitochondrial /DB_XREF=gi:12652790 /UG=Hs.75342 malic enzyme 2, NAD(+)-dependent, mitochondrial /FL=gb:BC000147.1 </td> <td> BC000147 </td> <td> malic enzyme 2, NAD(+)-dependent, mitochondrial </td> <td> ME2 </td> <td> 4200 </td> <td> NM_001168335 /// NM_002396 </td> <td> 0006108 // malate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004470 // malic enzyme activity // inferred from electronic annotation /// 0004471 // malate dehydrogenase (decarboxylating) (NAD+) activity // inferred from electronic annotation /// 0008948 // oxaloacetate decarboxylase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> -21.20 </td> <td> 265.88 </td> <td> -1.12 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200794_x_at </td> <td> 200794_x_at </td> <td> NM_014764 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014764.1 /DEF=Homo sapiens DAZ associated protein 2 (DAZAP2), mRNA. /FEA=mRNA /GEN=DAZAP2 /PROD=DAZ associated protein 2 /DB_XREF=gi:7661885 /UG=Hs.75416 DAZ associated protein 2 /FL=gb:BC002334.1 gb:D31767.1 gb:NM_014764.1 </td> <td> NM_014764 </td> <td> DAZ associated protein 2 </td> <td> DAZAP2 </td> <td> 9802 </td> <td> NM_001136264 /// NM_001136266 /// NM_001136267 /// NM_001136268 /// NM_001136269 /// NM_014764 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0050699 // WW domain binding // inferred from physical interaction </td> <td> 75.92 </td> <td> 794.94 </td> <td> 1.12 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211862_x_at </td> <td> 211862_x_at </td> <td> AF015451 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF015451.1 /DEF=Homo sapiens Usurpin-beta mRNA, complete cds. /FEA=CDS /PROD=Usurpin-beta /DB_XREF=gi:3133282 /UG=Hs.195175 CASP8 and FADD-like apoptosis regulator /FL=gb:AF015451.1 </td> <td> AF015451 </td> <td> CASP8 and FADD-like apoptosis regulator </td> <td> CFLAR </td> <td> 8837 </td> <td> NM_001127183 /// NM_001127184 /// NM_001202515 /// NM_001202516 /// NM_001202517 /// NM_001202518 /// NM_001202519 /// NM_003879 /// XM_005246935 /// XM_005246936 /// XM_005246937 /// XM_005246938 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from sequence or structural similarity /// 0014732 // skeletal muscle atrophy // inferred from sequence or structural similarity /// 0014842 // regulation of satellite cell proliferation // inferred from sequence or structural similarity /// 0014866 // skeletal myofibril assembly // inferred from sequence or structural similarity /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043403 // skeletal muscle tissue regeneration // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0060544 // regulation of necroptotic process // inferred from direct assay /// 0097190 // apoptotic signaling pathway // traceable author statement /// 1901740 // negative regulation of myoblast fusion // inferred from sequence or structural similarity /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0031264 // death-inducing signaling complex // inferred from direct assay /// 0031265 // CD95 death-inducing signaling complex // inferred from electronic annotation /// 0097342 // ripoptosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0004197 // cysteine-type endopeptidase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // inferred from direct assay /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0035877 // death effector domain binding // not recorded </td> <td> 40.57 </td> <td> 240.06 </td> <td> 1.12 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200093_s_at </td> <td> 200093_s_at </td> <td> N32864 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N32864 /FEA=EST /DB_XREF=gi:1153263 /DB_XREF=est:yw88d08.s1 /CLONE=IMAGE:259311 /UG=Hs.256697 histidine triad nucleotide-binding protein </td> <td> N32864 </td> <td> histidine triad nucleotide binding protein 1 </td> <td> HINT1 </td> <td> 3094 </td> <td> NM_005340 /// NR_024610 /// NR_024611 /// NR_073488 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009154 // purine ribonucleotide catabolic process // inferred from direct assay /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from mutant phenotype </td> <td> 0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // traceable author statement /// 0016787 // hydrolase activity // inferred from direct assay </td> <td> 35.45 </td> <td> 684.15 </td> <td> 1.12 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 217809_at </td> <td> 217809_at </td> <td> NM_014038 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014038.1 /DEF=Homo sapiens HSPC028 protein (HSPC028), mRNA. /FEA=mRNA /GEN=HSPC028 /PROD=HSPC028 protein /DB_XREF=gi:7661743 /UG=Hs.5216 HSPC028 protein /FL=gb:AF110323.1 gb:BC003056.1 gb:AF083246.1 gb:NM_014038.1 </td> <td> NM_014038 </td> <td> basic leucine zipper and W2 domains 2 </td> <td> BZW2 </td> <td> 28969 </td> <td> NM_001159767 /// NM_014038 /// NR_027624 /// XM_006715706 /// XM_006715707 /// XM_006715708 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -94.67 </td> <td> 732.96 </td> <td> -1.12 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200801_x_at </td> <td> 200801_x_at </td> <td> NM_001101 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001101.2 /DEF=Homo sapiens actin, beta (ACTB), mRNA. /FEA=mRNA /GEN=ACTB /PROD=beta actin /DB_XREF=gi:5016088 /UG=Hs.288061 actin, beta /FL=gb:BC001301.1 gb:BC002409.1 gb:BC004251.1 gb:NM_001101.2 </td> <td> NM_001101 </td> <td> actin, beta </td> <td> ACTB </td> <td> 60 </td> <td> NM_001101 /// XM_006715764 </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0006325 // chromatin organization // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction </td> <td> -569.28 </td> <td> 5412.44 </td> <td> -1.12 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202918_s_at </td> <td> 202918_s_at </td> <td> AF151853 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF151853.1 /DEF=Homo sapiens CGI-95 protein mRNA, complete cds. /FEA=mRNA /PROD=CGI-95 protein /DB_XREF=gi:4929658 /UG=Hs.107942 DKFZP564M112 protein /FL=gb:AB015441.1 gb:BC005237.1 gb:AF151853.1 gb:AL080070.1 gb:NM_015387.1 </td> <td> AF151853 </td> <td> HSPE1-MOB4 readthrough /// MOB family member 4, phocein </td> <td> HSPE1-MOB4 /// MOB4 </td> <td> 25843 /// 100529241 </td> <td> NM_001100819 /// NM_001202485 /// NM_001204094 /// NM_015387 /// NM_199482 </td> <td> 0006457 // protein folding // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 24.50 </td> <td> 208.60 </td> <td> 1.12 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211609_x_at </td> <td> 211609_x_at </td> <td> U51007 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U51007.1 /DEF=Human 26S protease subunit S5a mRNA, complete cds. /FEA=mRNA /PROD=26S protease subunit S5a /DB_XREF=gi:1256400 /FL=gb:U51007.1 </td> <td> U51007 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 </td> <td> PSMD4 </td> <td> 5710 </td> <td> NM_002810 /// NM_153822 /// XM_005245354 /// XM_006711464 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008540 // proteasome regulatory particle, base subcomplex // inferred from electronic annotation /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -46.43 </td> <td> 334.01 </td> <td> -1.12 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200620_at </td> <td> 200620_at </td> <td> NM_004872 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004872.1 /DEF=Homo sapiens chromosome 1 open reading frame 8 (C1ORF8), mRNA. /FEA=mRNA /GEN=C1ORF8 /PROD=chromosome 1 open reading frame 8 /DB_XREF=gi:4758571 /UG=Hs.11441 chromosome 1 open reading frame 8 /FL=gb:BC003106.1 gb:AF290615.1 gb:AF047439.1 gb:NM_004872.1 </td> <td> NM_004872 </td> <td> transmembrane protein 59 </td> <td> TMEM59 </td> <td> 9528 </td> <td> NM_004872 /// XM_005271350 /// XM_005271351 /// XM_006711051 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0010508 // positive regulation of autophagy // inferred from mutant phenotype /// 0010955 // negative regulation of protein processing // inferred from direct assay /// 0090005 // negative regulation of establishment of protein localization to plasma membrane // inferred from direct assay /// 0090285 // negative regulation of protein glycosylation in Golgi // inferred from direct assay </td> <td> 0000137 // Golgi cis cisterna // inferred from direct assay /// 0000138 // Golgi trans cisterna // inferred from direct assay /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005797 // Golgi medial cisterna // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 42.63 </td> <td> 463.24 </td> <td> 1.11 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 212371_at </td> <td> 212371_at </td> <td> AL049397 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049397.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586C1019 (from clone DKFZp586C1019). /FEA=mRNA /DB_XREF=gi:4500188 /UG=Hs.12314 Homo sapiens mRNA; cDNA DKFZp586C1019 (from clone DKFZp586C1019) </td> <td> AL049397 </td> <td> desumoylating isopeptidase 2 </td> <td> DESI2 </td> <td> 51029 </td> <td> NM_016076 /// XM_005273154 </td> <td> 0006508 // proteolysis // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -28.03 </td> <td> 441.86 </td> <td> -1.11 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 218450_at </td> <td> 218450_at </td> <td> NM_015987 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015987.1 /DEF=Homo sapiens heme-binding protein (HEBP), mRNA. /FEA=mRNA /GEN=HEBP /PROD=heme-binding protein /DB_XREF=gi:7705404 /UG=Hs.108675 heme-binding protein /FL=gb:AF117615.1 gb:NM_015987.1 gb:AF167473.1 </td> <td> NM_015987 </td> <td> heme binding protein 1 </td> <td> HEBP1 </td> <td> 50865 </td> <td> NM_015987 </td> <td> 0007623 // circadian rhythm // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0020037 // heme binding // inferred from sequence or structural similarity </td> <td> 20.38 </td> <td> 144.24 </td> <td> 1.11 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 212250_at </td> <td> 212250_at </td> <td> AV700332 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV700332 /FEA=EST /DB_XREF=gi:10302303 /DB_XREF=est:AV700332 /CLONE=GKCDIF11 /UG=Hs.243901 Homo sapiens cDNA FLJ20738 fis, clone HEP08257 </td> <td> AV700332 </td> <td> metadherin </td> <td> MTDH </td> <td> 92140 </td> <td> NM_178812 /// XM_005251098 /// XM_005251099 /// XM_005251100 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0010508 // positive regulation of autophagy // inferred from direct assay /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling // inferred from direct assay /// 0070830 // tight junction assembly // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0016604 // nuclear body // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0046581 // intercellular canaliculus // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051059 // NF-kappaB binding // inferred from physical interaction </td> <td> 54.82 </td> <td> 360.79 </td> <td> 1.11 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 212464_s_at </td> <td> 212464_s_at </td> <td> X02761 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X02761.1 /DEF=Human mRNA for fibronectin (FN precursor). /FEA=mRNA /PROD=fibronectin precursor /DB_XREF=gi:31396 /UG=Hs.287820 fibronectin 1 </td> <td> X02761 </td> <td> fibronectin 1 </td> <td> FN1 </td> <td> 2335 </td> <td> NM_002026 /// NM_054034 /// NM_212474 /// NM_212475 /// NM_212476 /// NM_212478 /// NM_212482 /// XM_005246397 /// XM_005246398 /// XM_005246399 /// XM_005246400 /// XM_005246401 /// XM_005246402 /// XM_005246403 /// XM_005246404 /// XM_005246405 /// XM_005246406 /// XM_005246407 /// XM_005246408 /// XM_005246409 /// XM_005246410 /// XM_005246411 /// XM_005246412 /// XM_005246413 /// XM_005246414 /// XM_005246415 /// XM_005246416 /// XM_005246417 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006953 // acute-phase response // inferred from electronic annotation /// 0007044 // cell-substrate junction assembly // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007161 // calcium-independent cell-matrix adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009611 // response to wounding // non-traceable author statement /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0018149 // peptide cross-linking // inferred from direct assay /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005577 // fibrinogen complex // inferred from direct assay /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0005178 // integrin binding // inferred from direct assay /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0008201 // heparin binding // non-traceable author statement /// 0016504 // peptidase activator activity // inferred from electronic annotation </td> <td> -274.48 </td> <td> 3079.56 </td> <td> -1.11 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201666_at </td> <td> 201666_at </td> <td> NM_003254 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003254.1 /DEF=Homo sapiens tissue inhibitor of metalloproteinase 1 (erythroid potentiating activity, collagenase inhibitor) (TIMP1), mRNA.  /FEA=mRNA /GEN=TIMP1 /PROD=tissue inhibitor of metalloproteinase 1precursor /DB_XREF=gi:4507508 /UG=Hs.5831 tissue inhibitor of metalloproteinase 1 (erythroid potentiating activity, collagenase inhibitor) /FL=gb:BC000866.1 gb:M12670.1 gb:M59906.1 gb:NM_003254.1 </td> <td> NM_003254 </td> <td> TIMP metallopeptidase inhibitor 1 </td> <td> TIMP1 </td> <td> 7076 </td> <td> NM_003254 /// XM_005272645 </td> <td> 0001775 // cell activation // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0034097 // response to cytokine // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043249 // erythrocyte maturation // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0048553 // negative regulation of metalloenzyme activity // inferred from direct assay /// 0051045 // negative regulation of membrane protein ectodomain proteolysis // inferred from direct assay /// 1901164 // negative regulation of trophoblast cell migration // inferred from mutant phenotype /// 2001044 // regulation of integrin-mediated signaling pathway // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008191 // metalloendopeptidase inhibitor activity // inferred from direct assay /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 31.92 </td> <td> 419.89 </td> <td> 1.11 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 209455_at </td> <td> 209455_at </td> <td> BE963245 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE963245 /FEA=EST /DB_XREF=gi:11766663 /DB_XREF=est:601656874R1 /CLONE=IMAGE:3865699 /UG=Hs.21229 f-box and WD-40 domain protein 1B /FL=gb:AF176022.1 gb:AB033281.1 </td> <td> BE963245 </td> <td> F-box and WD repeat domain containing 11 </td> <td> FBXW11 </td> <td> 23291 </td> <td> NM_012300 /// NM_033644 /// NM_033645 /// XM_005265855 /// XM_005265856 /// XM_005265857 /// XM_005265858 /// XM_005265859 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // non-traceable author statement /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031648 // protein destabilization // inferred from mutant phenotype /// 0042347 // negative regulation of NF-kappaB import into nucleus // inferred from electronic annotation /// 0042753 // positive regulation of circadian rhythm // inferred from sequence or structural similarity /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0045862 // positive regulation of proteolysis // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0048511 // rhythmic process // inferred from electronic annotation </td> <td> 0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -19.60 </td> <td> 151.03 </td> <td> -1.11 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201322_at </td> <td> 201322_at </td> <td> NM_001686 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001686.1 /DEF=Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide (ATP5B), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=ATP5B /PROD=ATP synthase, H+ transporting, mitochondrial F1complex, beta polypeptide /DB_XREF=gi:4502294 /UG=Hs.25 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide /FL=gb:D00022.1 gb:NM_001686.1 </td> <td> NM_001686 </td> <td> ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide </td> <td> ATP5B </td> <td> 506 </td> <td> NM_001686 </td> <td> 0001525 // angiogenesis // inferred from mutant phenotype /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006091 // generation of precursor metabolites and energy // non-traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006933 // negative regulation of cell adhesion involved in substrate-bound cell migration // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from mutant phenotype /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0051453 // regulation of intracellular pH // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005754 // mitochondrial proton-transporting ATP synthase, catalytic core // non-traceable author statement /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred by curator /// 0042288 // MHC class I protein binding // inferred from direct assay /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from mutant phenotype </td> <td> -130.22 </td> <td> 1575.31 </td> <td> -1.11 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 33778_at </td> <td> 33778_at </td> <td> AL096779 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AL096779:Novel human gene mapping to chomosome 2213.3  similar to yeast ORF YOR070C, putative GTPase Activator (start missing) /cds=(51,917) /gb=AL096779 /gi=5420221 /ug=Hs.20017 /len=1416 </td> <td> AL096779 </td> <td> TBC1 domain family, member 22A </td> <td> TBC1D22A </td> <td> 25771 </td> <td> NM_001284303 /// NM_001284304 /// NM_001284305 /// NM_014346 /// NR_104292 /// XM_005261496 /// XM_006724223 /// XR_244364 </td> <td> 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td>  </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> -21.68 </td> <td> 194.31 </td> <td> -1.11 </td> <td> 0.30 </td> <td> 0.38 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202004_x_at </td> <td> 202004_x_at </td> <td> NM_003001 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003001.2 /DEF=Homo sapiens succinate dehydrogenase complex, subunit C, integral membrane protein, 15kD (SDHC), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=SDHC /PROD=succinate dehydrogenase complex, subunit Cprecursor /DB_XREF=gi:9257243 /UG=Hs.3577 succinate dehydrogenase complex, subunit C, integral membrane protein, 15kD /FL=gb:U57877.1 gb:NM_003001.2 </td> <td> NM_003001 </td> <td> succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa </td> <td> SDHC </td> <td> 6391 </td> <td> NM_001035511 /// NM_001035512 /// NM_001035513 /// NM_001278172 /// NM_003001 /// NR_103459 </td> <td> 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0009060 // aerobic respiration // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement </td> <td> 0005739 // mitochondrion // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005749 // mitochondrial respiratory chain complex II // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0045273 // respiratory chain complex II // traceable author statement /// 0045281 // succinate dehydrogenase complex // inferred from electronic annotation </td> <td> 0000104 // succinate dehydrogenase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 27.42 </td> <td> 354.84 </td> <td> 1.11 </td> <td> 0.30 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 220477_s_at </td> <td> 220477_s_at </td> <td> NM_014145 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014145.1 /DEF=Homo sapiens HSPC274 protein (HSPC274), mRNA. /FEA=mRNA /GEN=HSPC274 /PROD=HSPC274 protein /DB_XREF=gi:7661833 /UG=Hs.323476 HSPC274 protein /FL=gb:AF161392.1 gb:NM_014145.1 </td> <td> NM_014145 </td> <td> transmembrane protein 230 </td> <td> TMEM230 </td> <td> 29058 </td> <td> NM_001009923 /// NM_001009924 /// NM_001009925 /// NM_014145 /// XM_005260713 /// XM_006723561 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 33.92 </td> <td> 305.39 </td> <td> 1.11 </td> <td> 0.30 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200787_s_at </td> <td> 200787_s_at </td> <td> BC002426 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002426.1 /DEF=Homo sapiens, phosphoprotein enriched in astrocytes 15, clone MGC:1685, mRNA, complete cds.  /FEA=mRNA /PROD=phosphoprotein enriched in astrocytes 15 /DB_XREF=gi:12803230 /UG=Hs.194673 phosphoprotein enriched in astrocytes 15 /FL=gb:BC002426.1 gb:NM_003768.1 </td> <td> BC002426 </td> <td> phosphoprotein enriched in astrocytes 15 </td> <td> PEA15 </td> <td> 8682 </td> <td> NM_003768 /// XM_005245564 /// XM_006711598 /// XM_006711599 </td> <td> 0006810 // transport // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0046325 // negative regulation of glucose import // inferred from direct assay /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 1902043 // positive regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005875 // microtubule associated complex // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 41.32 </td> <td> 487.34 </td> <td> 1.11 </td> <td> 0.30 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211036_x_at </td> <td> 211036_x_at </td> <td> BC006301 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006301.1 /DEF=Homo sapiens, anaphase-promoting complex subunit 5, clone MGC:13295, mRNA, complete cds.  /FEA=mRNA /PROD=anaphase-promoting complex subunit 5 /DB_XREF=gi:13623410 /FL=gb:BC006301.1 </td> <td> BC006301 </td> <td> anaphase promoting complex subunit 5 </td> <td> ANAPC5 </td> <td> 51433 </td> <td> NM_001137559 /// NM_016237 /// XM_005253900 /// XM_006719449 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000090 // mitotic anaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction </td> <td> 33.40 </td> <td> 437.00 </td> <td> 1.10 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 217811_at </td> <td> 217811_at </td> <td> NM_016275 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016275.1 /DEF=Homo sapiens selenoprotein T (LOC51714), mRNA. /FEA=mRNA /GEN=LOC51714 /PROD=selenoprotein T /DB_XREF=gi:7706470 /UG=Hs.8148 selenoprotein T /FL=gb:AF131856.1 gb:AF195141.1 gb:NM_016275.1 </td> <td> NM_016275 </td> <td> selenoprotein T </td> <td> SELT </td> <td> 51714 </td> <td> NM_016275 </td> <td> 0001514 // selenocysteine incorporation // non-traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation </td> <td>  </td> <td> 0008430 // selenium binding // non-traceable author statement </td> <td> -40.68 </td> <td> 521.61 </td> <td> -1.10 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 221619_s_at </td> <td> 221619_s_at </td> <td> AF189289 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF189289.1 /DEF=Homo sapiens presenilin-associated protein mRNA, complete cds. /FEA=mRNA /PROD=presenilin-associated protein /DB_XREF=gi:6409315 /UG=Hs.279939 mitochondrial carrier homolog 1 /FL=gb:AF189289.1 </td> <td> AF189289 </td> <td> mitochondrial carrier 1 </td> <td> MTCH1 </td> <td> 23787 </td> <td> NM_001271641 /// NM_014341 /// XM_005248978 /// XM_005248979 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0009966 // regulation of signal transduction // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from expression pattern /// 0045161 // neuronal ion channel clustering // non-traceable author statement </td> <td> 0005622 // intracellular // non-traceable author statement /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -150.27 </td> <td> 1405.39 </td> <td> -1.10 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202413_s_at </td> <td> 202413_s_at </td> <td> NM_003368 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003368.1 /DEF=Homo sapiens ubiquitin specific protease 1 (USP1), mRNA. /FEA=mRNA /GEN=USP1 /PROD=ubiquitin specific protease 1 /DB_XREF=gi:4507850 /UG=Hs.35086 ubiquitin specific protease 1 /FL=gb:AB014458.1 gb:AF117386.1 gb:NM_003368.1 gb:AL117575.1 </td> <td> NM_003368 </td> <td> ubiquitin specific peptidase 1 </td> <td> USP1 </td> <td> 7398 </td> <td> NM_001017415 /// NM_001017416 /// NM_003368 </td> <td> 0006281 // DNA repair // traceable author statement /// 0006282 // regulation of DNA repair // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0009411 // response to UV // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from direct assay /// 0035520 // monoubiquitinated protein deubiquitination // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation </td> <td> -17.45 </td> <td> 287.18 </td> <td> -1.10 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202783_at </td> <td> 202783_at </td> <td> U40490 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U40490.1 /DEF=Human nicotinamide nucleotide transhydrogenase mRNA, nuclear gene encoding mitochondrial protein, complete cds.  /FEA=mRNA /PROD=nicotinamide nucleotide transhydrogenase /DB_XREF=gi:1110519 /UG=Hs.18136 nicotinamide nucleotide transhydrogenase /FL=gb:U40490.1 gb:NM_012343.1 </td> <td> U40490 </td> <td> nicotinamide nucleotide transhydrogenase </td> <td> NNT </td> <td> 23530 </td> <td> NM_012343 /// NM_182977 /// XM_005248274 /// XM_005248275 /// XM_006714461 </td> <td> 0006099 // tricarboxylic acid cycle // traceable author statement /// 0015992 // proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement /// 0072593 // reactive oxygen species metabolic process // inferred from mutant phenotype /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003957 // NAD(P)+ transhydrogenase (B-specific) activity // traceable author statement /// 0008746 // NAD(P)+ transhydrogenase activity // not recorded /// 0008750 // NAD(P)+ transhydrogenase (AB-specific) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050661 // NADP binding // inferred from direct assay /// 0051287 // NAD binding // traceable author statement </td> <td> 21.50 </td> <td> 82.58 </td> <td> 1.10 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 206809_s_at </td> <td> 206809_s_at </td> <td> NM_005758 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005758.1 /DEF=Homo sapiens heterogeneous nuclear protein similar to rat helix destabilizing protein (FBRNP), mRNA.  /FEA=mRNA /GEN=FBRNP /PROD=heterogeneous nuclear protein similar to rathelix destabilizing protein /DB_XREF=gi:5031692 /UG=Hs.249247 heterogeneous nuclear protein similar to rat helix destabilizing protein /FL=gb:NM_005758.1 </td> <td> NM_005758 </td> <td> heterogeneous nuclear ribonucleoprotein A3 /// heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 </td> <td> HNRNPA3 /// HNRNPA3P1 </td> <td> 10151 /// 220988 </td> <td> NM_194247 /// NR_002726 /// XM_005246380 /// XM_005246381 /// XM_005246382 /// XM_006712365 /// XR_427076 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 43.50 </td> <td> 346.15 </td> <td> 1.09 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 222230_s_at </td> <td> 222230_s_at </td> <td> AK022248 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK022248.1 /DEF=Homo sapiens cDNA FLJ12186 fis, clone MAMMA1000824, weakly similar to ACTIN.  /FEA=mRNA /DB_XREF=gi:10433604 /UG=Hs.274369 uncharacterized hypothalamus protein HARP11 </td> <td> AK022248 </td> <td> actin-related protein 10 homolog (S. cerevisiae) </td> <td> ACTR10 </td> <td> 55860 </td> <td> NM_018477 </td> <td> 0007018 // microtubule-based movement // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005869 // dynactin complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -40.50 </td> <td> 474.77 </td> <td> -1.09 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 217024_x_at </td> <td> 217024_x_at </td> <td> AC004832 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AC004832 /DEF=Homo sapiens PAC clone RP4-539M6 from 22 /FEA=CDS_3 /DB_XREF=gi:6624129 /UG=Hs.287353 Homo sapiens PAC clone RP4-539M6 from 22 </td> <td> AC004832 </td> <td> signal-regulatory protein alpha pseudogene 1 /// </td> <td> SIRPAP1 /// SIRPAP1 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -17.90 </td> <td> 36.48 </td> <td> -1.09 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201106_at </td> <td> 201106_at </td> <td> NM_002085 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002085.1 /DEF=Homo sapiens glutathione peroxidase 4 (phospholipid hydroperoxidase) (GPX4), mRNA.  /FEA=mRNA /GEN=GPX4 /PROD=glutathione peroxidase 4 /DB_XREF=gi:4504106 /UG=Hs.2706 glutathione peroxidase 4 (phospholipid hydroperoxidase) /FL=gb:NM_002085.1 </td> <td> NM_002085 </td> <td> glutathione peroxidase 4 </td> <td> GPX4 </td> <td> 2879 </td> <td> NM_001039847 /// NM_001039848 /// NM_002085 </td> <td> 0006325 // chromatin organization // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0019369 // arachidonic acid metabolic process // traceable author statement /// 0019372 // lipoxygenase pathway // traceable author statement /// 0032355 // response to estradiol // inferred from electronic annotation /// 0042744 // hydrogen peroxide catabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0055114 // oxidation-reduction process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004601 // peroxidase activity // inferred from electronic annotation /// 0004602 // glutathione peroxidase activity // traceable author statement /// 0008430 // selenium binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0043295 // glutathione binding // inferred from electronic annotation /// 0047066 // phospholipid-hydroperoxide glutathione peroxidase activity // inferred from electronic annotation </td> <td> -92.15 </td> <td> 777.80 </td> <td> -1.09 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 210986_s_at </td> <td> 210986_s_at </td> <td> Z24727 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:Z24727.1 /DEF=H.sapiens tropomyosin isoform mRNA, complete CDS. /FEA=mRNA /PROD=tropomyosin isoform /DB_XREF=gi:854188 /UG=Hs.77899 tropomyosin 1 (alpha) /FL=gb:Z24727.1 </td> <td> Z24727 </td> <td> tropomyosin 1 (alpha) </td> <td> TPM1 </td> <td> 7168 </td> <td> NM_000366 /// NM_001018004 /// NM_001018005 /// NM_001018006 /// NM_001018007 /// NM_001018008 /// NM_001018020 /// XM_005254637 /// XM_005254638 /// XM_005254639 /// XM_005254640 /// XM_005254641 /// XM_005254643 /// XM_005254644 /// XM_005254645 /// XM_005254646 /// XM_005254647 /// XM_005254648 /// XM_005254649 /// XM_005254650 /// XM_005254651 /// XM_005254652 /// XM_005254653 /// XM_006720667 /// XM_006720668 /// XM_006720669 /// XR_429470 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0003065 // positive regulation of heart rate by epinephrine // inferred from sequence or structural similarity /// 0006413 // translational initiation // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006937 // regulation of muscle contraction // traceable author statement /// 0007010 // cytoskeleton organization // traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0030049 // muscle filament sliding // inferred from sequence or structural similarity /// 0030049 // muscle filament sliding // traceable author statement /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0031529 // ruffle organization // inferred from sequence or structural similarity /// 0032781 // positive regulation of ATPase activity // inferred from sequence or structural similarity /// 0034614 // cellular response to reactive oxygen species // inferred from expression pattern /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0045214 // sarcomere organization // inferred from mutant phenotype /// 0045785 // positive regulation of cell adhesion // inferred from sequence or structural similarity /// 0051496 // positive regulation of stress fiber assembly // inferred from sequence or structural similarity /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from mutant phenotype /// 0060048 // cardiac muscle contraction // inferred from mutant phenotype </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005862 // muscle thin filament tropomyosin // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030017 // sarcomere // traceable author statement /// 0031941 // filamentous actin // inferred from electronic annotation /// 0032059 // bleb // inferred from mutant phenotype /// 0032587 // ruffle membrane // inferred from direct assay </td> <td> 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // traceable author statement </td> <td> -206.75 </td> <td> 1892.93 </td> <td> -1.09 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 207165_at </td> <td> 207165_at </td> <td> NM_012485 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012485.1 /DEF=Homo sapiens hyaluronan-mediated motility receptor (RHAMM) (HMMR), transcript variant 2, mRNA.  /FEA=mRNA /GEN=HMMR /PROD=hyaluronan-mediated motility receptor (RHAMM) /DB_XREF=gi:7108350 /UG=Hs.72550 hyaluronan-mediated motility receptor (RHAMM) /FL=gb:NM_012485.1 </td> <td> NM_012485 </td> <td> hyaluronan-mediated motility receptor (RHAMM) </td> <td> HMMR </td> <td> 3161 </td> <td> NM_001142556 /// NM_001142557 /// NM_012484 /// NM_012485 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030212 // hyaluronan metabolic process // traceable author statement /// 0030214 // hyaluronan catabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0005540 // hyaluronic acid binding // inferred from electronic annotation </td> <td> -33.38 </td> <td> 172.29 </td> <td> -1.09 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 205273_s_at </td> <td> 205273_s_at </td> <td> NM_014968 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014968.1 /DEF=Homo sapiens KIAA1104 protein (KIAA1104), mRNA. /FEA=mRNA /GEN=KIAA1104 /PROD=KIAA1104 protein /DB_XREF=gi:7662487 /UG=Hs.279039 KIAA1104 protein /FL=gb:AB029027.1 gb:NM_014968.1 </td> <td> NM_014968 </td> <td> pitrilysin metallopeptidase 1 </td> <td> PITRM1 </td> <td> 10531 </td> <td> NM_001242307 /// NM_001242309 /// NM_014889 /// NM_014968 /// XM_005252345 /// XM_006717362 /// XR_428633 </td> <td> 0006508 // proteolysis // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from mutant phenotype /// 0008047 // enzyme activator activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -61.73 </td> <td> 547.61 </td> <td> -1.09 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201319_at </td> <td> 201319_at </td> <td> NM_006471 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006471.1 /DEF=Homo sapiens myosin, light polypeptide, regulatory, non-sarcomeric (20kD) (MLCB), mRNA.  /FEA=mRNA /GEN=MLCB /PROD=myosin, light polypeptide, regulatory,non-sarcomeric (20kD) /DB_XREF=gi:5453739 /UG=Hs.233936 myosin, light polypeptide, regulatory, non-sarcomeric (20kD) /FL=gb:NM_006471.1 </td> <td> NM_006471 </td> <td> myosin, light chain 12A, regulatory, non-sarcomeric </td> <td> MYL12A </td> <td> 10627 </td> <td> NM_006471 /// XM_005258076 /// XM_005258077 /// XM_005258078 </td> <td> 0008360 // regulation of cell shape // inferred from electronic annotation /// 0072661 // protein targeting to plasma membrane // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0016460 // myosin II complex // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0035254 // glutamate receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -63.60 </td> <td> 475.12 </td> <td> -1.09 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 209536_s_at </td> <td> 209536_s_at </td> <td> AF320070 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF320070.1 /DEF=Homo sapiens hepatocellular carcinoma-associated protein HCA10 mRNA, complete cds.  /FEA=mRNA /PROD=hepatocellular carcinoma-associated proteinHCA10 /DB_XREF=gi:11386004 /UG=Hs.55058 EH-domain containing 4 /FL=gb:AF307137.1 gb:AF320070.1 gb:AF323924.1 </td> <td> AF320070 </td> <td> EH-domain containing 4 </td> <td> EHD4 </td> <td> 30844 </td> <td> NM_139265 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006907 // pinocytosis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from genetic interaction /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from physical interaction /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 33.57 </td> <td> 654.34 </td> <td> 1.09 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202779_s_at </td> <td> 202779_s_at </td> <td> NM_014501 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014501.1 /DEF=Homo sapiens ubiquitin carrier protein (E2-EPF), mRNA. /FEA=mRNA /GEN=E2-EPF /PROD=ubiquitin carrier protein /DB_XREF=gi:7657045 /UG=Hs.174070 ubiquitin carrier protein /FL=gb:M91670.1 gb:NM_014501.1 </td> <td> NM_014501 </td> <td> ubiquitin-conjugating enzyme E2S </td> <td> UBE2S </td> <td> 27338 </td> <td> NM_014501 </td> <td> 0006464 // cellular protein modification process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010458 // exit from mitosis // inferred from direct assay /// 0010458 // exit from mitosis // inferred from mutant phenotype /// 0010994 // free ubiquitin chain polymerization // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0035519 // protein K29-linked ubiquitination // inferred from direct assay /// 0044314 // protein K27-linked ubiquitination // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0051488 // activation of anaphase-promoting complex activity // inferred from direct assay /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0085020 // protein K6-linked ubiquitination // inferred from direct assay </td> <td> 0005680 // anaphase-promoting complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> 73.45 </td> <td> 519.62 </td> <td> 1.09 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 218605_at </td> <td> 218605_at </td> <td> NM_022366 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022366.1 /DEF=Homo sapiens hypothetical protein FLJ23182 (FLJ23182), mRNA. /FEA=mRNA /GEN=FLJ23182 /PROD=hypothetical protein FLJ23182 /DB_XREF=gi:11641288 /UG=Hs.7395 hypothetical protein FLJ23182 /FL=gb:NM_022366.1 gb:BC003383.1 </td> <td> NM_022366 </td> <td> transcription factor B2, mitochondrial </td> <td> TFB2M </td> <td> 64216 </td> <td> NM_022366 </td> <td> 0000154 // rRNA modification // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006390 // transcription from mitochondrial promoter // inferred from direct assay /// 0006390 // transcription from mitochondrial promoter // traceable author statement /// 0006391 // transcription initiation from mitochondrial promoter // inferred from direct assay /// 0006391 // transcription initiation from mitochondrial promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031167 // rRNA methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0042645 // mitochondrial nucleoid // inferred from direct assay </td> <td> 0000179 // rRNA (adenine-N6,N6-)-dimethyltransferase activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008649 // rRNA methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 42.98 </td> <td> 205.74 </td> <td> 1.09 </td> <td> 0.31 </td> <td> 0.39 </td> <td> -4.59 </td> </tr>
  <tr> <td> 217810_x_at </td> <td> 217810_x_at </td> <td> NM_020117 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020117.1 /DEF=Homo sapiens hypothetical protein FLJ10595 (FLJ10595), mRNA. /FEA=mRNA /GEN=FLJ10595 /PROD=hypothetical protein FLJ10595 /DB_XREF=gi:9910223 /UG=Hs.6762 hypothetical protein FLJ10595 /FL=gb:D84223.1 gb:NM_020117.1 </td> <td> NM_020117 </td> <td> leucyl-tRNA synthetase </td> <td> LARS </td> <td> 51520 </td> <td> NM_020117 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006429 // leucyl-tRNA aminoacylation // inferred from electronic annotation /// 0006450 // regulation of translational fidelity // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0002161 // aminoacyl-tRNA editing activity // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004823 // leucine-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> 22.32 </td> <td> 184.71 </td> <td> 1.08 </td> <td> 0.31 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201096_s_at </td> <td> 201096_s_at </td> <td> AL537042 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL537042 /FEA=EST /DB_XREF=gi:12800535 /DB_XREF=est:AL537042 /CLONE=CS0DF017YF17 (5 prime) /UG=Hs.75290 ADP-ribosylation factor 4 /FL=gb:BC003364.1 gb:M36341.1 gb:NM_001660.2 </td> <td> AL537042 </td> <td> ADP-ribosylation factor 4 </td> <td> ARF4 </td> <td> 378 </td> <td> NM_001660 </td> <td> 0006471 // protein ADP-ribosylation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0031584 // activation of phospholipase D activity // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048678 // response to axon injury // inferred from electronic annotation /// 2000377 // regulation of reactive oxygen species metabolic process // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation </td> <td> 122.95 </td> <td> 1120.85 </td> <td> 1.08 </td> <td> 0.31 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 217906_at </td> <td> 217906_at </td> <td> NM_014315 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014315.1 /DEF=Homo sapiens host cell factor homolog (LCP), mRNA. /FEA=mRNA /GEN=LCP /PROD=host cell factor homolog /DB_XREF=gi:7657300 /UG=Hs.20597 host cell factor homolog /FL=gb:BC002335.1 gb:AF113131.1 gb:NM_014315.1 gb:AF244137.1 </td> <td> NM_014315 </td> <td> kelch domain containing 2 </td> <td> KLHDC2 </td> <td> 23588 </td> <td> NM_014315 /// XM_006720094 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -15.72 </td> <td> 214.09 </td> <td> -1.08 </td> <td> 0.31 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201459_at </td> <td> 201459_at </td> <td> NM_006666 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006666.1 /DEF=Homo sapiens RuvB (E coli homolog)-like 2 (RUVBL2), mRNA. /FEA=mRNA /GEN=RUVBL2 /PROD=RuvB (E coli homolog)-like 2 /DB_XREF=gi:5730022 /UG=Hs.6455 RuvB (E coli homolog)-like 2 /FL=gb:BC000428.1 gb:BC004531.1 gb:AB024301.1 gb:AF151804.1 gb:AF155138.1 gb:NM_006666.1 gb:AL136743.1 gb:AF124607.1 </td> <td> NM_006666 </td> <td> RuvB-like AAA ATPase 2 </td> <td> RUVBL2 </td> <td> 10856 </td> <td> NM_006666 /// XM_005258426 /// XM_005258427 /// XM_005258428 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006325 // chromatin organization // traceable author statement /// 0006338 // chromatin remodeling // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement /// 0034644 // cellular response to UV // inferred from mutant phenotype /// 0035066 // positive regulation of histone acetylation // inferred from mutant phenotype /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0043968 // histone H2A acetylation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0071169 // establishment of protein localization to chromatin // inferred from mutant phenotype /// 0071392 // cellular response to estradiol stimulus // inferred from mutant phenotype /// 0071733 // transcriptional activation by promoter-enhancer looping // inferred from mutant phenotype /// 0071899 // negative regulation of estrogen receptor binding // inferred from mutant phenotype </td> <td> 0000812 // Swr1 complex // inferred from direct assay /// 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031011 // Ino80 complex // inferred from direct assay /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003678 // DNA helicase activity // inferred from direct assay /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0031490 // chromatin DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0043141 // ATP-dependent 5'-3' DNA helicase activity // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement </td> <td> -21.00 </td> <td> 210.78 </td> <td> -1.08 </td> <td> 0.31 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211270_x_at </td> <td> 211270_x_at </td> <td> BC002397 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002397.1 /DEF=Homo sapiens, polypyrimidine tract binding protein (heterogeneous nuclear ribonucleoprotein I), clone MGC:8461, mRNA, complete cds.  /FEA=mRNA /PROD=polypyrimidine tract binding protein(heterogeneous nuclear ribonucleoprotein I) /DB_XREF=gi:12803182 /UG=Hs.172550 polypyrimidine tract binding protein (heterogeneous nuclear ribonucleoprotein I) /FL=gb:BC002397.1 </td> <td> BC002397 </td> <td> polypyrimidine tract binding protein 1 </td> <td> PTBP1 </td> <td> 5725 </td> <td> NM_002819 /// NM_031990 /// NM_031991 /// NM_175847 /// XM_005259597 /// XM_005259598 /// XR_244034 /// XR_244035 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0051148 // negative regulation of muscle cell differentiation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008187 // poly-pyrimidine tract binding // traceable author statement /// 0036002 // pre-mRNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 89.10 </td> <td> 681.80 </td> <td> 1.08 </td> <td> 0.31 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201072_s_at </td> <td> 201072_s_at </td> <td> AW152160 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW152160 /FEA=EST /DB_XREF=gi:6200058 /DB_XREF=est:xf75e01.x1 /CLONE=IMAGE:2623896 /UG=Hs.172280 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 /FL=gb:U66615.1 gb:NM_003074.1 </td> <td> AW152160 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 </td> <td> SMARCC1 </td> <td> 6599 </td> <td> NM_003074 </td> <td> 0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0001741 // XY body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from sequence or structural similarity /// 0071778 // WINAC complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -14.27 </td> <td> 99.54 </td> <td> -1.08 </td> <td> 0.31 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 214431_at </td> <td> 214431_at </td> <td> NM_003875 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_003875.1 /DEF=Homo sapiens guanine monphosphate synthetase (GMPS), mRNA. /FEA=CDS /GEN=GMPS /PROD=guanine monophosphate synthetase /DB_XREF=gi:4504034 /UG=Hs.5398 guanine monphosphate synthetase /FL=gb:NM_003875.1 gb:U10860.1 </td> <td> NM_003875 </td> <td> guanine monphosphate synthase </td> <td> GMPS </td> <td> 8833 </td> <td> NM_003875 </td> <td> 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006177 // GMP biosynthetic process // inferred from electronic annotation /// 0006529 // asparagine biosynthetic process // inferred from electronic annotation /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0009113 // purine nucleobase biosynthetic process // traceable author statement /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003921 // GMP synthase activity // traceable author statement /// 0003922 // GMP synthase (glutamine-hydrolyzing) activity // inferred from electronic annotation /// 0004066 // asparagine synthase (glutamine-hydrolyzing) activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016462 // pyrophosphatase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> 28.15 </td> <td> 108.33 </td> <td> 1.08 </td> <td> 0.31 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 221580_s_at </td> <td> 221580_s_at </td> <td> BC001972 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001972.1 /DEF=Homo sapiens, clone MGC:5306, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:5306) /DB_XREF=gi:12805036 /UG=Hs.301732 hypothetical protein MGC5306 /FL=gb:BC001972.1 </td> <td> BC001972 </td> <td> microRNA 1304 /// small nucleolar RNA, H/ACA box 1 /// small nucleolar RNA, H/ACA box 18 /// small nucleolar RNA, H/ACA box 32 /// small nucleolar RNA, H/ACA box 40 /// small nucleolar RNA, H/ACA box 8 /// small nucleolar RNA, C/D box 5 /// TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa </td> <td> MIR1304 /// SNORA1 /// SNORA18 /// SNORA32 /// SNORA40 /// SNORA8 /// SNORD5 /// TAF1D </td> <td> 79101 /// 654320 /// 677792 /// 677805 /// 677822 /// 692063 /// 692072 /// 100302240 </td> <td> NM_024116 /// NR_002920 /// NR_002959 /// NR_002973 /// NR_003026 /// NR_003032 /// NR_003033 /// NR_031639 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006362 // transcription elongation from RNA polymerase I promoter // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005668 // RNA polymerase transcription factor SL1 complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 27.93 </td> <td> 292.84 </td> <td> 1.08 </td> <td> 0.31 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 207809_s_at </td> <td> 207809_s_at </td> <td> NM_001183 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001183.1 /DEF=Homo sapiens ATPase, H+ transporting, lysosomal (vacuolar proton pump), subunit 1 (ATP6S1), mRNA.  /FEA=mRNA /GEN=ATP6S1 /PROD=ATPase, H+ transporting, lysosomal subunit 1 /DB_XREF=gi:4557340 /UG=Hs.6551 ATPase, H+ transporting, lysosomal (vacuolar proton pump), subunit 1 /FL=gb:NM_001183.1 </td> <td> NM_001183 </td> <td> ATPase, H+ transporting, lysosomal accessory protein 1 </td> <td> ATP6AP1 </td> <td> 537 </td> <td> NM_001183 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045780 // positive regulation of bone resorption // inferred from sequence or structural similarity /// 0045851 // pH reduction // inferred from sequence or structural similarity /// 0045921 // positive regulation of exocytosis // inferred from sequence or structural similarity /// 0051656 // establishment of organelle localization // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 2001206 // positive regulation of osteoclast development // inferred from sequence or structural similarity </td> <td> 0005773 // vacuole // inferred from electronic annotation /// 0005774 // vacuolar membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // traceable author statement /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from sequence or structural similarity /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation </td> <td> 23.82 </td> <td> 561.59 </td> <td> 1.08 </td> <td> 0.31 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201399_s_at </td> <td> 201399_s_at </td> <td> NM_014294 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014294.1 /DEF=Homo sapiens translocating chain-associating membrane protein (TRAM), mRNA.  /FEA=mRNA /GEN=TRAM /PROD=translocating chain-associating membraneprotein /DB_XREF=gi:7657654 /UG=Hs.4147 translocating chain-associating membrane protein /FL=gb:BC000687.1 gb:NM_014294.1 </td> <td> NM_014294 </td> <td> translocation associated membrane protein 1 </td> <td> TRAM1 </td> <td> 23471 </td> <td> NM_014294 </td> <td> 0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -76.58 </td> <td> 619.09 </td> <td> -1.08 </td> <td> 0.31 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201064_s_at </td> <td> 201064_s_at </td> <td> NM_003819 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003819.2 /DEF=Homo sapiens poly(A)-binding protein, cytoplasmic 4 (inducible form) (PABPC4), mRNA.  /FEA=mRNA /GEN=PABPC4 /PROD=poly(A)-binding protein, cytoplasmic 4(inducible form) /DB_XREF=gi:6552335 /UG=Hs.169900 poly(A)-binding protein, cytoplasmic 4 (inducible form) /FL=gb:NM_003819.2 </td> <td> NM_003819 </td> <td> polyadenylate-binding protein 4-like /// poly(A) binding protein, cytoplasmic 4 (inducible form) </td> <td> LOC100996696 /// PABPC4 </td> <td> 8761 /// 100996696 </td> <td> NM_001135653 /// NM_001135654 /// NM_003819 /// XM_005269266 /// XM_005275723 /// XM_005276424 </td> <td> 0006396 // RNA processing // traceable author statement /// 0006401 // RNA catabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0007596 // blood coagulation // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) binding // inferred from direct assay /// 0008266 // poly(U) RNA binding // inferred from direct assay /// 0017130 // poly(C) RNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -57.03 </td> <td> 455.64 </td> <td> -1.08 </td> <td> 0.31 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 213408_s_at </td> <td> 213408_s_at </td> <td> AK024034 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024034.1 /DEF=Homo sapiens cDNA FLJ13972 fis, clone Y79AA1001548, highly similar to PHOSPHATIDYLINOSITOL 4-KINASE ALPHA (EC 2.7.1.67).  /FEA=mRNA /DB_XREF=gi:10436297 /UG=Hs.171625 phosphatidylinositol 4-kinase, catalytic, alpha polypeptide </td> <td> AK024034 </td> <td> phosphatidylinositol 4-kinase, catalytic, alpha /// phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1 /// phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 2 </td> <td> PI4KA /// PI4KAP1 /// PI4KAP2 </td> <td> 5297 /// 375133 /// 728233 </td> <td> NM_002650 /// NM_058004 /// NR_003563 /// NR_003700 /// XM_005261634 /// XM_005261635 /// XR_249020 </td> <td> 0006644 // phospholipid metabolic process // traceable author statement /// 0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005798 // Golgi-associated vesicle // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004430 // 1-phosphatidylinositol 4-kinase activity // not recorded /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation </td> <td> 20.35 </td> <td> 205.97 </td> <td> 1.08 </td> <td> 0.31 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 207163_s_at </td> <td> 207163_s_at </td> <td> NM_005163 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005163.1 /DEF=Homo sapiens v-akt murine thymoma viral oncogene homolog 1 (AKT1), mRNA.  /FEA=mRNA /GEN=AKT1 /PROD=serinethreonine protein kinase /DB_XREF=gi:4885060 /UG=Hs.71816 v-akt murine thymoma viral oncogene homolog 1 /FL=gb:M63167.1 gb:NM_005163.1 </td> <td> NM_005163 </td> <td> v-akt murine thymoma viral oncogene homolog 1 </td> <td> AKT1 </td> <td> 207 </td> <td> NM_001014431 /// NM_001014432 /// NM_005163 /// XM_005267401 </td> <td> 0000060 // protein import into nucleus, translocation // inferred from mutant phenotype /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001893 // maternal placenta development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0005979 // regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006809 // nitric oxide biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006924 // activation-induced cell death of T cells // inferred from mutant phenotype /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from mutant phenotype /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0009408 // response to heat // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010507 // negative regulation of autophagy // inferred from mutant phenotype /// 0010748 // negative regulation of plasma membrane long-chain fatty acid transport // inferred from mutant phenotype /// 0010765 // positive regulation of sodium ion transport // inferred from electronic annotation /// 0010907 // positive regulation of glucose metabolic process // inferred from mutant phenotype /// 0010951 // negative regulation of endopeptidase activity // inferred from mutant phenotype /// 0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0015758 // glucose transport // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030212 // hyaluronan metabolic process // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0030334 // regulation of cell migration // traceable author statement /// 0031018 // endocrine pancreas development // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0031659 // positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle // inferred from direct assay /// 0031999 // negative regulation of fatty acid beta-oxidation // inferred from mutant phenotype /// 0032094 // response to food // inferred from electronic annotation /// 0032270 // positive regulation of cellular protein metabolic process // inferred from sequence or structural similarity /// 0032287 // peripheral nervous system myelin maintenance // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034405 // response to fluid shear stress // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0043491 // protein kinase B signaling // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from mutant phenotype /// 0045600 // positive regulation of fat cell differentiation // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // non-traceable author statement /// 0045792 // negative regulation of cell size // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // inferred from mutant phenotype /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation /// 0046777 // protein autophosphorylation // traceable author statement /// 0046889 // positive regulation of lipid biosynthetic process // inferred from mutant phenotype /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from mutant phenotype /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0060644 // mammary gland epithelial cell differentiation // traceable author statement /// 0060709 // glycogen cell differentiation involved in embryonic placenta development // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0070141 // response to UV-A // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 0090004 // positive regulation of establishment of protein localization to plasma membrane // inferred from mutant phenotype /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 0097194 // execution phase of apoptosis // inferred from electronic annotation /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement /// 1901976 // regulation of cell cycle checkpoint // traceable author statement /// 1902176 // negative regulation of intrinsic apoptotic signaling pathway in response to oxidative stress // non-traceable author statement /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred by curator /// 0005524 // ATP binding // inferred from direct assay /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0016301 // kinase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030235 // nitric-oxide synthase regulator activity // inferred from mutant phenotype /// 0042802 // identical protein binding // inferred from physical interaction /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay /// 0071889 // 14-3-3 protein binding // inferred from physical interaction </td> <td> 21.75 </td> <td> 259.38 </td> <td> 1.08 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 220659_s_at </td> <td> 220659_s_at </td> <td> NM_018275 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018275.1 /DEF=Homo sapiens hypothetical protein FLJ10925 (FLJ10925), mRNA. /FEA=mRNA /GEN=FLJ10925 /PROD=hypothetical protein FLJ10925 /DB_XREF=gi:8922774 /UG=Hs.23241 hypothetical protein FLJ10925 /FL=gb:AL136555.1 gb:NM_018275.1 </td> <td> NM_018275 </td> <td> chromosome 7 open reading frame 43 </td> <td> C7orf43 </td> <td> 55262 </td> <td> NM_018275 </td> <td>  </td> <td>  </td> <td>  </td> <td> -18.23 </td> <td> 31.39 </td> <td> -1.08 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202144_s_at </td> <td> 202144_s_at </td> <td> NM_000026 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000026.1 /DEF=Homo sapiens adenylosuccinate lyase (ADSL), mRNA. /FEA=mRNA /GEN=ADSL /PROD=adenylosuccinate lyase /DB_XREF=gi:4557268 /UG=Hs.75527 adenylosuccinate lyase /FL=gb:AF067853.1 gb:NM_000026.1 </td> <td> NM_000026 </td> <td> adenylosuccinate lyase </td> <td> ADSL </td> <td> 158 </td> <td> NM_000026 /// NM_001123378 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006163 // purine nucleotide metabolic process // inferred from electronic annotation /// 0006164 // purine nucleotide biosynthetic process // inferred by curator /// 0006167 // AMP biosynthetic process // inferred from direct assay /// 0006189 // 'de novo' IMP biosynthetic process // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from direct assay /// 0009060 // aerobic respiration // inferred from electronic annotation /// 0009152 // purine ribonucleotide biosynthetic process // inferred from electronic annotation /// 0009156 // ribonucleoside monophosphate biosynthetic process // inferred from electronic annotation /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0014850 // response to muscle activity // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0044208 // 'de novo' AMP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051262 // protein tetramerization // inferred from direct assay /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004018 // N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity // inferred from direct assay /// 0004018 // N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0070626 // (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity // inferred from electronic annotation </td> <td> -39.20 </td> <td> 350.00 </td> <td> -1.07 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 215128_at </td> <td> 215128_at </td> <td> AV704232 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV704232 /FEA=EST /DB_XREF=gi:10721550 /DB_XREF=est:AV704232 /CLONE=ADBBLB11 /UG=Hs.228096 Homo sapiens cDNA FLJ11682 fis, clone HEMBA1004880 </td> <td> AV704232 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 20.70 </td> <td> 93.83 </td> <td> 1.07 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211681_s_at </td> <td> 211681_s_at </td> <td> AF116705 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF116705.1 /DEF=Homo sapiens PRO2489 mRNA, complete cds. /FEA=mRNA /PROD=PRO2489 /DB_XREF=gi:7959908 /FL=gb:AF116705.1 </td> <td> AF116705 </td> <td> PDZ and LIM domain 5 </td> <td> PDLIM5 </td> <td> 10611 </td> <td> NM_001011513 /// NM_001011515 /// NM_001011516 /// NM_001256425 /// NM_001256426 /// NM_001256427 /// NM_001256428 /// NM_001256429 /// NM_006457 /// NR_046186 /// XM_005262693 /// XM_005262695 /// XM_005262696 /// XM_005262698 /// XM_006714066 /// XM_006714067 /// XM_006714068 /// XM_006714069 /// XM_006714070 </td> <td> 0051963 // regulation of synapse assembly // inferred from sequence or structural similarity /// 0061001 // regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042805 // actinin binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -20.20 </td> <td> 184.22 </td> <td> -1.07 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 221794_at </td> <td> 221794_at </td> <td> AI198543 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI198543 /FEA=EST /DB_XREF=gi:3751149 /DB_XREF=est:qf49f11.x1 /CLONE=IMAGE:1753389 /UG=Hs.8982 ESTs, Highly similar to KIAA1395 protein H.sapiens </td> <td> AI198543 </td> <td> dedicator of cytokinesis 6 </td> <td> DOCK6 </td> <td> 57572 </td> <td> NM_020812 /// XM_005260000 /// XM_005260001 /// XM_006722802 /// XM_006722803 /// XM_006722804 </td> <td> 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation </td> <td> 16.13 </td> <td> 183.84 </td> <td> 1.07 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 219397_at </td> <td> 219397_at </td> <td> NM_025147 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025147.1 /DEF=Homo sapiens hypothetical protein FLJ13448 (FLJ13448), mRNA. /FEA=mRNA /GEN=FLJ13448 /PROD=hypothetical protein FLJ13448 /DB_XREF=gi:13376736 /UG=Hs.288945 hypothetical protein FLJ13448 /FL=gb:NM_025147.1 </td> <td> NM_025147 </td> <td> coenzyme Q10 homolog B (S. cerevisiae) </td> <td> COQ10B </td> <td> 80219 </td> <td> NM_025147 /// XM_006712776 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td>  </td> <td> -23.70 </td> <td> 181.68 </td> <td> -1.07 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 215905_s_at </td> <td> 215905_s_at </td> <td> AL157420 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL157420.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434D199 (from clone DKFZp434D199); partial cds.  /FEA=mRNA /GEN=DKFZp434D199 /PROD=hypothetical protein /DB_XREF=gi:7018441 /UG=Hs.10290 U5 snRNP-specific 40 kDa protein (hPrp8-binding) </td> <td> AL157420 </td> <td> small nuclear ribonucleoprotein 40kDa (U5) </td> <td> SNRNP40 </td> <td> 9410 </td> <td> NM_004814 </td> <td> 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005682 // U5 snRNP // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005732 // small nucleolar ribonucleoprotein complex // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 24.57 </td> <td> 193.74 </td> <td> 1.07 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201113_at </td> <td> 201113_at </td> <td> NM_003321 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003321.1 /DEF=Homo sapiens Tu translation elongation factor, mitochondrial (TUFM), mRNA.  /FEA=mRNA /GEN=TUFM /PROD=Tu translation elongation factor, mitochondrial /DB_XREF=gi:4507732 /UG=Hs.12084 Tu translation elongation factor, mitochondrial /FL=gb:BC001633.1 gb:NM_003321.1 gb:L38995.1 </td> <td> NM_003321 </td> <td> Tu translation elongation factor, mitochondrial </td> <td> TUFM </td> <td> 7284 </td> <td> NM_003321 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -41.58 </td> <td> 490.34 </td> <td> -1.07 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 219911_s_at </td> <td> 219911_s_at </td> <td> NM_016354 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016354.1 /DEF=Homo sapiens solute carrier family 21 (organic anion transporter), member 12 (SLC21A12), mRNA.  /FEA=mRNA /GEN=SLC21A12 /PROD=organic anion transporter OATP-E /DB_XREF=gi:7706516 /UG=Hs.235782 solute carrier family 21 (organic anion transporter), member 12 /FL=gb:AF205072.1 gb:AF187817.1 gb:AB031051.1 gb:NM_016354.1 </td> <td> NM_016354 </td> <td> solute carrier organic anion transporter family, member 4A1 </td> <td> SLCO4A1 </td> <td> 28231 </td> <td> NM_016354 /// XM_005260203 /// XR_244115 /// XR_244116 /// XR_244117 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0043252 // sodium-independent organic anion transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -15.52 </td> <td> 29.56 </td> <td> -1.07 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 213564_x_at </td> <td> 213564_x_at </td> <td> BE042354 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE042354 /FEA=EST /DB_XREF=gi:8359407 /DB_XREF=est:ho19b09.x1 /CLONE=IMAGE:3037817 /UG=Hs.234489 lactate dehydrogenase B </td> <td> BE042354 </td> <td> lactate dehydrogenase B </td> <td> LDHB </td> <td> 3945 </td> <td> NM_001174097 /// NM_002300 /// XM_006719074 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006089 // lactate metabolic process // inferred from electronic annotation /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0019674 // NAD metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044262 // cellular carbohydrate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004457 // lactate dehydrogenase activity // inferred from electronic annotation /// 0004459 // L-lactate dehydrogenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 112.73 </td> <td> 2275.99 </td> <td> 1.06 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201216_at </td> <td> 201216_at </td> <td> NM_006817 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006817.2 /DEF=Homo sapiens endoplasmic reticulum lumenal protein (ERP28), mRNA. /FEA=mRNA /GEN=ERP28 /PROD=endoplasmic reticulum lumenal protein ERp28precursor /DB_XREF=gi:13124889 /UG=Hs.75841 endoplasmic reticulum lumenal protein /FL=gb:NM_006817.2 </td> <td> NM_006817 </td> <td> endoplasmic reticulum protein 29 </td> <td> ERP29 </td> <td> 10961 </td> <td> NM_001034025 /// NM_006817 </td> <td> 0006457 // protein folding // traceable author statement /// 0006886 // intracellular protein transport // traceable author statement /// 0009306 // protein secretion // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003756 // protein disulfide isomerase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -33.27 </td> <td> 337.11 </td> <td> -1.06 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 210386_s_at </td> <td> 210386_s_at </td> <td> BC001906 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001906.1 /DEF=Homo sapiens, Similar to metaxin 1, clone MGC:2518, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to metaxin 1 /DB_XREF=gi:12804906 /UG=Hs.247551 metaxin 1 /FL=gb:BC001906.1 </td> <td> BC001906 </td> <td> metaxin 1 </td> <td> MTX1 </td> <td> 4580 </td> <td> NM_002455 /// NM_198883 /// XM_006711338 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 18.25 </td> <td> 223.28 </td> <td> 1.06 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211402_x_at </td> <td> 211402_x_at </td> <td> AF004291 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF004291.1 /DEF=Homo sapiens germ cell nuclear factor (GCNF) mRNA, complete cds. /FEA=mRNA /GEN=GCNF /PROD=germ cell nuclear factor /DB_XREF=gi:2209118 /UG=Hs.278599 nuclear receptor subfamily 6, group A, member 1 /FL=gb:AF004291.1 </td> <td> AF004291 </td> <td> nuclear receptor subfamily 6, group A, member 1 </td> <td> NR6A1 </td> <td> 2649 </td> <td> NM_001278546 /// NM_001489 /// NM_033334 /// NM_033335 /// XM_005251917 /// XM_005251918 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007276 // gamete generation // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030522 // intracellular receptor signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -14.82 </td> <td> 43.61 </td> <td> -1.06 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200772_x_at </td> <td> 200772_x_at </td> <td> BF686442 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF686442 /FEA=EST /DB_XREF=gi:11971850 /DB_XREF=est:602143234F1 /CLONE=IMAGE:4304193 /UG=Hs.250655 prothymosin, alpha (gene sequence 28) /FL=gb:BC003510.1 gb:M26708.1 gb:M14630.1 gb:NM_002823.1 </td> <td> BF686442 </td> <td> prothymosin alpha-like /// prothymosin alpha-like /// microRNA 1244-1 /// microRNA 1244-2 /// microRNA 1244-3 /// prothymosin, alpha </td> <td> LOC100506248 /// LOC728026 /// MIR1244-1 /// MIR1244-2 /// MIR1244-3 /// PTMA </td> <td> 5757 /// 728026 /// 100302285 /// 100422872 /// 100422885 /// 100506248 </td> <td> NM_001099285 /// NM_002823 /// NR_036052 /// NR_036262 /// NR_036263 /// XM_001126659 /// XM_003960458 /// XM_005275719 /// XM_005276418 </td> <td> 0006351 // transcription, DNA-templated // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> -85.85 </td> <td> 1800.80 </td> <td> -1.06 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 209526_s_at </td> <td> 209526_s_at </td> <td> AB029156 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB029156.1 /DEF=Homo sapiens HRP-3 mRNA, complete cds. /FEA=mRNA /GEN=HRP-3 /PROD=HRP-3 /DB_XREF=gi:6855467 /UG=Hs.127842 CGI-142 /FL=gb:AF151900.1 gb:AB029156.1 gb:NM_016073.1 </td> <td> AB029156 </td> <td> hepatoma-derived growth factor, related protein 3 </td> <td> HDGFRP3 </td> <td> 50810 </td> <td> NM_016073 /// XM_006720554 </td> <td> 0008283 // cell proliferation // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0008083 // growth factor activity // inferred from electronic annotation </td> <td> -43.42 </td> <td> 618.91 </td> <td> -1.06 </td> <td> 0.32 </td> <td> 0.40 </td> <td> -4.59 </td> </tr>
  <tr> <td> 221607_x_at </td> <td> 221607_x_at </td> <td> BC001920 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001920.1 /DEF=Homo sapiens, actin, gamma 1, clone MGC:3728, mRNA, complete cds. /FEA=mRNA /PROD=actin, gamma 1 /DB_XREF=gi:12804934 /UG=Hs.14376 actin, gamma 1 /FL=gb:BC001920.1 </td> <td> BC001920 </td> <td> actin, beta /// actin, gamma 1 </td> <td> ACTB /// ACTG1 </td> <td> 60 /// 71 </td> <td> NM_001101 /// NM_001199954 /// NM_001614 /// NR_037688 /// XM_006715764 /// XM_006722048 /// XM_006722049 </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0006325 // chromatin organization // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred by curator /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction </td> <td> -409.82 </td> <td> 4914.36 </td> <td> -1.06 </td> <td> 0.32 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 218389_s_at </td> <td> 218389_s_at </td> <td> NM_016022 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016022.1 /DEF=Homo sapiens CGI-78 protein (LOC51107), mRNA. /FEA=mRNA /GEN=LOC51107 /PROD=CGI-78 protein /DB_XREF=gi:7705786 /UG=Hs.108408 CGI-78 protein /FL=gb:AF151835.1 gb:NM_016022.1 </td> <td> NM_016022 </td> <td> APH1A gamma secretase subunit </td> <td> APH1A </td> <td> 51107 </td> <td> NM_001077628 /// NM_001243771 /// NM_001243772 /// NM_016022 /// NR_045033 /// NR_045034 /// NR_045035 /// XM_006711362 </td> <td> 0001656 // metanephros development // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // inferred from mutant phenotype /// 0007220 // Notch receptor processing // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0031293 // membrane protein intracellular domain proteolysis // inferred from mutant phenotype /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0042987 // amyloid precursor protein catabolic process // inferred from mutant phenotype /// 0042987 // amyloid precursor protein catabolic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 52.18 </td> <td> 290.64 </td> <td> 1.06 </td> <td> 0.32 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 214581_x_at </td> <td> 214581_x_at </td> <td> BE568134 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE568134 /FEA=EST /DB_XREF=gi:9811854 /DB_XREF=est:601341661F1 /CLONE=IMAGE:3683823 /UG=Hs.159651 death receptor 6 /FL=gb:AF068868.1 gb:NM_014452.1 </td> <td> BE568134 </td> <td> tumor necrosis factor receptor superfamily, member 21 </td> <td> TNFRSF21 </td> <td> 27242 </td> <td> NM_014452 </td> <td> 0001783 // B cell apoptotic process // inferred from sequence or structural similarity /// 0002250 // adaptive immune response // inferred from sequence or structural similarity /// 0002376 // immune system process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006959 // humoral immune response // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0030889 // negative regulation of B cell proliferation // inferred from sequence or structural similarity /// 0031642 // negative regulation of myelination // inferred from mutant phenotype /// 0042130 // negative regulation of T cell proliferation // inferred from sequence or structural similarity /// 0042552 // myelination // inferred from sequence or structural similarity /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048713 // regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0051402 // neuron apoptotic process // inferred from sequence or structural similarity /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0097252 // oligodendrocyte apoptotic process // inferred from sequence or structural similarity /// 2000663 // negative regulation of interleukin-5 secretion // inferred from sequence or structural similarity /// 2000666 // negative regulation of interleukin-13 secretion // inferred from sequence or structural similarity /// 2001180 // negative regulation of interleukin-10 secretion // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0031226 // intrinsic component of plasma membrane // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 38.25 </td> <td> 187.30 </td> <td> 1.06 </td> <td> 0.32 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 219978_s_at </td> <td> 219978_s_at </td> <td> NM_018454 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018454.1 /DEF=Homo sapiens uncharacterized bone marrow protein BM037 (BM037), mRNA.  /FEA=mRNA /GEN=BM037 /PROD=uncharacterized bone marrow protein BM037 /DB_XREF=gi:8922094 /UG=Hs.283649 uncharacterized bone marrow protein BM037 /FL=gb:AF217513.1 gb:NM_018454.1 </td> <td> NM_018454 </td> <td> nucleolar and spindle associated protein 1 </td> <td> NUSAP1 </td> <td> 51203 </td> <td> NM_001129897 /// NM_001243142 /// NM_001243143 /// NM_001243144 /// NM_016359 /// NM_018454 /// XM_005254428 /// XM_005254429 /// XM_005254430 /// XM_005254431 /// XM_006720559 /// XM_006720560 /// XM_006720561 /// XM_006720562 /// XM_006720563 </td> <td> 0000070 // mitotic sister chromatid segregation // inferred from direct assay /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000281 // mitotic cytokinesis // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007076 // mitotic chromosome condensation // inferred from direct assay /// 0040001 // establishment of mitotic spindle localization // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -24.25 </td> <td> 137.68 </td> <td> -1.06 </td> <td> 0.32 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201503_at </td> <td> 201503_at </td> <td> BG500067 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG500067 /FEA=EST /DB_XREF=gi:13461584 /DB_XREF=est:602545874F1 /CLONE=IMAGE:4668234 /UG=Hs.220689 Ras-GTPase-activating protein SH3-domain-binding protein /FL=gb:U32519.1 gb:NM_005754.1 </td> <td> BG500067 </td> <td> GTPase activating protein (SH3 domain) binding protein 1 </td> <td> G3BP1 </td> <td> 10146 </td> <td> NM_005754 /// NM_198395 /// XM_006714749 /// XM_006714750 </td> <td> 0006200 // ATP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 20.75 </td> <td> 447.93 </td> <td> 1.06 </td> <td> 0.32 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 45526_g_at </td> <td> 45526_g_at </td> <td> AI246641 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI246641:qn65h10.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-1903171 /clone_end=3' /gb=AI246641 /gi=3842038 /ug=Hs.235980 /len=451 </td> <td> AI246641 </td> <td> N(alpha)-acetyltransferase 60, NatF catalytic subunit </td> <td> NAA60 </td> <td> 79903 </td> <td> NM_001083600 /// NM_001083601 /// NM_024845 /// XM_006720949 /// XM_006720950 /// XM_006720951 /// XM_006720952 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006334 // nucleosome assembly // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0017196 // N-terminal peptidyl-methionine acetylation // inferred from direct assay /// 0043967 // histone H4 acetylation // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004596 // peptide alpha-N-acetyltransferase activity // inferred from direct assay /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0010485 // H4 histone acetyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation </td> <td> 21.18 </td> <td> 419.11 </td> <td> 1.06 </td> <td> 0.32 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200728_at </td> <td> 200728_at </td> <td> BE566290 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE566290 /FEA=EST /DB_XREF=gi:9810010 /DB_XREF=est:601339864F1 /CLONE=IMAGE:3682406 /UG=Hs.42915 ARP2 (actin-related protein 2, yeast) homolog /FL=gb:AF006082.1 gb:NM_005722.1 </td> <td> BE566290 </td> <td> ARP2 actin-related protein 2 homolog (yeast) </td> <td> ACTR2 </td> <td> 10097 </td> <td> NM_001005386 /// NM_005722 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0008356 // asymmetric cell division // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation /// 0033206 // meiotic cytokinesis // inferred from electronic annotation /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051321 // meiotic cell cycle // inferred from electronic annotation /// 0051653 // spindle localization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // inferred from reviewed computational analysis /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030478 // actin cap // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> 85.67 </td> <td> 818.94 </td> <td> 1.05 </td> <td> 0.32 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 209154_at </td> <td> 209154_at </td> <td> AF234997 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF234997.1 /DEF=Homo sapiens glutaminase-interacting protein 3 mRNA, complete cds. /FEA=mRNA /PROD=glutaminase-interacting protein 3 /DB_XREF=gi:12005281 /UG=Hs.12956 Tax interaction protein 1 /FL=gb:AF028823.2 gb:NM_014604.1 gb:AF234997.1 </td> <td> AF234997 </td> <td> P2RX5-TAX1BP3 readthrough (NMD candidate) /// Tax1 (human T-cell leukemia virus type I) binding protein 3 </td> <td> P2RX5-TAX1BP3 /// TAX1BP3 </td> <td> 30851 /// 100533970 </td> <td> NM_001204698 /// NM_014604 /// NR_037928 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from direct assay /// 0007399 // nervous system development // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // non-traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030111 // regulation of Wnt signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0032864 // activation of Cdc42 GTPase activity // inferred from direct assay /// 0034220 // ion transmembrane transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0035590 // purinergic nucleotide receptor signaling pathway // inferred from electronic annotation /// 0035590 // purinergic nucleotide receptor signaling pathway // non-traceable author statement /// 0050850 // positive regulation of calcium-mediated signaling // non-traceable author statement /// 2000009 // negative regulation of protein localization to cell surface // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005639 // integral component of nuclear inner membrane //  /// 0005737 // cytoplasm // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001614 // purinergic nucleotide receptor activity // inferred from electronic annotation /// 0001614 // purinergic nucleotide receptor activity // non-traceable author statement /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004931 // extracellular ATP-gated cation channel activity // non-traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction </td> <td> 56.62 </td> <td> 1117.19 </td> <td> 1.05 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 220658_s_at </td> <td> 220658_s_at </td> <td> NM_020183 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020183.1 /DEF=Homo sapiens transcription factor BMAL2 (LOC56938), mRNA. /FEA=mRNA /GEN=LOC56938 /PROD=transcription factor BMAL2 /DB_XREF=gi:9910367 /UG=Hs.222024 transcription factor BMAL2 /FL=gb:AB039921.1 gb:NM_020183.1 </td> <td> NM_020183 </td> <td> aryl hydrocarbon receptor nuclear translocator-like 2 </td> <td> ARNTL2 </td> <td> 56938 </td> <td> NM_001248002 /// NM_001248003 /// NM_001248004 /// NM_001248005 /// NM_020183 /// XM_006719112 /// XM_006719113 /// XM_006719114 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from direct assay /// 0009649 // entrainment of circadian clock // non-traceable author statement /// 0042753 // positive regulation of circadian rhythm // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000982 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from direct assay </td> <td> -17.08 </td> <td> 114.29 </td> <td> -1.05 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200663_at </td> <td> 200663_at </td> <td> NM_001780 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001780.1 /DEF=Homo sapiens CD63 antigen (melanoma 1 antigen) (CD63), mRNA. /FEA=mRNA /GEN=CD63 /PROD=CD63 antigen (melanoma 1 antigen) /DB_XREF=gi:4502678 /UG=Hs.76294 CD63 antigen (melanoma 1 antigen) /FL=gb:BC002349.1 gb:M59907.1 gb:NM_001780.1 </td> <td> NM_001780 </td> <td> CD63 molecule </td> <td> CD63 </td> <td> 967 </td> <td> NM_001040034 /// NM_001257389 /// NM_001257390 /// NM_001257391 /// NM_001257392 /// NM_001257400 /// NM_001257401 /// NM_001267698 /// NM_001780 </td> <td> 0002092 // positive regulation of receptor internalization // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0034613 // cellular protein localization // inferred from direct assay /// 0035646 // endosome to melanosome transport // inferred from mutant phenotype /// 0048757 // pigment granule maturation // inferred from mutant phenotype /// 1900746 // regulation of vascular endothelial growth factor signaling pathway // inferred from mutant phenotype /// 2000680 // regulation of rubidium ion transport // inferred from direct assay /// 2001046 // positive regulation of integrin-mediated signaling pathway // inferred from mutant phenotype </td> <td> 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // traceable author statement /// 0031226 // intrinsic component of plasma membrane // inferred from direct assay /// 0031902 // late endosome membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097487 // multivesicular body, internal vesicle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -113.72 </td> <td> 1838.29 </td> <td> -1.05 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 212335_at </td> <td> 212335_at </td> <td> AW167793 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW167793 /FEA=EST /DB_XREF=gi:6399401 /DB_XREF=est:xg56d07.x1 /CLONE=IMAGE:2632333 /UG=Hs.164036 Homo sapiens AKAP350C mRNA sequence, alternatively spliced </td> <td> AW167793 </td> <td> glucosamine (N-acetyl)-6-sulfatase </td> <td> GNS </td> <td> 2799 </td> <td> NM_002076 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006027 // glycosaminoglycan catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0042339 // keratan sulfate metabolic process // traceable author statement /// 0042340 // keratan sulfate catabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005764 // lysosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -27.25 </td> <td> 308.88 </td> <td> -1.05 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 218660_at </td> <td> 218660_at </td> <td> NM_003494 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003494.1 /DEF=Homo sapiens dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) (DYSF), mRNA.  /FEA=mRNA /GEN=DYSF /PROD=dysferlin /DB_XREF=gi:4503430 /UG=Hs.143897 dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) /FL=gb:AF075575.1 gb:NM_003494.1 </td> <td> NM_003494 </td> <td> dysferlin </td> <td> DYSF </td> <td> 8291 </td> <td> NM_001130455 /// NM_001130976 /// NM_001130977 /// NM_001130978 /// NM_001130979 /// NM_001130980 /// NM_001130981 /// NM_001130982 /// NM_001130983 /// NM_001130984 /// NM_001130985 /// NM_001130986 /// NM_001130987 /// NM_003494 /// XM_005264584 /// XM_005264585 </td> <td> 0001778 // plasma membrane repair // inferred from electronic annotation /// 0006906 // vesicle fusion // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030315 // T-tubule // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from direct assay /// 0005544 // calcium-dependent phospholipid binding // inferred from mutant phenotype /// 0008289 // lipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 20.17 </td> <td> 281.49 </td> <td> 1.05 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202041_s_at </td> <td> 202041_s_at </td> <td> NM_004214 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004214.3 /DEF=Homo sapiens fibroblast growth factor (acidic) intracellular binding protein (FIBP), mRNA.  /FEA=mRNA /GEN=FIBP /PROD=fibroblast growth factor (acidic) intracellularbinding protein /DB_XREF=gi:7262377 /UG=Hs.7768 fibroblast growth factor (acidic) intracellular binding protein /FL=gb:AF171944.1 gb:AF171945.1 gb:AF171946.1 gb:AF010187.2 gb:NM_004214.3 </td> <td> NM_004214 </td> <td> fibroblast growth factor (acidic) intracellular binding protein </td> <td> FIBP </td> <td> 9158 </td> <td> NM_004214 /// NM_198897 /// XM_005274391 /// XM_005274392 </td> <td> 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0017134 // fibroblast growth factor binding // inferred from physical interaction </td> <td> 29.63 </td> <td> 325.16 </td> <td> 1.05 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200712_s_at </td> <td> 200712_s_at </td> <td> AI633566 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI633566 /FEA=EST /DB_XREF=gi:4684896 /DB_XREF=est:th68f09.x1 /CLONE=IMAGE:2123849 /UG=Hs.234279 microtubule-associated protein, RPEB family, member 1 /FL=gb:NM_012325.1 gb:U24166.1 </td> <td> AI633566 </td> <td> microtubule-associated protein, RP/EB family, member 1 </td> <td> MAPRE1 </td> <td> 22919 </td> <td> NM_012325 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0031113 // regulation of microtubule polymerization // inferred from electronic annotation /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0035372 // protein localization to microtubule // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0030981 // cortical microtubule cytoskeleton // inferred from direct assay /// 0031253 // cell projection membrane // inferred from electronic annotation /// 0035371 // microtubule plus-end // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051010 // microtubule plus-end binding // inferred from direct assay </td> <td> -27.90 </td> <td> 234.22 </td> <td> -1.05 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 211025_x_at </td> <td> 211025_x_at </td> <td> BC006229 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006229.1 /DEF=Homo sapiens, cytochrome c oxidase subunit Vb, clone MGC:10622, mRNA, complete cds.  /FEA=mRNA /PROD=cytochrome c oxidase subunit Vb /DB_XREF=gi:13623258 /FL=gb:BC006229.1 </td> <td> BC006229 </td> <td> cytochrome c oxidase subunit Vb </td> <td> COX5B </td> <td> 1329 </td> <td> NM_001862 </td> <td> 0007585 // respiratory gaseous exchange // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -24.45 </td> <td> 278.05 </td> <td> -1.05 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 217848_s_at </td> <td> 217848_s_at </td> <td> NM_021129 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021129.1 /DEF=Homo sapiens pyrophosphatase (inorganic) (PP), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=PP /PROD=pyrophosphatase (inorganic) /DB_XREF=gi:11056043 /UG=Hs.184011 pyrophosphatase (inorganic) /FL=gb:NM_021129.1 gb:AF217186.1 gb:BC001022.1 gb:AF154065.1 gb:AB026723.1 gb:AF119665.1 </td> <td> NM_021129 </td> <td> pyrophosphatase (inorganic) 1 </td> <td> PPA1 </td> <td> 5464 </td> <td> NM_021129 </td> <td> 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006796 // phosphate-containing compound metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0071344 // diphosphate metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004427 // inorganic diphosphatase activity // not recorded /// 0016462 // pyrophosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -118.10 </td> <td> 596.85 </td> <td> -1.05 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 207714_s_at </td> <td> 207714_s_at </td> <td> NM_004353 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004353.1 /DEF=Homo sapiens serine (or cysteine) proteinase inhibitor, clade H (heat shock protein 47), member 1 (SERPINH1), mRNA.  /FEA=mRNA /GEN=SERPINH1 /PROD=serine (or cysteine) proteinase inhibitor, cladeH (heat shock protein 47), member 1 /DB_XREF=gi:4757923 /UG=Hs.241579 serine (or cysteine) proteinase inhibitor, clade H (heat shock protein 47), member 1 /FL=gb:NM_004353.1 </td> <td> NM_004353 </td> <td> serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) </td> <td> SERPINH1 </td> <td> 871 </td> <td> NM_001207014 /// NM_001235 /// XM_006718727 /// XM_006718728 /// XM_006718729 </td> <td> 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030162 // regulation of proteolysis // not recorded /// 0030198 // extracellular matrix organization // traceable author statement /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0032964 // collagen biosynthetic process // inferred from electronic annotation /// 0051604 // protein maturation // inferred from electronic annotation </td> <td> 0005581 // collagen trimer // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0005518 // collagen binding // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -29.65 </td> <td> 743.98 </td> <td> -1.05 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 220605_s_at </td> <td> 220605_s_at </td> <td> NM_012237 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012237.2 /DEF=Homo sapiens sirtuin (silent mating type information regulation 2, S.cerevisiae, homolog) 2 (SIRT2), transcript variant 1, mRNA.  /FEA=mRNA /GEN=SIRT2 /PROD=sirtuin 2, isoform 1 /DB_XREF=gi:13775599 /UG=Hs.44017 sirtuin (silent mating type information regulation 2, S.cerevisiae, homolog) 2 /FL=gb:AF083107.2 gb:NM_012237.2 </td> <td> NM_012237 </td> <td> sirtuin 2 </td> <td> SIRT2 </td> <td> 22933 </td> <td> NM_001193286 /// NM_012237 /// NM_030593 /// NR_034146 /// XM_006723111 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000183 // chromatin silencing at rDNA // non-traceable author statement /// 0002376 // immune system process // inferred from electronic annotation /// 0006342 // chromatin silencing // non-traceable author statement /// 0006348 // chromatin silencing at telomere // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006471 // protein ADP-ribosylation // non-traceable author statement /// 0006471 // protein ADP-ribosylation // traceable author statement /// 0006476 // protein deacetylation // inferred from direct assay /// 0006476 // protein deacetylation // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007096 // regulation of exit from mitosis // non-traceable author statement /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0010507 // negative regulation of autophagy // inferred from mutant phenotype /// 0010801 // negative regulation of peptidyl-threonine phosphorylation // inferred from sequence or structural similarity /// 0014065 // phosphatidylinositol 3-kinase signaling // inferred from mutant phenotype /// 0016458 // gene silencing // non-traceable author statement /// 0016575 // histone deacetylation // inferred from direct assay /// 0016575 // histone deacetylation // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0022011 // myelination in peripheral nervous system // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031641 // regulation of myelination // inferred from sequence or structural similarity /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0034599 // cellular response to oxidative stress // inferred from sequence or structural similarity /// 0034983 // peptidyl-lysine deacetylation // inferred from direct assay /// 0035729 // cellular response to hepatocyte growth factor stimulus // inferred from direct assay /// 0042177 // negative regulation of protein catabolic process // inferred from mutant phenotype /// 0042325 // regulation of phosphorylation // non-traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0043388 // positive regulation of DNA binding // inferred from sequence or structural similarity /// 0043491 // protein kinase B signaling // inferred from mutant phenotype /// 0044242 // cellular lipid catabolic process // inferred from sequence or structural similarity /// 0045087 // innate immune response // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045836 // positive regulation of meiosis // inferred from sequence or structural similarity /// 0045843 // negative regulation of striated muscle tissue development // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from mutant phenotype /// 0051775 // response to redox state // non-traceable author statement /// 0051781 // positive regulation of cell division // inferred from sequence or structural similarity /// 0051987 // positive regulation of attachment of spindle microtubules to kinetochore // inferred from sequence or structural similarity /// 0061428 // negative regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from mutant phenotype /// 0061433 // cellular response to caloric restriction // inferred from sequence or structural similarity /// 0070446 // negative regulation of oligodendrocyte progenitor proliferation // inferred from sequence or structural similarity /// 0070932 // histone H3 deacetylation // inferred from mutant phenotype /// 0070933 // histone H4 deacetylation // inferred from direct assay /// 0071219 // cellular response to molecule of bacterial origin // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071872 // cellular response to epinephrine stimulus // inferred from sequence or structural similarity /// 0090042 // tubulin deacetylation // inferred from direct assay /// 0090042 // tubulin deacetylation // inferred from mutant phenotype /// 0090042 // tubulin deacetylation // inferred from sequence or structural similarity /// 1900119 // positive regulation of execution phase of apoptosis // inferred from sequence or structural similarity /// 1900195 // positive regulation of oocyte maturation // inferred from sequence or structural similarity /// 1900425 // negative regulation of defense response to bacterium // inferred from mutant phenotype /// 2000378 // negative regulation of reactive oxygen species metabolic process // inferred from sequence or structural similarity /// 2000777 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005677 // chromatin silencing complex // non-traceable author statement /// 0005694 // chromosome // inferred from direct assay /// 0005720 // nuclear heterochromatin // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0033010 // paranodal junction // inferred from sequence or structural similarity /// 0033270 // paranode region of axon // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0043204 // perikaryon // inferred from sequence or structural similarity /// 0043209 // myelin sheath // inferred from sequence or structural similarity /// 0043219 // lateral loop // inferred from sequence or structural similarity /// 0043220 // Schmidt-Lanterman incisure // inferred from sequence or structural similarity /// 0044224 // juxtaparanode region of axon // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0072686 // mitotic spindle // inferred from direct assay /// 0072687 // meiotic spindle // inferred from sequence or structural similarity /// 0097386 // glial cell projection // inferred from sequence or structural similarity </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0004407 // histone deacetylase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides // inferred from electronic annotation /// 0017136 // NAD-dependent histone deacetylase activity // inferred from direct assay /// 0033558 // protein deacetylase activity // inferred from direct assay /// 0033558 // protein deacetylase activity // inferred from mutant phenotype /// 0034979 // NAD-dependent protein deacetylase activity // inferred from direct assay /// 0034979 // NAD-dependent protein deacetylase activity // inferred from mutant phenotype /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0042903 // tubulin deacetylase activity // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from direct assay /// 0051287 // NAD binding // inferred from electronic annotation /// 0070403 // NAD+ binding // inferred from direct assay </td> <td> 23.82 </td> <td> 159.89 </td> <td> 1.05 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 214035_x_at </td> <td> 214035_x_at </td> <td> AA308853 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA308853 /FEA=EST /DB_XREF=gi:1961191 /DB_XREF=est:EST179659 /UG=Hs.251928 nuclear pore complex interacting protein </td> <td> AA308853 </td> <td> GPS, PLAT and transmembrane domain-containing protein </td> <td> LOC399491 </td> <td> 399491 </td> <td> XR_248294 /// XR_430728 /// XR_433252 </td> <td> 0001502 // cartilage condensation // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from sequence or structural similarity /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007156 // homophilic cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007161 // calcium-independent cell-matrix adhesion // traceable author statement /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from expression pattern /// 0021915 // neural tube development // inferred from expression pattern /// 0031659 // positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from sequence or structural similarity /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from electronic annotation /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from sequence or structural similarity /// 0043588 // skin development // inferred from expression pattern /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048565 // digestive tract development // inferred from expression pattern /// 0048754 // branching morphogenesis of an epithelial tube // inferred from direct assay /// 0048806 // genitalia development // inferred from expression pattern /// 0050982 // detection of mechanical stimulus //  /// 0050982 // detection of mechanical stimulus // inferred from electronic annotation /// 0050982 // detection of mechanical stimulus // inferred from sequence or structural similarity /// 0051216 // cartilage development // inferred from expression pattern /// 0060236 // regulation of mitotic spindle organization // inferred from electronic annotation /// 0060428 // lung epithelium development // inferred from expression pattern /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0060674 // placenta blood vessel development // inferred from sequence or structural similarity /// 0061136 // regulation of proteasomal protein catabolic process // inferred from direct assay /// 0070588 // calcium ion transmembrane transport //  /// 0072001 // renal system development // inferred from electronic annotation /// 0072164 // mesonephric tubule development // inferred from expression pattern /// 0072177 // mesonephric duct development // inferred from expression pattern /// 0072205 // metanephric collecting duct development // inferred from expression pattern /// 0072218 // metanephric ascending thin limb development // inferred from expression pattern /// 0072237 // metanephric proximal tubule development // inferred from expression pattern /// 0072287 // metanephric distal tubule morphogenesis // inferred from expression pattern </td> <td> 0002133 // polycystin complex // inferred from electronic annotation /// 0002133 // polycystin complex // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005261 // cation channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from sequence or structural similarity /// 0005262 // calcium channel activity //  /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction </td> <td> -68.93 </td> <td> 383.24 </td> <td> -1.05 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201646_at </td> <td> 201646_at </td> <td> AA885297 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA885297 /FEA=EST /DB_XREF=gi:2994374 /DB_XREF=est:al58h03.s1 /CLONE=IMAGE:1461557 /UG=Hs.323567 CD36 antigen (collagen type I receptor, thrombospondin receptor)-like 2 (lysosomal integral membrane protein II) /FL=gb:D12676.1 gb:NM_005506.1 </td> <td> AA885297 </td> <td> scavenger receptor class B, member 2 </td> <td> SCARB2 </td> <td> 950 </td> <td> NM_001204255 /// NM_005506 </td> <td> 0006622 // protein targeting to lysosome // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation </td> <td> 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> -41.55 </td> <td> 226.55 </td> <td> -1.05 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 214749_s_at </td> <td> 214749_s_at </td> <td> AK000818 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK000818.1 /DEF=Homo sapiens cDNA FLJ20811 fis, clone ADSE01435. /FEA=mRNA /DB_XREF=gi:7021128 /UG=Hs.83530 hypothetical protein </td> <td> AK000818 </td> <td> armadillo repeat containing, X-linked 6 </td> <td> ARMCX6 </td> <td> 54470 </td> <td> NM_001009584 /// NM_001184768 /// NM_019007 /// NR_033669 /// NR_033670 /// XM_006724665 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016082 // synaptic vesicle priming // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0008289 // lipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 56.88 </td> <td> 604.79 </td> <td> 1.04 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 204173_at </td> <td> 204173_at </td> <td> NM_002475 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002475.1 /DEF=Homo sapiens myosin, light polypeptide 1, alkali; skeletal, fast (MYL1), mRNA.  /FEA=mRNA /GEN=MYL1 /PROD=myosin, light polypeptide 1, alkali; skeletal,fast /DB_XREF=gi:4505302 /UG=Hs.90318 myosin, light polypeptide 1, alkali; skeletal, fast /FL=gb:M31211.1 gb:NM_002475.1 </td> <td> NM_002475 </td> <td> myosin, light chain 6B, alkali, smooth muscle and non-muscle </td> <td> MYL6B </td> <td> 140465 </td> <td> NM_001199629 /// NM_002475 </td> <td> 0006936 // muscle contraction // traceable author statement /// 0007519 // skeletal muscle tissue development // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0030049 // muscle filament sliding // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005859 // muscle myosin complex // traceable author statement /// 0016459 // myosin complex // traceable author statement /// 0016461 // unconventional myosin complex // traceable author statement </td> <td> 0003774 // motor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // traceable author statement </td> <td> -24.50 </td> <td> 274.82 </td> <td> -1.04 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 204313_s_at </td> <td> 204313_s_at </td> <td> AA161486 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA161486 /FEA=EST /DB_XREF=gi:1735796 /DB_XREF=est:zq42d09.s1 /CLONE=IMAGE:632369 /UG=Hs.79194 cAMP responsive element binding protein 1 /FL=gb:M27691.1 gb:NM_004379.1 </td> <td> AA161486 </td> <td> cAMP responsive element binding protein 1 </td> <td> CREB1 </td> <td> 1385 </td> <td> NM_004379 /// NM_134442 /// XR_241289 /// XR_241290 /// XR_241292 /// XR_427071 </td> <td> 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007595 // lactation // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010033 // response to organic substance // inferred from direct assay /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0033363 // secretory granule organization // inferred from electronic annotation /// 0033762 // response to glucagon // inferred from sequence or structural similarity /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045600 // positive regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0046889 // positive regulation of lipid biosynthetic process // inferred from sequence or structural similarity /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060428 // lung epithelium development // inferred from electronic annotation /// 0060430 // lung saccule development // inferred from electronic annotation /// 0060509 // Type I pneumocyte differentiation // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred by curator /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -19.00 </td> <td> 117.02 </td> <td> -1.04 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 215936_s_at </td> <td> 215936_s_at </td> <td> AK001657 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001657.1 /DEF=Homo sapiens cDNA FLJ10795 fis, clone NT2RP4000638. /FEA=mRNA /DB_XREF=gi:7023048 /UG=Hs.12144 KIAA1033 protein </td> <td> AK001657 </td> <td> KIAA1033 </td> <td> KIAA1033 </td> <td> 23325 </td> <td> NM_001293640 /// NM_015275 /// XM_005268742 /// XM_005268743 /// XM_005268744 /// XM_005268745 /// XM_005268746 /// XR_245916 </td> <td> 0016197 // endosomal transport // inferred from mutant phenotype /// 0016197 // endosomal transport // inferred from sequence or structural similarity </td> <td> 0005768 // endosome // inferred from direct assay /// 0071203 // WASH complex // inferred from direct assay </td> <td>  </td> <td> 29.17 </td> <td> 136.09 </td> <td> 1.04 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 217142_at </td> <td> 217142_at </td> <td> AL035687 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL035687 /DEF=Human DNA sequence from clone RP1-142O9 on chromosome 6p11.1-12.3. Contains an EEF1A1 (eukaryotic translation elongation factor 1 alpha 1) pseudogene, a pseudogene similar to part of ZNF216, ESTs, STSs, GSSs and an aat repeat polymorphism /FEA=CDS /DB_XREF=gi:5295830 /UG=Hs.247893 Human DNA sequence from clone RP1-142O9 on chromosome 6p11.1-12.3. Contains an EEF1A1 (eukaryotic translation elongation factor 1 alpha 1) pseudogene, a pseudogene similar to part of ZNF216, ESTs, STSs, GSSs and an aat repeat polymorphism </td> <td> AL035687 </td> <td>  </td> <td> EEF1A1P42 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 14.98 </td> <td> 89.79 </td> <td> 1.04 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 203390_s_at </td> <td> 203390_s_at </td> <td> NM_002254 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002254.1 /DEF=Homo sapiens kinesin family member 3C (KIF3C), mRNA. /FEA=mRNA /GEN=KIF3C /PROD=kinesin family member 3C /DB_XREF=gi:4504868 /UG=Hs.21611 kinesin family member 3C /FL=gb:AF018164.1 gb:AF035621.1 gb:NM_002254.1 </td> <td> NM_002254 </td> <td> kinesin family member 3C </td> <td> KIF3C </td> <td> 3797 </td> <td> NM_002254 /// XM_005264299 </td> <td> 0007018 // microtubule-based movement // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // traceable author statement /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation </td> <td> -24.82 </td> <td> 157.31 </td> <td> -1.04 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 222297_x_at </td> <td> 222297_x_at </td> <td> AV738806 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV738806 /FEA=EST /DB_XREF=gi:10856387 /DB_XREF=est:AV738806 /CLONE=CBCAWB04 /UG=Hs.317387 ESTs, Weakly similar to RL18_HUMAN 60S RIBOSOMAL PROTEIN L1 H.sapiens </td> <td> AV738806 </td> <td> ribosomal protein L18 pseudogene 10 /// </td> <td> RPL18P10 /// RPL18P10 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 22.80 </td> <td> 84.78 </td> <td> 1.04 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 207974_s_at </td> <td> 207974_s_at </td> <td> NM_006930 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006930.1 /DEF=Homo sapiens S-phase kinase-associated protein 1A (p19A) (SKP1A), mRNA.  /FEA=mRNA /GEN=SKP1A /PROD=S-phase kinase-associated protein 1A (p19A) /DB_XREF=gi:5902087 /UG=Hs.227950 S-phase kinase-associated protein 1A (p19A) /FL=gb:NM_006930.1 gb:U33760.1 </td> <td> NM_006930 </td> <td> S-phase kinase-associated protein 1 </td> <td> SKP1 </td> <td> 6500 </td> <td> NM_006930 /// NM_170679 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0031467 // Cul7-RING ubiquitin ligase complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 45.77 </td> <td> 838.96 </td> <td> 1.04 </td> <td> 0.33 </td> <td> 0.41 </td> <td> -4.59 </td> </tr>
  <tr> <td> 215693_x_at </td> <td> 215693_x_at </td> <td> AL512707 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL512707.1 /DEF=Homo sapiens mRNA; cDNA DKFZp667N057 (from clone DKFZp667N057). /FEA=mRNA /DB_XREF=gi:12224949 /UG=Hs.65234 hypothetical protein FLJ20596 </td> <td> AL512707 </td> <td> DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 </td> <td> DDX27 </td> <td> 55661 </td> <td> NM_017895 /// XM_006723815 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -26.98 </td> <td> 172.96 </td> <td> -1.03 </td> <td> 0.33 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 208912_s_at </td> <td> 208912_s_at </td> <td> BC001362 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001362.1 /DEF=Homo sapiens, 2,3-cyclic nucleotide 3 phosphodiesterase, clone MGC:2262, mRNA, complete cds.  /FEA=mRNA /PROD=2,3-cyclic nucleotide 3 phosphodiesterase /DB_XREF=gi:12655028 /UG=Hs.150741 2,3-cyclic nucleotide 3 phosphodiesterase /FL=gb:BC001362.1 gb:M19650.1 </td> <td> BC001362 </td> <td> 2',3'-cyclic nucleotide 3' phosphodiesterase </td> <td> CNP </td> <td> 1267 </td> <td> NM_033133 /// XM_006721701 /// XM_006721702 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0009214 // cyclic nucleotide catabolic process // inferred from electronic annotation /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0030900 // forebrain development // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031143 // pseudopodium // inferred from electronic annotation /// 0035748 // myelin sheath abaxonal region // inferred from electronic annotation /// 0035749 // myelin sheath adaxonal region // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004113 // 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030551 // cyclic nucleotide binding // inferred from electronic annotation </td> <td> 29.50 </td> <td> 198.93 </td> <td> 1.03 </td> <td> 0.33 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201189_s_at </td> <td> 201189_s_at </td> <td> NM_002224 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002224.1 /DEF=Homo sapiens inositol 1,4,5-triphosphate receptor, type 3 (ITPR3), mRNA.  /FEA=mRNA /GEN=ITPR3 /PROD=inositol 1,4,5-triphosphate receptor, type 3 /DB_XREF=gi:4504794 /UG=Hs.77515 inositol 1,4,5-triphosphate receptor, type 3 /FL=gb:D26351.1 gb:NM_002224.1 gb:U01062.1 </td> <td> NM_002224 </td> <td> inositol 1,4,5-trisphosphate receptor, type 3 </td> <td> ITPR3 </td> <td> 3710 </td> <td> NM_002224 /// XM_006715091 /// XM_006715092 /// XM_006715093 </td> <td> 0002082 // regulation of oxidative phosphorylation // inferred from mutant phenotype /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0007613 // memory // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048016 // inositol phosphate-mediated signaling // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050913 // sensory perception of bitter taste // inferred from electronic annotation /// 0050916 // sensory perception of sweet taste // inferred from electronic annotation /// 0050917 // sensory perception of umami taste // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from sequence or structural similarity /// 0051291 // protein heterooligomerization // inferred from sequence or structural similarity /// 0051592 // response to calcium ion // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0060402 // calcium ion transport into cytosol // inferred from sequence or structural similarity /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 2001014 // regulation of skeletal muscle cell differentiation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005640 // nuclear outer membrane // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005903 // brush border // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031095 // platelet dense tubular network membrane // traceable author statement /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043209 // myelin sheath // inferred from sequence or structural similarity /// 0043235 // receptor complex // inferred from direct assay /// 0045177 // apical part of cell // inferred from sequence or structural similarity </td> <td> 0000822 // inositol hexakisphosphate binding // inferred from sequence or structural similarity /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005218 // intracellular ligand-gated calcium channel activity // inferred from sequence or structural similarity /// 0005220 // inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from direct assay /// 0005220 // inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0043533 // inositol 1,3,4,5 tetrakisphosphate binding // inferred from sequence or structural similarity /// 0070679 // inositol 1,4,5 trisphosphate binding // inferred from direct assay </td> <td> -17.65 </td> <td> 158.12 </td> <td> -1.03 </td> <td> 0.33 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 213757_at </td> <td> 213757_at </td> <td> AA393940 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA393940 /FEA=EST /DB_XREF=gi:2046909 /DB_XREF=est:zv64f10.r1 /CLONE=IMAGE:758443 /UG=Hs.119140 eukaryotic translation initiation factor 5A </td> <td> AA393940 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -178.20 </td> <td> 683.77 </td> <td> -1.03 </td> <td> 0.33 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 206055_s_at </td> <td> 206055_s_at </td> <td> NM_003090 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003090.1 /DEF=Homo sapiens small nuclear ribonucleoprotein polypeptide A (SNRPA1), mRNA.  /FEA=mRNA /GEN=SNRPA1 /PROD=small nuclear ribonucleoprotein polypeptide A /DB_XREF=gi:4507120 /UG=Hs.80506 small nuclear ribonucleoprotein polypeptide A /FL=gb:NM_003090.1 </td> <td> NM_003090 </td> <td> small nuclear ribonucleoprotein polypeptide A' </td> <td> SNRPA1 </td> <td> 6627 </td> <td> NM_003090 /// XR_243213 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005686 // U2 snRNP // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 27.05 </td> <td> 235.57 </td> <td> 1.03 </td> <td> 0.33 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 220617_s_at </td> <td> 220617_s_at </td> <td> NM_018181 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018181.1 /DEF=Homo sapiens hypothetical protein FLJ10697 (FLJ10697), mRNA. /FEA=mRNA /GEN=FLJ10697 /PROD=hypothetical protein FLJ10697 /DB_XREF=gi:8922593 /UG=Hs.104557 hypothetical protein FLJ10697 /FL=gb:NM_018181.1 </td> <td> NM_018181 </td> <td> zinc finger protein 532 </td> <td> ZNF532 </td> <td> 55205 </td> <td> NM_018181 /// XM_005266722 /// XM_005266723 /// XM_005266724 /// XM_006722495 /// XM_006722496 /// XM_006722497 /// XM_006722498 /// XM_006722499 /// XR_430077 /// XR_430078 /// XR_430079 /// XR_430080 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -16.70 </td> <td> 118.20 </td> <td> -1.03 </td> <td> 0.33 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202429_s_at </td> <td> 202429_s_at </td> <td> AL353950 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL353950.1 /DEF=Homo sapiens mRNA; cDNA DKFZp761L0516 (from clone DKFZp761L0516); complete cds.  /FEA=mRNA /GEN=DKFZp761L0516 /PROD=hypothetical protein /DB_XREF=gi:7669991 /UG=Hs.272458 protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (calcineurin A alpha) /FL=gb:J05480.1 gb:L14778.1 gb:NM_000944.1 gb:AL353950.1 </td> <td> AL353950 </td> <td> protein phosphatase 3, catalytic subunit, alpha isozyme </td> <td> PPP3CA </td> <td> 5530 </td> <td> NM_000944 /// NM_001130691 /// NM_001130692 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0001915 // negative regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // non-traceable author statement /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0014883 // transition between fast and slow fiber // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0033173 // calcineurin-NFAT signaling cascade // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from direct assay /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042110 // T cell activation // traceable author statement /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005955 // calcineurin complex // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // non-traceable author statement /// 0004723 // calcium-dependent protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // non-traceable author statement /// 0008144 // drug binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from physical interaction </td> <td> -18.45 </td> <td> 197.03 </td> <td> -1.03 </td> <td> 0.34 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201851_at </td> <td> 201851_at </td> <td> NM_003025 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003025.1 /DEF=Homo sapiens SH3-domain GRB2-like 1 (SH3GL1), mRNA. /FEA=mRNA /GEN=SH3GL1 /PROD=SH3-domain GRB2-like 1 /DB_XREF=gi:4506928 /UG=Hs.97616 SH3-domain GRB2-like 1 /FL=gb:BC001270.1 gb:U65999.1 gb:NM_003025.1 </td> <td> NM_003025 </td> <td> SH3-domain GRB2-like 1 </td> <td> SH3GL1 </td> <td> 6455 </td> <td> NM_001199943 /// NM_001199944 /// NM_003025 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0002102 // podosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051020 // GTPase binding // inferred from electronic annotation </td> <td> 19.15 </td> <td> 229.20 </td> <td> 1.03 </td> <td> 0.34 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202913_at </td> <td> 202913_at </td> <td> AI090007 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI090007 /FEA=EST /DB_XREF=gi:3429066 /DB_XREF=est:qb13h01.x1 /CLONE=IMAGE:1696177 /UG=Hs.47822 Rho guanine exchange factor (GEF) 11 /FL=gb:AB002378.1 gb:NM_014784.1 </td> <td> AI090007 </td> <td> Rho guanine nucleotide exchange factor (GEF) 11 </td> <td> ARHGEF11 </td> <td> 9826 </td> <td> NM_014784 /// NM_198236 /// XM_005245629 /// XM_005245633 /// XM_006711659 /// XM_006711660 /// XM_006711661 /// XM_006711662 /// XM_006711663 /// XM_006711664 /// XM_006711665 </td> <td> 0000910 // cytokinesis // non-traceable author statement /// 0001558 // regulation of cell growth // non-traceable author statement /// 0006928 // cellular component movement // non-traceable author statement /// 0006941 // striated muscle contraction // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from direct assay /// 0007411 // axon guidance // traceable author statement /// 0030010 // establishment of cell polarity // non-traceable author statement /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005622 // intracellular // inferred by curator /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0001664 // G-protein coupled receptor binding // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 16.57 </td> <td> 72.06 </td> <td> 1.03 </td> <td> 0.34 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 203593_at </td> <td> 203593_at </td> <td> NM_012120 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012120.1 /DEF=Homo sapiens CD2-associated protein (CD2AP), mRNA. /FEA=mRNA /GEN=CD2AP /PROD=CD2-associated protein /DB_XREF=gi:11321633 /UG=Hs.265561 CD2-associated protein /FL=gb:NM_012120.1 gb:AF146277.1 gb:AF164377.1 </td> <td> NM_012120 </td> <td> CD2-associated protein </td> <td> CD2AP </td> <td> 23607 </td> <td> NM_012120 /// XM_005248976 /// XM_005248977 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0006930 // substrate-dependent cell migration, cell extension // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0016050 // vesicle organization // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0048259 // regulation of receptor-mediated endocytosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005172 // vascular endothelial growth factor receptor binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from electronic annotation </td> <td> -16.70 </td> <td> 140.95 </td> <td> -1.03 </td> <td> 0.34 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201608_s_at </td> <td> 201608_s_at </td> <td> NM_007062 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007062.1 /DEF=Homo sapiens nuclear phosphoprotein similar to S. cerevisiae PWP1 (PWP1), mRNA.  /FEA=mRNA /GEN=PWP1 /PROD=nuclear phosphoprotein similar to S. cerevisiaePWP1 /DB_XREF=gi:5902033 /UG=Hs.172589 nuclear phosphoprotein similar to S. cerevisiae PWP1 /FL=gb:BC001652.1 gb:L07758.1 gb:NM_007062.1 </td> <td> NM_007062 </td> <td> PWP1 homolog (S. cerevisiae) </td> <td> PWP1 </td> <td> 11137 </td> <td> NM_007062 </td> <td> 0006351 // transcription, DNA-templated // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 41.55 </td> <td> 425.85 </td> <td> 1.03 </td> <td> 0.34 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 210665_at </td> <td> 210665_at </td> <td> AF021834 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF021834.1 /DEF=Homo sapiens tissue factor pathway inhibitor beta (TFPIbeta) mRNA, complete cds.  /FEA=mRNA /GEN=TFPIbeta /PROD=tissue factor pathway inhibitor beta /DB_XREF=gi:4103170 /UG=Hs.170279 tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) /FL=gb:AF021834.1 </td> <td> AF021834 </td> <td> tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) </td> <td> TFPI </td> <td> 7035 </td> <td> NM_001032281 /// NM_006287 /// XM_005246818 /// XM_005246819 /// XM_005246820 /// XM_006712720 </td> <td> 0007596 // blood coagulation // traceable author statement /// 0007598 // blood coagulation, extrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> 18.32 </td> <td> 114.34 </td> <td> 1.03 </td> <td> 0.34 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201100_s_at </td> <td> 201100_s_at </td> <td> NM_004652 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004652.2 /DEF=Homo sapiens ubiquitin specific protease 9, X chromosome (Drosophila fat facets related) (USP9X), transcript variant 1, mRNA.  /FEA=mRNA /GEN=USP9X /PROD=Drosophila fat facets related, X-linked, isoform1 /DB_XREF=gi:11641424 /UG=Hs.77578 ubiquitin specific protease 9, X chromosome (Drosophila fat facets related) /FL=gb:NM_004652.2 </td> <td> NM_004652 </td> <td> ubiquitin specific peptidase 9, X-linked </td> <td> USP9X </td> <td> 8239 </td> <td> NM_001039590 /// NM_001039591 /// NM_004652 /// NM_021906 /// XM_005272675 /// XM_005272676 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001764 // neuron migration // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007292 // female gamete generation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016579 // protein deubiquitination // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0048675 // axon extension // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030426 // growth cone // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation </td> <td> 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation /// 0070410 // co-SMAD binding // inferred from physical interaction </td> <td> -39.12 </td> <td> 292.99 </td> <td> -1.03 </td> <td> 0.34 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 212120_at </td> <td> 212120_at </td> <td> BE897886 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE897886 /FEA=EST /DB_XREF=gi:10363799 /DB_XREF=est:601440558F1 /CLONE=IMAGE:3925214 /UG=Hs.166982 phosphatidylinositol glycan, class F </td> <td> BE897886 </td> <td> ras homolog family member Q </td> <td> RHOQ </td> <td> 23433 </td> <td> NM_012249 /// XM_005264229 </td> <td> 0006184 // GTP catabolic process // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030866 // cortical actin cytoskeleton organization // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032956 // regulation of actin cytoskeleton organization // inferred by curator /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051491 // positive regulation of filopodium assembly // inferred from direct assay /// 0090005 // negative regulation of establishment of protein localization to plasma membrane // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005884 // actin filament // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0005522 // profilin binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0032427 // GBD domain binding // inferred from physical interaction </td> <td> 18.17 </td> <td> 195.06 </td> <td> 1.03 </td> <td> 0.34 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 202012_s_at </td> <td> 202012_s_at </td> <td> AA196245 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA196245 /FEA=EST /DB_XREF=gi:1791879 /DB_XREF=est:zp92h05.s1 /CLONE=IMAGE:627705 /UG=Hs.75334 exostoses (multiple) 2 /FL=gb:U64511.1 gb:NM_000401.1 </td> <td> AA196245 </td> <td> exostosin glycosyltransferase 2 </td> <td> EXT2 </td> <td> 2132 </td> <td> NM_000401 /// NM_001178083 /// NM_207122 </td> <td> 0001503 // ossification // inferred from mutant phenotype /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006024 // glycosaminoglycan biosynthetic process // inferred from direct assay /// 0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from mutant phenotype /// 0015014 // heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0033692 // cellular polysaccharide biosynthetic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031227 // intrinsic component of endoplasmic reticulum membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008375 // acetylglucosaminyltransferase activity // inferred from direct assay /// 0015020 // glucuronosyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from direct assay /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0042328 // heparan sulfate N-acetylglucosaminyltransferase activity // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0050508 // glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0050509 // N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity // non-traceable author statement </td> <td> -42.55 </td> <td> 255.85 </td> <td> -1.03 </td> <td> 0.34 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 212396_s_at </td> <td> 212396_s_at </td> <td> AI143233 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI143233 /FEA=EST /DB_XREF=gi:3665042 /DB_XREF=est:qb76e09.x1 /CLONE=IMAGE:1706056 /UG=Hs.154797 KIAA0090 protein </td> <td> AI143233 </td> <td> ER membrane protein complex subunit 1 </td> <td> EMC1 </td> <td> 23065 </td> <td> NM_001271427 /// NM_001271428 /// NM_001271429 /// NM_015047 /// XM_005245787 /// XM_005245788 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0072546 // ER membrane protein complex // inferred from direct assay </td> <td>  </td> <td> -22.25 </td> <td> 162.65 </td> <td> -1.02 </td> <td> 0.34 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 212329_at </td> <td> 212329_at </td> <td> D83782 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D83782.1 /DEF=Human mRNA for KIAA0199 gene, partial cds. /FEA=mRNA /GEN=KIAA0199 /DB_XREF=gi:1228046 /UG=Hs.78442 SREBP CLEAVAGE-ACTIVATING PROTEIN </td> <td> D83782 </td> <td> SREBF chaperone </td> <td> SCAP </td> <td> 22937 </td> <td> NM_012235 /// XM_005264967 /// XM_005264968 /// XM_005264969 /// XM_005264970 /// XM_005264971 /// XM_005264972 /// XM_006713034 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0019217 // regulation of fatty acid metabolic process // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0032933 // SREBP signaling pathway // inferred from mutant phenotype /// 0042304 // regulation of fatty acid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045540 // regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0045541 // negative regulation of cholesterol biosynthetic process // non-traceable author statement /// 0045716 // positive regulation of low-density lipoprotein particle receptor biosynthetic process // non-traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // non-traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008158 // hedgehog receptor activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement </td> <td> 14.95 </td> <td> 98.88 </td> <td> 1.02 </td> <td> 0.34 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201042_at </td> <td> 201042_at </td> <td> AL031651 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL031651 /DEF=Human DNA sequence from clone RP5-1054A22 on chromosome 20q11.22-12 Contains two isoforms of the gene for TGM2 (transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase), ESTs, STSs, GSSs and a CpG island /FEA=mRNA_1 /DB_XREF=gi:6065866 /UG=Hs.8265 transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) /FL=gb:M55153.1 gb:NM_004613.1 </td> <td> AL031651 </td> <td> transglutaminase 2 </td> <td> TGM2 </td> <td> 7052 </td> <td> NM_004613 /// NM_198951 </td> <td> 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0018149 // peptide cross-linking // inferred from electronic annotation /// 0018153 // isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine // inferred from electronic annotation /// 0032471 // negative regulation of endoplasmic reticulum calcium ion concentration // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from sequence or structural similarity /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051482 // positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0051561 // positive regulation of mitochondrial calcium ion concentration // inferred from mutant phenotype /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060662 // salivary gland cavitation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from mutant phenotype /// 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -63.02 </td> <td> 705.84 </td> <td> -1.02 </td> <td> 0.34 </td> <td> 0.42 </td> <td> -4.59 </td> </tr>
  <tr> <td> 218047_at </td> <td> 218047_at </td> <td> NM_024586 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024586.1 /DEF=Homo sapiens hypothetical protein FLJ12492 (FLJ12492), mRNA. /FEA=mRNA /GEN=FLJ12492 /PROD=hypothetical protein FLJ12492 /DB_XREF=gi:13375771 /UG=Hs.21938 hypothetical protein FLJ12492 /FL=gb:NM_024586.1 </td> <td> NM_024586 </td> <td> oxysterol binding protein-like 9 </td> <td> OSBPL9 </td> <td> 114883 </td> <td> NM_024586 /// NM_148904 /// NM_148905 /// NM_148906 /// NM_148907 /// NM_148908 /// NM_148909 /// NR_036662 /// XM_006710318 /// XM_006710319 /// XM_006710320 /// XM_006710321 /// XM_006710322 /// XM_006710323 /// XM_006710324 /// XM_006710325 /// XM_006710326 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation </td> <td> 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation </td> <td> 21.40 </td> <td> 329.40 </td> <td> 1.02 </td> <td> 0.34 </td> <td> 0.43 </td> <td> -4.59 </td> </tr>
  <tr> <td> 201773_at </td> <td> 201773_at </td> <td> NM_015339 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015339.1 /DEF=Homo sapiens activity-dependent neuroprotective protein (ADNP), mRNA.  /FEA=mRNA /GEN=ADNP /PROD=activity-dependent neuroprotective protein /DB_XREF=gi:12229216 /UG=Hs.3657 activity-dependent neuroprotective protein /FL=gb:AF250860.1 gb:NM_015339.1 </td> <td> NM_015339 </td> <td> activity-dependent neuroprotector homeobox </td> <td> ADNP </td> <td> 23394 </td> <td> NM_001282531 /// NM_001282532 /// NM_015339 /// NM_181442 /// XM_006723759 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -34.40 </td> <td> 291.52 </td> <td> -1.02 </td> <td> 0.34 </td> <td> 0.43 </td> <td> -4.59 </td> </tr>
  <tr> <td> 200991_s_at </td> <td> 200991_s_at </td> <td> NM_014748 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014748.1 /DEF=Homo sapiens KIAA0064 gene product (KIAA0064), mRNA. /FEA=mRNA /GEN=KIAA0064 /PROD=KIAA0064 gene product /DB_XREF=gi:7661889 /UG=Hs.278569 sorting nexin 17 /FL=gb:BC002524.1 gb:BC002610.1 gb:D31764.1 gb:NM_014748.1 </td> <td> NM_014748 </td> <td> sorting nexin 17 </td> <td> SNX17 </td> <td> 9784 </td> <td> NM_001267059 /// NM_001267060 /// NM_001267061 /// NM_014748 /// NR_049782 /// NR_049783 /// NR_049784 /// NR_049785 /// NR_049786 /// NR_049787 /// NR_049788 /// XM_006712154 </td> <td> 0001525 // angiogenesis // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006707 // cholesterol catabolic process // inferred by curator /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0021545 // cranial nerve development // inferred from electronic annotation /// 0021631 // optic nerve morphogenesis // inferred from electronic annotation /// 0021952 // central nervous system projection neuron axonogenesis // inferred from electronic annotation /// 0021952 // central nervous system projection neuron axonogenesis // inferred from sequence or structural similarity /// 0022008 // neurogenesis // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from sequence or structural similarity /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from sequence or structural similarity /// 0030100 // regulation of endocytosis // non-traceable author statement /// 0031290 // retinal ganglion cell axon guidance // inferred from electronic annotation /// 0031290 // retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 0031589 // cell-substrate adhesion // inferred from direct assay /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0050965 // detection of temperature stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0050965 // detection of temperature stimulus involved in sensory perception of pain // inferred from sequence or structural similarity /// 0051965 // positive regulation of synapse assembly // inferred from electronic annotation /// 0051965 // positive regulation of synapse assembly // inferred from sequence or structural similarity /// 0060326 // cell chemotaxis // inferred from direct assay /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0060996 // dendritic spine development // inferred from electronic annotation /// 0060996 // dendritic spine development // inferred from sequence or structural similarity /// 0060997 // dendritic spine morphogenesis // inferred from electronic annotation /// 0060997 // dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061351 // neural precursor cell proliferation // inferred from electronic annotation /// 0061351 // neural precursor cell proliferation // inferred from sequence or structural similarity /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005005 // transmembrane-ephrin receptor activity // inferred from direct assay /// 0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008046 // axon guidance receptor activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay </td> <td> 18.15 </td> <td> 171.55 </td> <td> 1.01 </td> <td> 0.34 </td> <td> 0.43 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218847_at </td> <td> 218847_at </td> <td> NM_006548 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006548.1 /DEF=Homo sapiens IGF-II mRNA-binding protein 2 (IMP-2), mRNA. /FEA=mRNA /GEN=IMP-2 /PROD=IGF-II mRNA-binding protein 2 /DB_XREF=gi:5729883 /UG=Hs.30299 IGF-II mRNA-binding protein 2 /FL=gb:AF057352.1 gb:NM_006548.1 </td> <td> NM_006548 </td> <td> insulin-like growth factor 2 mRNA binding protein 2 </td> <td> IGF2BP2 </td> <td> 10644 </td> <td> NM_001007225 /// NM_001291869 /// NM_001291872 /// NM_001291873 /// NM_001291874 /// NM_001291875 /// NM_006548 /// XM_006713477 /// XM_006713478 /// XR_427358 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0042035 // regulation of cytokine biosynthetic process // inferred by curator /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0045182 // translation regulator activity // inferred from sequence or structural similarity /// 0048027 // mRNA 5'-UTR binding // inferred from direct assay </td> <td> 41.63 </td> <td> 283.36 </td> <td> 1.01 </td> <td> 0.34 </td> <td> 0.43 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200047_s_at </td> <td> 200047_s_at </td> <td> NM_003403 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003403.2 /DEF=Homo sapiens YY1 transcription factor (YY1), mRNA. /FEA=mRNA /GEN=YY1 /PROD=YY1 transcription factor /DB_XREF=gi:6042207 /UG=Hs.97496 YY1 transcription factor /FL=gb:M77698.1 gb:M76541.1 gb:NM_003403.2 </td> <td> NM_003403 </td> <td> YY1 transcription factor </td> <td> YY1 </td> <td> 7528 </td> <td> NM_003403 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006403 // RNA localization // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from mutant phenotype /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010225 // response to UV-C // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0034644 // cellular response to UV // inferred from mutant phenotype /// 0034696 // response to prostaglandin F // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0031011 // Ino80 complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from electronic annotation </td> <td> 0000400 // four-way junction DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -46.47 </td> <td> 535.04 </td> <td> -1.01 </td> <td> 0.34 </td> <td> 0.43 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200611_s_at </td> <td> 200611_s_at </td> <td> AB010427 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB010427.2 /DEF=Homo sapiens mRNA for NORI-1, complete cds. /FEA=mRNA /PROD=NORI-1 /DB_XREF=gi:5103672 /UG=Hs.85100 WD repeat domain 1 /FL=gb:BC000201.1 gb:BC002489.1 gb:AF020056.1 gb:AB010427.2 gb:NM_017491.1 </td> <td> AB010427 </td> <td> WD repeat domain 1 </td> <td> WDR1 </td> <td> 9948 </td> <td> NM_005112 /// NM_017491 /// XM_006713988 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007605 // sensory perception of sound // traceable author statement /// 0030168 // platelet activation // traceable author statement </td> <td> 0002102 // podosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -88.92 </td> <td> 1284.09 </td> <td> -1.01 </td> <td> 0.34 </td> <td> 0.43 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200726_at </td> <td> 200726_at </td> <td> NM_002710 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002710.1 /DEF=Homo sapiens protein phosphatase 1, catalytic subunit, gamma isoform (PPP1CC), mRNA.  /FEA=mRNA /GEN=PPP1CC /PROD=protein phosphatase 1, catalytic subunit, gammaisoform /DB_XREF=gi:4506006 /UG=Hs.79081 protein phosphatase 1, catalytic subunit, gamma isoform /FL=gb:NM_002710.1 </td> <td> NM_002710 </td> <td> protein phosphatase 1, catalytic subunit, gamma isozyme </td> <td> PPP1CC </td> <td> 5501 </td> <td> NM_001244974 /// NM_002710 /// XM_006719469 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005979 // regulation of glycogen biosynthetic process // inferred from electronic annotation /// 0005981 // regulation of glycogen catabolic process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0042752 // regulation of circadian rhythm // inferred from mutant phenotype /// 0043153 // entrainment of circadian clock by photoperiod // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0046822 // regulation of nucleocytoplasmic transport // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0000164 // protein phosphatase type 1 complex // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0042587 // glycogen granule // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043234 // protein complex // inferred from mutant phenotype /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // traceable author statement /// 0004722 // protein serine/threonine phosphatase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from physical interaction /// 0043021 // ribonucleoprotein complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> 66.53 </td> <td> 602.04 </td> <td> 1.01 </td> <td> 0.34 </td> <td> 0.43 </td> <td> -4.60 </td> </tr>
  <tr> <td> 221816_s_at </td> <td> 221816_s_at </td> <td> BF055474 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF055474 /FEA=EST /DB_XREF=gi:10809370 /DB_XREF=est:7j80f07.x1 /CLONE=IMAGE:3392773 /UG=Hs.279799 putative zinc finger protein NY-REN-34 antigen </td> <td> BF055474 </td> <td> PHD finger protein 11 </td> <td> PHF11 </td> <td> 51131 </td> <td> NM_001040443 /// NM_001040444 /// NM_016119 /// XM_005266417 /// XM_006719828 /// XM_006719829 /// XM_006719830 /// XM_006719831 /// XR_245387 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -12.95 </td> <td> 75.53 </td> <td> -1.01 </td> <td> 0.34 </td> <td> 0.43 </td> <td> -4.60 </td> </tr>
  <tr> <td> 203800_s_at </td> <td> 203800_s_at </td> <td> BG254653 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG254653 /FEA=EST /DB_XREF=gi:12764469 /DB_XREF=est:602368621F1 /CLONE=IMAGE:4476773 /UG=Hs.247324 hypothetical protein LOC63931 /FL=gb:NM_022100.1 </td> <td> BG254653 </td> <td> mitochondrial ribosomal protein S14 </td> <td> MRPS14 </td> <td> 63931 </td> <td> NM_022100 /// NR_037606 </td> <td> 0006412 // translation // non-traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -28.55 </td> <td> 243.85 </td> <td> -1.01 </td> <td> 0.35 </td> <td> 0.43 </td> <td> -4.60 </td> </tr>
  <tr> <td> 217485_x_at </td> <td> 217485_x_at </td> <td> D38435 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D38435.1 /DEF=Homo sapiens hPMS3 mRNA, partial cds. /FEA=mRNA /GEN=hPMS3 /DB_XREF=gi:600590 /UG=Hs.278466 postmeiotic segregation increased 2-like 1 </td> <td> D38435 </td> <td> postmeiotic segregation increased 2 pseudogene 1 </td> <td> PMS2P1 </td> <td> 5379 </td> <td> NM_005394 /// NR_003613 </td> <td> 0006298 // mismatch repair // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0032300 // mismatch repair complex // inferred from electronic annotation </td> <td> 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 13.70 </td> <td> 195.70 </td> <td> 1.01 </td> <td> 0.35 </td> <td> 0.43 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202810_at </td> <td> 202810_at </td> <td> NM_004147 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004147.1 /DEF=Homo sapiens developmentally regulated GTP-binding protein 1 (DRG1), mRNA.  /FEA=mRNA /GEN=DRG1 /PROD=developmentally regulated GTP-binding protein 1 /DB_XREF=gi:4758795 /UG=Hs.115242 developmentally regulated GTP-binding protein 1 /FL=gb:AF078103.1 gb:NM_004147.1 </td> <td> NM_004147 </td> <td> developmentally regulated GTP binding protein 1 </td> <td> DRG1 </td> <td> 4733 </td> <td> NM_004147 </td> <td> 0006351 // transcription, DNA-templated // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0015684 // ferrous iron transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005844 // polysome // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // traceable author statement /// 0015093 // ferrous iron transmembrane transporter activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 34.05 </td> <td> 408.73 </td> <td> 1.00 </td> <td> 0.35 </td> <td> 0.43 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218080_x_at </td> <td> 218080_x_at </td> <td> NM_007051 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007051.1 /DEF=Homo sapiens Fas (TNFRSF6) associated factor 1 (FAF1), mRNA. /FEA=mRNA /GEN=FAF1 /PROD=Fas (TNFRSF6) associated factor 1 /DB_XREF=gi:5901947 /UG=Hs.25821 Fas (TNFRSF6) associated factor 1 /FL=gb:BC004970.1 gb:AF132938.1 gb:AF106798.1 gb:NM_007051.1 </td> <td> NM_007051 </td> <td> Fas (TNFRSF6) associated factor 1 </td> <td> FAF1 </td> <td> 11124 </td> <td> NM_007051 /// NM_131917 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007253 // cytoplasmic sequestering of NF-kappaB // inferred from mutant phenotype /// 0008219 // cell death // inferred from mutant phenotype /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0031334 // positive regulation of protein complex assembly // inferred from mutant phenotype /// 0042176 // regulation of protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // non-traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0045859 // regulation of protein kinase activity // non-traceable author statement /// 1902043 // positive regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0031265 // CD95 death-inducing signaling complex // non-traceable author statement /// 0034098 // Cdc48p-Npl4p-Ufd1p AAA ATPase complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019887 // protein kinase regulator activity // non-traceable author statement /// 0019901 // protein kinase binding // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0051059 // NF-kappaB binding // inferred from physical interaction </td> <td> 16.45 </td> <td> 78.58 </td> <td> 1.00 </td> <td> 0.35 </td> <td> 0.43 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201978_s_at </td> <td> 201978_s_at </td> <td> NM_014773 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014773.1 /DEF=Homo sapiens KIAA0141 gene product (KIAA0141), mRNA. /FEA=mRNA /GEN=KIAA0141 /PROD=KIAA0141 gene product /DB_XREF=gi:7661939 /UG=Hs.63510 KIAA0141 gene product /FL=gb:D50931.1 gb:NM_014773.1 </td> <td> NM_014773 </td> <td> KIAA0141 </td> <td> KIAA0141 </td> <td> 9812 </td> <td> NM_001142603 /// NM_014773 /// XM_005268547 /// XM_005268548 /// XM_005268549 /// XM_005268550 /// XM_005268551 /// XM_005268552 /// XM_006714812 /// XR_245861 /// XR_427782 /// XR_427783 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 0043281 // regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 16.92 </td> <td> 41.19 </td> <td> 1.00 </td> <td> 0.35 </td> <td> 0.43 </td> <td> -4.60 </td> </tr>
  <tr> <td> 212547_at </td> <td> 212547_at </td> <td> N34842 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N34842 /FEA=EST /DB_XREF=gi:1155984 /DB_XREF=est:yy45d11.s1 /CLONE=IMAGE:276501 /UG=Hs.6580 Homo sapiens cDNA: FLJ23227 fis, clone CAE00645, highly similar to AF052138 Homo sapiens clone 23718 mRNA sequence </td> <td> N34842 </td> <td> bromodomain containing 3 </td> <td> BRD3 </td> <td> 8019 </td> <td> NM_007371 /// XM_005272214 /// XM_006717291 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0070577 // lysine-acetylated histone binding // inferred from direct assay </td> <td> -22.37 </td> <td> 221.56 </td> <td> -1.00 </td> <td> 0.35 </td> <td> 0.43 </td> <td> -4.60 </td> </tr>
  <tr> <td> 55705_at </td> <td> 55705_at </td> <td> W07773 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. W07773:zb03g04.r1 Homo sapiens cDNA, 5 end /clone=IMAGE-301014 /clone_end=5' /gb=W07773 /gi=1281785 /ug=Hs.9739 /len=533 </td> <td> W07773 </td> <td> R3H domain containing 4 </td> <td> R3HDM4 </td> <td> 91300 </td> <td> NM_138774 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation </td> <td> -28.00 </td> <td> 555.58 </td> <td> -1.00 </td> <td> 0.35 </td> <td> 0.43 </td> <td> -4.60 </td> </tr>
  <tr> <td> 208815_x_at </td> <td> 208815_x_at </td> <td> AB023420 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB023420.1 /DEF=Homo sapiens mRNA for heat shock protein apg-2, complete cds. /FEA=mRNA /GEN=apg-2 /PROD=apg-2 /DB_XREF=gi:4579908 /UG=Hs.90093 heat shock 70kD protein 4 /FL=gb:AB023420.1 </td> <td> AB023420 </td> <td> heat shock 70kDa protein 4 </td> <td> HSPA4 </td> <td> 3308 </td> <td> NM_002154 /// NM_198431 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0045040 // protein import into mitochondrial outer membrane // inferred from direct assay /// 0051131 // chaperone-mediated protein complex assembly // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement </td> <td> 18.62 </td> <td> 274.71 </td> <td> 1.00 </td> <td> 0.35 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 216194_s_at </td> <td> 216194_s_at </td> <td> AD001527 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AD001527 /DEF=Homo sapiens DNA from chromosome 19-cosmid f24590 containing CAPNS and POL2RI, genomic sequence /FEA=CDS_3 /DB_XREF=gi:1905899 /UG=Hs.31053 cytoskeleton-associated protein 1 </td> <td> AD001527 </td> <td> tubulin folding cofactor B </td> <td> TBCB </td> <td> 1155 </td> <td> NM_001281 /// XM_006722998 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 24.45 </td> <td> 300.40 </td> <td> 1.00 </td> <td> 0.35 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201359_at </td> <td> 201359_at </td> <td> NM_016451 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016451.1 /DEF=Homo sapiens coatomer protein complex, subunit beta (COPB), mRNA. /FEA=mRNA /GEN=COPB /PROD=coatomer protein complex, subunit beta /DB_XREF=gi:7705368 /UG=Hs.3059 coatomer protein complex, subunit beta /FL=gb:AF084457.1 gb:AL136593.1 gb:NM_016451.1 </td> <td> NM_016451 </td> <td> coatomer protein complex, subunit beta 1 </td> <td> COPB1 </td> <td> 1315 </td> <td> NM_001144061 /// NM_001144062 /// NM_016451 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005798 // Golgi-associated vesicle // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030137 // COPI-coated vesicle // inferred from electronic annotation /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -35.23 </td> <td> 689.51 </td> <td> -1.00 </td> <td> 0.35 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 217773_s_at </td> <td> 217773_s_at </td> <td> NM_002489 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002489.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 (9kD, MLRQ) (NDUFA4), mRNA.  /FEA=mRNA /GEN=NDUFA4 /PROD=NADH dehydrogenase (ubiquinone) 1 alphasubcomplex, 4 (9kD, MLRQ) /DB_XREF=gi:4505356 /UG=Hs.50098 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 (9kD, MLRQ) /FL=gb:U94586.1 gb:NM_002489.1 gb:AF201077.1 </td> <td> NM_002489 </td> <td> NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa </td> <td> NDUFA4 </td> <td> 4697 </td> <td> NM_002489 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0005751 // mitochondrial respiratory chain complex IV // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from mutant phenotype /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0032403 // protein complex binding // inferred from direct assay </td> <td> 49.35 </td> <td> 602.38 </td> <td> 1.00 </td> <td> 0.35 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202776_at </td> <td> 202776_at </td> <td> NM_014597 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014597.1 /DEF=Homo sapiens acidic 82 kDa protein mRNA (HSU15552), mRNA. /FEA=mRNA /GEN=HSU15552 /PROD=acidic 82 kDa protein mRNA /DB_XREF=gi:7657203 /UG=Hs.85769 acidic 82 kDa protein mRNA /FL=gb:U15552.1 gb:NM_014597.1 </td> <td> NM_014597 </td> <td> deoxynucleotidyltransferase, terminal, interacting protein 2 </td> <td> DNTTIP2 </td> <td> 30836 </td> <td> NM_014597 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 39.63 </td> <td> 253.41 </td> <td> 1.00 </td> <td> 0.35 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 217720_at </td> <td> 217720_at </td> <td> NM_016139 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016139.1 /DEF=Homo sapiens 16.7Kd protein (LOC51142), mRNA. /FEA=mRNA /GEN=LOC51142 /PROD=16.7Kd protein /DB_XREF=gi:7705850 /UG=Hs.180859 16.7Kd protein /FL=gb:BC003079.1 gb:AF078845.1 gb:NM_016139.1 </td> <td> NM_016139 </td> <td> coiled-coil-helix-coiled-coil-helix domain containing 2 </td> <td> CHCHD2 </td> <td> 51142 </td> <td> NM_016139 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from direct assay </td> <td>  </td> <td> -175.78 </td> <td> 1988.79 </td> <td> -0.99 </td> <td> 0.35 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 221819_at </td> <td> 221819_at </td> <td> BF791960 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF791960 /FEA=EST /DB_XREF=gi:12097014 /DB_XREF=est:602252342F1 /CLONE=IMAGE:4344539 /UG=Hs.94308 Homo sapiens cDNA FLJ10447 fis, clone NT2RP1000851 </td> <td> BF791960 </td> <td> RAB35, member RAS oncogene family </td> <td> RAB35 </td> <td> 11021 </td> <td> NM_001167606 /// NM_006861 </td> <td> 0000910 // cytokinesis // inferred from mutant phenotype /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008104 // protein localization // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0019882 // antigen processing and presentation // inferred from mutant phenotype /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0036010 // protein localization to endosome // inferred from mutant phenotype /// 1990090 // cellular response to nerve growth factor stimulus // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0010008 // endosome membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031253 // cell projection membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045171 // intercellular bridge // inferred from direct assay /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0019003 // GDP binding // inferred from direct assay </td> <td> -40.77 </td> <td> 243.51 </td> <td> -0.99 </td> <td> 0.35 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 214182_at </td> <td> 214182_at </td> <td> AA243143 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA243143 /FEA=EST /DB_XREF=gi:1874138 /DB_XREF=est:zs13h04.s1 /CLONE=IMAGE:685111 /UG=Hs.89474 ADP-ribosylation factor 6 </td> <td> AA243143 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 23.62 </td> <td> 113.81 </td> <td> 0.99 </td> <td> 0.35 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 217256_x_at </td> <td> 217256_x_at </td> <td> Z98950 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:Z98950 /DEF=Human DNA sequence from PAC 507I15 on chromosome Xq26.3-27.3. Contains 60S ribosomal protein L44 (L41, L36) like gene, ESTs, STSs and a polymorphic CA repeat /FEA=CDS /DB_XREF=gi:3036783 /UG=Hs.248094 Human DNA sequence from PAC 507I15 on chromosome Xq26.3-27.3. Contains 60S ribosomal protein L44 (L41, L36) like gene, ESTs, STSs and a polymorphic CA repeat </td> <td> Z98950 </td> <td>  </td> <td> RP3-507I15.1 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -48.35 </td> <td> 453.45 </td> <td> -0.99 </td> <td> 0.35 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 206621_s_at </td> <td> 206621_s_at </td> <td> NM_022170 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022170.1 /DEF=Homo sapiens Williams-Beuren syndrome chromosome region 1 (WBSCR1), mRNA.  /FEA=mRNA /GEN=WBSCR1 /PROD=eukaryotic translation initiation factor 4H /DB_XREF=gi:11559922 /UG=Hs.180900 Williams-Beuren syndrome chromosome region 1 /FL=gb:NM_022170.1 </td> <td> NM_022170 </td> <td> eukaryotic translation initiation factor 4H </td> <td> EIF4H </td> <td> 7458 </td> <td> NM_022170 /// NM_031992 </td> <td> 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019953 // sexual reproduction // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048589 // developmental growth // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -39.28 </td> <td> 848.94 </td> <td> -0.99 </td> <td> 0.35 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201289_at </td> <td> 201289_at </td> <td> NM_001554 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001554.1 /DEF=Homo sapiens cysteine-rich, angiogenic inducer, 61 (CYR61), mRNA. /FEA=mRNA /GEN=CYR61 /PROD=cysteine-rich, angiogenic inducer, 61 /DB_XREF=gi:4504612 /UG=Hs.8867 cysteine-rich, angiogenic inducer, 61 /FL=gb:BC001271.1 gb:U62015.1 gb:AF003594.1 gb:AF031385.1 gb:NM_001554.1 </td> <td> NM_001554 </td> <td> cysteine-rich, angiogenic inducer, 61 </td> <td> CYR61 </td> <td> 3491 </td> <td> NM_001554 </td> <td> 0001558 // regulation of cell growth // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0002041 // intussusceptive angiogenesis // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003278 // apoptotic process involved in heart morphogenesis // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0010518 // positive regulation of phospholipase activity // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030513 // positive regulation of BMP signaling pathway // inferred from genetic interaction /// 0033690 // positive regulation of osteoblast proliferation // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0044319 // wound healing, spreading of cells // inferred from direct assay /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060413 // atrial septum morphogenesis // inferred from electronic annotation /// 0060591 // chondroblast differentiation // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0061036 // positive regulation of cartilage development // inferred from electronic annotation /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2000304 // positive regulation of ceramide biosynthetic process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation </td> <td> 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation </td> <td> 173.97 </td> <td> 1567.91 </td> <td> 0.99 </td> <td> 0.35 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 208728_s_at </td> <td> 208728_s_at </td> <td> BC003682 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003682.1 /DEF=Homo sapiens, cell division cycle 42 (GTP-binding protein, 25kD), clone MGC:5044, mRNA, complete cds.  /FEA=mRNA /PROD=cell division cycle 42 (GTP-binding protein,25kD) /DB_XREF=gi:13277547 /UG=Hs.146409 cell division cycle 42 (GTP-binding protein, 25kD) /FL=gb:BC002711.1 gb:BC003682.1 gb:M57298.1 gb:NM_001791.1 </td> <td> BC003682 </td> <td> cell division cycle 42 </td> <td> CDC42 </td> <td> 998 </td> <td> NM_001039802 /// NM_001791 /// NM_044472 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0003161 // cardiac conduction system development // inferred from electronic annotation /// 0003334 // keratinocyte development // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007088 // regulation of mitosis // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030225 // macrophage differentiation // traceable author statement /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031274 // positive regulation of pseudopodium assembly // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0031333 // negative regulation of protein complex assembly // inferred from physical interaction /// 0031424 // keratinization // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from mutant phenotype /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043497 // regulation of protein heterodimerization activity // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048554 // positive regulation of metalloenzyme activity // inferred from electronic annotation /// 0048664 // neuron fate determination // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051246 // regulation of protein metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051489 // regulation of filopodium assembly // inferred from direct assay /// 0051647 // nucleus localization // inferred from electronic annotation /// 0051683 // establishment of Golgi localization // inferred from sequence or structural similarity /// 0051835 // positive regulation of synapse structural plasticity // inferred from electronic annotation /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0060047 // heart contraction // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway // inferred from electronic annotation /// 0060661 // submandibular salivary gland formation // inferred from electronic annotation /// 0060684 // epithelial-mesenchymal cell signaling // inferred from electronic annotation /// 0060789 // hair follicle placode formation // inferred from electronic annotation /// 0071338 // positive regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0072384 // organelle transport along microtubule // inferred from sequence or structural similarity /// 0090135 // actin filament branching // inferred from electronic annotation /// 0090136 // epithelial cell-cell adhesion // inferred from electronic annotation /// 0090316 // positive regulation of intracellular protein transport // inferred from electronic annotation /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030141 // secretory granule // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071944 // cell periphery // inferred from electronic annotation /// 0072686 // mitotic spindle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction /// 0034191 // apolipoprotein A-I receptor binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 34.38 </td> <td> 240.01 </td> <td> 0.99 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 214501_s_at </td> <td> 214501_s_at </td> <td> AF044286 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF044286.1 /DEF=Homo sapiens histone macroH2A1.1 mRNA, complete cds. /FEA=CDS /PROD=histone macroH2A1.1 /DB_XREF=gi:3493530 /UG=Hs.75258 H2A histone family, member Y /FL=gb:AF044286.1 </td> <td> AF044286 </td> <td> H2A histone family, member Y </td> <td> H2AFY </td> <td> 9555 </td> <td> NM_001040158 /// NM_004893 /// NM_138609 /// NM_138610 /// XM_005272132 /// XM_005272134 /// XM_005272135 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001558 // regulation of cell growth // inferred from genetic interaction /// 0006334 // nucleosome assembly // non-traceable author statement /// 0007549 // dosage compensation // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0033128 // negative regulation of histone phosphorylation // inferred from mutant phenotype /// 0045814 // negative regulation of gene expression, epigenetic // inferred from mutant phenotype /// 0061187 // regulation of chromatin silencing at rDNA // inferred from mutant phenotype /// 0071169 // establishment of protein localization to chromatin // inferred from mutant phenotype /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from mutant phenotype /// 1901837 // negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter // inferred from genetic interaction /// 1901837 // negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter // inferred from mutant phenotype /// 1902750 // negative regulation of cell cycle G2/M phase transition // inferred from mutant phenotype </td> <td> 0000786 // nucleosome // non-traceable author statement /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000793 // condensed chromosome // inferred from electronic annotation /// 0001739 // sex chromatin // traceable author statement /// 0001740 // Barr body // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000182 // rDNA binding // inferred from direct assay /// 0003677 // DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0010385 // double-stranded methylated DNA binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030291 // protein serine/threonine kinase inhibitor activity // inferred from mutant phenotype /// 0031490 // chromatin DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -19.18 </td> <td> 254.49 </td> <td> -0.98 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 214247_s_at </td> <td> 214247_s_at </td> <td> AU148057 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU148057 /FEA=EST /DB_XREF=gi:11009578 /DB_XREF=est:AU148057 /CLONE=MAMMA1002489 /UG=Hs.278503 regulated in glioma </td> <td> AU148057 </td> <td> dickkopf WNT signaling pathway inhibitor 3 </td> <td> DKK3 </td> <td> 27122 </td> <td> NM_001018057 /// NM_013253 /// NM_015881 /// XM_006718177 /// XM_006718178 /// XM_006718179 /// XM_006718180 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from expression pattern /// 0032348 // negative regulation of aldosterone biosynthetic process // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from direct assay /// 2000065 // negative regulation of cortisol biosynthetic process // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement </td> <td>  </td> <td> 37.95 </td> <td> 523.25 </td> <td> 0.98 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209247_s_at </td> <td> 209247_s_at </td> <td> BC001661 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001661.1 /DEF=Homo sapiens, ATP-binding cassette, sub-family F (GCN20), member 2, clone MGC:1425, mRNA, complete cds.  /FEA=mRNA /PROD=ATP-binding cassette, sub-family F (GCN20),member 2 /DB_XREF=gi:12804500 /UG=Hs.153612 ATP-binding cassette, sub-family F (GCN20), member 2 /FL=gb:AF261091.1 gb:AF261092.1 gb:BC001661.1 gb:AF091073.1 </td> <td> BC001661 </td> <td> ATP-binding cassette, sub-family F (GCN20), member 2 </td> <td> ABCF2 </td> <td> 10061 </td> <td> NM_005692 /// NM_007189 /// XM_005249931 /// XM_006715824 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0043190 // ATP-binding cassette (ABC) transporter complex // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> 14.97 </td> <td> 201.66 </td> <td> 0.98 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218051_s_at </td> <td> 218051_s_at </td> <td> NM_022908 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022908.1 /DEF=Homo sapiens hypothetical protein FLJ12442 (FLJ12442), mRNA. /FEA=mRNA /GEN=FLJ12442 /PROD=hypothetical protein FLJ12442 /DB_XREF=gi:12597652 /UG=Hs.84753 hypothetical protein FLJ12442 /FL=gb:NM_022908.1 </td> <td> NM_022908 </td> <td> 5'-nucleotidase domain containing 2 </td> <td> NT5DC2 </td> <td> 64943 </td> <td> NM_001134231 /// NM_022908 /// XM_005265406 /// XM_006713303 /// XM_006713304 /// XM_006713305 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td>  </td> <td> 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 28.00 </td> <td> 347.30 </td> <td> 0.98 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 221923_s_at </td> <td> 221923_s_at </td> <td> AA191576 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA191576 /FEA=EST /DB_XREF=gi:1780275 /DB_XREF=est:zp81c10.s1 /CLONE=IMAGE:626610 /UG=Hs.9614 nucleophosmin (nucleolar phosphoprotein B23, numatrin) </td> <td> AA191576 </td> <td> nucleophosmin (nucleolar phosphoprotein B23, numatrin) </td> <td> NPM1 </td> <td> 4869 </td> <td> NM_001037738 /// NM_002520 /// NM_199185 /// XM_005265920 /// XM_006714869 </td> <td> 0006281 // DNA repair // inferred from direct assay /// 0006334 // nucleosome assembly // inferred from direct assay /// 0006334 // nucleosome assembly // traceable author statement /// 0006886 // intracellular protein transport // traceable author statement /// 0006913 // nucleocytoplasmic transport // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // traceable author statement /// 0006950 // response to stress // inferred from mutant phenotype /// 0007098 // centrosome cycle // inferred from mutant phenotype /// 0007098 // centrosome cycle // inferred from sequence or structural similarity /// 0007165 // signal transduction // non-traceable author statement /// 0007569 // cell aging // inferred from mutant phenotype /// 0007569 // cell aging // inferred from sequence or structural similarity /// 0008104 // protein localization // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0010826 // negative regulation of centrosome duplication // inferred from mutant phenotype /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032071 // regulation of endodeoxyribonuclease activity // inferred from direct assay /// 0034080 // centromere-specific nucleosome assembly // traceable author statement /// 0042255 // ribosome assembly // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 0044387 // negative regulation of protein kinase activity by regulation of protein phosphorylation // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay /// 0046599 // regulation of centriole replication // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051259 // protein oligomerization // inferred from direct assay /// 0060699 // regulation of endoribonuclease activity // inferred from direct assay /// 0060735 // regulation of eIF2 alpha phosphorylation by dsRNA // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0031616 // spindle pole centrosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003723 // RNA binding // inferred from direct assay /// 0004860 // protein kinase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030957 // Tat protein binding // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043023 // ribosomal large subunit binding // inferred from direct assay /// 0043024 // ribosomal small subunit binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from mutant phenotype /// 0051059 // NF-kappaB binding // inferred from direct assay /// 0051059 // NF-kappaB binding // inferred from sequence or structural similarity /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from sequence or structural similarity </td> <td> -77.83 </td> <td> 1060.44 </td> <td> -0.98 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 217898_at </td> <td> 217898_at </td> <td> NM_020154 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020154.1 /DEF=Homo sapiens chromosome 11 hypothetical protein ORF3 (LOC56851), mRNA.  /FEA=mRNA /GEN=LOC56851 /PROD=chromosome 11 hypothetical protein ORF3 /DB_XREF=gi:9910345 /UG=Hs.4245 chromosome 11 hypothetical protein ORF3 /FL=gb:AF242729.1 gb:NM_020154.1 </td> <td> NM_020154 </td> <td> ER membrane protein complex subunit 7 </td> <td> EMC7 </td> <td> 56851 </td> <td> NM_020154 </td> <td>  </td> <td> 0005737 // cytoplasm // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0016021 // integral component of membrane // non-traceable author statement /// 0072546 // ER membrane protein complex // inferred from direct assay </td> <td> 0017076 // purine nucleotide binding // non-traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation </td> <td> 28.00 </td> <td> 269.45 </td> <td> 0.98 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218190_s_at </td> <td> 218190_s_at </td> <td> NM_013387 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013387.1 /DEF=Homo sapiens ubiquinol-cytochrome c reductase complex (7.2 kD) (HSPC051), mRNA.  /FEA=mRNA /GEN=HSPC051 /PROD=ubiquinol-cytochrome c reductase complex (7.2kD) /DB_XREF=gi:9994180 /UG=Hs.284292 ubiquinol-cytochrome c reductase complex (7.2 kD) /FL=gb:AB028598.1 gb:BC005402.1 gb:AF112217.1 gb:AF161536.1 gb:AF161468.1 gb:NM_013387.1 </td> <td> NM_013387 </td> <td> ubiquinol-cytochrome c reductase, complex III subunit X </td> <td> UQCR10 </td> <td> 29796 </td> <td> NM_001003684 /// NM_013387 </td> <td> 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // non-traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008121 // ubiquinol-cytochrome-c reductase activity // non-traceable author statement </td> <td> 90.05 </td> <td> 869.92 </td> <td> 0.98 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 203562_at </td> <td> 203562_at </td> <td> NM_005103 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005103.2 /DEF=Homo sapiens fasciculation and elongation protein zeta 1 (zygin I) (FEZ1), transcript variant 1, mRNA.  /FEA=mRNA /GEN=FEZ1 /PROD=zygin 1, isoform 1 /DB_XREF=gi:12025681 /UG=Hs.79226 fasciculation and elongation protein zeta 1 (zygin I) /FL=gb:NM_005103.2 gb:U69139.1 gb:U60060.1 </td> <td> NM_005103 </td> <td> fasciculation and elongation protein zeta 1 (zygin I) </td> <td> FEZ1 </td> <td> 9638 </td> <td> NM_005103 /// NM_022549 /// XM_005271734 /// XM_005271735 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0051654 // establishment of mitochondrion localization // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation </td> <td> -18.65 </td> <td> 311.52 </td> <td> -0.98 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 219024_at </td> <td> 219024_at </td> <td> NM_021622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021622.1 /DEF=Homo sapiens pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 1 (PLEKHA1), mRNA.  /FEA=mRNA /GEN=PLEKHA1 /PROD=pleckstrin homology domain-containing, family A(phosphoinositide binding specific) member 1 /DB_XREF=gi:11055985 /UG=Hs.17757 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 1 /FL=gb:AF286160.1 gb:NM_021622.1 gb:BC001136.1 </td> <td> NM_021622 </td> <td> pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 </td> <td> PLEKHA1 </td> <td> 59338 </td> <td> NM_001001974 /// NM_001195608 /// NM_021622 /// XM_005270016 /// XM_005270017 /// XM_005270018 /// XM_005270019 /// XM_005270020 /// XM_005270021 /// XM_006717935 </td> <td> 0001553 // luteinization // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase signaling // inferred from direct assay /// 0031529 // ruffle organization // inferred from direct assay /// 0033327 // Leydig cell differentiation // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from direct assay /// 0051898 // negative regulation of protein kinase B signaling // inferred from mutant phenotype /// 0060021 // palate development // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay </td> <td> 22.83 </td> <td> 163.39 </td> <td> 0.98 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 58900_at </td> <td> 58900_at </td> <td> AW025284 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AW025284:wu95h10.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-990806 /clone_end=3' /gb=AW025284 /gi=5878814 /ug=Hs.237946 /len=454 </td> <td> AW025284 </td> <td> ubiquitin-conjugating enzyme E2D 4 (putative) </td> <td> UBE2D4 </td> <td> 51619 </td> <td> NM_015983 /// XM_005249772 /// XM_006715734 /// XM_006715735 /// XM_006715736 /// XM_006715737 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035519 // protein K29-linked ubiquitination // inferred from direct assay /// 0044314 // protein K27-linked ubiquitination // inferred from direct assay /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0085020 // protein K6-linked ubiquitination // inferred from direct assay </td> <td>  </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> 24.52 </td> <td> 298.39 </td> <td> 0.98 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201994_at </td> <td> 201994_at </td> <td> NM_012286 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012286.1 /DEF=Homo sapiens MORF-related gene X (KIAA0026), mRNA. /FEA=mRNA /GEN=KIAA0026 /PROD=MORF-related gene X /DB_XREF=gi:6912447 /UG=Hs.173714 MORF-related gene X /FL=gb:D14812.1 gb:AF100620.1 gb:NM_012286.1 gb:AF167174.1 </td> <td> NM_012286 </td> <td> mortality factor 4 like 2 </td> <td> MORF4L2 </td> <td> 9643 </td> <td> NM_001142418 /// NM_001142419 /// NM_001142420 /// NM_001142421 /// NM_001142422 /// NM_001142423 /// NM_001142424 /// NM_001142425 /// NM_001142426 /// NM_001142427 /// NM_001142428 /// NM_001142429 /// NM_001142430 /// NM_001142431 /// NM_001142432 /// NM_012286 </td> <td> 0001558 // regulation of cell growth // non-traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051155 // positive regulation of striated muscle cell differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 86.38 </td> <td> 1759.94 </td> <td> 0.98 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 213291_s_at </td> <td> 213291_s_at </td> <td> AA160522 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA160522 /FEA=EST /DB_XREF=gi:1735889 /DB_XREF=est:zq46b10.s1 /CLONE=IMAGE:632731 /UG=Hs.301667 Homo sapiens mRNA; cDNA DKFZp566I043 (from clone DKFZp566I043) </td> <td> AA160522 </td> <td> ubiquitin protein ligase E3A </td> <td> UBE3A </td> <td> 7337 </td> <td> NM_000462 /// NM_130838 /// NM_130839 /// XM_005268267 /// XM_005268268 /// XM_005268269 /// XM_005268270 /// XM_005268271 /// XM_006720673 /// XM_006720674 /// XM_006720675 /// XM_006720676 </td> <td> 0001541 // ovarian follicle development // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007420 // brain development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // not recorded /// 0035037 // sperm entry // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0060736 // prostate gland growth // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded /// 0005829 // cytosol // inferred from electronic annotation </td> <td> 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -19.47 </td> <td> 199.51 </td> <td> -0.98 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200971_s_at </td> <td> 200971_s_at </td> <td> NM_014445 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014445.1 /DEF=Homo sapiens stress-associated endoplasmic reticulum protein 1; ribosome associated membrane protein 4 (SERP1), mRNA.  /FEA=mRNA /GEN=SERP1 /PROD=stress-associated endoplasmic reticulum protein1; ribosome associated membrane protein 4 /DB_XREF=gi:7657551 /UG=Hs.76698 stress-associated endoplasmic reticulum protein 1; ribosome associated membrane protein 4 /FL=gb:AL136807.1 gb:AF136975.1 gb:AB022427.1 gb:NM_014445.1 </td> <td> NM_014445 </td> <td> uncharacterized LOC101928061 /// stress-associated endoplasmic reticulum protein 1 </td> <td> LOC101928061 /// SERP1 </td> <td> 27230 /// 101928061 </td> <td> NM_014445 /// XR_241595 /// XR_249518 /// XR_251476 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007009 // plasma membrane organization // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048644 // muscle organ morphogenesis // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005840 // ribosome // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 62.47 </td> <td> 805.76 </td> <td> 0.98 </td> <td> 0.36 </td> <td> 0.44 </td> <td> -4.60 </td> </tr>
  <tr> <td> 213101_s_at </td> <td> 213101_s_at </td> <td> Z78330 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:Z78330 /FEA=EST /DB_XREF=gi:1495103 /DB_XREF=est:HSZ78330 /CLONE=2.49 (CEPH) /UG=Hs.10927 hypothetical protein EUROIMAGE1875335 </td> <td> Z78330 </td> <td> ARP3 actin-related protein 3 homolog (yeast) </td> <td> ACTR3 </td> <td> 10096 </td> <td> NM_001277140 /// NM_005721 /// NR_102318 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0008356 // asymmetric cell division // inferred from electronic annotation /// 0009743 // response to carbohydrate // inferred from electronic annotation /// 0010592 // positive regulation of lamellipodium assembly // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0033206 // meiotic cytokinesis // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043519 // regulation of myosin II filament organization // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051321 // meiotic cell cycle // inferred from electronic annotation /// 0051491 // positive regulation of filopodium assembly // inferred from electronic annotation /// 0051653 // spindle localization // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0002102 // podosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> -91.55 </td> <td> 2324.95 </td> <td> -0.97 </td> <td> 0.36 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 212028_at </td> <td> 212028_at </td> <td> BE466128 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE466128 /FEA=EST /DB_XREF=gi:9511903 /DB_XREF=est:hy10f03.x1 /CLONE=IMAGE:3196925 /UG=Hs.180789 S164 protein </td> <td> BE466128 </td> <td> RNA binding motif protein 25 </td> <td> RBM25 </td> <td> 58517 </td> <td> NM_021239 </td> <td> 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0097194 // execution phase of apoptosis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -17.68 </td> <td> 127.71 </td> <td> -0.97 </td> <td> 0.36 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 203006_at </td> <td> 203006_at </td> <td> NM_005539 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005539.1 /DEF=Homo sapiens inositol polyphosphate-5-phosphatase, 40kD (INPP5A), mRNA.  /FEA=mRNA /GEN=INPP5A /PROD=inositol polyphosphate-5-phosphatase, 40kD /DB_XREF=gi:5031796 /UG=Hs.124029 inositol polyphosphate-5-phosphatase, 40kD /FL=gb:NM_005539.1 </td> <td> NM_005539 </td> <td> inositol polyphosphate-5-phosphatase, 40kDa </td> <td> INPP5A </td> <td> 3632 </td> <td> NM_005539 </td> <td> 0007154 // cell communication // non-traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046856 // phosphatidylinositol dephosphorylation // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004445 // inositol-polyphosphate 5-phosphatase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042731 // PH domain binding // inferred from physical interaction /// 0052658 // inositol-1,4,5-trisphosphate 5-phosphatase activity // inferred from electronic annotation /// 0052659 // inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity // inferred from electronic annotation </td> <td> 27.07 </td> <td> 236.76 </td> <td> 0.97 </td> <td> 0.36 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 212897_at </td> <td> 212897_at </td> <td> AI738802 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI738802 /FEA=EST /DB_XREF=gi:5100783 /DB_XREF=est:wi36g07.x1 /CLONE=IMAGE:2392380 /UG=Hs.129836 KIAA1028 protein </td> <td> AI738802 </td> <td> cyclin-dependent kinase 19 </td> <td> CDK19 </td> <td> 23097 </td> <td> NM_015076 /// XM_005266870 /// XM_005266871 /// XM_005266872 /// XM_005266873 /// XM_006715402 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td>  </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -15.50 </td> <td> 43.92 </td> <td> -0.97 </td> <td> 0.36 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201151_s_at </td> <td> 201151_s_at </td> <td> BF512200 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF512200 /FEA=EST /DB_XREF=gi:11597379 /DB_XREF=est:UI-H-BI3-alq-d-11-0-UI.s1 /CLONE=IMAGE:3068228 /UG=Hs.28578 muscleblind (Drosophila)-like /FL=gb:NM_021038.1 gb:AB007888.1 </td> <td> BF512200 </td> <td> muscleblind-like splicing regulator 1 </td> <td> MBNL1 </td> <td> 4154 </td> <td> NM_021038 /// NM_207292 /// NM_207293 /// NM_207294 /// NM_207295 /// NM_207296 /// NM_207297 /// XM_005247457 /// XM_005247458 /// XM_005247459 /// XM_005247460 /// XM_005247461 /// XM_005247462 /// XM_005247463 /// XM_005247464 /// XM_005247465 /// XM_005247466 /// XM_005247467 /// XM_005247468 /// XM_005247469 /// XM_005247470 /// XM_005247471 /// XM_005247472 /// XM_005247473 /// XM_005247474 /// XM_005247475 /// XM_005247476 /// XM_005247477 /// XM_006713639 /// XM_006713640 /// XM_006713641 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007399 // nervous system development // inferred from sequence or structural similarity /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0030326 // embryonic limb morphogenesis // inferred from sequence or structural similarity /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0045445 // myoblast differentiation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 40.85 </td> <td> 252.80 </td> <td> 0.97 </td> <td> 0.36 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202313_at </td> <td> 202313_at </td> <td> NM_002717 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002717.1 /DEF=Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform (PPP2R2A), mRNA.  /FEA=mRNA /GEN=PPP2R2A /PROD=protein phosphatase 2 (formerly 2A), regulatorysubunit B (PR 52), alpha isoform /DB_XREF=gi:4506018 /UG=Hs.179574 protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform /FL=gb:M64929.1 gb:NM_002717.1 </td> <td> NM_002717 </td> <td> protein phosphatase 2, regulatory subunit B, alpha </td> <td> PPP2R2A </td> <td> 5520 </td> <td> NM_001177591 /// NM_002717 /// XM_005273559 /// XM_005273560 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0007084 // mitotic nuclear envelope reassembly // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043278 // response to morphine // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // traceable author statement </td> <td> 0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement </td> <td> -24.10 </td> <td> 489.02 </td> <td> -0.97 </td> <td> 0.36 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209071_s_at </td> <td> 209071_s_at </td> <td> AF159570 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF159570.1 /DEF=Homo sapiens regulator of G-protein signalling 5 (RGS5) mRNA, complete cds.  /FEA=mRNA /GEN=RGS5 /PROD=regulator of G-protein signalling 5 /DB_XREF=gi:5230675 /UG=Hs.24950 regulator of G-protein signalling 5 /FL=gb:AB008109.1 gb:NM_003617.1 gb:AF159570.1 </td> <td> AF159570 </td> <td> regulator of G-protein signaling 5 </td> <td> RGS5 </td> <td> 8490 </td> <td> NM_001195303 /// NM_001254748 /// NM_001254749 /// NM_003617 /// NM_025226 /// NR_045630 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // not recorded </td> <td> 109.67 </td> <td> 1800.94 </td> <td> 0.97 </td> <td> 0.36 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 221728_x_at </td> <td> 221728_x_at </td> <td> AA628440 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA628440 /FEA=EST /DB_XREF=gi:2540827 /DB_XREF=est:af26f02.s1 /CLONE=IMAGE:1032795 /UG=Hs.83623 nuclear receptor subfamily 1, group I, member 3 </td> <td> AA628440 </td> <td> X inactive specific transcript (non-protein coding) </td> <td> XIST </td> <td> 7503 </td> <td> NR_001564 </td> <td>  </td> <td>  </td> <td>  </td> <td> 69.22 </td> <td> 298.11 </td> <td> 0.97 </td> <td> 0.36 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209503_s_at </td> <td> 209503_s_at </td> <td> AF035309 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF035309.1 /DEF=Homo sapiens clone 23598 mRNA, complete cds. /FEA=mRNA /DB_XREF=gi:2661070 /UG=Hs.79387 proteasome (prosome, macropain) 26S subunit, ATPase, 5 /FL=gb:AF035309.1 </td> <td> AF035309 </td> <td> proteasome (prosome, macropain) 26S subunit, ATPase, 5 </td> <td> PSMC5 </td> <td> 5705 </td> <td> NM_001199163 /// NM_002805 /// XM_006721980 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043069 // negative regulation of programmed cell death // non-traceable author statement /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0090261 // positive regulation of inclusion body assembly // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016234 // inclusion body // inferred from electronic annotation /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0031595 // nuclear proteasome complex // inferred from electronic annotation /// 0031597 // cytosolic proteasome complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0009378 // four-way junction helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0016887 // ATPase activity // traceable author statement /// 0017025 // TBP-class protein binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0031531 // thyrotropin-releasing hormone receptor binding // inferred from physical interaction </td> <td> 40.68 </td> <td> 313.66 </td> <td> 0.97 </td> <td> 0.36 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 221676_s_at </td> <td> 221676_s_at </td> <td> BC002342 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002342.1 /DEF=Homo sapiens, coronin, actin-binding protein, 1C, clone MGC:8518, mRNA, complete cds.  /FEA=mRNA /PROD=coronin, actin-binding protein, 1C /DB_XREF=gi:12803080 /UG=Hs.17377 coronin, actin-binding protein, 1C /FL=gb:BC002342.1 </td> <td> BC002342 </td> <td> coronin, actin binding protein, 1C </td> <td> CORO1C </td> <td> 23603 </td> <td> NM_001105237 /// NM_001276471 /// NM_014325 </td> <td> 0006909 // phagocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0030036 // actin cytoskeleton organization // not recorded </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0051015 // actin filament binding // not recorded </td> <td> -33.62 </td> <td> 543.69 </td> <td> -0.97 </td> <td> 0.36 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 213151_s_at </td> <td> 213151_s_at </td> <td> AU157515 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU157515 /FEA=EST /DB_XREF=gi:11019036 /DB_XREF=est:AU157515 /CLONE=PLACE1008067 /UG=Hs.184326 CDC10 (cell division cycle 10, S. cerevisiae, homolog) </td> <td> AU157515 </td> <td> septin 7 </td> <td> SEPT7 </td> <td> 989 </td> <td> NM_001011553 /// NM_001242956 /// NM_001788 /// XM_006715806 /// XM_006715807 /// XM_006715808 /// XM_006715809 /// XM_006715810 </td> <td> 0000910 // cytokinesis // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0016476 // regulation of embryonic cell shape // inferred from sequence or structural similarity /// 0051291 // protein heterooligomerization // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0001725 // stress fiber // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0005930 // axoneme // inferred from sequence or structural similarity /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0030496 // midbody // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 47.57 </td> <td> 799.91 </td> <td> 0.97 </td> <td> 0.36 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 211759_x_at </td> <td> 211759_x_at </td> <td> BC005969 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005969.1 /DEF=Homo sapiens, clone MGC:14625, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:14625) /DB_XREF=gi:13543641 /FL=gb:BC005969.1 </td> <td> BC005969 </td> <td> tubulin folding cofactor B </td> <td> TBCB </td> <td> 1155 </td> <td> NM_001281 /// XM_006722998 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -43.15 </td> <td> 530.15 </td> <td> -0.96 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200946_x_at </td> <td> 200946_x_at </td> <td> AI339331 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI339331 /FEA=EST /DB_XREF=gi:4076258 /DB_XREF=est:qt01g12.x1 /CLONE=IMAGE:1946374 /UG=Hs.77508 glutamate dehydrogenase 1 /FL=gb:J03248.1 gb:M37154.1 gb:M20867.1 gb:NM_005271.1 </td> <td> AI339331 </td> <td> glutamate dehydrogenase 1 </td> <td> GLUD1 </td> <td> 2746 </td> <td> NM_005271 </td> <td> 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006537 // glutamate biosynthetic process // inferred from direct assay /// 0006538 // glutamate catabolic process // inferred from direct assay /// 0006541 // glutamine metabolic process // inferred from sequence or structural similarity /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0032024 // positive regulation of insulin secretion // inferred from mutant phenotype /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0072350 // tricarboxylic acid metabolic process // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004352 // glutamate dehydrogenase (NAD+) activity // inferred from direct assay /// 0004353 // glutamate dehydrogenase [NAD(P)+] activity // not recorded /// 0004353 // glutamate dehydrogenase [NAD(P)+] activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016639 // oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0042802 // identical protein binding // traceable author statement /// 0043531 // ADP binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from direct assay /// 0070728 // leucine binding // inferred from direct assay </td> <td> -22.40 </td> <td> 242.03 </td> <td> -0.96 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 212842_x_at </td> <td> 212842_x_at </td> <td> AL043571 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL043571 /FEA=EST /DB_XREF=gi:5422958 /DB_XREF=est:DKFZp434F1527_s1 /CLONE=DKFZp434F1527 /UG=Hs.179825 RAN binding protein 2-like 1 </td> <td> AL043571 </td> <td> RANBP2-like and GRIP domain containing 3 /// RANBP2-like and GRIP domain containing 4 /// RANBP2-like and GRIP domain containing 5 /// RANBP2-like and GRIP domain containing 6 /// RANBP2-like and GRIP domain containing 8 </td> <td> RGPD3 /// RGPD4 /// RGPD5 /// RGPD6 /// RGPD8 </td> <td> 84220 /// 285190 /// 653489 /// 727851 /// 729540 </td> <td> NM_001037866 /// NM_001123363 /// NM_001144013 /// NM_001164463 /// NM_005054 /// NM_032260 /// NM_182588 /// XM_005263747 /// XM_005263748 /// XM_005263753 /// XM_005263755 /// XM_005263756 /// XM_005263819 /// XM_005263820 /// XM_005263821 /// XM_005263822 /// XM_006712454 /// XM_006712708 /// XM_006712794 </td> <td> 0000042 // protein targeting to Golgi // inferred from electronic annotation /// 0033132 // negative regulation of glucokinase activity // inferred from electronic annotation /// 0046907 // intracellular transport // inferred from electronic annotation /// 0090526 // regulation of gluconeogenesis involved in cellular glucose homeostasis // inferred from electronic annotation </td> <td> 0005643 // nuclear pore // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008536 // Ran GTPase binding // non-traceable author statement </td> <td> -53.62 </td> <td> 305.89 </td> <td> -0.96 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 213710_s_at </td> <td> 213710_s_at </td> <td> AL523275 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL523275 /FEA=EST /DB_XREF=gi:12786768 /DB_XREF=est:AL523275 /CLONE=CS0DC001YL12 (5 prime) /UG=Hs.279009 matrix Gla protein </td> <td> AL523275 </td> <td> calmodulin 1 (phosphorylase kinase, delta) </td> <td> CALM1 </td> <td> 801 </td> <td> NM_001166106 /// NM_006888 /// XM_006720258 </td> <td>  </td> <td>  </td> <td>  </td> <td> 33.80 </td> <td> 139.40 </td> <td> 0.96 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200798_x_at </td> <td> 200798_x_at </td> <td> NM_021960 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021960.1 /DEF=Homo sapiens myeloid cell leukemia sequence 1 (BCL2-related) (MCL1), mRNA.  /FEA=mRNA /GEN=MCL1 /PROD=myeloid cell leukemia sequence 1 (BCL2-related) /DB_XREF=gi:11386164 /UG=Hs.86386 myeloid cell leukemia sequence 1 (BCL2-related) /FL=gb:NM_021960.1 gb:AF118124.1 </td> <td> NM_021960 </td> <td> myeloid cell leukemia 1 </td> <td> MCL1 </td> <td> 4170 </td> <td> NM_001197320 /// NM_021960 /// NM_182763 </td> <td> 0001709 // cell fate determination // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // not recorded /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0019725 // cellular homeostasis // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0071806 // protein transmembrane transport // traceable author statement /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype /// 0097194 // execution phase of apoptosis // inferred from direct assay /// 1900118 // negative regulation of execution phase of apoptosis // traceable author statement /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype /// 2001020 // regulation of response to DNA damage stimulus // inferred from mutant phenotype /// 2001240 // negative regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // not recorded </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // not recorded /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0097136 // Bcl-2 family protein complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015266 // protein channel activity // traceable author statement /// 0042803 // protein homodimerization activity // not recorded /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0051434 // BH3 domain binding // inferred from physical interaction </td> <td> 39.95 </td> <td> 477.80 </td> <td> 0.96 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218529_at </td> <td> 218529_at </td> <td> NM_016579 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016579.1 /DEF=Homo sapiens 8D6 antigen (LOC51293), mRNA. /FEA=mRNA /GEN=LOC51293 /PROD=8D6 antigen /DB_XREF=gi:7706110 /UG=Hs.106196 8D6 antigen /FL=gb:AL136652.1 gb:BC000668.1 gb:AF161254.1 gb:NM_016579.1 </td> <td> NM_016579 </td> <td> CD320 molecule </td> <td> CD320 </td> <td> 51293 </td> <td> NM_001165895 /// NM_016579 </td> <td> 0001558 // regulation of cell growth // non-traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0009235 // cobalamin metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0031419 // cobalamin binding // inferred from direct assay </td> <td> -16.88 </td> <td> 87.61 </td> <td> -0.96 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 203218_at </td> <td> 203218_at </td> <td> W37431 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W37431 /FEA=EST /DB_XREF=gi:1319025 /DB_XREF=est:zc11f11.s1 /CLONE=IMAGE:322029 /UG=Hs.246857 mitogen-activated protein kinase 9 /FL=gb:U34821.1 gb:NM_002752.1 gb:L31951.1 gb:U09759.1 </td> <td> W37431 </td> <td> mitogen-activated protein kinase 9 </td> <td> MAPK9 </td> <td> 5601 </td> <td> NM_001135044 /// NM_002752 /// NM_139068 /// NM_139069 /// NM_139070 /// XM_005265940 /// XM_006714891 </td> <td> 0000165 // MAPK cascade // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0007258 // JUN phosphorylation // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from mutant phenotype /// 0010770 // positive regulation of cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0014075 // response to amine // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031394 // positive regulation of prostaglandin biosynthetic process // inferred from electronic annotation /// 0031396 // regulation of protein ubiquitination // inferred from electronic annotation /// 0032308 // positive regulation of prostaglandin secretion // inferred from electronic annotation /// 0032722 // positive regulation of chemokine production // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0034644 // cellular response to UV // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051770 // positive regulation of nitric-oxide synthase biosynthetic process // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071347 // cellular response to interleukin-1 // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 2001235 // positive regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004705 // JUN kinase activity // inferred from direct assay /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation </td> <td> -21.87 </td> <td> 157.64 </td> <td> -0.96 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209045_at </td> <td> 209045_at </td> <td> AF195530 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF195530.1 /DEF=Homo sapiens soluble aminopeptidase P (XPNPEP1) mRNA, complete cds. /FEA=mRNA /GEN=XPNPEP1 /PROD=soluble aminopeptidase P /DB_XREF=gi:9739016 /UG=Hs.56542 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble /FL=gb:BC005126.1 gb:AF272981.1 gb:AF195530.1 </td> <td> AF195530 </td> <td> X-prolyl aminopeptidase (aminopeptidase P) 1, soluble </td> <td> XPNPEP1 </td> <td> 7511 </td> <td> NM_001167604 /// NM_020383 /// NR_030724 /// XM_005270144 /// XM_005270145 /// XM_006717962 /// XM_006717963 </td> <td> 0006508 // proteolysis // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0010815 // bradykinin catabolic process // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004177 // aminopeptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070006 // metalloaminopeptidase activity // inferred from direct assay </td> <td> -35.62 </td> <td> 293.31 </td> <td> -0.96 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 212953_x_at </td> <td> 212953_x_at </td> <td> BE251303 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE251303 /FEA=EST /DB_XREF=gi:9121413 /DB_XREF=est:601107814F1 /CLONE=IMAGE:3344018 /UG=Hs.16488 calreticulin </td> <td> BE251303 </td> <td> calreticulin </td> <td> CALR </td> <td> 811 </td> <td> NM_004343 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002502 // peptide antigen assembly with MHC class I protein complex // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006611 // protein export from nucleus // inferred from direct assay /// 0006874 // cellular calcium ion homeostasis // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007050 // cell cycle arrest // inferred from genetic interaction /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0017148 // negative regulation of translation // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0022417 // protein maturation by protein folding // traceable author statement /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032355 // response to estradiol // inferred from electronic annotation /// 0033144 // negative regulation of intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0033574 // response to testosterone // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0040020 // regulation of meiosis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042921 // glucocorticoid receptor signaling pathway // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045665 // negative regulation of neuron differentiation // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from genetic interaction /// 0045787 // positive regulation of cell cycle // inferred from genetic interaction /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from direct assay /// 0050766 // positive regulation of phagocytosis // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050821 // protein stabilization // traceable author statement /// 0051208 // sequestering of calcium ion // traceable author statement /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // inferred from electronic annotation /// 0071285 // cellular response to lithium ion // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0090398 // cellular senescence // inferred from genetic interaction /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from mutant phenotype /// 2000510 // positive regulation of dendritic cell chemotaxis // inferred from mutant phenotype </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005844 // polysome // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0033018 // sarcoplasmic reticulum lumen // inferred from electronic annotation /// 0042824 // MHC class I peptide loading complex // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0001849 // complement component C1q binding // traceable author statement /// 0001948 // glycoprotein binding // inferred from physical interaction /// 0003677 // DNA binding // non-traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0030246 // carbohydrate binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042277 // peptide binding // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation /// 0044183 // protein binding involved in protein folding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from direct assay /// 0051082 // unfolded protein binding // traceable author statement /// 0051087 // chaperone binding // traceable author statement </td> <td> 219.00 </td> <td> 847.12 </td> <td> 0.96 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201753_s_at </td> <td> 201753_s_at </td> <td> NM_019903 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019903.1 /DEF=Homo sapiens adducin 3 (gamma) (ADD3), transcript variant 2, mRNA. /FEA=mRNA /GEN=ADD3 /PROD=adducin 3, isoform b /DB_XREF=gi:9951926 /UG=Hs.324470 adducin 3 (gamma) /FL=gb:D67031.1 gb:NM_019903.1 </td> <td> NM_019903 </td> <td> adducin 3 (gamma) </td> <td> ADD3 </td> <td> 120 </td> <td> NM_001121 /// NM_016824 /// NM_019903 /// XM_005269529 /// XM_005269530 /// XM_005269531 /// XM_005269533 /// XM_005269534 /// XM_005269535 /// XM_006717626 /// XM_006717627 /// XM_006717628 /// XM_006717629 </td> <td>  </td> <td> 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // traceable author statement </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation </td> <td> -31.23 </td> <td> 197.41 </td> <td> -0.96 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202836_s_at </td> <td> 202836_s_at </td> <td> NM_006701 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006701.1 /DEF=Homo sapiens similar to S. pombe dim1+ (DIM1), mRNA. /FEA=mRNA /GEN=DIM1 /PROD=similar to S. pombe dim1+ /DB_XREF=gi:5729801 /UG=Hs.5074 similar to S. pombe dim1+ /FL=gb:BC001046.1 gb:AF023611.1 gb:NM_006701.1 gb:AF146373.1 </td> <td> NM_006701 </td> <td> thioredoxin-like 4A </td> <td> TXNL4A </td> <td> 10907 </td> <td> NM_006701 /// XM_005266645 </td> <td> 0000245 // spliceosomal complex assembly // traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -37.25 </td> <td> 494.98 </td> <td> -0.96 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200837_at </td> <td> 200837_at </td> <td> NM_005745 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005745.3 /DEF=Homo sapiens accessory proteins BAP31BAP29 (DXS1357E), mRNA. /FEA=mRNA /GEN=DXS1357E /PROD=accessory proteins BAP31BAP29 /DB_XREF=gi:10047078 /UG=Hs.291904 accessory proteins BAP31BAP29 /FL=gb:NM_005745.3 </td> <td> NM_005745 </td> <td> B-cell receptor-associated protein 31 </td> <td> BCAP31 </td> <td> 10134 </td> <td> NM_001139441 /// NM_001139457 /// NM_001256447 /// NM_005745 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from mutant phenotype /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032471 // negative regulation of endoplasmic reticulum calcium ion concentration // inferred from mutant phenotype /// 0035584 // calcium-mediated signaling using intracellular calcium source // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0051561 // positive regulation of mitochondrial calcium ion concentration // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 59.73 </td> <td> 390.51 </td> <td> 0.96 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 217749_at </td> <td> 217749_at </td> <td> NM_016128 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016128.1 /DEF=Homo sapiens coat protein gamma-cop (LOC51137), mRNA. /FEA=mRNA /GEN=LOC51137 /PROD=coat protein gamma-cop /DB_XREF=gi:11559928 /UG=Hs.102950 coat protein gamma-cop /FL=gb:AB047846.1 gb:NM_016128.1 gb:AF100756.1 </td> <td> NM_016128 </td> <td> coatomer protein complex, subunit gamma 1 </td> <td> COPG1 </td> <td> 22820 </td> <td> NM_016128 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0051683 // establishment of Golgi localization // inferred from sequence or structural similarity /// 0061024 // membrane organization // traceable author statement /// 0072384 // organelle transport along microtubule // inferred from sequence or structural similarity </td> <td> 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 20.28 </td> <td> 112.69 </td> <td> 0.95 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202753_at </td> <td> 202753_at </td> <td> NM_014814 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014814.1 /DEF=Homo sapiens KIAA0107 gene product (KIAA0107), mRNA. /FEA=mRNA /GEN=KIAA0107 /PROD=KIAA0107 gene product /DB_XREF=gi:7661913 /UG=Hs.23488 KIAA0107 gene product /FL=gb:BC000630.1 gb:BC000904.2 gb:D14663.1 gb:AF215935.1 gb:NM_014814.1 </td> <td> NM_014814 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 </td> <td> PSMD6 </td> <td> 9861 </td> <td> NM_001271779 /// NM_001271780 /// NM_001271781 /// NM_014814 /// XM_005265618 /// XM_005265619 /// XM_006713431 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006200 // ATP catabolic process // non-traceable author statement /// 0006508 // proteolysis // non-traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0016887 // ATPase activity // non-traceable author statement </td> <td> 59.57 </td> <td> 749.26 </td> <td> 0.95 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200718_s_at </td> <td> 200718_s_at </td> <td> AA927664 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA927664 /FEA=EST /DB_XREF=gi:3076484 /DB_XREF=est:om71h10.s1 /CLONE=IMAGE:1552675 /UG=Hs.171626 transcription elongation factor B (SIII), polypeptide 1-like /FL=gb:NM_003197.2 </td> <td> AA927664 </td> <td> S-phase kinase-associated protein 1 </td> <td> SKP1 </td> <td> 6500 </td> <td> NM_006930 /// NM_170679 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0031467 // Cul7-RING ubiquitin ligase complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 124.03 </td> <td> 1835.61 </td> <td> 0.95 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200645_at </td> <td> 200645_at </td> <td> NM_007278 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007278.1 /DEF=Homo sapiens GABA(A) receptor-associated protein (GABARAP), mRNA. /FEA=mRNA /GEN=GABARAP /PROD=GABA(A) receptor-associated protein /DB_XREF=gi:6005763 /UG=Hs.7719 GABA(A) receptor-associated protein /FL=gb:AB030711.1 gb:AF044671.1 gb:AF067171.1 gb:AF161586.1 gb:NM_007278.1 gb:AF183425.1 </td> <td> NM_007278 </td> <td> GABA(A) receptor-associated protein </td> <td> GABARAP </td> <td> 11337 </td> <td> NM_007278 </td> <td> 0000045 // autophagic vacuole assembly // not recorded /// 0000226 // microtubule cytoskeleton organization // not recorded /// 0000422 // mitochondrion degradation // not recorded /// 0006605 // protein targeting // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0032258 // CVT pathway // not recorded /// 0034727 // piecemeal microautophagy of nucleus // not recorded /// 0044805 // late nucleophagy // not recorded /// 0071211 // protein targeting to vacuole involved in autophagy // not recorded </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0000407 // pre-autophagosomal structure // not recorded /// 0000421 // autophagic vacuole membrane // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005790 // smooth endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005930 // axoneme // inferred from sequence or structural similarity /// 0012505 // endomembrane system // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // not recorded /// 0008429 // phosphatidylethanolamine binding // not recorded /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0050811 // GABA receptor binding // inferred from physical interaction </td> <td> 66.80 </td> <td> 1137.47 </td> <td> 0.95 </td> <td> 0.37 </td> <td> 0.45 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201296_s_at </td> <td> 201296_s_at </td> <td> NM_015626 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015626.1 /DEF=Homo sapiens DKFZP564A122 protein (DKFZP564A122), mRNA. /FEA=mRNA /GEN=DKFZP564A122 /PROD=DKFZP564A122 protein /DB_XREF=gi:7661595 /UG=Hs.187991 DKFZP564A122 protein /FL=gb:AF106684.1 gb:NM_015626.1 </td> <td> NM_015626 </td> <td> WD repeat and SOCS box containing 1 </td> <td> WSB1 </td> <td> 26118 </td> <td> NM_015626 /// NM_134264 /// NM_134265 /// XM_005257963 /// XR_243778 /// XR_429881 </td> <td> 0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation </td> <td> -78.67 </td> <td> 510.71 </td> <td> -0.95 </td> <td> 0.37 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 207181_s_at </td> <td> 207181_s_at </td> <td> NM_001227 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001227.1 /DEF=Homo sapiens caspase 7, apoptosis-related cysteine protease (CASP7), mRNA.  /FEA=mRNA /GEN=CASP7 /PROD=caspase 7, apoptosis-related cysteine protease /DB_XREF=gi:4502580 /UG=Hs.9216 caspase 7, apoptosis-related cysteine protease /FL=gb:U37448.1 gb:U40281.1 gb:U67319.1 gb:U67320.1 gb:NM_001227.1 </td> <td> NM_001227 </td> <td> caspase 7, apoptosis-related cysteine peptidase </td> <td> CASP7 </td> <td> 840 </td> <td> NM_001227 /// NM_001267056 /// NM_001267057 /// NM_001267058 /// NM_033338 /// NM_033339 /// NM_033340 /// XM_006718016 /// XM_006718017 /// XM_006718018 /// XM_006718019 </td> <td> 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006508 // proteolysis // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // traceable author statement /// 0009411 // response to UV // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 0097194 // execution phase of apoptosis // not recorded </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // not recorded /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0097153 // cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation </td> <td> 17.30 </td> <td> 184.65 </td> <td> 0.95 </td> <td> 0.37 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201389_at </td> <td> 201389_at </td> <td> NM_002205 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002205.1 /DEF=Homo sapiens integrin, alpha 5 (fibronectin receptor, alpha polypeptide) (ITGA5), mRNA.  /FEA=mRNA /GEN=ITGA5 /PROD=integrin alpha 5 precursor /DB_XREF=gi:4504750 /UG=Hs.149609 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) /FL=gb:NM_002205.1 </td> <td> NM_002205 </td> <td> integrin, alpha 5 (fibronectin receptor, alpha polypeptide) </td> <td> ITGA5 </td> <td> 3678 </td> <td> NM_002205 </td> <td> 0001525 // angiogenesis // traceable author statement /// 0007044 // cell-substrate junction assembly // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007157 // heterophilic cell-cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007613 // memory // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0031589 // cell-substrate adhesion // inferred from mutant phenotype /// 0033631 // cell-cell adhesion mediated by integrin // inferred from electronic annotation /// 0035313 // wound healing, spreading of epidermal cells // inferred from expression pattern /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype </td> <td> 0001726 // ruffle // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0008305 // integrin complex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0071062 // alphav-beta3 integrin-vitronectin complex // traceable author statement </td> <td> 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005161 // platelet-derived growth factor receptor binding // traceable author statement /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043184 // vascular endothelial growth factor receptor 2 binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation </td> <td> 58.10 </td> <td> 968.30 </td> <td> 0.95 </td> <td> 0.37 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 221270_s_at </td> <td> 221270_s_at </td> <td> NM_031209 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031209.1 /DEF=Homo sapiens tRNA-guanine transglycosylase (TGT), mRNA. /FEA=mRNA /GEN=TGT /PROD=tRNA-guanine transglycosylase /DB_XREF=gi:13654275 /FL=gb:NM_031209.1 </td> <td> NM_031209 </td> <td> queuine tRNA-ribosyltransferase 1 </td> <td> QTRT1 </td> <td> 81890 </td> <td> NM_031209 </td> <td> 0006400 // tRNA modification // traceable author statement /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008616 // queuosine biosynthetic process // inferred from electronic annotation /// 0008616 // queuosine biosynthetic process // inferred from sequence or structural similarity /// 0008616 // queuosine biosynthetic process // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008479 // queuine tRNA-ribosyltransferase activity // inferred from sequence or structural similarity /// 0008479 // queuine tRNA-ribosyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 11.88 </td> <td> 23.81 </td> <td> 0.95 </td> <td> 0.37 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202284_s_at </td> <td> 202284_s_at </td> <td> NM_000389 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000389.1 /DEF=Homo sapiens cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A), mRNA.  /FEA=mRNA /GEN=CDKN1A /PROD=cyclin-dependent kinase inhibitor 1A (p21,Cip1) /DB_XREF=gi:11386202 /UG=Hs.179665 cyclin-dependent kinase inhibitor 1A (p21, Cip1) /FL=gb:NM_000389.1 gb:BC000275.1 gb:BC001935.1 gb:U03106.1 gb:L26165.1 gb:L25610.1 gb:U09579.1 </td> <td> NM_000389 </td> <td> cyclin-dependent kinase inhibitor 1A (p21, Cip1) </td> <td> CDKN1A </td> <td> 1026 </td> <td> NM_000389 /// NM_001220777 /// NM_001220778 /// NM_001291549 /// NM_078467 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from mutant phenotype /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0007346 // regulation of mitotic cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009411 // response to UV // inferred from electronic annotation /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from expression pattern /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from mutant phenotype /// 0033158 // regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043068 // positive regulation of programmed cell death // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045736 // negative regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048146 // positive regulation of fibroblast proliferation // inferred from mutant phenotype /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 0071850 // mitotic cell cycle arrest // inferred from electronic annotation /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from electronic annotation /// 0090398 // cellular senescence // inferred from mutant phenotype /// 0090400 // stress-induced premature senescence // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 2000278 // regulation of DNA biosynthetic process // inferred from electronic annotation /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype </td> <td> 0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070557 // PCNA-p21 complex // inferred from direct assay </td> <td> 0004860 // protein kinase inhibitor activity // inferred from electronic annotation /// 0004861 // cyclin-dependent protein serine/threonine kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019912 // cyclin-dependent protein kinase activating kinase activity // inferred from direct assay /// 0030332 // cyclin binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 41.83 </td> <td> 468.01 </td> <td> 0.95 </td> <td> 0.37 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202101_s_at </td> <td> 202101_s_at </td> <td> NM_002881 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002881.1 /DEF=Homo sapiens v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein) (RALB), mRNA.  /FEA=mRNA /GEN=RALB /PROD=v-ral simian leukemia viral oncogene homolog B /DB_XREF=gi:4506404 /UG=Hs.250811 v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein) /FL=gb:M35416.1 gb:NM_002881.1 </td> <td> NM_002881 </td> <td> v-ral simian leukemia viral oncogene homolog B </td> <td> RALB </td> <td> 5899 </td> <td> NM_002881 /// XM_005263724 /// XM_005263727 /// XM_005263728 /// XM_005263729 </td> <td> 0000910 // cytokinesis // inferred from direct assay /// 0001928 // regulation of exocyst assembly // inferred from sequence or structural similarity /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0060178 // regulation of exocyst localization // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay </td> <td> -16.38 </td> <td> 142.41 </td> <td> -0.95 </td> <td> 0.37 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201804_x_at </td> <td> 201804_x_at </td> <td> NM_001281 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001281.1 /DEF=Homo sapiens cytoskeleton-associated protein 1 (CKAP1), mRNA. /FEA=mRNA /GEN=CKAP1 /PROD=CKAP1 /DB_XREF=gi:4502848 /UG=Hs.31053 cytoskeleton-associated protein 1 /FL=gb:AF013488.1 gb:NM_001281.1 gb:D49738.1 </td> <td> NM_001281 </td> <td> tubulin folding cofactor B </td> <td> TBCB </td> <td> 1155 </td> <td> NM_001281 /// XM_006722998 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -45.68 </td> <td> 515.29 </td> <td> -0.95 </td> <td> 0.37 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 212358_at </td> <td> 212358_at </td> <td> AL117468 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL117468.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586N1922 (from clone DKFZp586N1922); partial cds.  /FEA=mRNA /GEN=DKFZp586N1922 /PROD=hypothetical protein /DB_XREF=gi:5911934 /UG=Hs.7357 DKFZP586N1922 protein </td> <td> AL117468 </td> <td> CAP-GLY domain containing linker protein 3 </td> <td> CLIP3 </td> <td> 25999 </td> <td> NM_001199570 /// NM_015526 </td> <td> 0001934 // positive regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0010828 // positive regulation of glucose transport // inferred from sequence or structural similarity /// 0018230 // peptidyl-L-cysteine S-palmitoylation // inferred from mutant phenotype /// 0031115 // negative regulation of microtubule polymerization // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0044091 // membrane biogenesis // inferred from mutant phenotype /// 0045444 // fat cell differentiation // inferred from sequence or structural similarity /// 0045807 // positive regulation of endocytosis // inferred from mutant phenotype /// 0072321 // chaperone-mediated protein transport // inferred from mutant phenotype /// 0090004 // positive regulation of establishment of protein localization to plasma membrane // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0032588 // trans-Golgi network membrane // inferred from mutant phenotype /// 0045121 // membrane raft // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // inferred from mutant phenotype /// 0035594 // ganglioside binding // inferred from direct assay </td> <td> 23.35 </td> <td> 74.42 </td> <td> 0.95 </td> <td> 0.37 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200804_at </td> <td> 200804_at </td> <td> NM_003217 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003217.1 /DEF=Homo sapiens testis enhanced gene transcript (TEGT), mRNA. /FEA=mRNA /GEN=TEGT /PROD=testis enhanced gene transcript /DB_XREF=gi:4507432 /UG=Hs.74637 testis enhanced gene transcript (BAX inhibitor 1) /FL=gb:BC000916.1 gb:AF033095.1 gb:NM_003217.1 </td> <td> NM_003217 </td> <td> transmembrane BAX inhibitor motif containing 6 </td> <td> TMBIM6 </td> <td> 7009 </td> <td> NM_001098576 /// NM_003217 /// XM_005269126 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0032469 // endoplasmic reticulum calcium ion homeostasis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 44.42 </td> <td> 709.01 </td> <td> 0.95 </td> <td> 0.37 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200910_at </td> <td> 200910_at </td> <td> NM_005998 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005998.1 /DEF=Homo sapiens chaperonin containing TCP1, subunit 3 (gamma) (CCT3), mRNA.  /FEA=mRNA /GEN=CCT3 /PROD=chaperonin containing TCP1, subunit 3 (gamma) /DB_XREF=gi:5174726 /UG=Hs.1708 chaperonin containing TCP1, subunit 3 (gamma) /FL=gb:NM_005998.1 </td> <td> NM_005998 </td> <td> chaperonin containing TCP1, subunit 3 (gamma) /// uncharacterized LOC101927137 </td> <td> CCT3 /// LOC101927137 </td> <td> 7203 /// 101927137 </td> <td> NM_001008800 /// NM_001008883 /// NM_005998 /// NR_036564 /// NR_036565 /// XR_246167 /// XR_246168 /// XR_246169 /// XR_246170 /// XR_246171 /// XR_246172 /// XR_246173 /// XR_252798 /// XR_252799 /// XR_252800 /// XR_252801 /// XR_252802 /// XR_252803 /// XR_252804 /// XR_428788 /// XR_428789 /// XR_428790 /// XR_428791 /// XR_428792 /// XR_428793 /// XR_428794 /// XR_428795 /// XR_428796 /// XR_432624 /// XR_432625 /// XR_432626 /// XR_432627 /// XR_432628 /// XR_432629 /// XR_432630 /// XR_432631 /// XR_432632 </td> <td> 0006457 // protein folding // traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0002199 // zona pellucida receptor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 45.50 </td> <td> 1073.67 </td> <td> 0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201612_at </td> <td> 201612_at </td> <td> NM_000696 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000696.1 /DEF=Homo sapiens aldehyde dehydrogenase 9 (gamma-aminobutyraldehyde dehydrogenase, E3 isozyme) (ALDH9), mRNA.  /FEA=mRNA /GEN=ALDH9 /PROD=aldehyde dehydrogenase 9(gamma-aminobutyraldehyde dehydrogenase, E3 isozyme) /DB_XREF=gi:4502046 /UG=Hs.2533 aldehyde dehydrogenase 9 family, member A1 /FL=gb:U34252.1 gb:NM_000696.1 gb:AF172093.1 </td> <td> NM_000696 </td> <td> aldehyde dehydrogenase 9 family, member A1 </td> <td> ALDH9A1 </td> <td> 223 </td> <td> NM_000696 </td> <td> 0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006081 // cellular aldehyde metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009437 // carnitine metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042136 // neurotransmitter biosynthetic process // inferred from direct assay /// 0042445 // hormone metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045329 // carnitine biosynthetic process // inferred from electronic annotation /// 0045329 // carnitine biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004028 // 3-chloroallyl aldehyde dehydrogenase activity // traceable author statement /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019145 // aminobutyraldehyde dehydrogenase activity // inferred from direct assay /// 0033737 // 1-pyrroline dehydrogenase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043176 // amine binding // inferred from electronic annotation /// 0047105 // 4-trimethylammoniobutyraldehyde dehydrogenase activity // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 17.97 </td> <td> 187.34 </td> <td> 0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 203714_s_at </td> <td> 203714_s_at </td> <td> NM_003193 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003193.2 /DEF=Homo sapiens tubulin-specific chaperone e (TBCE), mRNA. /FEA=mRNA /GEN=TBCE /PROD=beta-tubulin cofactor E /DB_XREF=gi:6006029 /UG=Hs.32675 tubulin-specific chaperone e /FL=gb:U61232.1 gb:NM_003193.2 </td> <td> NM_003193 </td> <td> tubulin folding cofactor E </td> <td> TBCE </td> <td> 6905 </td> <td> NM_001079515 /// NM_001287801 /// NM_001287802 /// NM_003193 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007023 // post-chaperonin tubulin folding pathway // inferred from direct assay /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0014889 // muscle atrophy // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048589 // developmental growth // inferred from electronic annotation /// 0048936 // peripheral nervous system neuron axonogenesis // inferred from electronic annotation /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // traceable author statement </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0051087 // chaperone binding // traceable author statement </td> <td> 23.20 </td> <td> 141.93 </td> <td> 0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 221267_s_at </td> <td> 221267_s_at </td> <td> NM_031213 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031213.1 /DEF=Homo sapiens hypothetical protein MGC:5244, (MGC:5244), mRNA. /FEA=mRNA /GEN=MGC:5244 /PROD=hypothetical protein MGC:5244, /DB_XREF=gi:13654283 /FL=gb:NM_031213.1 </td> <td> NM_031213 </td> <td> abhydrolase domain containing 17A </td> <td> ABHD17A </td> <td> 81926 </td> <td> NM_001130111 /// NM_031213 /// XM_006722918 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -22.82 </td> <td> 277.64 </td> <td> -0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218245_at </td> <td> 218245_at </td> <td> NM_015516 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015516.1 /DEF=Homo sapiens hypothetical protein, estradiol-induced (E2IG4), mRNA. /FEA=mRNA /GEN=E2IG4 /PROD=hypothetical protein, estradiol-induced /DB_XREF=gi:7661667 /UG=Hs.8361 hypothetical protein, estradiol-induced /FL=gb:AF191019.1 gb:NM_015516.1 </td> <td> NM_015516 </td> <td> tsukushi, small leucine rich proteoglycan </td> <td> TSKU </td> <td> 25987 </td> <td> NM_001258210 /// NM_015516 /// XM_005273892 </td> <td> 0010468 // regulation of gene expression // inferred from electronic annotation /// 0021540 // corpus callosum morphogenesis // inferred from electronic annotation /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021960 // anterior commissure morphogenesis // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0061073 // ciliary body morphogenesis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 16.40 </td> <td> 59.72 </td> <td> 0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200955_at </td> <td> 200955_at </td> <td> NM_006839 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006839.1 /DEF=Homo sapiens inner membrane protein, mitochondrial (mitofilin) (IMMT), mRNA.  /FEA=mRNA /GEN=IMMT /PROD=inner membrane protein, mitochondrial(mitofilin) /DB_XREF=gi:5803114 /UG=Hs.78504 inner membrane protein, mitochondrial (mitofilin) /FL=gb:L42572.1 gb:BC002412.1 gb:D21094.1 gb:NM_006839.1 </td> <td> NM_006839 </td> <td> inner membrane protein, mitochondrial </td> <td> IMMT </td> <td> 10989 </td> <td> NM_001100169 /// NM_001100170 /// NM_006839 /// XM_005264110 /// XM_005264113 /// XM_005264114 </td> <td> 0009409 // response to cold // inferred from electronic annotation /// 0051560 // mitochondrial calcium ion homeostasis // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -17.83 </td> <td> 290.86 </td> <td> -0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 210645_s_at </td> <td> 210645_s_at </td> <td> D83077 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D83077.1 /DEF=Homo sapiens mRNA for TPRD, complete cds. /FEA=mRNA /PROD=TPRD /DB_XREF=gi:1304131 /UG=Hs.118174 tetratricopeptide repeat domain 3 /FL=gb:D83077.1 </td> <td> D83077 </td> <td> tetratricopeptide repeat domain 3 /// tetratricopeptide repeat domain 3 pseudogene 1 </td> <td> TTC3 /// TTC3P1 </td> <td> 7267 /// 286495 </td> <td> NM_001001894 /// NM_003316 /// NR_030737 /// XM_005261045 /// XM_005261046 /// XM_005261047 /// XM_005261048 /// XM_005261049 /// XM_005261050 /// XM_005261051 /// XM_005261052 /// XM_005261053 /// XM_005261054 /// XM_005261055 /// XM_005261056 /// XM_005261058 </td> <td> 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0010771 // negative regulation of cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005773 // vacuole // inferred from electronic annotation </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -16.28 </td> <td> 439.59 </td> <td> -0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209159_s_at </td> <td> 209159_s_at </td> <td> AV724216 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV724216 /FEA=EST /DB_XREF=gi:10828381 /DB_XREF=est:AV724216 /CLONE=HTBARB01 /UG=Hs.322430 NDRG family, member 4 /FL=gb:AB044944.1 gb:AL136584.1 </td> <td> AV724216 </td> <td> NDRG family member 4 </td> <td> NDRG4 </td> <td> 65009 </td> <td> NM_001130487 /// NM_001242833 /// NM_001242834 /// NM_001242835 /// NM_001242836 /// NM_020465 /// NM_022910 /// NR_040072 /// XM_006721252 /// XM_006721253 /// XM_006721254 /// XM_006721255 /// XM_006721256 /// XM_006721257 /// XM_006721258 /// XM_006721259 /// XM_006721260 /// XM_006721261 /// XM_006721262 </td> <td> 0006950 // response to stress // non-traceable author statement /// 0016049 // cell growth // non-traceable author statement /// 0030154 // cell differentiation // non-traceable author statement </td> <td> 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // inferred from electronic annotation </td> <td>  </td> <td> 18.80 </td> <td> 78.12 </td> <td> 0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 219027_s_at </td> <td> 219027_s_at </td> <td> NM_006901 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006901.1 /DEF=Homo sapiens myosin IXA (MYO9A), mRNA. /FEA=mRNA /GEN=MYO9A /PROD=myosin IXA /DB_XREF=gi:5902011 /UG=Hs.23395 myosin IXA /FL=gb:AF117888.1 gb:NM_006901.1 </td> <td> NM_006901 </td> <td> myosin IXA </td> <td> MYO9A </td> <td> 4649 </td> <td> NM_006901 /// XM_005254404 /// XM_006720539 /// XM_006720540 /// XM_006720541 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -18.97 </td> <td> 102.01 </td> <td> -0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 48030_i_at </td> <td> 48030_i_at </td> <td> H93077 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. H93077:yv05a04.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-241806 /clone_end=3' /gb=H93077 /gi=1099405 /ug=Hs.10235 /len=604 </td> <td> H93077 </td> <td> fatty acid hydroxylase domain containing 2 </td> <td> FAXDC2 </td> <td> 10826 </td> <td> NM_016348 /// NM_032385 /// XM_005268356 /// XM_005268358 /// XM_006714753 </td> <td> 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation </td> <td> -53.50 </td> <td> 628.58 </td> <td> -0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202951_at </td> <td> 202951_at </td> <td> BE048506 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE048506 /FEA=EST /DB_XREF=gi:8365559 /DB_XREF=est:hr49h06.x1 /CLONE=IMAGE:3131867 /UG=Hs.8724 serine threonine protein kinase /FL=gb:NM_007271.1 </td> <td> BE048506 </td> <td> serine/threonine kinase 38 </td> <td> STK38 </td> <td> 11329 </td> <td> NM_007271 /// XM_005248839 /// XM_006714988 /// XM_006714989 /// XM_006714990 </td> <td> 0006464 // cellular protein modification process // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 15.73 </td> <td> 122.86 </td> <td> 0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201390_s_at </td> <td> 201390_s_at </td> <td> NM_001320 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001320.1 /DEF=Homo sapiens casein kinase 2, beta polypeptide (CSNK2B), mRNA. /FEA=mRNA /GEN=CSNK2B /PROD=casein kinase 2, beta polypeptide /DB_XREF=gi:10334850 /UG=Hs.165843 casein kinase 2, beta polypeptide /FL=gb:NM_001320.1 </td> <td> NM_001320 </td> <td> casein kinase 2, beta polypeptide </td> <td> CSNK2B </td> <td> 1460 </td> <td> NM_001282385 /// NM_001320 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032927 // positive regulation of activin receptor signaling pathway // inferred from mutant phenotype /// 0033211 // adiponectin-activated signaling pathway // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043623 // cellular protein complex assembly // non-traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // non-traceable author statement /// 0051101 // regulation of DNA binding // non-traceable author statement /// 0061154 // endothelial tube morphogenesis // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005956 // protein kinase CK2 complex // non-traceable author statement /// 0031519 // PcG protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019887 // protein kinase regulator activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 31.85 </td> <td> 495.68 </td> <td> 0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202646_s_at </td> <td> 202646_s_at </td> <td> AA167775 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA167775 /FEA=EST /DB_XREF=gi:1744943 /DB_XREF=est:zq40g07.s1 /CLONE=IMAGE:632220 /UG=Hs.260523 neuroblastoma RAS viral (v-ras) oncogene homolog /FL=gb:BC005219.1 gb:NM_002524.2 </td> <td> AA167775 </td> <td> cold shock domain containing E1, RNA-binding </td> <td> CSDE1 </td> <td> 7812 </td> <td> NM_001007553 /// NM_001130523 /// NM_001242891 /// NM_001242892 /// NM_001242893 /// NM_007158 </td> <td> 0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008542 // visual learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008584 // male gonad development // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0035022 // positive regulation of Rac protein signal transduction // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0070966 // nuclear-transcribed mRNA catabolic process, no-go decay // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 34.45 </td> <td> 510.30 </td> <td> 0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 221506_s_at </td> <td> 221506_s_at </td> <td> BG258639 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG258639 /FEA=EST /DB_XREF=gi:12768455 /DB_XREF=est:602380357F1 /CLONE=IMAGE:4510766 /UG=Hs.278378 karyopherin beta 2b, transportin /FL=gb:AF019039.1 </td> <td> BG258639 </td> <td> transportin 2 </td> <td> TNPO2 </td> <td> 30000 </td> <td> NM_001136195 /// NM_001136196 /// NM_013433 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation </td> <td> 21.30 </td> <td> 157.65 </td> <td> 0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 217249_x_at </td> <td> 217249_x_at </td> <td> AC004544 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AC004544 /DEF=Homo sapiens BAC clone CTB-162B4 from 4 /FEA=CDS /DB_XREF=gi:3041843 /UG=Hs.248095 Homo sapiens BAC clone CTB-162B4 from 4 </td> <td> AC004544 </td> <td> /// cytochrome c oxidase subunit VIIa polypeptide 2 (liver) pseudogene 2 </td> <td> COX7A2P2 /// COX7A2P2 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 32.47 </td> <td> 367.99 </td> <td> 0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200998_s_at </td> <td> 200998_s_at </td> <td> AW029619 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW029619 /FEA=EST /DB_XREF=gi:5888375 /DB_XREF=est:wx14e05.x1 /CLONE=IMAGE:2543648 /UG=Hs.74368 transmembrane protein (63kD), endoplasmic reticulumGolgi intermediate compartment /FL=gb:NM_006825.1 </td> <td> AW029619 </td> <td> cytoskeleton-associated protein 4 </td> <td> CKAP4 </td> <td> 10970 </td> <td> NM_006825 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0032784 // regulation of DNA-templated transcription, elongation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 125.95 </td> <td> 947.67 </td> <td> 0.94 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 51774_s_at </td> <td> 51774_s_at </td> <td> AW014299 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AW014299:UI-H-BI0p-aax-a-07-0-UI.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-2710573 /clone_end=3' /gb=AW014299 /gi=5863056 /ug=Hs.238968 /len=391 </td> <td> AW014299 </td> <td> ubiquitin-conjugating enzyme E2D 4 (putative) </td> <td> UBE2D4 </td> <td> 51619 </td> <td> NM_015983 /// XM_005249772 /// XM_006715734 /// XM_006715735 /// XM_006715736 /// XM_006715737 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035519 // protein K29-linked ubiquitination // inferred from direct assay /// 0044314 // protein K27-linked ubiquitination // inferred from direct assay /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0085020 // protein K6-linked ubiquitination // inferred from direct assay </td> <td>  </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> 17.28 </td> <td> 312.94 </td> <td> 0.93 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 214894_x_at </td> <td> 214894_x_at </td> <td> AK023285 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK023285.1 /DEF=Homo sapiens cDNA FLJ13223 fis, clone OVARC1000001, highly similar to Homo sapiens mRNA for actin binding protein ABP620.  /FEA=mRNA /DB_XREF=gi:10435154 /UG=Hs.108258 actin binding protein; macrophin (microfilament and actin filament cross-linker protein) </td> <td> AK023285 </td> <td> microtubule-actin crosslinking factor 1 </td> <td> MACF1 </td> <td> 23499 </td> <td> NM_012090 /// NM_033044 /// XM_005270694 /// XM_005270695 /// XM_005270696 /// XM_005270697 /// XM_005270698 /// XM_005270700 /// XM_006710519 /// XM_006710520 /// XM_006710521 /// XM_006710522 /// XM_006710523 /// XM_006710524 /// XM_006710525 /// XM_006710526 /// XM_006710527 /// XM_006710528 /// XM_006710529 /// XM_006710530 /// XM_006710531 /// XM_006710532 /// XM_006710533 /// XM_006710534 /// XM_006710535 /// XM_006710536 /// XM_006710537 /// XM_006710538 /// XM_006710539 /// XM_006710540 </td> <td> 0001707 // mesoderm formation // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006620 // posttranslational protein targeting to membrane // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0010632 // regulation of epithelial cell migration // inferred from sequence or structural similarity /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay /// 0051893 // regulation of focal adhesion assembly // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // non-traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // non-traceable author statement </td> <td> -99.12 </td> <td> 516.61 </td> <td> -0.93 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201404_x_at </td> <td> 201404_x_at </td> <td> BC000268 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000268.1 /DEF=Homo sapiens, proteasome (prosome, macropain) subunit, beta type, 2, clone MGC:1664, mRNA, complete cds.  /FEA=mRNA /PROD=proteasome (prosome, macropain) subunit, betatype, 2 /DB_XREF=gi:12653014 /UG=Hs.1390 proteasome (prosome, macropain) subunit, beta type, 2 /FL=gb:BC000268.1 gb:NM_002794.1 gb:D26599.1 </td> <td> BC000268 </td> <td> proteasome (prosome, macropain) subunit, beta type, 2 </td> <td> PSMB2 </td> <td> 5690 </td> <td> NM_001199779 /// NM_001199780 /// NM_002794 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -33.20 </td> <td> 161.38 </td> <td> -0.93 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 204249_s_at </td> <td> 204249_s_at </td> <td> NM_005574 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005574.2 /DEF=Homo sapiens LIM domain only 2 (rhombotin-like 1) (LMO2), mRNA. /FEA=mRNA /GEN=LMO2 /PROD=LIM domain only 2 /DB_XREF=gi:6633806 /UG=Hs.184585 LIM domain only 2 (rhombotin-like 1) /FL=gb:NM_005574.2 </td> <td> NM_005574 </td> <td> LIM domain only 2 (rhombotin-like 1) </td> <td> LMO2 </td> <td> 4005 </td> <td> NM_001142315 /// NM_001142316 /// NM_005574 /// XM_005252920 /// XM_005252921 /// XM_006718229 </td> <td> 0007275 // multicellular organismal development // traceable author statement /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from direct assay /// 0045647 // negative regulation of erythrocyte differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001228 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from physical interaction /// 0070888 // E-box binding // inferred from direct assay </td> <td> -21.90 </td> <td> 166.05 </td> <td> -0.93 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201123_s_at </td> <td> 201123_s_at </td> <td> NM_001970 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001970.1 /DEF=Homo sapiens eukaryotic translation initiation factor 5A (EIF5A), mRNA.  /FEA=mRNA /GEN=EIF5A /PROD=eukaryotic translation initiation factor 5A /DB_XREF=gi:4503544 /UG=Hs.119140 eukaryotic translation initiation factor 5A /FL=gb:BC000751.1 gb:BC001832.1 gb:M23419.1 gb:NM_001970.1 </td> <td> NM_001970 </td> <td> eukaryotic translation initiation factor 5A </td> <td> EIF5A </td> <td> 1984 </td> <td> NM_001143760 /// NM_001143761 /// NM_001143762 /// NM_001970 /// XM_005256509 </td> <td> 0006406 // mRNA export from nucleus // inferred from mutant phenotype /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0006452 // translational frameshifting // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008612 // peptidyl-lysine modification to peptidyl-hypusine // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045901 // positive regulation of translational elongation // inferred from sequence or structural similarity /// 0045905 // positive regulation of translational termination // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005642 // annulate lamellae // inferred from direct assay /// 0005643 // nuclear pore // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from direct assay /// 0003746 // translation elongation factor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0017070 // U6 snRNA binding // inferred from direct assay /// 0043022 // ribosome binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -31.95 </td> <td> 159.30 </td> <td> -0.93 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 211026_s_at </td> <td> 211026_s_at </td> <td> BC006230 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006230.1 /DEF=Homo sapiens, lysophospholipase-like, clone MGC:10338, mRNA, complete cds.  /FEA=mRNA /PROD=lysophospholipase-like /DB_XREF=gi:13623260 /FL=gb:BC006230.1 </td> <td> BC006230 </td> <td> monoglyceride lipase </td> <td> MGLL </td> <td> 11343 </td> <td> NM_001003794 /// NM_001256585 /// NM_007283 /// XM_005247093 /// XM_005247094 </td> <td> 0006629 // lipid metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from sequence or structural similarity /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019369 // arachidonic acid metabolic process // inferred from sequence or structural similarity /// 0019433 // triglyceride catabolic process // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0036155 // acylglycerol acyl-chain remodeling // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046464 // acylglycerol catabolic process // inferred from sequence or structural similarity /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement /// 0050727 // regulation of inflammatory response // inferred from sequence or structural similarity /// 0051930 // regulation of sensory perception of pain // inferred from sequence or structural similarity /// 0060292 // long term synaptic depression // inferred from electronic annotation /// 2000124 // regulation of endocannabinoid signaling pathway // inferred from sequence or structural similarity </td> <td> 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0004622 // lysophospholipase activity // traceable author statement /// 0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0047372 // acylglycerol lipase activity // inferred from sequence or structural similarity /// 0047372 // acylglycerol lipase activity // traceable author statement </td> <td> -42.05 </td> <td> 446.48 </td> <td> -0.93 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209210_s_at </td> <td> 209210_s_at </td> <td> Z24725 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:Z24725.1 /DEF=H.sapiens mitogen inducible gene mig-2, complete CDS. /FEA=mRNA /PROD=mitogen inducible gene mig-2 /DB_XREF=gi:505032 /UG=Hs.75260 mitogen inducible 2 /FL=gb:Z24725.1 </td> <td> Z24725 </td> <td> fermitin family member 2 </td> <td> FERMT2 </td> <td> 10979 </td> <td> NM_001134999 /// NM_001135000 /// NM_006832 /// XM_005267285 /// XM_006720008 /// XM_006720009 /// XM_006720010 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007160 // cell-matrix adhesion // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007229 // integrin-mediated signaling pathway // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0033622 // integrin activation // inferred from mutant phenotype /// 0034329 // cell junction assembly // traceable author statement /// 0034446 // substrate adhesion-dependent cell spreading // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from sequence or structural similarity /// 0072657 // protein localization to membrane // inferred from sequence or structural similarity </td> <td> 0001725 // stress fiber // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from direct assay /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0031674 // I band // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation </td> <td> -44.92 </td> <td> 654.76 </td> <td> -0.93 </td> <td> 0.38 </td> <td> 0.46 </td> <td> -4.60 </td> </tr>
  <tr> <td> 208619_at </td> <td> 208619_at </td> <td> L40326 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L40326.1 /DEF=Homo sapiens Hepatitis B virus X-associated protein 1 mRNA, complete cds.  /FEA=mRNA /PROD=X-associated protein 1 /DB_XREF=gi:695361 /UG=Hs.108327 damage-specific DNA binding protein 1 (127kD) /FL=gb:U18299.1 gb:U32986.1 gb:NM_001923.2 gb:L40326.1 </td> <td> L40326 </td> <td> damage-specific DNA binding protein 1, 127kDa </td> <td> DDB1 </td> <td> 1642 </td> <td> NM_001923 </td> <td> 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0070914 // UV-damage excision repair // inferred from direct assay /// 1901990 // regulation of mitotic cell cycle phase transition // inferred from mutant phenotype </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0031464 // Cul4A-RING E3 ubiquitin ligase complex // inferred from direct assay /// 0031465 // Cul4B-RING E3 ubiquitin ligase complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0080008 // Cul4-RING E3 ubiquitin ligase complex // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003684 // damaged DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 30.23 </td> <td> 456.89 </td> <td> 0.93 </td> <td> 0.38 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202457_s_at </td> <td> 202457_s_at </td> <td> AA911231 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA911231 /FEA=EST /DB_XREF=gi:3050521 /DB_XREF=est:ol49c10.s1 /CLONE=IMAGE:1526802 /UG=Hs.272458 protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (calcineurin A alpha) /FL=gb:J05480.1 gb:L14778.1 gb:NM_000944.1 gb:AL353950.1 </td> <td> AA911231 </td> <td> protein phosphatase 3, catalytic subunit, alpha isozyme </td> <td> PPP3CA </td> <td> 5530 </td> <td> NM_000944 /// NM_001130691 /// NM_001130692 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0001915 // negative regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // non-traceable author statement /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0014883 // transition between fast and slow fiber // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0033173 // calcineurin-NFAT signaling cascade // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from direct assay /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042110 // T cell activation // traceable author statement /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005955 // calcineurin complex // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // non-traceable author statement /// 0004723 // calcium-dependent protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // non-traceable author statement /// 0008144 // drug binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from physical interaction </td> <td> -16.35 </td> <td> 212.05 </td> <td> -0.93 </td> <td> 0.38 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 213699_s_at </td> <td> 213699_s_at </td> <td> AA854017 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA854017 /FEA=EST /DB_XREF=gi:2941555 /DB_XREF=est:aj52d02.s1 /CLONE=IMAGE:1393923 /UG=Hs.74405 tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, theta polypeptide </td> <td> AA854017 </td> <td> tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta </td> <td> YWHAQ </td> <td> 10971 </td> <td> NM_006826 </td> <td> 0006605 // protein targeting // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0061024 // membrane organization // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0043234 // protein complex // inferred from physical interaction /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> 58.80 </td> <td> 1658.88 </td> <td> 0.93 </td> <td> 0.38 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218084_x_at </td> <td> 218084_x_at </td> <td> NM_014164 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014164.2 /DEF=Homo sapiens FXYD domain-containing ion transport regulator 5 (FXYD5), mRNA.  /FEA=mRNA /GEN=FXYD5 /PROD=related to ion channel /DB_XREF=gi:11612664 /UG=Hs.294135 FXYD domain-containing ion transport regulator 5 /FL=gb:NM_014164.2 gb:AF161462.1 </td> <td> NM_014164 </td> <td> FXYD domain containing ion transport regulator 5 </td> <td> FXYD5 </td> <td> 53827 </td> <td> NM_001164605 /// NM_014164 /// NM_144779 /// NR_028406 /// XM_006723245 /// XM_006723246 /// XM_006723247 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0030033 // microvillus assembly // non-traceable author statement /// 0034220 // ion transmembrane transport // inferred from electronic annotation /// 0046588 // negative regulation of calcium-dependent cell-cell adhesion // non-traceable author statement </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from direct assay /// 0005216 // ion channel activity // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from direct assay </td> <td> -33.97 </td> <td> 689.76 </td> <td> -0.93 </td> <td> 0.38 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 213865_at </td> <td> 213865_at </td> <td> AI378788 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI378788 /FEA=EST /DB_XREF=gi:4188641 /DB_XREF=est:tc67b04.x1 /CLONE=IMAGE:2069647 /UG=Hs.153445 Human mRNA for unknown product, partial cds </td> <td> AI378788 </td> <td> discoidin, CUB and LCCL domain containing 2 </td> <td> DCBLD2 </td> <td> 131566 </td> <td> NM_080927 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030522 // intracellular receptor signaling pathway // non-traceable author statement /// 0042060 // wound healing // inferred from direct assay </td> <td> 0005887 // integral component of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -16.65 </td> <td> 44.38 </td> <td> -0.92 </td> <td> 0.38 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 210110_x_at </td> <td> 210110_x_at </td> <td> AF132363 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF132363.1 /DEF=Homo sapiens hnRNP 2H9D mRNA, complete cds. /FEA=mRNA /PROD=hnRNP 2H9D /DB_XREF=gi:7739446 /UG=Hs.279681 heterogeneous nuclear ribonucleoprotein H3 (2H9) /FL=gb:AF132363.1 </td> <td> AF132363 </td> <td> heterogeneous nuclear ribonucleoprotein H3 (2H9) </td> <td> HNRNPH3 </td> <td> 3189 </td> <td> NM_012207 /// NM_021644 /// XM_005269748 /// XM_005269749 /// XM_005269751 /// XM_005269752 /// XM_005269753 /// XM_005269754 /// XM_006717816 /// XM_006717817 </td> <td> 0000398 // mRNA splicing, via spliceosome // non-traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from expression pattern </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -35.95 </td> <td> 208.47 </td> <td> -0.92 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 211535_s_at </td> <td> 211535_s_at </td> <td> M60485 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M60485.1 /DEF=Human fibroblast growth factor receptor mRNA, complete cds. /FEA=mRNA /PROD=fibroblast growth factor receptor /DB_XREF=gi:182560 /UG=Hs.748 fibroblast growth factor receptor 1 (fms-related tyrosine kinase 2, Pfeiffer syndrome) /FL=gb:M60485.1 </td> <td> M60485 </td> <td> fibroblast growth factor receptor 1 </td> <td> FGFR1 </td> <td> 2260 </td> <td> NM_001174063 /// NM_001174064 /// NM_001174065 /// NM_001174066 /// NM_001174067 /// NM_015850 /// NM_023105 /// NM_023106 /// NM_023107 /// NM_023108 /// NM_023109 /// NM_023110 /// NM_023111 /// NM_032191 /// XM_006716303 /// XM_006716304 /// XM_006716305 /// XM_006716306 /// XM_006716307 /// XM_006716308 /// XM_006716309 /// XM_006716310 /// XM_006716311 /// XM_006716312 /// XM_006716313 /// XM_006716314 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000165 // MAPK cascade // traceable author statement /// 0001501 // skeletal system development // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001759 // organ induction // inferred from electronic annotation /// 0001764 // neuron migration // traceable author statement /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010518 // positive regulation of phospholipase activity // traceable author statement /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014068 // positive regulation of phosphatidylinositol 3-kinase signaling // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0021769 // orbitofrontal cortex development // inferred from electronic annotation /// 0021847 // ventricular zone neuroblast division // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0035607 // fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042473 // outer ear morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0043009 // chordate embryonic development // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045595 // regulation of cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048339 // paraxial mesoderm development // inferred from electronic annotation /// 0048378 // regulation of lateral mesodermal cell fate specification // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048699 // generation of neurons // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // traceable author statement /// 0048762 // mesenchymal cell differentiation // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060117 // auditory receptor cell development // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060484 // lung-associated mesenchyme development // inferred from electronic annotation /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation /// 0090080 // positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 2001239 // regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> 22.70 </td> <td> 140.85 </td> <td> 0.92 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201156_s_at </td> <td> 201156_s_at </td> <td> AF141304 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF141304.1 /DEF=Homo sapiens small GTPase (RAB5C) mRNA, complete cds. /FEA=CDS /GEN=RAB5C /PROD=small GTPase /DB_XREF=gi:7672664 /UG=Hs.479 RAB5C, member RAS oncogene family /FL=gb:NM_004583.1 gb:U11293.1 gb:U18420.1 gb:AF141304.1 </td> <td> AF141304 </td> <td> RAB5C, member RAS oncogene family </td> <td> RAB5C </td> <td> 5878 </td> <td> NM_001252039 /// NM_004583 /// NM_201434 </td> <td> 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007032 // endosome organization // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay </td> <td> -24.10 </td> <td> 262.80 </td> <td> -0.92 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209251_x_at </td> <td> 209251_x_at </td> <td> BC004949 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004949.1 /DEF=Homo sapiens, tubulin alpha 6, clone MGC:10851, mRNA, complete cds. /FEA=mRNA /PROD=tubulin alpha 6 /DB_XREF=gi:13436316 /UG=Hs.272897 Tubulin, alpha, brain-specific /FL=gb:BC004949.1 </td> <td> BC004949 </td> <td> tubulin, alpha 1c </td> <td> TUBA1C </td> <td> 84790 </td> <td> NM_032704 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // traceable author statement /// 0030705 // cytoskeleton-dependent intracellular transport // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051301 // cell division // traceable author statement /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 295.98 </td> <td> 3573.49 </td> <td> 0.92 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201220_x_at </td> <td> 201220_x_at </td> <td> NM_001329 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001329.1 /DEF=Homo sapiens C-terminal binding protein 2 (CTBP2), transcript variant 1, mRNA.  /FEA=mRNA /GEN=CTBP2 /PROD=C-terminal binding protein 2, isoform 1 /DB_XREF=gi:4557498 /UG=Hs.171391 C-terminal binding protein 2 /FL=gb:AF016507.1 gb:NM_001329.1 </td> <td> NM_001329 </td> <td> C-terminal binding protein 2 </td> <td> CTBP2 </td> <td> 1488 </td> <td> NM_001083914 /// NM_001290214 /// NM_001290215 /// NM_001329 /// NM_022802 /// XM_005269561 /// XM_005269562 /// XM_005269563 /// XM_005269564 /// XM_005269565 /// XM_005269567 /// XM_005269568 /// XM_005269569 /// XM_005269570 /// XM_005269571 /// XM_005269572 /// XM_006717641 /// XM_006717642 /// XM_006717643 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 39.30 </td> <td> 577.05 </td> <td> 0.92 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 211048_s_at </td> <td> 211048_s_at </td> <td> BC006344 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006344.1 /DEF=Homo sapiens, protein disulfide isomerase related protein (calcium-binding protein, intestinal-related), clone MGC:13117, mRNA, complete cds.  /FEA=mRNA /PROD=protein disulfide isomerase related protein(calcium-binding protein, intestinal-related) /DB_XREF=gi:13623480 /FL=gb:BC006344.1 </td> <td> BC006344 </td> <td> protein disulfide isomerase family A, member 4 </td> <td> PDIA4 </td> <td> 9601 </td> <td> NM_004911 /// XM_006716185 </td> <td> 0006457 // protein folding // not recorded /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0009306 // protein secretion // traceable author statement /// 0034976 // response to endoplasmic reticulum stress // not recorded /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // inferred from sequence or structural similarity </td> <td> 0005783 // endoplasmic reticulum // not recorded /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0003756 // protein disulfide isomerase activity // not recorded /// 0003756 // protein disulfide isomerase activity // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -88.25 </td> <td> 526.17 </td> <td> -0.92 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 213287_s_at </td> <td> 213287_s_at </td> <td> X14487 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X14487 /DEF=Human gene for acidic (type I) cytokeratin 10 /FEA=mRNA /DB_XREF=gi:28316 /UG=Hs.99936 keratin 10 (epidermolytic hyperkeratosis; keratosis palmaris et plantaris) </td> <td> X14487 </td> <td> keratin 10 </td> <td> KRT10 </td> <td> 3858 </td> <td> NM_000421 /// XM_005257343 </td> <td> 0030216 // keratinocyte differentiation // inferred from expression pattern /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005882 // intermediate filament // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0045095 // keratin filament // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0030280 // structural constituent of epidermis // non-traceable author statement </td> <td> 48.08 </td> <td> 204.86 </td> <td> 0.92 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218338_at </td> <td> 218338_at </td> <td> NM_004426 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004426.1 /DEF=Homo sapiens early development regulator 1 (homolog of polyhomeotic 1) (EDR1), mRNA.  /FEA=mRNA /GEN=EDR1 /PROD=early development regulator 1 /DB_XREF=gi:11038623 /UG=Hs.305985 early development regulator 1 (homolog of polyhomeotic 1) /FL=gb:NM_004426.1 </td> <td> NM_004426 </td> <td> polyhomeotic homolog 1 (Drosophila) </td> <td> PHC1 </td> <td> 1911 </td> <td> NM_004426 /// XM_005253334 /// XM_005253336 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // traceable author statement /// 0015761 // mannose transport // inferred from electronic annotation /// 0016574 // histone ubiquitination // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation </td> <td> 0000323 // lytic vacuole // inferred from electronic annotation /// 0001739 // sex chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay /// 0035102 // PRC1 complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005537 // mannose binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015578 // mannose transmembrane transporter activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 16.68 </td> <td> 66.41 </td> <td> 0.92 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200695_at </td> <td> 200695_at </td> <td> NM_014225 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014225.1 /DEF=Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform (PPP2R1A), mRNA.  /FEA=mRNA /GEN=PPP2R1A /PROD=protein phosphatase 2 (formerly 2A), regulatorysubunit A (PR 65), alpha isoform /DB_XREF=gi:7657474 /UG=Hs.173902 protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform /FL=gb:J02902.1 gb:NM_014225.1 </td> <td> NM_014225 </td> <td> protein phosphatase 2, regulatory subunit A, alpha </td> <td> PPP2R1A </td> <td> 5518 </td> <td> NM_014225 /// NR_033500 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000188 // inactivation of MAPK activity // non-traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006275 // regulation of DNA replication // non-traceable author statement /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0006470 // protein dephosphorylation // traceable author statement /// 0006672 // ceramide metabolic process // non-traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0007059 // chromosome segregation // inferred from direct assay /// 0007084 // mitotic nuclear envelope reassembly // traceable author statement /// 0008380 // RNA splicing // non-traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010033 // response to organic substance // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019932 // second-messenger-mediated signaling // non-traceable author statement /// 0030111 // regulation of Wnt signaling pathway // non-traceable author statement /// 0030155 // regulation of cell adhesion // non-traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0040008 // regulation of growth // non-traceable author statement /// 0042518 // negative regulation of tyrosine phosphorylation of Stat3 protein // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // non-traceable author statement /// 0070262 // peptidyl-serine dephosphorylation // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // traceable author statement /// 0000775 // chromosome, centromeric region // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0015630 // microtubule cytoskeleton // non-traceable author statement /// 0016020 // membrane // non-traceable author statement </td> <td> 0003823 // antigen binding // inferred from physical interaction /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> -14.55 </td> <td> 255.28 </td> <td> -0.92 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218711_s_at </td> <td> 218711_s_at </td> <td> NM_004657 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004657.1 /DEF=Homo sapiens serum deprivation response (phosphatidylserine-binding protein) (SDPR), mRNA.  /FEA=mRNA /GEN=SDPR /PROD=serum deprivation response(phosphatidylserine-binding protein) /DB_XREF=gi:4759081 /UG=Hs.26530 serum deprivation response (phosphatidylserine-binding protein) /FL=gb:AF085481.1 gb:NM_004657.1 </td> <td> NM_004657 </td> <td> serum deprivation response </td> <td> SDPR </td> <td> 8436 </td> <td> NM_004657 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0001786 // phosphatidylserine binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation </td> <td> -28.92 </td> <td> 199.36 </td> <td> -0.92 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 210337_s_at </td> <td> 210337_s_at </td> <td> U18197 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U18197.1 /DEF=Human ATP:citrate lyase mRNA, complete cds. /FEA=mRNA /PROD=ATP:citrate lyase /DB_XREF=gi:603073 /UG=Hs.174140 ATP citrate lyase /FL=gb:U18197.1 </td> <td> U18197 </td> <td> ATP citrate lyase </td> <td> ACLY </td> <td> 47 </td> <td> NM_001096 /// NM_198830 /// XM_005257393 /// XM_005257394 /// XM_005257395 </td> <td> 0006101 // citrate metabolic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006200 // ATP catabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from direct assay /// 0015936 // coenzyme A metabolic process // traceable author statement /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0031325 // positive regulation of cellular metabolic process // traceable author statement /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044262 // cellular carbohydrate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0009346 // citrate lyase complex // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003878 // ATP citrate synthase activity // traceable author statement /// 0004775 // succinate-CoA ligase (ADP-forming) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046912 // transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation </td> <td> 26.38 </td> <td> 333.69 </td> <td> 0.92 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 205579_at </td> <td> 205579_at </td> <td> NM_000861 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000861.2 /DEF=Homo sapiens histamine receptor H1 (HRH1), mRNA. /FEA=mRNA /GEN=HRH1 /PROD=histamine receptor H1 /DB_XREF=gi:13435403 /UG=Hs.1570 histamine receptor H1 /FL=gb:NM_000861.2 gb:AF026261.1 gb:D28481.1 </td> <td> NM_000861 </td> <td> histamine receptor H1 </td> <td> HRH1 </td> <td> 3269 </td> <td> NM_000861 /// NM_001098211 /// NM_001098212 /// NM_001098213 </td> <td> 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007613 // memory // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0032962 // positive regulation of inositol trisphosphate biosynthetic process // inferred from sequence or structural similarity /// 0043114 // regulation of vascular permeability // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0048016 // inositol phosphate-mediated signaling // inferred from sequence or structural similarity /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048245 // eosinophil chemotaxis // inferred from electronic annotation /// 0071420 // cellular response to histamine // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004969 // histamine receptor activity // inferred from sequence or structural similarity </td> <td> -15.85 </td> <td> 116.55 </td> <td> -0.91 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 212764_at </td> <td> 212764_at </td> <td> AI806174 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI806174 /FEA=EST /DB_XREF=gi:5392740 /DB_XREF=est:wf06h03.x1 /CLONE=IMAGE:2349845 /UG=Hs.232068 transcription factor 8 (represses interleukin 2 expression) </td> <td> AI806174 </td> <td> uncharacterized LOC100996668 /// zinc finger E-box binding homeobox 1 </td> <td> LOC100996668 /// ZEB1 </td> <td> 6935 /// 100996668 </td> <td> NM_001128128 /// NM_001174093 /// NM_001174094 /// NM_001174095 /// NM_001174096 /// NM_030751 /// NR_024285 /// NR_024286 /// NR_024287 /// XM_005252575 /// XM_005252576 /// XM_006717497 /// XM_006717498 /// XM_006717499 /// XR_158862 /// XR_159196 /// XR_171848 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010464 // regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0033081 // regulation of T cell differentiation in thymus // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048513 // organ development // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048752 // semicircular canal morphogenesis // inferred from electronic annotation /// 0051150 // regulation of smooth muscle cell differentiation // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070888 // E-box binding // inferred from sequence or structural similarity </td> <td> -19.35 </td> <td> 611.38 </td> <td> -0.91 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 40446_at </td> <td> 40446_at </td> <td> AL021366 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AL021366:cICK0721Q.4.1 (PHD finger protein 2) (isoform 2) /cds=(215,1918) /gb=AL021366 /gi=3169115 /ug=Hs.166204 /len=2260 </td> <td> AL021366 </td> <td> PHD finger protein 1 </td> <td> PHF1 </td> <td> 5252 </td> <td> NM_002636 /// NM_024165 /// NR_027692 /// XM_006715109 /// XM_006715110 /// XM_006715111 /// XM_006726097 /// XM_006726098 /// XM_006726099 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0061086 // negative regulation of histone H3-K27 methylation // inferred from mutant phenotype /// 0061087 // positive regulation of histone H3-K27 methylation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0035098 // ESC/E(Z) complex // inferred from direct assay /// 0035861 // site of double-strand break // inferred from direct assay </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035064 // methylated histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -21.55 </td> <td> 206.75 </td> <td> -0.91 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 213179_at </td> <td> 213179_at </td> <td> BG289914 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG289914 /FEA=EST /DB_XREF=gi:13046183 /DB_XREF=est:602381329F1 /CLONE=IMAGE:4499023 /UG=Hs.293687 ESTs </td> <td> BG289914 </td> <td> RCD1 required for cell differentiation1 homolog (S. pombe) </td> <td> RQCD1 </td> <td> 9125 </td> <td> NM_001271634 /// NM_001271635 /// NM_005444 /// NR_073390 /// XM_005246942 /// XM_005246943 /// XM_006712832 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0007548 // sex differentiation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from mutant phenotype /// 2000327 // positive regulation of ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030014 // CCR4-NOT complex // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 21.48 </td> <td> 142.89 </td> <td> 0.91 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202418_at </td> <td> 202418_at </td> <td> NM_020470 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020470.1 /DEF=Homo sapiens putative transmembrane protein; homolog of yeast Golgi membrane protein Yif1p (Yip1p-interacting factor) (54TM), mRNA.  /FEA=mRNA /GEN=54TM /PROD=putative transmembrane protein; homolog of yeastGolgi membrane protein Yif1p (Yip1p-interacting factor) /DB_XREF=gi:9994168 /UG=Hs.5809 putative transmembrane protein; homolog of yeast Golgi membrane protein Yif1p (Yip1p-interacting factor) /FL=gb:BC001299.1 gb:AF004876.1 gb:NM_020470.1 </td> <td> NM_020470 </td> <td> Yip1 interacting factor homolog A (S. cerevisiae) </td> <td> YIF1A </td> <td> 10897 </td> <td> NM_020470 /// XM_005273720 /// XM_005273721 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 20.75 </td> <td> 289.30 </td> <td> 0.91 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 210149_s_at </td> <td> 210149_s_at </td> <td> AF061735 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF061735.1 /DEF=Homo sapiens clone 023e08 My032 protein mRNA, complete cds. /FEA=mRNA /PROD=My032 protein /DB_XREF=gi:12002005 /UG=Hs.307099 Homo sapiens clone 023e08 My032 protein mRNA, complete cds /FL=gb:AF061735.1 </td> <td> AF061735 </td> <td> ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d </td> <td> ATP5H </td> <td> 10476 </td> <td> NM_001003785 /// NM_006356 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator </td> <td> 21.50 </td> <td> 779.70 </td> <td> 0.91 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201979_s_at </td> <td> 201979_s_at </td> <td> NM_006247 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006247.1 /DEF=Homo sapiens protein phosphatase 5, catalytic subunit (PPP5C), mRNA.  /FEA=mRNA /GEN=PPP5C /PROD=protein phosphatase 5, catalytic subunit /DB_XREF=gi:5453957 /UG=Hs.75180 protein phosphatase 5, catalytic subunit /FL=gb:BC001970.1 gb:NM_006247.1 </td> <td> NM_006247 </td> <td> protein phosphatase 5, catalytic subunit </td> <td> PPP5C </td> <td> 5536 </td> <td> NM_001204284 /// NM_006247 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007067 // mitotic nuclear division // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043278 // response to morphine // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from sequence or structural similarity /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 11.03 </td> <td> 98.41 </td> <td> 0.91 </td> <td> 0.39 </td> <td> 0.47 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202423_at </td> <td> 202423_at </td> <td> NM_006766 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006766.1 /DEF=Homo sapiens zinc finger protein 220 (ZNF220), mRNA. /FEA=mRNA /GEN=ZNF220 /PROD=zinc finger protein 220 /DB_XREF=gi:5803097 /UG=Hs.82210 zinc finger protein 220 /FL=gb:U47742.1 gb:NM_006766.1 </td> <td> NM_006766 </td> <td> K(lysine) acetyltransferase 6A </td> <td> KAT6A </td> <td> 7994 </td> <td> NM_001099412 /// NM_001099413 /// NM_006766 /// XM_005273649 </td> <td> 0003007 // heart morphogenesis // inferred from electronic annotation /// 0006323 // DNA packaging // traceable author statement /// 0006325 // chromatin organization // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006473 // protein acetylation // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from direct assay /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0035909 // aorta morphogenesis // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0090398 // cellular senescence // inferred from mutant phenotype </td> <td> 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0070776 // MOZ/MORF histone acetyltransferase complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 19.47 </td> <td> 280.66 </td> <td> 0.91 </td> <td> 0.39 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 204150_at </td> <td> 204150_at </td> <td> NM_015136 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015136.1 /DEF=Homo sapiens KIAA0246 protein (KIAA0246), mRNA. /FEA=mRNA /GEN=KIAA0246 /PROD=KIAA0246 protein /DB_XREF=gi:12225239 /UG=Hs.301989 KIAA0246 protein /FL=gb:NM_015136.1 </td> <td> NM_015136 </td> <td> stabilin 1 </td> <td> STAB1 </td> <td> 23166 </td> <td> NM_015136 /// XM_005264973 /// XM_005264974 /// XM_005264975 /// XM_006713065 /// XM_006713066 /// XR_427261 </td> <td> 0006898 // receptor-mediated endocytosis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007267 // cell-cell signaling // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0042742 // defense response to bacterium // inferred from direct assay /// 0055114 // oxidation-reduction process // non-traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement </td> <td> 0005041 // low-density lipoprotein receptor activity // inferred from direct assay /// 0005044 // scavenger receptor activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // non-traceable author statement /// 0030169 // low-density lipoprotein particle binding // inferred from direct assay </td> <td> -42.23 </td> <td> 414.51 </td> <td> -0.91 </td> <td> 0.39 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200013_at </td> <td> 200013_at </td> <td> NM_000986 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000986.1 /DEF=Homo sapiens ribosomal protein L24 (RPL24), mRNA. /FEA=mRNA /GEN=RPL24 /PROD=ribosomal protein L24 /DB_XREF=gi:4506618 /UG=Hs.184582 ribosomal protein L24 /FL=gb:BC000690.1 gb:M94314.1 gb:NM_000986.1 </td> <td> NM_000986 </td> <td> ribosomal protein L24 </td> <td> RPL24 </td> <td> 6152 </td> <td> NM_000986 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -146.03 </td> <td> 2245.96 </td> <td> -0.91 </td> <td> 0.39 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 214902_x_at </td> <td> 214902_x_at </td> <td> AL080232 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL080232.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586A061 (from clone DKFZp586A061). /FEA=mRNA /DB_XREF=gi:5262725 /UG=Hs.220696 Homo sapiens mRNA; cDNA DKFZp586A061 (from clone DKFZp586A061) </td> <td> AL080232 </td> <td> LIM domain containing preferred translocation partner in lipoma </td> <td> LPP </td> <td> 4026 </td> <td> NM_001167671 /// NM_001167672 /// NM_005578 /// XM_005247444 /// XM_005247445 /// XM_005247446 /// XM_005247447 /// XM_005247448 /// XM_005247450 /// XM_005247451 /// XM_005247453 /// XM_006713637 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 15.05 </td> <td> 78.15 </td> <td> 0.91 </td> <td> 0.39 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202503_s_at </td> <td> 202503_s_at </td> <td> NM_014736 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014736.1 /DEF=Homo sapiens KIAA0101 gene product (KIAA0101), mRNA. /FEA=mRNA /GEN=KIAA0101 /PROD=KIAA0101 gene product /DB_XREF=gi:7661905 /UG=Hs.81892 KIAA0101 gene product /FL=gb:D14657.1 gb:NM_014736.1 </td> <td> NM_014736 </td> <td> KIAA0101 </td> <td> KIAA0101 </td> <td> 9768 </td> <td> NM_001029989 /// NM_014736 /// NR_109934 </td> <td> 0006260 // DNA replication // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009411 // response to UV // inferred from direct assay /// 0019985 // translesion synthesis // inferred from mutant phenotype /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0051726 // regulation of cell cycle // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> 48.35 </td> <td> 876.80 </td> <td> 0.91 </td> <td> 0.39 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209297_at </td> <td> 209297_at </td> <td> AF114488 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF114488.1 /DEF=Homo sapiens intersectin short isoform (ITSN) mRNA, complete cds. /FEA=mRNA /GEN=ITSN /PROD=intersectin short isoform /DB_XREF=gi:4808824 /UG=Hs.66392 intersectin 1 (SH3 domain protein) /FL=gb:AF064243.1 gb:AF114488.1 </td> <td> AF114488 </td> <td> intersectin 1 (SH3 domain protein) </td> <td> ITSN1 </td> <td> 6453 </td> <td> NM_001001132 /// NM_003024 /// XM_005261026 /// XM_005261027 /// XM_005261031 /// XR_244289 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043087 // regulation of GTPase activity // non-traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // non-traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048488 // synaptic vesicle endocytosis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019209 // kinase activator activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070064 // proline-rich region binding // inferred from physical interaction </td> <td> -24.15 </td> <td> 234.07 </td> <td> -0.91 </td> <td> 0.39 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 211456_x_at </td> <td> 211456_x_at </td> <td> AF333388 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF333388.1 /DEF=Homo sapiens metallothionein 1H-like protein mRNA, complete cds. /FEA=mRNA /PROD=metallothionein 1H-like protein /DB_XREF=gi:13310411 /UG=Hs.326774 Homo sapiens metallothionein 1H-like protein mRNA, complete cds /FL=gb:AF333388.1 </td> <td> AF333388 </td> <td> metallothionein 1H-like 1 </td> <td> MT1HL1 </td> <td> 645745 </td> <td> NM_001039954 /// NM_001276687 </td> <td>  </td> <td>  </td> <td> 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -316.65 </td> <td> 2305.62 </td> <td> -0.91 </td> <td> 0.39 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 214626_s_at </td> <td> 214626_s_at </td> <td> AK026548 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026548.1 /DEF=Homo sapiens cDNA: FLJ22895 fis, clone KAT04940. /FEA=mRNA /DB_XREF=gi:10439429 /UG=Hs.76847 KIAA0088 protein /FL=gb:AF144074.1 </td> <td> AK026548 </td> <td> glucosidase, alpha; neutral AB </td> <td> GANAB </td> <td> 23193 </td> <td> NM_001278192 /// NM_001278193 /// NM_001278194 /// NM_014610 /// NM_198334 /// NM_198335 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0017177 // glucosidase II complex // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0033919 // glucan 1,3-alpha-glucosidase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 29.58 </td> <td> 247.79 </td> <td> 0.90 </td> <td> 0.39 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 212567_s_at </td> <td> 212567_s_at </td> <td> AL523310 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL523310 /FEA=EST /DB_XREF=gi:12786803 /DB_XREF=est:AL523310 /CLONE=CS0DC001YN06 (3 prime) /UG=Hs.150580 putative translation initiation factor </td> <td> AL523310 </td> <td> microtubule-associated protein 4 </td> <td> MAP4 </td> <td> 4134 </td> <td> NM_001134364 /// NM_001134365 /// NM_002375 /// NM_030884 /// NM_030885 /// XM_005265133 /// XM_005265134 /// XM_005265135 /// XM_005265138 /// XM_005265139 /// XM_005265147 /// XM_005265155 /// XM_005265157 /// XM_005265158 /// XM_005265159 /// XM_006713140 /// XM_006713141 /// XM_006713142 /// XM_006713143 /// XM_006713144 /// XM_006713145 /// XM_006713146 /// XM_006713147 /// XM_006713148 /// XM_006713149 /// XM_006713150 /// XM_006713151 /// XM_006713152 /// XM_006713153 /// XM_006713154 /// XM_006713155 /// XM_006713156 /// XM_006713157 /// XM_006713158 /// XM_006713159 /// XM_006713160 /// XM_006713161 /// XM_006713162 /// XM_006713163 </td> <td> 0007052 // mitotic spindle organization // inferred from mutant phenotype /// 0051012 // microtubule sliding // inferred from mutant phenotype /// 0051294 // establishment of spindle orientation // inferred from genetic interaction /// 0051294 // establishment of spindle orientation // inferred from mutant phenotype /// 0051301 // cell division // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay </td> <td> 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 14.43 </td> <td> 107.11 </td> <td> 0.90 </td> <td> 0.39 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200599_s_at </td> <td> 200599_s_at </td> <td> NM_003299 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003299.1 /DEF=Homo sapiens tumor rejection antigen (gp96) 1 (TRA1), mRNA. /FEA=mRNA /GEN=TRA1 /PROD=tumor rejection antigen (gp96) 1 /DB_XREF=gi:4507676 /UG=Hs.82689 tumor rejection antigen (gp96) 1 /FL=gb:NM_003299.1 </td> <td> NM_003299 </td> <td> heat shock protein 90kDa beta (Grp94), member 1 /// microRNA 3652 </td> <td> HSP90B1 /// MIR3652 </td> <td> 7184 /// 100500842 </td> <td> NM_003299 /// NR_037425 </td> <td> 0001666 // response to hypoxia // inferred from direct assay /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // non-traceable author statement /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031247 // actin rod assembly // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051208 // sequestering of calcium ion // non-traceable author statement /// 0071318 // cellular response to ATP // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from direct assay /// 0046790 // virion binding // inferred from physical interaction /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -108.97 </td> <td> 2172.09 </td> <td> -0.90 </td> <td> 0.39 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209026_x_at </td> <td> 209026_x_at </td> <td> AF141349 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF141349.1 /DEF=Homo sapiens beta-tubulin mRNA, complete cds. /FEA=mRNA /PROD=beta-tubulin /DB_XREF=gi:4929137 /UG=Hs.179661 tubulin, beta polypeptide /FL=gb:BC000222.1 gb:BC002347.1 gb:BC001938.1 gb:AF070561.1 gb:AF070593.1 gb:AF070600.1 gb:AF141349.1 </td> <td> AF141349 </td> <td> tubulin, beta class I </td> <td> TUBB </td> <td> 203068 </td> <td> NM_001293212 /// NM_001293213 /// NM_001293214 /// NM_001293215 /// NM_001293216 /// NM_178014 /// NR_120608 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0007017 // microtubule-based process // traceable author statement /// 0009987 // cellular process // inferred from direct assay /// 0030705 // cytoskeleton-dependent intracellular transport // traceable author statement /// 0042267 // natural killer cell mediated cytotoxicity // non-traceable author statement /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051297 // centrosome organization // inferred from electronic annotation /// 0051301 // cell division // traceable author statement </td> <td> 0000242 // pericentriolar material // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005641 // nuclear envelope lumen // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0044297 // cell body // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0032794 // GTPase activating protein binding // inferred from electronic annotation /// 0042288 // MHC class I protein binding // inferred from direct assay </td> <td> 282.90 </td> <td> 2339.20 </td> <td> 0.90 </td> <td> 0.39 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 215089_s_at </td> <td> 215089_s_at </td> <td> AW409974 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW409974 /FEA=EST /DB_XREF=gi:6935515 /DB_XREF=est:fh03d12.y1 /CLONE=IMAGE:2961094 /UG=Hs.332750 Homo sapiens cDNA FLJ10100 fis, clone HEMBA1002469, moderately similar to DXS8237E PROTEIN </td> <td> AW409974 </td> <td> RNA binding motif protein 10 </td> <td> RBM10 </td> <td> 8241 </td> <td> NM_001204466 /// NM_001204467 /// NM_001204468 /// NM_005676 /// NM_152856 /// XM_005272677 /// XM_005272678 /// XM_005272679 /// XM_006724563 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0034391 // regulation of smooth muscle cell apoptotic process // inferred from electronic annotation /// 0034393 // positive regulation of smooth muscle cell apoptotic process // inferred from electronic annotation /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 21.60 </td> <td> 91.88 </td> <td> 0.90 </td> <td> 0.39 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 216450_x_at </td> <td> 216450_x_at </td> <td> AK025862 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK025862.1 /DEF=Homo sapiens cDNA: FLJ22209 fis, clone HRC01496. /FEA=mRNA /DB_XREF=gi:10438505 /UG=Hs.288528 Homo sapiens cDNA: FLJ22209 fis, clone HRC01496 </td> <td> AK025862 </td> <td> heat shock protein 90kDa beta (Grp94), member 1 </td> <td> HSP90B1 </td> <td> 7184 </td> <td> NM_003299 </td> <td> 0001666 // response to hypoxia // inferred from direct assay /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // non-traceable author statement /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031247 // actin rod assembly // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051208 // sequestering of calcium ion // non-traceable author statement /// 0071318 // cellular response to ATP // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from direct assay /// 0046790 // virion binding // inferred from physical interaction /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -29.27 </td> <td> 300.46 </td> <td> -0.90 </td> <td> 0.40 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 208755_x_at </td> <td> 208755_x_at </td> <td> BF312331 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF312331 /FEA=EST /DB_XREF=gi:11260131 /DB_XREF=est:601898862F1 /CLONE=IMAGE:4128159 /UG=Hs.181307 H3 histone, family 3A /FL=gb:M11354.1 </td> <td> BF312331 </td> <td> H3 histone, family 3A /// H3 histone, family 3A, pseudogene 4 /// H3 histone, family 3B (H3.3B) </td> <td> H3F3A /// H3F3AP4 /// H3F3B </td> <td> 3020 /// 3021 /// 440926 </td> <td> NM_002107 /// NM_005324 /// NR_002315 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype </td> <td> 0000228 // nuclear chromosome // inferred from direct assay /// 0000786 // nucleosome // inferred from electronic annotation /// 0000788 // nuclear nucleosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -89.87 </td> <td> 2038.44 </td> <td> -0.90 </td> <td> 0.40 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201177_s_at </td> <td> 201177_s_at </td> <td> NM_005499 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005499.1 /DEF=Homo sapiens SUMO-1 activating enzyme subunit 2 (UBA2), mRNA. /FEA=mRNA /GEN=UBA2 /PROD=SUMO-1 activating enzyme subunit 2 /DB_XREF=gi:4885648 /UG=Hs.4311 SUMO-1 activating enzyme subunit 2 /FL=gb:BC003153.1 gb:U35832.1 gb:AF090384.1 gb:AF079566.1 gb:AF110957.1 gb:NM_005499.1 gb:AL136905.1 </td> <td> NM_005499 </td> <td> ubiquitin-like modifier activating enzyme 2 </td> <td> UBA2 </td> <td> 10054 </td> <td> NM_005499 /// XM_005258403 /// XM_005258404 /// XM_006722962 </td> <td> 0006464 // cellular protein modification process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0016925 // protein sumoylation // traceable author statement /// 0019950 // SMT3-dependent protein catabolic process // not recorded /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0031510 // SUMO activating enzyme complex // not recorded </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008641 // small protein activating enzyme activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019948 // SUMO activating enzyme activity // inferred from direct assay /// 0019948 // SUMO activating enzyme activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> -26.18 </td> <td> 322.74 </td> <td> -0.90 </td> <td> 0.40 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 208959_s_at </td> <td> 208959_s_at </td> <td> BC005374 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005374.1 /DEF=Homo sapiens, Similar to RIKEN cDNA 1110001E24 gene, clone MGC:12490, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to RIKEN cDNA 1110001E24 gene /DB_XREF=gi:13529223 /UG=Hs.154023 KIAA0573 protein /FL=gb:BC005374.1 </td> <td> BC005374 </td> <td> endoplasmic reticulum protein 44 </td> <td> ERP44 </td> <td> 23071 </td> <td> NM_015051 </td> <td> 0006457 // protein folding // inferred from direct assay /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0009100 // glycoprotein metabolic process // inferred from direct assay /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0045454 // cell redox homeostasis // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003756 // protein disulfide isomerase activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 14.98 </td> <td> 303.26 </td> <td> 0.90 </td> <td> 0.40 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 216032_s_at </td> <td> 216032_s_at </td> <td> AF091085 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF091085.1 /DEF=Homo sapiens clone 638 unknown mRNA, complete sequence. /FEA=mRNA /PROD=unknown /DB_XREF=gi:3860007 /UG=Hs.169992 hypothetical 43.2 Kd protein </td> <td> AF091085 </td> <td> ERGIC and golgi 3 </td> <td> ERGIC3 </td> <td> 51614 </td> <td> NM_015966 /// NM_198398 /// XM_006723804 /// XM_006723805 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from direct assay /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -26.85 </td> <td> 414.85 </td> <td> -0.90 </td> <td> 0.40 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 217794_at </td> <td> 217794_at </td> <td> NM_018457 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018457.1 /DEF=Homo sapiens DKFZp564J157 protein (DKFZP564J157), mRNA. /FEA=mRNA /GEN=DKFZP564J157 /PROD=DKFZp564J157 protein /DB_XREF=gi:8922156 /UG=Hs.63042 DKFZp564J157 protein /FL=gb:AF217517.1 gb:NM_018457.1 </td> <td> NM_018457 </td> <td> proline rich 13 </td> <td> PRR13 </td> <td> 54458 </td> <td> NM_001005354 /// NM_001005355 /// NM_018457 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay </td> <td>  </td> <td> 15.17 </td> <td> 279.89 </td> <td> 0.89 </td> <td> 0.40 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200621_at </td> <td> 200621_at </td> <td> NM_004078 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004078.1 /DEF=Homo sapiens cysteine and glycine-rich protein 1 (CSRP1), mRNA. /FEA=mRNA /GEN=CSRP1 /PROD=cysteine and glycine-rich protein 1 /DB_XREF=gi:4758085 /UG=Hs.108080 cysteine and glycine-rich protein 1 /FL=gb:M33146.1 gb:NM_004078.1 </td> <td> NM_004078 </td> <td> cysteine and glycine-rich protein 1 </td> <td> CSRP1 </td> <td> 1465 </td> <td> NM_001144773 /// NM_001193570 /// NM_001193571 /// NM_001193572 /// NM_004078 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 38.57 </td> <td> 648.04 </td> <td> 0.89 </td> <td> 0.40 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200944_s_at </td> <td> 200944_s_at </td> <td> NM_004965 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004965.1 /DEF=Homo sapiens high-mobility group (nonhistone chromosomal) protein 14 (HMG14), mRNA.  /FEA=mRNA /GEN=HMG14 /PROD=high-mobility group (nonhistone chromosomal)protein 14 /DB_XREF=gi:4826757 /UG=Hs.251064 high-mobility group (nonhistone chromosomal) protein 14 /FL=gb:BC000075.1 gb:J02621.1 gb:NM_004965.1 </td> <td> NM_004965 </td> <td> high mobility group nucleosome binding domain 1 /// uncharacterized LOC101927733 </td> <td> HMGN1 /// LOC101927733 </td> <td> 3150 /// 101927733 </td> <td> NM_004965 /// XR_242845 /// XR_247614 /// XR_252852 </td> <td> 0000720 // pyrimidine dimer repair by nucleotide-excision repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from electronic annotation /// 0006325 // chromatin organization // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation /// 0010224 // response to UV-B // inferred from electronic annotation /// 0010225 // response to UV-C // inferred from electronic annotation /// 0032786 // positive regulation of DNA-templated transcription, elongation // traceable author statement /// 0040034 // regulation of development, heterochronic // inferred from electronic annotation /// 0048597 // post-embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003677 // DNA binding // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from electronic annotation </td> <td> -49.55 </td> <td> 1094.83 </td> <td> -0.89 </td> <td> 0.40 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218831_s_at </td> <td> 218831_s_at </td> <td> NM_004107 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004107.1 /DEF=Homo sapiens Fc fragment of IgG, receptor, transporter, alpha (FCGRT), mRNA.  /FEA=mRNA /GEN=FCGRT /PROD=Fc fragment of IgG, receptor, transporter,alpha /DB_XREF=gi:4758345 /UG=Hs.111903 Fc fragment of IgG, receptor, transporter, alpha /FL=gb:NM_004107.1 gb:U12255.1 </td> <td> NM_004107 </td> <td> Fc fragment of IgG, receptor, transporter, alpha </td> <td> FCGRT </td> <td> 2217 </td> <td> NM_001136019 /// NM_004107 /// XM_005258657 /// XM_006723086 </td> <td> 0002416 // IgG immunoglobulin transcytosis in epithelial cells mediated by FcRn immunoglobulin receptor // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019882 // antigen processing and presentation // not recorded /// 0038094 // Fc-gamma receptor signaling pathway // not recorded </td> <td> 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003823 // antigen binding // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0019770 // IgG receptor activity // not recorded /// 0019864 // IgG binding // inferred from direct assay /// 0030881 // beta-2-microglobulin binding // not recorded </td> <td> -19.25 </td> <td> 97.12 </td> <td> -0.89 </td> <td> 0.40 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201055_s_at </td> <td> 201055_s_at </td> <td> NM_006805 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006805.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein A0 (HNRPA0), mRNA.  /FEA=mRNA /GEN=HNRPA0 /PROD=heterogeneous nuclear ribonucleoprotein A0 /DB_XREF=gi:5803035 /UG=Hs.77492 heterogeneous nuclear ribonucleoprotein A0 /FL=gb:BC001008.1 gb:NM_006805.1 gb:U23803.1 </td> <td> NM_006805 </td> <td> heterogeneous nuclear ribonucleoprotein A0 </td> <td> HNRNPA0 </td> <td> 10949 </td> <td> NM_006805 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from sequence or structural similarity /// 0070935 // 3'-UTR-mediated mRNA stabilization // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 23.63 </td> <td> 145.49 </td> <td> 0.89 </td> <td> 0.40 </td> <td> 0.48 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218679_s_at </td> <td> 218679_s_at </td> <td> NM_016208 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016208.1 /DEF=Homo sapiens VPS28 protein (LOC51160), mRNA. /FEA=mRNA /GEN=LOC51160 /PROD=VPS28 protein /DB_XREF=gi:7705884 /UG=Hs.293441 VPS28 protein /FL=gb:AF316887.1 gb:AF182844.1 gb:NM_016208.1 </td> <td> NM_016208 </td> <td> vacuolar protein sorting 28 homolog (S. cerevisiae) </td> <td> VPS28 </td> <td> 51160 </td> <td> NM_016208 /// NM_183057 /// XM_005272323 /// XM_005272324 /// XM_005272325 /// XM_006716577 /// XM_006716578 /// XM_006716579 /// XM_006716580 /// XM_006716581 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019082 // viral protein processing // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0043162 // ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway // inferred by curator /// 0043162 // ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway // inferred from mutant phenotype /// 0061024 // membrane organization // traceable author statement /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0000813 // ESCRT I complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -26.40 </td> <td> 280.22 </td> <td> -0.89 </td> <td> 0.40 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209100_at </td> <td> 209100_at </td> <td> BC001327 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001327.1 /DEF=Homo sapiens, interferon-related developmental regulator 2, clone MGC:5552, mRNA, complete cds.  /FEA=mRNA /PROD=interferon-related developmental regulator 2 /DB_XREF=gi:12654958 /UG=Hs.315177 interferon-related developmental regulator 2 /FL=gb:BC001327.1 gb:BC001676.1 gb:NM_006764.1 </td> <td> BC001327 </td> <td> interferon-related developmental regulator 2 </td> <td> IFRD2 </td> <td> 7866 </td> <td> NM_006764 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -14.75 </td> <td> 250.10 </td> <td> -0.89 </td> <td> 0.40 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 215157_x_at </td> <td> 215157_x_at </td> <td> AI734929 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI734929 /FEA=EST /DB_XREF=gi:5056453 /DB_XREF=est:at14d04.x1 /CLONE=IMAGE:2355079 /UG=Hs.172182 poly(A)-binding protein, cytoplasmic 1 </td> <td> AI734929 </td> <td> poly(A) binding protein, cytoplasmic 1 </td> <td> PABPC1 </td> <td> 26986 </td> <td> NM_002568 /// XM_005250861 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006378 // mRNA polyadenylation // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031047 // gene silencing by RNA // inferred from sequence or structural similarity /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045727 // positive regulation of translation // traceable author statement /// 0048255 // mRNA stabilization // traceable author statement /// 0060213 // positive regulation of nuclear-transcribed mRNA poly(A) tail shortening // inferred from sequence or structural similarity /// 1900153 // positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // inferred from sequence or structural similarity /// 2000623 // negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008143 // poly(A) binding // inferred from direct assay /// 0008143 // poly(A) binding // traceable author statement /// 0008266 // poly(U) RNA binding // inferred from direct assay /// 0008494 // translation activator activity // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -155.35 </td> <td> 2219.95 </td> <td> -0.88 </td> <td> 0.40 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202231_at </td> <td> 202231_at </td> <td> NM_006360 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006360.1 /DEF=Homo sapiens dendritic cell protein (GA17), mRNA. /FEA=mRNA /GEN=GA17 /PROD=dendritic cell protein /DB_XREF=gi:5453653 /UG=Hs.69469 dendritic cell protein /FL=gb:AF277183.1 gb:AF064603.1 gb:NM_006360.1 </td> <td> NM_006360 </td> <td> eukaryotic translation initiation factor 3, subunit M </td> <td> EIF3M </td> <td> 10480 </td> <td> NM_006360 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0002183 // cytoplasmic translational initiation // not recorded /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006446 // regulation of translational initiation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation </td> <td> 0003743 // translation initiation factor activity // inferred by curator /// 0005515 // protein binding // inferred from physical interaction </td> <td> 41.20 </td> <td> 485.18 </td> <td> 0.88 </td> <td> 0.40 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 213612_x_at </td> <td> 213612_x_at </td> <td> AI800419 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI800419 /FEA=EST /DB_XREF=gi:5365891 /DB_XREF=est:tj14b09.x1 /CLONE=IMAGE:2141465 /UG=Hs.218329 hypothetical protein </td> <td> AI800419 </td> <td> neuroblastoma breakpoint family, member 10 /// neuroblastoma breakpoint family, member 12 /// neuroblastoma breakpoint family, member 14 /// neuroblastoma breakpoint family, member 15 /// neuroblastoma breakpoint family, member 20 /// neuroblastoma breakpoint family, member 8 /// neuroblastoma breakpoint family, member 9 </td> <td> NBPF10 /// NBPF12 /// NBPF14 /// NBPF15 /// NBPF20 /// NBPF8 /// NBPF9 </td> <td> 25832 /// 149013 /// 284565 /// 400818 /// 728841 /// 100132406 /// 100288142 </td> <td> NM_001037501 /// NM_001037675 /// NM_001039703 /// NM_001102663 /// NM_001170755 /// NM_001277444 /// NM_001278141 /// NM_001278267 /// NM_015383 /// NM_173638 /// NR_102404 /// NR_102405 /// XM_005245096 /// XM_005245097 /// XM_005277342 /// XM_005277343 /// XM_005277344 /// XM_005277345 /// XM_005277346 /// XM_005277347 /// XM_006710872 /// XM_006711103 /// XM_006711104 /// XM_006711179 /// XM_006711180 /// XM_006711181 /// XM_006711182 /// XM_006711265 /// XM_006711317 /// XR_254328 /// XR_426769 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -70.57 </td> <td> 832.91 </td> <td> -0.88 </td> <td> 0.40 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201705_at </td> <td> 201705_at </td> <td> NM_002811 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002811.1 /DEF=Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog) (PSMD7), mRNA.  /FEA=mRNA /GEN=PSMD7 /PROD=proteasome (prosome, macropain) 26S subunit,non-ATPase, 7 (Mov34 homolog) /DB_XREF=gi:4506230 /UG=Hs.155543 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog) /FL=gb:NM_002811.1 gb:D50063.1 </td> <td> NM_002811 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 </td> <td> PSMD7 </td> <td> 5713 </td> <td> NM_002811 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005838 // proteasome regulatory particle // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 40.55 </td> <td> 358.23 </td> <td> 0.88 </td> <td> 0.41 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 210156_s_at </td> <td> 210156_s_at </td> <td> D25547 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D25547.1 /DEF=Homo sapiens mRNA for PIMT isozyme I, complete cds. /FEA=mRNA /PROD=PIMT isozyme I /DB_XREF=gi:1332402 /UG=Hs.79137 protein-L-isoaspartate (D-aspartate) O-methyltransferase /FL=gb:D25547.1 </td> <td> D25547 </td> <td> protein-L-isoaspartate (D-aspartate) O-methyltransferase </td> <td> PCMT1 </td> <td> 5110 </td> <td> NM_001252049 /// NM_001252050 /// NM_001252051 /// NM_001252052 /// NM_001252053 /// NM_005389 </td> <td> 0006464 // cellular protein modification process // inferred from electronic annotation /// 0006479 // protein methylation // traceable author statement /// 0030091 // protein repair // traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0046498 // S-adenosylhomocysteine metabolic process // inferred from electronic annotation /// 0046500 // S-adenosylmethionine metabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004719 // protein-L-isoaspartate (D-aspartate) O-methyltransferase activity // traceable author statement /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -24.75 </td> <td> 355.95 </td> <td> -0.88 </td> <td> 0.41 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 217708_x_at </td> <td> 217708_x_at </td> <td> AI734156 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI734156 /FEA=EST /DB_XREF=gi:5055269 /DB_XREF=est:nc79d04.y5 /CLONE=IMAGE:783559 /UG=Hs.172895 ESTs </td> <td> AI734156 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -13.82 </td> <td> 25.61 </td> <td> -0.88 </td> <td> 0.41 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201272_at </td> <td> 201272_at </td> <td> NM_001628 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001628.1 /DEF=Homo sapiens aldo-keto reductase family 1, member B1 (aldose reductase) (AKR1B1), mRNA.  /FEA=mRNA /GEN=AKR1B1 /PROD=aldo-keto reductase family 1, member B1 (aldosereductase) /DB_XREF=gi:4502048 /UG=Hs.75313 aldo-keto reductase family 1, member B1 (aldose reductase) /FL=gb:BC000260.1 gb:BC005387.1 gb:J04795.1 gb:J05017.1 gb:J05474.1 gb:M34720.1 gb:NM_001628.1 </td> <td> NM_001628 </td> <td> aldo-keto reductase family 1, member B1 (aldose reductase) </td> <td> AKR1B1 </td> <td> 231 </td> <td> NM_001628 /// XM_005250234 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006700 // C21-steroid hormone biosynthetic process // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0008202 // steroid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044597 // daunorubicin metabolic process // inferred from mutant phenotype /// 0044598 // doxorubicin metabolic process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004032 // alditol:NADP+ 1-oxidoreductase activity // inferred from electronic annotation /// 0004033 // aldo-keto reductase (NADP) activity // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0043795 // glyceraldehyde oxidoreductase activity // inferred from direct assay </td> <td> -26.00 </td> <td> 618.45 </td> <td> -0.88 </td> <td> 0.41 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 216282_x_at </td> <td> 216282_x_at </td> <td> AJ224143 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AJ224143.1 /DEF=Homo sapiens mRNA variant alfa for RNA polymerase II subunit 3. /FEA=mRNA /GEN=RPB3 /PROD=RNA polymerase II subunit /DB_XREF=gi:2920708 /UG=Hs.79402 polymerase (RNA) II (DNA directed) polypeptide C (33kD) </td> <td> AJ224143 </td> <td> polymerase (RNA) II (DNA directed) polypeptide C, 33kDa </td> <td> POLR2C </td> <td> 5432 </td> <td> NM_002694 /// NM_032940 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay </td> <td> 0001055 // RNA polymerase II activity // not recorded /// 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -13.33 </td> <td> 66.34 </td> <td> -0.88 </td> <td> 0.41 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 215091_s_at </td> <td> 215091_s_at </td> <td> BE542815 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE542815 /FEA=EST /DB_XREF=gi:9771460 /DB_XREF=est:601067630F1 /CLONE=IMAGE:3453846 /UG=Hs.75113 general transcription factor IIIA </td> <td> BE542815 </td> <td> general transcription factor IIIA </td> <td> GTF3A </td> <td> 2971 </td> <td> NM_002097 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0009303 // rRNA transcription // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 34.40 </td> <td> 327.70 </td> <td> 0.88 </td> <td> 0.41 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 219221_at </td> <td> 219221_at </td> <td> NM_024724 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024724.1 /DEF=Homo sapiens hypothetical protein FLJ22332 (FLJ22332), mRNA. /FEA=mRNA /GEN=FLJ22332 /PROD=hypothetical protein FLJ22332 /DB_XREF=gi:13376033 /UG=Hs.111092 hypothetical protein FLJ22332 /FL=gb:NM_024724.1 </td> <td> NM_024724 </td> <td> zinc finger and BTB domain containing 38 </td> <td> ZBTB38 </td> <td> 253461 </td> <td> NM_001080412 /// NM_152535 /// XM_005247255 /// XM_005247256 /// XM_005247257 /// XM_005247258 /// XM_005247261 /// XM_005247262 /// XM_005247263 /// XM_006713559 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008327 // methyl-CpG binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -20.73 </td> <td> 190.41 </td> <td> -0.87 </td> <td> 0.41 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209876_at </td> <td> 209876_at </td> <td> AF124491 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF124491.1 /DEF=Homo sapiens ARF GTPase-activating protein GIT2 (KIAA0148) mRNA, complete cds.  /FEA=mRNA /GEN=KIAA0148 /PROD=ARF GTPase-activating protein GIT2 /DB_XREF=gi:4691727 /UG=Hs.57734 G protein-coupled receptor kinase-interactor 2 /FL=gb:AF124491.1 </td> <td> AF124491 </td> <td> G protein-coupled receptor kinase interacting ArfGAP 2 </td> <td> GIT2 </td> <td> 9815 </td> <td> NM_001135213 /// NM_001135214 /// NM_014776 /// NM_057169 /// NM_057170 /// NM_139201 /// XM_005253997 /// XM_005254000 /// XM_006719707 /// XM_006719708 /// XM_006719709 /// XM_006719710 /// XM_006719711 /// XM_006719712 /// XM_006719713 /// XM_006719714 </td> <td> 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td> 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045095 // keratin filament // inferred from direct assay /// 0045179 // apical cortex // inferred from direct assay </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 14.85 </td> <td> 42.05 </td> <td> 0.87 </td> <td> 0.41 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202202_s_at </td> <td> 202202_s_at </td> <td> NM_002290 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002290.2 /DEF=Homo sapiens laminin, alpha 4 (LAMA4), mRNA. /FEA=mRNA /GEN=LAMA4 /PROD=laminin, alpha 4 precursor /DB_XREF=gi:9845494 /UG=Hs.78672 laminin, alpha 4 /FL=gb:NM_002290.2 </td> <td> NM_002290 </td> <td> laminin, alpha 4 </td> <td> LAMA4 </td> <td> 3910 </td> <td> NM_001105206 /// NM_001105207 /// NM_001105208 /// NM_001105209 /// NM_002290 /// XM_005266983 /// XM_005266984 /// XM_006715480 /// XM_006715481 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007172 // signal complex assembly // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0045995 // regulation of embryonic development // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005605 // basal lamina // traceable author statement /// 0005606 // laminin-1 complex // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -15.43 </td> <td> 553.46 </td> <td> -0.87 </td> <td> 0.41 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200720_s_at </td> <td> 200720_s_at </td> <td> AL532341 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL532341 /FEA=EST /DB_XREF=gi:12795834 /DB_XREF=est:AL532341 /CLONE=CS0DM014YJ21 (5 prime) /UG=Hs.153961 ARP1 (actin-related protein 1, yeast) homolog A (centractin alpha) /FL=gb:BC000693.1 gb:NM_005736.2 </td> <td> AL532341 </td> <td> ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) </td> <td> ACTR1A </td> <td> 10121 </td> <td> NM_005736 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005869 // dynactin complex // traceable author statement /// 0005875 // microtubule associated complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> -16.42 </td> <td> 281.61 </td> <td> -0.87 </td> <td> 0.41 </td> <td> 0.49 </td> <td> -4.60 </td> </tr>
  <tr> <td> 212749_s_at </td> <td> 212749_s_at </td> <td> AI096477 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI096477 /FEA=EST /DB_XREF=gi:3445971 /DB_XREF=est:qa03c06.x1 /CLONE=IMAGE:1685674 /UG=Hs.48297 DKFZP586C1620 protein </td> <td> AI096477 </td> <td> ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase </td> <td> RCHY1 </td> <td> 25898 </td> <td> NM_001008925 /// NM_001009922 /// NM_001278536 /// NM_001278537 /// NM_001278538 /// NM_001278539 /// NM_015436 /// NR_037913 /// NR_037914 /// NR_103723 /// NR_103724 /// NR_103725 /// XM_006714174 </td> <td> 0016567 // protein ubiquitination // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0051865 // protein autoubiquitination // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0002039 // p53 binding // inferred from physical interaction /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -14.90 </td> <td> 155.45 </td> <td> -0.87 </td> <td> 0.41 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200750_s_at </td> <td> 200750_s_at </td> <td> AF054183 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF054183.1 /DEF=Homo sapiens GTP binding protein mRNA, complete cds. /FEA=mRNA /PROD=GTP binding protein /DB_XREF=gi:4092053 /UG=Hs.10842 RAN, member RAS oncogene family /FL=gb:BC000852.1 gb:BC004272.1 gb:M31469.1 gb:AF052578.1 gb:AF054183.1 gb:NM_006325.2 </td> <td> AF054183 </td> <td> RAN, member RAS oncogene family </td> <td> RAN </td> <td> 5901 </td> <td> NM_006325 /// XM_005253592 </td> <td> 0000055 // ribosomal large subunit export from nucleus // inferred from mutant phenotype /// 0000056 // ribosomal small subunit export from nucleus // inferred from mutant phenotype /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006259 // DNA metabolic process // traceable author statement /// 0006405 // RNA export from nucleus // non-traceable author statement /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007052 // mitotic spindle organization // traceable author statement /// 0007067 // mitotic nuclear division // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0034629 // cellular protein complex localization // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0000785 // chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005643 // nuclear pore // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // traceable author statement /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050681 // androgen receptor binding // non-traceable author statement </td> <td> 70.05 </td> <td> 1189.72 </td> <td> 0.87 </td> <td> 0.41 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 221482_s_at </td> <td> 221482_s_at </td> <td> BC003418 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003418.1 /DEF=Homo sapiens, cyclic AMP phosphoprotein, 19 kD, clone MGC:5468, mRNA, complete cds.  /FEA=mRNA /PROD=cyclic AMP phosphoprotein, 19 kD /DB_XREF=gi:13097335 /UG=Hs.7351 cyclic AMP phosphoprotein, 19 kD /FL=gb:BC003418.1 gb:AF084555.1 </td> <td> BC003418 </td> <td> cAMP-regulated phosphoprotein, 19kDa </td> <td> ARPP19 </td> <td> 10776 </td> <td> NM_006628 /// XM_005254132 /// XM_005254133 /// XM_005254134 /// XM_005254135 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from mutant phenotype /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0045722 // positive regulation of gluconeogenesis // inferred from direct assay /// 0046326 // positive regulation of glucose import // non-traceable author statement /// 0050790 // regulation of catalytic activity // inferred from sequence or structural similarity /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // inferred from sequence or structural similarity /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0019212 // phosphatase inhibitor activity // inferred from sequence or structural similarity /// 0051721 // protein phosphatase 2A binding // inferred from sequence or structural similarity </td> <td> -23.55 </td> <td> 184.00 </td> <td> -0.87 </td> <td> 0.41 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218350_s_at </td> <td> 218350_s_at </td> <td> NM_015895 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015895.1 /DEF=Homo sapiens geminin (LOC51053), mRNA. /FEA=mRNA /GEN=LOC51053 /PROD=geminin /DB_XREF=gi:7705681 /UG=Hs.234896 geminin /FL=gb:AF067855.1 gb:NM_015895.1 </td> <td> NM_015895 </td> <td> geminin, DNA replication inhibitor </td> <td> GMNN </td> <td> 51053 </td> <td> NM_001251989 /// NM_001251990 /// NM_001251991 /// NM_015895 /// XM_005249159 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006275 // regulation of DNA replication // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from direct assay /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0070491 // repressing transcription factor binding // inferred from electronic annotation </td> <td> 21.27 </td> <td> 151.64 </td> <td> 0.87 </td> <td> 0.41 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 205032_at </td> <td> 205032_at </td> <td> NM_002203 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002203.2 /DEF=Homo sapiens integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) (ITGA2), mRNA.  /FEA=mRNA /GEN=ITGA2 /PROD=integrin alpha 2 precursor /DB_XREF=gi:6006008 /UG=Hs.271986 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) /FL=gb:NM_002203.2 </td> <td> NM_002203 </td> <td> integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) </td> <td> ITGA2 </td> <td> 3673 </td> <td> NM_002203 /// NR_073103 /// NR_073104 /// NR_073105 /// NR_073106 /// NR_073107 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0002687 // positive regulation of leukocyte migration // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0006929 // substrate-dependent cell migration // inferred from mutant phenotype /// 0006971 // hypotonic response // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0010634 // positive regulation of epithelial cell migration // inferred from electronic annotation /// 0010694 // positive regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014075 // response to amine // inferred from electronic annotation /// 0014850 // response to muscle activity // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031346 // positive regulation of cell projection organization // inferred from electronic annotation /// 0031589 // cell-substrate adhesion // inferred from mutant phenotype /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from electronic annotation /// 0033343 // positive regulation of collagen binding // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0033627 // cell adhesion mediated by integrin // inferred from mutant phenotype /// 0038065 // collagen-activated signaling pathway // inferred from mutant phenotype /// 0042060 // wound healing // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0043589 // skin morphogenesis // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0050927 // positive regulation of positive chemotaxis // inferred from electronic annotation /// 0050966 // detection of mechanical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0051971 // positive regulation of transmission of nerve impulse // inferred from electronic annotation /// 0060100 // positive regulation of phagocytosis, engulfment // inferred from electronic annotation /// 0070365 // hepatocyte differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005925 // focal adhesion // inferred from electronic annotation /// 0008305 // integrin complex // inferred from electronic annotation /// 0009279 // cell outer membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0045178 // basal part of cell // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // traceable author statement /// 0032403 // protein complex binding // inferred from electronic annotation /// 0038064 // collagen receptor activity // inferred from mutant phenotype /// 0043236 // laminin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 15.43 </td> <td> 125.21 </td> <td> 0.87 </td> <td> 0.41 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202483_s_at </td> <td> 202483_s_at </td> <td> NM_002882 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002882.2 /DEF=Homo sapiens RAN binding protein 1 (RANBP1), mRNA. /FEA=mRNA /GEN=RANBP1 /PROD=RAN binding protein 1 /DB_XREF=gi:6382077 /UG=Hs.24763 RAN binding protein 1 /FL=gb:D38076.1 gb:NM_002882.2 </td> <td> NM_002882 </td> <td> RAN binding protein 1 </td> <td> RANBP1 </td> <td> 5902 </td> <td> NM_001278639 /// NM_001278640 /// NM_001278641 /// NM_002882 /// XM_006724287 /// XM_006724288 </td> <td> 0007051 // spindle organization // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0016032 // viral process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046604 // positive regulation of mitotic centrosome separation // inferred from electronic annotation /// 0046907 // intracellular transport // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005635 // nuclear envelope // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005813 // centrosome // inferred from electronic annotation </td> <td> 0005092 // GDP-dissociation inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0008536 // Ran GTPase binding // traceable author statement </td> <td> -37.85 </td> <td> 479.18 </td> <td> -0.87 </td> <td> 0.41 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200876_s_at </td> <td> 200876_s_at </td> <td> NM_002793 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002793.1 /DEF=Homo sapiens proteasome (prosome, macropain) subunit, beta type, 1 (PSMB1), mRNA.  /FEA=mRNA /GEN=PSMB1 /PROD=proteasome (prosome, macropain) subunit, betatype, 1 /DB_XREF=gi:4506192 /UG=Hs.75748 proteasome (prosome, macropain) subunit, beta type, 1 /FL=gb:BC000508.1 gb:NM_002793.1 </td> <td> NM_002793 </td> <td> proteasome (prosome, macropain) subunit, beta type, 1 </td> <td> PSMB1 </td> <td> 5689 </td> <td> NM_002793 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -53.27 </td> <td> 867.11 </td> <td> -0.86 </td> <td> 0.42 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 210266_s_at </td> <td> 210266_s_at </td> <td> AF220137 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF220137.1 /DEF=Homo sapiens tripartite motif protein TRIM33 beta mRNA, complete cds; alternatively spliced.  /FEA=mRNA /PROD=tripartite motif protein TRIM33 beta /DB_XREF=gi:12407442 /UG=Hs.287414 transcriptional intermediary factor 1 gamma /FL=gb:AF220137.1 </td> <td> AF220137 </td> <td> tripartite motif containing 33 </td> <td> TRIM33 </td> <td> 51592 </td> <td> NM_015906 /// NM_033020 /// XM_005270936 /// XM_005270937 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070410 // co-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction </td> <td> 17.28 </td> <td> 193.01 </td> <td> 0.86 </td> <td> 0.42 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201347_x_at </td> <td> 201347_x_at </td> <td> NM_012203 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012203.1 /DEF=Homo sapiens glyoxylate reductasehydroxypyruvate reductase (GRHPR), mRNA.  /FEA=mRNA /GEN=GRHPR /PROD=glyoxylate reductasehydroxypyruvate reductase /DB_XREF=gi:6912395 /UG=Hs.155742 glyoxylate reductasehydroxypyruvate reductase /FL=gb:AF113215.1 gb:BC000605.1 gb:BC003131.1 gb:AF146018.1 gb:AF113251.1 gb:AF134895.1 gb:NM_012203.1 </td> <td> NM_012203 </td> <td> glyoxylate reductase/hydroxypyruvate reductase </td> <td> GRHPR </td> <td> 9380 </td> <td> NM_012203 /// XM_005251631 </td> <td> 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0007588 // excretion // inferred from mutant phenotype /// 0008152 // metabolic process // non-traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043648 // dicarboxylic acid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046487 // glyoxylate metabolic process // traceable author statement /// 0051259 // protein oligomerization // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005782 // peroxisomal matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004616 // phosphogluconate dehydrogenase (decarboxylating) activity // inferred from electronic annotation /// 0008465 // glycerate dehydrogenase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016618 // hydroxypyruvate reductase activity // inferred from direct assay /// 0030267 // glyoxylate reductase (NADP) activity // inferred from direct assay /// 0030267 // glyoxylate reductase (NADP) activity // non-traceable author statement /// 0031406 // carboxylic acid binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0048037 // cofactor binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation /// 0051287 // NAD binding // traceable author statement /// 0070402 // NADPH binding // inferred from direct assay </td> <td> 13.05 </td> <td> 211.88 </td> <td> 0.86 </td> <td> 0.42 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 55081_at </td> <td> 55081_at </td> <td> W46406 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. W46406:zc31c10.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-323922 /clone_end=3' /gb=W46406 /gi=1331036 /ug=Hs.8535 /len=568 </td> <td> W46406 </td> <td> MICAL-like 1 </td> <td> MICALL1 </td> <td> 85377 </td> <td> NM_033386 /// XM_005261791 /// XM_005261792 /// XM_006724345 </td> <td> 0006612 // protein targeting to membrane // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006898 // receptor-mediated endocytosis // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0032456 // endocytic recycling // inferred from electronic annotation /// 0032458 // slow endocytic recycling // inferred from mutant phenotype /// 0036010 // protein localization to endosome // inferred from mutant phenotype /// 0097320 // membrane tubulation // inferred from direct assay /// 1990126 // retrograde transport, endosome to plasma membrane // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from direct assay /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070300 // phosphatidic acid binding // inferred from direct assay </td> <td> 15.50 </td> <td> 159.97 </td> <td> 0.86 </td> <td> 0.42 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202096_s_at </td> <td> 202096_s_at </td> <td> NM_000714 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000714.2 /DEF=Homo sapiens benzodiazapine receptor (peripheral) (BZRP), nuclear gene encoding mitochondrial protein, transcript variant PBR, mRNA.  /FEA=mRNA /GEN=BZRP /PROD=peripheral benzodiazapine receptor /DB_XREF=gi:6382068 /UG=Hs.202 benzodiazapine receptor (peripheral) /FL=gb:BC001110.1 gb:M36035.1 gb:NM_000714.2 </td> <td> NM_000714 </td> <td> translocator protein (18kDa) </td> <td> TSPO </td> <td> 706 </td> <td> NM_000714 /// NM_001256530 /// NM_001256531 /// NM_007311 /// NR_046308 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006783 // heme biosynthetic process // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // traceable author statement /// 0006821 // chloride transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008347 // glial cell migration // inferred from electronic annotation /// 0010042 // response to manganese ion // inferred from electronic annotation /// 0010266 // response to vitamin B1 // inferred from electronic annotation /// 0010940 // positive regulation of necrotic cell death // inferred from electronic annotation /// 0014012 // peripheral nervous system axon regeneration // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0032374 // regulation of cholesterol transport // traceable author statement /// 0032570 // response to progesterone // inferred from electronic annotation /// 0032720 // negative regulation of tumor necrosis factor production // inferred from electronic annotation /// 0033574 // response to testosterone // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045019 // negative regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0048265 // response to pain // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0050810 // regulation of steroid biosynthetic process // inferred from electronic annotation /// 0051901 // positive regulation of mitochondrial depolarization // inferred from electronic annotation /// 0051928 // positive regulation of calcium ion transport // inferred from electronic annotation /// 0060242 // contact inhibition // inferred from electronic annotation /// 0060252 // positive regulation of glial cell proliferation // inferred from electronic annotation /// 0060253 // negative regulation of glial cell proliferation // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071294 // cellular response to zinc ion // inferred from electronic annotation /// 0071476 // cellular hypotonic response // inferred from electronic annotation /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005497 // androgen binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0008503 // benzodiazepine receptor activity // inferred from electronic annotation /// 0015485 // cholesterol binding // traceable author statement </td> <td> 29.20 </td> <td> 695.55 </td> <td> 0.86 </td> <td> 0.42 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201419_at </td> <td> 201419_at </td> <td> NM_004656 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004656.1 /DEF=Homo sapiens BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) (BAP1), mRNA.  /FEA=mRNA /GEN=BAP1 /PROD=BRCA1 associated protein-1 (ubiquitincarboxy-terminal hydrolase) /DB_XREF=gi:4757835 /UG=Hs.106674 BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) /FL=gb:BC001596.1 gb:AF045581.1 gb:NM_004656.1 </td> <td> NM_004656 </td> <td> BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) </td> <td> BAP1 </td> <td> 8314 </td> <td> NM_004656 </td> <td> 0001558 // regulation of cell growth // inferred from mutant phenotype /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0035520 // monoubiquitinated protein deubiquitination // inferred from direct assay /// 0035522 // monoubiquitinated histone H2A deubiquitination // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from mutant phenotype /// 0071108 // protein K48-linked deubiquitination // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0035517 // PR-DUB complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // non-traceable author statement /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -12.85 </td> <td> 160.82 </td> <td> -0.86 </td> <td> 0.42 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 203712_at </td> <td> 203712_at </td> <td> NM_014878 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014878.1 /DEF=Homo sapiens KIAA0020 gene product (KIAA0020), mRNA. /FEA=mRNA /GEN=KIAA0020 /PROD=KIAA0020 gene product /DB_XREF=gi:7661865 /UG=Hs.2471 KIAA0020 gene product /FL=gb:D13645.1 gb:NM_014878.1 </td> <td> NM_014878 </td> <td> KIAA0020 </td> <td> KIAA0020 </td> <td> 9933 </td> <td> NM_001031691 /// NM_014878 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -17.77 </td> <td> 293.41 </td> <td> -0.86 </td> <td> 0.42 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 214937_x_at </td> <td> 214937_x_at </td> <td> AI924817 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI924817 /FEA=EST /DB_XREF=gi:5660781 /DB_XREF=est:wn23c11.x1 /CLONE=IMAGE:2446292 /UG=Hs.75737 pericentriolar material 1 </td> <td> AI924817 </td> <td> pericentriolar material 1 </td> <td> PCM1 </td> <td> 5108 </td> <td> NM_006197 /// XM_005273509 /// XM_005273512 /// XM_005273519 /// XM_005273520 /// XM_005273521 /// XM_006716336 /// XM_006716337 /// XM_006716338 /// XM_006716339 /// XM_006716340 /// XM_006716341 /// XM_006716342 /// XM_006716343 /// XM_006716344 /// XM_006716345 /// XM_006716346 /// XM_006716347 /// XM_006716348 /// XM_006716349 /// XM_006716350 /// XR_428310 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001838 // embryonic epithelial tube formation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007497 // posterior midgut development // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0014042 // positive regulation of neuron maturation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0022027 // interkinetic nuclear migration // inferred from sequence or structural similarity /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0031122 // cytoplasmic microtubule organization // inferred from mutant phenotype /// 0033619 // membrane protein proteolysis // inferred from direct assay /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0034453 // microtubule anchoring // inferred from sequence or structural similarity /// 0034454 // microtubule anchoring at centrosome // inferred from electronic annotation /// 0035735 // intraciliary transport involved in cilium morphogenesis // inferred from mutant phenotype /// 0035799 // ureter maturation // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0042551 // neuron maturation // inferred from electronic annotation /// 0045793 // positive regulation of cell size // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0048265 // response to pain // inferred from electronic annotation /// 0048265 // response to pain // inferred from sequence or structural similarity /// 0048484 // enteric nervous system development // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from sequence or structural similarity /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0060384 // innervation // inferred from electronic annotation /// 0061146 // Peyer's patch morphogenesis // inferred from electronic annotation /// 0061146 // Peyer's patch morphogenesis // inferred from sequence or structural similarity /// 0071300 // cellular response to retinoic acid // inferred from mutant phenotype /// 0071539 // protein localization to centrosome // inferred from sequence or structural similarity /// 0072300 // positive regulation of metanephric glomerulus development // inferred from electronic annotation /// 0072300 // positive regulation of metanephric glomerulus development // inferred from sequence or structural similarity /// 0090316 // positive regulation of intracellular protein transport // inferred from mutant phenotype /// 0097021 // lymphocyte migration into lymphoid organs // inferred from sequence or structural similarity /// 0097150 // neuronal stem cell maintenance // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement </td> <td> 0000242 // pericentriolar material // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0034451 // centriolar satellite // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity </td> <td> -14.38 </td> <td> 194.26 </td> <td> -0.85 </td> <td> 0.42 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201398_s_at </td> <td> 201398_s_at </td> <td> BC000687 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000687.1 /DEF=Homo sapiens, translocating chain-associating membrane protein, clone MGC:784, mRNA, complete cds.  /FEA=mRNA /PROD=translocating chain-associating membraneprotein /DB_XREF=gi:12653796 /UG=Hs.4147 translocating chain-associating membrane protein /FL=gb:BC000687.1 gb:NM_014294.1 </td> <td> BC000687 </td> <td> translocation associated membrane protein 1 </td> <td> TRAM1 </td> <td> 23471 </td> <td> NM_014294 </td> <td> 0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -48.98 </td> <td> 716.91 </td> <td> -0.85 </td> <td> 0.42 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201027_s_at </td> <td> 201027_s_at </td> <td> NM_015904 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015904.1 /DEF=Homo sapiens KIAA0741 gene product (IF2), mRNA. /FEA=mRNA /GEN=IF2 /PROD=translation initiation factor IF2 /DB_XREF=gi:7706231 /UG=Hs.158688 KIAA0741 gene product /FL=gb:AB018284.1 gb:AF078035.1 gb:NM_015904.1 </td> <td> NM_015904 </td> <td> eukaryotic translation initiation factor 5B </td> <td> EIF5B </td> <td> 9669 </td> <td> NM_015904 /// XM_005264075 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0006446 // regulation of translational initiation // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // non-traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 13.70 </td> <td> 169.72 </td> <td> 0.85 </td> <td> 0.42 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218826_at </td> <td> 218826_at </td> <td> NM_017515 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017515.1 /DEF=Homo sapiens novel protein (HSNOV1), mRNA. /FEA=mRNA /GEN=HSNOV1 /PROD=novel protein /DB_XREF=gi:13435132 /UG=Hs.9711 novel protein /FL=gb:NM_017515.1 </td> <td> NM_017515 </td> <td> solute carrier family 35, member F2 </td> <td> SLC35F2 </td> <td> 54733 </td> <td> NM_017515 /// XM_005271598 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 14.78 </td> <td> 358.91 </td> <td> 0.85 </td> <td> 0.42 </td> <td> 0.50 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201831_s_at </td> <td> 201831_s_at </td> <td> BE875592 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE875592 /FEA=EST /DB_XREF=gi:10324368 /DB_XREF=est:601487031F1 /CLONE=IMAGE:3889710 /UG=Hs.325948 vesicle docking protein p115 /FL=gb:D86326.1 gb:NM_003715.1 </td> <td> BE875592 </td> <td> USO1 vesicle transport factor </td> <td> USO1 </td> <td> 8615 </td> <td> NM_001290049 /// NM_003715 /// XM_006714395 /// XM_006714396 /// XM_006714397 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // not recorded /// 0006888 // ER to Golgi vesicle-mediated transport // not recorded /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0045056 // transcytosis // not recorded /// 0048193 // Golgi vesicle transport // inferred from electronic annotation /// 0048211 // Golgi vesicle docking // not recorded /// 0048280 // vesicle fusion with Golgi apparatus // inferred from electronic annotation /// 0061025 // membrane fusion // not recorded </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // not recorded /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005795 // Golgi stack // not recorded /// 0005829 // cytosol // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // not recorded /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0008565 // protein transporter activity // not recorded /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -28.00 </td> <td> 237.72 </td> <td> -0.85 </td> <td> 0.42 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 217792_at </td> <td> 217792_at </td> <td> NM_014426 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014426.1 /DEF=Homo sapiens sorting nexin 5 (SNX5), mRNA. /FEA=mRNA /GEN=SNX5 /PROD=sorting nexin 5 /DB_XREF=gi:7657598 /UG=Hs.13794 sorting nexin 5 /FL=gb:BC000100.1 gb:AF121855.1 gb:NM_014426.1 </td> <td> NM_014426 </td> <td> sorting nexin 5 </td> <td> SNX5 </td> <td> 27131 </td> <td> NM_001282454 /// NM_014426 /// NM_152227 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // not recorded /// 0006897 // endocytosis // inferred from electronic annotation /// 0006907 // pinocytosis // inferred from direct assay /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0001891 // phagocytic cup // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from direct assay /// 0031313 // extrinsic component of endosome membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0070685 // macropinocytic cup // inferred from direct assay </td> <td> 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from sequence or structural similarity </td> <td> 15.50 </td> <td> 184.40 </td> <td> 0.85 </td> <td> 0.42 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201509_at </td> <td> 201509_at </td> <td> NM_006899 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006899.1 /DEF=Homo sapiens isocitrate dehydrogenase 3 (NAD+) beta (IDH3B), mRNA. /FEA=mRNA /GEN=IDH3B /PROD=isocitrate dehydrogenase 3 (NAD+) beta /DB_XREF=gi:5901981 /UG=Hs.155410 isocitrate dehydrogenase 3 (NAD+) beta /FL=gb:BC001960.1 gb:U49283.1 gb:NM_006899.1 </td> <td> NM_006899 </td> <td> isocitrate dehydrogenase 3 (NAD+) beta </td> <td> IDH3B </td> <td> 3420 </td> <td> NM_001258384 /// NM_006899 /// NM_174855 /// NM_174856 /// XM_005260716 </td> <td> 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006102 // isocitrate metabolic process // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from electronic annotation /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004449 // isocitrate dehydrogenase (NAD+) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 12.50 </td> <td> 75.80 </td> <td> 0.85 </td> <td> 0.42 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 210011_s_at </td> <td> 210011_s_at </td> <td> BC000527 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BC000527.1 /DEF=Homo sapiens, Similar to Ewing sarcoma breakpoint region 1, clone MGC:8607, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to Ewing sarcoma breakpoint region 1 /DB_XREF=gi:12653510 /UG=Hs.129953 Ewing sarcoma breakpoint region 1 /FL=gb:BC000527.1 </td> <td> BC000527 </td> <td> EWS RNA-binding protein 1 </td> <td> EWSR1 </td> <td> 2130 </td> <td> NM_001163285 /// NM_001163286 /// NM_001163287 /// NM_005243 /// NM_013986 /// XM_005261389 /// XM_005261390 /// XM_006724166 /// XM_006724167 /// XR_430403 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -18.27 </td> <td> 167.69 </td> <td> -0.85 </td> <td> 0.42 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200872_at </td> <td> 200872_at </td> <td> NM_002966 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002966.1 /DEF=Homo sapiens S100 calcium-binding protein A10 (annexin II ligand, calpactin I, light polypeptide (p11)) (S100A10), mRNA.  /FEA=mRNA /GEN=S100A10 /PROD=S100 calcium-binding protein A10 /DB_XREF=gi:4506760 /UG=Hs.119301 S100 calcium-binding protein A10 (annexin II ligand, calpactin I, light polypeptide (p11)) /FL=gb:M81457.1 gb:M38591.1 gb:NM_002966.1 </td> <td> NM_002966 </td> <td> S100 calcium binding protein A10 </td> <td> S100A10 </td> <td> 6281 </td> <td> NM_002966 </td> <td> 0001765 // membrane raft assembly // inferred from direct assay /// 0006900 // membrane budding // inferred from direct assay /// 0032855 // positive regulation of Rac GTPase activity // inferred from mutant phenotype /// 0051099 // positive regulation of binding // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0051894 // positive regulation of focal adhesion assembly // inferred from mutant phenotype /// 0071229 // cellular response to acid // inferred from electronic annotation /// 0090002 // establishment of protein localization to plasma membrane // inferred from direct assay /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from mutant phenotype </td> <td> 0019897 // extrinsic component of plasma membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044325 // ion channel binding // inferred from physical interaction </td> <td> 44.97 </td> <td> 1333.64 </td> <td> 0.85 </td> <td> 0.42 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 215236_s_at </td> <td> 215236_s_at </td> <td> AV721177 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV721177 /FEA=EST /DB_XREF=gi:10818329 /DB_XREF=est:AV721177 /CLONE=HTBAKF08 /UG=Hs.7885 phosphatidylinositol binding clathrin assembly protein </td> <td> AV721177 </td> <td> phosphatidylinositol binding clathrin assembly protein </td> <td> PICALM </td> <td> 8301 </td> <td> NM_001008660 /// NM_001206946 /// NM_001206947 /// NM_007166 /// XM_005274322 /// XM_005274323 /// XM_005274324 /// XM_005274325 /// XM_005274326 /// XM_005274327 /// XM_005274328 /// XM_005274329 /// XM_005274330 /// XM_005274331 /// XM_005274332 /// XM_005274333 /// XM_005274334 /// XM_005274335 /// XM_005274336 /// XM_005274337 /// XM_005274338 /// XM_005274340 /// XM_006718699 /// XM_006718700 /// XM_006718701 /// XM_006718702 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from mutant phenotype /// 0016188 // synaptic vesicle maturation // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from mutant phenotype /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0032880 // regulation of protein localization // inferred from direct assay /// 0035459 // cargo loading into vesicle // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0048261 // negative regulation of receptor-mediated endocytosis // inferred from direct assay /// 0048268 // clathrin coat assembly // inferred from mutant phenotype /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from mutant phenotype /// 0072583 // clathrin-mediated endocytosis // inferred from mutant phenotype /// 0097459 // iron ion import into cell // inferred from mutant phenotype /// 1901216 // positive regulation of neuron death // inferred from mutant phenotype /// 1902004 // positive regulation of beta-amyloid formation // inferred from mutant phenotype /// 1902959 // regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process // inferred from mutant phenotype /// 1902961 // positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process // inferred from sequence or structural similarity /// 1902963 // negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // inferred from direct assay /// 0030132 // clathrin coat of coated pit // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from sequence or structural similarity /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0097418 // neurofibrillary tangle // inferred from mutant phenotype </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from sequence or structural similarity /// 0030276 // clathrin binding // inferred from direct assay /// 0030276 // clathrin binding // inferred from physical interaction /// 0030276 // clathrin binding // inferred from sequence or structural similarity /// 0032050 // clathrin heavy chain binding // inferred from direct assay /// 0035615 // clathrin adaptor activity // inferred from mutant phenotype </td> <td> -26.47 </td> <td> 255.46 </td> <td> -0.84 </td> <td> 0.42 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218576_s_at </td> <td> 218576_s_at </td> <td> NM_007240 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007240.1 /DEF=Homo sapiens dual specificity phosphatase 12 (DUSP12), mRNA. /FEA=mRNA /GEN=DUSP12 /PROD=dual specificity phosphatase 12 /DB_XREF=gi:6005955 /UG=Hs.44229 dual specificity phosphatase 12 /FL=gb:AF119226.1 gb:NM_007240.1 </td> <td> NM_007240 </td> <td> dual specificity phosphatase 12 </td> <td> DUSP12 </td> <td> 11266 </td> <td> NM_007240 /// XM_005244862 </td> <td> 0006464 // cellular protein modification process // traceable author statement /// 0006470 // protein dephosphorylation // not recorded /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0033133 // positive regulation of glucokinase activity // not recorded /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0008270 // zinc ion binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 15.05 </td> <td> 101.58 </td> <td> 0.84 </td> <td> 0.43 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 212952_at </td> <td> 212952_at </td> <td> AA910371 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA910371 /FEA=EST /DB_XREF=gi:3049661 /DB_XREF=est:ok83h10.s1 /CLONE=IMAGE:1520611 /UG=Hs.16488 calreticulin </td> <td> AA910371 </td> <td>  </td> <td> CTC-425F1.4 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -135.63 </td> <td> 468.16 </td> <td> -0.84 </td> <td> 0.43 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 208749_x_at </td> <td> 208749_x_at </td> <td> AF085357 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF085357.1 /DEF=Homo sapiens flotillin mRNA, complete cds. /FEA=mRNA /PROD=flotillin /DB_XREF=gi:5114048 /UG=Hs.179986 flotillin 1 /FL=gb:BC001146.1 gb:AF085357.1 gb:AF089750.2 gb:NM_005803.2 </td> <td> AF085357 </td> <td> flotillin 1 </td> <td> FLOT1 </td> <td> 10211 </td> <td> NM_005803 /// XM_005248780 /// XM_005248781 /// XM_005272759 /// XM_005272760 /// XM_005274909 /// XM_005274910 /// XM_005275335 /// XM_005275336 /// XM_005275502 /// XM_005275503 /// XM_006714947 /// XM_006725465 /// XM_006725672 /// XM_006725971 /// XM_006726072 </td> <td> 0007409 // axonogenesis // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // inferred from mutant phenotype /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0072659 // protein localization to plasma membrane // inferred from electronic annotation /// 0090002 // establishment of protein localization to plasma membrane // inferred from mutant phenotype </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // traceable author statement /// 0008180 // COP9 signalosome // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0016600 // flotillin complex // inferred from electronic annotation /// 0034451 // centriolar satellite // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation </td> <td> -39.45 </td> <td> 515.40 </td> <td> -0.84 </td> <td> 0.43 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201625_s_at </td> <td> 201625_s_at </td> <td> BE300521 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE300521 /FEA=EST /DB_XREF=gi:9184269 /DB_XREF=est:ba69f11.x1 /CLONE=IMAGE:2905677 /UG=Hs.56205 insulin induced gene 1 /FL=gb:NM_005542.1 </td> <td> BE300521 </td> <td> insulin induced gene 1 </td> <td> INSIG1 </td> <td> 3638 </td> <td> NM_005542 /// NM_198336 /// NM_198337 /// XM_005249542 /// XM_005249543 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006991 // response to sterol depletion // inferred from electronic annotation /// 0008152 // metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010894 // negative regulation of steroid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0032933 // SREBP signaling pathway // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045717 // negative regulation of fatty acid biosynthetic process // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060363 // cranial suture morphogenesis // inferred from electronic annotation /// 1901303 // negative regulation of cargo loading into COPII-coated vesicle // inferred from mutant phenotype </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032937 // SREBP-SCAP-Insig complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -22.50 </td> <td> 109.10 </td> <td> -0.84 </td> <td> 0.43 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209895_at </td> <td> 209895_at </td> <td> AF119855 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF119855.1 /DEF=Homo sapiens PRO1847 mRNA, complete cds. /FEA=mRNA /PROD=PRO1847 /DB_XREF=gi:7770146 /UG=Hs.285196 hypothetical protein PRO1847 /FL=gb:AF119855.1 </td> <td> AF119855 </td> <td> protein tyrosine phosphatase, non-receptor type 11 </td> <td> PTPN11 </td> <td> 5781 </td> <td> NM_002834 /// NM_080601 /// XM_006719526 /// XM_006719527 </td> <td> 0000077 // DNA damage checkpoint // inferred from electronic annotation /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from mutant phenotype /// 0007507 // heart development // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009755 // hormone-mediated signaling pathway // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from mutant phenotype /// 0035265 // organ growth // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from mutant phenotype /// 0036302 // atrioventricular canal development // inferred from mutant phenotype /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038127 // ERBB signaling pathway // inferred from direct assay /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0046825 // regulation of protein export from nucleus // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0046888 // negative regulation of hormone secretion // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048609 // multicellular organismal reproductive process // inferred from electronic annotation /// 0048806 // genitalia development // inferred from mutant phenotype /// 0048839 // inner ear development // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0051463 // negative regulation of cortisol secretion // inferred from electronic annotation /// 0060125 // negative regulation of growth hormone secretion // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from mutant phenotype /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement /// 2001275 // positive regulation of glucose import in response to insulin stimulus // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // inferred from mutant phenotype /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // traceable author statement /// 0005070 // SH3/SH2 adaptor activity // inferred from direct assay /// 0005158 // insulin receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation /// 0031748 // D1 dopamine receptor binding // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation /// 0051428 // peptide hormone receptor binding // inferred from electronic annotation </td> <td> -19.35 </td> <td> 148.15 </td> <td> -0.84 </td> <td> 0.43 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201317_s_at </td> <td> 201317_s_at </td> <td> NM_002787 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002787.1 /DEF=Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 2 (PSMA2), mRNA.  /FEA=mRNA /GEN=PSMA2 /PROD=proteasome (prosome, macropain) subunit, alphatype, 2 /DB_XREF=gi:4506180 /UG=Hs.181309 proteasome (prosome, macropain) subunit, alpha type, 2 /FL=gb:NM_002787.1 </td> <td> NM_002787 </td> <td> proteasome (prosome, macropain) subunit, alpha type, 2 </td> <td> PSMA2 </td> <td> 5683 </td> <td> NM_002787 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 51.10 </td> <td> 706.55 </td> <td> 0.84 </td> <td> 0.43 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 210527_x_at </td> <td> 210527_x_at </td> <td> L11645 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L11645.1 /DEF=Homo sapiens alpha-tubulin mRNA, complete cds. /FEA=mRNA /PROD=alpha-tubulin /DB_XREF=gi:306450 /UG=Hs.98102 tubulin, alpha 2 /FL=gb:L11645.1 </td> <td> L11645 </td> <td> tubulin, alpha 3c /// tubulin, alpha 3d </td> <td> TUBA3C /// TUBA3D </td> <td> 7278 /// 113457 </td> <td> NM_006001 /// NM_079836 /// NM_080386 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 15.43 </td> <td> 120.34 </td> <td> 0.83 </td> <td> 0.43 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 217673_x_at </td> <td> 217673_x_at </td> <td> AA650558 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA650558 /FEA=EST /DB_XREF=gi:2577886 /DB_XREF=est:nt02g10.s1 /CLONE=IMAGE:1192002 /UG=Hs.325202 ESTs, Highly similar to GBAS_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(S), ALPHA SUBUNIT H.sapiens </td> <td> AA650558 </td> <td> GNAS complex locus </td> <td> GNAS </td> <td> 2778 </td> <td> NM_000516 /// NM_001077488 /// NM_001077489 /// NM_001077490 /// NM_016592 /// NM_080425 /// NM_080426 /// NR_003259 /// XM_005260401 /// XM_005260402 /// XM_006723781 /// XM_006723782 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // not recorded /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007565 // female pregnancy // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007606 // sensory perception of chemical stimulus // not recorded /// 0007608 // sensory perception of smell // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0009306 // protein secretion // non-traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040015 // negative regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040032 // post-embryonic body morphogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043950 // positive regulation of cAMP-mediated signaling // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0046907 // intracellular transport // non-traceable author statement /// 0048589 // developmental growth // inferred from direct assay /// 0048589 // developmental growth // inferred from mutant phenotype /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050890 // cognition // inferred from direct assay /// 0050890 // cognition // inferred from mutant phenotype /// 0051216 // cartilage development // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060348 // bone development // inferred from direct assay /// 0060348 // bone development // inferred from mutant phenotype /// 0060789 // hair follicle placode formation // inferred from direct assay /// 0060789 // hair follicle placode formation // inferred from mutant phenotype /// 0070527 // platelet aggregation // inferred from direct assay /// 0070527 // platelet aggregation // inferred from mutant phenotype /// 0071107 // response to parathyroid hormone // inferred from mutant phenotype /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071514 // genetic imprinting // inferred from electronic annotation /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity /// 0071880 // adenylate cyclase-activating adrenergic receptor signaling pathway // inferred from direct assay </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from sequence or structural similarity /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031224 // intrinsic component of membrane // inferred from direct assay /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // not recorded /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004016 // adenylate cyclase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from direct assay /// 0005159 // insulin-like growth factor receptor binding //  /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0031698 // beta-2 adrenergic receptor binding //  /// 0031748 // D1 dopamine receptor binding //  /// 0031852 // mu-type opioid receptor binding // not recorded /// 0035255 // ionotropic glutamate receptor binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051430 // corticotropin-releasing hormone receptor 1 binding // </td> <td> 12.13 </td> <td> 161.09 </td> <td> 0.83 </td> <td> 0.43 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201584_s_at </td> <td> 201584_s_at </td> <td> NM_005804 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005804.1 /DEF=Homo sapiens nuclear RNA helicase, DECD variant of DEAD box family (DDXL), mRNA.  /FEA=mRNA /GEN=DDXL /PROD=nuclear RNA helicase, DECD variant of DEAD boxfamily /DB_XREF=gi:5031658 /UG=Hs.179606 nuclear RNA helicase, DECD variant of DEAD box family /FL=gb:BC001009.1 gb:U90426.1 gb:NM_005804.1 </td> <td> NM_005804 </td> <td> DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A </td> <td> DDX39A </td> <td> 10212 </td> <td> NM_001204057 /// NM_005804 /// NM_138998 /// NR_038336 /// NR_046366 /// XM_006722606 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred from genetic interaction /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from genetic interaction /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -35.90 </td> <td> 459.02 </td> <td> -0.83 </td> <td> 0.43 </td> <td> 0.51 </td> <td> -4.60 </td> </tr>
  <tr> <td> 204090_at </td> <td> 204090_at </td> <td> NM_004197 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004197.1 /DEF=Homo sapiens serinethreonine kinase 19 (STK19), mRNA. /FEA=mRNA /GEN=STK19 /PROD=serinethreonine kinase 19 /DB_XREF=gi:4759179 /UG=Hs.444 serinethreonine kinase 19 /FL=gb:L26260.1 gb:NM_004197.1 </td> <td> NM_004197 </td> <td> serine/threonine kinase 19 </td> <td> STK19 </td> <td> 8859 </td> <td> NM_004197 /// NM_032454 /// NR_026717 </td> <td> 0006468 // protein phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -13.13 </td> <td> 64.36 </td> <td> -0.83 </td> <td> 0.43 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 208077_at </td> <td> 208077_at </td> <td> NM_014126 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014126.1 /DEF=Homo sapiens PRO0365 protein (PRO0365), mRNA. /FEA=mRNA /GEN=PRO0365 /PROD=PRO0365 protein /DB_XREF=gi:7662547 /UG=Hs.249613 PRO0365 protein /FL=gb:AF090921.1 gb:NM_014126.1 </td> <td> NM_014126 </td> <td> chromosome 9 open reading frame 38 </td> <td> C9orf38 </td> <td> 29044 </td> <td> NM_014126 /// XR_108926 /// XR_113207 /// XR_171764 </td> <td>  </td> <td>  </td> <td>  </td> <td> -10.87 </td> <td> 33.51 </td> <td> -0.83 </td> <td> 0.43 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209662_at </td> <td> 209662_at </td> <td> BC005383 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005383.1 /DEF=Homo sapiens, centrin, EF-hand protein, 3 (CDC31 yeast homolog), clone MGC:12502, mRNA, complete cds.  /FEA=mRNA /PROD=centrin, EF-hand protein, 3 (CDC31 yeasthomolog) /DB_XREF=gi:13529247 /UG=Hs.29463 centrin, EF-hand protein, 3 (CDC31 yeast homolog) /FL=gb:BC005383.1 gb:NM_004365.1 </td> <td> BC005383 </td> <td> centrin, EF-hand protein, 3 </td> <td> CETN3 </td> <td> 1070 </td> <td> NM_004365 /// XM_006714521 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007098 // centrosome cycle // traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0032391 // photoreceptor connecting cilium // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 14.60 </td> <td> 129.22 </td> <td> 0.83 </td> <td> 0.43 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209654_at </td> <td> 209654_at </td> <td> BC004902 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004902.1 /DEF=Homo sapiens, clone MGC:4271, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:4271) /DB_XREF=gi:13436178 /UG=Hs.5070 KIAA0947 protein /FL=gb:BC004902.1 </td> <td> BC004902 </td> <td> interactor of little elongator complex ELL subunit 1 </td> <td> ICE1 </td> <td> 23379 </td> <td> NM_015325 </td> <td> 0006869 // lipid transport // inferred from electronic annotation </td> <td>  </td> <td> 0005319 // lipid transporter activity // inferred from electronic annotation </td> <td> -12.73 </td> <td> 149.89 </td> <td> -0.83 </td> <td> 0.43 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202346_at </td> <td> 202346_at </td> <td> NM_005339 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005339.2 /DEF=Homo sapiens huntingtin interacting protein 2 (HIP2), mRNA. /FEA=mRNA /GEN=HIP2 /PROD=huntingtin interacting protein 2 /DB_XREF=gi:12545382 /UG=Hs.155485 huntingtin interacting protein 2 /FL=gb:NM_005339.2 gb:U58522.1 gb:AB022435.1 </td> <td> NM_005339 </td> <td> ubiquitin-conjugating enzyme E2K </td> <td> UBE2K </td> <td> 3093 </td> <td> NM_001111112 /// NM_001111113 /// NM_005339 </td> <td> 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from direct assay </td> <td> 12.07 </td> <td> 176.11 </td> <td> 0.83 </td> <td> 0.43 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 208791_at </td> <td> 208791_at </td> <td> M25915 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M25915.1 /DEF=Human complement cytolysis inhibitor (CLI) mRNA, complete cds. /FEA=mRNA /DB_XREF=gi:180619 /UG=Hs.75106 clusterin (complement lysis inhibitor, SP-40,40, sulfated glycoprotein 2, testosterone-repressed prostate message 2, apolipoprotein J) /FL=gb:J02908.1 gb:M25915.1 gb:M64722.1 gb:NM_001831.1 </td> <td> M25915 </td> <td> clusterin </td> <td> CLU </td> <td> 1191 </td> <td> NM_001831 /// NR_038335 /// NR_045494 /// XM_006716284 </td> <td> 0000902 // cell morphogenesis // inferred from direct assay /// 0001774 // microglial cell activation // inferred from direct assay /// 0001836 // release of cytochrome c from mitochondria // inferred by curator /// 0002376 // immune system process // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0017038 // protein import // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0032286 // central nervous system myelin maintenance // inferred from mutant phenotype /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0032463 // negative regulation of protein homooligomerization // inferred from mutant phenotype /// 0032760 // positive regulation of tumor necrosis factor production // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043691 // reverse cholesterol transport // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0050821 // protein stabilization // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051131 // chaperone-mediated protein complex assembly // inferred from direct assay /// 0051788 // response to misfolded protein // inferred from direct assay /// 0061077 // chaperone-mediated protein folding // inferred from direct assay /// 0061518 // microglial cell proliferation // inferred from direct assay /// 0097193 // intrinsic apoptotic signaling pathway // inferred from direct assay /// 1900221 // regulation of beta-amyloid clearance // inferred from direct assay /// 1901214 // regulation of neuron death // inferred from direct assay /// 1901214 // regulation of neuron death // inferred from mutant phenotype /// 1901216 // positive regulation of neuron death // inferred from direct assay /// 1901216 // positive regulation of neuron death // inferred from mutant phenotype /// 1902004 // positive regulation of beta-amyloid formation // inferred from sequence or structural similarity /// 1902230 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage // inferred from mutant phenotype /// 1902430 // negative regulation of beta-amyloid formation // inferred from direct assay /// 1902847 // regulation of neuronal signal transduction // inferred from mutant phenotype /// 1902949 // positive regulation of tau-protein kinase activity // inferred from mutant phenotype /// 1902998 // positive regulation of neurofibrillary tangle assembly // inferred from mutant phenotype /// 2000060 // positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0034366 // spherical high-density lipoprotein particle // inferred from direct assay /// 0042583 // chromaffin granule // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay /// 0097418 // neurofibrillary tangle // inferred from direct assay /// 0097440 // apical dendrite // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016887 // ATPase activity // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0051787 // misfolded protein binding // inferred from direct assay /// 0051787 // misfolded protein binding // inferred from physical interaction </td> <td> -19.48 </td> <td> 397.24 </td> <td> -0.83 </td> <td> 0.43 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 213193_x_at </td> <td> 213193_x_at </td> <td> AL559122 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL559122 /FEA=EST /DB_XREF=gi:12904310 /DB_XREF=est:AL559122 /CLONE=CS0DJ014YE01 (5 prime) /UG=Hs.303157 T cell receptor beta locus </td> <td> AL559122 </td> <td> T cell receptor beta constant 1 </td> <td> TRBC1 </td> <td> 28639 </td> <td>  </td> <td> 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0002230 // positive regulation of defense response to virus by host // inferred from sequence or structural similarity /// 0002230 // positive regulation of defense response to virus by host // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from direct assay /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // non-traceable author statement /// 0002827 // positive regulation of T-helper 1 type immune response // traceable author statement /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0010535 // positive regulation of activation of JAK2 kinase activity // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0032693 // negative regulation of interleukin-10 production // inferred from mutant phenotype /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // traceable author statement /// 0032733 // positive regulation of interleukin-10 production // inferred from direct assay /// 0032733 // positive regulation of interleukin-10 production // traceable author statement /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0032740 // positive regulation of interleukin-17 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0032816 // positive regulation of natural killer cell activation // inferred by curator /// 0032819 // positive regulation of natural killer cell proliferation // inferred from direct assay /// 0034105 // positive regulation of tissue remodeling // inferred by curator /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042104 // positive regulation of activated T cell proliferation // inferred from direct assay /// 0042346 // positive regulation of NF-kappaB import into nucleus // traceable author statement /// 0042510 // regulation of tyrosine phosphorylation of Stat1 protein // inferred from direct assay /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042520 // positive regulation of tyrosine phosphorylation of Stat4 protein // inferred from direct assay /// 0042523 // positive regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0043382 // positive regulation of memory T cell differentiation // inferred from sequence or structural similarity /// 0043382 // positive regulation of memory T cell differentiation // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048771 // tissue remodeling // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0050776 // regulation of immune response // traceable author statement /// 0050829 // defense response to Gram-negative bacterium // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051135 // positive regulation of NK T cell activation // inferred by curator /// 0051135 // positive regulation of NK T cell activation // inferred from direct assay /// 0051142 // positive regulation of NK T cell proliferation // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from electronic annotation /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from sequence or structural similarity /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from electronic annotation /// 2000330 // positive regulation of T-helper 17 cell lineage commitment // inferred from sequence or structural similarity /// 2000330 // positive regulation of T-helper 17 cell lineage commitment // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070743 // interleukin-23 complex // inferred from direct assay </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0045519 // interleukin-23 receptor binding // inferred from direct assay /// 0045519 // interleukin-23 receptor binding // inferred from electronic annotation </td> <td> 17.47 </td> <td> 157.61 </td> <td> 0.83 </td> <td> 0.43 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201163_s_at </td> <td> 201163_s_at </td> <td> NM_001553 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001553.1 /DEF=Homo sapiens insulin-like growth factor binding protein 7 (IGFBP7), mRNA.  /FEA=mRNA /GEN=IGFBP7 /PROD=insulin-like growth factor binding protein 7 /DB_XREF=gi:4504618 /UG=Hs.119206 insulin-like growth factor binding protein 7 /FL=gb:L19182.1 gb:NM_001553.1 </td> <td> NM_001553 </td> <td> insulin-like growth factor binding protein 7 </td> <td> IGFBP7 </td> <td> 3490 </td> <td> NM_001253835 /// NM_001553 </td> <td> 0001558 // regulation of cell growth // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from direct assay /// 0007566 // embryo implantation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050810 // regulation of steroid biosynthetic process // inferred from electronic annotation /// 0051414 // response to cortisol // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation </td> <td> 90.17 </td> <td> 962.86 </td> <td> 0.83 </td> <td> 0.43 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 211983_x_at </td> <td> 211983_x_at </td> <td> BE741683 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE741683 /FEA=EST /DB_XREF=gi:10155675 /DB_XREF=est:601594740F1 /CLONE=IMAGE:3948897 /UG=Hs.14376 actin, gamma 1 </td> <td> BE741683 </td> <td> actin, beta /// actin, gamma 1 </td> <td> ACTB /// ACTG1 </td> <td> 60 /// 71 </td> <td> NM_001101 /// NM_001199954 /// NM_001614 /// NR_037688 /// XM_006715764 /// XM_006722048 /// XM_006722049 </td> <td> 0001895 // retina homeostasis // inferred from expression pattern /// 0006325 // chromatin organization // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred by curator /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction </td> <td> -369.25 </td> <td> 5214.05 </td> <td> -0.83 </td> <td> 0.43 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 213404_s_at </td> <td> 213404_s_at </td> <td> BF033683 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF033683 /FEA=EST /DB_XREF=gi:10741395 /DB_XREF=est:601453992F1 /CLONE=IMAGE:3857711 /UG=Hs.279903 Ras homolog enriched in brain 2 </td> <td> BF033683 </td> <td> Ras homolog enriched in brain </td> <td> RHEB </td> <td> 6009 </td> <td> NM_005614 /// XM_006716081 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0032008 // positive regulation of TOR signaling // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from sequence or structural similarity /// 0019003 // GDP binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 32.12 </td> <td> 407.49 </td> <td> 0.82 </td> <td> 0.44 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 216306_x_at </td> <td> 216306_x_at </td> <td> X62006 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X62006.1 /DEF=H.sapiens PTB-1 gene for polypirimidine tract binding protein. /FEA=mRNA /GEN=PTB-1 /PROD=polypirimidine tract  binding protein /DB_XREF=gi:35767 /UG=Hs.172550 polypyrimidine tract binding protein (heterogeneous nuclear ribonucleoprotein I) </td> <td> X62006 </td> <td> microRNA 4745 /// polypyrimidine tract binding protein 1 </td> <td> MIR4745 /// PTBP1 </td> <td> 5725 /// 100616459 </td> <td> NM_002819 /// NM_031990 /// NM_031991 /// NM_175847 /// NR_039900 /// XM_005259597 /// XM_005259598 /// XR_244034 /// XR_244035 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0051148 // negative regulation of muscle cell differentiation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008187 // poly-pyrimidine tract binding // traceable author statement /// 0036002 // pre-mRNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 55.85 </td> <td> 886.27 </td> <td> 0.82 </td> <td> 0.44 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 216449_x_at </td> <td> 216449_x_at </td> <td> AK025862 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK025862.1 /DEF=Homo sapiens cDNA: FLJ22209 fis, clone HRC01496. /FEA=mRNA /DB_XREF=gi:10438505 /UG=Hs.288528 Homo sapiens cDNA: FLJ22209 fis, clone HRC01496 </td> <td> AK025862 </td> <td> heat shock protein 90kDa beta (Grp94), member 1 </td> <td> HSP90B1 </td> <td> 7184 </td> <td> NM_003299 </td> <td> 0001666 // response to hypoxia // inferred from direct assay /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // non-traceable author statement /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031247 // actin rod assembly // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051208 // sequestering of calcium ion // non-traceable author statement /// 0071318 // cellular response to ATP // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from direct assay /// 0046790 // virion binding // inferred from physical interaction /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -44.43 </td> <td> 636.04 </td> <td> -0.82 </td> <td> 0.44 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201090_x_at </td> <td> 201090_x_at </td> <td> NM_006082 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006082.1 /DEF=Homo sapiens tubulin, alpha, ubiquitous (K-ALPHA-1), mRNA. /FEA=mRNA /GEN=K-ALPHA-1 /PROD=tubulin, alpha, ubiquitous /DB_XREF=gi:5174476 /UG=Hs.278242 tubulin, alpha, ubiquitous /FL=gb:BC000696.1 gb:BC001128.1 gb:BC001209.1 gb:K00558.1 gb:AF081484.1 gb:NM_006082.1 </td> <td> NM_006082 </td> <td> tubulin, alpha 1b </td> <td> TUBA1B </td> <td> 10376 </td> <td> NM_006082 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // traceable author statement /// 0030705 // cytoskeleton-dependent intracellular transport // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051301 // cell division // traceable author statement /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 286.03 </td> <td> 3789.14 </td> <td> 0.82 </td> <td> 0.44 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218097_s_at </td> <td> 218097_s_at </td> <td> NM_024040 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024040.1 /DEF=Homo sapiens hypothetical protein MGC2491 (MGC2491), mRNA. /FEA=mRNA /GEN=MGC2491 /PROD=hypothetical protein MGC2491 /DB_XREF=gi:13128995 /UG=Hs.11270 hypothetical protein MGC2491 /FL=gb:BC000262.1 gb:NM_024040.1 </td> <td> NM_024040 </td> <td> CUE domain containing 2 </td> <td> CUEDC2 </td> <td> 79004 </td> <td> NM_024040 /// XM_005270147 /// XR_428716 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -26.67 </td> <td> 335.59 </td> <td> -0.82 </td> <td> 0.44 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200858_s_at </td> <td> 200858_s_at </td> <td> NM_001012 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001012.1 /DEF=Homo sapiens ribosomal protein S8 (RPS8), mRNA. /FEA=mRNA /GEN=RPS8 /PROD=ribosomal protein S8 /DB_XREF=gi:4506742 /UG=Hs.151604 ribosomal protein S8 /FL=gb:NM_001012.1 </td> <td> NM_001012 </td> <td> ribosomal protein S8 /// small nucleolar RNA, C/D box 38B /// small nucleolar RNA, C/D box 55 </td> <td> RPS8 /// SNORD38B /// SNORD55 </td> <td> 6202 /// 26811 /// 94163 </td> <td> NM_001012 /// NR_000015 /// NR_001457 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000462 // maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // not recorded /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // not recorded /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -80.82 </td> <td> 1604.56 </td> <td> -0.82 </td> <td> 0.44 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 212043_at </td> <td> 212043_at </td> <td> W72053 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W72053 /FEA=EST /DB_XREF=gi:1382323 /DB_XREF=est:zd66e04.s1 /CLONE=IMAGE:345630 /UG=Hs.110771 Homo sapiens cDNA: FLJ21904 fis, clone HEP03585 </td> <td> W72053 </td> <td> trans-golgi network protein 2 </td> <td> TGOLN2 </td> <td> 10618 </td> <td> NM_001206840 /// NM_001206841 /// NM_001206844 /// NM_006464 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030133 // transport vesicle // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 32.62 </td> <td> 505.94 </td> <td> 0.82 </td> <td> 0.44 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201139_s_at </td> <td> 201139_s_at </td> <td> NM_003142 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003142.1 /DEF=Homo sapiens Sjogren syndrome antigen B (autoantigen La) (SSB), mRNA.  /FEA=mRNA /GEN=SSB /PROD=autoantigen La /DB_XREF=gi:10835066 /UG=Hs.83715 Sjogren syndrome antigen B (autoantigen La) /FL=gb:NM_003142.1 gb:BC001289.1 gb:J04205.1 </td> <td> NM_003142 </td> <td> Sjogren syndrome antigen B (autoantigen La) </td> <td> SSB </td> <td> 6741 </td> <td> NM_001294145 /// NM_003142 /// XM_005246811 </td> <td> 0006396 // RNA processing // inferred from electronic annotation /// 0006400 // tRNA modification // traceable author statement /// 0008334 // histone mRNA metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000049 // tRNA binding // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -21.30 </td> <td> 181.47 </td> <td> -0.81 </td> <td> 0.44 </td> <td> 0.52 </td> <td> -4.60 </td> </tr>
  <tr> <td> 217758_s_at </td> <td> 217758_s_at </td> <td> NM_020123 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020123.1 /DEF=Homo sapiens endomembrane protein emp70 precursor isolog (LOC56889), mRNA.  /FEA=mRNA /GEN=LOC56889 /PROD=endomembrane protein emp70 precursor isolog /DB_XREF=gi:10047129 /UG=Hs.8203 endomembrane protein emp70 precursor isolog /FL=gb:NM_020123.1 gb:AF160213.1 gb:AF269150.1 </td> <td> NM_020123 </td> <td> transmembrane 9 superfamily member 3 </td> <td> TM9SF3 </td> <td> 56889 </td> <td> NM_020123 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 33.30 </td> <td> 473.07 </td> <td> 0.81 </td> <td> 0.44 </td> <td> 0.53 </td> <td> -4.60 </td> </tr>
  <tr> <td> 212031_at </td> <td> 212031_at </td> <td> AV757384 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV757384 /FEA=EST /DB_XREF=gi:10915232 /DB_XREF=est:AV757384 /CLONE=BMFAXE02 /UG=Hs.180789 S164 protein </td> <td> AV757384 </td> <td> RNA binding motif protein 25 </td> <td> RBM25 </td> <td> 58517 </td> <td> NM_021239 </td> <td> 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0097194 // execution phase of apoptosis // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -12.93 </td> <td> 276.31 </td> <td> -0.81 </td> <td> 0.44 </td> <td> 0.53 </td> <td> -4.60 </td> </tr>
  <tr> <td> 217820_s_at </td> <td> 217820_s_at </td> <td> NM_018212 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018212.1 /DEF=Homo sapiens hypothetical protein FLJ10773 (FLJ10773), mRNA. /FEA=mRNA /GEN=FLJ10773 /PROD=hypothetical protein FLJ10773 /DB_XREF=gi:8922657 /UG=Hs.14838 hypothetical protein FLJ10773 /FL=gb:NM_018212.1 </td> <td> NM_018212 </td> <td> enabled homolog (Drosophila) </td> <td> ENAH </td> <td> 55740 </td> <td> NM_001008493 /// NM_018212 /// XM_005273182 /// XM_005273187 /// XM_005273188 /// XM_005273189 /// XM_006711786 /// XM_006711787 /// XM_006711788 /// XM_006711789 /// XM_006711790 /// XM_006711791 /// XM_006711792 /// XM_006711793 /// XM_006711794 /// XM_006711795 /// XM_006711796 /// XM_006711797 </td> <td> 0001843 // neural tube closure // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008154 // actin polymerization or depolymerization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0046907 // intracellular transport // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement </td> <td> 0001725 // stress fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0050699 // WW domain binding // inferred from physical interaction </td> <td> 33.70 </td> <td> 239.00 </td> <td> 0.81 </td> <td> 0.44 </td> <td> 0.53 </td> <td> -4.60 </td> </tr>
  <tr> <td> 221779_at </td> <td> 221779_at </td> <td> BC001090 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BC001090.1 /DEF=Homo sapiens, clone IMAGE:3504989, mRNA, partial cds. /FEA=mRNA /PROD=Unknown (protein for IMAGE:3504989) /DB_XREF=gi:12654518 /UG=Hs.8535 hypothetical protein bA395L14.2 </td> <td> BC001090 </td> <td> MICAL-like 1 </td> <td> MICALL1 </td> <td> 85377 </td> <td> NM_033386 /// XM_005261791 /// XM_005261792 /// XM_006724345 </td> <td> 0006612 // protein targeting to membrane // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006898 // receptor-mediated endocytosis // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0032456 // endocytic recycling // inferred from electronic annotation /// 0032458 // slow endocytic recycling // inferred from mutant phenotype /// 0036010 // protein localization to endosome // inferred from mutant phenotype /// 0097320 // membrane tubulation // inferred from direct assay /// 1990126 // retrograde transport, endosome to plasma membrane // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from direct assay /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070300 // phosphatidic acid binding // inferred from direct assay </td> <td> 18.62 </td> <td> 120.46 </td> <td> 0.81 </td> <td> 0.44 </td> <td> 0.53 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200602_at </td> <td> 200602_at </td> <td> NM_000484 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000484.1 /DEF=Homo sapiens amyloid beta (A4) precursor protein (protease nexin-II, Alzheimer disease) (APP), mRNA.  /FEA=mRNA /GEN=APP /PROD=amyloid beta (A4) precursor protein (proteasenexin-II, Alzheimer disease) /DB_XREF=gi:4502166 /UG=Hs.177486 amyloid beta (A4) precursor protein (protease nexin-II, Alzheimer disease) /FL=gb:NM_000484.1 </td> <td> NM_000484 </td> <td> amyloid beta (A4) precursor protein </td> <td> APP </td> <td> 351 </td> <td> NM_000484 /// NM_001136016 /// NM_001136129 /// NM_001136130 /// NM_001136131 /// NM_001204301 /// NM_001204302 /// NM_001204303 /// NM_201413 /// NM_201414 </td> <td> 0000085 // mitotic G2 phase // inferred from sequence or structural similarity /// 0001967 // suckling behavior // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006378 // mRNA polyadenylation // inferred from sequence or structural similarity /// 0006417 // regulation of translation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006508 // proteolysis // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0007617 // mating behavior // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0008088 // axon cargo transport // inferred from sequence or structural similarity /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0010971 // positive regulation of G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0016199 // axon midline choice point recognition // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0016358 // dendrite development // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // traceable author statement /// 0030900 // forebrain development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from sequence or structural similarity /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040014 // regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048669 // collateral sprouting in absence of injury // inferred from sequence or structural similarity /// 0050803 // regulation of synapse structure and activity // inferred from sequence or structural similarity /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051124 // synaptic growth at neuromuscular junction // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from mutant phenotype /// 0051563 // smooth endoplasmic reticulum calcium ion homeostasis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005641 // nuclear envelope lumen // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from sequence or structural similarity /// 0030424 // axon // inferred from sequence or structural similarity /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from direct assay /// 0043198 // dendritic shaft // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0051233 // spindle midzone // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from sequence or structural similarity /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0033130 // acetylcholine receptor binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation /// 0051425 // PTB domain binding // inferred from physical interaction /// 0070851 // growth factor receptor binding // inferred from electronic annotation </td> <td> 65.73 </td> <td> 539.81 </td> <td> 0.81 </td> <td> 0.45 </td> <td> 0.53 </td> <td> -4.60 </td> </tr>
  <tr> <td> 208736_at </td> <td> 208736_at </td> <td> AF004561 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF004561.1 /DEF=Homo sapiens p21-Arc mRNA, complete cds. /FEA=mRNA /PROD=p21-Arc /DB_XREF=gi:2209346 /UG=Hs.6895 actin related protein 23 complex, subunit 3 (21 kD) /FL=gb:AF004561.1 gb:AF006086.1 gb:NM_005719.1 </td> <td> AF004561 </td> <td> actin related protein 2/3 complex, subunit 3, 21kDa </td> <td> ARPC3 </td> <td> 10094 </td> <td> NM_001278556 /// NM_001287222 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 34.65 </td> <td> 618.80 </td> <td> 0.81 </td> <td> 0.45 </td> <td> 0.53 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218059_at </td> <td> 218059_at </td> <td> NM_016096 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016096.1 /DEF=Homo sapiens HSPC038 protein (LOC51123), mRNA. /FEA=mRNA /GEN=LOC51123 /PROD=HSPC038 protein /DB_XREF=gi:7705816 /UG=Hs.23528 HSPC038 protein /FL=gb:AF275802.1 gb:AF275809.1 gb:AF125099.1 gb:NM_016096.1 </td> <td> NM_016096 </td> <td> zinc finger protein 706 </td> <td> ZNF706 </td> <td> 51123 </td> <td> NM_001042510 /// NM_001267708 /// NM_001267709 /// NM_016096 </td> <td>  </td> <td>  </td> <td> 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -49.08 </td> <td> 485.81 </td> <td> -0.80 </td> <td> 0.45 </td> <td> 0.53 </td> <td> -4.60 </td> </tr>
  <tr> <td> 210213_s_at </td> <td> 210213_s_at </td> <td> AF022229 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF022229.1 /DEF=Homo sapiens translation initiation factor 6 (eIF6) mRNA, complete cds.  /FEA=mRNA /GEN=eIF6 /PROD=translation initiation factor 6 /DB_XREF=gi:2809382 /UG=Hs.5215 integrin beta 4 binding protein /FL=gb:AF022229.1 </td> <td> AF022229 </td> <td> eukaryotic translation initiation factor 6 </td> <td> EIF6 </td> <td> 3692 </td> <td> NM_001267810 /// NM_002212 /// NM_181466 /// NM_181467 /// NM_181468 /// NM_181469 /// NR_052022 /// NR_052023 /// NR_052024 </td> <td> 0000054 // ribosomal subunit export from nucleus // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042256 // mature ribosome assembly // inferred from mutant phenotype /// 0042273 // ribosomal large subunit biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005638 // lamin filament // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from direct assay /// 0043023 // ribosomal large subunit binding // inferred from electronic annotation </td> <td> 19.60 </td> <td> 375.60 </td> <td> 0.80 </td> <td> 0.45 </td> <td> 0.53 </td> <td> -4.60 </td> </tr>
  <tr> <td> 208788_at </td> <td> 208788_at </td> <td> AL136939 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL136939.1 /DEF=Homo sapiens mRNA; cDNA DKFZp586B1824 (from clone DKFZp586B1824); complete cds.  /FEA=mRNA /GEN=DKFZp586B1824 /PROD=hypothetical protein /DB_XREF=gi:12053372 /UG=Hs.250175 homolog of yeast long chain polyunsaturated fatty acid elongation enzyme 2 /FL=gb:NM_021814.1 gb:AL136939.1 gb:AF111849.1 gb:AF231981.1 </td> <td> AL136939 </td> <td> ELOVL fatty acid elongase 5 </td> <td> ELOVL5 </td> <td> 60481 </td> <td> NM_001242828 /// NM_001242830 /// NM_001242831 /// NM_021814 /// XM_005249266 /// XM_005249267 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006636 // unsaturated fatty acid biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0033559 // unsaturated fatty acid metabolic process // traceable author statement /// 0034625 // fatty acid elongation, monounsaturated fatty acid // inferred from direct assay /// 0034626 // fatty acid elongation, polyunsaturated fatty acid // inferred from direct assay /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0036109 // alpha-linolenic acid metabolic process // traceable author statement /// 0042761 // very long-chain fatty acid biosynthetic process // inferred from direct assay /// 0043651 // linoleic acid metabolic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0009922 // fatty acid elongase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -22.60 </td> <td> 687.00 </td> <td> -0.80 </td> <td> 0.45 </td> <td> 0.53 </td> <td> -4.60 </td> </tr>
  <tr> <td> 208731_at </td> <td> 208731_at </td> <td> AU158062 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU158062 /FEA=EST /DB_XREF=gi:11019583 /DB_XREF=est:AU158062 /CLONE=PLACE1010787 /UG=Hs.78305 RAB2, member RAS oncogene family /FL=gb:NM_002865.1 gb:M28213.1 </td> <td> AU158062 </td> <td> RAB2A, member RAS oncogene family </td> <td> RAB2A </td> <td> 5862 </td> <td> NM_001242644 /// NM_002865 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0019003 // GDP binding // inferred from direct assay </td> <td> 35.47 </td> <td> 604.16 </td> <td> 0.80 </td> <td> 0.45 </td> <td> 0.53 </td> <td> -4.60 </td> </tr>
  <tr> <td> 216843_x_at </td> <td> 216843_x_at </td> <td> U38964 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U38964 /DEF=Human PMS2 related (hPMSR2) gene, complete cds /FEA=CDS /DB_XREF=gi:1055353 /UG=Hs.323954 postmeiotic segregation increased 2-like 8 </td> <td> U38964 </td> <td> postmeiotic segregation increased 2 pseudogene 1 </td> <td> PMS2P1 </td> <td> 5379 </td> <td> NM_005394 /// NR_003613 </td> <td> 0006298 // mismatch repair // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0032300 // mismatch repair complex // inferred from electronic annotation </td> <td> 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 13.60 </td> <td> 142.88 </td> <td> 0.80 </td> <td> 0.45 </td> <td> 0.53 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200935_at </td> <td> 200935_at </td> <td> NM_004343 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004343.2 /DEF=Homo sapiens calreticulin (CALR), mRNA. /FEA=mRNA /GEN=CALR /PROD=calreticulin precursor /DB_XREF=gi:5921996 /UG=Hs.16488 calreticulin /FL=gb:BC002500.1 gb:M84739.1 gb:M32294.1 gb:NM_004343.2 </td> <td> NM_004343 </td> <td> calreticulin </td> <td> CALR </td> <td> 811 </td> <td> NM_004343 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002502 // peptide antigen assembly with MHC class I protein complex // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006611 // protein export from nucleus // inferred from direct assay /// 0006874 // cellular calcium ion homeostasis // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007050 // cell cycle arrest // inferred from genetic interaction /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0017148 // negative regulation of translation // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0022417 // protein maturation by protein folding // traceable author statement /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032355 // response to estradiol // inferred from electronic annotation /// 0033144 // negative regulation of intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0033574 // response to testosterone // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0040020 // regulation of meiosis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042921 // glucocorticoid receptor signaling pathway // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045665 // negative regulation of neuron differentiation // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from genetic interaction /// 0045787 // positive regulation of cell cycle // inferred from genetic interaction /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from direct assay /// 0050766 // positive regulation of phagocytosis // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050821 // protein stabilization // traceable author statement /// 0051208 // sequestering of calcium ion // traceable author statement /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // inferred from electronic annotation /// 0071285 // cellular response to lithium ion // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0090398 // cellular senescence // inferred from genetic interaction /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from mutant phenotype /// 2000510 // positive regulation of dendritic cell chemotaxis // inferred from mutant phenotype </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005844 // polysome // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0033018 // sarcoplasmic reticulum lumen // inferred from electronic annotation /// 0042824 // MHC class I peptide loading complex // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0001849 // complement component C1q binding // traceable author statement /// 0001948 // glycoprotein binding // inferred from physical interaction /// 0003677 // DNA binding // non-traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0030246 // carbohydrate binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042277 // peptide binding // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation /// 0044183 // protein binding involved in protein folding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from direct assay /// 0051082 // unfolded protein binding // traceable author statement /// 0051087 // chaperone binding // traceable author statement </td> <td> 57.05 </td> <td> 306.73 </td> <td> 0.80 </td> <td> 0.45 </td> <td> 0.53 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201291_s_at </td> <td> 201291_s_at </td> <td> AU159942 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU159942 /FEA=EST /DB_XREF=gi:11021463 /DB_XREF=est:AU159942 /CLONE=Y79AA1000724 /UG=Hs.156346 topoisomerase (DNA) II alpha (170kD) /FL=gb:J04088.1 gb:NM_001067.1 </td> <td> AU159942 </td> <td> topoisomerase (DNA) II alpha 170kDa </td> <td> TOP2A </td> <td> 7153 </td> <td> NM_001067 /// XM_005257632 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0000712 // resolution of meiotic recombination intermediates // not recorded /// 0000819 // sister chromatid segregation // not recorded /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006260 // DNA replication // non-traceable author statement /// 0006261 // DNA-dependent DNA replication //  /// 0006265 // DNA topological change // inferred from direct assay /// 0006266 // DNA ligation // inferred from direct assay /// 0006268 // DNA unwinding involved in DNA replication // not recorded /// 0006281 // DNA repair // non-traceable author statement /// 0006312 // mitotic recombination // not recorded /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0030261 // chromosome condensation // inferred from electronic annotation /// 0030263 // apoptotic chromosome condensation // inferred from direct assay /// 0040016 // embryonic cleavage // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0044774 // mitotic DNA integrity checkpoint // not recorded /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype /// 0045870 // positive regulation of single stranded viral RNA replication via double stranded DNA intermediate // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement </td> <td> 0000228 // nuclear chromosome // inferred from direct assay /// 0000793 // condensed chromosome // inferred from electronic annotation /// 0000795 // synaptonemal complex //  /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005814 // centriole // inferred from direct assay /// 0009295 // nucleoid // not recorded /// 0009330 // DNA topoisomerase complex (ATP-hydrolyzing) // inferred from direct assay /// 0019035 // viral integration complex // non-traceable author statement /// 0043234 // protein complex // inferred from physical interaction </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from direct assay /// 0003916 // DNA topoisomerase activity // inferred from electronic annotation /// 0003918 // DNA topoisomerase type II (ATP-hydrolyzing) activity // inferred from direct assay /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008144 // drug binding // inferred from direct assay /// 0008301 // DNA binding, bending // inferred from direct assay /// 0016853 // isomerase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from mutant phenotype /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> 15.40 </td> <td> 113.60 </td> <td> 0.80 </td> <td> 0.45 </td> <td> 0.53 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218209_s_at </td> <td> 218209_s_at </td> <td> NM_018170 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018170.1 /DEF=Homo sapiens hypothetical protein FLJ10656 (FLJ10656), mRNA. /FEA=mRNA /GEN=FLJ10656 /PROD=hypothetical protein FLJ10656 /DB_XREF=gi:8922574 /UG=Hs.300906 hypothetical protein FLJ10656 /FL=gb:NM_018170.1 </td> <td> NM_018170 </td> <td> regulation of nuclear pre-mRNA domain containing 1A </td> <td> RPRD1A </td> <td> 55197 </td> <td> NM_018170 /// XM_005258293 /// XM_005258294 </td> <td> 0070940 // dephosphorylation of RNA polymerase II C-terminal domain // inferred from mutant phenotype </td> <td> 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay </td> <td>  </td> <td> -13.33 </td> <td> 121.31 </td> <td> -0.80 </td> <td> 0.45 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218117_at </td> <td> 218117_at </td> <td> NM_014248 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014248.1 /DEF=Homo sapiens ring-box 1 (RBX1), mRNA. /FEA=mRNA /GEN=RBX1 /PROD=ring-box 1 /DB_XREF=gi:7657507 /UG=Hs.279919 ring-box 1 /FL=gb:BC001466.1 gb:AF140598.1 gb:AF142059.1 gb:NM_014248.1 </td> <td> NM_014248 </td> <td> ring-box 1, E3 ubiquitin protein ligase </td> <td> RBX1 </td> <td> 9978 </td> <td> NM_014248 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0045116 // protein neddylation // inferred from direct assay /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0071456 // cellular response to hypoxia // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0019005 // SCF ubiquitin ligase complex // inferred from sequence or structural similarity /// 0030891 // VCB complex // inferred from electronic annotation /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from direct assay /// 0031462 // Cul2-RING ubiquitin ligase complex // inferred from direct assay /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay /// 0031464 // Cul4A-RING E3 ubiquitin ligase complex // inferred from direct assay /// 0031465 // Cul4B-RING E3 ubiquitin ligase complex // inferred from direct assay /// 0031466 // Cul5-RING ubiquitin ligase complex // inferred from direct assay /// 0031467 // Cul7-RING ubiquitin ligase complex // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019788 // NEDD8 ligase activity // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 34.95 </td> <td> 500.23 </td> <td> 0.79 </td> <td> 0.45 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200635_s_at </td> <td> 200635_s_at </td> <td> AU145351 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU145351 /FEA=EST /DB_XREF=gi:11006872 /DB_XREF=est:AU145351 /CLONE=HEMBA1004591 /UG=Hs.75216 protein tyrosine phosphatase, receptor type, F /FL=gb:NM_002840.1 </td> <td> AU145351 </td> <td> protein tyrosine phosphatase, receptor type, F </td> <td> PTPRF </td> <td> 5792 </td> <td> NM_002840 /// NM_130440 /// XM_005271079 /// XM_005271080 /// XM_005271081 /// XM_005271082 /// XM_006710795 /// XM_006710796 /// XM_006710797 /// XM_006710798 /// XM_006710799 /// XM_006710800 /// XM_006710801 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from mutant phenotype /// 1900121 // negative regulation of receptor binding // inferred from mutant phenotype </td> <td> 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from mutant phenotype /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> 29.38 </td> <td> 200.76 </td> <td> 0.79 </td> <td> 0.45 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201337_s_at </td> <td> 201337_s_at </td> <td> NM_004781 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004781.2 /DEF=Homo sapiens vesicle-associated membrane protein 3 (cellubrevin) (VAMP3), mRNA.  /FEA=mRNA /GEN=VAMP3 /PROD=vesicle-associated membrane protein 3 /DB_XREF=gi:9257252 /UG=Hs.66708 vesicle-associated membrane protein 3 (cellubrevin) /FL=gb:BC003570.1 gb:NM_004781.2 </td> <td> NM_004781 </td> <td> vesicle-associated membrane protein 3 </td> <td> VAMP3 </td> <td> 9341 </td> <td> NM_004781 </td> <td> 0001921 // positive regulation of receptor recycling // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // traceable author statement /// 0006904 // vesicle docking involved in exocytosis // traceable author statement /// 0006906 // vesicle fusion // not recorded /// 0007269 // neurotransmitter secretion // not recorded /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from sequence or structural similarity /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from sequence or structural similarity /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0043001 // Golgi to plasma membrane protein transport // inferred from electronic annotation /// 0061025 // membrane fusion // traceable author statement </td> <td> 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030141 // secretory granule // inferred from electronic annotation /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031201 // SNARE complex // not recorded /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay </td> <td> 0000149 // SNARE binding // not recorded /// 0005484 // SNAP receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0017075 // syntaxin-1 binding // inferred from electronic annotation </td> <td> 20.55 </td> <td> 230.35 </td> <td> 0.79 </td> <td> 0.45 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 213359_at </td> <td> 213359_at </td> <td> W74620 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W74620 /FEA=EST /DB_XREF=gi:1384833 /DB_XREF=est:zd77e04.s1 /CLONE=IMAGE:346686 /UG=Hs.303627 heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA-binding protein 1, 37kD) </td> <td> W74620 </td> <td> heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) </td> <td> HNRNPD </td> <td> 3184 </td> <td> NM_001003810 /// NM_002138 /// NM_031369 /// NM_031370 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006401 // RNA catabolic process // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0042752 // regulation of circadian rhythm // inferred from mutant phenotype /// 0043488 // regulation of mRNA stability // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0097167 // circadian regulation of translation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042162 // telomeric DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -25.20 </td> <td> 83.03 </td> <td> -0.79 </td> <td> 0.45 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 221860_at </td> <td> 221860_at </td> <td> AL044078 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL044078 /FEA=EST /DB_XREF=gi:5935937 /DB_XREF=est:DKFZp434L2128_s1 /CLONE=DKFZp434L2128 /UG=Hs.2730 heterogeneous nuclear ribonucleoprotein L </td> <td> AL044078 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -13.07 </td> <td> 53.39 </td> <td> -0.79 </td> <td> 0.45 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209709_s_at </td> <td> 209709_s_at </td> <td> U29343 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U29343.1 /DEF=Homo sapiens hyaluronan receptor (RHAMM) mRNA, complete cds. /FEA=mRNA /GEN=RHAMM /PROD=hyaluronan receptor /DB_XREF=gi:2959555 /UG=Hs.72550 hyaluronan-mediated motility receptor (RHAMM) /FL=gb:U29343.1 gb:AF032862.1 gb:NM_012484.1 </td> <td> U29343 </td> <td> hyaluronan-mediated motility receptor (RHAMM) </td> <td> HMMR </td> <td> 3161 </td> <td> NM_001142556 /// NM_001142557 /// NM_012484 /// NM_012485 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030212 // hyaluronan metabolic process // traceable author statement /// 0030214 // hyaluronan catabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0005540 // hyaluronic acid binding // inferred from electronic annotation </td> <td> -15.80 </td> <td> 146.22 </td> <td> -0.79 </td> <td> 0.45 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 214548_x_at </td> <td> 214548_x_at </td> <td> AF064092 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF064092.1 /DEF=Homo sapiens mutant guanine nucleotide-binding protein G(s), alpha subunit mRNA, complete cds.  /FEA=CDS /PROD=mutant guanine nucleotide-binding protein G(s),alpha subunit /DB_XREF=gi:3142636 /UG=Hs.273385 guanine nucleotide binding protein (G protein), alpha stimulating activity polypeptide 1 /FL=gb:AF064092.1 </td> <td> AF064092 </td> <td> GNAS complex locus </td> <td> GNAS </td> <td> 2778 </td> <td> NM_000516 /// NM_001077488 /// NM_001077489 /// NM_001077490 /// NM_016592 /// NM_080425 /// NM_080426 /// NR_003259 /// XM_005260401 /// XM_005260402 /// XM_006723781 /// XM_006723782 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // not recorded /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007565 // female pregnancy // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007606 // sensory perception of chemical stimulus // not recorded /// 0007608 // sensory perception of smell // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0009306 // protein secretion // non-traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040015 // negative regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040032 // post-embryonic body morphogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043950 // positive regulation of cAMP-mediated signaling // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0046907 // intracellular transport // non-traceable author statement /// 0048589 // developmental growth // inferred from direct assay /// 0048589 // developmental growth // inferred from mutant phenotype /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050890 // cognition // inferred from direct assay /// 0050890 // cognition // inferred from mutant phenotype /// 0051216 // cartilage development // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060348 // bone development // inferred from direct assay /// 0060348 // bone development // inferred from mutant phenotype /// 0060789 // hair follicle placode formation // inferred from direct assay /// 0060789 // hair follicle placode formation // inferred from mutant phenotype /// 0070527 // platelet aggregation // inferred from direct assay /// 0070527 // platelet aggregation // inferred from mutant phenotype /// 0071107 // response to parathyroid hormone // inferred from mutant phenotype /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071514 // genetic imprinting // inferred from electronic annotation /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity /// 0071880 // adenylate cyclase-activating adrenergic receptor signaling pathway // inferred from direct assay </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from sequence or structural similarity /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031224 // intrinsic component of membrane // inferred from direct assay /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // not recorded /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004016 // adenylate cyclase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from direct assay /// 0005159 // insulin-like growth factor receptor binding //  /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0031698 // beta-2 adrenergic receptor binding //  /// 0031748 // D1 dopamine receptor binding //  /// 0031852 // mu-type opioid receptor binding // not recorded /// 0035255 // ionotropic glutamate receptor binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051430 // corticotropin-releasing hormone receptor 1 binding // </td> <td> -177.80 </td> <td> 2317.40 </td> <td> -0.79 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202142_at </td> <td> 202142_at </td> <td> BC003090 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003090.1 /DEF=Homo sapiens, COP9 homolog, clone MGC:1297, mRNA, complete cds. /FEA=mRNA /PROD=COP9 homolog /DB_XREF=gi:13111846 /UG=Hs.75193 COP9 homolog /FL=gb:BC003090.1 gb:U51205.1 gb:NM_006710.1 </td> <td> BC003090 </td> <td> COP9 signalosome subunit 8 </td> <td> COPS8 </td> <td> 10920 </td> <td> NM_006710 /// NM_198189 </td> <td> 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0010388 // cullin deneddylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0008180 // COP9 signalosome // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 27.93 </td> <td> 391.76 </td> <td> 0.79 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201883_s_at </td> <td> 201883_s_at </td> <td> D29805 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D29805.1 /DEF=Human mRNA for beta-1,4-galactosyltransferase, complete cds. /FEA=mRNA /PROD=beta-1,4-galactosyltransferase /DB_XREF=gi:474986 /UG=Hs.198248 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 /FL=gb:NM_001497.1 gb:D29805.1 </td> <td> D29805 </td> <td> UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 </td> <td> B4GALT1 </td> <td> 2683 </td> <td> NM_001497 /// XM_005251440 </td> <td> 0002064 // epithelial cell development // inferred from electronic annotation /// 0002526 // acute inflammatory response // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005989 // lactose biosynthetic process // inferred from electronic annotation /// 0006012 // galactose metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007338 // single fertilization // traceable author statement /// 0007339 // binding of sperm to zona pellucida // traceable author statement /// 0007341 // penetration of zona pellucida // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009101 // glycoprotein biosynthetic process // inferred from electronic annotation /// 0009312 // oligosaccharide biosynthetic process // inferred from direct assay /// 0009312 // oligosaccharide biosynthetic process // non-traceable author statement /// 0018146 // keratan sulfate biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030879 // mammary gland development // inferred from electronic annotation /// 0032504 // multicellular organism reproduction // traceable author statement /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042339 // keratan sulfate metabolic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045136 // development of secondary sexual characteristics // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0050900 // leukocyte migration // inferred from electronic annotation /// 0051270 // regulation of cellular component movement // inferred from electronic annotation /// 0060046 // regulation of acrosome reaction // inferred from electronic annotation /// 0060054 // positive regulation of epithelial cell proliferation involved in wound healing // inferred from electronic annotation /// 0060055 // angiogenesis involved in wound healing // inferred from electronic annotation /// 0060058 // positive regulation of apoptotic process involved in mammary gland involution // inferred from electronic annotation </td> <td> 0000138 // Golgi trans cisterna // inferred from direct assay /// 0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0030057 // desmosome // inferred from direct assay /// 0030112 // glycocalyx // inferred from direct assay /// 0031526 // brush border membrane // inferred from direct assay /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003831 // beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity // inferred from direct assay /// 0003945 // N-acetyllactosamine synthase activity // inferred from direct assay /// 0004461 // lactose synthase activity // inferred from direct assay /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0008378 // galactosyltransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0035250 // UDP-galactosyltransferase activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043014 // alpha-tubulin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from physical interaction </td> <td> -14.32 </td> <td> 68.06 </td> <td> -0.79 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202603_at </td> <td> 202603_at </td> <td> N51370 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N51370 /FEA=EST /DB_XREF=gi:1192536 /DB_XREF=est:yz16d01.s1 /CLONE=IMAGE:283201 /UG=Hs.172028 a disintegrin and metalloproteinase domain 10 /FL=gb:AF009615.1 gb:NM_001110.1 </td> <td> N51370 </td> <td> ADAM metallopeptidase domain 10 </td> <td> ADAM10 </td> <td> 102 </td> <td> NM_001110 /// XM_005254117 </td> <td> 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006509 // membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0007162 // negative regulation of cell adhesion // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from sequence or structural similarity /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0007267 // cell-cell signaling // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0010820 // positive regulation of T cell chemotaxis // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030574 // collagen catabolic process // traceable author statement /// 0034612 // response to tumor necrosis factor // inferred from direct assay /// 0042117 // monocyte activation // inferred from mutant phenotype /// 0051088 // PMA-inducible membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0051089 // constitutive protein ectodomain proteolysis // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005798 // Golgi-associated vesicle // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097038 // perinuclear endoplasmic reticulum // inferred from direct assay /// 0097197 // tetraspanin-enriched microdomain // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from sequence or structural similarity /// 0004222 // metalloendopeptidase activity // inferred from mutant phenotype /// 0004222 // metalloendopeptidase activity // non-traceable author statement /// 0005102 // receptor binding // non-traceable author statement /// 0005178 // integrin binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from direct assay /// 0008237 // metallopeptidase activity // inferred from mutant phenotype /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -20.35 </td> <td> 526.00 </td> <td> -0.79 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 205370_x_at </td> <td> 205370_x_at </td> <td> NM_001918 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001918.1 /DEF=Homo sapiens dihydrolipoamide branched chain transacylase (E2 component of branched chain keto acid dehydrogenase complex; maple syrup urine disease) (DBT), mRNA.  /FEA=mRNA /GEN=DBT /PROD=dihydrolipoamide branched chain transacylase (E2component of branched chain keto acid dehydrogenasecomplex; maple syrup urine disease) /DB_XREF=gi:4503264 /UG=Hs.139410 dihydrolipoamide branched chain transacylase (E2 component of branched chain keto acid dehydrogenase complex; maple syrup urine disease) /FL=gb:J03208.1 gb:NM_001918.1 gb:M27093.1 </td> <td> NM_001918 </td> <td> dihydrolipoamide branched chain transacylase E2 </td> <td> DBT </td> <td> 1629 </td> <td> NM_001918 /// XM_005270545 /// XM_005270546 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0009083 // branched-chain amino acid catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046949 // fatty-acyl-CoA biosynthetic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005947 // mitochondrial alpha-ketoglutarate dehydrogenase complex // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay </td> <td> 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0043754 // dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation </td> <td> 61.88 </td> <td> 374.04 </td> <td> 0.79 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202253_s_at </td> <td> 202253_s_at </td> <td> NM_004945 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004945.1 /DEF=Homo sapiens dynamin 2 (DNM2), mRNA. /FEA=mRNA /GEN=DNM2 /PROD=dynamin 2 /DB_XREF=gi:4826699 /UG=Hs.167013 dynamin 2 /FL=gb:L36983.1 gb:NM_004945.1 </td> <td> NM_004945 </td> <td> dynamin 2 </td> <td> DNM2 </td> <td> 1785 </td> <td> NM_001005360 /// NM_001005361 /// NM_001005362 /// NM_001190716 /// NM_004945 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // non-traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006184 // GTP catabolic process // non-traceable author statement /// 0006184 // GTP catabolic process // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // non-traceable author statement /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0033572 // transferrin transport // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // non-traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0048489 // synaptic vesicle transport // non-traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from direct assay /// 0045334 // clathrin-coated endocytic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // non-traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008017 // microtubule binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // non-traceable author statement /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> 10.95 </td> <td> 74.28 </td> <td> 0.79 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 208714_at </td> <td> 208714_at </td> <td> AF092131 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF092131.1 /DEF=Homo sapiens 51kDa subunit of NADH dehydrogenase mRNA, complete cds.  /FEA=mRNA /PROD=51kDa subunit of NADH dehydrogenase /DB_XREF=gi:5138911 /UG=Hs.7744 NADH dehydrogenase (ubiquinone) flavoprotein 1 (51kD) /FL=gb:AF053070.1 gb:AF092131.1 gb:NM_007103.1 </td> <td> AF092131 </td> <td> NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa </td> <td> NDUFV1 </td> <td> 4723 </td> <td> NM_001166102 /// NM_007103 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // inferred by curator /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // non-traceable author statement /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // inferred from mutant phenotype /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0003954 // NADH dehydrogenase activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016651 // oxidoreductase activity, acting on NAD(P)H // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation </td> <td> -27.75 </td> <td> 313.40 </td> <td> -0.79 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202373_s_at </td> <td> 202373_s_at </td> <td> AF255648 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF255648.1 /DEF=Homo sapiens rGAP-iso mRNA, complete cds. /FEA=mRNA /PROD=rGAP-iso /DB_XREF=gi:12005820 /UG=Hs.197289 rab3 GTPase-activating protein, non-catalytic subunit (150kD) /FL=gb:AF255648.1 gb:AF004828.1 gb:NM_012414.1 </td> <td> AF255648 </td> <td> aurora kinase A pseudogene 1 /// RAB3 GTPase activating protein subunit 2 (non-catalytic) </td> <td> AURKAPS1 /// RAB3GAP2 </td> <td> 6791 /// 25782 </td> <td> NM_012414 /// NR_001587 </td> <td> 0006364 // rRNA processing // inferred from sequence or structural similarity /// 0006886 // intracellular protein transport // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0043087 // regulation of GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0030234 // enzyme regulator activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity </td> <td> 16.43 </td> <td> 196.54 </td> <td> 0.78 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200859_x_at </td> <td> 200859_x_at </td> <td> NM_001456 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001456.1 /DEF=Homo sapiens filamin A, alpha (actin-binding protein-280) (FLNA), mRNA.  /FEA=mRNA /GEN=FLNA /PROD=filamin 1 (actin-binding protein-280) /DB_XREF=gi:4503744 /UG=Hs.195464 filamin A, alpha (actin-binding protein-280) /FL=gb:NM_001456.1 </td> <td> NM_001456 </td> <td> filamin A, alpha </td> <td> FLNA </td> <td> 2316 </td> <td> NM_001110556 /// NM_001456 </td> <td> 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0007195 // adenylate cyclase-inhibiting dopamine receptor signaling pathway // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0034329 // cell junction assembly // traceable author statement /// 0034394 // protein localization to cell surface // inferred from direct assay /// 0042177 // negative regulation of protein catabolic process // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from mutant phenotype /// 0043113 // receptor clustering // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045022 // early endosome to late endosome transport // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from direct assay /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0051220 // cytoplasmic sequestering of protein // inferred from mutant phenotype /// 0051764 // actin crosslink formation // inferred from direct assay /// 0090307 // spindle assembly involved in mitosis // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred by curator /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031523 // Myb complex // inferred from direct assay /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097440 // apical dendrite // inferred from electronic annotation </td> <td> 0001948 // glycoprotein binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0017048 // Rho GTPase binding // inferred from direct assay /// 0017160 // Ral GTPase binding // inferred from direct assay /// 0031267 // small GTPase binding // inferred from direct assay /// 0031852 // mu-type opioid receptor binding // inferred from electronic annotation /// 0034988 // Fc-gamma receptor I complex binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0048365 // Rac GTPase binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from direct assay </td> <td> 80.65 </td> <td> 970.75 </td> <td> 0.78 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 202543_s_at </td> <td> 202543_s_at </td> <td> BC005359 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005359.1 /DEF=Homo sapiens, glia maturation factor, beta, clone MGC:12462, mRNA, complete cds.  /FEA=mRNA /PROD=glia maturation factor, beta /DB_XREF=gi:13529184 /UG=Hs.151413 glia maturation factor, beta /FL=gb:BC005359.1 gb:M86492.1 gb:AB001106.1 gb:NM_004124.1 </td> <td> BC005359 </td> <td> glia maturation factor, beta </td> <td> GMFB </td> <td> 2764 </td> <td> NM_004124 /// XM_005267541 /// XM_006720118 </td> <td> 0006468 // protein phosphorylation // traceable author statement /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0008047 // enzyme activator activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation </td> <td> 15.15 </td> <td> 109.90 </td> <td> 0.78 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 209369_at </td> <td> 209369_at </td> <td> M63310 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M63310.1 /DEF=Human 1,2-cyclic-inositol-phosphate phosphodiesterase (ANX3) mRNA, complete cds.  /FEA=mRNA /GEN=ANX3 /PROD=1,2-cyclic-inositol-phosphate phosphodiesterase /DB_XREF=gi:178696 /UG=Hs.1378 annexin A3 /FL=gb:BC000871.1 gb:M63310.1 gb:M20560.1 gb:NM_005139.1 </td> <td> M63310 </td> <td> annexin A3 </td> <td> ANXA3 </td> <td> 306 </td> <td> NM_005139 /// XM_005262973 </td> <td> 0006909 // phagocytosis // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0042742 // defense response to bacterium // inferred from direct assay /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043312 // neutrophil degranulation // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // inferred from direct assay /// 0042581 // specific granule // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0019834 // phospholipase A2 inhibitor activity // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> -20.08 </td> <td> 148.59 </td> <td> -0.78 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 204495_s_at </td> <td> 204495_s_at </td> <td> NM_015492 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015492.1 /DEF=Homo sapiens DKFZP434H132 protein (DKFZP434H132), mRNA. /FEA=mRNA /GEN=DKFZP434H132 /PROD=DKFZP434H132 protein /DB_XREF=gi:7661575 /UG=Hs.17936 DKFZP434H132 protein /FL=gb:BC000540.1 gb:NM_015492.1 </td> <td> NM_015492 </td> <td> chromosome 15 open reading frame 39 </td> <td> C15orf39 </td> <td> 56905 </td> <td> NM_015492 /// XM_005254551 /// XM_006720613 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from direct assay </td> <td>  </td> <td> -12.93 </td> <td> 108.59 </td> <td> -0.78 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 213646_x_at </td> <td> 213646_x_at </td> <td> BE300252 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE300252 /FEA=EST /DB_XREF=gi:9184000 /DB_XREF=est:600944004T1 /CLONE=IMAGE:2960280 /UG=Hs.240615 hypothetical protein FLJ13556 similar to N-myc downstream regulated 3 </td> <td> BE300252 </td> <td> tubulin, alpha 1b </td> <td> TUBA1B </td> <td> 10376 </td> <td> NM_006082 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // traceable author statement /// 0030705 // cytoskeleton-dependent intracellular transport // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051301 // cell division // traceable author statement /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 242.55 </td> <td> 3843.50 </td> <td> 0.78 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218439_s_at </td> <td> 218439_s_at </td> <td> NM_016144 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016144.1 /DEF=Homo sapiens PTD002 protein (PTD002), mRNA. /FEA=mRNA /GEN=PTD002 /PROD=PTD002 protein /DB_XREF=gi:7706662 /UG=Hs.41767 PTD002 protein /FL=gb:BC005179.1 gb:AF078857.1 gb:NM_016144.1 </td> <td> NM_016144 </td> <td> COMM domain containing 10 </td> <td> COMMD10 </td> <td> 51397 </td> <td> NM_016144 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 34.15 </td> <td> 250.12 </td> <td> 0.78 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 207040_s_at </td> <td> 207040_s_at </td> <td> NM_003932 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003932.1 /DEF=Homo sapiens suppression of tumorigenicity 13 (colon carcinoma) (Hsp70-interacting protein) (ST13), mRNA.  /FEA=mRNA /GEN=ST13 /PROD=progesterone receptor-associated p48 protein /DB_XREF=gi:4505562 /UG=Hs.119222 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70-interacting protein) /FL=gb:NM_003932.1 gb:U28918.1 </td> <td> NM_003932 </td> <td> suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) </td> <td> ST13 </td> <td> 6767 </td> <td> NM_001278589 /// NM_003932 </td> <td> 0006457 // protein folding // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0061084 // negative regulation of protein refolding // inferred from electronic annotation /// 0070389 // chaperone cofactor-dependent protein refolding // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // traceable author statement /// 0032403 // protein complex binding // inferred from electronic annotation /// 0032564 // dATP binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation </td> <td> -51.28 </td> <td> 1074.79 </td> <td> -0.78 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 216187_x_at </td> <td> 216187_x_at </td> <td> AF222691 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF222691.1 /DEF=Homo sapiens Alu repeat (LNX1) mRNA sequence. /FEA=mRNA /DB_XREF=gi:12655850 /UG=Hs.307008 Homo sapiens Alu repeat (LNX1) mRNA sequence </td> <td> AF222691 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 32.50 </td> <td> 205.50 </td> <td> 0.78 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 200902_at </td> <td> 200902_at </td> <td> NM_004261 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004261.1 /DEF=Homo sapiens 15 kDa selenoprotein (SEP15), mRNA. /FEA=mRNA /GEN=SEP15 /PROD=15 kDa selenoprotein /DB_XREF=gi:4759095 /UG=Hs.90606 15 kDa selenoprotein /FL=gb:AF288991.1 gb:BC005294.1 gb:AF051894.1 gb:NM_004261.1 </td> <td> NM_004261 </td> <td> 15 kDa selenoprotein </td> <td> SEP15 </td> <td> 9403 </td> <td> NM_004261 /// NM_203341 </td> <td> 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008430 // selenium binding // inferred from direct assay </td> <td> 40.42 </td> <td> 405.59 </td> <td> 0.78 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 201694_s_at </td> <td> 201694_s_at </td> <td> NM_001964 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001964.1 /DEF=Homo sapiens early growth response 1 (EGR1), mRNA. /FEA=mRNA /GEN=EGR1 /PROD=early growth response 1 /DB_XREF=gi:4503492 /UG=Hs.326035 early growth response 1 /FL=gb:M62829.1 gb:NM_001964.1 </td> <td> NM_001964 </td> <td> early growth response 1 </td> <td> EGR1 </td> <td> 1958 </td> <td> NM_001964 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0007611 // learning or memory // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032354 // response to follicle-stimulating hormone // inferred from electronic annotation /// 0032868 // response to insulin // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0033233 // regulation of protein sumoylation // inferred from direct assay /// 0034465 // response to carbon monoxide // inferred from electronic annotation /// 0034698 // response to gonadotropin // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0035914 // skeletal muscle cell differentiation // not recorded /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // not recorded /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048169 // regulation of long-term neuronal synaptic plasticity // not recorded /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0070498 // interleukin-1-mediated signaling pathway // inferred from mutant phenotype /// 0071236 // cellular response to antibiotic // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071317 // cellular response to isoquinoline alkaloid // inferred from electronic annotation /// 0071320 // cellular response to cAMP // not recorded /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071371 // cellular response to gonadotropin stimulus // not recorded /// 0071372 // cellular response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0071383 // cellular response to steroid hormone stimulus // inferred from electronic annotation /// 0071455 // cellular response to hyperoxia // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 0071480 // cellular response to gamma radiation // inferred from electronic annotation /// 0071504 // cellular response to heparin // inferred from sequence or structural similarity /// 0071506 // cellular response to mycophenolic acid // inferred from sequence or structural similarity /// 0071873 // response to norepinephrine // inferred from electronic annotation /// 0072110 // glomerular mesangial cell proliferation // inferred from sequence or structural similarity /// 0072303 // positive regulation of glomerular metanephric mesangial cell proliferation // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity </td> <td> 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0000982 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 13.37 </td> <td> 96.44 </td> <td> 0.78 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 218239_s_at </td> <td> 218239_s_at </td> <td> NM_012341 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012341.1 /DEF=Homo sapiens GTP-binding protein (NGB), mRNA. /FEA=mRNA /GEN=NGB /PROD=GTP-binding protein /DB_XREF=gi:6912531 /UG=Hs.215766 GTP-binding protein /FL=gb:AF325353.1 gb:AF120334.1 gb:NM_012341.1 </td> <td> NM_012341 </td> <td> GTP binding protein 4 </td> <td> GTPBP4 </td> <td> 23560 </td> <td> NM_012341 /// XM_006717437 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0015684 // ferrous iron transport // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0033342 // negative regulation of collagen binding // inferred from mutant phenotype /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0015093 // ferrous iron transmembrane transporter activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 16.85 </td> <td> 214.93 </td> <td> 0.78 </td> <td> 0.46 </td> <td> 0.54 </td> <td> -4.60 </td> </tr>
  <tr> <td> 207760_s_at </td> <td> 207760_s_at </td> <td> NM_006312 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006312.1 /DEF=Homo sapiens nuclear receptor co-repressor 2 (NCOR2), mRNA. /FEA=mRNA /GEN=NCOR2 /PROD=nuclear receptor co-repressor 2 /DB_XREF=gi:5454073 /UG=Hs.287994 nuclear receptor co-repressor 2 /FL=gb:AF113003.1 gb:NM_006312.1 </td> <td> NM_006312 </td> <td> nuclear receptor corepressor 2 </td> <td> NCOR2 </td> <td> 9612 </td> <td> NM_001077261 /// NM_001206654 /// NM_006312 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007595 // lactation // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021846 // cell proliferation in forebrain // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042698 // ovulation cycle // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0060206 // estrous cycle phase // inferred from electronic annotation /// 0060509 // Type I pneumocyte differentiation // inferred from electronic annotation /// 0072365 // regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype </td> <td> 0000118 // histone deacetylase complex // inferred from electronic annotation /// 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016604 // nuclear body // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay </td> <td> 0001012 // RNA polymerase II regulatory region DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0005112 // Notch binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016922 // ligand-dependent nuclear receptor binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0035259 // glucocorticoid receptor binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> 17.75 </td> <td> 395.30 </td> <td> 0.77 </td> <td> 0.46 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 222329_x_at </td> <td> 222329_x_at </td> <td> AW974816 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW974816 /FEA=EST /DB_XREF=gi:8166019 /DB_XREF=est:EST386921 /UG=Hs.283517 ESTs, Weakly similar to ALU1_HUMAN ALU SUBFAMILY J SEQUENCE CONTAMINATION WARNING ENTRY H.sapiens </td> <td> AW974816 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 14.50 </td> <td> 72.78 </td> <td> 0.77 </td> <td> 0.46 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218391_at </td> <td> 218391_at </td> <td> NM_007241 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007241.1 /DEF=Homo sapiens EAP30 subunit of ELL complex (EAP30), mRNA. /FEA=mRNA /GEN=EAP30 /PROD=EAP30 subunit of ELL complex /DB_XREF=gi:6005754 /UG=Hs.132785 EAP30 subunit of ELL complex /FL=gb:AF156102.1 gb:NM_007241.1 </td> <td> NM_007241 </td> <td> SNF8, ESCRT-II complex subunit </td> <td> SNF8 </td> <td> 11267 </td> <td> NM_007241 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction </td> <td> -17.05 </td> <td> 323.10 </td> <td> -0.77 </td> <td> 0.46 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217855_x_at </td> <td> 217855_x_at </td> <td> NM_016547 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016547.1 /DEF=Homo sapiens calcium binding protein Cab45 precursor, (LOC51767), mRNA.  /FEA=mRNA /GEN=LOC51767 /PROD=calcium binding protein Cab45 precursor, /DB_XREF=gi:7706572 /UG=Hs.42806 calcium binding protein Cab45 precursor, /FL=gb:AF178986.1 gb:NM_016547.1 </td> <td> NM_016547 </td> <td> stromal cell derived factor 4 </td> <td> SDF4 </td> <td> 51150 </td> <td> NM_016176 /// NM_016547 </td> <td> 0006887 // exocytosis // inferred from electronic annotation /// 0009650 // UV protection // inferred from sequence or structural similarity /// 0017156 // calcium ion-dependent exocytosis // inferred from sequence or structural similarity /// 0021549 // cerebellum development // inferred from sequence or structural similarity /// 0045444 // fat cell differentiation // inferred from sequence or structural similarity /// 0045471 // response to ethanol // inferred from sequence or structural similarity /// 0070625 // zymogen granule exocytosis // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005796 // Golgi lumen // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0032059 // bleb // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -56.20 </td> <td> 501.77 </td> <td> -0.77 </td> <td> 0.46 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208246_x_at </td> <td> 208246_x_at </td> <td> NM_017618 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017618.1 /DEF=Homo sapiens hypothetical protein FLJ20006 (FLJ20006), mRNA. /FEA=mRNA /GEN=FLJ20006 /PROD=hypothetical protein FLJ20006 /DB_XREF=gi:8923014 /UG=Hs.279007 hypothetical protein FLJ20006 /FL=gb:NM_017618.1 </td> <td> NM_017618 </td> <td>  </td> <td> RP11-403P17.4 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 16.75 </td> <td> 90.42 </td> <td> 0.77 </td> <td> 0.46 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217926_at </td> <td> 217926_at </td> <td> NM_014047 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014047.1 /DEF=Homo sapiens HSPC023 protein (HSPC023), mRNA. /FEA=mRNA /GEN=HSPC023 /PROD=HSPC023 protein /DB_XREF=gi:7661741 /UG=Hs.279945 HSPC023 protein /FL=gb:AF078852.1 gb:NM_014047.1 </td> <td> NM_014047 </td> <td> chromosome 19 open reading frame 53 </td> <td> C19orf53 </td> <td> 28974 </td> <td> NM_014047 </td> <td>  </td> <td>  </td> <td>  </td> <td> 18.05 </td> <td> 348.57 </td> <td> 0.77 </td> <td> 0.46 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201897_s_at </td> <td> 201897_s_at </td> <td> NM_001826 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001826.1 /DEF=Homo sapiens CDC28 protein kinase 1 (CKS1), mRNA. /FEA=mRNA /GEN=CKS1 /PROD=CDC28 protein kinase 1 /DB_XREF=gi:4502856 /UG=Hs.77550 CDC28 protein kinase 1 /FL=gb:BC001425.1 gb:AF274941.1 gb:AF279897.1 gb:NM_001826.1 </td> <td> NM_001826 </td> <td> CDC28 protein kinase regulatory subunit 1B </td> <td> CKS1B </td> <td> 1163 </td> <td> NM_001826 /// NR_024163 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005654 // nucleoplasm // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016538 // cyclin-dependent protein serine/threonine kinase regulator activity // inferred from electronic annotation </td> <td> -21.90 </td> <td> 281.45 </td> <td> -0.77 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208921_s_at </td> <td> 208921_s_at </td> <td> L12387 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L12387.1 /DEF=Human sorcin (SRI) mRNA, complete cds. /FEA=mRNA /GEN=SRI /PROD=sorcin /DB_XREF=gi:459835 /UG=Hs.300741 sorcin /FL=gb:M32886.1 gb:NM_003130.1 gb:L12387.1 </td> <td> L12387 </td> <td> sorcin </td> <td> SRI </td> <td> 6717 </td> <td> NM_001256891 /// NM_001256892 /// NM_003130 /// NM_198901 /// XM_006716097 </td> <td> 0001508 // action potential // traceable author statement /// 0006508 // proteolysis // not recorded /// 0006810 // transport // traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006880 // intracellular sequestering of iron ion // traceable author statement /// 0006942 // regulation of striated muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007507 // heart development // traceable author statement /// 0007517 // muscle organ development // traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0010459 // negative regulation of heart rate // inferred from mutant phenotype /// 0010649 // regulation of cell communication by electrical coupling // traceable author statement /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // traceable author statement /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from electronic annotation /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051924 // regulation of calcium ion transport // inferred from mutant phenotype /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0086004 // regulation of cardiac muscle cell contraction // inferred from mutant phenotype /// 1901077 // regulation of relaxation of muscle // inferred from mutant phenotype /// 1901841 // regulation of high voltage-gated calcium channel activity // inferred from mutant phenotype /// 1901844 // regulation of cell communication by electrical coupling involved in cardiac conduction // inferred from mutant phenotype /// 2000678 // negative regulation of transcription regulatory region DNA binding // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // traceable author statement /// 0030018 // Z disc // inferred from direct assay /// 0030315 // T-tubule // traceable author statement /// 0031982 // vesicle // inferred from electronic annotation /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0042584 // chromaffin granule membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // not recorded /// 0005102 // receptor binding // traceable author statement /// 0005246 // calcium channel regulator activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044325 // ion channel binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0070491 // repressing transcription factor binding // inferred from electronic annotation </td> <td> -24.65 </td> <td> 818.80 </td> <td> -0.77 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201222_s_at </td> <td> 201222_s_at </td> <td> AL527365 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL527365 /FEA=EST /DB_XREF=gi:12790858 /DB_XREF=est:AL527365 /CLONE=CS0DC021YG08 (5 prime) /UG=Hs.178658 RAD23 (S. cerevisiae) homolog B /FL=gb:NM_002874.1 gb:D21090.1 </td> <td> AL527365 </td> <td> RAD23 homolog B (S. cerevisiae) </td> <td> RAD23B </td> <td> 5887 </td> <td> NM_001244713 /// NM_001244724 /// NM_002874 </td> <td> 0000715 // nucleotide-excision repair, DNA damage recognition // inferred from direct assay /// 0000715 // nucleotide-excision repair, DNA damage recognition // traceable author statement /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0071942 // XPC complex // inferred from direct assay </td> <td> 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay </td> <td> 28.05 </td> <td> 441.07 </td> <td> 0.77 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 214629_x_at </td> <td> 214629_x_at </td> <td> AF320999 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF320999.1 /DEF=Homo sapiens Nogo-A protein short form mRNA, complete cds, alternatively spliced.  /FEA=CDS /PROD=Nogo-A protein short form /DB_XREF=gi:11878277 /UG=Hs.65450 reticulon 4 /FL=gb:AF320999.1 </td> <td> AF320999 </td> <td> reticulon 4 </td> <td> RTN4 </td> <td> 57142 </td> <td> NM_007008 /// NM_020532 /// NM_153828 /// NM_207520 /// NM_207521 /// XM_005264434 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007413 // axonal fasciculation // inferred from sequence or structural similarity /// 0021801 // cerebral cortex radial glia guided migration // inferred from sequence or structural similarity /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030334 // regulation of cell migration // inferred from direct assay /// 0030517 // negative regulation of axon extension // inferred from direct assay /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0051960 // regulation of nervous system development // inferred from electronic annotation /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from electronic annotation /// 0071786 // endoplasmic reticulum tubular network organization // inferred from mutant phenotype /// 2000172 // regulation of branching morphogenesis of a nerve // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from mutant phenotype /// 0005635 // nuclear envelope // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 130.08 </td> <td> 1558.44 </td> <td> 0.77 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201109_s_at </td> <td> 201109_s_at </td> <td> AV726673 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV726673 /FEA=EST /DB_XREF=gi:10836094 /DB_XREF=est:AV726673 /CLONE=HTCBGC12 /UG=Hs.87409 thrombospondin 1 /FL=gb:NM_003246.1 </td> <td> AV726673 </td> <td> thrombospondin 1 </td> <td> THBS1 </td> <td> 7057 </td> <td> NM_003246 </td> <td> 0000187 // activation of MAPK activity // inferred from mutant phenotype /// 0001666 // response to hypoxia // non-traceable author statement /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001953 // negative regulation of cell-matrix adhesion // inferred from direct assay /// 0002040 // sprouting angiogenesis // inferred from mutant phenotype /// 0002544 // chronic inflammatory response // inferred from expression pattern /// 0002576 // platelet degranulation // traceable author statement /// 0002581 // negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from direct assay /// 0002605 // negative regulation of dendritic cell antigen processing and presentation // inferred from direct assay /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from expression pattern /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007155 // cell adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from direct assay /// 0010748 // negative regulation of plasma membrane long-chain fatty acid transport // inferred from direct assay /// 0010751 // negative regulation of nitric oxide mediated signal transduction // inferred from direct assay /// 0010754 // negative regulation of cGMP-mediated signaling // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from direct assay /// 0010759 // positive regulation of macrophage chemotaxis // inferred from sequence or structural similarity /// 0010763 // positive regulation of fibroblast migration // inferred from direct assay /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0018149 // peptide cross-linking // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from direct assay /// 0032570 // response to progesterone // traceable author statement /// 0032695 // negative regulation of interleukin-12 production // inferred from direct assay /// 0032914 // positive regulation of transforming growth factor beta1 production // inferred from sequence or structural similarity /// 0033574 // response to testosterone // inferred from electronic annotation /// 0034605 // cellular response to heat // non-traceable author statement /// 0034976 // response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from expression pattern /// 0042535 // positive regulation of tumor necrosis factor biosynthetic process // inferred from direct assay /// 0043032 // positive regulation of macrophage activation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043652 // engulfment of apoptotic cell // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0048266 // behavioral response to pain // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050921 // positive regulation of chemotaxis // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0051895 // negative regulation of focal adhesion assembly // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling // inferred from direct assay /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071636 // positive regulation of transforming growth factor beta production // inferred from electronic annotation /// 1900119 // positive regulation of execution phase of apoptosis // inferred from direct assay /// 1902043 // positive regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005577 // fibrinogen complex // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from sequence or structural similarity /// 0030141 // secretory granule // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // traceable author statement /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001786 // phosphatidylserine binding // inferred from direct assay /// 0001948 // glycoprotein binding // non-traceable author statement /// 0001968 // fibronectin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from mutant phenotype /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0030169 // low-density lipoprotein particle binding // inferred from direct assay /// 0042802 // identical protein binding // non-traceable author statement /// 0043236 // laminin binding // inferred from direct assay /// 0043394 // proteoglycan binding // traceable author statement /// 0050431 // transforming growth factor beta binding // inferred from sequence or structural similarity /// 0050431 // transforming growth factor beta binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation /// 0070051 // fibrinogen binding // inferred from direct assay /// 0070052 // collagen V binding // inferred from direct assay </td> <td> -136.00 </td> <td> 2635.00 </td> <td> -0.77 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201672_s_at </td> <td> 201672_s_at </td> <td> NM_005151 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005151.1 /DEF=Homo sapiens ubiquitin specific protease 14 (tRNA-guanine transglycosylase) (USP14), mRNA.  /FEA=mRNA /GEN=USP14 /PROD=ubiquitin specific protease 14 (tRNA-guaninetransglycosylase) /DB_XREF=gi:4827049 /UG=Hs.75981 ubiquitin specific protease 14 (tRNA-guanine transglycosylase) /FL=gb:BC003556.1 gb:NM_005151.1 gb:U30888.1 </td> <td> NM_005151 </td> <td> ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) </td> <td> USP14 </td> <td> 9097 </td> <td> NM_001037334 /// NM_005151 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from mutant phenotype /// 0016579 // protein deubiquitination // inferred from direct assay /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0061136 // regulation of proteasomal protein catabolic process // inferred from mutant phenotype </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004866 // endopeptidase inhibitor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008193 // tRNA guanylyltransferase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation /// 0070628 // proteasome binding // inferred from direct assay </td> <td> -27.57 </td> <td> 789.86 </td> <td> -0.77 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216640_s_at </td> <td> 216640_s_at </td> <td> AK026926 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026926.1 /DEF=Homo sapiens cDNA: FLJ23273 fis, clone HEP02611, highly similar to HSU79278 Human protein disulfide isomerase-related protein P5 mRNA.  /FEA=mRNA /DB_XREF=gi:10439898 /UG=Hs.182429 protein disulfide isomerase-related protein </td> <td> AK026926 </td> <td> protein disulfide isomerase family A, member 6 </td> <td> PDIA6 </td> <td> 10130 </td> <td> NM_001282704 /// NM_001282705 /// NM_001282706 /// NM_001282707 /// NM_005742 /// XM_005246145 /// XM_006711856 </td> <td> 0006457 // protein folding // not recorded /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0034976 // response to endoplasmic reticulum stress // not recorded /// 0043277 // apoptotic cell clearance // not recorded /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // not recorded /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003756 // protein disulfide isomerase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation </td> <td> -74.85 </td> <td> 1051.67 </td> <td> -0.77 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218686_s_at </td> <td> 218686_s_at </td> <td> NM_022450 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022450.1 /DEF=Homo sapiens hypothetical protein FLJ22357 similar to epidermal growth factor receptor-related protein (FLJ22357), mRNA.  /FEA=mRNA /GEN=FLJ22357 /PROD=hypothetical protein FLJ22357 similar toepidermal growth factor receptor-related  protein /DB_XREF=gi:11967982 /UG=Hs.57988 hypothetical protein FLJ22357 similar to epidermal growth factor receptor-related  protein /FL=gb:NM_022450.1 </td> <td> NM_022450 </td> <td> rhomboid 5 homolog 1 (Drosophila) </td> <td> RHBDF1 </td> <td> 64285 </td> <td> NM_022450 /// XM_005255494 /// XM_005255498 /// XM_006720918 /// XM_006720919 /// XM_006720920 /// XM_006720921 /// XM_006720922 /// XR_429644 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0042058 // regulation of epidermal growth factor receptor signaling pathway // inferred from mutant phenotype /// 0050708 // regulation of protein secretion // inferred from mutant phenotype /// 0050709 // negative regulation of protein secretion // inferred from direct assay /// 0061136 // regulation of proteasomal protein catabolic process // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0019838 // growth factor binding // inferred from electronic annotation </td> <td> -21.17 </td> <td> 198.86 </td> <td> -0.76 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201505_at </td> <td> 201505_at </td> <td> NM_002291 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002291.1 /DEF=Homo sapiens laminin, beta 1 (LAMB1), mRNA. /FEA=mRNA /GEN=LAMB1 /PROD=laminin, beta 1 precursor /DB_XREF=gi:4504950 /UG=Hs.82124 laminin, beta 1 /FL=gb:M61916.1 gb:NM_002291.1 </td> <td> NM_002291 </td> <td> laminin, beta 1 </td> <td> LAMB1 </td> <td> 3912 </td> <td> NM_002291 </td> <td> 0007155 // cell adhesion // traceable author statement /// 0007162 // negative regulation of cell adhesion // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021812 // neuronal-glial interaction involved in cerebral cortex radial glia guided migration // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0031175 // neuron projection development // inferred from direct assay /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0042476 // odontogenesis // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005604 // basement membrane // traceable author statement /// 0005605 // basal lamina // inferred from electronic annotation /// 0005606 // laminin-1 complex // inferred from direct assay /// 0005606 // laminin-1 complex // inferred from physical interaction /// 0005606 // laminin-1 complex // traceable author statement /// 0005607 // laminin-2 complex // inferred from direct assay /// 0005607 // laminin-2 complex // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0043256 // laminin complex // inferred from electronic annotation /// 0043257 // laminin-8 complex // inferred from direct assay /// 0043257 // laminin-8 complex // traceable author statement /// 0043259 // laminin-10 complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005178 // integrin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0043208 // glycosphingolipid binding // inferred from electronic annotation </td> <td> -30.38 </td> <td> 518.41 </td> <td> -0.76 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 221476_s_at </td> <td> 221476_s_at </td> <td> AF279903 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF279903.1 /DEF=Homo sapiens 60S ribosomal protein L15 (EC45) mRNA, complete cds. /FEA=mRNA /GEN=EC45 /PROD=60S ribosomal protein L15 /DB_XREF=gi:12006349 /UG=Hs.74267 ribosomal protein L15 /FL=gb:AF279903.1 gb:L25899.1 gb:NM_002948.1 </td> <td> AF279903 </td> <td> ribosomal protein L15 </td> <td> RPL15 </td> <td> 6138 </td> <td> NM_001253379 /// NM_001253380 /// NM_001253382 /// NM_001253383 /// NM_001253384 /// NM_002948 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // traceable author statement /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -58.95 </td> <td> 1580.40 </td> <td> -0.76 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201001_s_at </td> <td> 201001_s_at </td> <td> BG164064 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG164064 /FEA=EST /DB_XREF=gi:12670767 /DB_XREF=est:602341091F1 /CLONE=IMAGE:4449022 /UG=Hs.75875 ubiquitin-conjugating enzyme E2 variant 1 /FL=gb:U39361.1 gb:NM_003349.2 gb:BC000468.1 </td> <td> BG164064 </td> <td> transmembrane protein 189 /// TMEM189-UBE2V1 readthrough /// ubiquitin-conjugating enzyme E2 variant 1 /// ubiquitin-conjugating enzyme E2 variant 2 </td> <td> TMEM189 /// TMEM189-UBE2V1 /// UBE2V1 /// UBE2V2 </td> <td> 7335 /// 7336 /// 387521 /// 387522 </td> <td> NM_001032288 /// NM_001162505 /// NM_001257393 /// NM_001257394 /// NM_001257395 /// NM_001257396 /// NM_001257397 /// NM_001257398 /// NM_001257399 /// NM_001282575 /// NM_001282576 /// NM_001282577 /// NM_001282578 /// NM_001282579 /// NM_001282580 /// NM_003349 /// NM_003350 /// NM_021988 /// NM_022442 /// NM_199129 /// NM_199144 /// NM_199203 /// NR_027889 /// NR_047554 /// NR_104218 /// XM_005251300 </td> <td> 0000209 // protein polyubiquitination // traceable author statement /// 0000729 // DNA double-strand break processing // inferred from mutant phenotype /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0006282 // regulation of DNA repair // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045739 // positive regulation of DNA repair // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051965 // positive regulation of synapse assembly // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031371 // ubiquitin conjugating enzyme complex // inferred from direct assay /// 0031372 // UBC13-MMS2 complex // inferred from direct assay /// 0035370 // UBC13-UEV1A complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> -18.67 </td> <td> 308.11 </td> <td> -0.76 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 214305_s_at </td> <td> 214305_s_at </td> <td> AW003030 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW003030 /FEA=EST /DB_XREF=gi:5849868 /DB_XREF=est:wq61e04.x1 /CLONE=IMAGE:2475774 /UG=Hs.13453 splicing factor 3b, subunit 1, 155kD </td> <td> AW003030 </td> <td> splicing factor 3b, subunit 1, 155kDa </td> <td> SF3B1 </td> <td> 23451 </td> <td> NM_001005526 /// NM_012433 /// XM_005246428 /// XR_241300 /// XR_241301 /// XR_241302 </td> <td> 0000375 // RNA splicing, via transesterification reactions // non-traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // non-traceable author statement /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -36.93 </td> <td> 365.79 </td> <td> -0.76 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 214754_at </td> <td> 214754_at </td> <td> AB007861 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB007861.1 /DEF=Homo sapiens KIAA0401 mRNA, partial cds. /FEA=mRNA /GEN=KIAA0401 /DB_XREF=gi:2662082 /UG=Hs.17803 KIAA0401 protein </td> <td> AB007861 </td> <td> tet methylcytosine dioxygenase 3 </td> <td> TET3 </td> <td> 200424 </td> <td> NM_001287491 /// NM_144993 /// XM_005264187 /// XM_006711963 </td> <td> 0006493 // protein O-linked glycosylation // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0044727 // DNA demethylation of male pronucleus // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0080111 // DNA demethylation // inferred from sequence or structural similarity /// 0080182 // histone H3-K4 trimethylation // inferred from mutant phenotype </td> <td> 0001939 // female pronucleus // inferred from electronic annotation /// 0001940 // male pronucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation /// 0070579 // methylcytosine dioxygenase activity // inferred from sequence or structural similarity </td> <td> -10.13 </td> <td> 32.84 </td> <td> -0.76 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 204420_at </td> <td> 204420_at </td> <td> BG251266 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG251266 /FEA=EST /DB_XREF=gi:12761082 /DB_XREF=est:602365892F1 /CLONE=IMAGE:4474055 /UG=Hs.283565 FOS-like antigen-1 /FL=gb:NM_005438.1 </td> <td> BG251266 </td> <td> FOS-like antigen 1 </td> <td> FOSL1 </td> <td> 8061 </td> <td> NM_005438 /// XM_005274311 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0007296 // vitellogenesis // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0009629 // response to gravity // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0032570 // response to progesterone // inferred from electronic annotation /// 0034097 // response to cytokine // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0060674 // placenta blood vessel development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 13.12 </td> <td> 190.49 </td> <td> 0.76 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 49327_at </td> <td> 49327_at </td> <td> AI492888 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI492888:th78c09.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2124784 /clone_end=3' /gb=AI492888 /gi=4393891 /ug=Hs.19306 /len=596 </td> <td> AI492888 </td> <td> sirtuin 3 </td> <td> SIRT3 </td> <td> 23410 </td> <td> NM_001017524 /// NM_012239 /// XM_005252835 </td> <td> 0006471 // protein ADP-ribosylation // traceable author statement /// 0006476 // protein deacetylation // inferred from direct assay /// 0009060 // aerobic respiration // inferred from mutant phenotype /// 0034983 // peptidyl-lysine deacetylation // inferred from mutant phenotype /// 0070932 // histone H3 deacetylation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation /// 0070403 // NAD+ binding // inferred from electronic annotation </td> <td> -10.83 </td> <td> 148.24 </td> <td> -0.76 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 221437_s_at </td> <td> 221437_s_at </td> <td> NM_031280 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031280.1 /DEF=Homo sapiens mitochondrial ribosomal protein S15 (MRPS15), mRNA. /FEA=CDS /GEN=MRPS15 /PROD=mitochondrial ribosomal protein S15 /DB_XREF=gi:13775191 /FL=gb:NM_031280.1 </td> <td> NM_031280 </td> <td> mitochondrial ribosomal protein S15 </td> <td> MRPS15 </td> <td> 64960 </td> <td> NM_031280 </td> <td> 0006412 // translation // non-traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005763 // mitochondrial small ribosomal subunit // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 12.97 </td> <td> 113.39 </td> <td> 0.76 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203386_at </td> <td> 203386_at </td> <td> AI650848 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI650848 /FEA=EST /DB_XREF=gi:4734827 /DB_XREF=est:wa95d04.x1 /CLONE=IMAGE:2303911 /UG=Hs.173802 KIAA0603 gene product /FL=gb:AB011175.1 gb:NM_014832.1 </td> <td> AI650848 </td> <td> TBC1 domain family, member 4 </td> <td> TBC1D4 </td> <td> 9882 </td> <td> NM_001286658 /// NM_001286659 /// NM_014832 /// XM_005266603 /// XM_005266605 /// XM_006719902 /// XM_006719903 </td> <td> 0016192 // vesicle-mediated transport // inferred from mutant phenotype /// 0031339 // negative regulation of vesicle fusion // inferred from electronic annotation /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 27.55 </td> <td> 218.80 </td> <td> 0.76 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200658_s_at </td> <td> 200658_s_at </td> <td> AL560017 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL560017 /FEA=EST /DB_XREF=gi:12906073 /DB_XREF=est:AL560017 /CLONE=CS0DG004YD08 (5 prime) /UG=Hs.75323 prohibitin /FL=gb:NM_002634.2 </td> <td> AL560017 </td> <td> prohibitin </td> <td> PHB </td> <td> 5245 </td> <td> NM_001281496 /// NM_001281497 /// NM_001281715 /// NM_002634 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0016575 // histone deacetylation // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0042981 // regulation of apoptotic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0050847 // progesterone receptor signaling pathway // inferred from direct assay /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from direct assay /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 0071354 // cellular response to interleukin-6 // inferred from direct assay /// 0071897 // DNA biosynthetic process // inferred from electronic annotation /// 2000323 // negative regulation of glucocorticoid receptor signaling pathway // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay </td> <td> -17.80 </td> <td> 303.82 </td> <td> -0.76 </td> <td> 0.47 </td> <td> 0.55 </td> <td> -4.61 </td> </tr>
  <tr> <td> 206200_s_at </td> <td> 206200_s_at </td> <td> NM_001157 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001157.1 /DEF=Homo sapiens annexin A11 (ANXA11), mRNA. /FEA=mRNA /GEN=ANXA11 /PROD=annexin XI /DB_XREF=gi:4557316 /UG=Hs.75510 annexin A11 /FL=gb:NM_001157.1 gb:L19605.1 </td> <td> NM_001157 </td> <td> annexin A11 </td> <td> ANXA11 </td> <td> 311 </td> <td> NM_001157 /// NM_001278407 /// NM_001278408 /// NM_001278409 /// NM_145868 /// NM_145869 /// XM_005269741 /// XM_005269742 /// XM_006717813 /// XM_006717814 </td> <td> 0006909 // phagocytosis // inferred from expression pattern /// 0007049 // cell cycle // inferred from electronic annotation /// 0007109 // cytokinesis, completion of separation // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // non-traceable author statement /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0042581 // specific granule // inferred from direct assay /// 0042582 // azurophil granule // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0008429 // phosphatidylethanolamine binding // inferred from electronic annotation /// 0023026 // MHC class II protein complex binding // inferred from direct assay /// 0044548 // S100 protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> 15.80 </td> <td> 174.62 </td> <td> 0.76 </td> <td> 0.47 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209861_s_at </td> <td> 209861_s_at </td> <td> U13261 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U13261.1 /DEF=Homo sapiens eIF-2-associated p67 homolog mRNA, complete cds. /FEA=mRNA /PROD=eIF-2-associated p67 homolog /DB_XREF=gi:687242 /UG=Hs.78935 methionine aminopeptidase; eIF-2-associated p67 /FL=gb:U13261.1 </td> <td> U13261 </td> <td> methionyl aminopeptidase 2 </td> <td> METAP2 </td> <td> 10988 </td> <td> NM_006838 /// XM_005268583 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0007603 // phototransduction, visible light // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0018206 // peptidyl-methionine modification // inferred from direct assay /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0031365 // N-terminal protein amino acid modification // inferred from direct assay /// 0070084 // protein initiator methionine removal // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0004177 // aminopeptidase activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008235 // metalloexopeptidase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070006 // metalloaminopeptidase activity // inferred from electronic annotation </td> <td> -26.17 </td> <td> 319.49 </td> <td> -0.75 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 214752_x_at </td> <td> 214752_x_at </td> <td> AI625550 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI625550 /FEA=EST /DB_XREF=gi:4650481 /DB_XREF=est:ty57d06.x1 /CLONE=IMAGE:2283179 /UG=Hs.195464 filamin A, alpha (actin-binding protein-280) </td> <td> AI625550 </td> <td> filamin A, alpha </td> <td> FLNA </td> <td> 2316 </td> <td> NM_001110556 /// NM_001456 </td> <td> 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0007195 // adenylate cyclase-inhibiting dopamine receptor signaling pathway // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0034329 // cell junction assembly // traceable author statement /// 0034394 // protein localization to cell surface // inferred from direct assay /// 0042177 // negative regulation of protein catabolic process // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from mutant phenotype /// 0043113 // receptor clustering // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045022 // early endosome to late endosome transport // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from direct assay /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0051220 // cytoplasmic sequestering of protein // inferred from mutant phenotype /// 0051764 // actin crosslink formation // inferred from direct assay /// 0090307 // spindle assembly involved in mitosis // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred by curator /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031523 // Myb complex // inferred from direct assay /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097440 // apical dendrite // inferred from electronic annotation </td> <td> 0001948 // glycoprotein binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0017048 // Rho GTPase binding // inferred from direct assay /// 0017160 // Ral GTPase binding // inferred from direct assay /// 0031267 // small GTPase binding // inferred from direct assay /// 0031852 // mu-type opioid receptor binding // inferred from electronic annotation /// 0034988 // Fc-gamma receptor I complex binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0048365 // Rac GTPase binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from direct assay </td> <td> -50.45 </td> <td> 733.02 </td> <td> -0.75 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 205091_x_at </td> <td> 205091_x_at </td> <td> NM_002907 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002907.1 /DEF=Homo sapiens RecQ protein-like (DNA helicase Q1-like) (RECQL), mRNA.  /FEA=mRNA /GEN=RECQL /PROD=RecQ protein-like (DNA helicase Q1-like) /DB_XREF=gi:4506468 /UG=Hs.235069 RecQ protein-like (DNA helicase Q1-like) /FL=gb:NM_002907.1 gb:L36140.1 </td> <td> NM_002907 </td> <td> RecQ helicase-like </td> <td> RECQL </td> <td> 5965 </td> <td> NM_002907 /// NM_032941 /// XM_005253461 /// XM_005253462 /// XM_005253463 /// XM_005253464 /// XM_006719133 </td> <td> 0000733 // DNA strand renaturation // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from direct assay /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036310 // annealing helicase activity // inferred from direct assay /// 0043140 // ATP-dependent 3'-5' DNA helicase activity // inferred from electronic annotation </td> <td> 13.35 </td> <td> 107.20 </td> <td> 0.75 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216384_x_at </td> <td> 216384_x_at </td> <td> AF257099 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF257099 /DEF=Homo sapiens prothymosin alpha (PTMA) gene, complete cds /FEA=CDS /DB_XREF=gi:8037944 /UG=Hs.283947 Homo sapiens prothymosin alpha (PTMA) gene, complete cds </td> <td> AF257099 </td> <td> prothymosin alpha-like /// prothymosin alpha-like /// microRNA 1244-1 /// microRNA 1244-2 /// microRNA 1244-3 /// prothymosin, alpha </td> <td> LOC100506248 /// LOC728026 /// MIR1244-1 /// MIR1244-2 /// MIR1244-3 /// PTMA </td> <td> 5757 /// 728026 /// 100302285 /// 100422872 /// 100422885 /// 100506248 </td> <td> NM_001099285 /// NM_002823 /// NR_036052 /// NR_036262 /// NR_036263 /// XM_001126659 /// XM_003960458 /// XM_005275719 /// XM_005276418 </td> <td> 0006351 // transcription, DNA-templated // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> -114.70 </td> <td> 1593.30 </td> <td> -0.75 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 206127_at </td> <td> 206127_at </td> <td> NM_005230 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005230.1 /DEF=Homo sapiens ELK3, ETS-domain protein (SRF accessory protein 2) (ELK3), mRNA.  /FEA=mRNA /GEN=ELK3 /PROD=ELK3 protein /DB_XREF=gi:4885202 /UG=Hs.121529 ELK3, ETS-domain protein (SRF accessory protein 2) /FL=gb:NM_005230.1 </td> <td> NM_005230 </td> <td> ELK3, ETS-domain protein (SRF accessory protein 2) </td> <td> ELK3 </td> <td> 2004 </td> <td> NM_005230 /// XM_006719275 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0007165 // signal transduction // traceable author statement /// 0030154 // cell differentiation // not recorded /// 0042060 // wound healing // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0032422 // purine-rich negative regulatory element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -11.27 </td> <td> 79.94 </td> <td> -0.75 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202647_s_at </td> <td> 202647_s_at </td> <td> NM_002524 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002524.2 /DEF=Homo sapiens neuroblastoma RAS viral (v-ras) oncogene homolog (NRAS), mRNA.  /FEA=mRNA /GEN=NRAS /PROD=neuroblastoma RAS viral (v-ras) oncogenehomolog /DB_XREF=gi:6006027 /UG=Hs.260523 neuroblastoma RAS viral (v-ras) oncogene homolog /FL=gb:BC005219.1 gb:NM_002524.2 </td> <td> NM_002524 </td> <td> neuroblastoma RAS viral (v-ras) oncogene homolog </td> <td> NRAS </td> <td> 4893 </td> <td> NM_002524 </td> <td> 0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007569 // cell aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008542 // visual learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0035022 // positive regulation of Rac protein signal transduction // inferred from electronic annotation /// 0035176 // social behavior // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051385 // response to mineralocorticoid // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0097193 // intrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019002 // GMP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation /// 0030275 // LRR domain binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from direct assay </td> <td> -30.00 </td> <td> 234.05 </td> <td> -0.75 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 205412_at </td> <td> 205412_at </td> <td> NM_000019 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000019.1 /DEF=Homo sapiens acetyl-Coenzyme A acetyltransferase 1 (acetoacetyl Coenzyme A thiolase) (ACAT1), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=ACAT1 /PROD=acetyl-Coenzyme A acetyltransferase 1 precursor /DB_XREF=gi:4557236 /UG=Hs.37 acetyl-Coenzyme A acetyltransferase 1 (acetoacetyl Coenzyme A thiolase) /FL=gb:NM_000019.1 </td> <td> NM_000019 </td> <td> acetyl-CoA acetyltransferase 1 </td> <td> ACAT1 </td> <td> 38 </td> <td> NM_000019 /// XM_006718834 /// XM_006718835 </td> <td> 0001889 // liver development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009083 // branched-chain amino acid catabolic process // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042594 // response to starvation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046950 // cellular ketone body metabolic process // traceable author statement /// 0046951 // ketone body biosynthetic process // traceable author statement /// 0046952 // ketone body catabolic process // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0072229 // metanephric proximal convoluted tubule development // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0003985 // acetyl-CoA C-acetyltransferase activity // not recorded /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from electronic annotation </td> <td> -18.02 </td> <td> 475.31 </td> <td> -0.75 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 207132_x_at </td> <td> 207132_x_at </td> <td> NM_002624 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002624.1 /DEF=Homo sapiens prefoldin 5 (PFDN5), mRNA. /FEA=mRNA /GEN=PFDN5 /PROD=prefoldin 5 /DB_XREF=gi:4505742 /UG=Hs.288856 prefoldin 5 /FL=gb:D89667.1 gb:NM_002624.1 </td> <td> NM_002624 </td> <td> prefoldin subunit 5 </td> <td> PFDN5 </td> <td> 5204 </td> <td> NM_002624 /// NM_145896 /// NM_145897 </td> <td> 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016272 // prefoldin complex // inferred from electronic annotation </td> <td> 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> 28.92 </td> <td> 680.64 </td> <td> 0.75 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201892_s_at </td> <td> 201892_s_at </td> <td> NM_000884 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000884.1 /DEF=Homo sapiens IMP (inosine monophosphate) dehydrogenase 2 (IMPDH2), mRNA.  /FEA=mRNA /GEN=IMPDH2 /PROD=IMP (inosine monophosphate) dehydrogenase 2 /DB_XREF=gi:4504688 /UG=Hs.75432 IMP (inosine monophosphate) dehydrogenase 2 /FL=gb:J04208.1 gb:NM_000884.1 </td> <td> NM_000884 </td> <td> IMP (inosine 5'-monophosphate) dehydrogenase 2 </td> <td> IMPDH2 </td> <td> 3615 </td> <td> NM_000884 /// XM_006713128 </td> <td> 0006051 // N-acetylmannosamine metabolic process // inferred from electronic annotation /// 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006177 // GMP biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046651 // lymphocyte proliferation // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003938 // IMP dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0018580 // nitronate monooxygenase activity // inferred from electronic annotation /// 0030554 // adenyl nucleotide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047465 // N-acylglucosamine-6-phosphate 2-epimerase activity // inferred from electronic annotation </td> <td> -54.55 </td> <td> 609.50 </td> <td> -0.75 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 204629_at </td> <td> 204629_at </td> <td> NM_013327 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013327.1 /DEF=Homo sapiens CGI-56 protein (CGI-56), mRNA. /FEA=mRNA /GEN=CGI-56 /PROD=CGI-56 protein /DB_XREF=gi:7019346 /UG=Hs.8836 beta-parvin /FL=gb:AF237769.1 gb:AF151814.1 gb:NM_013327.1 </td> <td> NM_013327 </td> <td> parvin, beta </td> <td> PARVB </td> <td> 29780 </td> <td> NM_001003828 /// NM_001243385 /// NM_001243386 /// NM_013327 /// XM_005261593 /// XM_005261594 /// XM_005261595 /// XM_005261596 /// XM_006724236 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0030031 // cell projection assembly // inferred from mutant phenotype /// 0030032 // lamellipodium assembly // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0034329 // cell junction assembly // traceable author statement /// 0071963 // establishment or maintenance of cell polarity regulating cell shape // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030017 // sarcomere // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -19.45 </td> <td> 286.00 </td> <td> -0.75 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 212781_at </td> <td> 212781_at </td> <td> AK026954 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026954.1 /DEF=Homo sapiens cDNA: FLJ23301 fis, clone HEP11120. /FEA=mRNA /DB_XREF=gi:10439935 /UG=Hs.91065 hypothetical protein DKFZp761B2423 </td> <td> AK026954 </td> <td> retinoblastoma binding protein 6 </td> <td> RBBP6 </td> <td> 5930 </td> <td> NM_006910 /// NM_018703 /// NM_032626 /// XM_005255461 /// XM_005255462 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0061053 // somite development // inferred from electronic annotation </td> <td> 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -14.10 </td> <td> 114.22 </td> <td> -0.74 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 39854_r_at </td> <td> 39854_r_at </td> <td> AF055000 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AF055000:Homo sapiens clone 24519 unknown mRNA, partial cds /cds=(0,1235) /gb=AF055000 /gi=3005716 /ug=Hs.118463 /len=1590 </td> <td> AF055000 </td> <td> patatin-like phospholipase domain containing 2 </td> <td> PNPLA2 </td> <td> 57104 </td> <td> NM_020376 /// XM_003403858 /// XM_006718265 /// XM_006718266 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010891 // negative regulation of sequestering of triglyceride // inferred from direct assay /// 0010898 // positive regulation of triglyceride catabolic process // inferred from direct assay /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // inferred from electronic annotation /// 0036155 // acylglycerol acyl-chain remodeling // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0004806 // triglyceride lipase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -28.43 </td> <td> 324.59 </td> <td> -0.74 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201816_s_at </td> <td> 201816_s_at </td> <td> NM_001483 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001483.1 /DEF=Homo sapiens glioblastoma amplified sequence (GBAS), mRNA. /FEA=mRNA /GEN=GBAS /PROD=glioblastoma amplified sequence /DB_XREF=gi:4503936 /UG=Hs.152707 glioblastoma amplified sequence /FL=gb:BC000732.1 gb:BC001837.1 gb:AF029786.1 gb:NM_001483.1 </td> <td> NM_001483 </td> <td> glioblastoma amplified sequence </td> <td> GBAS </td> <td> 2631 </td> <td> NM_001202469 /// NM_001483 </td> <td> 0006119 // oxidative phosphorylation // inferred from mutant phenotype /// 0006754 // ATP biosynthetic process // inferred from mutant phenotype /// 2000984 // negative regulation of ATP citrate synthase activity // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 16.90 </td> <td> 273.90 </td> <td> 0.74 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217769_s_at </td> <td> 217769_s_at </td> <td> NM_015932 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015932.1 /DEF=Homo sapiens hypothetical protein (HSPC014), mRNA. /FEA=mRNA /GEN=HSPC014 /PROD=hypothetical protein /DB_XREF=gi:7705428 /UG=Hs.279813 hypothetical protein /FL=gb:AF275807.1 gb:BC003390.1 gb:AF077200.1 gb:AF125097.1 gb:NM_015932.1 </td> <td> NM_015932 </td> <td> proteasome maturation protein </td> <td> POMP </td> <td> 51371 </td> <td> NM_015932 </td> <td> 0043248 // proteasome assembly // inferred from mutant phenotype </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 53.97 </td> <td> 987.51 </td> <td> 0.74 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200086_s_at </td> <td> 200086_s_at </td> <td> AA854966 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA854966 /FEA=EST /DB_XREF=gi:2942504 /DB_XREF=est:aj70d12.s1 /CLONE=IMAGE:1401815 /UG=Hs.113205 cytochrome c oxidase subunit IV </td> <td> AA854966 </td> <td> cytochrome c oxidase subunit IV isoform 1 </td> <td> COX4I1 </td> <td> 1327 </td> <td> NM_001861 /// XM_005255798 </td> <td> 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0007584 // response to nutrient // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -32.00 </td> <td> 599.83 </td> <td> -0.74 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 210092_at </td> <td> 210092_at </td> <td> AF067173 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF067173.1 /DEF=Homo sapiens Mago homolog mRNA, complete cds. /FEA=mRNA /PROD=Mago homolog /DB_XREF=gi:4894379 /UG=Hs.57904 mago-nashi (Drosophila) homolog, proliferation-associated /FL=gb:AF035940.1 gb:AF067173.1 gb:NM_002370.2 </td> <td> AF067173 </td> <td> mago-nashi homolog, proliferation-associated (Drosophila) /// mago-nashi homolog B (Drosophila) </td> <td> MAGOH /// MAGOHB </td> <td> 4116 /// 55110 </td> <td> NM_002370 /// NM_018048 /// XM_005253402 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from mutant phenotype /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -18.17 </td> <td> 233.34 </td> <td> -0.74 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211749_s_at </td> <td> 211749_s_at </td> <td> BC005941 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005941.1 /DEF=Homo sapiens, Similar to vesicle-associated membrane protein 3, clone MGC:14563, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to vesicle-associated membrane protein3 /DB_XREF=gi:13543573 /FL=gb:BC005941.1 </td> <td> BC005941 </td> <td> vesicle-associated membrane protein 3 </td> <td> VAMP3 </td> <td> 9341 </td> <td> NM_004781 </td> <td> 0001921 // positive regulation of receptor recycling // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // traceable author statement /// 0006904 // vesicle docking involved in exocytosis // traceable author statement /// 0006906 // vesicle fusion // not recorded /// 0007269 // neurotransmitter secretion // not recorded /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from sequence or structural similarity /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from sequence or structural similarity /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0043001 // Golgi to plasma membrane protein transport // inferred from electronic annotation /// 0061025 // membrane fusion // traceable author statement </td> <td> 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030141 // secretory granule // inferred from electronic annotation /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031201 // SNARE complex // not recorded /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay </td> <td> 0000149 // SNARE binding // not recorded /// 0005484 // SNAP receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0017075 // syntaxin-1 binding // inferred from electronic annotation </td> <td> -41.93 </td> <td> 868.99 </td> <td> -0.74 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202138_x_at </td> <td> 202138_x_at </td> <td> NM_006303 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006303.2 /DEF=Homo sapiens JTV1 gene (JTV1), mRNA. /FEA=mRNA /GEN=JTV1 /PROD=JTV1 /DB_XREF=gi:11125769 /UG=Hs.301613 JTV1 gene /FL=gb:NM_006303.2 gb:U24169.1 gb:BC002853.1 </td> <td> NM_006303 </td> <td> aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 </td> <td> AIMP2 </td> <td> 7965 </td> <td> NM_006303 /// XM_005249847 /// XM_005249848 /// XM_005249850 /// XM_006715772 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from expression pattern /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0010999 // regulation of eIF2 alpha phosphorylation by heme // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0045993 // negative regulation of translational initiation by iron // non-traceable author statement /// 0046501 // protoporphyrinogen IX metabolic process // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0046984 // regulation of hemoglobin biosynthetic process // inferred from electronic annotation /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from electronic annotation /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from sequence or structural similarity /// 0060510 // Type II pneumocyte differentiation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity </td> <td> -24.07 </td> <td> 274.11 </td> <td> -0.74 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201318_s_at </td> <td> 201318_s_at </td> <td> NM_006471 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006471.1 /DEF=Homo sapiens myosin, light polypeptide, regulatory, non-sarcomeric (20kD) (MLCB), mRNA.  /FEA=mRNA /GEN=MLCB /PROD=myosin, light polypeptide, regulatory,non-sarcomeric (20kD) /DB_XREF=gi:5453739 /UG=Hs.233936 myosin, light polypeptide, regulatory, non-sarcomeric (20kD) /FL=gb:NM_006471.1 </td> <td> NM_006471 </td> <td> myosin, light chain 12A, regulatory, non-sarcomeric /// myosin, light chain 12B, regulatory </td> <td> MYL12A /// MYL12B </td> <td> 10627 /// 103910 </td> <td> NM_001144944 /// NM_001144945 /// NM_001144946 /// NM_006471 /// NM_033546 /// XM_005258076 /// XM_005258077 /// XM_005258078 </td> <td> 0006936 // muscle contraction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0072661 // protein targeting to plasma membrane // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0016460 // myosin II complex // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0035254 // glutamate receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -124.45 </td> <td> 2222.65 </td> <td> -0.74 </td> <td> 0.48 </td> <td> 0.56 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201199_s_at </td> <td> 201199_s_at </td> <td> NM_002807 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002807.1 /DEF=Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 (PSMD1), mRNA.  /FEA=mRNA /GEN=PSMD1 /PROD=proteasome (prosome, macropain) 26S subunit,non-ATPase, 1 /DB_XREF=gi:4506224 /UG=Hs.3887 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 /FL=gb:D44466.1 gb:NM_002807.1 </td> <td> NM_002807 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 </td> <td> PSMD1 </td> <td> 5707 </td> <td> NM_001191037 /// NM_002807 /// NR_034059 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005838 // proteasome regulatory particle // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation </td> <td> 45.70 </td> <td> 580.00 </td> <td> 0.74 </td> <td> 0.48 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211992_at </td> <td> 211992_at </td> <td> AI445745 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI445745 /FEA=EST /DB_XREF=gi:4290360 /DB_XREF=est:tj09e04.x1 /CLONE=IMAGE:2141022 /UG=Hs.184592 protein kinase, lysine deficient 1 /FL=gb:NM_018979.1 </td> <td> AI445745 </td> <td> WNK lysine deficient protein kinase 1 </td> <td> WNK1 </td> <td> 65125 </td> <td> NM_001184985 /// NM_014823 /// NM_018979 /// NM_213655 /// XM_005253734 /// XM_005253735 /// XM_005253736 /// XM_005253737 /// XM_005253738 /// XM_005253739 /// XM_005253740 /// XM_005253741 /// XM_005253743 /// XM_006718998 /// XM_006718999 /// XM_006719000 /// XM_006719001 /// XM_006719002 /// XM_006719003 /// XM_006719004 </td> <td> 0003084 // positive regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006811 // ion transport // inferred from sequence or structural similarity /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // traceable author statement /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0035556 // intracellular signal transduction // traceable author statement /// 0048666 // neuron development // non-traceable author statement /// 0050794 // regulation of cellular process // inferred from sequence or structural similarity /// 0090188 // negative regulation of pancreatic juice secretion // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019869 // chloride channel inhibitor activity // inferred from direct assay /// 0019902 // phosphatase binding // inferred from direct assay </td> <td> -10.58 </td> <td> 123.01 </td> <td> -0.74 </td> <td> 0.48 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218131_s_at </td> <td> 218131_s_at </td> <td> NM_017660 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017660.1 /DEF=Homo sapiens hypothetical protein FLJ20085 (FLJ20085), mRNA. /FEA=mRNA /GEN=FLJ20085 /PROD=hypothetical protein FLJ20085 /DB_XREF=gi:8923093 /UG=Hs.118964 hypothetical protein FLJ20085 /FL=gb:NM_017660.1 </td> <td> NM_017660 </td> <td> GATA zinc finger domain containing 2A </td> <td> GATAD2A </td> <td> 54815 </td> <td> NM_017660 /// XM_005259954 /// XM_005259956 /// XM_005259957 /// XM_005259958 /// XM_005259959 /// XM_005259960 /// XM_005259961 /// XM_005259962 /// XM_006722780 /// XM_006722781 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001842 // neural fold formation // inferred from electronic annotation /// 0006306 // DNA methylation // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0010172 // embryonic body morphogenesis // inferred from electronic annotation /// 0012501 // programmed cell death // inferred from electronic annotation /// 0021506 // anterior neuropore closure // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016581 // NuRD complex // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 23.62 </td> <td> 220.64 </td> <td> 0.74 </td> <td> 0.48 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216348_at </td> <td> 216348_at </td> <td> AL049693 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049693 /DEF=Human DNA sequence from clone RP4-753D5 on chromosome 6p12.1-12.3. Contains the 3 end of the TFAP2B gene for transcription factor AP-2 beta (activating enhancer-binding protein 2 beta), the gene for a novel protein similar to RPS17 (40S ribosomal... /FEA=mRNA_1 /DB_XREF=gi:7378744 /UG=Hs.283833 Human DNA sequence from clone RP4-753D5 on chromosome 6p12.1-12.3. Contains the 3 end of the TFAP2B gene for transcription factor AP-2 beta (activating enhancer-binding protein 2 beta), the gene for a novel protein similar to RPS17 (40S ribosomal protein </td> <td> AL049693 </td> <td> ribosomal protein S17 pseudogene 5 /// </td> <td> RPS17P5 /// RPS17P5 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -47.50 </td> <td> 238.80 </td> <td> -0.74 </td> <td> 0.48 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201554_x_at </td> <td> 201554_x_at </td> <td> NM_004130 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004130.1 /DEF=Homo sapiens glycogenin (GYG), mRNA. /FEA=mRNA /GEN=GYG /PROD=glycogenin /DB_XREF=gi:4758491 /UG=Hs.174071 glycogenin /FL=gb:U44131.1 gb:BC000033.1 gb:NM_004130.1 gb:U31525.1 </td> <td> NM_004130 </td> <td> glycogenin 1 </td> <td> GYG1 </td> <td> 2992 </td> <td> NM_001184720 /// NM_001184721 /// NM_004130 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005536 // glucose binding // inferred from electronic annotation /// 0008466 // glycogenin glucosyltransferase activity // not recorded /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 15.40 </td> <td> 269.25 </td> <td> 0.74 </td> <td> 0.48 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200723_s_at </td> <td> 200723_s_at </td> <td> NM_005898 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005898.1 /DEF=Homo sapiens membrane component, chromosome 11, surface marker 1 (M11S1), mRNA.  /FEA=mRNA /GEN=M11S1 /PROD=membrane component, chromosome 11, surfacemarker 1 /DB_XREF=gi:5174502 /UG=Hs.278672 membrane component, chromosome 11, surface marker 1 /FL=gb:BC001731.1 gb:NM_005898.1 </td> <td> NM_005898 </td> <td> cell cycle associated protein 1 </td> <td> CAPRIN1 </td> <td> 4076 </td> <td> NM_005898 /// NM_203364 </td> <td> 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 46.52 </td> <td> 1052.31 </td> <td> 0.74 </td> <td> 0.48 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211069_s_at </td> <td> 211069_s_at </td> <td> BC006462 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006462.1 /DEF=Homo sapiens, ubiquitin-like 1 (sentrin), clone MGC:2095, mRNA, complete cds.  /FEA=mRNA /PROD=ubiquitin-like 1 (sentrin) /DB_XREF=gi:13623670 /FL=gb:BC006462.1 </td> <td> BC006462 </td> <td> small ubiquitin-like modifier 1 </td> <td> SUMO1 </td> <td> 7341 </td> <td> NM_001005781 /// NM_001005782 /// NM_003352 </td> <td> 0006281 // DNA repair // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030578 // PML body organization // inferred from electronic annotation /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0032880 // regulation of protein localization // traceable author statement /// 0043392 // negative regulation of DNA binding // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement /// 0090204 // protein localization to nuclear pore // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 17.23 </td> <td> 499.04 </td> <td> 0.74 </td> <td> 0.48 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202933_s_at </td> <td> 202933_s_at </td> <td> NM_005433 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005433.1 /DEF=Homo sapiens v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 (YES1), mRNA.  /FEA=mRNA /GEN=YES1 /PROD=v-yes-1 Yamaguchi sarcoma viral oncogene homolog1 /DB_XREF=gi:4885660 /UG=Hs.194148 v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 /FL=gb:NM_005433.1 </td> <td> NM_005433 </td> <td> YES proto-oncogene 1, Src family tyrosine kinase </td> <td> YES1 </td> <td> 7525 </td> <td> NM_005433 /// XM_005258139 </td> <td> 0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // not recorded /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043114 // regulation of vascular permeability // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // traceable author statement /// 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0044325 // ion channel binding // inferred from physical interaction </td> <td> 23.40 </td> <td> 296.75 </td> <td> 0.74 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 222235_s_at </td> <td> 222235_s_at </td> <td> AL139812 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL139812 /DEF=Human DNA sequence from clone RP1-19N1 on chromosome Xq21.33-22.3 Contains a gene for a novel protein. Contains ESTs, STSs and GSSs /FEA=mRNA /DB_XREF=gi:9187185 /UG=Hs.287761 Human DNA sequence from clone RP1-19N1 on chromosome Xq21.33-22.3 Contains a gene for a novel protein. Contains ESTs, STSs and GSSs </td> <td> AL139812 </td> <td> chondroitin sulfate N-acetylgalactosaminyltransferase 2 </td> <td> CSGALNACT2 </td> <td> 55454 </td> <td> NM_018590 /// XM_005271819 /// XM_005271820 /// XM_005271821 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0030166 // proteoglycan biosynthetic process // inferred from direct assay /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050650 // chondroitin sulfate proteoglycan biosynthetic process // inferred from direct assay /// 0050651 // dermatan sulfate proteoglycan biosynthetic process // inferred from direct assay /// 0050652 // dermatan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process // traceable author statement /// 0050653 // chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030173 // integral component of Golgi membrane // non-traceable author statement /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation </td> <td> 0008376 // acetylgalactosaminyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047237 // glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity // inferred from electronic annotation </td> <td> 13.80 </td> <td> 121.65 </td> <td> 0.73 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202560_s_at </td> <td> 202560_s_at </td> <td> NM_015607 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015607.1 /DEF=Homo sapiens DKFZP547E1010 protein (DKFZP547E1010), mRNA. /FEA=mRNA /GEN=DKFZP547E1010 /PROD=DKFZP547E1010 protein /DB_XREF=gi:7661589 /UG=Hs.323817 DKFZP547E1010 protein /FL=gb:NM_015607.1 </td> <td> NM_015607 </td> <td> chromatin target of PRMT1 </td> <td> CHTOP </td> <td> 26097 </td> <td> NM_001206612 /// NM_001244664 /// NM_015607 /// XM_005245085 /// XM_005245086 /// XM_006711269 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051096 // positive regulation of helicase activity // inferred from direct assay </td> <td> 0000346 // transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 11.15 </td> <td> 231.10 </td> <td> 0.73 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209121_x_at </td> <td> 209121_x_at </td> <td> M64497 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M64497.1 /DEF=Human apolipoprotein AI regulatory protein (ARP-1) mRNA, complete cds.  /FEA=mRNA /GEN=ARP-1 /PROD=apolipoprotein AI regulatory protein-1 /DB_XREF=gi:179023 /UG=Hs.288869 nuclear receptor subfamily 2, group F, member 2 /FL=gb:M64497.1 </td> <td> M64497 </td> <td> nuclear receptor subfamily 2, group F, member 2 </td> <td> NR2F2 </td> <td> 7026 </td> <td> NM_001145155 /// NM_001145156 /// NM_001145157 /// NM_021005 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001893 // maternal placenta development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009956 // radial pattern formation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010596 // negative regulation of endothelial cell migration // inferred from mutant phenotype /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0021796 // cerebral cortex regionalization // inferred from electronic annotation /// 0030522 // intracellular receptor signaling pathway // inferred from direct assay /// 0030522 // intracellular receptor signaling pathway // inferred from electronic annotation /// 0030522 // intracellular receptor signaling pathway // traceable author statement /// 0030900 // forebrain development // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0060707 // trophoblast giant cell differentiation // inferred from electronic annotation /// 0060849 // regulation of transcription involved in lymphatic endothelial cell fate commitment // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0001972 // retinoic acid binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044323 // retinoic acid-responsive element binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -47.67 </td> <td> 634.59 </td> <td> -0.73 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 212590_at </td> <td> 212590_at </td> <td> AI431643 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI431643 /FEA=EST /DB_XREF=gi:4304619 /DB_XREF=est:tg74f12.x1 /CLONE=IMAGE:2114543 /UG=Hs.206097 oncogene TC21 </td> <td> AI431643 </td> <td> related RAS viral (r-ras) oncogene homolog 2 </td> <td> RRAS2 </td> <td> 22800 </td> <td> NM_001102669 /// NM_001177314 /// NM_001177315 /// NM_012250 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> -24.33 </td> <td> 364.36 </td> <td> -0.73 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 214880_x_at </td> <td> 214880_x_at </td> <td> D90453 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D90453.1 /DEF=Human mRNA for l-caldesmon II. /FEA=mRNA /DB_XREF=gi:219897 /UG=Hs.325474 caldesmon 1 </td> <td> D90453 </td> <td> caldesmon 1 </td> <td> CALD1 </td> <td> 800 </td> <td> NM_004342 /// NM_033138 /// NM_033139 /// NM_033140 /// NM_033157 /// XM_006716136 /// XM_006716137 /// XM_006716138 /// XM_006716139 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030478 // actin cap // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation </td> <td> -18.15 </td> <td> 69.92 </td> <td> -0.73 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203387_s_at </td> <td> 203387_s_at </td> <td> NM_014832 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014832.1 /DEF=Homo sapiens KIAA0603 gene product (KIAA0603), mRNA. /FEA=mRNA /GEN=KIAA0603 /PROD=KIAA0603 gene product /DB_XREF=gi:7662197 /UG=Hs.173802 KIAA0603 gene product /FL=gb:AB011175.1 gb:NM_014832.1 </td> <td> NM_014832 </td> <td> TBC1 domain family, member 4 </td> <td> TBC1D4 </td> <td> 9882 </td> <td> NM_001286658 /// NM_001286659 /// NM_014832 /// XM_005266603 /// XM_005266605 /// XM_006719902 /// XM_006719903 </td> <td> 0016192 // vesicle-mediated transport // inferred from mutant phenotype /// 0031339 // negative regulation of vesicle fusion // inferred from electronic annotation /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 13.45 </td> <td> 271.70 </td> <td> 0.73 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211708_s_at </td> <td> 211708_s_at </td> <td> BC005807 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005807.1 /DEF=Homo sapiens, clone MGC:10264, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:10264) /DB_XREF=gi:13543283 /FL=gb:BC005807.1 </td> <td> BC005807 </td> <td> stearoyl-CoA desaturase (delta-9-desaturase) </td> <td> SCD </td> <td> 6319 </td> <td> NM_005063 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004768 // stearoyl-CoA 9-desaturase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016717 // oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water // inferred from electronic annotation </td> <td> -18.95 </td> <td> 69.38 </td> <td> -0.73 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202372_at </td> <td> 202372_at </td> <td> BF240652 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF240652 /FEA=EST /DB_XREF=gi:11154576 /DB_XREF=est:601875908F1 /CLONE=IMAGE:4099824 /UG=Hs.197289 rab3 GTPase-activating protein, non-catalytic subunit (150kD) /FL=gb:AF255648.1 gb:AF004828.1 gb:NM_012414.1 </td> <td> BF240652 </td> <td> aurora kinase A pseudogene 1 /// RAB3 GTPase activating protein subunit 2 (non-catalytic) </td> <td> AURKAPS1 /// RAB3GAP2 </td> <td> 6791 /// 25782 </td> <td> NM_012414 /// NR_001587 </td> <td> 0006886 // intracellular protein transport // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0043087 // regulation of GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0030234 // enzyme regulator activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity </td> <td> 21.65 </td> <td> 145.25 </td> <td> 0.73 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218461_at </td> <td> 218461_at </td> <td> NM_016301 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016301.1 /DEF=Homo sapiens protein x 0004 (LOC51184), mRNA. /FEA=mRNA /GEN=LOC51184 /PROD=protein x 0004 /DB_XREF=gi:9994188 /UG=Hs.284164 protein x 0004 /FL=gb:AF117229.1 gb:NM_016301.1 </td> <td> NM_016301 </td> <td> GPN-loop GTPase 3 </td> <td> GPN3 </td> <td> 51184 </td> <td> NM_001164372 /// NM_001164373 /// NM_016301 /// XM_005253896 </td> <td>  </td> <td> 0043234 // protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 9.78 </td> <td> 82.49 </td> <td> 0.73 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211675_s_at </td> <td> 211675_s_at </td> <td> AF054589 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF054589.1 /DEF=Homo sapiens HIC protein isoform p40 and HIC protein isoform p32 mRNAs, complete cds.  /FEA=mRNA /PROD=HIC protein isoform p32; HIC protein isoform p40 /DB_XREF=gi:3426297 /FL=gb:AF054589.1 </td> <td> AF054589 </td> <td> MyoD family inhibitor domain containing </td> <td> MDFIC </td> <td> 29969 </td> <td> NM_001166345 /// NM_001166346 /// NM_199072 </td> <td> 0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030111 // regulation of Wnt signaling pathway // inferred from direct assay /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042308 // negative regulation of protein import into nucleus // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0050434 // positive regulation of viral transcription // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0072588 // box H/ACA RNP complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0030332 // cyclin binding // inferred from physical interaction /// 0030515 // snoRNA binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from direct assay </td> <td> 14.02 </td> <td> 101.54 </td> <td> 0.73 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209219_at </td> <td> 209219_at </td> <td> L03411 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L03411.1 /DEF=Human RD protein (RD) mRNA, complete cds. /FEA=mRNA /GEN=RD /PROD=RD protein /DB_XREF=gi:190973 /UG=Hs.106061 RD RNA-binding protein /FL=gb:L03411.1 gb:NM_002904.1 </td> <td> L03411 </td> <td> microRNA 1236 /// negative elongation factor complex member E </td> <td> MIR1236 /// NELFE </td> <td> 7936 /// 100302242 </td> <td> NM_002904 /// NR_031601 /// XM_006715205 /// XM_006725521 /// XM_006725739 /// XM_006725936 /// XM_006726037 /// XM_006726125 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0034244 // negative regulation of transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0032021 // NELF complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 12.30 </td> <td> 105.60 </td> <td> 0.73 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217804_s_at </td> <td> 217804_s_at </td> <td> BC003086 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003086.1 /DEF=Homo sapiens, hypothetical protein FLJ20011, clone MGC:1080, mRNA, complete cds.  /FEA=mRNA /PROD=hypothetical protein FLJ20011 /DB_XREF=gi:13111838 /UG=Hs.256583 interleukin enhancer binding factor 3, 90kD /FL=gb:BC003086.1 gb:NM_004516.1 gb:U10324.1 gb:AF167570.1 gb:NM_012218.1 </td> <td> BC003086 </td> <td> interleukin enhancer binding factor 3, 90kDa </td> <td> ILF3 </td> <td> 3609 </td> <td> NM_001137673 /// NM_004516 /// NM_012218 /// NM_017620 /// NM_153464 /// XM_005259895 /// XM_006722742 </td> <td> 0000279 // M phase // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0045071 // negative regulation of viral genome replication // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003723 // RNA binding // non-traceable author statement /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 19.25 </td> <td> 211.45 </td> <td> 0.73 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200078_s_at </td> <td> 200078_s_at </td> <td> BC005876 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005876.1 /DEF=Homo sapiens, ATPase, H+ transporting, lysosomal (vacuolar proton pump) 21kD, clone MGC:4498, mRNA, complete cds.  /FEA=mRNA /PROD=ATPase, H+ transporting, lysosomal (vacuolarproton pump) 21kD /DB_XREF=gi:13543437 /FL=gb:BC005876.1 </td> <td> BC005876 </td> <td> ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b </td> <td> ATP6V0B </td> <td> 533 </td> <td> NM_001039457 /// NM_001294333 /// NM_004047 /// XM_005270944 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0033572 // transferrin transport // traceable author statement /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005774 // vacuolar membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation </td> <td> 0005215 // transporter activity // traceable author statement /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation </td> <td> 19.02 </td> <td> 311.11 </td> <td> 0.72 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211600_at </td> <td> 211600_at </td> <td> U20489 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U20489.1 /DEF=Human glomerular epithelial protein 1 (GLEPP1) mRNA, complete cds. /FEA=mRNA /GEN=GLEPP1 /PROD=glomerular epithelial protein 1 /DB_XREF=gi:885925 /FL=gb:U20489.1 </td> <td> U20489 </td> <td> protein tyrosine phosphatase, receptor type, O </td> <td> PTPRO </td> <td> 5800 </td> <td> NM_002848 /// NM_030667 /// NM_030668 /// NM_030669 /// NM_030670 /// NM_030671 </td> <td> 0000902 // cell morphogenesis // inferred from sequence or structural similarity /// 0002548 // monocyte chemotaxis // inferred from mutant phenotype /// 0003093 // regulation of glomerular filtration // inferred from sequence or structural similarity /// 0003105 // negative regulation of glomerular filtration // inferred from sequence or structural similarity /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // traceable author statement /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0010812 // negative regulation of cell-substrate adhesion // inferred from sequence or structural similarity /// 0010977 // negative regulation of neuron projection development // inferred from sequence or structural similarity /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0030032 // lamellipodium assembly // inferred from sequence or structural similarity /// 0032835 // glomerulus development // inferred from mutant phenotype /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from mutant phenotype /// 0036060 // slit diaphragm assembly // inferred from sequence or structural similarity /// 0036060 // slit diaphragm assembly // non-traceable author statement /// 0042773 // ATP synthesis coupled electron transport // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0072112 // glomerular visceral epithelial cell differentiation // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from sequence or structural similarity /// 0090260 // negative regulation of retinal ganglion cell axon guidance // inferred from sequence or structural similarity </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0016328 // lateral plasma membrane // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030424 // axon // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from mutant phenotype /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from sequence or structural similarity /// 0017147 // Wnt-protein binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity </td> <td> -155.30 </td> <td> 711.80 </td> <td> -0.72 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200983_x_at </td> <td> 200983_x_at </td> <td> BF983379 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF983379 /FEA=EST /DB_XREF=gi:12386191 /DB_XREF=est:602305270F1 /CLONE=IMAGE:4396576 /UG=Hs.119663 CD59 antigen p18-20 (antigen identified by monoclonal antibodies 16.3A5, EJ16, EJ30, EL32 and G344) /FL=gb:NM_000611.1 gb:M34671.1 </td> <td> BF983379 </td> <td> CD59 molecule, complement regulatory protein </td> <td> CD59 </td> <td> 966 </td> <td> NM_000611 /// NM_001127223 /// NM_001127225 /// NM_001127226 /// NM_001127227 /// NM_203329 /// NM_203330 /// NM_203331 </td> <td> 0001775 // cell activation // not recorded /// 0001971 // negative regulation of activation of membrane attack complex // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030449 // regulation of complement activation // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement </td> <td> 0005576 // extracellular region // not recorded /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0031225 // anchored component of membrane // inferred from electronic annotation /// 0031362 // anchored component of external side of plasma membrane // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043218 // compact myelin // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001848 // complement binding // not recorded /// 0005515 // protein binding // inferred from physical interaction </td> <td> 55.65 </td> <td> 2331.80 </td> <td> 0.72 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 204246_s_at </td> <td> 204246_s_at </td> <td> NM_007234 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007234.2 /DEF=Homo sapiens dynactin 3 (p22) (DCTN3), transcript variant 1, mRNA. /FEA=mRNA /GEN=DCTN3 /PROD=dynactin 3, isoform 1 /DB_XREF=gi:13259516 /UG=Hs.15961 dynactin 3 (p22) /FL=gb:NM_007234.2 gb:AF082513.1 </td> <td> NM_007234 </td> <td> dynactin 3 (p22) </td> <td> DCTN3 </td> <td> 11258 </td> <td> NM_001281425 /// NM_001281426 /// NM_001281427 /// NM_007234 /// NM_024348 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000910 // cytokinesis // inferred from direct assay /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005869 // dynactin complex // inferred from physical interaction /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 21.15 </td> <td> 341.35 </td> <td> 0.72 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 212025_s_at </td> <td> 212025_s_at </td> <td> BG421186 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG421186 /FEA=EST /DB_XREF=gi:13327692 /DB_XREF=est:602451665F1 /CLONE=IMAGE:4589873 /UG=Hs.83849 flightless I (Drosophila) homolog </td> <td> BG421186 </td> <td> flightless I homolog (Drosophila) </td> <td> FLII </td> <td> 2314 </td> <td> NM_001256264 /// NM_001256265 /// NM_002018 /// XM_005256555 /// XM_005256556 /// XM_005256558 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -14.75 </td> <td> 143.55 </td> <td> -0.72 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 210298_x_at </td> <td> 210298_x_at </td> <td> AF098518 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF098518.1 /DEF=Homo sapiens four and a half LIM domains 1 protein isoform B (FHL1) mRNA, complete cds.  /FEA=mRNA /GEN=FHL1 /PROD=four and a half LIM domains 1 protein isoform B /DB_XREF=gi:3851649 /UG=Hs.239069 four and a half LIM domains 1 /FL=gb:AF098518.1 gb:AF063002.1 </td> <td> AF098518 </td> <td> four and a half LIM domains 1 </td> <td> FHL1 </td> <td> 2273 </td> <td> NM_001159699 /// NM_001159700 /// NM_001159701 /// NM_001159702 /// NM_001159703 /// NM_001159704 /// NM_001167819 /// NM_001449 /// NR_027621 /// XM_006724743 /// XM_006724744 /// XM_006724745 /// XM_006724746 /// XM_006724747 </td> <td> 0003254 // regulation of membrane depolarization // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0009887 // organ morphogenesis // non-traceable author statement /// 0010972 // negative regulation of G2/M transition of mitotic cell cycle // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0043268 // positive regulation of potassium ion transport // inferred from direct assay /// 1901016 // regulation of potassium ion transmembrane transporter activity // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -15.12 </td> <td> 95.74 </td> <td> -0.72 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203082_at </td> <td> 203082_at </td> <td> NM_014753 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014753.1 /DEF=Homo sapiens KIAA0187 gene product (KIAA0187), mRNA. /FEA=mRNA /GEN=KIAA0187 /PROD=KIAA0187 gene product /DB_XREF=gi:7661979 /UG=Hs.10848 KIAA0187 gene product /FL=gb:D80009.1 gb:NM_014753.1 </td> <td> NM_014753 </td> <td> BMS1 ribosome biogenesis factor </td> <td> BMS1 </td> <td> 9790 </td> <td> NM_014753 /// XM_005271846 /// XM_005271847 /// XM_005271848 /// XM_005271849 /// XM_006718081 /// XR_246522 /// XR_428728 </td> <td> 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 27.05 </td> <td> 311.82 </td> <td> 0.72 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 212159_x_at </td> <td> 212159_x_at </td> <td> AI125280 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI125280 /FEA=EST /DB_XREF=gi:3593794 /DB_XREF=est:qd92c05.x1 /CLONE=IMAGE:1736936 /UG=Hs.19121 adaptor-related protein complex 2, alpha 2 subunit </td> <td> AI125280 </td> <td> adaptor-related protein complex 2, alpha 2 subunit </td> <td> AP2A2 </td> <td> 161 </td> <td> NM_001242837 /// NM_012305 /// XM_006718159 /// XM_006718160 /// XR_242779 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050690 // regulation of defense response to virus by virus // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // non-traceable author statement /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity </td> <td> 23.73 </td> <td> 347.99 </td> <td> 0.72 </td> <td> 0.49 </td> <td> 0.57 </td> <td> -4.61 </td> </tr>
  <tr> <td> 206567_s_at </td> <td> 206567_s_at </td> <td> NM_016436 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016436.1 /DEF=Homo sapiens hepatocellular carcinoma-associated antigen 58 (LOC51230), mRNA.  /FEA=mRNA /GEN=LOC51230 /PROD=hepatocellular carcinoma-associated antigen 58 /DB_XREF=gi:7705990 /UG=Hs.301055 hepatocellular carcinoma-associated antigen 58 /FL=gb:AF220416.1 gb:NM_016436.1 </td> <td> NM_016436 </td> <td> PHD finger protein 20 </td> <td> PHF20 </td> <td> 51230 </td> <td> NM_016436 /// XM_005260421 </td> <td> 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay </td> <td> 0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043995 // histone acetyltransferase activity (H4-K5 specific) // inferred from direct assay /// 0043996 // histone acetyltransferase activity (H4-K8 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046972 // histone acetyltransferase activity (H4-K16 specific) // inferred from direct assay </td> <td> -11.37 </td> <td> 104.99 </td> <td> -0.72 </td> <td> 0.50 </td> <td> 0.58 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218021_at </td> <td> 218021_at </td> <td> NM_021004 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021004.1 /DEF=Homo sapiens peroxisomal short-chain alcohol dehydrogenase (SCAD-SRL), mRNA.  /FEA=mRNA /GEN=SCAD-SRL /PROD=peroxisomal short-chain alcohol dehydrogenase /DB_XREF=gi:10337604 /UG=Hs.6318 peroxisomal short-chain alcohol dehydrogenase /FL=gb:NM_021004.1 gb:AB045131.1 gb:BC003019.1 gb:AF044127.1 </td> <td> NM_021004 </td> <td> dehydrogenase/reductase (SDR family) member 4 /// dehydrogenase/reductase (SDR family) member 4 like 2 </td> <td> DHRS4 /// DHRS4L2 </td> <td> 10901 /// 317749 </td> <td> NM_001193635 /// NM_001193636 /// NM_001193637 /// NM_001282987 /// NM_001282988 /// NM_001282989 /// NM_001282990 /// NM_001282991 /// NM_021004 /// NM_198083 /// XM_006720005 /// XM_006720006 </td> <td> 0006066 // alcohol metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from direct assay /// 0042180 // cellular ketone metabolic process // inferred from direct assay /// 0051262 // protein tetramerization // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000253 // 3-keto sterol reductase activity // inferred from direct assay /// 0004090 // carbonyl reductase (NADPH) activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016655 // oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor // inferred from direct assay /// 0018455 // alcohol dehydrogenase [NAD(P)+] activity // inferred from direct assay </td> <td> -13.42 </td> <td> 98.71 </td> <td> -0.71 </td> <td> 0.50 </td> <td> 0.58 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208113_x_at </td> <td> 208113_x_at </td> <td> NM_030979 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030979.1 /DEF=Homo sapiens testis-specific poly(A)-binding protein (PABP) (LOC81874), mRNA.  /FEA=mRNA /GEN=LOC81874 /PROD=testis-specific poly(A)-binding protein (PABP) /DB_XREF=gi:13569957 /FL=gb:NM_030979.1 </td> <td> NM_030979 </td> <td> poly(A) binding protein, cytoplasmic 3 </td> <td> PABPC3 </td> <td> 5042 </td> <td> NM_030979 </td> <td> 0016071 // mRNA metabolic process // non-traceable author statement </td> <td> 0005737 // cytoplasm // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0008143 // poly(A) binding // inferred from direct assay </td> <td> 81.28 </td> <td> 932.16 </td> <td> 0.71 </td> <td> 0.50 </td> <td> 0.58 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200085_s_at </td> <td> 200085_s_at </td> <td> NM_007108 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_007108.1 /DEF=Homo sapiens transcription elongation factor B (SIII), polypeptide 2 (18kD, elongin B) (TCEB2), mRNA.  /FEA=CDS /GEN=TCEB2 /PROD=elongin B /DB_XREF=gi:6005889 /UG=Hs.172772 transcription elongation factor B (SIII), polypeptide 2 (18kD, elongin B) /FL=gb:NM_007108.1 gb:L42856.1 </td> <td> NM_007108 </td> <td> transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) </td> <td> TCEB2 </td> <td> 6923 </td> <td> NM_007108 /// NM_207013 /// XM_006720937 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0071456 // cellular response to hypoxia // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0031462 // Cul2-RING ubiquitin ligase complex // inferred from direct assay /// 0031466 // Cul5-RING ubiquitin ligase complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070449 // elongin complex // inferred from electronic annotation </td> <td> 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay </td> <td> -20.77 </td> <td> 465.69 </td> <td> -0.71 </td> <td> 0.50 </td> <td> 0.58 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201600_at </td> <td> 201600_at </td> <td> NM_007273 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007273.1 /DEF=Homo sapiens B-cell associated protein (REA), mRNA. /FEA=mRNA /GEN=REA /PROD=B-cell associated protein /DB_XREF=gi:6005853 /UG=Hs.7771 B-cell associated protein /FL=gb:AF150962.1 gb:NM_007273.1 gb:AF126021.1 gb:AF178980.1 </td> <td> NM_007273 </td> <td> prohibitin 2 </td> <td> PHB2 </td> <td> 11331 </td> <td> NM_001144831 /// NM_001267700 /// XR_242980 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0033600 // negative regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0060744 // mammary gland branching involved in thelarche // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // non-traceable author statement </td> <td> -92.60 </td> <td> 1321.45 </td> <td> -0.71 </td> <td> 0.50 </td> <td> 0.58 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200746_s_at </td> <td> 200746_s_at </td> <td> NM_002074 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002074.1 /DEF=Homo sapiens guanine nucleotide binding protein (G protein), beta polypeptide 1 (GNB1), mRNA.  /FEA=mRNA /GEN=GNB1 /PROD=guanine nucleotide binding protein (G protein),beta polypeptide 1 /DB_XREF=gi:11321584 /UG=Hs.215595 guanine nucleotide binding protein (G protein), beta polypeptide 1 /FL=gb:NM_002074.1 gb:BC004186.1 </td> <td> NM_002074 </td> <td> guanine nucleotide binding protein (G protein), beta polypeptide 1 </td> <td> GNB1 </td> <td> 2782 </td> <td> NM_001282538 /// NM_001282539 /// NM_002074 </td> <td> 0006112 // energy reserve metabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050909 // sensory perception of taste // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity </td> <td> 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005834 // heterotrimeric G-protein complex // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0042622 // photoreceptor outer segment membrane // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097381 // photoreceptor disc membrane // traceable author statement </td> <td> 0003924 // GTPase activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from direct assay /// 0051020 // GTPase binding // inferred from physical interaction </td> <td> -53.05 </td> <td> 1031.65 </td> <td> -0.70 </td> <td> 0.50 </td> <td> 0.58 </td> <td> -4.61 </td> </tr>
  <tr> <td> 215482_s_at </td> <td> 215482_s_at </td> <td> AJ011307 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AJ011307 /DEF=Homo sapiens eIF2B delta subunit gene, exons 1-11 /FEA=CDS_2 /DB_XREF=gi:6012056 /UG=Hs.169474 DKFZP586J0119 protein </td> <td> AJ011307 </td> <td> eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa </td> <td> EIF2B4 </td> <td> 8890 </td> <td> NM_001034116 /// NM_015636 /// NM_172195 /// XM_005264632 /// XM_006712132 </td> <td> 0001541 // ovarian follicle development // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // non-traceable author statement /// 0006446 // regulation of translational initiation // not recorded /// 0009408 // response to heat // inferred from sequence or structural similarity /// 0009408 // response to heat // traceable author statement /// 0009749 // response to glucose // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0014003 // oligodendrocyte development // inferred from mutant phenotype /// 0019509 // L-methionine salvage from methylthioadenosine // not recorded /// 0032057 // negative regulation of translational initiation in response to stress // inferred from sequence or structural similarity /// 0042552 // myelination // inferred from mutant phenotype /// 0043087 // regulation of GTPase activity // inferred from direct assay /// 0043087 // regulation of GTPase activity // inferred from mutant phenotype /// 0043434 // response to peptide hormone // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045947 // negative regulation of translational initiation // not recorded /// 0051716 // cellular response to stimulus // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005851 // eukaryotic translation initiation factor 2B complex // inferred from direct assay </td> <td> 0003743 // translation initiation factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0031369 // translation initiation factor binding // inferred from sequence or structural similarity /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // not recorded </td> <td> 14.22 </td> <td> 153.59 </td> <td> 0.70 </td> <td> 0.50 </td> <td> 0.58 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218398_at </td> <td> 218398_at </td> <td> NM_016640 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016640.1 /DEF=Homo sapiens programmed cell death 9 (PDCD9), mRNA. /FEA=mRNA /GEN=PDCD9 /PROD=(HSA)PAP protein /DB_XREF=gi:7706187 /UG=Hs.28555 programmed cell death 9 /FL=gb:AL136706.1 gb:BC002460.1 gb:AF146192.2 gb:AF217523.1 gb:NM_016640.1 </td> <td> NM_016640 </td> <td> mitochondrial ribosomal protein S30 </td> <td> MRPS30 </td> <td> 10884 </td> <td> NM_016640 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -22.52 </td> <td> 166.71 </td> <td> -0.70 </td> <td> 0.50 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200060_s_at </td> <td> 200060_s_at </td> <td> BC001659 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001659.1 /DEF=Homo sapiens, RNA-binding protein S1, serine-rich domain, clone MGC:1125, mRNA, complete cds.  /FEA=mRNA /PROD=RNA-binding protein S1, serine-rich domain /DB_XREF=gi:12804496 /UG=Hs.75104 RNA-binding protein S1, serine-rich domain /FL=gb:BC001659.1 gb:BC001838.1 </td> <td> BC001659 </td> <td> RNA binding protein S1, serine-rich domain </td> <td> RNPS1 </td> <td> 10921 </td> <td> NM_001286625 /// NM_001286626 /// NM_001286627 /// NM_006711 /// NM_080594 /// NR_104485 /// XM_005255048 /// XM_005255049 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from mutant phenotype /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // traceable author statement /// 0061574 // ASAP complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003729 // mRNA binding // non-traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 42.80 </td> <td> 696.90 </td> <td> 0.70 </td> <td> 0.50 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200950_at </td> <td> 200950_at </td> <td> NM_006409 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006409.1 /DEF=Homo sapiens actin related protein 23 complex, subunit 1A (41 kD) (ARPC1A), mRNA.  /FEA=mRNA /GEN=ARPC1A /PROD=actin related protein 23 complex, subunit 1A(41 kD) /DB_XREF=gi:5454077 /UG=Hs.90370 actin related protein 23 complex, subunit 1A (41 kD) /FL=gb:NM_006409.1 </td> <td> NM_006409 </td> <td> actin related protein 2/3 complex, subunit 1A, 41kDa </td> <td> ARPC1A </td> <td> 10552 </td> <td> NM_001190996 /// NM_006409 </td> <td> 0030036 // actin cytoskeleton organization // traceable author statement /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 43.65 </td> <td> 604.85 </td> <td> 0.70 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201162_at </td> <td> 201162_at </td> <td> NM_001553 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001553.1 /DEF=Homo sapiens insulin-like growth factor binding protein 7 (IGFBP7), mRNA.  /FEA=mRNA /GEN=IGFBP7 /PROD=insulin-like growth factor binding protein 7 /DB_XREF=gi:4504618 /UG=Hs.119206 insulin-like growth factor binding protein 7 /FL=gb:L19182.1 gb:NM_001553.1 </td> <td> NM_001553 </td> <td> insulin-like growth factor binding protein 7 </td> <td> IGFBP7 </td> <td> 3490 </td> <td> NM_001253835 /// NM_001553 </td> <td> 0001558 // regulation of cell growth // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from direct assay /// 0007566 // embryo implantation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050810 // regulation of steroid biosynthetic process // inferred from electronic annotation /// 0051414 // response to cortisol // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation </td> <td> -74.33 </td> <td> 1708.69 </td> <td> -0.70 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201482_at </td> <td> 201482_at </td> <td> NM_002826 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002826.2 /DEF=Homo sapiens quiescin Q6 (QSCN6), mRNA. /FEA=mRNA /GEN=QSCN6 /PROD=quiescin Q6 /DB_XREF=gi:13325074 /UG=Hs.77266 quiescin Q6 /FL=gb:L42379.1 gb:U97276.2 gb:NM_002826.2 </td> <td> NM_002826 </td> <td> quiescin Q6 sulfhydryl oxidase 1 </td> <td> QSOX1 </td> <td> 5768 </td> <td> NM_001004128 /// NM_002826 </td> <td> 0006457 // protein folding // inferred from direct assay /// 0006457 // protein folding // inferred from genetic interaction /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030173 // integral component of Golgi membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003756 // protein disulfide isomerase activity // inferred from direct assay /// 0003756 // protein disulfide isomerase activity // inferred from genetic interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016971 // flavin-linked sulfhydryl oxidase activity // inferred from direct assay /// 0016971 // flavin-linked sulfhydryl oxidase activity // inferred from genetic interaction /// 0016972 // thiol oxidase activity // inferred from electronic annotation </td> <td> -21.50 </td> <td> 322.15 </td> <td> -0.70 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218853_s_at </td> <td> 218853_s_at </td> <td> NM_019556 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019556.1 /DEF=Homo sapiens hypothetical protein dJ473B4 (DJ473B4), mRNA. /FEA=mRNA /GEN=DJ473B4 /PROD=hypothetical protein dJ473B4 /DB_XREF=gi:9506542 /UG=Hs.57549 hypothetical protein dJ473B4 /FL=gb:NM_019556.1 </td> <td> NM_019556 </td> <td> motile sperm domain containing 1 </td> <td> MOSPD1 </td> <td> 56180 </td> <td> NM_019556 /// XM_005262446 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation </td> <td> 15.55 </td> <td> 172.43 </td> <td> 0.70 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 212716_s_at </td> <td> 212716_s_at </td> <td> AW083133 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW083133 /FEA=EST /DB_XREF=gi:6038285 /DB_XREF=est:xc06e03.x1 /CLONE=IMAGE:2583484 /UG=Hs.324925 LATS (large tumor suppressor, Drosophila) homolog 1 </td> <td> AW083133 </td> <td> eukaryotic translation initiation factor 3, subunit K </td> <td> EIF3K </td> <td> 27335 </td> <td> NM_013234 /// XM_006723147 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation </td> <td> 22.50 </td> <td> 503.77 </td> <td> 0.70 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208710_s_at </td> <td> 208710_s_at </td> <td> AI424923 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI424923 /FEA=EST /DB_XREF=gi:4270841 /DB_XREF=est:tg19a07.x1 /CLONE=IMAGE:2109204 /UG=Hs.75056 adaptor-related protein complex 3, delta 1 subunit /FL=gb:AF002163.1 </td> <td> AI424923 </td> <td> adaptor-related protein complex 3, delta 1 subunit </td> <td> AP3D1 </td> <td> 8943 </td> <td> NM_001077523 /// NM_001261826 /// NM_003938 /// XM_006722932 </td> <td> 0006726 // eye pigment biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0008089 // anterograde axon cargo transport // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032438 // melanosome organization // inferred by curator /// 0033365 // protein localization to organelle // inferred from electronic annotation /// 0035646 // endosome to melanosome transport // inferred from mutant phenotype /// 0048007 // antigen processing and presentation, exogenous lipid antigen via MHC class Ib // inferred from electronic annotation /// 0048490 // anterograde synaptic vesicle transport // inferred from sequence or structural similarity /// 0048499 // synaptic vesicle membrane organization // inferred from electronic annotation /// 0051138 // positive regulation of NK T cell differentiation // inferred from electronic annotation /// 0061088 // regulation of sequestering of zinc ion // inferred from mutant phenotype /// 0072657 // protein localization to membrane // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005794 // Golgi apparatus // traceable author statement /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043195 // terminal bouton // inferred from electronic annotation </td> <td> 0005215 // transporter activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> 10.88 </td> <td> 41.21 </td> <td> 0.70 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211282_x_at </td> <td> 211282_x_at </td> <td> U94506 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U94506.1 /DEF=Human lymphocyte associated receptor of death 5 mRNA, alternatively spliced, complete cds.  /FEA=mRNA /PROD=lymphocyte associated receptor of death 5 /DB_XREF=gi:2071958 /UG=Hs.180338 tumor necrosis factor receptor superfamily, member 12 (translocating chain-association membrane protein) /FL=gb:U94506.1 </td> <td> U94506 </td> <td> tumor necrosis factor receptor superfamily, member 25 </td> <td> TNFRSF25 </td> <td> 8718 </td> <td> NM_001039664 /// NM_003790 /// NM_148965 /// NM_148966 /// NM_148967 /// NM_148968 /// NM_148969 /// NM_148970 /// NM_148974 </td> <td> 0006915 // apoptotic process // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // traceable author statement /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // non-traceable author statement /// 0005031 // tumor necrosis factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 10.90 </td> <td> 88.67 </td> <td> 0.70 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201120_s_at </td> <td> 201120_s_at </td> <td> AL547946 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL547946 /FEA=EST /DB_XREF=gi:12882489 /DB_XREF=est:AL547946 /CLONE=CS0DI035YB22 (5 prime) /UG=Hs.90061 progesterone binding protein /FL=gb:NM_006667.2 </td> <td> AL547946 </td> <td> progesterone receptor membrane component 1 </td> <td> PGRMC1 </td> <td> 10857 </td> <td> NM_001282621 /// NM_006667 </td> <td> 0007411 // axon guidance // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation </td> <td> -19.60 </td> <td> 135.10 </td> <td> -0.70 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203912_s_at </td> <td> 203912_s_at </td> <td> NM_006730 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006730.1 /DEF=Homo sapiens deoxyribonuclease I-like 1 (DNASE1L1), mRNA. /FEA=mRNA /GEN=DNASE1L1 /PROD=deoxyribonuclease I-like 1 /DB_XREF=gi:5803006 /UG=Hs.77091 deoxyribonuclease I-like 1 /FL=gb:U06846.1 gb:NM_006730.1 </td> <td> NM_006730 </td> <td> deoxyribonuclease I-like 1 </td> <td> DNASE1L1 </td> <td> 1774 </td> <td> NM_001009932 /// NM_001009933 /// NM_001009934 /// NM_006730 /// XM_005277829 </td> <td> 0000737 // DNA catabolic process, endonucleolytic // inferred from electronic annotation /// 0006259 // DNA metabolic process // traceable author statement /// 0006308 // DNA catabolic process // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004536 // deoxyribonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016888 // endodeoxyribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation </td> <td> 15.25 </td> <td> 105.40 </td> <td> 0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 204257_at </td> <td> 204257_at </td> <td> NM_021727 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021727.1 /DEF=Homo sapiens fatty acid desaturase 3 (FADS3), mRNA. /FEA=mRNA /GEN=FADS3 /PROD=fatty acid desaturase 3 /DB_XREF=gi:13375615 /UG=Hs.21765 fatty acid desaturase 3 /FL=gb:AF084560.1 gb:NM_021727.1 gb:BC004901.1 gb:AF134404.1 </td> <td> NM_021727 </td> <td> fatty acid desaturase 3 </td> <td> FADS3 </td> <td> 3995 </td> <td> NM_021727 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006636 // unsaturated fatty acid biosynthetic process // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016717 // oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation </td> <td> -25.88 </td> <td> 244.86 </td> <td> -0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217814_at </td> <td> 217814_at </td> <td> NM_020198 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020198.1 /DEF=Homo sapiens GK001 protein (GK001), mRNA. /FEA=mRNA /GEN=GK001 /PROD=GK001 protein /DB_XREF=gi:9910241 /UG=Hs.8207 GK001 protein /FL=gb:AF113221.1 gb:BC001300.1 gb:AF226054.1 gb:NM_020198.1 </td> <td> NM_020198 </td> <td> coiled-coil domain containing 47 </td> <td> CCDC47 </td> <td> 57003 </td> <td> NM_020198 /// XM_005257527 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006983 // ER overload response // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 13.78 </td> <td> 245.19 </td> <td> 0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 221485_at </td> <td> 221485_at </td> <td> AL035683 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL035683 /DEF=Human DNA sequence from clone RP5-1063B2 on chromosome 20q13.1-13.2. Contains the 3 part of the gene for Beta-1,4-galactosyltransferase, ESTs, STSs and GSSs /FEA=mRNA /DB_XREF=gi:7288039 /UG=Hs.107526 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 /FL=gb:AB004550.1 gb:AF038663.1 gb:NM_004776.1 </td> <td> AL035683 </td> <td> UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 </td> <td> B4GALT5 </td> <td> 9334 </td> <td> NM_004776 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0018146 // keratan sulfate biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0042339 // keratan sulfate metabolic process // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008378 // galactosyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -11.42 </td> <td> 293.11 </td> <td> -0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200087_s_at </td> <td> 200087_s_at </td> <td> AK024976 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024976.1 /DEF=Homo sapiens cDNA: FLJ21323 fis, clone COL02374. /FEA=mRNA /DB_XREF=gi:10437405 /UG=Hs.75914 Homo sapiens cDNA: FLJ21323 fis, clone COL02374 </td> <td> AK024976 </td> <td> transmembrane emp24 domain trafficking protein 2 </td> <td> TMED2 </td> <td> 10959 </td> <td> NM_006815 /// XM_005253544 </td> <td> 0001893 // maternal placenta development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from direct assay /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0034260 // negative regulation of GTPase activity // inferred from direct assay /// 0035459 // cargo loading into vesicle // traceable author statement /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0072661 // protein targeting to plasma membrane // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from sequence or structural similarity /// 0030137 // COPI-coated vesicle // inferred from sequence or structural similarity /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042589 // zymogen granule membrane // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 60.88 </td> <td> 1126.31 </td> <td> 0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202223_at </td> <td> 202223_at </td> <td> NM_002219 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002219.1 /DEF=Homo sapiens integral membrane protein 1 (ITM1), mRNA. /FEA=mRNA /GEN=ITM1 /PROD=integral membrane protein 1 /DB_XREF=gi:4504786 /UG=Hs.287850 integral membrane protein 1 /FL=gb:NM_002219.1 gb:L38961.1 </td> <td> NM_002219 </td> <td> STT3A, subunit of the oligosaccharyltransferase complex (catalytic) </td> <td> STT3A </td> <td> 3703 </td> <td> NM_001278503 /// NM_001278504 /// NM_152713 </td> <td> 0006486 // protein glycosylation // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // inferred from mutant phenotype /// 0018279 // protein N-linked glycosylation via asparagine // inferred from sequence or structural similarity /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043686 // co-translational protein modification // inferred from mutant phenotype /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0008250 // oligosaccharyltransferase complex // inferred from sequence or structural similarity /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004576 // oligosaccharyl transferase activity // inferred from electronic annotation /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from mutant phenotype /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation </td> <td> 16.63 </td> <td> 168.01 </td> <td> 0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211936_at </td> <td> 211936_at </td> <td> AF216292 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF216292.1 /DEF=Homo sapiens endoplasmic reticulum lumenal Ca2+ binding protein grp78 mRNA, complete cds.  /FEA=CDS /PROD=endoplasmic reticulum lumenal Ca2+ bindingprotein grp78 /DB_XREF=gi:7229461 /UG=Hs.75410 heat shock 70kD protein 5 (glucose-regulated protein, 78kD) /FL=gb:AF216292.1 </td> <td> AF216292 </td> <td> heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) </td> <td> HSPA5 </td> <td> 3309 </td> <td> NM_005347 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006983 // ER overload response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0021589 // cerebellum structural organization // inferred from electronic annotation /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0035437 // maintenance of protein localization in endoplasmic reticulum // inferred from mutant phenotype /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation /// 0060904 // regulation of protein folding in endoplasmic reticulum // traceable author statement /// 0071236 // cellular response to antibiotic // inferred from electronic annotation /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from mutant phenotype /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0008180 // COP9 signalosome // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0034663 // endoplasmic reticulum chaperone complex // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from physical interaction /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030674 // protein binding, bridging // non-traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement /// 0051087 // chaperone binding // traceable author statement /// 0051787 // misfolded protein binding // inferred from direct assay </td> <td> 80.68 </td> <td> 2175.41 </td> <td> 0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208703_s_at </td> <td> 208703_s_at </td> <td> BG427393 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG427393 /FEA=EST /DB_XREF=gi:13333995 /DB_XREF=est:602499110F1 /CLONE=IMAGE:4612562 /UG=Hs.279518 amyloid beta (A4) precursor-like protein 2 /FL=gb:BC000373.1 </td> <td> BG427393 </td> <td> amyloid beta (A4) precursor-like protein 2 </td> <td> APLP2 </td> <td> 334 </td> <td> NM_001142276 /// NM_001142277 /// NM_001142278 /// NM_001243299 /// NM_001642 /// NR_024515 /// NR_024516 </td> <td> 0001967 // suckling behavior // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046914 // transition metal ion binding // inferred from electronic annotation </td> <td> -46.12 </td> <td> 969.51 </td> <td> -0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216274_s_at </td> <td> 216274_s_at </td> <td> N99438 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N99438 /FEA=EST /DB_XREF=gi:1270864 /DB_XREF=est:yz96c06.r1 /CLONE=IMAGE:290890 /UG=Hs.9534 signal peptidase complex (18kD) </td> <td> N99438 </td> <td> SEC11 homolog A (S. cerevisiae) </td> <td> SEC11A </td> <td> 23478 </td> <td> NM_001271918 /// NM_001271919 /// NM_001271920 /// NM_001271921 /// NM_001271922 /// NM_014300 /// NR_073518 </td> <td> 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -43.95 </td> <td> 814.90 </td> <td> -0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 220945_x_at </td> <td> 220945_x_at </td> <td> NM_018050 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018050.1 /DEF=Homo sapiens hypothetical protein FLJ10298 (FLJ10298), mRNA. /FEA=mRNA /GEN=FLJ10298 /PROD=hypothetical protein FLJ10298 /DB_XREF=gi:8922334 /UG=Hs.5999 hypothetical protein FLJ10298 /FL=gb:NM_018050.1 </td> <td> NM_018050 </td> <td> MANSC domain containing 1 </td> <td> MANSC1 </td> <td> 54682 </td> <td> NM_018050 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 31.90 </td> <td> 180.57 </td> <td> 0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200844_s_at </td> <td> 200844_s_at </td> <td> BE869583 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE869583 /FEA=EST /DB_XREF=gi:10318463 /DB_XREF=est:601445695F1 /CLONE=IMAGE:3849815 /UG=Hs.120 anti-oxidant protein 2 (non-selenium glutathione peroxidase, acidic calcium-independent phospholipase A2) /FL=gb:D14662.1 gb:NM_004905.1 </td> <td> BE869583 </td> <td> peroxiredoxin 6 </td> <td> PRDX6 </td> <td> 9588 </td> <td> NM_004905 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from direct assay /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0042744 // hydrogen peroxide catabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004601 // peroxidase activity // inferred from electronic annotation /// 0004602 // glutathione peroxidase activity // inferred from electronic annotation /// 0004623 // phospholipase A2 activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016209 // antioxidant activity // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0051920 // peroxiredoxin activity // inferred from electronic annotation </td> <td> 30.78 </td> <td> 714.29 </td> <td> 0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217950_at </td> <td> 217950_at </td> <td> NM_015953 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015953.1 /DEF=Homo sapiens CGI-25 protein (LOC51070), mRNA. /FEA=mRNA /GEN=LOC51070 /PROD=CGI-25 protein /DB_XREF=gi:7705715 /UG=Hs.7236 CGI-25 protein /FL=gb:AF132959.1 gb:NM_015953.1 </td> <td> NM_015953 </td> <td> nitric oxide synthase interacting protein </td> <td> NOSIP </td> <td> 51070 </td> <td> NM_001270960 /// NM_015953 /// XM_005258964 /// XM_006723235 </td> <td> 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051001 // negative regulation of nitric-oxide synthase activity // inferred from direct assay </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -18.25 </td> <td> 120.75 </td> <td> -0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201122_x_at </td> <td> 201122_x_at </td> <td> BC000751 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000751.1 /DEF=Homo sapiens, eukaryotic translation initiation factor 5A, clone MGC:2453, mRNA, complete cds.  /FEA=mRNA /PROD=eukaryotic translation initiation factor 5A /DB_XREF=gi:12653914 /UG=Hs.119140 eukaryotic translation initiation factor 5A /FL=gb:BC000751.1 gb:BC001832.1 gb:M23419.1 gb:NM_001970.1 </td> <td> BC000751 </td> <td> eukaryotic translation initiation factor 5A </td> <td> EIF5A </td> <td> 1984 </td> <td> NM_001143760 /// NM_001143761 /// NM_001143762 /// NM_001970 /// XM_005256509 </td> <td> 0006406 // mRNA export from nucleus // inferred from mutant phenotype /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0006452 // translational frameshifting // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008612 // peptidyl-lysine modification to peptidyl-hypusine // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045901 // positive regulation of translational elongation // inferred from sequence or structural similarity /// 0045905 // positive regulation of translational termination // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005642 // annulate lamellae // inferred from direct assay /// 0005643 // nuclear pore // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from direct assay /// 0003746 // translation elongation factor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0017070 // U6 snRNA binding // inferred from direct assay /// 0043022 // ribosome binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -11.83 </td> <td> 147.91 </td> <td> -0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 204219_s_at </td> <td> 204219_s_at </td> <td> NM_002802 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002802.1 /DEF=Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 1 (PSMC1), mRNA.  /FEA=mRNA /GEN=PSMC1 /PROD=proteasome (prosome, macropain) 26S subunit,ATPase, 1 /DB_XREF=gi:4506206 /UG=Hs.4745 proteasome (prosome, macropain) 26S subunit, ATPase, 1 /FL=gb:L02426.1 gb:NM_002802.1 </td> <td> NM_002802 </td> <td> proteasome (prosome, macropain) 26S subunit, ATPase, 1 </td> <td> PSMC1 </td> <td> 5700 </td> <td> NM_002802 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement </td> <td> 0000502 // proteasome complex // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0009378 // four-way junction helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0017025 // TBP-class protein binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -22.60 </td> <td> 742.62 </td> <td> -0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 215230_x_at </td> <td> 215230_x_at </td> <td> AA679705 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA679705 /FEA=EST /DB_XREF=gi:2660227 /DB_XREF=est:ah15e04.s1 /CLONE=IMAGE:1156734 /UG=Hs.4835 eukaryotic translation initiation factor 3, subunit 8 (110kD) </td> <td> AA679705 </td> <td> eukaryotic translation initiation factor 3, subunit C /// eukaryotic translation initiation factor 3, subunit C-like </td> <td> EIF3C /// EIF3CL </td> <td> 8663 /// 728689 </td> <td> NM_001037808 /// NM_001099661 /// NM_001199142 /// NM_001267574 /// NM_001286478 /// NM_003752 /// XM_005255535 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from electronic annotation /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031369 // translation initiation factor binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 98.60 </td> <td> 717.10 </td> <td> 0.69 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203085_s_at </td> <td> 203085_s_at </td> <td> BC000125 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000125.1 /DEF=Homo sapiens, Similar to transforming growth factor, beta 1, clone MGC:3119, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to transforming growth factor, beta 1 /DB_XREF=gi:12652748 /UG=Hs.1103 transforming growth factor, beta 1 /FL=gb:NM_000660.1 gb:BC000125.1 gb:BC001180.1 gb:M38449.1 </td> <td> BC000125 </td> <td> transforming growth factor, beta 1 </td> <td> TGFB1 </td> <td> 7040 </td> <td> NM_000660 </td> <td> 0000060 // protein import into nucleus, translocation // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000165 // MAPK cascade // inferred from mutant phenotype /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001763 // morphogenesis of a branching structure // inferred from electronic annotation /// 0001775 // cell activation // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from direct assay /// 0002244 // hematopoietic progenitor cell differentiation // inferred from direct assay /// 0002248 // connective tissue replacement involved in inflammatory response wound healing // traceable author statement /// 0002460 // adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains // inferred from electronic annotation /// 0002513 // tolerance induction to self antigen // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006611 // protein export from nucleus // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from direct assay /// 0006796 // phosphate-containing compound metabolic process // inferred from direct assay /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007093 // mitotic cell cycle checkpoint // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007182 // common-partner SMAD protein phosphorylation // inferred from direct assay /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0007184 // SMAD protein import into nucleus // inferred from direct assay /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from expression pattern /// 0007492 // endoderm development // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0009611 // response to wounding // inferred from expression pattern /// 0009749 // response to glucose // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009817 // defense response to fungus, incompatible interaction // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0010716 // negative regulation of extracellular matrix disassembly // inferred by curator /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010718 // positive regulation of epithelial to mesenchymal transition // non-traceable author statement /// 0010742 // macrophage derived foam cell differentiation // inferred by curator /// 0010763 // positive regulation of fibroblast migration // inferred from direct assay /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010936 // negative regulation of macrophage cytokine production // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0016202 // regulation of striated muscle tissue development // inferred from sequence or structural similarity /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // traceable author statement /// 0019049 // evasion or tolerance of host defenses by virus // inferred from direct assay /// 0019058 // viral life cycle // traceable author statement /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030334 // regulation of cell migration // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030501 // positive regulation of bone mineralization // inferred from expression pattern /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0031536 // positive regulation of exit from mitosis // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0032270 // positive regulation of cellular protein metabolic process // inferred from direct assay /// 0032355 // response to estradiol // inferred from direct assay /// 0032570 // response to progesterone // inferred from direct assay /// 0032740 // positive regulation of interleukin-17 production // inferred from direct assay /// 0032801 // receptor catabolic process // inferred from direct assay /// 0032930 // positive regulation of superoxide anion generation // inferred from direct assay /// 0032943 // mononuclear cell proliferation // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from direct assay /// 0032967 // positive regulation of collagen biosynthetic process // inferred from mutant phenotype /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0034616 // response to laminar fluid shear stress // inferred from electronic annotation /// 0035066 // positive regulation of histone acetylation // inferred from electronic annotation /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042110 // T cell activation // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation /// 0042306 // regulation of protein import into nucleus // inferred from sequence or structural similarity /// 0042307 // positive regulation of protein import into nucleus // inferred from direct assay /// 0042482 // positive regulation of odontogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0043011 // myeloid dendritic cell differentiation // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043491 // protein kinase B signaling // inferred from mutant phenotype /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from direct assay /// 0043932 // ossification involved in bone remodeling // inferred from expression pattern /// 0045066 // regulatory T cell differentiation // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from direct assay /// 0045662 // negative regulation of myoblast differentiation // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046732 // active induction of host immune response by virus // traceable author statement /// 0048298 // positive regulation of isotype switching to IgA isotypes // inferred from direct assay /// 0048535 // lymph node development // inferred from sequence or structural similarity /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048642 // negative regulation of skeletal muscle tissue development // inferred from direct assay /// 0048839 // inner ear development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from direct assay /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from direct assay /// 0050765 // negative regulation of phagocytosis // inferred from electronic annotation /// 0050777 // negative regulation of immune response // inferred from electronic annotation /// 0050868 // negative regulation of T cell activation // inferred from electronic annotation /// 0050921 // positive regulation of chemotaxis // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051098 // regulation of binding // inferred from sequence or structural similarity /// 0051101 // regulation of DNA binding // inferred from sequence or structural similarity /// 0051152 // positive regulation of smooth muscle cell differentiation // inferred from electronic annotation /// 0051280 // negative regulation of release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from direct assay /// 0060312 // regulation of blood vessel remodeling // inferred by curator /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060364 // frontal suture morphogenesis // inferred from electronic annotation /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from direct assay /// 0060744 // mammary gland branching involved in thelarche // inferred from electronic annotation /// 0060751 // branch elongation involved in mammary gland duct branching // inferred from electronic annotation /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0061035 // regulation of cartilage development // inferred from electronic annotation /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation /// 0070723 // response to cholesterol // inferred from direct assay /// 0071158 // positive regulation of cell cycle arrest // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay /// 0071549 // cellular response to dexamethasone stimulus // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from direct assay /// 0085029 // extracellular matrix assembly // inferred from direct assay /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0097191 // extrinsic apoptotic signaling pathway // inferred from direct assay /// 1900126 // negative regulation of hyaluronan biosynthetic process // inferred from direct assay /// 1901203 // positive regulation of extracellular matrix assembly // inferred by curator /// 1901666 // positive regulation of NAD+ ADP-ribosyltransferase activity // inferred from direct assay /// 2000628 // regulation of miRNA metabolic process // inferred from direct assay /// 2000679 // positive regulation of transcription regulatory region DNA binding // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from direct assay /// 0009986 // cell surface // inferred from mutant phenotype /// 0030141 // secretory granule // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0001948 // glycoprotein binding // inferred from physical interaction /// 0003823 // antigen binding // inferred from physical interaction /// 0005114 // type II transforming growth factor beta receptor binding // inferred from direct assay /// 0005114 // type II transforming growth factor beta receptor binding // inferred from physical interaction /// 0005125 // cytokine activity // traceable author statement /// 0005160 // transforming growth factor beta receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation </td> <td> 17.27 </td> <td> 387.64 </td> <td> 0.68 </td> <td> 0.51 </td> <td> 0.59 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202118_s_at </td> <td> 202118_s_at </td> <td> AA541758 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA541758 /FEA=EST /DB_XREF=gi:2288192 /DB_XREF=est:ni87d05.s1 /CLONE=IMAGE:983817 /UG=Hs.14158 copine III /FL=gb:AB014536.1 gb:NM_003909.1 gb:AF077226.2 </td> <td> AA541758 </td> <td> copine III </td> <td> CPNE3 </td> <td> 8895 </td> <td> NM_003909 /// XM_005251093 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0006629 // lipid metabolic process // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement </td> <td> 0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 21.33 </td> <td> 160.39 </td> <td> 0.68 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217969_at </td> <td> 217969_at </td> <td> NM_013265 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013265.2 /DEF=Homo sapiens chromosome 11 open reading frame2 (C11ORF2), mRNA. /FEA=mRNA /GEN=C11ORF2 /PROD=chromosome 11 open reading frame2 /DB_XREF=gi:8393008 /UG=Hs.5258 chromosome 11 open reading frame2 /FL=gb:AF024631.2 gb:NM_013265.2 </td> <td> NM_013265 </td> <td> vacuolar protein sorting 51 homolog (S. cerevisiae) </td> <td> VPS51 </td> <td> 738 </td> <td> NM_013265 /// NR_073519 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0006893 // Golgi to plasma membrane transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from mutant phenotype /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay </td> <td> 0000145 // exocyst // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000938 // GARP complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016021 // integral component of membrane // traceable author statement /// 0017119 // Golgi transport complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -26.08 </td> <td> 232.06 </td> <td> -0.68 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 206875_s_at </td> <td> 206875_s_at </td> <td> NM_014720 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014720.1 /DEF=Homo sapiens Ste20-related serinethreonine kinase (KIAA0204), mRNA.  /FEA=mRNA /GEN=KIAA0204 /PROD=Ste20-related serinethreonine kinase /DB_XREF=gi:7661993 /UG=Hs.105751 Ste20-related serinethreonine kinase /FL=gb:D86959.1 gb:NM_014720.1 </td> <td> NM_014720 </td> <td> STE20-like kinase </td> <td> SLK </td> <td> 9748 </td> <td> NM_014720 /// XM_005270301 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // not recorded /// 0046777 // protein autophosphorylation // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> -9.57 </td> <td> 149.61 </td> <td> -0.68 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209390_at </td> <td> 209390_at </td> <td> AF013168 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF013168.1 /DEF=Homo sapiens hamartin (TSC1) mRNA, complete cds. /FEA=mRNA /GEN=TSC1 /PROD=hamartin /DB_XREF=gi:2331280 /UG=Hs.79393 tuberous sclerosis 1 (hamartin) /FL=gb:AF013168.1 gb:NM_000368.1 </td> <td> AF013168 </td> <td> tuberous sclerosis 1 </td> <td> TSC1 </td> <td> 7248 </td> <td> NM_000368 /// NM_001008567 /// NM_001162426 /// NM_001162427 /// XM_005272211 /// XM_006717271 /// XM_006717272 </td> <td> 0001822 // kidney development // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from mutant phenotype /// 0006407 // rRNA export from nucleus // inferred from mutant phenotype /// 0006417 // regulation of translation // inferred from direct assay /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007399 // nervous system development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling // inferred from mutant phenotype /// 0032862 // activation of Rho GTPase activity // inferred from direct assay /// 0032868 // response to insulin // inferred from direct assay /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from mutant phenotype /// 0045792 // negative regulation of cell size // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // not recorded /// 0050808 // synapse organization // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051492 // regulation of stress fiber assembly // inferred from direct assay /// 0051726 // regulation of cell cycle // not recorded /// 0051893 // regulation of focal adhesion assembly // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005884 // actin filament // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030027 // lamellipodium // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0033596 // TSC1-TSC2 complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030695 // GTPase regulator activity // not recorded /// 0032794 // GTPase activating protein binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> 10.20 </td> <td> 104.33 </td> <td> 0.68 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201315_x_at </td> <td> 201315_x_at </td> <td> NM_006435 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006435.1 /DEF=Homo sapiens interferon induced transmembrane protein 2 (1-8D) (IFITM2), mRNA.  /FEA=mRNA /GEN=IFITM2 /PROD=interferon induced transmembrane protein 2(1-8D) /DB_XREF=gi:10835237 /UG=Hs.174195 interferon induced transmembrane protein 2 (1-8D) /FL=gb:NM_006435.1 </td> <td> NM_006435 </td> <td> interferon induced transmembrane protein 2 </td> <td> IFITM2 </td> <td> 10581 </td> <td> NM_006435 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0009607 // response to biotic stimulus // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0034341 // response to interferon-gamma // inferred from direct assay /// 0035455 // response to interferon-alpha // inferred from direct assay /// 0035456 // response to interferon-beta // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // inferred from electronic annotation /// 0046597 // negative regulation of viral entry into host cell // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 25.87 </td> <td> 1044.49 </td> <td> 0.68 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209429_x_at </td> <td> 209429_x_at </td> <td> AF112207 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF112207.1 /DEF=Homo sapiens translation initiation factor eIF-2b delta subunit mRNA, complete cds.  /FEA=mRNA /PROD=translation initiation factor eIF-2b deltasubunit /DB_XREF=gi:6563201 /UG=Hs.169474 DKFZP586J0119 protein /FL=gb:BC001870.1 gb:AF112207.1 </td> <td> AF112207 </td> <td> eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa </td> <td> EIF2B4 </td> <td> 8890 </td> <td> NM_001034116 /// NM_015636 /// NM_172195 /// XM_005264632 /// XM_006712132 </td> <td> 0001541 // ovarian follicle development // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // non-traceable author statement /// 0006446 // regulation of translational initiation // not recorded /// 0009408 // response to heat // inferred from sequence or structural similarity /// 0009408 // response to heat // traceable author statement /// 0009749 // response to glucose // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0014003 // oligodendrocyte development // inferred from mutant phenotype /// 0019509 // L-methionine salvage from methylthioadenosine // not recorded /// 0032057 // negative regulation of translational initiation in response to stress // inferred from sequence or structural similarity /// 0042552 // myelination // inferred from mutant phenotype /// 0043087 // regulation of GTPase activity // inferred from direct assay /// 0043087 // regulation of GTPase activity // inferred from mutant phenotype /// 0043434 // response to peptide hormone // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045947 // negative regulation of translational initiation // not recorded /// 0051716 // cellular response to stimulus // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005851 // eukaryotic translation initiation factor 2B complex // inferred from direct assay </td> <td> 0003743 // translation initiation factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0031369 // translation initiation factor binding // inferred from sequence or structural similarity /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // not recorded </td> <td> -10.65 </td> <td> 172.10 </td> <td> -0.68 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 204435_at </td> <td> 204435_at </td> <td> NM_014778 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014778.1 /DEF=Homo sapiens KIAA0410 gene product (KIAA0410), mRNA. /FEA=mRNA /GEN=KIAA0410 /PROD=KIAA0410 gene product /DB_XREF=gi:7662097 /UG=Hs.55075 KIAA0410 gene product /FL=gb:AB007870.1 gb:NM_014778.1 </td> <td> NM_014778 </td> <td> nucleoporin like 1 </td> <td> NUPL1 </td> <td> 9818 </td> <td> NM_001008564 /// NM_001008565 /// NM_014089 /// XM_005266600 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0005487 // nucleocytoplasmic transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 13.20 </td> <td> 80.83 </td> <td> 0.68 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200761_s_at </td> <td> 200761_s_at </td> <td> NM_006407 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006407.2 /DEF=Homo sapiens vitamin A responsive; cytoskeleton related (JWA), mRNA.  /FEA=mRNA /GEN=JWA /PROD=vitamin A responsive; cytoskeleton related /DB_XREF=gi:7669496 /UG=Hs.92384 vitamin A responsive; cytoskeleton related /FL=gb:BC005143.1 gb:AF070523.1 gb:AF125530.1 gb:AF161476.1 gb:NM_006407.2 </td> <td> NM_006407 </td> <td> ADP-ribosylation factor-like 6 interacting protein 5 </td> <td> ARL6IP5 </td> <td> 10550 </td> <td> NM_006407 </td> <td> 0008631 // intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from direct assay /// 0010917 // negative regulation of mitochondrial membrane potential // inferred from mutant phenotype /// 0015813 // L-glutamate transport // inferred from sequence or structural similarity /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0051051 // negative regulation of transport // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation </td> <td> 45.85 </td> <td> 670.55 </td> <td> 0.68 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218408_at </td> <td> 218408_at </td> <td> NM_012456 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012456.1 /DEF=Homo sapiens translocase of inner mitochondrial membrane 10 (yeast) homolog (TIMM10), mRNA.  /FEA=mRNA /GEN=TIMM10 /PROD=translocase of inner mitochondrial membrane 10(yeast) homolog /DB_XREF=gi:6912707 /UG=Hs.109571 translocase of inner mitochondrial membrane 10 (yeast) homolog /FL=gb:AF150089.1 gb:AF152354.1 gb:NM_012456.1 </td> <td> NM_012456 </td> <td> translocase of inner mitochondrial membrane 10 homolog (yeast) </td> <td> TIMM10 </td> <td> 26519 </td> <td> NM_012456 </td> <td> 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045039 // protein import into mitochondrial inner membrane // inferred from direct assay /// 0045039 // protein import into mitochondrial inner membrane // inferred from sequence or structural similarity /// 0072321 // chaperone-mediated protein transport // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005744 // mitochondrial inner membrane presequence translocase complex // traceable author statement /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0042719 // mitochondrial intermembrane space protein transporter complex // inferred from direct assay </td> <td> 0005215 // transporter activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> 17.70 </td> <td> 250.45 </td> <td> 0.68 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208717_at </td> <td> 208717_at </td> <td> BC001669 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001669.1 /DEF=Homo sapiens, Similar to oxidase (cytochrome c) assembly 1-like, clone MGC:2171, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to oxidase (cytochrome c) assembly1-like /DB_XREF=gi:12804516 /UG=Hs.151134 oxidase (cytochrome c) assembly 1-like /FL=gb:BC001669.1 gb:NM_005015.1 </td> <td> BC001669 </td> <td> oxidase (cytochrome c) assembly 1-like </td> <td> OXA1L </td> <td> 5018 </td> <td> NM_005015 </td> <td> 0006461 // protein complex assembly // non-traceable author statement /// 0009060 // aerobic respiration // inferred from mutant phenotype /// 0009060 // aerobic respiration // non-traceable author statement /// 0032780 // negative regulation of ATPase activity // inferred from mutant phenotype /// 0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype /// 0033615 // mitochondrial proton-transporting ATP synthase complex assembly // inferred from mutant phenotype /// 0051205 // protein insertion into membrane // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051354 // negative regulation of oxidoreductase activity // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // non-traceable author statement /// 0097031 // mitochondrial respiratory chain complex I biogenesis // inferred from mutant phenotype </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0032592 // integral component of mitochondrial membrane // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0097177 // mitochondrial ribosome binding // inferred from direct assay </td> <td> -19.40 </td> <td> 443.75 </td> <td> -0.68 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 210966_x_at </td> <td> 210966_x_at </td> <td> BC001460 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001460.1 /DEF=Homo sapiens, Similar to hypothetical protein FLJ10378, clone MGC:2954, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to hypothetical protein FLJ10378 /DB_XREF=gi:12655204 /UG=Hs.6214 KIAA0731 protein /FL=gb:BC001460.1 </td> <td> BC001460 </td> <td> La ribonucleoprotein domain family, member 1 </td> <td> LARP1 </td> <td> 23367 </td> <td> NM_015315 /// NM_033551 /// XM_005268404 /// XM_005268406 /// XM_005268407 /// XM_005268408 /// XM_006714775 /// XM_006714776 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0016239 // positive regulation of macroautophagy // inferred from mutant phenotype /// 0031929 // TOR signaling // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0031931 // TORC1 complex // inferred from direct assay </td> <td> 0000339 // RNA cap binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008190 // eukaryotic initiation factor 4E binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from mutant phenotype /// 0031369 // translation initiation factor binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0048027 // mRNA 5'-UTR binding // inferred from direct assay </td> <td> 15.95 </td> <td> 313.23 </td> <td> 0.68 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216438_s_at </td> <td> 216438_s_at </td> <td> AL133228 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL133228 /DEF=Human DNA sequence from clone RP5-1071L10 on chromosome 20 Contains part of a gene for a new member of the thymosininterferon-inducible multigene family, ESTs, STSs and GSSs /FEA=mRNA /DB_XREF=gi:8217426 /UG=Hs.288031 sterol-C5-desaturase (fungal ERG3, delta-5-desaturase)-like </td> <td> AL133228 </td> <td> thymosin beta 4, X-linked </td> <td> TMSB4X </td> <td> 7114 </td> <td> NM_021109 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0042989 // sequestering of actin monomers // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 136.33 </td> <td> 3232.26 </td> <td> 0.68 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 212454_x_at </td> <td> 212454_x_at </td> <td> AI762552 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI762552 /FEA=EST /DB_XREF=gi:5178219 /DB_XREF=est:wh92e10.x1 /CLONE=IMAGE:2388234 /UG=Hs.170311 heterogeneous nuclear ribonucleoprotein D-like </td> <td> AI762552 </td> <td> heterogeneous nuclear ribonucleoprotein D-like </td> <td> HNRNPDL </td> <td> 9987 </td> <td> NM_001207000 /// NM_005463 /// NM_031372 /// NR_003249 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006396 // RNA processing // non-traceable author statement /// 0010468 // regulation of gene expression // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0008143 // poly(A) binding // inferred from direct assay /// 0034046 // poly(G) binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -36.00 </td> <td> 298.23 </td> <td> -0.67 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 210250_x_at </td> <td> 210250_x_at </td> <td> AF067854 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF067854.1 /DEF=Homo sapiens adenylosuccinate lyase (ADSL) mRNA, alternatively spliced, complete cds.  /FEA=mRNA /GEN=ADSL /PROD=adenylosuccinate lyase /DB_XREF=gi:3211983 /UG=Hs.75527 adenylosuccinate lyase /FL=gb:AF067854.1 </td> <td> AF067854 </td> <td> adenylosuccinate lyase </td> <td> ADSL </td> <td> 158 </td> <td> NM_000026 /// NM_001123378 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006163 // purine nucleotide metabolic process // inferred from electronic annotation /// 0006164 // purine nucleotide biosynthetic process // inferred by curator /// 0006167 // AMP biosynthetic process // inferred from direct assay /// 0006189 // 'de novo' IMP biosynthetic process // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from direct assay /// 0009060 // aerobic respiration // inferred from electronic annotation /// 0009152 // purine ribonucleotide biosynthetic process // inferred from electronic annotation /// 0009156 // ribonucleoside monophosphate biosynthetic process // inferred from electronic annotation /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0014850 // response to muscle activity // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0044208 // 'de novo' AMP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051262 // protein tetramerization // inferred from direct assay /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004018 // N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity // inferred from direct assay /// 0004018 // N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0070626 // (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity // inferred from electronic annotation </td> <td> 23.90 </td> <td> 326.62 </td> <td> 0.67 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200840_at </td> <td> 200840_at </td> <td> NM_005548 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005548.1 /DEF=Homo sapiens lysyl-tRNA synthetase (KARS), mRNA. /FEA=mRNA /GEN=KARS /PROD=lysyl-tRNA synthetase /DB_XREF=gi:5031814 /UG=Hs.3100 lysyl-tRNA synthetase /FL=gb:BC004132.1 gb:D32053.1 gb:NM_005548.1 </td> <td> NM_005548 </td> <td> lysyl-tRNA synthetase </td> <td> KARS </td> <td> 3735 </td> <td> NM_001130089 /// NM_005548 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006430 // lysyl-tRNA aminoacylation // inferred from direct assay /// 0008033 // tRNA processing // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015966 // diadenosine tetraphosphate biosynthetic process // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0017101 // aminoacyl-tRNA synthetase multienzyme complex // inferred from electronic annotation </td> <td> 0000049 // tRNA binding // non-traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004824 // lysine-tRNA ligase activity // inferred from direct assay /// 0004824 // lysine-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 33.03 </td> <td> 1306.29 </td> <td> 0.67 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 215222_x_at </td> <td> 215222_x_at </td> <td> AK023406 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK023406.1 /DEF=Homo sapiens cDNA FLJ13344 fis, clone OVARC1002050, highly similar to Homo sapiens mRNA for actin binding protein ABP620.  /FEA=mRNA /DB_XREF=gi:10435330 /UG=Hs.321395 Homo sapiens cDNA FLJ13344 fis, clone OVARC1002050, highly similar to Homo sapiens mRNA for actin binding protein ABP620 </td> <td> AK023406 </td> <td> microtubule-actin crosslinking factor 1 </td> <td> MACF1 </td> <td> 23499 </td> <td> NM_012090 /// NM_033044 /// XM_005270694 /// XM_005270695 /// XM_005270696 /// XM_005270697 /// XM_005270698 /// XM_005270700 /// XM_006710519 /// XM_006710520 /// XM_006710521 /// XM_006710522 /// XM_006710523 /// XM_006710524 /// XM_006710525 /// XM_006710526 /// XM_006710527 /// XM_006710528 /// XM_006710529 /// XM_006710530 /// XM_006710531 /// XM_006710532 /// XM_006710533 /// XM_006710534 /// XM_006710535 /// XM_006710536 /// XM_006710537 /// XM_006710538 /// XM_006710539 /// XM_006710540 </td> <td> 0001707 // mesoderm formation // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006620 // posttranslational protein targeting to membrane // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0010632 // regulation of epithelial cell migration // inferred from sequence or structural similarity /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay /// 0051893 // regulation of focal adhesion assembly // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // non-traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // non-traceable author statement </td> <td> -54.68 </td> <td> 355.81 </td> <td> -0.67 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202196_s_at </td> <td> 202196_s_at </td> <td> NM_013253 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013253.1 /DEF=Homo sapiens dickkopf (Xenopus laevis) homolog 3 (DKK3), mRNA. /FEA=mRNA /GEN=DKK3 /PROD=Dickkopf gene 3 /DB_XREF=gi:7019362 /UG=Hs.4909 dickkopf (Xenopus laevis) homolog 3 /FL=gb:AF177396.1 gb:AB033421.1 gb:AB034203.1 gb:NM_013253.1 </td> <td> NM_013253 </td> <td> dickkopf WNT signaling pathway inhibitor 3 </td> <td> DKK3 </td> <td> 27122 </td> <td> NM_001018057 /// NM_013253 /// NM_015881 /// XM_006718177 /// XM_006718178 /// XM_006718179 /// XM_006718180 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from expression pattern /// 0032348 // negative regulation of aldosterone biosynthetic process // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt signaling pathway // inferred from direct assay /// 2000065 // negative regulation of cortisol biosynthetic process // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement </td> <td>  </td> <td> -12.10 </td> <td> 224.93 </td> <td> -0.67 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211623_s_at </td> <td> 211623_s_at </td> <td> M30448 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M30448.1 /DEF=Human casein kinase II beta subunit mRNA, complete cds. /FEA=mRNA /GEN=CSNK2B /DB_XREF=gi:181154 /FL=gb:M30448.1 </td> <td> M30448 </td> <td> fibrillarin </td> <td> FBL </td> <td> 2091 </td> <td> NM_001436 /// XM_005258651 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016074 // snoRNA metabolic process // inferred from electronic annotation /// 0030488 // tRNA methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0032927 // positive regulation of activin receptor signaling pathway // inferred from mutant phenotype /// 0033211 // adiponectin-activated signaling pathway // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043623 // cellular protein complex assembly // non-traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // non-traceable author statement /// 0051101 // regulation of DNA binding // non-traceable author statement /// 0061154 // endothelial tube morphogenesis // inferred from mutant phenotype /// 1990258 // histone glutamine methylation // inferred from direct assay </td> <td> 0001652 // granular component // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005956 // protein kinase CK2 complex // inferred from electronic annotation /// 0005956 // protein kinase CK2 complex // non-traceable author statement /// 0015030 // Cajal body // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031428 // box C/D snoRNP complex // non-traceable author statement /// 0031515 // tRNA (m1A) methyltransferase complex // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016429 // tRNA (adenine-N1-)-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019887 // protein kinase regulator activity // inferred from electronic annotation /// 0019887 // protein kinase regulator activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 1990259 // histone-glutamine methyltransferase activity // inferred from direct assay </td> <td> 29.25 </td> <td> 612.38 </td> <td> 0.67 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208677_s_at </td> <td> 208677_s_at </td> <td> AL550657 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL550657 /FEA=EST /DB_XREF=gi:12887837 /DB_XREF=est:AL550657 /CLONE=CS0DI058YI15 (5 prime) /UG=Hs.74631 basigin (OK blood group) /FL=gb:M87879.1 gb:L20471.1 gb:D45131.1 gb:L10240.1 gb:NM_001728.1 </td> <td> AL550657 </td> <td> basigin (Ok blood group) </td> <td> BSG </td> <td> 682 </td> <td> NM_001728 /// NM_198589 /// NM_198590 /// NM_198591 /// XM_005259619 </td> <td> 0006090 // pyruvate metabolic process // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046689 // response to mercury ion // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation /// 0072661 // protein targeting to plasma membrane // inferred from sequence or structural similarity </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0002080 // acrosomal membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005537 // mannose binding // inferred from electronic annotation </td> <td> -28.52 </td> <td> 393.89 </td> <td> -0.67 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202899_s_at </td> <td> 202899_s_at </td> <td> NM_003017 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003017.1 /DEF=Homo sapiens splicing factor, arginineserine-rich 3 (SFRS3), mRNA. /FEA=mRNA /GEN=SFRS3 /PROD=splicing factor, arginineserine-rich 3 /DB_XREF=gi:4506900 /UG=Hs.167460 splicing factor, arginineserine-rich 3 /FL=gb:L10838.1 gb:NM_003017.1 </td> <td> NM_003017 </td> <td> serine/arginine-rich splicing factor 3 </td> <td> SRSF3 </td> <td> 6428 </td> <td> NM_003017 /// NR_036610 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -52.18 </td> <td> 825.09 </td> <td> -0.67 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217427_s_at </td> <td> 217427_s_at </td> <td> X75296 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X75296.1 /DEF=H.sapiens TUP1-like enhancer of split gene 1 (TUPLE1) mRNA. /FEA=mRNA /GEN=TUPLE1 /PROD=TUP1 like enhancer of SPLIT gene 1 /DB_XREF=gi:434982 /UG=Hs.172350 HIR (histone cell cycle regulation defective, S. cerevisiae) homolog A </td> <td> X75296 </td> <td> histone cell cycle regulator </td> <td> HIRA </td> <td> 7290 </td> <td> NM_003325 </td> <td> 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007369 // gastrulation // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation </td> <td> 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0016605 // PML body // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 18.27 </td> <td> 79.29 </td> <td> 0.67 </td> <td> 0.52 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 221263_s_at </td> <td> 221263_s_at </td> <td> NM_031287 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031287.1 /DEF=Homo sapiens hypothetical protein MGC3133 (MGC3133), mRNA. /FEA=mRNA /GEN=MGC3133 /PROD=hypothetical protein MGC3133 /DB_XREF=gi:13775199 /FL=gb:NM_031287.1 </td> <td> NM_031287 </td> <td> splicing factor 3b, subunit 5, 10kDa </td> <td> SF3B5 </td> <td> 83443 </td> <td> NM_031287 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005689 // U12-type spliceosomal complex // inferred from direct assay </td> <td>  </td> <td> -18.97 </td> <td> 500.59 </td> <td> -0.67 </td> <td> 0.53 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202077_at </td> <td> 202077_at </td> <td> NM_005003 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005003.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1, alphabeta subcomplex, 1 (8kD, SDAP) (NDUFAB1), mRNA.  /FEA=mRNA /GEN=NDUFAB1 /PROD=NADH dehydrogenase (ubiquinone) 1, alphabetasubcomplex, 1 (8kD, SDAP) /DB_XREF=gi:4826851 /UG=Hs.5556 NADH dehydrogenase (ubiquinone) 1, alphabeta subcomplex, 1 (8kD, SDAP) /FL=gb:AF087660.1 gb:NM_005003.1 </td> <td> NM_005003 </td> <td> NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa </td> <td> NDUFAB1 </td> <td> 4706 </td> <td> NM_005003 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // non-traceable author statement /// 0009249 // protein lipoylation // inferred from mutant phenotype /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // inferred from sequence or structural similarity /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0005759 // mitochondrial matrix // inferred from sequence or structural similarity /// 0031966 // mitochondrial membrane // inferred from sequence or structural similarity /// 0031966 // mitochondrial membrane // non-traceable author statement /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0000036 // ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process // non-traceable author statement /// 0005504 // fatty acid binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> 43.53 </td> <td> 955.71 </td> <td> 0.67 </td> <td> 0.53 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202393_s_at </td> <td> 202393_s_at </td> <td> NM_005655 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005655.1 /DEF=Homo sapiens TGFB inducible early growth response (TIEG), mRNA. /FEA=mRNA /GEN=TIEG /PROD=TGFB inducible early growth response /DB_XREF=gi:5032176 /UG=Hs.82173 TGFB inducible early growth response /FL=gb:U21847.1 gb:NM_005655.1 </td> <td> NM_005655 </td> <td> Kruppel-like factor 10 </td> <td> KLF10 </td> <td> 7071 </td> <td> NM_001032282 /// NM_005655 /// NR_103759 /// NR_103760 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001501 // skeletal system development // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0030282 // bone mineralization // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 1901653 // cellular response to peptide // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -14.57 </td> <td> 324.19 </td> <td> -0.67 </td> <td> 0.53 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203050_at </td> <td> 203050_at </td> <td> NM_005657 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005657.1 /DEF=Homo sapiens tumor protein p53-binding protein, 1 (TP53BP1), mRNA. /FEA=mRNA /GEN=TP53BP1 /PROD=tumor protein p53-binding protein, 1 /DB_XREF=gi:5032188 /UG=Hs.170263 tumor protein p53-binding protein, 1 /FL=gb:AF078776.1 gb:NM_005657.1 </td> <td> NM_005657 </td> <td> tumor protein p53 binding protein 1 </td> <td> TP53BP1 </td> <td> 7158 </td> <td> NM_001141979 /// NM_001141980 /// NM_005657 /// XM_005254634 /// XM_005254635 /// XM_006720666 </td> <td> 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred by curator </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000781 // chromosome, telomeric region // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from mutant phenotype /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0035064 // methylated histone binding // inferred from direct assay /// 0042162 // telomeric DNA binding // inferred from electronic annotation </td> <td> 12.17 </td> <td> 175.71 </td> <td> 0.67 </td> <td> 0.53 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200640_at </td> <td> 200640_at </td> <td> NM_003406 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003406.1 /DEF=Homo sapiens tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, zeta polypeptide (YWHAZ), mRNA.  /FEA=mRNA /GEN=YWHAZ /PROD=tyrosine 3-monooxygenasetryptophan5-monooxygenase activation protein, zeta polypeptide /DB_XREF=gi:4507952 /UG=Hs.75103 tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, zeta polypeptide /FL=gb:BC003623.1 gb:M86400.1 gb:NM_003406.1 gb:U28964.1 </td> <td> NM_003406 </td> <td> tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta </td> <td> YWHAZ </td> <td> 7534 </td> <td> NM_001135699 /// NM_001135700 /// NM_001135701 /// NM_001135702 /// NM_003406 /// NM_145690 /// XM_005251060 /// XM_005251061 /// XM_005251062 /// XM_005251063 </td> <td> 0002553 // histamine secretion by mast cell // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010941 // regulation of cell death // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042629 // mast cell granule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 80.77 </td> <td> 1209.94 </td> <td> 0.66 </td> <td> 0.53 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202860_at </td> <td> 202860_at </td> <td> NM_014856 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014856.1 /DEF=Homo sapiens KIAA0476 gene product (KIAA0476), mRNA. /FEA=mRNA /GEN=KIAA0476 /PROD=KIAA0476 gene product /DB_XREF=gi:7662151 /UG=Hs.6684 KIAA0476 gene product /FL=gb:AB007945.1 gb:NM_014856.1 </td> <td> NM_014856 </td> <td> DENN/MADD domain containing 4B </td> <td> DENND4B </td> <td> 9909 </td> <td> NM_014856 /// XM_005245678 /// XM_005245679 /// XM_006711690 /// XM_006711691 /// XR_426806 </td> <td> 0032313 // regulation of Rab GTPase activity // inferred from direct assay /// 0032483 // regulation of Rab protein signal transduction // inferred from direct assay /// 0032851 // positive regulation of Rab GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0017112 // Rab guanyl-nucleotide exchange factor activity // inferred from direct assay </td> <td> -14.70 </td> <td> 143.40 </td> <td> -0.66 </td> <td> 0.53 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202420_s_at </td> <td> 202420_s_at </td> <td> NM_001357 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001357.2 /DEF=Homo sapiens DEADH (Asp-Glu-Ala-AspHis) box polypeptide 9 (RNA helicase A, nuclear DNA helicase II; leukophysin) (DDX9), transcript variant 1, mRNA.  /FEA=mRNA /GEN=DDX9 /PROD=DEADH (Asp-Glu-Ala-AspHis) box polypeptide 9,isoform 1 /DB_XREF=gi:13514819 /UG=Hs.74578 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 9 (RNA helicase A, nuclear DNA helicase II; leukophysin) /FL=gb:NM_001357.2 gb:L13848.1 </td> <td> NM_001357 </td> <td> DEAH (Asp-Glu-Ala-His) box helicase 9 </td> <td> DHX9 </td> <td> 1660 </td> <td> NM_001357 /// NM_030588 /// NR_033302 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032508 // DNA duplex unwinding // traceable author statement /// 0034605 // cellular response to heat // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 17.12 </td> <td> 151.74 </td> <td> 0.66 </td> <td> 0.53 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202798_at </td> <td> 202798_at </td> <td> NM_006323 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006323.1 /DEF=Homo sapiens SEC24 (S. cerevisiae) related gene family, member B (SEC24B), mRNA.  /FEA=mRNA /GEN=SEC24B /PROD=SEC24 (S. cerevisiae) related gene family,member B /DB_XREF=gi:5454045 /UG=Hs.7239 SEC24 (S. cerevisiae) related gene family, member B /FL=gb:NM_006323.1 </td> <td> NM_006323 </td> <td> SEC24 family member B </td> <td> SEC24B </td> <td> 10427 </td> <td> NM_001042734 /// NM_006323 /// XM_005262688 /// XM_005262689 /// XM_005262691 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0030127 // COPII vesicle coat // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation </td> <td> -18.93 </td> <td> 225.91 </td> <td> -0.66 </td> <td> 0.53 </td> <td> 0.60 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217756_x_at </td> <td> 217756_x_at </td> <td> NM_005770 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005770.1 /DEF=Homo sapiens small EDRK-rich factor 2 (SERF2), mRNA. /FEA=mRNA /GEN=SERF2 /PROD=small EDRK-rich factor 2 /DB_XREF=gi:5032084 /UG=Hs.323806 small EDRK-rich factor 2 /FL=gb:AF320073.1 gb:AF073298.1 gb:NM_005770.1 </td> <td> NM_005770 </td> <td> huntingtin interacting protein K /// microRNA 1282 /// small EDRK-rich factor 2 </td> <td> HYPK /// MIR1282 /// SERF2 </td> <td> 10169 /// 25764 /// 100302254 </td> <td> NM_001018108 /// NM_001199875 /// NM_001199876 /// NM_001199877 /// NM_001199878 /// NM_001199885 /// NM_005770 /// NM_016400 /// NR_031695 /// NR_037672 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -48.18 </td> <td> 1470.66 </td> <td> -0.66 </td> <td> 0.53 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209271_at </td> <td> 209271_at </td> <td> AB032251 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB032251.1 /DEF=Homo sapiens BPTF mRNA for bromodomain PHD finger transcription factor, complete cds.  /FEA=mRNA /GEN=BPTF /PROD=bromodomain PHD finger transcription factor /DB_XREF=gi:6683491 /UG=Hs.99872 fetal Alzheimer antigen /FL=gb:AB032251.1 </td> <td> AB032251 </td> <td> bromodomain PHD finger transcription factor </td> <td> BPTF </td> <td> 2186 </td> <td> NM_004459 /// NM_182641 /// XM_005257150 /// XM_005257151 /// XM_005257152 /// XM_005257153 /// XM_005257154 /// XM_005257155 /// XM_005257156 /// XM_005257157 /// XM_005257158 /// XM_005257159 /// XM_005257160 /// XM_005257161 /// XM_005257162 /// XM_006721770 /// XM_006721771 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007420 // brain development // inferred from mutant phenotype /// 0007492 // endoderm development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016589 // NURF complex // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008134 // transcription factor binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -14.98 </td> <td> 136.86 </td> <td> -0.66 </td> <td> 0.53 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 213242_x_at </td> <td> 213242_x_at </td> <td> AB006622 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB006622.2 /DEF=Homo sapiens mRNA for KIAA0284 protein, partial cds. /FEA=mRNA /GEN=KIAA0284 /PROD=KIAA0284 protein /DB_XREF=gi:6635124 /UG=Hs.182536 KIAA0284 protein </td> <td> AB006622 </td> <td> centrosomal protein 170B </td> <td> CEP170B </td> <td> 283638 </td> <td> NM_001112726 /// NM_015005 /// XM_005267550 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 19.25 </td> <td> 155.28 </td> <td> 0.65 </td> <td> 0.53 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200915_x_at </td> <td> 200915_x_at </td> <td> NM_004986 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004986.1 /DEF=Homo sapiens kinectin 1 (kinesin receptor) (KTN1), mRNA. /FEA=mRNA /GEN=KTN1 /PROD=kinectin 1 (kinesin receptor) /DB_XREF=gi:4826813 /UG=Hs.211577 kinectin 1 (kinesin receptor) /FL=gb:D13629.1 gb:L25616.1 gb:NM_004986.1 </td> <td> NM_004986 </td> <td> kinectin 1 (kinesin receptor) </td> <td> KTN1 </td> <td> 3895 </td> <td> NM_001079521 /// NM_001079522 /// NM_001271014 /// NM_004986 /// NM_182926 /// NR_073128 /// NR_073129 /// XM_006720138 /// XM_006720139 /// XM_006720140 /// XM_006720141 </td> <td> 0007018 // microtubule-based movement // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // traceable author statement /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from electronic annotation </td> <td> 0019894 // kinesin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -30.00 </td> <td> 587.42 </td> <td> -0.65 </td> <td> 0.53 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 221428_s_at </td> <td> 221428_s_at </td> <td> NM_030921 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030921.1 /DEF=Homo sapiens hypothetical protein DC42 (DC42), mRNA. /FEA=CDS /GEN=DC42 /PROD=hypothetical protein DC42 /DB_XREF=gi:13569880 /FL=gb:NM_030921.1 </td> <td> NM_030921 </td> <td> transducin (beta)-like 1 X-linked receptor 1 </td> <td> TBL1XR1 </td> <td> 79718 </td> <td> NM_024665 /// XM_005247771 /// XM_005247772 /// XM_005247775 /// XM_005247776 /// XM_006713745 /// XM_006713746 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060070 // canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005876 // spindle microtubule // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from genetic interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> 11.55 </td> <td> 116.38 </td> <td> 0.65 </td> <td> 0.53 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209039_x_at </td> <td> 209039_x_at </td> <td> AF001434 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF001434.1 /DEF=Human Hpast (HPAST) mRNA, complete cds. /FEA=mRNA /GEN=HPAST /PROD=Hpast /DB_XREF=gi:2529706 /UG=Hs.155119 EH domain containing 1 /FL=gb:AF001434.1 </td> <td> AF001434 </td> <td> EH-domain containing 1 </td> <td> EHD1 </td> <td> 10938 </td> <td> NM_001282444 /// NM_001282445 /// NM_006795 /// XM_006718424 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0010886 // positive regulation of cholesterol storage // inferred from sequence or structural similarity /// 0016197 // endosomal transport // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0032456 // endocytic recycling // inferred from genetic interaction /// 0032456 // endocytic recycling // inferred from mutant phenotype /// 0034383 // low-density lipoprotein particle clearance // inferred from sequence or structural similarity /// 0042632 // cholesterol homeostasis // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from physical interaction /// 1901741 // positive regulation of myoblast fusion // inferred from sequence or structural similarity /// 1990090 // cellular response to nerve growth factor stimulus // inferred from sequence or structural similarity /// 2001137 // positive regulation of endocytic recycling // inferred from sequence or structural similarity </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0010008 // endosome membrane // inferred from sequence or structural similarity /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031095 // platelet dense tubular network membrane // inferred from sequence or structural similarity /// 0031901 // early endosome membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -30.80 </td> <td> 315.57 </td> <td> -0.65 </td> <td> 0.53 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218893_at </td> <td> 218893_at </td> <td> NM_024710 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024710.1 /DEF=Homo sapiens hypothetical protein FLJ23469 (FLJ23469), mRNA. /FEA=mRNA /GEN=FLJ23469 /PROD=hypothetical protein FLJ23469 /DB_XREF=gi:13376006 /UG=Hs.103833 hypothetical protein FLJ23469 /FL=gb:NM_024710.1 </td> <td> NM_024710 </td> <td> isochorismatase domain containing 2 </td> <td> ISOC2 </td> <td> 79763 </td> <td> NM_001136201 /// NM_001136202 /// NM_024710 /// XM_005259265 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 11.10 </td> <td> 115.97 </td> <td> 0.65 </td> <td> 0.53 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 204426_at </td> <td> 204426_at </td> <td> NM_006815 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006815.1 /DEF=Homo sapiens coated vesicle membrane protein (RNP24), mRNA. /FEA=mRNA /GEN=RNP24 /PROD=coated vesicle membrane protein /DB_XREF=gi:5803148 /UG=Hs.323378 coated vesicle membrane protein /FL=gb:NM_006815.1 </td> <td> NM_006815 </td> <td> transmembrane emp24 domain trafficking protein 2 </td> <td> TMED2 </td> <td> 10959 </td> <td> NM_006815 /// XM_005253544 </td> <td> 0001893 // maternal placenta development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from direct assay /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0034260 // negative regulation of GTPase activity // inferred from direct assay /// 0035459 // cargo loading into vesicle // traceable author statement /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0072661 // protein targeting to plasma membrane // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from sequence or structural similarity /// 0030137 // COPI-coated vesicle // inferred from sequence or structural similarity /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042589 // zymogen granule membrane // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -16.55 </td> <td> 202.07 </td> <td> -0.65 </td> <td> 0.54 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201808_s_at </td> <td> 201808_s_at </td> <td> BE732652 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE732652 /FEA=EST /DB_XREF=gi:10146644 /DB_XREF=est:601571266F1 /CLONE=IMAGE:3925601 /UG=Hs.76753 endoglin (Osler-Rendu-Weber syndrome 1) /FL=gb:NM_000118.1 </td> <td> BE732652 </td> <td> endoglin </td> <td> ENG </td> <td> 2022 </td> <td> NM_000118 /// NM_001114753 /// NM_001278138 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001300 // chronological cell aging // inferred from electronic annotation /// 0001300 // chronological cell aging // inferred from expression pattern /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from mutant phenotype /// 0001666 // response to hypoxia // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001947 // heart looping // inferred from sequence or structural similarity /// 0003084 // positive regulation of systemic arterial blood pressure // inferred from mutant phenotype /// 0003273 // cell migration involved in endocardial cushion formation // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007507 // heart development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0016477 // cell migration // inferred from mutant phenotype /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0022009 // central nervous system vasculogenesis // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // inferred from mutant phenotype /// 0030155 // regulation of cell adhesion // traceable author statement /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0030509 // BMP signaling pathway // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030513 // positive regulation of BMP signaling pathway // inferred from direct assay /// 0031953 // negative regulation of protein autophosphorylation // inferred from direct assay /// 0031960 // response to corticosteroid // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0036273 // response to statin // inferred from electronic annotation /// 0042060 // wound healing // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // traceable author statement /// 0042325 // regulation of phosphorylation // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048745 // smooth muscle tissue development // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048845 // venous blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048870 // cell motility // inferred from mutant phenotype /// 0051001 // negative regulation of nitric-oxide synthase activity // inferred from mutant phenotype /// 0060326 // cell chemotaxis // inferred from mutant phenotype /// 0060348 // bone development // inferred from electronic annotation /// 0060394 // negative regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0070278 // extracellular matrix constituent secretion // inferred from electronic annotation /// 0070483 // detection of hypoxia // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071559 // response to transforming growth factor beta // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070022 // transforming growth factor beta receptor homodimeric complex // inferred by curator /// 0072563 // endothelial microparticle // inferred from electronic annotation </td> <td> 0004888 // transmembrane signaling receptor activity // non-traceable author statement /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from direct assay /// 0005072 // transforming growth factor beta receptor, cytoplasmic mediator activity // inferred from direct assay /// 0005114 // type II transforming growth factor beta receptor binding // inferred from physical interaction /// 0005114 // type II transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005534 // galactose binding // inferred from direct assay /// 0005539 // glycosaminoglycan binding // inferred from direct assay /// 0005539 // glycosaminoglycan binding // inferred from sequence or structural similarity /// 0034713 // type I transforming growth factor beta receptor binding // inferred from physical interaction /// 0034713 // type I transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0048185 // activin binding // traceable author statement /// 0050431 // transforming growth factor beta binding // inferred from physical interaction </td> <td> -32.05 </td> <td> 299.80 </td> <td> -0.65 </td> <td> 0.54 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217890_s_at </td> <td> 217890_s_at </td> <td> NM_018222 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018222.1 /DEF=Homo sapiens alpha-parvin (PARVA), mRNA. /FEA=mRNA /GEN=PARVA /PROD=alpha-parvin /DB_XREF=gi:8922672 /UG=Hs.44077 alpha-parvin /FL=gb:AF237771.1 gb:NM_018222.1 </td> <td> NM_018222 </td> <td> parvin, alpha </td> <td> PARVA </td> <td> 55742 </td> <td> NM_018222 /// XM_005253015 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0003148 // outflow tract septum morphogenesis // inferred from sequence or structural similarity /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // inferred from sequence or structural similarity /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0034113 // heterotypic cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0034446 // substrate adhesion-dependent cell spreading // inferred from mutant phenotype /// 0060271 // cilium morphogenesis // inferred from mutant phenotype /// 0070252 // actin-mediated cell contraction // inferred from sequence or structural similarity /// 0071670 // smooth muscle cell chemotaxis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -15.10 </td> <td> 183.97 </td> <td> -0.65 </td> <td> 0.54 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208822_s_at </td> <td> 208822_s_at </td> <td> U18321 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U18321.1 /DEF=Human ionizing radiation resistance conferring protein mRNA, complete cds.  /FEA=mRNA /PROD=ionizing radiation resistance conferringprotein /DB_XREF=gi:603763 /UG=Hs.159627 death associated protein 3 /FL=gb:U18321.1 </td> <td> U18321 </td> <td> death associated protein 3 </td> <td> DAP3 </td> <td> 7818 </td> <td> NM_001199849 /// NM_001199850 /// NM_001199851 /// NM_004632 /// NM_033657 /// XM_005245480 /// XM_005245481 /// XM_005245482 /// XM_006711527 /// XM_006711528 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 12.07 </td> <td> 174.16 </td> <td> 0.65 </td> <td> 0.54 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 214544_s_at </td> <td> 214544_s_at </td> <td> NM_003825 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_003825.1 /DEF=Homo sapiens synaptosomal-associated protein, 23kD (SNAP23), mRNA. /FEA=CDS /GEN=SNAP23 /PROD=synaptosomal-associated protein, 23kD /DB_XREF=gi:4507096 /UG=Hs.184376 synaptosomal-associated protein, 23kD /FL=gb:Y09568.1 gb:NM_003825.1 </td> <td> NM_003825 </td> <td> synaptosomal-associated protein, 23kDa </td> <td> SNAP23 </td> <td> 8773 </td> <td> NM_003825 /// NM_130798 /// XM_006720725 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006903 // vesicle targeting // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0061025 // membrane fusion // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042581 // specific granule // inferred from direct assay /// 0042582 // azurophil granule // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -23.78 </td> <td> 248.59 </td> <td> -0.65 </td> <td> 0.54 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208840_s_at </td> <td> 208840_s_at </td> <td> AU149503 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU149503 /FEA=EST /DB_XREF=gi:11011024 /DB_XREF=est:AU149503 /CLONE=NT2RM4002447 /UG=Hs.6727 Ras-GTPase activating protein SH3 domain-binding protein 2 /FL=gb:AB014560.1 </td> <td> AU149503 </td> <td> GTPase activating protein (SH3 domain) binding protein 2 </td> <td> G3BP2 </td> <td> 9908 </td> <td> NM_012297 /// NM_203504 /// NM_203505 /// XM_005263382 /// XM_005263383 /// XM_005263384 /// XM_005263385 /// XM_005263386 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007253 // cytoplasmic sequestering of NF-kappaB // non-traceable author statement /// 0007265 // Ras protein signal transduction // non-traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 16.03 </td> <td> 206.64 </td> <td> 0.65 </td> <td> 0.54 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200791_s_at </td> <td> 200791_s_at </td> <td> NM_003870 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003870.1 /DEF=Homo sapiens IQ motif containing GTPase activating protein 1 (IQGAP1), mRNA.  /FEA=mRNA /GEN=IQGAP1 /PROD=IQ motif containing GTPase activating protein 1 /DB_XREF=gi:4506786 /UG=Hs.1742 IQ motif containing GTPase activating protein 1 /FL=gb:NM_003870.1 gb:L33075.1 </td> <td> NM_003870 </td> <td> IQ motif containing GTPase activating protein 1 </td> <td> IQGAP1 </td> <td> 8826 </td> <td> NM_003870 /// XM_005254984 </td> <td> 0001817 // regulation of cytokine production // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0035305 // negative regulation of dephosphorylation // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from mutant phenotype /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 0072015 // glomerular visceral epithelial cell development // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005874 // microtubule // inferred from direct assay /// 0005884 // actin filament // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // inferred from direct assay /// 0031252 // cell leading edge // inferred from electronic annotation /// 0036057 // slit diaphragm // inferred from sequence or structural similarity /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005095 // GTPase inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // traceable author statement /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043539 // protein serine/threonine kinase activator activity // inferred from direct assay /// 0048365 // Rac GTPase binding // inferred from electronic annotation </td> <td> -13.40 </td> <td> 547.52 </td> <td> -0.65 </td> <td> 0.54 </td> <td> 0.61 </td> <td> -4.61 </td> </tr>
  <tr> <td> 204527_at </td> <td> 204527_at </td> <td> NM_000259 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000259.1 /DEF=Homo sapiens myosin VA (heavy polypeptide 12, myoxin) (MYO5A), mRNA.  /FEA=mRNA /GEN=MYO5A /PROD=myosin VA (heavy polypeptide 12, myoxin) /DB_XREF=gi:10835118 /UG=Hs.170157 myosin VA (heavy polypeptide 12, myoxin) /FL=gb:NM_000259.1 gb:U90942.1 </td> <td> NM_000259 </td> <td> myosin VA (heavy chain 12, myoxin) </td> <td> MYO5A </td> <td> 4644 </td> <td> NM_000259 /// NM_001142495 /// XM_005254397 /// XM_005254398 /// XM_005254399 /// XM_005254400 /// XM_005254401 /// XM_005254402 /// XM_005254403 </td> <td> 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006582 // melanin metabolic process // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement /// 0006887 // exocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from sequence or structural similarity /// 0030048 // actin filament-based movement // non-traceable author statement /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0031585 // regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from electronic annotation /// 0031987 // locomotion involved in locomotory behavior // inferred from electronic annotation /// 0032252 // secretory granule localization // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0032402 // melanosome transport // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0042438 // melanin biosynthetic process // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0042759 // long-chain fatty acid biosynthetic process // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0051643 // endoplasmic reticulum localization // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0072659 // protein localization to plasma membrane // inferred from sequence or structural similarity </td> <td> 0001726 // ruffle // inferred from direct assay /// 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030426 // growth cone // non-traceable author statement /// 0032593 // insulin-responsive compartment // inferred from sequence or structural similarity /// 0035371 // microtubule plus-end // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042641 // actomyosin // inferred from electronic annotation /// 0043005 // neuron projection // non-traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation </td> <td> 0000146 // microfilament motor activity // non-traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from electronic annotation </td> <td> -9.10 </td> <td> 178.38 </td> <td> -0.64 </td> <td> 0.54 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216515_x_at </td> <td> 216515_x_at </td> <td> AL121585 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL121585 /DEF=Human DNA sequence from clone RP11-504H3 on chromosome 20 Contains the SNX5 gene (sorting nexin 5), a gene similar to PTMA (prothymosin-alpha), the 3 end of a  gene encoding a Zinc-finger protein, two CpG islands, ESTs, STSs and GSSs /FEA=mRNA_1 /DB_XREF=gi:8248733 /UG=Hs.283864 Human DNA sequence from clone RP11-504H3 on chromosome 20 Contains the SNX5 gene (sorting nexin 5), a gene similar to PTMA (prothymosin-alpha), the 3 end of a  gene encoding a Zinc-finger protein, two CpG islands, ESTs, STSs and GSSs </td> <td> AL121585 </td> <td> microRNA 1244-3 </td> <td> MIR1244-3 </td> <td> 100422872 </td> <td> NR_036263 </td> <td>  </td> <td>  </td> <td>  </td> <td> 99.18 </td> <td> 1014.01 </td> <td> 0.64 </td> <td> 0.54 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 213102_at </td> <td> 213102_at </td> <td> Z78330 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:Z78330 /FEA=EST /DB_XREF=gi:1495103 /DB_XREF=est:HSZ78330 /CLONE=2.49 (CEPH) /UG=Hs.10927 hypothetical protein EUROIMAGE1875335 </td> <td> Z78330 </td> <td> ARP3 actin-related protein 3 homolog (yeast) </td> <td> ACTR3 </td> <td> 10096 </td> <td> NM_001277140 /// NM_005721 /// NR_102318 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0008356 // asymmetric cell division // inferred from electronic annotation /// 0009743 // response to carbohydrate // inferred from electronic annotation /// 0010592 // positive regulation of lamellipodium assembly // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0033206 // meiotic cytokinesis // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043519 // regulation of myosin II filament organization // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051321 // meiotic cell cycle // inferred from electronic annotation /// 0051491 // positive regulation of filopodium assembly // inferred from electronic annotation /// 0051653 // spindle localization // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0002102 // podosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> 42.15 </td> <td> 986.42 </td> <td> 0.64 </td> <td> 0.54 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203667_at </td> <td> 203667_at </td> <td> NM_004607 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004607.1 /DEF=Homo sapiens tubulin-specific chaperone a (TBCA), mRNA. /FEA=mRNA /GEN=TBCA /PROD=beta-tubulin cofactor A /DB_XREF=gi:4759211 /UG=Hs.24930 tubulin-specific chaperone a /FL=gb:AF038952.1 gb:NM_004607.1 </td> <td> NM_004607 </td> <td> tubulin folding cofactor A </td> <td> TBCA </td> <td> 6902 </td> <td> NM_004607 /// XM_005248586 </td> <td> 0006457 // protein folding // traceable author statement /// 0007021 // tubulin complex assembly // inferred from electronic annotation /// 0007023 // post-chaperonin tubulin folding pathway // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // traceable author statement </td> <td> 50.08 </td> <td> 628.86 </td> <td> 0.64 </td> <td> 0.54 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209067_s_at </td> <td> 209067_s_at </td> <td> D89092 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D89092.1 /DEF=Homo sapiens hnRNP JKTBP mRNA, complete cds. /FEA=mRNA /GEN=hnRNP JKTBP /DB_XREF=gi:2780747 /UG=Hs.170311 heterogeneous nuclear ribonucleoprotein D-like /FL=gb:D89092.1 gb:D89678.1 </td> <td> D89092 </td> <td> heterogeneous nuclear ribonucleoprotein D-like </td> <td> HNRNPDL </td> <td> 9987 </td> <td> NM_001207000 /// NM_005463 /// NM_031372 /// NR_003249 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006396 // RNA processing // non-traceable author statement /// 0010468 // regulation of gene expression // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0008143 // poly(A) binding // inferred from direct assay /// 0034046 // poly(G) binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 16.85 </td> <td> 535.02 </td> <td> 0.64 </td> <td> 0.54 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201114_x_at </td> <td> 201114_x_at </td> <td> NM_002792 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002792.1 /DEF=Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 (PSMA7), mRNA.  /FEA=mRNA /GEN=PSMA7 /PROD=proteasome (prosome, macropain) subunit, alphatype, 7 /DB_XREF=gi:4506188 /UG=Hs.233952 proteasome (prosome, macropain) subunit, alpha type, 7 /FL=gb:BC004427.1 gb:AF022815.1 gb:AF054185.1 gb:NM_002792.1 </td> <td> NM_002792 </td> <td> proteasome (prosome, macropain) subunit, alpha type, 7 </td> <td> PSMA7 </td> <td> 5688 </td> <td> NM_002792 /// NM_152255 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> -63.13 </td> <td> 842.19 </td> <td> -0.64 </td> <td> 0.54 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218654_s_at </td> <td> 218654_s_at </td> <td> NM_016071 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016071.1 /DEF=Homo sapiens CGI-139 protein (LOC51650), mRNA. /FEA=mRNA /GEN=LOC51650 /PROD=CGI-139 protein /DB_XREF=gi:7706348 /UG=Hs.83006 CGI-139 protein /FL=gb:AF151897.1 gb:AF078858.1 gb:NM_016071.1 </td> <td> NM_016071 </td> <td> mitochondrial ribosomal protein S33 </td> <td> MRPS33 </td> <td> 51650 </td> <td> NM_016071 /// NM_053035 </td> <td> 0006412 // translation // non-traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005763 // mitochondrial small ribosomal subunit // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement </td> <td> -11.40 </td> <td> 162.97 </td> <td> -0.64 </td> <td> 0.54 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 214875_x_at </td> <td> 214875_x_at </td> <td> AW001847 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW001847 /FEA=EST /DB_XREF=gi:5848763 /DB_XREF=est:wt81a04.x1 /CLONE=IMAGE:2513838 /UG=Hs.279518 amyloid beta (A4) precursor-like protein 2 </td> <td> AW001847 </td> <td> amyloid beta (A4) precursor-like protein 2 </td> <td> APLP2 </td> <td> 334 </td> <td> NM_001142276 /// NM_001142277 /// NM_001142278 /// NM_001243299 /// NM_001642 /// NR_024515 /// NR_024516 </td> <td> 0001967 // suckling behavior // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046914 // transition metal ion binding // inferred from electronic annotation </td> <td> -32.80 </td> <td> 631.65 </td> <td> -0.64 </td> <td> 0.54 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211040_x_at </td> <td> 211040_x_at </td> <td> BC006325 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006325.1 /DEF=Homo sapiens, G-2 and S-phase expressed 1, clone MGC:12560, mRNA, complete cds.  /FEA=mRNA /PROD=G-2 and S-phase expressed 1 /DB_XREF=gi:13623450 /FL=gb:BC006325.1 </td> <td> BC006325 </td> <td> G-2 and S-phase expressed 1 </td> <td> GTSE1 </td> <td> 51512 </td> <td> NM_016426 /// XM_005261627 </td> <td> 0000085 // mitotic G2 phase // non-traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // non-traceable author statement /// 0007017 // microtubule-based process // non-traceable author statement /// 0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // non-traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016783 // sulfurtransferase activity // inferred from electronic annotation </td> <td> -13.00 </td> <td> 165.93 </td> <td> -0.64 </td> <td> 0.54 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 215696_s_at </td> <td> 215696_s_at </td> <td> BC001404 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BC001404.1 /DEF=Homo sapiens, clone IMAGE:3139772, mRNA, partial cds. /FEA=mRNA /PROD=Unknown (protein for IMAGE:3139772) /DB_XREF=gi:12655104 /UG=Hs.5716 KIAA0310 gene product </td> <td> BC001404 </td> <td> SEC16 homolog A (S. cerevisiae) </td> <td> SEC16A </td> <td> 9919 </td> <td> NM_001276418 /// NM_014866 /// XM_005266132 /// XM_005266133 /// XM_005266134 /// XM_005266136 /// XM_005266137 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007029 // endoplasmic reticulum organization // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0048208 // COPII vesicle coating // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td>  </td> <td> 13.93 </td> <td> 229.84 </td> <td> 0.64 </td> <td> 0.54 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201651_s_at </td> <td> 201651_s_at </td> <td> NM_007229 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007229.1 /DEF=Homo sapiens protein kinase C and casein kinase substrate in neurons 2 (PACSIN2), mRNA.  /FEA=mRNA /GEN=PACSIN2 /PROD=protein kinase C and casein kinase substrate inneurons 2 /DB_XREF=gi:6005825 /UG=Hs.18842 protein kinase C and casein kinase substrate in neurons 2 /FL=gb:AF128536.1 gb:NM_007229.1 </td> <td> NM_007229 </td> <td> protein kinase C and casein kinase substrate in neurons 2 </td> <td> PACSIN2 </td> <td> 11252 </td> <td> NM_001184970 /// NM_001184971 /// NM_007229 /// XM_005261319 /// XM_006724117 /// XM_006724118 /// XM_006724119 /// XM_006724120 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0036010 // protein localization to endosome // inferred from mutant phenotype /// 0045806 // negative regulation of endocytosis // inferred from electronic annotation /// 0048858 // cell projection morphogenesis // inferred from sequence or structural similarity /// 0070836 // caveola assembly // inferred from mutant phenotype /// 0072584 // caveolin-mediated endocytosis // inferred from mutant phenotype /// 0097320 // membrane tubulation // inferred from direct assay /// 0097320 // membrane tubulation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from sequence or structural similarity /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0070300 // phosphatidic acid binding // inferred from direct assay </td> <td> 27.42 </td> <td> 264.91 </td> <td> 0.64 </td> <td> 0.54 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217942_at </td> <td> 217942_at </td> <td> NM_021821 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021821.1 /DEF=Homo sapiens MDS023 protein (MDS023), mRNA. /FEA=mRNA /GEN=MDS023 /PROD=MDS023 protein /DB_XREF=gi:11141894 /UG=Hs.10724 MDS023 protein /FL=gb:AF182422.1 gb:NM_021821.1 </td> <td> NM_021821 </td> <td> mitochondrial ribosomal protein S35 </td> <td> MRPS35 </td> <td> 60488 </td> <td> NM_001190864 /// NM_021821 </td> <td> 0042769 // DNA damage response, detection of DNA damage // non-traceable author statement /// 0043043 // peptide biosynthetic process // inferred by curator </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005763 // mitochondrial small ribosomal subunit // inferred from sequence or structural similarity /// 0005763 // mitochondrial small ribosomal subunit // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 14.67 </td> <td> 297.09 </td> <td> 0.63 </td> <td> 0.54 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201949_x_at </td> <td> 201949_x_at </td> <td> AL572341 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL572341 /FEA=EST /DB_XREF=gi:12930514 /DB_XREF=est:AL572341 /CLONE=CS0DI007YC13 (3 prime) /UG=Hs.76368 capping protein (actin filament) muscle Z-line, beta /FL=gb:NM_004930.1 gb:U03271.1 </td> <td> AL572341 </td> <td> capping protein (actin filament) muscle Z-line, beta </td> <td> CAPZB </td> <td> 832 </td> <td> NM_001206540 /// NM_001206541 /// NM_001282162 /// NM_004930 /// XM_006710938 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0031115 // negative regulation of microtubule polymerization // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0048747 // muscle fiber development // inferred from electronic annotation /// 0051016 // barbed-end actin filament capping // inferred from electronic annotation /// 0051693 // actin filament capping // inferred from electronic annotation /// 0090036 // regulation of protein kinase C signaling // inferred from electronic annotation </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0008290 // F-actin capping protein complex // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030017 // sarcomere // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071203 // WASH complex // inferred from direct assay </td> <td> 0003779 // actin binding // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation </td> <td> -21.18 </td> <td> 387.46 </td> <td> -0.63 </td> <td> 0.55 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201341_at </td> <td> 201341_at </td> <td> NM_003633 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003633.1 /DEF=Homo sapiens ectodermal-neural cortex (with BTB-like domain) (ENC1), mRNA.  /FEA=mRNA /GEN=ENC1 /PROD=ectodermal-neural cortex (with BTB-like domain) /DB_XREF=gi:4505460 /UG=Hs.104925 ectodermal-neural cortex (with BTB-like domain) /FL=gb:BC000418.1 gb:AF010314.1 gb:AF059611.1 gb:AF005381.1 gb:NM_003633.1 </td> <td> NM_003633 </td> <td> ectodermal-neural cortex 1 (with BTB domain) </td> <td> ENC1 </td> <td> 8507 </td> <td> NM_001256574 /// NM_001256575 /// NM_001256576 /// NM_003633 /// NR_046318 </td> <td> 0007275 // multicellular organismal development // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0010499 // proteasomal ubiquitin-independent protein catabolic process // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from direct assay </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -32.58 </td> <td> 263.54 </td> <td> -0.63 </td> <td> 0.55 </td> <td> 0.62 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201760_s_at </td> <td> 201760_s_at </td> <td> NM_018639 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018639.1 /DEF=Homo sapiens CS box-containing WD protein (LOC55884), mRNA. /FEA=mRNA /GEN=LOC55884 /PROD=CS box-containing WD protein /DB_XREF=gi:8923880 /UG=Hs.136644 CS box-containing WD protein /FL=gb:AF229181.1 gb:AF163324.1 gb:NM_018639.1 </td> <td> NM_018639 </td> <td> WD repeat and SOCS box containing 2 </td> <td> WSB2 </td> <td> 55884 </td> <td> NM_001278557 /// NM_001278558 /// NM_018639 </td> <td> 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 27.23 </td> <td> 541.51 </td> <td> 0.63 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211003_x_at </td> <td> 211003_x_at </td> <td> BC003551 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003551.1 /DEF=Homo sapiens, Similar to transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase), clone MGC:1193, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to transglutaminase 2 (C polypeptide,protein-glutamine-gamma-glutamyltransferase) /DB_XREF=gi:13097680 /UG=Hs.8265 transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) /FL=gb:BC003551.1 </td> <td> BC003551 </td> <td> transglutaminase 2 </td> <td> TGM2 </td> <td> 7052 </td> <td> NM_004613 /// NM_198951 </td> <td> 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0018149 // peptide cross-linking // inferred from electronic annotation /// 0018153 // isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine // inferred from electronic annotation /// 0032471 // negative regulation of endoplasmic reticulum calcium ion concentration // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from sequence or structural similarity /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051482 // positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0051561 // positive regulation of mitochondrial calcium ion concentration // inferred from mutant phenotype /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060662 // salivary gland cavitation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from mutant phenotype /// 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 14.92 </td> <td> 224.99 </td> <td> 0.63 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 213230_at </td> <td> 213230_at </td> <td> AI422335 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI422335 /FEA=EST /DB_XREF=gi:4268266 /DB_XREF=est:tf65f01.x1 /CLONE=IMAGE:2104153 /UG=Hs.78358 paraneoplastic antigen </td> <td> AI422335 </td> <td> cerebellar degeneration-related protein 2-like </td> <td> CDR2L </td> <td> 30850 </td> <td> NM_014603 /// XM_006721852 </td> <td>  </td> <td>  </td> <td>  </td> <td> 13.22 </td> <td> 108.66 </td> <td> 0.63 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200932_s_at </td> <td> 200932_s_at </td> <td> NM_006400 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006400.2 /DEF=Homo sapiens dynactin 2 (p50) (DCTN2), mRNA. /FEA=mRNA /GEN=DCTN2 /PROD=dynactin 2 /DB_XREF=gi:13259506 /UG=Hs.84153 dynactin 2 (p50) /FL=gb:U50733.1 gb:BC000718.1 gb:NM_006400.2 </td> <td> NM_006400 </td> <td> dynactin 2 (p50) </td> <td> DCTN2 </td> <td> 10540 </td> <td> NM_001261412 /// NM_001261413 /// NM_006400 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007052 // mitotic spindle organization // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement </td> <td> 0000776 // kinetochore // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005869 // dynactin complex // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003774 // motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030507 // spectrin binding // inferred from direct assay </td> <td> 14.90 </td> <td> 364.77 </td> <td> 0.63 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 210052_s_at </td> <td> 210052_s_at </td> <td> AF098158 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF098158.1 /DEF=Homo sapiens restricted expressed proliferation associated protein 100 mRNA, complete cds.  /FEA=mRNA /PROD=restricted expressed proliferation associatedprotein 100 /DB_XREF=gi:6073830 /UG=Hs.9329 chromosome 20 open reading frame 1 /FL=gb:NM_012112.1 gb:BC004136.1 gb:AB024704.1 gb:AF146731.1 gb:AF098158.1 gb:AB027467.1 </td> <td> AF098158 </td> <td> TPX2, microtubule-associated </td> <td> TPX2 </td> <td> 22974 </td> <td> NM_012112 /// XM_005260340 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0032147 // activation of protein kinase activity // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0060236 // regulation of mitotic spindle organization // inferred from sequence or structural similarity </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement /// 0005525 // GTP binding // traceable author statement /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> -21.82 </td> <td> 365.16 </td> <td> -0.63 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202424_at </td> <td> 202424_at </td> <td> NM_030662 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030662.1 /DEF=Homo sapiens mitogen-activated protein kinase kinase 2 (MAP2K2), mRNA.  /FEA=mRNA /GEN=MAP2K2 /PROD=mitogen-activated protein kinase kinase 2 /DB_XREF=gi:13489053 /UG=Hs.72241 mitogen-activated protein kinase kinase 2 /FL=gb:BC000471.1 gb:NM_030662.1 </td> <td> NM_030662 </td> <td> mitogen-activated protein kinase kinase 2 </td> <td> MAP2K2 </td> <td> 5605 </td> <td> NM_030662 /// XM_006722799 </td> <td> 0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0032872 // regulation of stress-activated MAPK cascade // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0036289 // peptidyl-serine autophosphorylation // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070371 // ERK1 and ERK2 cascade // traceable author statement /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 0090170 // regulation of Golgi inheritance // traceable author statement /// 2000147 // positive regulation of cell motility // inferred from electronic annotation /// 2000641 // regulation of early endosome to late endosome transport // traceable author statement </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005769 // early endosome // traceable author statement /// 0005770 // late endosome // traceable author statement /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005911 // cell-cell junction // inferred from direct assay /// 0005925 // focal adhesion // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0009898 // cytoplasmic side of plasma membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004708 // MAP kinase kinase activity // inferred from direct assay /// 0004712 // protein serine/threonine/tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from direct assay /// 0032947 // protein complex scaffold // inferred from electronic annotation /// 0043539 // protein serine/threonine kinase activator activity // inferred from direct assay /// 0097110 // scaffold protein binding // inferred from physical interaction </td> <td> 29.17 </td> <td> 353.44 </td> <td> 0.63 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 221484_at </td> <td> 221484_at </td> <td> BF691447 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF691447 /FEA=EST /DB_XREF=gi:11976855 /DB_XREF=est:602247615F1 /CLONE=IMAGE:4332866 /UG=Hs.107526 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 /FL=gb:AB004550.1 gb:AF038663.1 gb:NM_004776.1 </td> <td> BF691447 </td> <td> UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 </td> <td> B4GALT5 </td> <td> 9334 </td> <td> NM_004776 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0018146 // keratan sulfate biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0042339 // keratan sulfate metabolic process // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008378 // galactosyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -29.90 </td> <td> 565.88 </td> <td> -0.62 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 213729_at </td> <td> 213729_at </td> <td> Z78308 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:Z78308 /FEA=EST /DB_XREF=gi:1495081 /DB_XREF=est:HSZ78308 /CLONE=1.47 (CEPH) /UG=Hs.119325 Huntingtin-interacting protein A </td> <td> Z78308 </td> <td> PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) </td> <td> PRPF40A </td> <td> 55660 </td> <td> NM_017892 /// XM_005246676 /// XM_005246677 /// XM_005246678 /// XM_005246679 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from electronic annotation </td> <td> 27.00 </td> <td> 386.73 </td> <td> 0.62 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208899_x_at </td> <td> 208899_x_at </td> <td> AF100741 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF100741.1 /DEF=Homo sapiens vacuolar H-ATPase subunit D mRNA, complete cds. /FEA=mRNA /PROD=vacuolar H-ATPase subunit D /DB_XREF=gi:5138992 /UG=Hs.272630 vacuolar proton pump delta polypeptide /FL=gb:AF104629.1 gb:AF077614.1 gb:BC001411.1 gb:AF145316.1 gb:AF100741.1 gb:NM_015994.1 </td> <td> AF100741 </td> <td> ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D </td> <td> ATP6V1D </td> <td> 51382 </td> <td> NM_015994 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0061512 // protein localization to cilium // inferred from mutant phenotype /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005929 // cilium // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation </td> <td> 17.48 </td> <td> 318.59 </td> <td> 0.62 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208696_at </td> <td> 208696_at </td> <td> AF275798 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF275798.1 /DEF=Homo sapiens PNAS-102 mRNA, complete cds. /FEA=mRNA /PROD=PNAS-102 /DB_XREF=gi:10834761 /UG=Hs.1600 chaperonin containing TCP1, subunit 5 (epsilon) /FL=gb:AF275798.1 </td> <td> AF275798 </td> <td> chaperonin containing TCP1, subunit 5 (epsilon) </td> <td> CCT5 </td> <td> 22948 </td> <td> NM_012073 </td> <td> 0006457 // protein folding // traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0002199 // zona pellucida receptor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0044297 // cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0031681 // G-protein beta-subunit binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -31.57 </td> <td> 703.39 </td> <td> -0.62 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211058_x_at </td> <td> 211058_x_at </td> <td> BC006379 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006379.1 /DEF=Homo sapiens, tubulin alpha 1, clone MGC:12832, mRNA, complete cds. /FEA=mRNA /PROD=tubulin alpha 1 /DB_XREF=gi:13623540 /FL=gb:BC006379.1 </td> <td> BC006379 </td> <td> tubulin, alpha 1b </td> <td> TUBA1B </td> <td> 10376 </td> <td> NM_006082 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // traceable author statement /// 0030705 // cytoskeleton-dependent intracellular transport // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051301 // cell division // traceable author statement /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> -383.40 </td> <td> 4404.40 </td> <td> -0.62 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201308_s_at </td> <td> 201308_s_at </td> <td> NM_018243 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018243.1 /DEF=Homo sapiens hypothetical protein FLJ10849 (FLJ10849), mRNA. /FEA=mRNA /GEN=FLJ10849 /PROD=hypothetical protein FLJ10849 /DB_XREF=gi:8922711 /UG=Hs.8768 hypothetical protein FLJ10849 /FL=gb:NM_018243.1 </td> <td> NM_018243 </td> <td> septin 11 </td> <td> SEPT11 </td> <td> 55752 </td> <td> NM_018243 /// XM_005263120 /// XM_005263121 /// XM_005263122 /// XM_006714259 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> -13.22 </td> <td> 113.36 </td> <td> -0.62 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201624_at </td> <td> 201624_at </td> <td> NM_001349 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001349.1 /DEF=Homo sapiens aspartyl-tRNA synthetase (DARS), mRNA. /FEA=mRNA /GEN=DARS /PROD=aspartyl-tRNA synthetase /DB_XREF=gi:4557512 /UG=Hs.80758 aspartyl-tRNA synthetase /FL=gb:BC000629.1 gb:J05032.1 gb:NM_001349.1 </td> <td> NM_001349 </td> <td> aspartyl-tRNA synthetase </td> <td> DARS </td> <td> 1615 </td> <td> NM_001293312 /// NM_001349 </td> <td> 0006412 // translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006422 // aspartyl-tRNA aminoacylation // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004046 // aminoacylase activity // traceable author statement /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004815 // aspartate-tRNA ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -10.35 </td> <td> 98.38 </td> <td> -0.62 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211921_x_at </td> <td> 211921_x_at </td> <td> AF348514 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF348514.1 /DEF=Homo sapiens fetal thymus prothymosin alpha mRNA, complete cds. /FEA=CDS /PROD=prothymosin alpha /DB_XREF=gi:13560658 /FL=gb:AF348514.1 </td> <td> AF348514 </td> <td> prothymosin alpha-like /// prothymosin alpha-like /// microRNA 1244-1 /// microRNA 1244-2 /// microRNA 1244-3 /// prothymosin, alpha </td> <td> LOC100506248 /// LOC728026 /// MIR1244-1 /// MIR1244-2 /// MIR1244-3 /// PTMA </td> <td> 5757 /// 728026 /// 100302285 /// 100422872 /// 100422885 /// 100506248 </td> <td> NM_001099285 /// NM_002823 /// NR_036052 /// NR_036262 /// NR_036263 /// XM_001126659 /// XM_003960458 /// XM_005275719 /// XM_005276418 </td> <td> 0006351 // transcription, DNA-templated // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> -70.97 </td> <td> 1801.21 </td> <td> -0.62 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 204361_s_at </td> <td> 204361_s_at </td> <td> AB014486 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB014486.1 /DEF=Homo sapiens mRNA for RA70, complete cds. /FEA=mRNA /GEN=RA70 /PROD=RA70 /DB_XREF=gi:4062959 /UG=Hs.52644 SKAP55 homologue /FL=gb:BC002893.1 gb:AF072166.1 gb:AB014486.1 gb:AF051323.1 gb:NM_003930.1 </td> <td> AB014486 </td> <td> src kinase associated phosphoprotein 2 </td> <td> SKAP2 </td> <td> 8935 </td> <td> NM_003930 /// XM_005249901 </td> <td> 0006461 // protein complex assembly // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // traceable author statement /// 0042113 // B cell activation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> 8.05 </td> <td> 48.23 </td> <td> 0.62 </td> <td> 0.55 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202157_s_at </td> <td> 202157_s_at </td> <td> U69546 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U69546.1 /DEF=Homo sapiens RNA-binding protein BRUNOL3 (BRUNOL3) mRNA, complete cds.  /FEA=mRNA /GEN=BRUNOL3 /PROD=RNA-binding protein BRUNOL3 /DB_XREF=gi:1568642 /UG=Hs.211610 CUG triplet repeat, RNA-binding protein 2 /FL=gb:U69546.1 gb:AF036956.1 gb:AF090694.1 gb:NM_006561.1 </td> <td> U69546 </td> <td> CUGBP, Elav-like family member 2 </td> <td> CELF2 </td> <td> 10659 </td> <td> NM_001025076 /// NM_001025077 /// NM_001083591 /// NM_006561 /// XM_005252348 /// XM_005252349 /// XM_005252351 /// XM_005252354 /// XM_005252357 /// XM_005252358 /// XM_006717365 /// XM_006717366 /// XM_006717367 /// XM_006717368 /// XM_006717369 /// XM_006717370 /// XM_006717371 /// XM_006717372 /// XM_006717373 /// XM_006717374 /// XM_006717375 </td> <td> 0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008016 // regulation of heart contraction // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -15.62 </td> <td> 369.56 </td> <td> -0.62 </td> <td> 0.56 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202277_at </td> <td> 202277_at </td> <td> AL568804 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL568804 /FEA=EST /DB_XREF=gi:12923509 /DB_XREF=est:AL568804 /CLONE=CS0DE005YN15 (3 prime) /UG=Hs.90458 serine palmitoyltransferase, long chain base subunit 1 /FL=gb:NM_006415.1 </td> <td> AL568804 </td> <td> serine palmitoyltransferase, long chain base subunit 1 </td> <td> SPTLC1 </td> <td> 10558 </td> <td> NM_001281303 /// NM_006415 /// NM_178324 /// XR_242563 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006686 // sphingomyelin biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046511 // sphinganine biosynthetic process // inferred from electronic annotation /// 0046512 // sphingosine biosynthetic process // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0017059 // serine C-palmitoyltransferase complex // inferred from direct assay /// 0035339 // SPOTS complex // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation </td> <td> 13.90 </td> <td> 430.77 </td> <td> 0.62 </td> <td> 0.56 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208945_s_at </td> <td> 208945_s_at </td> <td> NM_003766 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_003766.1 /DEF=Homo sapiens beclin 1 (coiled-coil, myosin-like BCL2-interacting protein) (BECN1), mRNA.  /FEA=CDS /GEN=BECN1 /PROD=beclin 1 (coiled-coil, myosin-likeBCL2-interacting protein) /DB_XREF=gi:4502394 /UG=Hs.12272 beclin 1 (coiled-coil, myosin-like BCL2-interacting protein) /FL=gb:AF077301.1 gb:NM_003766.1 gb:AF139131.1 </td> <td> NM_003766 </td> <td> beclin 1, autophagy related </td> <td> BECN1 </td> <td> 8678 </td> <td> NM_003766 /// XM_005257758 /// XM_005257759 /// XM_005257760 </td> <td> 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016239 // positive regulation of macroautophagy // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0048666 // neuron development // inferred from electronic annotation /// 0050435 // beta-amyloid metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0051707 // response to other organism // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0071275 // cellular response to aluminum ion // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -9.05 </td> <td> 128.85 </td> <td> -0.62 </td> <td> 0.56 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218288_s_at </td> <td> 218288_s_at </td> <td> NM_021825 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021825.1 /DEF=Homo sapiens hypothetical protein MDS025 (MDS025), mRNA. /FEA=mRNA /GEN=MDS025 /PROD=hypothetical protein MDS025 /DB_XREF=gi:11141900 /UG=Hs.154938 hypothetical protein MDS025 /FL=gb:AF182412.1 gb:AF182424.1 gb:NM_021825.1 gb:AF271782.1 gb:AL136791.1 </td> <td> NM_021825 </td> <td> coiled-coil domain containing 90B </td> <td> CCDC90B </td> <td> 60492 </td> <td> NM_001286116 /// NM_001286117 /// NM_001286118 /// NM_001286119 /// NM_001286120 /// NM_021825 /// XM_005274152 /// XM_005274154 /// XM_005274156 /// XM_005274159 /// XM_006718654 </td> <td>  </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -22.40 </td> <td> 419.68 </td> <td> -0.62 </td> <td> 0.56 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217900_at </td> <td> 217900_at </td> <td> NM_018060 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018060.1 /DEF=Homo sapiens hypothetical protein FLJ10326 (FLJ10326), mRNA. /FEA=mRNA /GEN=FLJ10326 /PROD=hypothetical protein FLJ10326 /DB_XREF=gi:8922355 /UG=Hs.262823 hypothetical protein FLJ10326 /FL=gb:NM_018060.1 </td> <td> NM_018060 </td> <td> isoleucyl-tRNA synthetase 2, mitochondrial </td> <td> IARS2 </td> <td> 55699 </td> <td> NM_018060 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006428 // isoleucyl-tRNA aminoacylation // inferred from electronic annotation /// 0006450 // regulation of translational fidelity // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0002161 // aminoacyl-tRNA editing activity // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004822 // isoleucine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -16.55 </td> <td> 318.85 </td> <td> -0.62 </td> <td> 0.56 </td> <td> 0.63 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216693_x_at </td> <td> 216693_x_at </td> <td> AL133102 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL133102.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434C1722 (from clone DKFZp434C1722). /FEA=mRNA /DB_XREF=gi:6453585 /UG=Hs.127842 CGI-142 </td> <td> AL133102 </td> <td> hepatoma-derived growth factor, related protein 3 </td> <td> HDGFRP3 </td> <td> 50810 </td> <td> NM_016073 /// XM_006720554 </td> <td> 0008283 // cell proliferation // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0008083 // growth factor activity // inferred from electronic annotation </td> <td> -28.85 </td> <td> 432.00 </td> <td> -0.61 </td> <td> 0.56 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202131_s_at </td> <td> 202131_s_at </td> <td> NM_003831 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003831.1 /DEF=Homo sapiens sudD (suppressor of bimD6, Aspergillus nidulans) homolog (SUDD), mRNA.  /FEA=mRNA /GEN=SUDD /PROD=sudD (suppressor of bimD6, Aspergillus nidulans)homolog /DB_XREF=gi:4507298 /UG=Hs.209061 sudD (suppressor of bimD6, Aspergillus nidulans) homolog /FL=gb:AF013591.1 gb:NM_003831.1 </td> <td> NM_003831 </td> <td> RIO kinase 3 </td> <td> RIOK3 </td> <td> 8780 </td> <td> NM_003831 /// NM_145906 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007059 // chromosome segregation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation </td> <td> -17.45 </td> <td> 123.42 </td> <td> -0.61 </td> <td> 0.56 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 219933_at </td> <td> 219933_at </td> <td> NM_016066 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016066.1 /DEF=Homo sapiens CGI-133 protein (LOC51022), mRNA. /FEA=mRNA /GEN=LOC51022 /PROD=CGI-133 protein /DB_XREF=gi:7705627 /UG=Hs.5054 CGI-133 protein /FL=gb:AF151891.1 gb:NM_016066.1 gb:AF132495.2 </td> <td> NM_016066 </td> <td> glutaredoxin 2 </td> <td> GLRX2 </td> <td> 51022 </td> <td> NM_001243399 /// NM_016066 /// NM_197962 /// XM_005245231 </td> <td> 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006749 // glutathione metabolic process // traceable author statement /// 0006915 // apoptotic process // non-traceable author statement /// 0009266 // response to temperature stimulus // non-traceable author statement /// 0009966 // regulation of signal transduction // non-traceable author statement /// 0010033 // response to organic substance // inferred from direct assay /// 0030154 // cell differentiation // non-traceable author statement /// 0042262 // DNA protection // non-traceable author statement /// 0042542 // response to hydrogen peroxide // inferred from direct assay /// 0045454 // cell redox homeostasis // traceable author statement /// 0051775 // response to redox state // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0003756 // protein disulfide isomerase activity // traceable author statement /// 0008794 // arsenate reductase (glutaredoxin) activity // traceable author statement /// 0009055 // electron carrier activity // non-traceable author statement /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015038 // glutathione disulfide oxidoreductase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation </td> <td> -11.32 </td> <td> 226.01 </td> <td> -0.61 </td> <td> 0.56 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218134_s_at </td> <td> 218134_s_at </td> <td> NM_018047 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018047.1 /DEF=Homo sapiens hypothetical protein FLJ10290 (FLJ10290), mRNA. /FEA=mRNA /GEN=FLJ10290 /PROD=hypothetical protein FLJ10290 /DB_XREF=gi:8922327 /UG=Hs.25516 hypothetical protein FLJ10290 /FL=gb:AL136933.1 gb:BC003402.1 gb:NM_018047.1 </td> <td> NM_018047 </td> <td> RNA binding motif protein 22 </td> <td> RBM22 </td> <td> 55696 </td> <td> NM_018047 /// XM_005268479 </td> <td> 0000060 // protein import into nucleus, translocation // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0033120 // positive regulation of RNA splicing // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0045292 // mRNA cis splicing, via spliceosome // inferred from direct assay /// 0090316 // positive regulation of intracellular protein transport // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005487 // nucleocytoplasmic transporter activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017069 // snRNA binding // inferred from direct assay /// 0036002 // pre-mRNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from physical interaction </td> <td> 9.15 </td> <td> 139.28 </td> <td> 0.61 </td> <td> 0.56 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 207830_s_at </td> <td> 207830_s_at </td> <td> NM_002713 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002713.1 /DEF=Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 8 (PPP1R8), mRNA.  /FEA=mRNA /GEN=PPP1R8 /PROD=protein phosphatase 1, regulatory (inhibitor)subunit 8 /DB_XREF=gi:4506014 /UG=Hs.78961 protein phosphatase 1, regulatory (inhibitor) subunit 8 /FL=gb:NM_002713.1 gb:U14575.1 </td> <td> NM_002713 </td> <td> protein phosphatase 1, regulatory subunit 8 </td> <td> PPP1R8 </td> <td> 5511 </td> <td> NM_002713 /// NM_014110 /// NM_138558 /// XM_006710723 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006401 // RNA catabolic process // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 0090501 // RNA phosphodiester bond hydrolysis // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0004865 // protein serine/threonine phosphatase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008599 // protein phosphatase type 1 regulator activity // inferred from electronic annotation /// 0008995 // ribonuclease E activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 19.92 </td> <td> 236.24 </td> <td> 0.61 </td> <td> 0.56 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 219336_s_at </td> <td> 219336_s_at </td> <td> NM_015947 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015947.1 /DEF=Homo sapiens CGI-18 protein (LOC51008), mRNA. /FEA=mRNA /GEN=LOC51008 /PROD=CGI-18 protein /DB_XREF=gi:7705601 /UG=Hs.121599 CGI-18 protein /FL=gb:AY013290.1 gb:AF132952.1 gb:NM_015947.1 </td> <td> NM_015947 </td> <td> activating signal cointegrator 1 complex subunit 1 </td> <td> ASCC1 </td> <td> 51008 </td> <td> NM_001198798 /// NM_001198799 /// NM_001198800 /// NM_015947 /// NR_045564 /// XM_005269878 /// XM_006717872 /// XM_006717873 /// XM_006717874 /// XM_006717875 /// XM_006717876 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation </td> <td> 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation </td> <td> -16.10 </td> <td> 101.78 </td> <td> -0.61 </td> <td> 0.56 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208653_s_at </td> <td> 208653_s_at </td> <td> AF263279 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF263279.1 /DEF=Homo sapiens CD164 mRNA, complete cds. /FEA=CDS /PROD=CD164 /DB_XREF=gi:9230740 /UG=Hs.43910 CD164 antigen, sialomucin /FL=gb:AF299341.1 gb:AF299343.1 gb:AF263279.1 </td> <td> AF263279 </td> <td> CD164 molecule, sialomucin </td> <td> CD164 </td> <td> 8763 </td> <td> NM_001142401 /// NM_001142402 /// NM_001142403 /// NM_001142404 /// NM_006016 </td> <td> 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007157 // heterophilic cell-cell adhesion // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0030097 // hemopoiesis // non-traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 16.68 </td> <td> 165.81 </td> <td> 0.61 </td> <td> 0.56 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217025_s_at </td> <td> 217025_s_at </td> <td> AL110225 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL110225.1 /DEF=Homo sapiens mRNA; cDNA DKFZp434D064 (from clone DKFZp434D064); partial cds.  /FEA=mRNA /GEN=DKFZp434D064 /PROD=hypothetical protein /DB_XREF=gi:5817161 /UG=Hs.89434 drebrin 1 </td> <td> AL110225 </td> <td> drebrin 1 </td> <td> DBN1 </td> <td> 1627 </td> <td> NM_004395 /// NM_080881 /// XM_005265827 /// XM_005265828 /// XM_005265829 /// XM_006714826 </td> <td> 0007015 // actin filament organization // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0010643 // cell communication by chemical coupling // inferred from electronic annotation /// 0010644 // cell communication by electrical coupling // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032507 // maintenance of protein location in cell // inferred from electronic annotation /// 0048168 // regulation of neuronal synaptic plasticity // non-traceable author statement /// 0048699 // generation of neurons // inferred from electronic annotation /// 0050773 // regulation of dendrite development // non-traceable author statement /// 0061351 // neural precursor cell proliferation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // non-traceable author statement /// 0042641 // actomyosin // non-traceable author statement </td> <td> 0003779 // actin binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005522 // profilin binding // inferred from sequence or structural similarity </td> <td> 23.63 </td> <td> 246.04 </td> <td> 0.61 </td> <td> 0.56 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 221501_x_at </td> <td> 221501_x_at </td> <td> AF229069 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF229069.1 /DEF=Homo sapiens KIAA0220-like protein mRNA, complete cds. /FEA=mRNA /PROD=KIAA0220-like protein /DB_XREF=gi:8980670 /UG=Hs.251928 nuclear pore complex interacting protein /FL=gb:AF229069.1 </td> <td> AF229069 </td> <td> polycystin-1-like /// nuclear pore complex interacting protein family, member A1 /// nuclear pore complex interacting protein family, member A2 /// nuclear pore complex interacting protein family, member A3 /// nuclear pore complex interacting protein family, member A5 /// nuclear pore complex interacting protein family, member A7 /// nuclear pore complex interacting protein family, member A8 /// polycystic kidney disease 1 (autosomal dominant) pseudogene 1 </td> <td> LOC101930075 /// NPIPA1 /// NPIPA2 /// NPIPA3 /// NPIPA5 /// NPIPA7 /// NPIPA8 /// PKD1P1 </td> <td> 9284 /// 339044 /// 642778 /// 642799 /// 100288332 /// 101059938 /// 101059953 /// 101930075 </td> <td> NM_001277323 /// NM_001277324 /// NM_001277325 /// NM_001282507 /// NM_001282511 /// NM_006985 /// NR_036447 /// XM_005255019 /// XM_005255020 /// XM_005255021 /// XM_005255024 /// XM_005255484 /// XM_005255485 /// XM_005255486 /// XM_005255487 /// XM_005255488 /// XM_005255489 /// XM_005255490 /// XM_005255491 /// XM_005255492 /// XM_005255694 /// XM_005255695 /// XM_005255735 /// XM_005255737 /// XM_005255738 /// XM_005276493 /// XM_006720823 /// XM_006720824 /// XM_006720825 /// XM_006720826 /// XM_006720827 /// XM_006720828 /// XM_006720829 /// XM_006720830 /// XM_006720916 /// XM_006720917 /// XM_006720979 /// XM_006720980 /// XM_006725185 /// XM_006725186 /// XM_006725187 /// XM_006725188 /// XM_006725189 /// XM_006725190 /// XM_006725191 /// XM_006725205 /// XM_006725206 /// XM_006725207 /// XM_006725208 /// XM_006725209 /// XM_006725210 /// XM_006725211 /// XM_006725212 /// XM_006725213 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td>  </td> <td> 38.05 </td> <td> 378.50 </td> <td> 0.60 </td> <td> 0.56 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208800_at </td> <td> 208800_at </td> <td> AV702627 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV702627 /FEA=EST /DB_XREF=gi:10718957 /DB_XREF=est:AV702627 /CLONE=ADBAHC04 /UG=Hs.237825 signal recognition particle 72kD /FL=gb:AF069765.1 gb:AF077019.1 gb:NM_006947.1 </td> <td> AV702627 </td> <td> signal recognition particle 72kDa </td> <td> SRP72 </td> <td> 6731 </td> <td> NM_001267722 /// NM_006947 /// XM_005265765 </td> <td> 0006412 // translation // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042493 // response to drug // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005786 // signal recognition particle, endoplasmic reticulum targeting // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0048500 // signal recognition particle // inferred from electronic annotation </td> <td> 0005047 // signal recognition particle binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0008312 // 7S RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 24.60 </td> <td> 300.70 </td> <td> 0.60 </td> <td> 0.56 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217819_at </td> <td> 217819_at </td> <td> NM_016099 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016099.1 /DEF=Homo sapiens HSPC041 protein (LOC51125), mRNA. /FEA=mRNA /GEN=LOC51125 /PROD=HSPC041 protein /DB_XREF=gi:7705820 /UG=Hs.7953 HSPC041 protein /FL=gb:AF125102.1 gb:NM_016099.1 </td> <td> NM_016099 </td> <td> golgin A7 </td> <td> GOLGA7 </td> <td> 51125 </td> <td> NM_001002296 /// NM_001174124 /// NM_016099 </td> <td> 0018230 // peptidyl-L-cysteine S-palmitoylation // inferred from direct assay /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay /// 0050821 // protein stabilization // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0002178 // palmitoyltransferase complex // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031228 // intrinsic component of Golgi membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 12.62 </td> <td> 401.61 </td> <td> 0.60 </td> <td> 0.56 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 221791_s_at </td> <td> 221791_s_at </td> <td> BG167522 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG167522 /FEA=EST /DB_XREF=gi:12674151 /DB_XREF=est:602342728F1 /CLONE=IMAGE:4452895 /UG=Hs.171774 hypothetical protein </td> <td> BG167522 </td> <td> translation machinery associated 7 homolog (S. cerevisiae) </td> <td> TMA7 </td> <td> 51372 </td> <td> NM_015933 </td> <td>  </td> <td>  </td> <td>  </td> <td> 64.75 </td> <td> 1903.30 </td> <td> 0.60 </td> <td> 0.57 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218995_s_at </td> <td> 218995_s_at </td> <td> NM_001955 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001955.1 /DEF=Homo sapiens endothelin 1 (EDN1), mRNA. /FEA=mRNA /GEN=EDN1 /PROD=endothelin 1 /DB_XREF=gi:4503460 /UG=Hs.2271 endothelin 1 /FL=gb:NM_001955.1 </td> <td> NM_001955 </td> <td> endothelin 1 </td> <td> EDN1 </td> <td> 1906 </td> <td> NM_001168319 /// NM_001955 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001516 // prostaglandin biosynthetic process // inferred from direct assay /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001821 // histamine secretion // inferred from electronic annotation /// 0003100 // regulation of systemic arterial blood pressure by endothelin // inferred from direct assay /// 0006885 // regulation of pH // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007204 // positive regulation of cytosolic calcium ion concentration // inferred from direct assay /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007507 // heart development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0010460 // positive regulation of heart rate // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from direct assay /// 0010870 // positive regulation of receptor biosynthetic process // inferred from direct assay /// 0014032 // neural crest cell development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase signaling // inferred from direct assay /// 0014824 // artery smooth muscle contraction // inferred from direct assay /// 0014824 // artery smooth muscle contraction // traceable author statement /// 0014826 // vein smooth muscle contraction // inferred from direct assay /// 0015758 // glucose transport // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0019229 // regulation of vasoconstriction // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from direct assay /// 0030072 // peptide hormone secretion // inferred from direct assay /// 0030185 // nitric oxide transport // inferred from direct assay /// 0030195 // negative regulation of blood coagulation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from direct assay /// 0030818 // negative regulation of cAMP biosynthetic process // inferred from electronic annotation /// 0031583 // phospholipase D-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0032269 // negative regulation of cellular protein metabolic process // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033574 // response to testosterone // inferred from electronic annotation /// 0034392 // negative regulation of smooth muscle cell apoptotic process // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from electronic annotation /// 0035815 // positive regulation of renal sodium excretion // inferred from electronic annotation /// 0042045 // epithelial fluid transport // inferred from electronic annotation /// 0042310 // vasoconstriction // inferred from direct assay /// 0042313 // protein kinase C deactivation // inferred from direct assay /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0042482 // positive regulation of odontogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0043179 // rhythmic excitation // inferred from electronic annotation /// 0043200 // response to amino acid // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0045321 // leukocyte activation // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // traceable author statement /// 0045793 // positive regulation of cell size // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from direct assay /// 0046888 // negative regulation of hormone secretion // inferred from electronic annotation /// 0048016 // inositol phosphate-mediated signaling // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0051482 // positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0051771 // negative regulation of nitric-oxide synthase biosynthetic process // inferred from direct assay /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0051930 // regulation of sensory perception of pain // inferred from electronic annotation /// 0060137 // maternal process involved in parturition // inferred from electronic annotation /// 0060298 // positive regulation of sarcomere organization // inferred from mutant phenotype /// 0060585 // positive regulation of prostaglandin-endoperoxide synthase activity // inferred from mutant phenotype /// 0070101 // positive regulation of chemokine-mediated signaling pathway // inferred by curator /// 0071347 // cellular response to interleukin-1 // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005179 // hormone activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0031707 // endothelin A receptor binding // inferred from direct assay /// 0031708 // endothelin B receptor binding // inferred from direct assay </td> <td> -71.78 </td> <td> 1675.71 </td> <td> -0.60 </td> <td> 0.57 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202974_at </td> <td> 202974_at </td> <td> NM_002436 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002436.2 /DEF=Homo sapiens membrane protein, palmitoylated 1 (55kD) (MPP1), mRNA. /FEA=mRNA /GEN=MPP1 /PROD=palmitoylated membrane protein 1 /DB_XREF=gi:6006024 /UG=Hs.1861 membrane protein, palmitoylated 1 (55kD) /FL=gb:BC002392.1 gb:M64925.1 gb:NM_002436.2 </td> <td> NM_002436 </td> <td> membrane protein, palmitoylated 1, 55kDa </td> <td> MPP1 </td> <td> 4354 </td> <td> NM_001166460 /// NM_001166461 /// NM_001166462 /// NM_002436 </td> <td> 0007165 // signal transduction // traceable author statement /// 0046939 // nucleotide phosphorylation // traceable author statement /// 0090022 // regulation of neutrophil chemotaxis // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0032420 // stereocilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0004385 // guanylate kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 11.50 </td> <td> 137.07 </td> <td> 0.60 </td> <td> 0.57 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209316_s_at </td> <td> 209316_s_at </td> <td> BC001465 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001465.1 /DEF=Homo sapiens, HBS1 (S. cerevisiae)-like, clone MGC:1869, mRNA, complete cds.  /FEA=mRNA /PROD=HBS1 (S. cerevisiae)-like /DB_XREF=gi:12655212 /UG=Hs.221040 HBS1 (S. cerevisiae)-like /FL=gb:BC001465.1 gb:U87791.1 gb:NM_006620.1 </td> <td> BC001465 </td> <td> HBS1-like translational GTPase </td> <td> HBS1L </td> <td> 10767 </td> <td> NM_001145158 /// NM_001145207 /// NM_006620 /// XM_006715320 /// XR_245499 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement </td> <td> 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> -11.00 </td> <td> 303.12 </td> <td> -0.60 </td> <td> 0.57 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218871_x_at </td> <td> 218871_x_at </td> <td> NM_018590 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018590.1 /DEF=Homo sapiens hypothetical protein PRO0082 (PRO0082), mRNA. /FEA=mRNA /GEN=PRO0082 /PROD=hypothetical protein PRO0082 /DB_XREF=gi:8923965 /UG=Hs.180758 hypothetical protein PRO0082 /FL=gb:AF116646.1 gb:NM_018590.1 </td> <td> NM_018590 </td> <td> chondroitin sulfate N-acetylgalactosaminyltransferase 2 </td> <td> CSGALNACT2 </td> <td> 55454 </td> <td> NM_018590 /// XM_005271819 /// XM_005271820 /// XM_005271821 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0030166 // proteoglycan biosynthetic process // inferred from direct assay /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050650 // chondroitin sulfate proteoglycan biosynthetic process // inferred from direct assay /// 0050651 // dermatan sulfate proteoglycan biosynthetic process // inferred from direct assay /// 0050652 // dermatan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process // traceable author statement /// 0050653 // chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process // traceable author statement </td> <td> 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030173 // integral component of Golgi membrane // non-traceable author statement /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation </td> <td> 0008376 // acetylgalactosaminyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047237 // glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity // inferred from electronic annotation </td> <td> 9.70 </td> <td> 106.60 </td> <td> 0.60 </td> <td> 0.57 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211948_x_at </td> <td> 211948_x_at </td> <td> BG261071 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG261071 /FEA=EST /DB_XREF=gi:12770887 /DB_XREF=est:602372693F1 /CLONE=IMAGE:4480631 /UG=Hs.69559 KIAA1096 protein </td> <td> BG261071 </td> <td> proline-rich coiled-coil 2C </td> <td> PRRC2C </td> <td> 23215 </td> <td> NM_015172 /// XM_005245015 /// XM_005245016 /// XM_005245017 /// XM_005245018 /// XM_005245019 /// XM_005245020 /// XM_005245022 /// XM_005245023 /// XM_005245024 /// XM_005245025 /// XM_005245026 /// XM_005245027 /// XM_005245028 /// XM_005245029 /// XM_005245030 /// XM_006711238 /// XM_006711239 </td> <td>  </td> <td> 0016020 // membrane // inferred from direct assay </td> <td> 0008022 // protein C-terminus binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 12.60 </td> <td> 232.80 </td> <td> 0.60 </td> <td> 0.57 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201725_at </td> <td> 201725_at </td> <td> NM_006023 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006023.1 /DEF=Homo sapiens D123 gene product (D123), mRNA. /FEA=mRNA /GEN=D123 /PROD=D123 gene product /DB_XREF=gi:5174422 /UG=Hs.82043 D123 gene product /FL=gb:BC001600.1 gb:D14878.1 gb:U27112.1 gb:NM_006023.1 </td> <td> NM_006023 </td> <td> cell division cycle 123 </td> <td> CDC123 </td> <td> 8872 </td> <td> NM_006023 /// XM_005252638 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007346 // regulation of mitotic cell cycle // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay </td> <td>  </td> <td> 28.32 </td> <td> 414.76 </td> <td> 0.60 </td> <td> 0.57 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 221830_at </td> <td> 221830_at </td> <td> AI302106 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI302106 /FEA=EST /DB_XREF=gi:3961452 /DB_XREF=est:qn57h10.x1 /CLONE=IMAGE:1902403 /UG=Hs.301746 RAP2A, member of RAS oncogene family /FL=gb:NM_021033.1 </td> <td> AI302106 </td> <td> RAP2A, member of RAS oncogene family </td> <td> RAP2A </td> <td> 5911 </td> <td> NM_021033 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032486 // Rap protein signal transduction // inferred from sequence or structural similarity /// 0034613 // cellular protein localization // inferred from direct assay /// 0045184 // establishment of protein localization // inferred from direct assay /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0048814 // regulation of dendrite morphogenesis // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 22.45 </td> <td> 220.62 </td> <td> 0.60 </td> <td> 0.57 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211300_s_at </td> <td> 211300_s_at </td> <td> K03199 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:K03199.1 /DEF=Human p53 cellular tumor antigen mRNA, complete cds. /FEA=mRNA /GEN=TP53 /DB_XREF=gi:189478 /UG=Hs.1846 tumor protein p53 (Li-Fraumeni syndrome) /FL=gb:K03199.1 </td> <td> K03199 </td> <td> tumor protein p53 </td> <td> TP53 </td> <td> 7157 </td> <td> NM_000546 /// NM_001126112 /// NM_001126113 /// NM_001126114 /// NM_001126115 /// NM_001126116 /// NM_001126117 /// NM_001126118 /// NM_001276695 /// NM_001276696 /// NM_001276697 /// NM_001276698 /// NM_001276699 /// NM_001276760 /// NM_001276761 </td> <td> 0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000733 // DNA strand renaturation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0002931 // response to ischemia // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from mutant phenotype /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from mutant phenotype /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0006983 // ER overload response // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0007275 // multicellular organismal development // inferred from mutant phenotype /// 0007369 // gastrulation // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007569 // cell aging // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from direct assay /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008340 // determination of adult lifespan // inferred from sequence or structural similarity /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0009651 // response to salt stress // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010165 // response to X-ray // not recorded /// 0010332 // response to gamma radiation // inferred from mutant phenotype /// 0010666 // positive regulation of cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0012501 // programmed cell death // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // not recorded /// 0031497 // chromatin assembly // inferred from direct assay /// 0031571 // mitotic G1 DNA damage checkpoint // inferred from mutant phenotype /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0034103 // regulation of tissue remodeling // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034644 // cellular response to UV // not recorded /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // not recorded /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046677 // response to antibiotic // inferred from expression pattern /// 0046902 // regulation of mitochondrial membrane permeability // traceable author statement /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0051097 // negative regulation of helicase activity // traceable author statement /// 0051262 // protein tetramerization // traceable author statement /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0070243 // regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from sequence or structural similarity /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 0071850 // mitotic cell cycle arrest // inferred from electronic annotation /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0090343 // positive regulation of cell aging // inferred from electronic annotation /// 0090399 // replicative senescence // inferred from mutant phenotype /// 0090403 // oxidative stress-induced premature senescence // inferred from mutant phenotype /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 0097252 // oligodendrocyte apoptotic process // inferred from direct assay /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement /// 1901525 // negative regulation of macromitophagy // inferred from electronic annotation /// 1902108 // regulation of mitochondrial membrane permeability involved in apoptotic process // inferred from electronic annotation /// 2000378 // negative regulation of reactive oxygen species metabolic process // inferred from electronic annotation /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0000785 // chromatin // not recorded /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // not recorded /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016604 // nuclear body // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001228 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0002020 // protease binding // inferred from physical interaction /// 0002039 // p53 binding // not recorded /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003682 // chromatin binding // inferred from direct assay /// 0003684 // damaged DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005507 // copper ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035033 // histone deacetylase regulator activity // inferred from electronic annotation /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from physical interaction /// 0097371 // MDM2/MDM4 family protein binding // inferred from electronic annotation </td> <td> -9.78 </td> <td> 109.54 </td> <td> -0.60 </td> <td> 0.57 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208775_at </td> <td> 208775_at </td> <td> D89729 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D89729.1 /DEF=Homo sapiens mRNA for CRM1 protein, complete cds. /FEA=mRNA /PROD=CRM1 protein /DB_XREF=gi:2626839 /UG=Hs.79090 exportin 1 (CRM1, yeast, homolog) /FL=gb:D89729.1 gb:NM_003400.2 </td> <td> D89729 </td> <td> exportin 1 </td> <td> XPO1 </td> <td> 7514 </td> <td> NM_003400 /// XM_005264544 /// XM_005264546 /// XM_006712094 /// XM_006712095 /// XM_006712096 /// XM_006712097 </td> <td> 0000055 // ribosomal large subunit export from nucleus // inferred from mutant phenotype /// 0000056 // ribosomal small subunit export from nucleus // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0006611 // protein export from nucleus // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010824 // regulation of centrosome duplication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0046825 // regulation of protein export from nucleus // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005642 // annulate lamellae // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0015030 // Cajal body // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005487 // nucleocytoplasmic transporter activity // inferred from mutant phenotype /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 41.53 </td> <td> 708.61 </td> <td> 0.59 </td> <td> 0.57 </td> <td> 0.64 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218329_at </td> <td> 218329_at </td> <td> NM_012406 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012406.2 /DEF=Homo sapiens PR domain containing 4 (PRDM4), mRNA. /FEA=mRNA /GEN=PRDM4 /PROD=PR domain containing 4 /DB_XREF=gi:9055315 /UG=Hs.21807 PR domain containing 4 /FL=gb:AF144757.2 gb:NM_012406.2 </td> <td> NM_012406 </td> <td> PR domain containing 4 </td> <td> PRDM4 </td> <td> 11108 </td> <td> NM_012406 /// XM_005268593 /// XM_006719205 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 16.13 </td> <td> 135.31 </td> <td> 0.59 </td> <td> 0.57 </td> <td> 0.65 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209186_at </td> <td> 209186_at </td> <td> M23114 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M23114.1 /DEF=Homo sapiens calcium-ATPase (HK1) mRNA, complete cds. /FEA=mRNA /GEN=HK1 /DB_XREF=gi:184100 /UG=Hs.1526 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 /FL=gb:M23114.1 </td> <td> M23114 </td> <td> ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 </td> <td> ATP2A2 </td> <td> 488 </td> <td> NM_001135765 /// NM_001681 /// NM_170665 /// XM_005253888 /// XR_243009 </td> <td> 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // traceable author statement /// 0006984 // ER-nucleus signaling pathway // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0010460 // positive regulation of heart rate // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0045822 // negative regulation of heart contraction // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055119 // relaxation of cardiac muscle // traceable author statement /// 0070296 // sarcoplasmic reticulum calcium ion transport // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement /// 0086036 // regulation of cardiac muscle cell membrane potential // traceable author statement </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0031095 // platelet dense tubular network membrane // traceable author statement /// 0033017 // sarcoplasmic reticulum membrane // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019829 // cation-transporting ATPase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0086039 // calcium-transporting ATPase activity involved in regulation of cardiac muscle cell membrane potential // traceable author statement </td> <td> 22.22 </td> <td> 907.76 </td> <td> 0.59 </td> <td> 0.57 </td> <td> 0.65 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203835_at </td> <td> 203835_at </td> <td> NM_005512 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005512.1 /DEF=Homo sapiens glycoprotein A repetitions predominant (GARP), mRNA. /FEA=mRNA /GEN=GARP /PROD=glycoprotein A repetitions predominantprecursor /DB_XREF=gi:5031706 /UG=Hs.151641 glycoprotein A repetitions predominant /FL=gb:Z24680.1 gb:NM_005512.1 </td> <td> NM_005512 </td> <td> leucine rich repeat containing 32 </td> <td> LRRC32 </td> <td> 2615 </td> <td> NM_001128922 /// NM_005512 /// XM_005273902 /// XM_005273903 /// XR_428911 </td> <td> 0002755 // MyD88-dependent toll-like receptor signaling pathway // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0034170 // toll-like receptor 11 signaling pathway // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0046007 // negative regulation of activated T cell proliferation // inferred from electronic annotation /// 0050710 // negative regulation of cytokine secretion // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation </td> <td> 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 11.75 </td> <td> 135.80 </td> <td> 0.59 </td> <td> 0.57 </td> <td> 0.65 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203748_x_at </td> <td> 203748_x_at </td> <td> NM_016839 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016839.1 /DEF=Homo sapiens RNA binding motif, single stranded interacting protein 1 (RBMS1), transcript variant MSSP-2, mRNA.  /FEA=mRNA /GEN=RBMS1 /PROD=RNA binding motif, single stranded interactingprotein 1, isoform b /DB_XREF=gi:8400723 /UG=Hs.241567 RNA binding motif, single stranded interacting protein 1 /FL=gb:NM_016839.1 </td> <td> NM_016839 </td> <td> RNA binding motif, single stranded interacting protein 1 </td> <td> RBMS1 </td> <td> 5937 </td> <td> NM_002897 /// NM_016836 /// NM_016839 /// XM_005246737 /// XM_005246738 /// XM_005246739 /// XM_005246740 /// XM_005246741 /// XM_006712671 /// XM_006712672 /// XM_006712673 /// XM_006712674 /// XM_006712675 </td> <td> 0006260 // DNA replication // non-traceable author statement /// 0006396 // RNA processing // traceable author statement </td> <td> 0005634 // nucleus // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // non-traceable author statement /// 0003697 // single-stranded DNA binding // non-traceable author statement /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 13.75 </td> <td> 416.73 </td> <td> 0.59 </td> <td> 0.57 </td> <td> 0.65 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203621_at </td> <td> 203621_at </td> <td> NM_002492 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002492.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5 (16kD, SGDH) (NDUFB5), mRNA.  /FEA=mRNA /GEN=NDUFB5 /PROD=NADH dehydrogenase (ubiquinone) 1 betasubcomplex, 5 (16kD, SGDH) /DB_XREF=gi:4505362 /UG=Hs.19236 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5 (16kD, SGDH) /FL=gb:BC005271.1 gb:AF047181.1 gb:NM_002492.1 </td> <td> NM_002492 </td> <td> NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa </td> <td> NDUFB5 </td> <td> 4711 </td> <td> NM_001199957 /// NM_001199958 /// NM_002492 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement </td> <td> -11.67 </td> <td> 372.11 </td> <td> -0.59 </td> <td> 0.57 </td> <td> 0.65 </td> <td> -4.61 </td> </tr>
  <tr> <td> 212018_s_at </td> <td> 212018_s_at </td> <td> AK000822 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK000822.1 /DEF=Homo sapiens cDNA FLJ20815 fis, clone ADSE01038, highly similar to AJ007398 Homo sapiens mRNA for PBK1 protein.  /FEA=mRNA /DB_XREF=gi:7021134 /UG=Hs.85963 DKFZP564M182 protein </td> <td> AK000822 </td> <td> ribosomal L1 domain containing 1 </td> <td> RSL1D1 </td> <td> 26156 </td> <td> NM_015659 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006412 // translation // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0015934 // large ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 17.10 </td> <td> 177.47 </td> <td> 0.58 </td> <td> 0.58 </td> <td> 0.65 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208737_at </td> <td> 208737_at </td> <td> BC003564 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003564.1 /DEF=Homo sapiens, ATPase, H+ transporting, lysosomal (vacuolar proton pump), member J, clone MGC:1970, mRNA, complete cds.  /FEA=mRNA /PROD=ATPase, H+ transporting, lysosomal (vacuolarproton pump), member J /DB_XREF=gi:13097719 /UG=Hs.90336 ATPase, H+ transporting, lysosomal (vacuolar proton pump), member J /FL=gb:BC003564.1 gb:AF038954.1 gb:NM_004888.1 </td> <td> BC003564 </td> <td> ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 </td> <td> ATP6V1G1 </td> <td> 9550 </td> <td> NM_004888 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction </td> <td> 31.38 </td> <td> 479.54 </td> <td> 0.58 </td> <td> 0.58 </td> <td> 0.65 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200730_s_at </td> <td> 200730_s_at </td> <td> BF576710 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF576710 /FEA=EST /DB_XREF=gi:11650422 /DB_XREF=est:602135085F1 /CLONE=IMAGE:4290141 /UG=Hs.227777 protein tyrosine phosphatase type IVA, member 1 /FL=gb:U48296.1 gb:NM_003463.1 </td> <td> BF576710 </td> <td> protein tyrosine phosphatase type IVA, member 1 </td> <td> PTP4A1 </td> <td> 7803 </td> <td> NM_003463 /// XM_006715563 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // non-traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009898 // cytoplasmic side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // non-traceable author statement /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> 9.67 </td> <td> 290.74 </td> <td> 0.58 </td> <td> 0.58 </td> <td> 0.65 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201972_at </td> <td> 201972_at </td> <td> AF113129 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF113129.1 /DEF=Homo sapiens vacuolar ATPase isoform VA68 mRNA, complete cds. /FEA=mRNA /PROD=vacuolar ATPase isoform VA68 /DB_XREF=gi:6523820 /UG=Hs.281866 ATPase, H+ transporting, lysosomal (vacuolar proton pump), alpha polypeptide, 70kD, isoform 1 /FL=gb:L09235.1 gb:NM_001690.1 gb:AF113129.1 </td> <td> AF113129 </td> <td> ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A </td> <td> ATP6V1A </td> <td> 523 </td> <td> NM_001690 </td> <td> 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // traceable author statement /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation </td> <td> 41.32 </td> <td> 612.84 </td> <td> 0.58 </td> <td> 0.58 </td> <td> 0.65 </td> <td> -4.61 </td> </tr>
  <tr> <td> 65635_at </td> <td> 65635_at </td> <td> AL044097 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AL044097:DKFZp434M1928_s1 Homo sapiens cDNA, 3 end /clone=DKFZp434M1928 /clone_end=3' /gb=AL044097 /gi=5432324 /ug=Hs.29288 /len=605 </td> <td> AL044097 </td> <td> endo-beta-N-acetylglucosaminidase </td> <td> ENGASE </td> <td> 64772 </td> <td> NM_001042573 /// NM_022759 /// XM_006722015 /// XM_006722016 /// XM_006722017 /// XM_006722018 /// XM_006722019 /// XR_429918 /// XR_429919 /// XR_429920 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation </td> <td> 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0033925 // mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity // inferred from electronic annotation </td> <td> -10.80 </td> <td> 169.70 </td> <td> -0.58 </td> <td> 0.58 </td> <td> 0.65 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201261_x_at </td> <td> 201261_x_at </td> <td> BC002416 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002416.1 /DEF=Homo sapiens, biglycan, clone MGC:2298, mRNA, complete cds. /FEA=mRNA /PROD=biglycan /DB_XREF=gi:12803216 /UG=Hs.821 biglycan /FL=gb:BC002416.1 gb:BC004244.1 gb:J04599.1 gb:NM_001711.1 </td> <td> BC002416 </td> <td> biglycan </td> <td> BGN </td> <td> 633 </td> <td> NM_001711 </td> <td> 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0019800 // peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // traceable author statement /// 0030207 // chondroitin sulfate catabolic process // traceable author statement /// 0030208 // dermatan sulfate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0030133 // transport vesicle // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation </td> <td> -22.80 </td> <td> 437.00 </td> <td> -0.58 </td> <td> 0.58 </td> <td> 0.65 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200050_at </td> <td> 200050_at </td> <td> NM_007145 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007145.1 /DEF=Homo sapiens zinc finger protein 146 (ZNF146), mRNA. /FEA=mRNA /GEN=ZNF146 /PROD=zinc finger protein 146 /DB_XREF=gi:6005965 /UG=Hs.301819 zinc finger protein 146 /FL=gb:BC005154.1 gb:NM_007145.1 </td> <td> NM_007145 </td> <td> zinc finger protein 146 </td> <td> ZNF146 </td> <td> 7705 </td> <td> NM_001099638 /// NM_001099639 /// NM_007145 /// XM_005259214 </td> <td> 0006355 // regulation of transcription, DNA-templated // not recorded </td> <td> 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // not recorded /// 0008201 // heparin binding // traceable author statement /// 0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 12.77 </td> <td> 283.84 </td> <td> 0.58 </td> <td> 0.58 </td> <td> 0.65 </td> <td> -4.61 </td> </tr>
  <tr> <td> 221773_at </td> <td> 221773_at </td> <td> AW575374 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW575374 /FEA=EST /DB_XREF=gi:7246913 /DB_XREF=est:UI-HF-BL0-adc-c-12-0-UI.s1 /CLONE=IMAGE:3060887 /UG=Hs.288555 Homo sapiens cDNA: FLJ22425 fis, clone HRC08686 </td> <td> AW575374 </td> <td> ELK3, ETS-domain protein (SRF accessory protein 2) </td> <td> ELK3 </td> <td> 2004 </td> <td> NM_005230 /// XM_006719275 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // not recorded /// 0007165 // signal transduction // traceable author statement /// 0030154 // cell differentiation // not recorded /// 0042060 // wound healing // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // not recorded /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0032422 // purine-rich negative regulatory element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -43.85 </td> <td> 811.73 </td> <td> -0.58 </td> <td> 0.58 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 210768_x_at </td> <td> 210768_x_at </td> <td> AF274935 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF274935.1 /DEF=Homo sapiens PNAS-10 mRNA, complete cds. /FEA=mRNA /PROD=PNAS-10 /DB_XREF=gi:12751037 /UG=Hs.93832 putative membrane protein /FL=gb:AF274935.1 </td> <td> AF274935 </td> <td> transmembrane and coiled-coil domains 1 </td> <td> TMCO1 </td> <td> 54499 </td> <td> NM_001256164 /// NM_001256165 /// NM_019026 /// NR_045818 </td> <td>  </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 11.52 </td> <td> 169.21 </td> <td> 0.58 </td> <td> 0.58 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208829_at </td> <td> 208829_at </td> <td> AF029750 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF029750.1 /DEF=Homo sapiens tapasin (NGS-17) mRNA, complete cds. /FEA=mRNA /GEN=NGS-17 /PROD=tapasin /DB_XREF=gi:2587057 /UG=Hs.179600 TAP binding protein (tapasin) /FL=gb:AF314222.1 gb:AF009510.1 gb:AF029750.1 gb:AB010639.1 gb:NM_003190.1 </td> <td> AF029750 </td> <td> TAP binding protein (tapasin) </td> <td> TAPBP </td> <td> 6892 </td> <td> NM_003190 /// NM_172208 /// NM_172209 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // non-traceable author statement /// 0006952 // defense response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0015833 // peptide transport // traceable author statement /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042886 // amide transport // traceable author statement /// 0050823 // peptide antigen stabilization // inferred from sequence or structural similarity </td> <td> 0000139 // Golgi membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0042824 // MHC class I peptide loading complex // non-traceable author statement /// 0042825 // TAP complex // inferred from direct assay /// 0071556 // integral component of lumenal side of endoplasmic reticulum membrane // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015433 // peptide antigen-transporting ATPase activity // traceable author statement /// 0042288 // MHC class I protein binding // traceable author statement /// 0042605 // peptide antigen binding // traceable author statement /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046978 // TAP1 binding // traceable author statement /// 0046979 // TAP2 binding // inferred from physical interaction /// 0046979 // TAP2 binding // traceable author statement /// 0051082 // unfolded protein binding // traceable author statement </td> <td> -11.82 </td> <td> 208.49 </td> <td> -0.58 </td> <td> 0.58 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203718_at </td> <td> 203718_at </td> <td> NM_006702 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006702.1 /DEF=Homo sapiens neuropathy target esterase (NTE), mRNA. /FEA=mRNA /GEN=NTE /PROD=neuropathy target esterase /DB_XREF=gi:5729950 /UG=Hs.5038 neuropathy target esterase /FL=gb:NM_006702.1 </td> <td> NM_006702 </td> <td> patatin-like phospholipase domain containing 6 </td> <td> PNPLA6 </td> <td> 10908 </td> <td> NM_001166111 /// NM_001166112 /// NM_001166113 /// NM_001166114 /// NM_006702 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0046470 // phosphatidylcholine metabolic process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004622 // lysophospholipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -13.87 </td> <td> 174.14 </td> <td> -0.58 </td> <td> 0.58 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200009_at </td> <td> 200009_at </td> <td> NM_001494 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001494.2 /DEF=Homo sapiens GDP dissociation inhibitor 2 (GDI2), mRNA. /FEA=mRNA /GEN=GDI2 /PROD=GDP dissociation inhibitor 2 /DB_XREF=gi:6598322 /UG=Hs.56845 GDP dissociation inhibitor 2 /FL=gb:BC005145.1 gb:D13988.1 gb:NM_001494.2 </td> <td> NM_001494 </td> <td> GDP dissociation inhibitor 2 </td> <td> GDI2 </td> <td> 2665 </td> <td> NM_001115156 /// NM_001494 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005093 // Rab GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -53.78 </td> <td> 1248.34 </td> <td> -0.57 </td> <td> 0.58 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 214334_x_at </td> <td> 214334_x_at </td> <td> N34846 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N34846 /FEA=EST /DB_XREF=gi:1155988 /DB_XREF=est:yy45e11.s1 /CLONE=IMAGE:276524 /UG=Hs.75416 DAZ associated protein 2 </td> <td> N34846 </td> <td> DAZ associated protein 2 </td> <td> DAZAP2 </td> <td> 9802 </td> <td> NM_001136264 /// NM_001136266 /// NM_001136267 /// NM_001136268 /// NM_001136269 /// NM_014764 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0050699 // WW domain binding // inferred from physical interaction </td> <td> 51.42 </td> <td> 835.19 </td> <td> 0.57 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 210554_s_at </td> <td> 210554_s_at </td> <td> BC002486 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002486.1 /DEF=Homo sapiens, C-terminal binding protein 2, clone MGC:1563, mRNA, complete cds.  /FEA=mRNA /PROD=C-terminal binding protein 2 /DB_XREF=gi:12803334 /UG=Hs.171391 C-terminal binding protein 2 /FL=gb:BC002486.1 </td> <td> BC002486 </td> <td> C-terminal binding protein 2 </td> <td> CTBP2 </td> <td> 1488 </td> <td> NM_001083914 /// NM_001290214 /// NM_001290215 /// NM_001329 /// NM_022802 /// XM_005269561 /// XM_005269562 /// XM_005269563 /// XM_005269564 /// XM_005269565 /// XM_005269567 /// XM_005269568 /// XM_005269569 /// XM_005269570 /// XM_005269571 /// XM_005269572 /// XM_006717641 /// XM_006717642 /// XM_006717643 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 47.70 </td> <td> 599.58 </td> <td> 0.57 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200806_s_at </td> <td> 200806_s_at </td> <td> BE256479 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE256479 /FEA=EST /DB_XREF=gi:9126938 /DB_XREF=est:601111293F1 /CLONE=IMAGE:3352031 /UG=Hs.79037 heat shock 60kD protein 1 (chaperonin) /FL=gb:BC002676.1 gb:BC003030.1 gb:M34664.1 gb:M22382.1 gb:NM_002156.1 </td> <td> BE256479 </td> <td> heat shock 60kDa protein 1 (chaperonin) </td> <td> HSPD1 </td> <td> 3329 </td> <td> NM_002156 /// NM_199440 /// XM_005246518 </td> <td> 0002368 // B cell cytokine production // inferred from direct assay /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // inferred from direct assay /// 0002842 // positive regulation of T cell mediated immune response to tumor cell // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0006458 // 'de novo' protein folding // inferred from sequence or structural similarity /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032733 // positive regulation of interleukin-10 production // inferred from direct assay /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0042026 // protein refolding // inferred from direct assay /// 0042100 // B cell proliferation // inferred from direct assay /// 0042110 // T cell activation // inferred from direct assay /// 0042113 // B cell activation // inferred from direct assay /// 0043032 // positive regulation of macrophage activation // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0048291 // isotype switching to IgG isotypes // inferred from direct assay /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050870 // positive regulation of T cell activation // inferred from direct assay /// 0050870 // positive regulation of T cell activation // inferred from sequence or structural similarity /// 0051131 // chaperone-mediated protein complex assembly // inferred from sequence or structural similarity /// 0051604 // protein maturation // inferred from sequence or structural similarity </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // traceable author statement /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019907 // cyclin-dependent protein kinase activating kinase holoenzyme complex // inferred from direct assay /// 0030135 // coated vesicle // inferred from direct assay /// 0030141 // secretory granule // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0046696 // lipopolysaccharide receptor complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001530 // lipopolysaccharide binding // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003688 // DNA replication origin binding // inferred from sequence or structural similarity /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred by curator /// 0051082 // unfolded protein binding // inferred from sequence or structural similarity /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> 31.43 </td> <td> 942.04 </td> <td> 0.57 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208968_s_at </td> <td> 208968_s_at </td> <td> BC002568 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002568.1 /DEF=Homo sapiens, hypothetical protein, clone MGC:2478, mRNA, complete cds.  /FEA=mRNA /PROD=hypothetical protein /DB_XREF=gi:12803484 /UG=Hs.4900 hypothetical protein /FL=gb:AF248964.1 gb:BC002568.1 gb:AF116609.1 </td> <td> BC002568 </td> <td> cytokine induced apoptosis inhibitor 1 </td> <td> CIAPIN1 </td> <td> 57019 </td> <td> NM_020313 /// XM_005256061 /// XM_005256062 /// XM_005256063 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016226 // iron-sulfur cluster assembly // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation </td> <td> 12.85 </td> <td> 397.93 </td> <td> 0.57 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208691_at </td> <td> 208691_at </td> <td> BC001188 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001188.1 /DEF=Homo sapiens, transferrin receptor (p90, CD71), clone MGC:3151, mRNA, complete cds.  /FEA=mRNA /PROD=transferrin receptor (p90, CD71) /DB_XREF=gi:12654696 /UG=Hs.77356 transferrin receptor (p90, CD71) /FL=gb:BC001188.1 gb:M11507.1 </td> <td> BC001188 </td> <td> transferrin receptor </td> <td> TFRC </td> <td> 7037 </td> <td> NM_001128148 /// NM_003234 </td> <td> 0001558 // regulation of cell growth // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // non-traceable author statement /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // non-traceable author statement /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0045780 // positive regulation of bone resorption // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0097286 // iron ion import // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0003725 // double-stranded RNA binding // inferred from direct assay /// 0004998 // transferrin receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -26.35 </td> <td> 946.52 </td> <td> -0.57 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218934_s_at </td> <td> 218934_s_at </td> <td> NM_014424 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014424.1 /DEF=Homo sapiens heat shock 27kD protein family, member 7 (cardiovascular) (HSPB7), mRNA.  /FEA=mRNA /GEN=HSPB7 /PROD=heat shock 27kD protein family, member 7(cardiovascular) /DB_XREF=gi:7657201 /UG=Hs.56874 heat shock 27kD protein family, member 7 (cardiovascular) /FL=gb:AF155908.1 gb:NM_014424.1 </td> <td> NM_014424 </td> <td> heat shock 27kDa protein family, member 7 (cardiovascular) </td> <td> HSPB7 </td> <td> 27129 </td> <td> NM_014424 </td> <td> 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0031005 // filamin binding // inferred from electronic annotation </td> <td> 8.72 </td> <td> 51.91 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201916_s_at </td> <td> 201916_s_at </td> <td> NM_007214 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007214.1 /DEF=Homo sapiens SEC63, endoplasmic reticulum translocon component (S. cerevisiae) like (SEC63L), mRNA.  /FEA=mRNA /GEN=SEC63L /PROD=SEC63, endoplasmic reticulum transloconcomponent (S. cerevisiae) like /DB_XREF=gi:6005871 /UG=Hs.31575 SEC63, endoplasmic reticulum translocon component (S. cerevisiae) like /FL=gb:AF100141.1 gb:NM_007214.1 </td> <td> NM_007214 </td> <td> SEC63 homolog (S. cerevisiae) </td> <td> SEC63 </td> <td> 11231 </td> <td> NM_007214 /// NM_018529 </td> <td> 0001889 // liver development // inferred from electronic annotation /// 0006612 // protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // inferred from mutant phenotype /// 0006620 // posttranslational protein targeting to membrane // inferred from mutant phenotype /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0031204 // posttranslational protein targeting to membrane, translocation // inferred from electronic annotation /// 0072001 // renal system development // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -15.90 </td> <td> 297.18 </td> <td> -0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 207630_s_at </td> <td> 207630_s_at </td> <td> NM_001881 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001881.1 /DEF=Homo sapiens cAMP responsive element modulator (CREM), mRNA. /FEA=mRNA /GEN=CREM /PROD=cAMP responsive element modulator /DB_XREF=gi:4503038 /UG=Hs.155924 cAMP responsive element modulator /FL=gb:NM_001881.1 gb:S68271.1 </td> <td> NM_001881 </td> <td> cAMP responsive element modulator </td> <td> CREM </td> <td> 1390 </td> <td> NM_001267562 /// NM_001267563 /// NM_001267564 /// NM_001267565 /// NM_001267566 /// NM_001267567 /// NM_001267568 /// NM_001267569 /// NM_001267570 /// NM_001881 /// NM_181571 /// NM_182717 /// NM_182718 /// NM_182719 /// NM_182720 /// NM_182721 /// NM_182722 /// NM_182723 /// NM_182724 /// NM_182725 /// NM_182769 /// NM_182770 /// NM_182771 /// NM_182772 /// NM_182850 /// NM_182853 /// NM_183011 /// NM_183012 /// NM_183013 /// NM_183060 /// NR_051971 /// NR_051972 /// NR_051973 /// NR_051974 /// NR_051975 /// XM_006717378 /// XM_006717379 /// XM_006717380 /// XM_006717381 /// XM_006717382 /// XM_006717383 /// XM_006717384 /// XM_006717385 /// XM_006717386 /// XM_006717387 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006687 // glycosphingolipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008140 // cAMP response element binding protein binding // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -10.22 </td> <td> 137.79 </td> <td> -0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 222229_x_at </td> <td> 222229_x_at </td> <td> AL121871 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL121871 /DEF=Human DNA sequence from clone RP13-258O15 on chromosome Xq21.2-Xq21.33 Contains a pseudogene similar to ribosomal protein L26, STSs and GSSs /FEA=CDS /DB_XREF=gi:6855342 /UG=Hs.272344 Human DNA sequence from clone RP13-258O15 on chromosome Xq21.2-Xq21.33 Contains a pseudogene similar to ribosomal protein L26, STSs and GSSs </td> <td> AL121871 </td> <td> /// ribosomal protein L26 pseudogene 37 /// </td> <td> RP13-258O15.1 /// RPL26P37 /// RPL26P37 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 43.28 </td> <td> 977.76 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 213531_s_at </td> <td> 213531_s_at </td> <td> AI040009 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI040009 /FEA=EST /DB_XREF=gi:3279203 /DB_XREF=est:ox97e08.x1 /CLONE=IMAGE:1664294 /UG=Hs.309509 Human mRNA related to a calmodulin-like, processed pseudogene (302 bp identical to the 3 untranslated region) </td> <td> AI040009 </td> <td> RAB3 GTPase activating protein subunit 1 (catalytic) </td> <td> RAB3GAP1 </td> <td> 22930 </td> <td> NM_001172435 /// NM_012233 /// XR_427077 /// XR_427078 </td> <td> 0007420 // brain development // inferred from mutant phenotype /// 0021854 // hypothalamus development // inferred from mutant phenotype /// 0032851 // positive regulation of Rab GTPase activity // inferred from direct assay /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0034389 // lipid particle organization // inferred from mutant phenotype /// 0043010 // camera-type eye development // inferred from mutant phenotype /// 0043087 // regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from direct assay /// 0017137 // Rab GTPase binding // inferred from physical interaction </td> <td> 12.58 </td> <td> 332.51 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201991_s_at </td> <td> 201991_s_at </td> <td> BF223224 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF223224 /FEA=EST /DB_XREF=gi:11130401 /DB_XREF=est:7q30g05.x1 /CLONE=IMAGE:3700017 /UG=Hs.149436 kinesin family member 5B /FL=gb:NM_004521.1 </td> <td> BF223224 </td> <td> kinesin family member 5B </td> <td> KIF5B </td> <td> 3799 </td> <td> NM_004521 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007018 // microtubule-based movement // traceable author statement /// 0007028 // cytoplasm organization // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0035617 // stress granule disassembly // inferred from sequence or structural similarity /// 0042391 // regulation of membrane potential // inferred from direct assay /// 0043268 // positive regulation of potassium ion transport // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0047496 // vesicle transport along microtubule // inferred from sequence or structural similarity /// 0090004 // positive regulation of establishment of protein localization to plasma membrane // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043227 // membrane-bounded organelle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 25.75 </td> <td> 581.20 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 219269_at </td> <td> 219269_at </td> <td> NM_024567 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024567.1 /DEF=Homo sapiens hypothetical protein FLJ21616 (FLJ21616), mRNA. /FEA=mRNA /GEN=FLJ21616 /PROD=hypothetical protein FLJ21616 /DB_XREF=gi:13375737 /UG=Hs.14562 hypothetical protein FLJ21616 /FL=gb:NM_024567.1 </td> <td> NM_024567 </td> <td> homeobox containing 1 </td> <td> HMBOX1 </td> <td> 79618 </td> <td> NM_001135726 /// NM_024567 /// XM_005273635 /// XM_005273636 /// XM_005273637 /// XM_005273638 /// XM_005273639 /// XM_005273640 /// XM_005273641 /// XM_006716396 /// XM_006716397 /// XM_006716398 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> 18.75 </td> <td> 176.93 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201185_at </td> <td> 201185_at </td> <td> NM_002775 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002775.1 /DEF=Homo sapiens protease, serine, 11 (IGF binding) (PRSS11), mRNA. /FEA=mRNA /GEN=PRSS11 /PROD=protease, serine, 11 (IGF binding) /DB_XREF=gi:4506140 /UG=Hs.75111 protease, serine, 11 (IGF binding) /FL=gb:D87258.1 gb:NM_002775.1 </td> <td> NM_002775 </td> <td> HtrA serine peptidase 1 </td> <td> HTRA1 </td> <td> 5654 </td> <td> NM_002775 </td> <td> 0001558 // regulation of cell growth // inferred from electronic annotation /// 0006508 // proteolysis // inferred from sequence or structural similarity /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation </td> <td> -16.08 </td> <td> 532.06 </td> <td> -0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218368_s_at </td> <td> 218368_s_at </td> <td> NM_016639 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016639.1 /DEF=Homo sapiens type I transmembrane protein Fn14 (FN14), mRNA. /FEA=mRNA /GEN=FN14 /PROD=type I transmembrane protein Fn14 /DB_XREF=gi:7706185 /UG=Hs.10086 type I transmembrane protein Fn14 /FL=gb:BC002718.1 gb:AB035480.1 gb:NM_016639.1 gb:AF191148.1 </td> <td> NM_016639 </td> <td> tumor necrosis factor receptor superfamily, member 12A </td> <td> TNFRSF12A </td> <td> 51330 </td> <td> NM_016639 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0006931 // substrate-dependent cell migration, cell attachment to substrate // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0061041 // regulation of wound healing // inferred from direct assay /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 18.18 </td> <td> 307.86 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208112_x_at </td> <td> 208112_x_at </td> <td> NM_006795 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006795.1 /DEF=Homo sapiens EH domain containing 1 (EHD1), mRNA. /FEA=mRNA /GEN=EHD1 /PROD=EH domain containing 1 /DB_XREF=gi:5803008 /UG=Hs.155119 EH domain containing 1 /FL=gb:AF099011.1 gb:NM_006795.1 </td> <td> NM_006795 </td> <td> EH-domain containing 1 </td> <td> EHD1 </td> <td> 10938 </td> <td> NM_001282444 /// NM_001282445 /// NM_006795 /// XM_006718424 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0010886 // positive regulation of cholesterol storage // inferred from sequence or structural similarity /// 0016197 // endosomal transport // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0032456 // endocytic recycling // inferred from genetic interaction /// 0032456 // endocytic recycling // inferred from mutant phenotype /// 0034383 // low-density lipoprotein particle clearance // inferred from sequence or structural similarity /// 0042632 // cholesterol homeostasis // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from physical interaction /// 1901741 // positive regulation of myoblast fusion // inferred from sequence or structural similarity /// 1990090 // cellular response to nerve growth factor stimulus // inferred from sequence or structural similarity /// 2001137 // positive regulation of endocytic recycling // inferred from sequence or structural similarity </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0010008 // endosome membrane // inferred from sequence or structural similarity /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031095 // platelet dense tubular network membrane // inferred from sequence or structural similarity /// 0031901 // early endosome membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 19.75 </td> <td> 215.75 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 207198_s_at </td> <td> 207198_s_at </td> <td> NM_004987 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004987.2 /DEF=Homo sapiens LIM and senescent cell antigen-like domains 1 (LIMS1), mRNA.  /FEA=mRNA /GEN=LIMS1 /PROD=LIM and senescent cell antigen-like domains 1 /DB_XREF=gi:13518025 /UG=Hs.112378 LIM and senescent cell antigen-like domains 1 /FL=gb:U09284.2 gb:NM_004987.2 </td> <td> NM_004987 </td> <td> LIM and senescent cell antigen-like domains 1 /// LIM and senescent cell antigen-like domains 3-like </td> <td> LIMS1 /// LIMS3L </td> <td> 3987 /// 100288695 </td> <td> NM_001193482 /// NM_001193483 /// NM_001193484 /// NM_001193485 /// NM_001193488 /// NM_001205288 /// NM_004987 /// NR_038099 /// XM_005263563 /// XM_005263946 /// XM_005263947 /// XM_005263948 /// XM_005263949 /// XM_005263950 /// XM_005263951 /// XM_006712167 /// XM_006712524 /// XR_244813 </td> <td> 0007569 // cell aging // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -32.95 </td> <td> 527.85 </td> <td> -0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203310_at </td> <td> 203310_at </td> <td> NM_007269 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007269.1 /DEF=Homo sapiens syntaxin binding protein 3 (STXBP3), mRNA. /FEA=mRNA /GEN=STXBP3 /PROD=syntaxin 4 binding protein /DB_XREF=gi:6005885 /UG=Hs.8813 syntaxin binding protein 3 /FL=gb:D63506.1 gb:AF032922.1 gb:NM_007269.1 </td> <td> NM_007269 </td> <td> syntaxin binding protein 3 </td> <td> STXBP3 </td> <td> 6814 </td> <td> NM_007269 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0043312 // neutrophil degranulation // inferred from expression pattern /// 0045955 // negative regulation of calcium ion-dependent exocytosis // inferred from mutant phenotype /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0070527 // platelet aggregation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031091 // platelet alpha granule // inferred from direct assay /// 0042581 // specific granule // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070820 // tertiary granule // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from physical interaction </td> <td> 9.92 </td> <td> 115.21 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217745_s_at </td> <td> 217745_s_at </td> <td> NM_025146 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025146.1 /DEF=Homo sapiens hypothetical protein FLJ13194 (FLJ13194), mRNA. /FEA=mRNA /GEN=FLJ13194 /PROD=hypothetical protein FLJ13194 /DB_XREF=gi:13376734 /UG=Hs.288932 hypothetical protein FLJ13194 /FL=gb:NM_025146.1 </td> <td> NM_025146 </td> <td> N(alpha)-acetyltransferase 50, NatE catalytic subunit </td> <td> NAA50 </td> <td> 80218 </td> <td> NM_025146 /// XM_005247794 </td> <td> 0006474 // N-terminal protein amino acid acetylation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0071962 // mitotic sister chromatid cohesion, centromeric // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0031415 // NatA complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004596 // peptide alpha-N-acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0010485 // H4 histone acetyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0052858 // peptidyl-lysine N-acetyltransferase activity // inferred from direct assay </td> <td> 29.28 </td> <td> 323.99 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201810_s_at </td> <td> 201810_s_at </td> <td> AL562152 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL562152 /FEA=EST /DB_XREF=gi:12910291 /DB_XREF=est:AL562152 /CLONE=CS0DC001YK23 (3 prime) /UG=Hs.109150 SH3-domain binding protein 5 (BTK-associated) /FL=gb:AB005047.1 gb:NM_004844.1 </td> <td> AL562152 </td> <td> SH3-domain binding protein 5 (BTK-associated) </td> <td> SH3BP5 </td> <td> 9467 </td> <td> NM_001018009 /// NM_004844 /// XM_006713420 </td> <td> 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0035556 // intracellular signal transduction // inferred from direct assay </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0004860 // protein kinase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation </td> <td> 18.53 </td> <td> 203.46 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 40225_at </td> <td> 40225_at </td> <td> D88435 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. D88435:Homo sapiens mRNA for HsGAK, complete cds /cds=(0,3935) /gb=D88435 /gi=2506079 /ug=Hs.153227 /len=4331 </td> <td> D88435 </td> <td> cyclin G associated kinase </td> <td> GAK </td> <td> 2580 </td> <td> NM_001286833 /// NM_005255 /// XM_005272268 /// XM_005272269 /// XM_005272270 /// XM_005272272 /// XM_005272273 /// XM_006713874 </td> <td> 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -14.42 </td> <td> 273.51 </td> <td> -0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 213794_s_at </td> <td> 213794_s_at </td> <td> AI269117 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI269117 /FEA=EST /DB_XREF=gi:3888284 /DB_XREF=est:qj73e04.x1 /CLONE=IMAGE:1865118 /UG=Hs.9043 DKFZP564O092 protein </td> <td> AI269117 </td> <td> neuroguidin, EIF4E binding protein </td> <td> NGDN </td> <td> 25983 </td> <td> NM_001042635 /// NM_015514 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 10.03 </td> <td> 177.19 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202188_at </td> <td> 202188_at </td> <td> NM_014669 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014669.1 /DEF=Homo sapiens KIAA0095 gene product (KIAA0095), mRNA. /FEA=mRNA /GEN=KIAA0095 /PROD=KIAA0095 gene product /DB_XREF=gi:7661901 /UG=Hs.155314 KIAA0095 gene product /FL=gb:D42085.1 gb:NM_014669.1 </td> <td> NM_014669 </td> <td> nucleoporin 93kDa </td> <td> NUP93 </td> <td> 9688 </td> <td> NM_001242795 /// NM_001242796 /// NM_014669 /// XM_005256263 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051292 // nuclear pore complex assembly // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0034399 // nuclear periphery // inferred from direct assay </td> <td> 0017056 // structural constituent of nuclear pore // inferred from mutant phenotype </td> <td> 8.68 </td> <td> 94.29 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 219489_s_at </td> <td> 219489_s_at </td> <td> NM_017821 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017821.1 /DEF=Homo sapiens hypothetical protein FLJ20435 (FLJ20435), mRNA. /FEA=mRNA /GEN=FLJ20435 /PROD=hypothetical protein FLJ20435 /DB_XREF=gi:8923408 /UG=Hs.11408 hypothetical protein FLJ20435 /FL=gb:NM_017821.1 </td> <td> NM_017821 </td> <td> nucleoredoxin </td> <td> NXN </td> <td> 64359 </td> <td> NM_001205319 /// NM_022463 /// XM_005256756 /// XM_005256757 /// XM_005256758 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030178 // negative regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0072358 // cardiovascular system development // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004791 // thioredoxin-disulfide reductase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016209 // antioxidant activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0047134 // protein-disulfide reductase activity // inferred from electronic annotation </td> <td> -11.53 </td> <td> 232.46 </td> <td> -0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218320_s_at </td> <td> 218320_s_at </td> <td> NM_019056 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_019056.1 /DEF=Homo sapiens similar to mouse neuronal protein 15.6 (FLJ20494), mRNA.  /FEA=mRNA /GEN=FLJ20494 /PROD=similar to mouse neuronal protein 15.6 /DB_XREF=gi:9506682 /UG=Hs.111497 similar to mouse neuronal protein 15.6 /FL=gb:NM_019056.1 </td> <td> NM_019056 </td> <td> NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa </td> <td> NDUFB11 </td> <td> 54539 </td> <td> NM_001135998 /// NM_019056 </td> <td> 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td>  </td> <td> -14.47 </td> <td> 270.69 </td> <td> -0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201457_x_at </td> <td> 201457_x_at </td> <td> AF081496 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF081496.1 /DEF=Homo sapiens kinetochore protein BUB3 (BUB3) mRNA, complete cds. /FEA=mRNA /GEN=BUB3 /PROD=kinetochore protein BUB3 /DB_XREF=gi:3639059 /UG=Hs.40323 BUB3 (budding uninhibited by benzimidazoles 3, yeast) homolog /FL=gb:BC005138.1 gb:AF047472.1 gb:AF053304.1 gb:AF081496.1 gb:NM_004725.1 </td> <td> AF081496 </td> <td> BUB3 mitotic checkpoint protein </td> <td> BUB3 </td> <td> 9184 </td> <td> NM_001007793 /// NM_004725 </td> <td> 0000070 // mitotic sister chromatid segregation // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0008608 // attachment of spindle microtubules to kinetochore // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051983 // regulation of chromosome segregation // inferred from electronic annotation /// 0071173 // spindle assembly checkpoint // inferred from direct assay </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 17.17 </td> <td> 596.31 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.66 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203630_s_at </td> <td> 203630_s_at </td> <td> NM_006348 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006348.1 /DEF=Homo sapiens golgi transport complex 1 (90 kDa subunit) (GOLTC1), mRNA.  /FEA=mRNA /GEN=GOLTC1 /PROD=golgi transport complex 1 (90 kDa subunit) /DB_XREF=gi:5453669 /UG=Hs.239631 golgi transport complex 1 (90 kDa subunit) /FL=gb:AF058718.1 gb:NM_006348.1 </td> <td> NM_006348 </td> <td> component of oligomeric golgi complex 5 </td> <td> COG5 </td> <td> 10466 </td> <td> NM_001161520 /// NM_006348 /// NM_181733 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0017119 // Golgi transport complex // non-traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -21.65 </td> <td> 235.20 </td> <td> -0.56 </td> <td> 0.59 </td> <td> 0.67 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216080_s_at </td> <td> 216080_s_at </td> <td> AC004770 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AC004770 /DEF=Homo sapiens chromosome 11, BAC CIT-HSP-311e8 (BC269730) containing the hFEN1 gene /FEA=CDS_3 /DB_XREF=gi:3212836 /UG=Hs.21765 fatty acid desaturase 3 </td> <td> AC004770 </td> <td> fatty acid desaturase 3 </td> <td> FADS3 </td> <td> 3995 </td> <td> NM_021727 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006636 // unsaturated fatty acid biosynthetic process // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016717 // oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation </td> <td> -34.50 </td> <td> 491.00 </td> <td> -0.56 </td> <td> 0.59 </td> <td> 0.67 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216326_s_at </td> <td> 216326_s_at </td> <td> AF059650 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF059650 /DEF=Homo sapiens histone deacetylase 3 (HDAC3) gene, complete cds /FEA=mRNA /DB_XREF=gi:3320449 /UG=Hs.279789 histone deacetylase 3 </td> <td> AF059650 </td> <td> histone deacetylase 3 </td> <td> HDAC3 </td> <td> 8841 </td> <td> NM_003883 /// XM_006714802 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006476 // protein deacetylation // inferred from direct assay /// 0007219 // Notch signaling pathway // traceable author statement /// 0007346 // regulation of mitotic cell cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010832 // negative regulation of myotube differentiation // inferred from mutant phenotype /// 0016568 // chromatin modification // traceable author statement /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0032922 // circadian regulation of gene expression // inferred from electronic annotation /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045786 // negative regulation of cell cycle // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from mutant phenotype /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051225 // spindle assembly // inferred from mutant phenotype /// 0070932 // histone H3 deacetylation // inferred from electronic annotation /// 0070933 // histone H4 deacetylation // inferred from electronic annotation </td> <td> 0000118 // histone deacetylase complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005876 // spindle microtubule // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0004407 // histone deacetylase activity // inferred from mutant phenotype /// 0004407 // histone deacetylase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0030332 // cyclin binding // inferred from physical interaction /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0033558 // protein deacetylase activity // inferred from direct assay /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0097372 // NAD-dependent histone deacetylase activity (H3-K18 specific) // inferred from electronic annotation </td> <td> 7.42 </td> <td> 118.76 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.67 </td> <td> -4.61 </td> </tr>
  <tr> <td> 217934_x_at </td> <td> 217934_x_at </td> <td> NM_005861 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005861.1 /DEF=Homo sapiens STIP1 homology and U-Box containing protein 1 (STUB1), mRNA.  /FEA=mRNA /GEN=STUB1 /PROD=serologically defined colon cancer antigen 7 /DB_XREF=gi:5031962 /UG=Hs.25197 STIP1 homology and U-Box containing protein 1 /FL=gb:AF039689.1 gb:AF129085.1 gb:NM_005861.1 </td> <td> NM_005861 </td> <td> STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase </td> <td> STUB1 </td> <td> 10273 </td> <td> NM_001293197 /// NM_005861 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0000209 // protein polyubiquitination // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0030579 // ubiquitin-dependent SMAD protein catabolic process // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0031943 // regulation of glucocorticoid metabolic process // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0051604 // protein maturation // traceable author statement /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0071218 // cellular response to misfolded protein // inferred from direct assay /// 0090035 // positive regulation of chaperone-mediated protein complex assembly // inferred from direct assay </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0031371 // ubiquitin conjugating enzyme complex // traceable author statement /// 0042405 // nuclear inclusion body // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0004842 // ubiquitin-protein transferase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein transferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from physical interaction /// 0030544 // Hsp70 protein binding // inferred from direct assay /// 0030674 // protein binding, bridging // traceable author statement /// 0030911 // TPR domain binding // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0046332 // SMAD binding // inferred from direct assay /// 0051787 // misfolded protein binding // inferred from direct assay /// 0051879 // Hsp90 protein binding // inferred from direct assay </td> <td> 18.70 </td> <td> 277.73 </td> <td> 0.56 </td> <td> 0.59 </td> <td> 0.67 </td> <td> -4.61 </td> </tr>
  <tr> <td> 205238_at </td> <td> 205238_at </td> <td> NM_024917 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024917.1 /DEF=Homo sapiens hypothetical protein FLJ12687 (FLJ12687), mRNA. /FEA=mRNA /GEN=FLJ12687 /PROD=hypothetical protein FLJ12687 /DB_XREF=gi:13376385 /UG=Hs.263216 hypothetical protein FLJ12687 /FL=gb:NM_024917.1 </td> <td> NM_024917 </td> <td> tRNA methyltransferase 2 homolog B (S. cerevisiae) </td> <td> TRMT2B </td> <td> 79979 </td> <td> NM_001167970 /// NM_001167971 /// NM_001167972 /// NM_024917 /// XM_005262195 /// XM_005262196 /// XM_005262197 /// XM_005262199 /// XM_005262200 /// XM_005262201 /// XM_006724705 /// XM_006724706 /// XM_006724707 </td> <td> 0006396 // RNA processing // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008173 // RNA methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030697 // S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity // inferred from electronic annotation </td> <td> 8.23 </td> <td> 124.36 </td> <td> 0.55 </td> <td> 0.60 </td> <td> 0.67 </td> <td> -4.61 </td> </tr>
  <tr> <td> 212297_at </td> <td> 212297_at </td> <td> BF218804 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF218804 /FEA=EST /DB_XREF=gi:11112494 /DB_XREF=est:601882315F1 /CLONE=IMAGE:4094786 /UG=Hs.4934 H.sapiens polyA site DNA </td> <td> BF218804 </td> <td> ATPase type 13A3 </td> <td> ATP13A3 </td> <td> 79572 </td> <td> NM_024524 /// XM_005269357 /// XM_005269358 /// XM_005269360 /// XM_006713742 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0019829 // cation-transporting ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 14.72 </td> <td> 211.11 </td> <td> 0.55 </td> <td> 0.60 </td> <td> 0.67 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201903_at </td> <td> 201903_at </td> <td> NM_003365 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003365.1 /DEF=Homo sapiens ubiquinol-cytochrome c reductase core protein I (UQCRC1), mRNA.  /FEA=mRNA /GEN=UQCRC1 /PROD=ubiquinol-cytochrome c reductase core protein I /DB_XREF=gi:4507840 /UG=Hs.119251 ubiquinol-cytochrome c reductase core protein I /FL=gb:L16842.1 gb:NM_003365.1 gb:D26485.1 </td> <td> NM_003365 </td> <td> ubiquinol-cytochrome c reductase core protein I </td> <td> UQCRC1 </td> <td> 7384 </td> <td> NM_003365 </td> <td> 0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0014823 // response to activity // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008121 // ubiquinol-cytochrome-c reductase activity // traceable author statement /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 20.75 </td> <td> 326.98 </td> <td> 0.55 </td> <td> 0.60 </td> <td> 0.67 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216508_x_at </td> <td> 216508_x_at </td> <td> AC007277 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AC007277 /DEF=Homo sapiens BAC clone RP11-244E6 from 2 /FEA=CDS /DB_XREF=gi:5091647 /UG=Hs.283906 Homo sapiens BAC clone RP11-244E6 from 2 </td> <td> AC007277 </td> <td> high mobility group box 1 pseudogene 4 /// </td> <td> HMGB1P4 /// HMGB1P4 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 11.45 </td> <td> 254.62 </td> <td> 0.55 </td> <td> 0.60 </td> <td> 0.67 </td> <td> -4.61 </td> </tr>
  <tr> <td> 212016_s_at </td> <td> 212016_s_at </td> <td> AA679988 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA679988 /FEA=EST /DB_XREF=gi:2656455 /DB_XREF=est:ag51f11.s1 /CLONE=IMAGE:1126509 /UG=Hs.172550 polypyrimidine tract binding protein (heterogeneous nuclear ribonucleoprotein I) </td> <td> AA679988 </td> <td> microRNA 4745 /// polypyrimidine tract binding protein 1 </td> <td> MIR4745 /// PTBP1 </td> <td> 5725 /// 100616459 </td> <td> NM_002819 /// NM_031990 /// NM_031991 /// NM_175847 /// NR_039900 /// XM_005259597 /// XM_005259598 /// XR_244034 /// XR_244035 </td> <td> 0000380 // alternative mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000381 // regulation of alternative mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay /// 0051148 // negative regulation of muscle cell differentiation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008187 // poly-pyrimidine tract binding // traceable author statement /// 0036002 // pre-mRNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -10.60 </td> <td> 197.35 </td> <td> -0.55 </td> <td> 0.60 </td> <td> 0.67 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201719_s_at </td> <td> 201719_s_at </td> <td> NM_001431 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001431.1 /DEF=Homo sapiens erythrocyte membrane protein band 4.1-like 2 (EPB41L2), mRNA.  /FEA=mRNA /GEN=EPB41L2 /PROD=erythrocyte membrane protein band 4.1-like 2 /DB_XREF=gi:4503578 /UG=Hs.7857 erythrocyte membrane protein band 4.1-like 2 /FL=gb:AF027299.1 gb:NM_001431.1 </td> <td> NM_001431 </td> <td> erythrocyte membrane protein band 4.1-like 2 </td> <td> EPB41L2 </td> <td> 2037 </td> <td> NM_001135554 /// NM_001135555 /// NM_001199388 /// NM_001199389 /// NM_001252660 /// NM_001431 /// XM_005266840 /// XM_005266841 /// XM_006715356 /// XM_006715357 /// XM_006715358 /// XM_006715359 /// XM_006715360 /// XM_006715361 /// XM_006715362 /// XM_006715363 /// XM_006715364 /// XM_006715365 /// XM_006715366 /// XM_006715367 /// XM_006715368 </td> <td> 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008091 // spectrin // traceable author statement /// 0008180 // COP9 signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0030507 // spectrin binding // inferred from electronic annotation /// 0042731 // PH domain binding // inferred from electronic annotation </td> <td> -14.50 </td> <td> 143.18 </td> <td> -0.55 </td> <td> 0.60 </td> <td> 0.67 </td> <td> -4.61 </td> </tr>
  <tr> <td> 214505_s_at </td> <td> 214505_s_at </td> <td> AF220153 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF220153.1 /DEF=Homo sapiens four and a half LIM domains 1 protein isoform C (FHL1) mRNA, complete cds, alternatively spliced.  /FEA=CDS /GEN=FHL1 /PROD=four and a half LIM domains 1 protein isoform C /DB_XREF=gi:6942192 /UG=Hs.239069 four and a half LIM domains 1 /FL=gb:AF220153.1 </td> <td> AF220153 </td> <td> four and a half LIM domains 1 </td> <td> FHL1 </td> <td> 2273 </td> <td> NM_001159699 /// NM_001159700 /// NM_001159701 /// NM_001159702 /// NM_001159703 /// NM_001159704 /// NM_001167819 /// NM_001449 /// NR_027621 /// XM_006724743 /// XM_006724744 /// XM_006724745 /// XM_006724746 /// XM_006724747 </td> <td> 0003254 // regulation of membrane depolarization // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0009887 // organ morphogenesis // non-traceable author statement /// 0010972 // negative regulation of G2/M transition of mitotic cell cycle // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0043268 // positive regulation of potassium ion transport // inferred from direct assay /// 1901016 // regulation of potassium ion transmembrane transporter activity // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -12.00 </td> <td> 111.70 </td> <td> -0.54 </td> <td> 0.60 </td> <td> 0.67 </td> <td> -4.61 </td> </tr>
  <tr> <td> 210968_s_at </td> <td> 210968_s_at </td> <td> AF333336 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF333336.1 /DEF=Homo sapiens testis specific reticulon 5 protein mRNA, complete cds.  /FEA=mRNA /PROD=testis specific reticulon 5 protein /DB_XREF=gi:13377627 /UG=Hs.65450 reticulon 4 /FL=gb:AF333336.1 </td> <td> AF333336 </td> <td> reticulon 4 </td> <td> RTN4 </td> <td> 57142 </td> <td> NM_007008 /// NM_020532 /// NM_153828 /// NM_207520 /// NM_207521 /// XM_005264434 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007413 // axonal fasciculation // inferred from sequence or structural similarity /// 0021801 // cerebral cortex radial glia guided migration // inferred from sequence or structural similarity /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030334 // regulation of cell migration // inferred from direct assay /// 0030517 // negative regulation of axon extension // inferred from direct assay /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0051960 // regulation of nervous system development // inferred from electronic annotation /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from electronic annotation /// 0071786 // endoplasmic reticulum tubular network organization // inferred from mutant phenotype /// 2000172 // regulation of branching morphogenesis of a nerve // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from mutant phenotype /// 0005635 // nuclear envelope // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 82.70 </td> <td> 1685.00 </td> <td> 0.54 </td> <td> 0.60 </td> <td> 0.67 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202180_s_at </td> <td> 202180_s_at </td> <td> NM_017458 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017458.1 /DEF=Homo sapiens major vault protein (MVP), transcript variant 1, mRNA. /FEA=mRNA /GEN=MVP /PROD=major vault protein /DB_XREF=gi:9665254 /UG=Hs.80680 major vault protein /FL=gb:NM_017458.1 </td> <td> NM_017458 </td> <td> major vault protein </td> <td> MVP </td> <td> 9961 </td> <td> NM_001293204 /// NM_001293205 /// NM_005115 /// NM_017458 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0023057 // negative regulation of signaling // inferred from direct assay /// 0031953 // negative regulation of protein autophosphorylation // inferred from direct assay /// 0038127 // ERBB signaling pathway // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation /// 0061099 // negative regulation of protein tyrosine kinase activity // inferred from direct assay /// 0072376 // protein activation cascade // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from direct assay </td> <td> -11.58 </td> <td> 162.41 </td> <td> -0.54 </td> <td> 0.60 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201777_s_at </td> <td> 201777_s_at </td> <td> BC002525 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002525.1 /DEF=Homo sapiens, KIAA0494 gene product, clone MGC:1949, mRNA, complete cds.  /FEA=mRNA /PROD=KIAA0494 gene product /DB_XREF=gi:12803404 /UG=Hs.62515 KIAA0494 gene product /FL=gb:BC002525.1 gb:AB007963.1 gb:NM_014774.1 </td> <td> BC002525 </td> <td> EF-hand calcium binding domain 14 </td> <td> EFCAB14 </td> <td> 9813 </td> <td> NM_014774 </td> <td>  </td> <td>  </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 8.35 </td> <td> 92.45 </td> <td> 0.54 </td> <td> 0.60 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 215016_x_at </td> <td> 215016_x_at </td> <td> BC004912 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BC004912.1 /DEF=Homo sapiens, clone IMAGE:3534745, mRNA, partial cds. /FEA=mRNA /PROD=Unknown (protein for IMAGE:3534745) /DB_XREF=gi:13436208 /UG=Hs.198689 KIAA0728 protein </td> <td> BC004912 </td> <td> dystonin </td> <td> DST </td> <td> 667 </td> <td> NM_001144769 /// NM_001144770 /// NM_001144771 /// NM_001723 /// NM_015548 /// NM_020388 /// NM_183380 /// XM_005249310 /// XM_005249311 /// XM_005249312 /// XM_005249313 /// XM_005249314 /// XM_005249315 /// XM_005249316 /// XM_005249317 /// XM_005249318 /// XM_005249319 /// XM_005249320 /// XM_005249322 /// XM_005249323 /// XM_005249324 /// XM_005249325 /// XM_005249326 /// XM_006715169 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from direct assay /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006620 // posttranslational protein targeting to membrane // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008090 // retrograde axon cargo transport // inferred from electronic annotation /// 0009611 // response to wounding // inferred from direct assay /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030011 // maintenance of cell polarity // inferred from mutant phenotype /// 0030198 // extracellular matrix organization // traceable author statement /// 0031110 // regulation of microtubule polymerization or depolymerization // inferred from electronic annotation /// 0031122 // cytoplasmic microtubule organization // inferred from electronic annotation /// 0031581 // hemidesmosome assembly // inferred from direct assay /// 0045104 // intermediate filament cytoskeleton organization // inferred from expression pattern /// 0045104 // intermediate filament cytoskeleton organization // inferred from sequence or structural similarity /// 0045104 // intermediate filament cytoskeleton organization // non-traceable author statement /// 0048870 // cell motility // inferred from mutant phenotype /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005604 // basement membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0009925 // basal plasma membrane // non-traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030018 // Z disc // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from direct assay /// 0030056 // hemidesmosome // traceable author statement /// 0030424 // axon // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay /// 0031673 // H zone // inferred from electronic annotation /// 0035371 // microtubule plus-end // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay /// 0060053 // neurofilament cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016887 // ATPase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from direct assay </td> <td> -21.55 </td> <td> 302.10 </td> <td> -0.54 </td> <td> 0.60 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 220027_s_at </td> <td> 220027_s_at </td> <td> NM_017805 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017805.1 /DEF=Homo sapiens hypothetical protein FLJ20401 (FLJ20401), mRNA. /FEA=mRNA /GEN=FLJ20401 /PROD=hypothetical protein FLJ20401 /DB_XREF=gi:8923375 /UG=Hs.233955 hypothetical protein FLJ20401 /FL=gb:NM_017805.1 </td> <td> NM_017805 </td> <td> Ras interacting protein 1 </td> <td> RASIP1 </td> <td> 54922 </td> <td> NM_017805 /// XM_005259023 /// XM_005259024 /// XM_006723250 /// XM_006723251 /// XM_006723252 </td> <td> 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0010507 // negative regulation of autophagy // inferred from mutant phenotype /// 0032319 // regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0048754 // branching morphogenesis of an epithelial tube // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 12.80 </td> <td> 388.70 </td> <td> 0.54 </td> <td> 0.60 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 213811_x_at </td> <td> 213811_x_at </td> <td> AW062341 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW062341 /FEA=EST /DB_XREF=gi:6013726 /DB_XREF=est:IL2-CT0031-080899-001-e09 /UG=Hs.101047 transcription factor 3 (E2A immunoglobulin enhancer binding factors E12E47) </td> <td> AW062341 </td> <td> transcription factor 3 </td> <td> TCF3 </td> <td> 6929 </td> <td> NM_001136139 /// NM_003200 /// XM_005259620 /// XM_006722852 /// XM_006722853 /// XM_006722854 /// XM_006722855 /// XM_006722856 /// XM_006722857 /// XM_006722858 /// XM_006722859 /// XM_006722860 /// XM_006722861 /// XM_006722862 /// XM_006722863 /// XR_430150 /// XR_430151 /// XR_430152 /// XR_430153 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from direct assay /// 0002326 // B cell lineage commitment // non-traceable author statement /// 0006351 // transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030098 // lymphocyte differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030183 // B cell differentiation // non-traceable author statement /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043966 // histone H3 acetylation // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048468 // cell development // inferred from electronic annotation /// 0048541 // Peyer's patch development // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 2000045 // regulation of G1/S transition of mitotic cell cycle // inferred from direct assay </td> <td> 0000788 // nuclear nucleosome // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from physical interaction /// 0035326 // enhancer binding // inferred by curator /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction /// 0070644 // vitamin D response element binding // inferred from direct assay /// 0070888 // E-box binding // inferred from direct assay /// 0070888 // E-box binding // inferred from sequence or structural similarity </td> <td> -17.85 </td> <td> 204.55 </td> <td> -0.54 </td> <td> 0.61 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208097_s_at </td> <td> 208097_s_at </td> <td> NM_030755 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030755.1 /DEF=Homo sapiens thioredoxin-related transmembrane protein (TMX), mRNA. /FEA=mRNA /GEN=TMX /PROD=thioredoxin-related transmembrane protein /DB_XREF=gi:13559515 /FL=gb:NM_030755.1 </td> <td> NM_030755 </td> <td> thioredoxin-related transmembrane protein 1 </td> <td> TMX1 </td> <td> 81542 </td> <td> NM_030755 </td> <td> 0006260 // DNA replication // non-traceable author statement /// 0006457 // protein folding // not recorded /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006950 // response to stress // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0034976 // response to endoplasmic reticulum stress // not recorded /// 0034976 // response to endoplasmic reticulum stress // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045321 // leukocyte activation // non-traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0045927 // positive regulation of growth // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003756 // protein disulfide isomerase activity // not recorded /// 0015036 // disulfide oxidoreductase activity // inferred from direct assay /// 0030612 // arsenate reductase (thioredoxin) activity // non-traceable author statement </td> <td> -12.95 </td> <td> 213.00 </td> <td> -0.54 </td> <td> 0.61 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200063_s_at </td> <td> 200063_s_at </td> <td> BC002398 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002398.1 /DEF=Homo sapiens, nucleophosmin (nucleolar phosphoprotein B23, numatrin), clone MGC:8463, mRNA, complete cds.  /FEA=mRNA /PROD=nucleophosmin (nucleolar phosphoprotein B23,numatrin) /DB_XREF=gi:12803184 /UG=Hs.9614 nucleophosmin (nucleolar phosphoprotein B23, numatrin) /FL=gb:NM_002520.1 gb:BC002398.1 gb:BC003670.1 gb:M23613.1 gb:M26697.1 gb:M28699.1 </td> <td> BC002398 </td> <td> nucleophosmin (nucleolar phosphoprotein B23, numatrin) </td> <td> NPM1 </td> <td> 4869 </td> <td> NM_001037738 /// NM_002520 /// NM_199185 /// XM_005265920 /// XM_006714869 </td> <td> 0006281 // DNA repair // inferred from direct assay /// 0006334 // nucleosome assembly // inferred from direct assay /// 0006334 // nucleosome assembly // traceable author statement /// 0006886 // intracellular protein transport // traceable author statement /// 0006913 // nucleocytoplasmic transport // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // traceable author statement /// 0006950 // response to stress // inferred from mutant phenotype /// 0007098 // centrosome cycle // inferred from mutant phenotype /// 0007098 // centrosome cycle // inferred from sequence or structural similarity /// 0007165 // signal transduction // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007569 // cell aging // inferred from mutant phenotype /// 0007569 // cell aging // inferred from sequence or structural similarity /// 0008104 // protein localization // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0010826 // negative regulation of centrosome duplication // inferred from mutant phenotype /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032071 // regulation of endodeoxyribonuclease activity // inferred from direct assay /// 0034080 // centromere-specific nucleosome assembly // traceable author statement /// 0042255 // ribosome assembly // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 0044387 // negative regulation of protein kinase activity by regulation of protein phosphorylation // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay /// 0046599 // regulation of centriole replication // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051259 // protein oligomerization // inferred from direct assay /// 0060699 // regulation of endoribonuclease activity // inferred from direct assay /// 0060735 // regulation of eIF2 alpha phosphorylation by dsRNA // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0031616 // spindle pole centrosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003723 // RNA binding // inferred from direct assay /// 0004860 // protein kinase inhibitor activity // inferred from direct assay /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043023 // ribosomal large subunit binding // inferred from direct assay /// 0043024 // ribosomal small subunit binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from mutant phenotype /// 0051059 // NF-kappaB binding // inferred from direct assay /// 0051059 // NF-kappaB binding // inferred from sequence or structural similarity /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from sequence or structural similarity </td> <td> -78.20 </td> <td> 2381.38 </td> <td> -0.54 </td> <td> 0.61 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 219464_at </td> <td> 219464_at </td> <td> NM_012113 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012113.1 /DEF=Homo sapiens carbonic anhydrase XIV (CA14), mRNA. /FEA=mRNA /GEN=CA14 /PROD=carbonic anhydrase XIV precursor /DB_XREF=gi:6912283 /UG=Hs.235168 carbonic anhydrase XIV /FL=gb:AB025904.1 gb:NM_012113.1 </td> <td> NM_012113 </td> <td> carbonic anhydrase XIV </td> <td> CA14 </td> <td> 23632 </td> <td> NM_012113 /// XM_005245059 /// XM_005245060 /// XM_006711259 /// XM_006711260 /// XM_006711261 </td> <td> 0015701 // bicarbonate transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -8.13 </td> <td> 71.56 </td> <td> -0.53 </td> <td> 0.61 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 204165_at </td> <td> 204165_at </td> <td> NM_003931 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003931.1 /DEF=Homo sapiens WAS protein family, member 1 (WASF1), mRNA. /FEA=mRNA /GEN=WASF1 /PROD=WAS protein family, member 1 /DB_XREF=gi:4507912 /UG=Hs.75850 WAS protein family, member 1 /FL=gb:D87459.1 gb:NM_003931.1 gb:AF134303.1 </td> <td> NM_003931 </td> <td> WAS protein family, member 1 </td> <td> WASF1 </td> <td> 8936 </td> <td> NM_001024934 /// NM_001024935 /// NM_001024936 /// NM_003931 /// XM_005267203 /// XM_005267204 /// XM_005267205 /// XM_005267206 /// XM_005267207 /// XM_005267208 /// XM_006715595 </td> <td> 0006461 // protein complex assembly // non-traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0016601 // Rac protein signal transduction // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030041 // actin filament polymerization // traceable author statement /// 0072673 // lamellipodium morphogenesis // inferred from electronic annotation /// 2000601 // positive regulation of Arp2/3 complex-mediated actin nucleation // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031209 // SCAR complex // inferred from mutant phenotype /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from mutant phenotype /// 0048365 // Rac GTPase binding // inferred from mutant phenotype </td> <td> -16.85 </td> <td> 153.05 </td> <td> -0.53 </td> <td> 0.61 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 205263_at </td> <td> 205263_at </td> <td> AF082283 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF082283.1 /DEF=Homo sapiens CARD-containing apoptotic signaling protein (BCL10) mRNA, complete cds.  /FEA=mRNA /GEN=BCL10 /PROD=CARD-containing apoptotic signaling protein /DB_XREF=gi:4092066 /UG=Hs.193516 B-cell CLLlymphoma 10 /FL=gb:AF082283.1 gb:AF057700.1 gb:AF100338.1 gb:NM_003921.1 gb:AF127386.1 gb:AF134395.1 gb:AF105066.1 </td> <td> AF082283 </td> <td> B-cell CLL/lymphoma 10 </td> <td> BCL10 </td> <td> 8915 </td> <td> NM_003921 /// XM_005271311 </td> <td> 0001783 // B cell apoptotic process // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from sequence or structural similarity /// 0002224 // toll-like receptor signaling pathway // inferred by curator /// 0002237 // response to molecule of bacterial origin // inferred from expression pattern /// 0002250 // adaptive immune response // traceable author statement /// 0002906 // negative regulation of mature B cell apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // inferred from direct assay /// 0006968 // cellular defense response // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0009620 // response to fungus // inferred from electronic annotation /// 0016064 // immunoglobulin mediated immune response // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032094 // response to food // inferred from direct assay /// 0032765 // positive regulation of mast cell cytokine production // non-traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042109 // lymphotoxin A biosynthetic process // non-traceable author statement /// 0042221 // response to chemical // inferred from direct assay /// 0042226 // interleukin-6 biosynthetic process // non-traceable author statement /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0045416 // positive regulation of interleukin-8 biosynthetic process // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050856 // regulation of T cell receptor signaling pathway // inferred from electronic annotation /// 0050870 // positive regulation of T cell activation // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051259 // protein oligomerization // inferred from physical interaction /// 0051260 // protein homooligomerization // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // traceable author statement /// 0070231 // T cell apoptotic process // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0001772 // immunological synapse // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0032449 // CBM complex // non-traceable author statement /// 0042101 // T cell receptor complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0046696 // lipopolysaccharide receptor complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019209 // kinase activator activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay /// 0043422 // protein kinase B binding // inferred from physical interaction /// 0043621 // protein self-association // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from direct assay </td> <td> -29.58 </td> <td> 593.79 </td> <td> -0.53 </td> <td> 0.61 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 213735_s_at </td> <td> 213735_s_at </td> <td> AI557312 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI557312 /FEA=EST /DB_XREF=gi:4489675 /DB_XREF=est:PT2.1_16_E11.r /UG=Hs.1342 cytochrome c oxidase subunit Vb </td> <td> AI557312 </td> <td> cytochrome c oxidase subunit Vb </td> <td> COX5B </td> <td> 1329 </td> <td> NM_001862 </td> <td> 0007585 // respiratory gaseous exchange // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -33.90 </td> <td> 714.92 </td> <td> -0.53 </td> <td> 0.61 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200064_at </td> <td> 200064_at </td> <td> AF275719 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF275719.1 /DEF=Homo sapiens isolate Liv chaperone protein HSP90 beta (HSP90BETA) mRNA, complete cds.  /FEA=mRNA /GEN=HSP90BETA /PROD=chaperone protein HSP90 beta /DB_XREF=gi:9082288 /UG=Hs.74335 heat shock 90kD protein 1, beta /FL=gb:BC004928.1 gb:M16660.1 gb:NM_007355.1 gb:AF275719.1 </td> <td> AF275719 </td> <td> heat shock protein 90kDa alpha (cytosolic), class B member 1 </td> <td> HSP90AB1 </td> <td> 3326 </td> <td> NM_001271969 /// NM_001271970 /// NM_001271971 /// NM_001271972 /// NM_007355 /// NR_073528 /// XM_005249075 </td> <td> 0001890 // placenta development // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0009651 // response to salt stress // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045793 // positive regulation of cell size // inferred from electronic annotation /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // inferred from mutant phenotype /// 0060338 // regulation of type I interferon-mediated signaling pathway // inferred from mutant phenotype /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008180 // COP9 signalosome // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016234 // inclusion body // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0002134 // UTP binding // inferred from electronic annotation /// 0002135 // CTP binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0017098 // sulfonylurea receptor binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0023026 // MHC class II protein complex binding // inferred from direct assay /// 0030235 // nitric-oxide synthase regulator activity // inferred from sequence or structural similarity /// 0030911 // TPR domain binding // inferred from sequence or structural similarity /// 0032564 // dATP binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -118.63 </td> <td> 2640.36 </td> <td> -0.53 </td> <td> 0.61 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208961_s_at </td> <td> 208961_s_at </td> <td> AB017493 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB017493.1 /DEF=Homo sapiens mRNA for DNA-binding zinc finger(GBF), complete cds. /FEA=mRNA /PROD=DNA-binding zinc finger(GBF) /DB_XREF=gi:3582142 /UG=Hs.285313 core promoter element binding protein /FL=gb:BC000311.1 gb:BC004301.1 gb:AF001461.1 gb:AB017493.1 gb:NM_001300.2 </td> <td> AB017493 </td> <td> Kruppel-like factor 6 </td> <td> KLF6 </td> <td> 1316 </td> <td> NM_001008490 /// NM_001160124 /// NM_001160125 /// NM_001300 /// NR_027653 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0016049 // cell growth // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030183 // B cell differentiation // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -22.35 </td> <td> 338.10 </td> <td> -0.53 </td> <td> 0.61 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201405_s_at </td> <td> 201405_s_at </td> <td> NM_006833 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006833.1 /DEF=Homo sapiens COP9 subunit 6 (MOV34 homolog, 34 kD) (MOV34-34KD), mRNA.  /FEA=mRNA /GEN=MOV34-34KD /PROD=COP9 subunit 6 (MOV34 homolog, 34 kD) /DB_XREF=gi:5803095 /UG=Hs.15591 COP9 subunit 6 (MOV34 homolog, 34 kD) /FL=gb:BC002520.1 gb:U70735.1 gb:NM_006833.1 </td> <td> NM_006833 </td> <td> COP9 signalosome subunit 6 </td> <td> COPS6 </td> <td> 10980 </td> <td> NM_006833 </td> <td> 0010388 // cullin deneddylation // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // COP9 signalosome // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 22.55 </td> <td> 427.62 </td> <td> 0.53 </td> <td> 0.61 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208700_s_at </td> <td> 208700_s_at </td> <td> L12711 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L12711.1 /DEF=Homo sapiens transketolase (tk) mRNA, complete cds. /FEA=mRNA /GEN=tk /PROD=transketolase /DB_XREF=gi:388890 /UG=Hs.89643 transketolase (Wernicke-Korsakoff syndrome) /FL=gb:U55017.1 gb:L12711.1 gb:NM_001064.1 </td> <td> L12711 </td> <td> transketolase </td> <td> TKT </td> <td> 7086 </td> <td> NM_001064 /// NM_001135055 /// NM_001135056 /// NM_001258028 /// NR_047579 /// NR_047580 /// XM_006713319 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0005999 // xylulose biosynthetic process // traceable author statement /// 0006098 // pentose-phosphate shunt // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009052 // pentose-phosphate shunt, non-oxidative branch // non-traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046166 // glyceraldehyde-3-phosphate biosynthetic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005777 // peroxisome // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004802 // transketolase activity // not recorded /// 0004802 // transketolase activity // inferred from direct assay /// 0016624 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from direct assay </td> <td> -63.83 </td> <td> 824.26 </td> <td> -0.53 </td> <td> 0.61 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201340_s_at </td> <td> 201340_s_at </td> <td> AF010314 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF010314.1 /DEF=Homo sapiens Pig10 (PIG10) mRNA, complete cds. /FEA=mRNA /GEN=PIG10 /PROD=Pig10 /DB_XREF=gi:2415303 /UG=Hs.104925 ectodermal-neural cortex (with BTB-like domain) /FL=gb:BC000418.1 gb:AF010314.1 gb:AF059611.1 gb:AF005381.1 gb:NM_003633.1 </td> <td> AF010314 </td> <td> ectodermal-neural cortex 1 (with BTB domain) </td> <td> ENC1 </td> <td> 8507 </td> <td> NM_001256574 /// NM_001256575 /// NM_001256576 /// NM_003633 /// NR_046318 </td> <td> 0007275 // multicellular organismal development // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0010499 // proteasomal ubiquitin-independent protein catabolic process // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from direct assay </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -11.63 </td> <td> 111.96 </td> <td> -0.53 </td> <td> 0.61 </td> <td> 0.68 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200964_at </td> <td> 200964_at </td> <td> NM_003334 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003334.1 /DEF=Homo sapiens ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (UBE1), mRNA.  /FEA=mRNA /GEN=UBE1 /PROD=ubiquitin-activating enzyme E1 (A1S9T and BN75temperature sensitivity complementing) /DB_XREF=gi:4507762 /UG=Hs.2055 ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) /FL=gb:M58028.1 gb:NM_003334.1 </td> <td> NM_003334 </td> <td> ubiquitin-like modifier activating enzyme 1 </td> <td> UBA1 </td> <td> 7317 </td> <td> NM_003334 /// NM_153280 /// XM_005272648 /// XM_005272649 /// XM_005272650 </td> <td> 0006464 // cellular protein modification process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0016567 // protein ubiquitination // not recorded /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019941 // modification-dependent protein catabolic process // not recorded </td> <td> 0000792 // heterochromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005829 // cytosol // not recorded /// 0010008 // endosome membrane // inferred from direct assay /// 0030057 // desmosome // inferred from direct assay /// 0030867 // rough endoplasmic reticulum membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004839 // ubiquitin activating enzyme activity // not recorded /// 0004842 // ubiquitin-protein transferase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008641 // small protein activating enzyme activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 30.20 </td> <td> 1029.53 </td> <td> 0.53 </td> <td> 0.61 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209581_at </td> <td> 209581_at </td> <td> BC001387 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001387.1 /DEF=Homo sapiens, similar to rat HREV107, clone MGC:1240, mRNA, complete cds.  /FEA=mRNA /PROD=similar to rat HREV107 /DB_XREF=gi:12655072 /UG=Hs.37189 similar to rat HREV107 /FL=gb:BC001387.1 gb:NM_007069.1 gb:AB030814.1 </td> <td> BC001387 </td> <td> phospholipase A2, group XVI </td> <td> PLA2G16 </td> <td> 11145 </td> <td> NM_001128203 /// NM_007069 /// XM_006718426 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // inferred from direct assay /// 0006644 // phospholipid metabolic process // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0036149 // phosphatidylinositol acyl-chain remodeling // traceable author statement /// 0036150 // phosphatidylserine acyl-chain remodeling // traceable author statement /// 0036151 // phosphatidylcholine acyl-chain remodeling // traceable author statement /// 0036152 // phosphatidylethanolamine acyl-chain remodeling // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from electronic annotation /// 0046474 // glycerophospholipid biosynthetic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0004623 // phospholipase A2 activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008970 // phosphatidylcholine 1-acylhydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0052739 // phosphatidylserine 1-acylhydrolase activity // inferred from electronic annotation /// 0052740 // 1-acyl-2-lysophosphatidylserine acylhydrolase activity // inferred from electronic annotation </td> <td> -7.13 </td> <td> 77.01 </td> <td> -0.52 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200655_s_at </td> <td> 200655_s_at </td> <td> NM_006888 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006888.1 /DEF=Homo sapiens calmodulin 1 (phosphorylase kinase, delta) (CALM1), mRNA.  /FEA=mRNA /GEN=CALM1 /PROD=calmodulin 1 (phosphorylase kinase, delta) /DB_XREF=gi:5901911 /UG=Hs.177656 calmodulin 1 (phosphorylase kinase, delta) /FL=gb:M27319.1 gb:NM_006888.1 </td> <td> NM_006888 </td> <td> calmodulin 1 (phosphorylase kinase, delta) /// calmodulin 2 (phosphorylase kinase, delta) /// calmodulin 3 (phosphorylase kinase, delta) </td> <td> CALM1 /// CALM2 /// CALM3 </td> <td> 801 /// 805 /// 808 </td> <td> NM_001166106 /// NM_001743 /// NM_005184 /// NM_006888 /// XM_006720258 </td> <td> 0001975 // response to amphetamine // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0005513 // detection of calcium ion // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007190 // activation of adenylate cyclase activity // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // inferred from direct assay /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred by curator /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030801 // positive regulation of cyclic nucleotide metabolic process // inferred from direct assay /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0051343 // positive regulation of cyclic-nucleotide phosphodiesterase activity // inferred from direct assay /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay /// 0055117 // regulation of cardiac muscle contraction // inferred from mutant phenotype /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from electronic annotation /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060316 // positive regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0061024 // membrane organization // traceable author statement /// 1901841 // regulation of high voltage-gated calcium channel activity // inferred from electronic annotation /// 1901844 // regulation of cell communication by electrical coupling involved in cardiac conduction // inferred by curator </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0030017 // sarcomere // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008179 // adenylate cyclase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0030235 // nitric-oxide synthase regulator activity // inferred from electronic annotation /// 0031432 // titin binding // inferred from physical interaction /// 0031800 // type 3 metabotropic glutamate receptor binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction /// 0031997 // N-terminal myristoylation domain binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation /// 0050998 // nitric-oxide synthase binding // inferred from electronic annotation /// 0072542 // protein phosphatase activator activity // inferred from direct assay </td> <td> -46.10 </td> <td> 1218.00 </td> <td> -0.52 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208937_s_at </td> <td> 208937_s_at </td> <td> D13889 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D13889.1 /DEF=Human mRNA for Id-1H, complete cds. /FEA=mRNA /GEN=Id-1H /PROD=Id-1H /DB_XREF=gi:464181 /UG=Hs.75424 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein /FL=gb:BC000613.1 gb:NM_002165.1 gb:D13889.1 </td> <td> D13889 </td> <td> inhibitor of DNA binding 1, dominant negative helix-loop-helix protein </td> <td> ID1 </td> <td> 3397 </td> <td> NM_002165 /// NM_181353 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001525 // angiogenesis // traceable author statement /// 0001886 // endothelial cell morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0010621 // negative regulation of transcription by transcription factor localization // traceable author statement /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from electronic annotation /// 0032963 // collagen metabolic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from electronic annotation /// 0043408 // regulation of MAPK cascade // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043534 // blood vessel endothelial cell migration // traceable author statement /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0046677 // response to antibiotic // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // traceable author statement /// 0060425 // lung morphogenesis // inferred from electronic annotation /// 0060426 // lung vasculature development // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -16.28 </td> <td> 205.26 </td> <td> -0.52 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218228_s_at </td> <td> 218228_s_at </td> <td> NM_025235 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025235.1 /DEF=Homo sapiens tankyrase 2 (TNKL), mRNA. /FEA=mRNA /GEN=TNKL /PROD=tankyrase 2 /DB_XREF=gi:13376841 /UG=Hs.280776 tankyrase 2 /FL=gb:AF264912.1 gb:AF329696.1 gb:NM_025235.1 gb:AF342982.1 </td> <td> NM_025235 </td> <td> tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 </td> <td> TNKS2 </td> <td> 80351 </td> <td> NM_025235 /// XM_005270185 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0006471 // protein ADP-ribosylation // inferred from direct assay /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0032212 // positive regulation of telomere maintenance via telomerase // inferred by curator /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0070198 // protein localization to chromosome, telomeric region // inferred from mutant phenotype /// 0070213 // protein auto-ADP-ribosylation // inferred from direct assay /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0000242 // pericentriolar material // inferred from direct assay /// 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0000784 // nuclear chromosome, telomeric region // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -12.18 </td> <td> 160.54 </td> <td> -0.52 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216524_x_at </td> <td> 216524_x_at </td> <td> AL049260 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049260.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564E233 (from clone DKFZp564E233). /FEA=mRNA /DB_XREF=gi:4500007 /UG=Hs.302050 Homo sapiens mRNA; cDNA DKFZp564E233 (from clone DKFZp564E233) </td> <td> AL049260 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 13.70 </td> <td> 98.35 </td> <td> 0.52 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 37005_at </td> <td> 37005_at </td> <td> D28124 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. D28124:Human mRNA for unknown product, complete cds /cds=(61,603) /gb=D28124 /gi=641821 /ug=Hs.76307 /len=1929 </td> <td> D28124 </td> <td> MINOS1-NBL1 readthrough /// neuroblastoma 1, DAN family BMP antagonist </td> <td> MINOS1-NBL1 /// NBL1 </td> <td> 4681 /// 100532736 </td> <td> NM_001204084 /// NM_001204085 /// NM_001204086 /// NM_001204088 /// NM_001204089 /// NM_001278164 /// NM_001278165 /// NM_001278166 /// NM_005380 /// NM_182744 </td> <td> 0007399 // nervous system development // inferred from sequence or structural similarity /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0035582 // sequestering of BMP in extracellular matrix // inferred from sequence or structural similarity /// 0038098 // sequestering of BMP from receptor via BMP binding // inferred from direct assay /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0048263 // determination of dorsal identity // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0090027 // negative regulation of monocyte chemotaxis // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred by curator /// 0005739 // mitochondrion //  /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0016015 // morphogen activity // inferred from sequence or structural similarity /// 0036122 // BMP binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from mutant phenotype </td> <td> -10.00 </td> <td> 221.22 </td> <td> -0.52 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202515_at </td> <td> 202515_at </td> <td> BG251175 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG251175 /FEA=EST /DB_XREF=gi:12760991 /DB_XREF=est:602364982F1 /CLONE=IMAGE:4473165 /UG=Hs.154294 discs, large (Drosophila) homolog 1 /FL=gb:NM_004087.1 gb:U13896.1 </td> <td> BG251175 </td> <td> discs, large homolog 1 (Drosophila) </td> <td> DLG1 </td> <td> 1739 </td> <td> NM_001098424 /// NM_001204386 /// NM_001204387 /// NM_001204388 /// NM_001290983 /// NM_004087 /// XM_005269289 /// XM_005269290 /// XM_005269291 /// XM_005269292 /// XM_005269297 /// XM_005269298 /// XM_005269299 /// XM_005269301 /// XM_006713520 /// XM_006713521 /// XR_246039 </td> <td> 0001657 // ureteric bud development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001771 // immunological synapse formation // inferred from electronic annotation /// 0001935 // endothelial cell proliferation // inferred from direct assay /// 0002088 // lens development in camera-type eye // inferred from electronic annotation /// 0002369 // T cell cytokine production // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from direct assay /// 0007093 // mitotic cell cycle checkpoint // non-traceable author statement /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0016337 // single organismal cell-cell adhesion // inferred from direct assay /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030432 // peristalsis // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0030866 // cortical actin cytoskeleton organization // inferred from direct assay /// 0031579 // membrane raft organization // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0042110 // T cell activation // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from direct assay /// 0042982 // amyloid precursor protein metabolic process // inferred from electronic annotation /// 0043268 // positive regulation of potassium ion transport // inferred from direct assay /// 0045930 // negative regulation of mitotic cell cycle // inferred from mutant phenotype /// 0046939 // nucleotide phosphorylation // traceable author statement /// 0048608 // reproductive structure development // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048729 // tissue morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060022 // hard palate development // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from direct assay /// 0072659 // protein localization to plasma membrane // inferred from mutant phenotype /// 0072659 // protein localization to plasma membrane // traceable author statement /// 0090004 // positive regulation of establishment of protein localization to plasma membrane // inferred from direct assay /// 1902305 // regulation of sodium ion transmembrane transport // traceable author statement </td> <td> 0001772 // immunological synapse // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005923 // tight junction // inferred from direct assay /// 0009898 // cytoplasmic side of plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0014704 // intercalated disc // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0031253 // cell projection membrane // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0033268 // node of Ranvier // inferred from electronic annotation /// 0035748 // myelin sheath abaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043219 // lateral loop // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097025 // MPP7-DLG1-LIN7 complex // inferred from direct assay </td> <td> 0004385 // guanylate kinase activity // traceable author statement /// 0004721 // phosphoprotein phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // traceable author statement /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0015459 // potassium channel regulator activity // non-traceable author statement /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019902 // phosphatase binding // inferred from physical interaction /// 0031434 // mitogen-activated protein kinase kinase binding // inferred from physical interaction /// 0032947 // protein complex scaffold // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0097016 // L27 domain binding // inferred from physical interaction </td> <td> 8.70 </td> <td> 227.97 </td> <td> 0.52 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208895_s_at </td> <td> 208895_s_at </td> <td> BG530850 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG530850 /FEA=EST /DB_XREF=gi:13522387 /DB_XREF=est:602559887F1 /CLONE=IMAGE:4698044 /UG=Hs.100555 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 18 (Myc-regulated) /FL=gb:BC001238.1 gb:BC003360.1 </td> <td> BG530850 </td> <td> DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 </td> <td> DDX18 </td> <td> 8886 </td> <td> NM_006773 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -12.82 </td> <td> 163.71 </td> <td> -0.52 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209070_s_at </td> <td> 209070_s_at </td> <td> AI183997 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI183997 /FEA=EST /DB_XREF=gi:3734635 /DB_XREF=est:qd69h09.x1 /CLONE=IMAGE:1734785 /UG=Hs.24950 regulator of G-protein signalling 5 /FL=gb:AB008109.1 gb:NM_003617.1 gb:AF159570.1 </td> <td> AI183997 </td> <td> regulator of G-protein signaling 5 </td> <td> RGS5 </td> <td> 8490 </td> <td> NM_001195303 /// NM_001254748 /// NM_001254749 /// NM_003617 /// NM_025226 /// NR_045630 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // not recorded </td> <td> -65.98 </td> <td> 1214.34 </td> <td> -0.52 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 210178_x_at </td> <td> 210178_x_at </td> <td> AF047448 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF047448.1 /DEF=Homo sapiens TLS-associated protein TASR mRNA, complete cds. /FEA=mRNA /PROD=TLS-associated protein TASR /DB_XREF=gi:2961148 /UG=Hs.288038 TLS-associated serine-arginine protein 1 /FL=gb:BC001107.1 gb:AF047448.1 </td> <td> AF047448 </td> <td> serine/arginine-rich splicing factor 10 </td> <td> SRSF10 </td> <td> 10772 </td> <td> NM_001191005 /// NM_001191006 /// NM_001191007 /// NM_001191009 /// NM_006625 /// NM_054016 /// NR_034035 /// XM_006710298 /// XM_006710299 /// XM_006710300 /// XM_006710301 </td> <td> 0000244 // spliceosomal tri-snRNP complex assembly // non-traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000398 // mRNA splicing, via spliceosome // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006376 // mRNA splice site selection // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // non-traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from direct assay /// 0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from direct assay </td> <td> 0005634 // nucleus // inferred by curator /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050733 // RS domain binding // non-traceable author statement /// 0051082 // unfolded protein binding // non-traceable author statement </td> <td> -14.62 </td> <td> 193.89 </td> <td> -0.52 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203590_at </td> <td> 203590_at </td> <td> NM_006141 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006141.1 /DEF=Homo sapiens dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2), mRNA.  /FEA=mRNA /GEN=DNCLI2 /PROD=dynein, cytoplasmic, light intermediatepolypeptide 2 /DB_XREF=gi:5453633 /UG=Hs.194625 dynein, cytoplasmic, light intermediate polypeptide 2 /FL=gb:AF035812.1 gb:NM_006141.1 </td> <td> NM_006141 </td> <td> dynein, cytoplasmic 1, light intermediate chain 2 </td> <td> DYNC1LI2 </td> <td> 1783 </td> <td> NM_001286157 /// NM_006141 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0051642 // centrosome localization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030286 // dynein complex // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation </td> <td> -16.53 </td> <td> 240.41 </td> <td> -0.52 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200790_at </td> <td> 200790_at </td> <td> NM_002539 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002539.1 /DEF=Homo sapiens ornithine decarboxylase 1 (ODC1) mRNA. /FEA=mRNA /GEN=ODC1 /PROD=ornithine decarboxylase 1 /DB_XREF=gi:4505488 /UG=Hs.75212 ornithine decarboxylase 1 /FL=gb:M16650.1 gb:NM_002539.1 </td> <td> NM_002539 </td> <td> ornithine decarboxylase 1 </td> <td> ODC1 </td> <td> 4953 </td> <td> NM_001287188 /// NM_001287189 /// NM_001287190 /// NM_002539 </td> <td> 0001822 // kidney development // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0006596 // polyamine biosynthetic process // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009446 // putrescine biosynthetic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0033387 // putrescine biosynthetic process from ornithine // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004586 // ornithine decarboxylase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity </td> <td> 26.40 </td> <td> 937.52 </td> <td> 0.52 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208478_s_at </td> <td> 208478_s_at </td> <td> NM_004324 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004324.1 /DEF=Homo sapiens BCL2-associated X protein (BAX), mRNA. /FEA=CDS /GEN=BAX /PROD=BCL2-associated X protein /DB_XREF=gi:4757837 /UG=Hs.159428 BCL2-associated X protein /FL=gb:L22474.1 gb:NM_004324.1 </td> <td> NM_004324 </td> <td> BCL2-associated X protein </td> <td> BAX </td> <td> 581 </td> <td> NM_001291428 /// NM_001291429 /// NM_001291430 /// NM_001291431 /// NM_004324 /// NM_138761 /// NM_138762 /// NM_138763 /// NM_138764 /// NR_027882 /// XM_006723313 /// XM_006723314 </td> <td> 0001101 // response to acid // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001776 // leukocyte homeostasis // inferred from electronic annotation /// 0001777 // T cell homeostatic proliferation // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001783 // B cell apoptotic process // inferred from direct assay /// 0001822 // kidney development // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from direct assay /// 0001844 // protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002262 // myeloid cell homeostasis // inferred from electronic annotation /// 0002352 // B cell negative selection // inferred from electronic annotation /// 0002358 // B cell homeostatic proliferation // inferred from electronic annotation /// 0002904 // positive regulation of B cell apoptotic process // inferred from electronic annotation /// 0006309 // apoptotic DNA fragmentation // inferred from mutant phenotype /// 0006687 // glycosphingolipid metabolic process // inferred from electronic annotation /// 0006808 // regulation of nitrogen utilization // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0006927 // transformed cell apoptotic process // inferred from mutant phenotype /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008053 // mitochondrial fusion // inferred from direct assay /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred by curator /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // not recorded /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // inferred from direct assay /// 0008637 // apoptotic mitochondrial changes // inferred from direct assay /// 0009566 // fertilization // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009636 // response to toxic substance // inferred from direct assay /// 0009651 // response to salt stress // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0010248 // establishment or maintenance of transmembrane electrochemical gradient // inferred from direct assay /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030264 // nuclear fragmentation involved in apoptotic nuclear change // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0032469 // endoplasmic reticulum calcium ion homeostasis // traceable author statement /// 0032471 // negative regulation of endoplasmic reticulum calcium ion concentration // inferred from electronic annotation /// 0032976 // release of matrix enzymes from mitochondria // inferred from direct assay /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0033599 // regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034644 // cellular response to UV // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035234 // ectopic germ cell programmed cell death // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043281 // regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043496 // regulation of protein homodimerization activity // inferred from direct assay /// 0043497 // regulation of protein heterodimerization activity // inferred from physical interaction /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from direct assay /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from direct assay /// 0045136 // development of secondary sexual characteristics // inferred from electronic annotation /// 0046666 // retinal cell programmed cell death // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0048087 // positive regulation of developmental pigmentation // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0048515 // spermatid differentiation // inferred from electronic annotation /// 0048597 // post-embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0048872 // homeostasis of number of cells // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from direct assay /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from direct assay /// 0060011 // Sertoli cell proliferation // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0060058 // positive regulation of apoptotic process involved in mammary gland involution // inferred from electronic annotation /// 0060068 // vagina development // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from mutant phenotype /// 0070242 // thymocyte apoptotic process // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0097190 // apoptotic signaling pathway // inferred from direct assay /// 0097191 // extrinsic apoptotic signaling pathway // inferred from direct assay /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // not recorded /// 0097193 // intrinsic apoptotic signaling pathway // inferred from direct assay /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 0097296 // activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway // inferred from electronic annotation /// 1900103 // positive regulation of endoplasmic reticulum unfolded protein response // inferred from mutant phenotype /// 1901030 // positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway // traceable author statement /// 1902108 // regulation of mitochondrial membrane permeability involved in apoptotic process // inferred from electronic annotation /// 1902110 // positive regulation of mitochondrial membrane permeability involved in apoptotic process // inferred from electronic annotation /// 1902262 // apoptotic process involved in patterning of blood vessels // inferred from electronic annotation /// 1902263 // apoptotic process involved in embryonic digit morphogenesis // inferred from electronic annotation /// 1902512 // positive regulation of apoptotic DNA fragmentation // inferred from mutant phenotype /// 1990009 // retinal cell apoptotic process // inferred from mutant phenotype /// 1990117 // B cell receptor apoptotic signaling pathway // inferred from direct assay /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // not recorded /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005757 // mitochondrial permeability transition pore complex // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0046930 // pore complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097136 // Bcl-2 family protein complex // inferred from direct assay /// 0097144 // BAX complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from direct assay /// 0015267 // channel activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0051434 // BH3 domain binding // inferred from direct assay /// 0051434 // BH3 domain binding // inferred from physical interaction </td> <td> 18.27 </td> <td> 110.99 </td> <td> 0.51 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 215293_s_at </td> <td> 215293_s_at </td> <td> AL049261 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL049261.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564E053 (from clone DKFZp564E053). /FEA=mRNA /DB_XREF=gi:4500009 /UG=Hs.133968 FGF receptor activating protein 1 </td> <td> AL049261 </td> <td> post-GPI attachment to proteins 2 </td> <td> PGAP2 </td> <td> 27315 </td> <td> NM_001145438 /// NM_001256235 /// NM_001256236 /// NM_001256237 /// NM_001256238 /// NM_001256239 /// NM_001256240 /// NM_001283038 /// NM_001283039 /// NM_001283040 /// NM_014489 /// NR_027016 /// NR_027017 /// NR_027018 /// NR_045923 /// NR_045925 /// NR_045926 /// NR_045927 /// NR_045929 /// NR_104270 /// NR_104271 /// NR_104272 /// XM_006718181 /// XM_006718182 /// XM_006718183 /// XM_006718184 /// XM_006718185 /// XM_006718186 /// XM_006718187 /// XM_006718188 /// XM_006718189 /// XM_006718190 /// XM_006718191 /// XM_006718192 /// XM_006718193 </td> <td> 0006506 // GPI anchor biosynthetic process // inferred from sequence or structural similarity /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0042770 // signal transduction in response to DNA damage // inferred from electronic annotation /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 1902230 // negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from sequence or structural similarity </td> <td> -7.67 </td> <td> 97.29 </td> <td> -0.51 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 210046_s_at </td> <td> 210046_s_at </td> <td> U52144 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U52144.1 /DEF=Human isocitrate dehydrogenase mRNA, complete cds. /FEA=mRNA /PROD=isocitrate dehydrogenase /DB_XREF=gi:1277202 /UG=Hs.5337 isocitrate dehydrogenase 2 (NADP+), mitochondrial /FL=gb:U52144.1 </td> <td> U52144 </td> <td> isocitrate dehydrogenase 2 (NADP+), mitochondrial </td> <td> IDH2 </td> <td> 3418 </td> <td> NM_001289910 /// NM_001290114 /// NM_002168 </td> <td> 0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006097 // glyoxylate cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006102 // isocitrate metabolic process // inferred from sequence or structural similarity /// 0006103 // 2-oxoglutarate metabolic process // inferred from sequence or structural similarity /// 0008152 // metabolic process // non-traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement </td> <td> 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0004450 // isocitrate dehydrogenase (NADP+) activity // not recorded /// 0004450 // isocitrate dehydrogenase (NADP+) activity // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> -17.05 </td> <td> 313.10 </td> <td> -0.51 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216153_x_at </td> <td> 216153_x_at </td> <td> AK022897 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK022897.1 /DEF=Homo sapiens cDNA FLJ12835 fis, clone NT2RP2003165. /FEA=mRNA /DB_XREF=gi:10434555 /UG=Hs.306641 Homo sapiens cDNA FLJ12835 fis, clone NT2RP2003165 </td> <td> AK022897 </td> <td> reversion-inducing-cysteine-rich protein with kazal motifs </td> <td> RECK </td> <td> 8434 </td> <td> NM_021111 /// XM_006716879 </td> <td> 0001955 // blood vessel maturation // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0031225 // anchored component of membrane // inferred from electronic annotation </td> <td> 0004866 // endopeptidase inhibitor activity // inferred from direct assay /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008191 // metalloendopeptidase inhibitor activity // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation </td> <td> 13.73 </td> <td> 117.96 </td> <td> 0.51 </td> <td> 0.62 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 219855_at </td> <td> 219855_at </td> <td> NM_018159 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018159.1 /DEF=Homo sapiens hypothetical protein FLJ10628 (FLJ10628), mRNA. /FEA=mRNA /GEN=FLJ10628 /PROD=hypothetical protein FLJ10628 /DB_XREF=gi:8922558 /UG=Hs.200016 hypothetical protein FLJ10628 /FL=gb:NM_018159.1 </td> <td> NM_018159 </td> <td> nudix (nucleoside diphosphate linked moiety X)-type motif 11 </td> <td> NUDT11 </td> <td> 55190 </td> <td> NM_018159 </td> <td> 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052840 // inositol diphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052841 // inositol bisdiphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052842 // inositol diphosphate pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052843 // inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052844 // inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052845 // inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052846 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity // inferred from electronic annotation /// 0052847 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation /// 0052848 // inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation </td> <td> 15.50 </td> <td> 127.70 </td> <td> 0.51 </td> <td> 0.63 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 218085_at </td> <td> 218085_at </td> <td> NM_015961 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015961.1 /DEF=Homo sapiens CGI-34 protein (LOC51612), mRNA. /FEA=mRNA /GEN=LOC51612 /PROD=CGI-34 protein /DB_XREF=gi:7706273 /UG=Hs.36237 CGI-34 protein /FL=gb:AF275810.1 gb:AF132968.1 gb:NM_015961.1 </td> <td> NM_015961 </td> <td> charged multivesicular body protein 5 </td> <td> CHMP5 </td> <td> 51510 </td> <td> NM_001195536 /// NM_016410 </td> <td> 0001919 // regulation of receptor recycling // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 10.50 </td> <td> 152.60 </td> <td> 0.51 </td> <td> 0.63 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200807_s_at </td> <td> 200807_s_at </td> <td> NM_002156 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002156.1 /DEF=Homo sapiens heat shock 60kD protein 1 (chaperonin) (HSPD1), mRNA. /FEA=mRNA /GEN=HSPD1 /PROD=heat shock 60kD protein 1 (chaperonin) /DB_XREF=gi:4504520 /UG=Hs.79037 heat shock 60kD protein 1 (chaperonin) /FL=gb:BC002676.1 gb:BC003030.1 gb:M34664.1 gb:M22382.1 gb:NM_002156.1 </td> <td> NM_002156 </td> <td> heat shock 60kDa protein 1 (chaperonin) </td> <td> HSPD1 </td> <td> 3329 </td> <td> NM_002156 /// NM_199440 /// XM_005246518 </td> <td> 0002368 // B cell cytokine production // inferred from direct assay /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // inferred from direct assay /// 0002842 // positive regulation of T cell mediated immune response to tumor cell // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0006458 // 'de novo' protein folding // inferred from sequence or structural similarity /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032733 // positive regulation of interleukin-10 production // inferred from direct assay /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0042026 // protein refolding // inferred from direct assay /// 0042100 // B cell proliferation // inferred from direct assay /// 0042110 // T cell activation // inferred from direct assay /// 0042113 // B cell activation // inferred from direct assay /// 0043032 // positive regulation of macrophage activation // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0048291 // isotype switching to IgG isotypes // inferred from direct assay /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050870 // positive regulation of T cell activation // inferred from direct assay /// 0050870 // positive regulation of T cell activation // inferred from sequence or structural similarity /// 0051131 // chaperone-mediated protein complex assembly // inferred from sequence or structural similarity /// 0051604 // protein maturation // inferred from sequence or structural similarity </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // traceable author statement /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019907 // cyclin-dependent protein kinase activating kinase holoenzyme complex // inferred from direct assay /// 0030135 // coated vesicle // inferred from direct assay /// 0030141 // secretory granule // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0046696 // lipopolysaccharide receptor complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001530 // lipopolysaccharide binding // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003688 // DNA replication origin binding // inferred from sequence or structural similarity /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred by curator /// 0051082 // unfolded protein binding // inferred from sequence or structural similarity /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> 20.28 </td> <td> 1712.84 </td> <td> 0.51 </td> <td> 0.63 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 221641_s_at </td> <td> 221641_s_at </td> <td> AF241787 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF241787.1 /DEF=Homo sapiens CGI16-iso mRNA, complete cds. /FEA=mRNA /PROD=CGI16-iso /DB_XREF=gi:12005490 /UG=Hs.18625 Mitochondrial Acyl-CoA Thioesterase /FL=gb:AF241787.1 </td> <td> AF241787 </td> <td> acyl-CoA thioesterase 9 </td> <td> ACOT9 </td> <td> 23597 </td> <td> NM_001033583 /// NM_001037171 /// XM_005274470 /// XM_005274471 /// XM_005274472 </td> <td> 0006637 // acyl-CoA metabolic process // inferred from sequence or structural similarity </td> <td> 0005739 // mitochondrion // inferred from sequence or structural similarity </td> <td> 0003986 // acetyl-CoA hydrolase activity // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -42.12 </td> <td> 381.81 </td> <td> -0.51 </td> <td> 0.63 </td> <td> 0.69 </td> <td> -4.61 </td> </tr>
  <tr> <td> 205988_at </td> <td> 205988_at </td> <td> NM_003874 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003874.1 /DEF=Homo sapiens CD84 antigen (leukocyte antigen) (CD84), mRNA. /FEA=mRNA /GEN=CD84 /PROD=CD84 antigen (leukocyte antigen) /DB_XREF=gi:4502686 /UG=Hs.137548 CD84 antigen (leukocyte antigen) /FL=gb:U82988.1 gb:NM_003874.1 gb:AF054815.1 </td> <td> NM_003874 </td> <td> CD84 molecule </td> <td> CD84 </td> <td> 8832 </td> <td> NM_001184879 /// NM_001184881 /// NM_001184882 /// NM_003874 /// XR_241101 </td> <td> 0006952 // defense response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0050900 // leukocyte migration // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -7.80 </td> <td> 65.72 </td> <td> -0.51 </td> <td> 0.63 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 210519_s_at </td> <td> 210519_s_at </td> <td> BC000906 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000906.1 /DEF=Homo sapiens, clone MGC:5333, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:5333) /DB_XREF=gi:12654176 /UG=Hs.80706 diaphorase (NADHNADPH) (cytochrome b-5 reductase) /FL=gb:BC000906.1 </td> <td> BC000906 </td> <td> NAD(P)H dehydrogenase, quinone 1 </td> <td> NQO1 </td> <td> 1728 </td> <td> NM_000903 /// NM_001025433 /// NM_001025434 /// NM_001286137 </td> <td> 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006801 // superoxide metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006809 // nitric oxide biosynthetic process // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007271 // synaptic transmission, cholinergic // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0009636 // response to toxic substance // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019430 // removal of superoxide radicals // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003955 // NAD(P)H dehydrogenase (quinone) activity // inferred from electronic annotation /// 0004128 // cytochrome-b5 reductase activity, acting on NAD(P)H // traceable author statement /// 0004784 // superoxide dismutase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -40.47 </td> <td> 800.21 </td> <td> -0.51 </td> <td> 0.63 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 219544_at </td> <td> 219544_at </td> <td> NM_024808 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024808.1 /DEF=Homo sapiens hypothetical protein FLJ22624 (FLJ22624), mRNA. /FEA=mRNA /GEN=FLJ22624 /PROD=hypothetical protein FLJ22624 /DB_XREF=gi:13376190 /UG=Hs.166425 hypothetical protein FLJ22624 /FL=gb:NM_024808.1 </td> <td> NM_024808 </td> <td> bora, aurora kinase A activator </td> <td> BORA </td> <td> 79866 </td> <td> NM_001286746 /// NM_001286747 /// NM_024808 /// XM_006719868 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007088 // regulation of mitosis // inferred from mutant phenotype /// 0032880 // regulation of protein localization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0060236 // regulation of mitotic spindle organization // inferred from mutant phenotype </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction </td> <td> 7.25 </td> <td> 80.30 </td> <td> 0.51 </td> <td> 0.63 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201292_at </td> <td> 201292_at </td> <td> AL561834 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL561834 /FEA=EST /DB_XREF=gi:12909658 /DB_XREF=est:AL561834 /CLONE=CS0DB005YC15 (3 prime) /UG=Hs.156346 topoisomerase (DNA) II alpha (170kD) /FL=gb:J04088.1 gb:NM_001067.1 </td> <td> AL561834 </td> <td> topoisomerase (DNA) II alpha 170kDa </td> <td> TOP2A </td> <td> 7153 </td> <td> NM_001067 /// XM_005257632 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0000712 // resolution of meiotic recombination intermediates // not recorded /// 0000819 // sister chromatid segregation // not recorded /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006260 // DNA replication // non-traceable author statement /// 0006261 // DNA-dependent DNA replication //  /// 0006265 // DNA topological change // inferred from direct assay /// 0006266 // DNA ligation // inferred from direct assay /// 0006268 // DNA unwinding involved in DNA replication // not recorded /// 0006281 // DNA repair // non-traceable author statement /// 0006312 // mitotic recombination // not recorded /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0030261 // chromosome condensation // inferred from electronic annotation /// 0030263 // apoptotic chromosome condensation // inferred from direct assay /// 0040016 // embryonic cleavage // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0044774 // mitotic DNA integrity checkpoint // not recorded /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype /// 0045870 // positive regulation of single stranded viral RNA replication via double stranded DNA intermediate // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement </td> <td> 0000228 // nuclear chromosome // inferred from direct assay /// 0000793 // condensed chromosome // inferred from electronic annotation /// 0000795 // synaptonemal complex //  /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005814 // centriole // inferred from direct assay /// 0009295 // nucleoid // not recorded /// 0009330 // DNA topoisomerase complex (ATP-hydrolyzing) // inferred from direct assay /// 0019035 // viral integration complex // non-traceable author statement /// 0043234 // protein complex // inferred from physical interaction </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from direct assay /// 0003916 // DNA topoisomerase activity // inferred from electronic annotation /// 0003918 // DNA topoisomerase type II (ATP-hydrolyzing) activity // inferred from direct assay /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008144 // drug binding // inferred from direct assay /// 0008301 // DNA binding, bending // inferred from direct assay /// 0016853 // isomerase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from mutant phenotype /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> 15.18 </td> <td> 210.09 </td> <td> 0.51 </td> <td> 0.63 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 211047_x_at </td> <td> 211047_x_at </td> <td> BC006337 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006337.1 /DEF=Homo sapiens, clone MGC:12798, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:12798) /DB_XREF=gi:13623468 /FL=gb:BC006337.1 </td> <td> BC006337 </td> <td> adaptor-related protein complex 2, sigma 1 subunit </td> <td> AP2S1 </td> <td> 1175 </td> <td> NM_004069 /// NM_021575 /// XM_005258499 /// XM_005258500 /// XM_006723004 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0030100 // regulation of endocytosis // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048268 // clathrin coat assembly // traceable author statement /// 0050690 // regulation of defense response to virus by virus // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // traceable author statement /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0008565 // protein transporter activity // non-traceable author statement </td> <td> 41.53 </td> <td> 1251.56 </td> <td> 0.51 </td> <td> 0.63 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208672_s_at </td> <td> 208672_s_at </td> <td> BC000914 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000914.1 /DEF=Homo sapiens, splicing factor, arginineserine-rich 3, clone MGC:5205, mRNA, complete cds.  /FEA=mRNA /PROD=splicing factor, arginineserine-rich 3 /DB_XREF=gi:12654192 /UG=Hs.167460 splicing factor, arginineserine-rich 3 /FL=gb:BC000914.1 gb:AF107405.1 </td> <td> BC000914 </td> <td> serine/arginine-rich splicing factor 3 </td> <td> SRSF3 </td> <td> 6428 </td> <td> NM_003017 /// NR_036610 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 17.27 </td> <td> 924.96 </td> <td> 0.51 </td> <td> 0.63 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 204185_x_at </td> <td> 204185_x_at </td> <td> NM_005038 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005038.1 /DEF=Homo sapiens peptidylprolyl isomerase D (cyclophilin D) (PPID), mRNA.  /FEA=mRNA /GEN=PPID /PROD=peptidylprolyl isomerase D (cyclophilin D) /DB_XREF=gi:4826931 /UG=Hs.143482 peptidylprolyl isomerase D (cyclophilin D) /FL=gb:L11667.1 gb:NM_005038.1 </td> <td> NM_005038 </td> <td> peptidylprolyl isomerase D </td> <td> PPID </td> <td> 5481 </td> <td> NM_005038 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0019076 // viral release from host cell // traceable author statement /// 0034389 // lipid particle organization // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from mutant phenotype /// 0061077 // chaperone-mediated protein folding // inferred from direct assay /// 0071492 // cellular response to UV-A // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0016018 // cyclosporin A binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from sequence or structural similarity /// 0030544 // Hsp70 protein binding // inferred from sequence or structural similarity /// 0031072 // heat shock protein binding // inferred from physical interaction /// 0042277 // peptide binding // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from direct assay </td> <td> 8.48 </td> <td> 233.69 </td> <td> 0.50 </td> <td> 0.63 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 212004_at </td> <td> 212004_at </td> <td> AL050028 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL050028.1 /DEF=Homo sapiens mRNA; cDNA DKFZp566C0424 (from clone DKFZp566C0424); partial cds.  /FEA=mRNA /GEN=DKFZp566C0424 /PROD=hypothetical protein /DB_XREF=gi:4884267 /UG=Hs.226770 DKFZP566C0424 protein </td> <td> AL050028 </td> <td> SUZ RNA binding domain containing 1 </td> <td> SZRD1 </td> <td> 26099 </td> <td> NM_001114600 /// NM_001271869 /// NR_073500 /// NR_073501 /// NR_073502 /// NR_073503 </td> <td>  </td> <td>  </td> <td>  </td> <td> -13.08 </td> <td> 232.21 </td> <td> -0.50 </td> <td> 0.63 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209537_at </td> <td> 209537_at </td> <td> AF000416 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF000416.1 /DEF=Homo sapiens EXT-like protein 2 (EXTL2) mRNA, complete cds. /FEA=mRNA /GEN=EXTL2 /PROD=EXT-like protein 2 /DB_XREF=gi:2895061 /UG=Hs.61152 exostoses (multiple)-like 2 /FL=gb:AB009284.1 gb:AF000416.1 </td> <td> AF000416 </td> <td> exostosin-like glycosyltransferase 2 </td> <td> EXTL2 </td> <td> 2135 </td> <td> NM_001033025 /// NM_001261440 /// NM_001261441 /// NM_001261442 /// NM_001439 /// NR_048570 /// XM_005270621 /// XM_005270622 </td> <td> 0006044 // N-acetylglucosamine metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0019276 // UDP-N-acetylgalactosamine metabolic process // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031227 // intrinsic component of endoplasmic reticulum membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001888 // glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0035248 // alpha-1,4-N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -13.13 </td> <td> 278.66 </td> <td> -0.50 </td> <td> 0.63 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202246_s_at </td> <td> 202246_s_at </td> <td> NM_000075 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000075.1 /DEF=Homo sapiens cyclin-dependent kinase 4 (CDK4), mRNA. /FEA=mRNA /GEN=CDK4 /PROD=cyclin-dependent kinase 4 /DB_XREF=gi:4502734 /UG=Hs.95577 cyclin-dependent kinase 4 /FL=gb:BC003644.1 gb:U79269.1 gb:NM_000075.1 gb:M14505.1 </td> <td> NM_000075 </td> <td> cyclin-dependent kinase 4 </td> <td> CDK4 </td> <td> 1019 </td> <td> NM_000075 /// NM_052984 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010288 // response to lead ion // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from mutant phenotype /// 0010971 // positive regulation of G2/M transition of mitotic cell cycle // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0033574 // response to testosterone // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from genetic interaction /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0045793 // positive regulation of cell size // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0071157 // negative regulation of cell cycle arrest // inferred from direct assay </td> <td> 0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030332 // cyclin binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> -16.87 </td> <td> 505.71 </td> <td> -0.50 </td> <td> 0.63 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208634_s_at </td> <td> 208634_s_at </td> <td> AB029290 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB029290.1 /DEF=Homo sapiens mRNA for actin binding protein ABP620, complete cds. /FEA=mRNA /GEN=abp620 /PROD=actin binding protein ABP620 /DB_XREF=gi:5821433 /UG=Hs.108258 actin binding protein; macrophin (microfilament and actin filament cross-linker protein) /FL=gb:AB029290.1 </td> <td> AB029290 </td> <td> microtubule-actin crosslinking factor 1 </td> <td> MACF1 </td> <td> 23499 </td> <td> NM_012090 /// NM_033044 /// XM_005270694 /// XM_005270695 /// XM_005270696 /// XM_005270697 /// XM_005270698 /// XM_005270700 /// XM_006710519 /// XM_006710520 /// XM_006710521 /// XM_006710522 /// XM_006710523 /// XM_006710524 /// XM_006710525 /// XM_006710526 /// XM_006710527 /// XM_006710528 /// XM_006710529 /// XM_006710530 /// XM_006710531 /// XM_006710532 /// XM_006710533 /// XM_006710534 /// XM_006710535 /// XM_006710536 /// XM_006710537 /// XM_006710538 /// XM_006710539 /// XM_006710540 </td> <td> 0001707 // mesoderm formation // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006620 // posttranslational protein targeting to membrane // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0010632 // regulation of epithelial cell migration // inferred from sequence or structural similarity /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay /// 0051893 // regulation of focal adhesion assembly // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // non-traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // non-traceable author statement </td> <td> 44.45 </td> <td> 731.88 </td> <td> 0.50 </td> <td> 0.63 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 41160_at </td> <td> 41160_at </td> <td> AC005943 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AC005943:Homo sapiens chromosome 19, cosmid R30538 /cds=(22,897) /gb=AC005943 /gi=3850563 /ug=Hs.178728 /len=2559 </td> <td> AC005943 </td> <td> methyl-CpG binding domain protein 3 </td> <td> MBD3 </td> <td> 53615 </td> <td> NM_001281453 /// NM_001281454 /// NM_003926 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0009888 // tissue development // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from direct assay </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016581 // NuRD complex // non-traceable author statement /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008327 // methyl-CpG binding // inferred from direct assay /// 0031492 // nucleosomal DNA binding // inferred from direct assay </td> <td> 15.10 </td> <td> 213.10 </td> <td> 0.50 </td> <td> 0.63 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200786_at </td> <td> 200786_at </td> <td> NM_002799 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002799.1 /DEF=Homo sapiens proteasome (prosome, macropain) subunit, beta type, 7 (PSMB7), mRNA.  /FEA=mRNA /GEN=PSMB7 /PROD=proteasome (prosome, macropain) subunit, betatype, 7 /DB_XREF=gi:4506202 /UG=Hs.118065 proteasome (prosome, macropain) subunit, beta type, 7 /FL=gb:BC000509.1 gb:D38048.1 gb:NM_002799.1 </td> <td> NM_002799 </td> <td> proteasome (prosome, macropain) subunit, beta type, 7 </td> <td> PSMB7 </td> <td> 5695 </td> <td> NM_002799 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 25.92 </td> <td> 666.56 </td> <td> 0.49 </td> <td> 0.64 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209678_s_at </td> <td> 209678_s_at </td> <td> L18964 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L18964.1 /DEF=Human protein kinase C iota isoform (PRKCI) mRNA, complete cds. /FEA=mRNA /GEN=PRKCI /PROD=protein kinase C iota /DB_XREF=gi:432273 /UG=Hs.1904 protein kinase C, iota /FL=gb:L18964.1 gb:NM_002740.1 gb:L33881.1 </td> <td> L18964 </td> <td> protein kinase C, iota </td> <td> PRKCI </td> <td> 5584 </td> <td> NM_002740 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0006612 // protein targeting to membrane // non-traceable author statement /// 0007010 // cytoskeleton organization // non-traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0034351 // negative regulation of glial cell apoptotic process // inferred from mutant phenotype /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035089 // establishment of apical/basal cell polarity // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042462 // eye photoreceptor cell development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0045197 // establishment or maintenance of epithelial cell apical/basal polarity // traceable author statement /// 0045216 // cell-cell junction organization // inferred from mutant phenotype /// 0045216 // cell-cell junction organization // traceable author statement /// 0046326 // positive regulation of glucose import // inferred from sequence or structural similarity /// 0046903 // secretion // non-traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048194 // Golgi vesicle budding // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0060252 // positive regulation of glial cell proliferation // inferred from mutant phenotype /// 0061024 // membrane organization // non-traceable author statement /// 0070555 // response to interleukin-1 // inferred from electronic annotation /// 0070830 // tight junction assembly // traceable author statement /// 0090004 // positive regulation of establishment of protein localization to plasma membrane // inferred from sequence or structural similarity /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from mutant phenotype </td> <td> 0000133 // polarisome // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045171 // intercellular bridge // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004697 // protein kinase C activity // inferred from sequence or structural similarity /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement /// 0005543 // phospholipid binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -13.00 </td> <td> 217.60 </td> <td> -0.49 </td> <td> 0.64 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 203755_at </td> <td> 203755_at </td> <td> NM_001211 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001211.2 /DEF=Homo sapiens budding uninhibited by benzimidazoles 1 (yeast homolog), beta (BUB1B), mRNA.  /FEA=mRNA /GEN=BUB1B /PROD=budding uninhibited by benzimidazoles 1 (yeasthomolog), beta /DB_XREF=gi:5729749 /UG=Hs.36708 budding uninhibited by benzimidazoles 1 (yeast homolog), beta /FL=gb:AF053306.1 gb:AF035933.1 gb:AF068760.1 gb:AF046918.1 gb:AF107297.1 gb:AF046079.2 gb:NM_001211.2 </td> <td> NM_001211 </td> <td> BUB1 mitotic checkpoint serine/threonine kinase B </td> <td> BUB1B </td> <td> 701 </td> <td> NM_001211 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // non-traceable author statement /// 0007051 // spindle organization // non-traceable author statement /// 0007067 // mitotic nuclear division // non-traceable author statement /// 0007091 // metaphase/anaphase transition of mitotic cell cycle // inferred from electronic annotation /// 0007093 // mitotic cell cycle checkpoint // traceable author statement /// 0007094 // mitotic spindle assembly checkpoint // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034501 // protein localization to kinetochore // inferred from physical interaction /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0071459 // protein localization to chromosome, centromeric region // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // non-traceable author statement /// 0000776 // kinetochore // traceable author statement /// 0000777 // condensed chromosome kinetochore // inferred from direct assay /// 0000778 // condensed nuclear chromosome kinetochore // inferred from electronic annotation /// 0000940 // condensed chromosome outer kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005680 // anaphase-promoting complex // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0051233 // spindle midzone // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> 8.17 </td> <td> 138.89 </td> <td> 0.49 </td> <td> 0.64 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 214328_s_at </td> <td> 214328_s_at </td> <td> R01140 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:R01140 /FEA=EST /DB_XREF=gi:750876 /DB_XREF=est:ye88e02.s1 /CLONE=IMAGE:124826 /UG=Hs.289088 heat shock 90kD protein 1, alpha </td> <td> R01140 </td> <td> heat shock protein 90kDa alpha (cytosolic), class A member 1 </td> <td> HSP90AA1 </td> <td> 3320 </td> <td> NM_001017963 /// NM_005348 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0003009 // skeletal muscle contraction // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0006839 // mitochondrial transport // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009651 // response to salt stress // inferred from electronic annotation /// 0010592 // positive regulation of lamellipodium assembly // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0042026 // protein refolding // traceable author statement /// 0043627 // response to estrogen // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045040 // protein import into mitochondrial outer membrane // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045793 // positive regulation of cell size // inferred from electronic annotation /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051131 // chaperone-mediated protein complex assembly // inferred from direct assay /// 0060452 // positive regulation of cardiac muscle contraction // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071682 // endocytic vesicle lumen // traceable author statement </td> <td> 0000166 // nucleotide binding // traceable author statement /// 0002134 // UTP binding // inferred from electronic annotation /// 0002135 // CTP binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017098 // sulfonylurea receptor binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0023026 // MHC class II protein complex binding // inferred from direct assay /// 0030235 // nitric-oxide synthase regulator activity // inferred from direct assay /// 0030911 // TPR domain binding // inferred from direct assay /// 0030911 // TPR domain binding // traceable author statement /// 0032564 // dATP binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // traceable author statement /// 0044325 // ion channel binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation </td> <td> -86.13 </td> <td> 2207.49 </td> <td> -0.49 </td> <td> 0.64 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 219735_s_at </td> <td> 219735_s_at </td> <td> NM_014553 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014553.1 /DEF=Homo sapiens LBP protein (LBP-9), mRNA. /FEA=mRNA /GEN=LBP-9 /PROD=LBP protein /DB_XREF=gi:7657298 /UG=Hs.114747 LBP protein; likely ortholog of mouse CRTR-1 /FL=gb:AF198488.1 gb:NM_014553.1 </td> <td> NM_014553 </td> <td> transcription factor CP2-like 1 </td> <td> TFCP2L1 </td> <td> 29842 </td> <td> NM_014553 /// XM_005263651 /// XM_005263652 /// XM_006712459 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0002070 // epithelial cell maturation // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006694 // steroid biosynthetic process // traceable author statement /// 0007028 // cytoplasm organization // inferred from electronic annotation /// 0007431 // salivary gland development // inferred from electronic annotation /// 0007565 // female pregnancy // traceable author statement /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0045927 // positive regulation of growth // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 7.02 </td> <td> 46.49 </td> <td> 0.49 </td> <td> 0.64 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 215600_x_at </td> <td> 215600_x_at </td> <td> AK022174 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK022174.1 /DEF=Homo sapiens cDNA FLJ12112 fis, clone MAMMA1000043. /FEA=mRNA /DB_XREF=gi:10433510 /UG=Hs.288793 Homo sapiens cDNA FLJ12112 fis, clone MAMMA1000043 </td> <td> AK022174 </td> <td> F-box and WD repeat domain containing 12 </td> <td> FBXW12 </td> <td> 285231 </td> <td> NM_001159927 /// NM_001159929 /// NM_207102 /// XR_245120 </td> <td>  </td> <td>  </td> <td>  </td> <td> 8.48 </td> <td> 57.94 </td> <td> 0.49 </td> <td> 0.64 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216505_x_at </td> <td> 216505_x_at </td> <td> AL118502 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL118502 /DEF=Human DNA sequence from clone RP11-371L19 on chromosome 20 Contains a novel gene, a gene similar to the gene for ribosomal protein S10, ESTs, STSs, GSSs and CpG islands /FEA=mRNA_3 /DB_XREF=gi:8894621 /UG=Hs.284299 Human DNA sequence from clone RP11-371L19 on chromosome 20 Contains a novel gene, a gene similar to the gene for ribosomal protein S10, ESTs, STSs, GSSs and CpG islands </td> <td> AL118502 </td> <td>  </td> <td> RPS10L </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -15.98 </td> <td> 337.26 </td> <td> -0.49 </td> <td> 0.64 </td> <td> 0.70 </td> <td> -4.61 </td> </tr>
  <tr> <td> 219423_x_at </td> <td> 219423_x_at </td> <td> NM_003790 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003790.1 /DEF=Homo sapiens tumor necrosis factor receptor superfamily, member 12 (translocating chain-association membrane protein) (TNFRSF12), mRNA.  /FEA=mRNA /GEN=TNFRSF12 /PROD=tumor necrosis factor receptor superfamily,member 12 /DB_XREF=gi:4507568 /UG=Hs.180338 tumor necrosis factor receptor superfamily, member 12 (translocating chain-association membrane protein) /FL=gb:U72763.1 gb:U74611.1 gb:U78029.1 gb:U94501.1 gb:U94502.1 gb:NM_003790.1 </td> <td> NM_003790 </td> <td> tumor necrosis factor receptor superfamily, member 25 </td> <td> TNFRSF25 </td> <td> 8718 </td> <td> NM_001039664 /// NM_003790 /// NM_148965 /// NM_148966 /// NM_148967 /// NM_148968 /// NM_148969 /// NM_148970 /// NM_148974 </td> <td> 0006915 // apoptotic process // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // traceable author statement /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004872 // receptor activity // non-traceable author statement /// 0005031 // tumor necrosis factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 8.10 </td> <td> 65.17 </td> <td> 0.49 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201578_at </td> <td> 201578_at </td> <td> NM_005397 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005397.1 /DEF=Homo sapiens podocalyxin-like (PODXL), mRNA. /FEA=mRNA /GEN=PODXL /PROD=podocalyxin-like /DB_XREF=gi:4885556 /UG=Hs.16426 podocalyxin-like /FL=gb:U97519.1 gb:NM_005397.1 </td> <td> NM_005397 </td> <td> podocalyxin-like </td> <td> PODXL </td> <td> 5420 </td> <td> NM_001018111 /// NM_005397 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // inferred from sequence or structural similarity /// 0016477 // cell migration // inferred from sequence or structural similarity /// 0022408 // negative regulation of cell-cell adhesion // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0032534 // regulation of microvillus assembly // inferred from sequence or structural similarity /// 0033634 // positive regulation of cell-cell adhesion mediated by integrin // inferred from direct assay /// 0050900 // leukocyte migration // inferred from electronic annotation /// 0072015 // glomerular visceral epithelial cell development // inferred from sequence or structural similarity /// 0072175 // epithelial tube formation // inferred from sequence or structural similarity </td> <td> 0001726 // ruffle // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from direct assay /// 0030175 // filopodium // inferred from direct assay /// 0031528 // microvillus membrane // inferred from sequence or structural similarity /// 0036057 // slit diaphragm // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 47.52 </td> <td> 991.84 </td> <td> 0.49 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200627_at </td> <td> 200627_at </td> <td> BC003005 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003005.1 /DEF=Homo sapiens, unactive progesterone receptor, 23 kD, clone MGC:4004, mRNA, complete cds.  /FEA=mRNA /PROD=unactive progesterone receptor, 23 kD /DB_XREF=gi:12804292 /UG=Hs.278270 unactive progesterone receptor, 23 kD /FL=gb:BC003005.1 gb:L24804.1 gb:NM_006601.1 </td> <td> BC003005 </td> <td> prostaglandin E synthase 3 (cytosolic) </td> <td> PTGES3 </td> <td> 10728 </td> <td> NM_001282601 /// NM_001282602 /// NM_001282603 /// NM_001282604 /// NM_001282605 /// NM_006601 /// NR_104219 /// XM_005268576 /// XM_006719199 /// XR_245889 /// XR_429072 </td> <td> 0000723 // telomere maintenance // traceable author statement /// 0001516 // prostaglandin biosynthetic process // inferred from direct assay /// 0006278 // RNA-dependent DNA replication // inferred from direct assay /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0019369 // arachidonic acid metabolic process // traceable author statement /// 0019371 // cyclooxygenase pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0070389 // chaperone cofactor-dependent protein refolding // inferred from direct assay </td> <td> 0000781 // chromosome, telomeric region // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005697 // telomerase holoenzyme complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003720 // telomerase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation /// 0050220 // prostaglandin-E synthase activity // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from direct assay </td> <td> -27.80 </td> <td> 1225.22 </td> <td> -0.49 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208637_x_at </td> <td> 208637_x_at </td> <td> BC003576 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003576.1 /DEF=Homo sapiens, actinin, alpha 1, clone MGC:2358, mRNA, complete cds. /FEA=mRNA /PROD=actinin, alpha 1 /DB_XREF=gi:13097755 /UG=Hs.119000 actinin, alpha 1 /FL=gb:NM_001102.2 gb:BC003576.1 </td> <td> BC003576 </td> <td> actinin, alpha 1 </td> <td> ACTN1 </td> <td> 87 </td> <td> NM_001102 /// NM_001130004 /// NM_001130005 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0048041 // focal adhesion assembly // inferred from mutant phenotype /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051271 // negative regulation of cellular component movement // inferred from mutant phenotype /// 0051764 // actin crosslink formation // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from mutant phenotype /// 0016020 // membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031143 // pseudopodium // traceable author statement /// 0042995 // cell projection // inferred from direct assay /// 0043197 // dendritic spine // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017166 // vinculin binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation </td> <td> 23.97 </td> <td> 538.89 </td> <td> 0.49 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201975_at </td> <td> 201975_at </td> <td> NM_002956 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002956.1 /DEF=Homo sapiens restin (Reed-Steinberg cell-expressed intermediate filament-associated protein) (RSN), mRNA.  /FEA=mRNA /GEN=RSN /PROD=restin (Reed-Steinberg cell-expressedintermediate filament-associated protein) /DB_XREF=gi:4506750 /UG=Hs.31638 restin (Reed-Steinberg cell-expressed intermediate filament-associated protein) /FL=gb:NM_002956.1 </td> <td> NM_002956 </td> <td> CAP-GLY domain containing linker protein 1 </td> <td> CLIP1 </td> <td> 6249 </td> <td> NM_001247997 /// NM_002956 /// NM_198240 /// XM_005253593 /// XM_005253594 /// XM_005253595 /// XM_006719551 /// XM_006719552 /// XM_006719553 /// XM_006719554 /// XM_006719555 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0001578 // microtubule bundle formation // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007067 // mitotic nuclear division // traceable author statement /// 0031116 // positive regulation of microtubule polymerization // inferred from mutant phenotype </td> <td> 0000776 // kinetochore // traceable author statement /// 0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from mutant phenotype /// 0005874 // microtubule // inferred from sequence or structural similarity /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from mutant phenotype /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0035371 // microtubule plus-end // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0044354 // macropinosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0015631 // tubulin binding // inferred from direct assay /// 0042803 // protein homodimerization activity // traceable author statement /// 0046872 // metal ion binding // non-traceable author statement /// 0051010 // microtubule plus-end binding // inferred from direct assay </td> <td> 10.20 </td> <td> 144.70 </td> <td> 0.49 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 206445_s_at </td> <td> 206445_s_at </td> <td> NM_001536 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001536.1 /DEF=Homo sapiens HMT1 (hnRNP methyltransferase, S. cerevisiae)-like 2 (HRMT1L2), mRNA.  /FEA=mRNA /GEN=HRMT1L2 /PROD=HMT1 (hnRNP methyltransferase, S.cerevisiae)-like 2 /DB_XREF=gi:4504496 /UG=Hs.20521 HMT1 (hnRNP methyltransferase, S. cerevisiae)-like 2 /FL=gb:D66904.1 gb:NM_001536.1 </td> <td> NM_001536 </td> <td> protein arginine methyltransferase 1 </td> <td> PRMT1 </td> <td> 3276 </td> <td> NM_001207042 /// NM_001536 /// NM_198318 /// NM_198319 /// NR_033397 /// XM_005258842 /// XM_005258844 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // not recorded /// 0006479 // protein methylation // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016571 // histone methylation // inferred from direct assay /// 0018216 // peptidyl-arginine methylation // inferred from direct assay /// 0019919 // peptidyl-arginine methylation, to asymmetrical-dimethyl arginine // not recorded /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0034969 // histone arginine methylation // inferred from electronic annotation /// 0035246 // peptidyl-arginine N-methylation // inferred from electronic annotation /// 0035247 // peptidyl-arginine omega-N-methylation // inferred from electronic annotation /// 0043985 // histone H4-R3 methylation // inferred from direct assay /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // not recorded /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // traceable author statement /// 0008170 // N-methyltransferase activity // inferred from direct assay /// 0008170 // N-methyltransferase activity // inferred from mutant phenotype /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0008469 // histone-arginine N-methyltransferase activity // inferred from electronic annotation /// 0016274 // protein-arginine N-methyltransferase activity // inferred from electronic annotation /// 0016275 // [cytochrome c]-arginine N-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030519 // snoRNP binding // inferred from electronic annotation /// 0035241 // protein-arginine omega-N monomethyltransferase activity // inferred from electronic annotation /// 0035242 // protein-arginine omega-N asymmetric methyltransferase activity // not recorded /// 0042054 // histone methyltransferase activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0044020 // histone methyltransferase activity (H4-R3 specific) // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 30.77 </td> <td> 730.99 </td> <td> 0.49 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 214351_x_at </td> <td> 214351_x_at </td> <td> AA789278 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA789278 /FEA=EST /DB_XREF=gi:2849398 /DB_XREF=est:aj28b10.s1 /CLONE=1391611 /UG=Hs.180842 ribosomal protein L13 </td> <td> AA789278 </td> <td> ribosomal protein L13 /// small nucleolar RNA, C/D box 68 </td> <td> RPL13 /// SNORD68 </td> <td> 6137 /// 606500 </td> <td> NM_000977 /// NM_001243130 /// NM_001243131 /// NM_033251 /// NR_002450 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022626 // cytosolic ribosome // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -115.48 </td> <td> 1776.41 </td> <td> -0.49 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201913_s_at </td> <td> 201913_s_at </td> <td> NM_025233 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025233.1 /DEF=Homo sapiens nucleotide binding protein (NBP), mRNA. /FEA=mRNA /GEN=NBP /PROD=nucleotide binding protein /DB_XREF=gi:13376837 /UG=Hs.296422 nucleotide binding protein /FL=gb:NM_025233.1 gb:AF208536.1 </td> <td> NM_025233 </td> <td> CoA synthase </td> <td> COASY </td> <td> 80347 </td> <td> NM_001042529 /// NM_001042530 /// NM_001042531 /// NM_001042532 /// NM_025233 /// XM_006722116 /// XR_429926 </td> <td> 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009108 // coenzyme biosynthetic process // traceable author statement /// 0015937 // coenzyme A biosynthetic process // inferred from direct assay /// 0015937 // coenzyme A biosynthetic process // inferred from electronic annotation /// 0015937 // coenzyme A biosynthetic process // traceable author statement /// 0015939 // pantothenate metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004140 // dephospho-CoA kinase activity // inferred from direct assay /// 0004595 // pantetheine-phosphate adenylyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation </td> <td> 8.57 </td> <td> 139.24 </td> <td> 0.49 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 221943_x_at </td> <td> 221943_x_at </td> <td> AW303136 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW303136 /FEA=EST /DB_XREF=gi:6712816 /DB_XREF=est:xr59c08.x1 /CLONE=IMAGE:2764430 /UG=Hs.2017 ribosomal protein L38 </td> <td> AW303136 </td> <td> ribosomal protein L38 </td> <td> RPL38 </td> <td> 6169 </td> <td> NM_000999 /// NM_001035258 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0034463 // 90S preribosome assembly // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048318 // axial mesoderm development // inferred from electronic annotation </td> <td> 0005829 // cytosol // traceable author statement /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0033291 // eukaryotic 80S initiation complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement </td> <td> 51.95 </td> <td> 599.55 </td> <td> 0.49 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208074_s_at </td> <td> 208074_s_at </td> <td> NM_021575 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021575.1 /DEF=Homo sapiens adaptor-related protein complex 2, sigma 1 subunit (AP2S1), transcript variant AP17delta, mRNA.  /FEA=mRNA /GEN=AP2S1 /PROD=adaptor-related protein complex 2, sigma 1subunit, isoform AP17delta /DB_XREF=gi:11038642 /UG=Hs.119591 adaptor-related protein complex 2, sigma 1 subunit /FL=gb:NM_021575.1 </td> <td> NM_021575 </td> <td> adaptor-related protein complex 2, sigma 1 subunit </td> <td> AP2S1 </td> <td> 1175 </td> <td> NM_004069 /// NM_021575 /// XM_005258499 /// XM_005258500 /// XM_006723004 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0030100 // regulation of endocytosis // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048268 // clathrin coat assembly // traceable author statement /// 0050690 // regulation of defense response to virus by virus // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // traceable author statement /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0008565 // protein transporter activity // non-traceable author statement </td> <td> 36.40 </td> <td> 726.62 </td> <td> 0.49 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208836_at </td> <td> 208836_at </td> <td> U51478 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U51478.1 /DEF=Human sodiumpotassium-transporting ATPase beta-3 subunit mRNA, complete cds.  /FEA=mRNA /PROD=sodiumpotassium-transporting ATPase beta-3subunit /DB_XREF=gi:1522634 /UG=Hs.76941 ATPase, Na+K+ transporting, beta 3 polypeptide /FL=gb:U51478.1 gb:NM_001679.1 </td> <td> U51478 </td> <td> ATPase, Na+/K+ transporting, beta 3 polypeptide </td> <td> ATP1B3 </td> <td> 483 </td> <td> NM_001679 </td> <td> 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030001 // metal ion transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005890 // sodium:potassium-exchanging ATPase complex // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005391 // sodium:potassium-exchanging ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 35.98 </td> <td> 1276.99 </td> <td> 0.48 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 221419_s_at </td> <td> 221419_s_at </td> <td> NM_013307 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013307.1 /DEF=Homo sapiens non-functional folate binding protein (HSAF000381), mRNA.  /FEA=CDS /GEN=HSAF000381 /PROD=non-functional folate binding protein /DB_XREF=gi:7019412 /FL=gb:NM_013307.1 </td> <td> NM_013307 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 27.38 </td> <td> 442.81 </td> <td> 0.48 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208946_s_at </td> <td> 208946_s_at </td> <td> AF139131 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF139131.1 /DEF=Homo sapiens beclin 1 (BECN1) mRNA, complete cds. /FEA=mRNA /GEN=BECN1 /PROD=beclin 1 /DB_XREF=gi:4680380 /UG=Hs.12272 beclin 1 (coiled-coil, myosin-like BCL2-interacting protein) /FL=gb:AF077301.1 gb:NM_003766.1 gb:AF139131.1 </td> <td> AF139131 </td> <td> beclin 1, autophagy related </td> <td> BECN1 </td> <td> 8678 </td> <td> NM_003766 /// XM_005257758 /// XM_005257759 /// XM_005257760 </td> <td> 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016239 // positive regulation of macroautophagy // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0048666 // neuron development // inferred from electronic annotation /// 0050435 // beta-amyloid metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0051707 // response to other organism // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0071275 // cellular response to aluminum ion // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation </td> <td> -8.22 </td> <td> 235.24 </td> <td> -0.48 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200975_at </td> <td> 200975_at </td> <td> NM_000310 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000310.1 /DEF=Homo sapiens palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) (PPT1), mRNA.  /FEA=mRNA /GEN=PPT1 /PROD=palmitoyl-protein thioesterase 1(ceroid-lipofuscinosis, neuronal 1, infantile) /DB_XREF=gi:4506030 /UG=Hs.3873 palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) /FL=gb:U44772.1 gb:NM_000310.1 </td> <td> NM_000310 </td> <td> palmitoyl-protein thioesterase 1 </td> <td> PPT1 </td> <td> 5538 </td> <td> NM_000310 /// NM_001142604 /// XM_005271007 /// XM_005271008 </td> <td> 0002084 // protein depalmitoylation // inferred from direct assay /// 0002084 // protein depalmitoylation // inferred from sequence or structural similarity /// 0006309 // apoptotic DNA fragmentation // inferred from direct assay /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from mutant phenotype /// 0006907 // pinocytosis // inferred from mutant phenotype /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007042 // lysosomal lumen acidification // inferred from mutant phenotype /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0007420 // brain development // inferred from mutant phenotype /// 0007601 // visual perception // inferred from electronic annotation /// 0007625 // grooming behavior // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008306 // associative learning // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0016042 // lipid catabolic process // inferred from direct assay /// 0030149 // sphingolipid catabolic process // traceable author statement /// 0030163 // protein catabolic process // non-traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0031579 // membrane raft organization // inferred from mutant phenotype /// 0032429 // regulation of phospholipase A2 activity // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from mutant phenotype /// 0044257 // cellular protein catabolic process // inferred from electronic annotation /// 0044265 // cellular macromolecule catabolic process // inferred from electronic annotation /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from mutant phenotype /// 0048549 // positive regulation of pinocytosis // inferred from mutant phenotype /// 0048666 // neuron development // traceable author statement /// 0050803 // regulation of synapse structure and activity // non-traceable author statement /// 0050896 // response to stimulus // inferred from electronic annotation /// 0051181 // cofactor transport // inferred from mutant phenotype /// 0051186 // cofactor metabolic process // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030424 // axon // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008474 // palmitoyl-(protein) hydrolase activity // inferred from direct assay /// 0008474 // palmitoyl-(protein) hydrolase activity // inferred from mutant phenotype /// 0008474 // palmitoyl-(protein) hydrolase activity // inferred from sequence or structural similarity /// 0016290 // palmitoyl-CoA hydrolase activity // inferred from direct assay /// 0016290 // palmitoyl-CoA hydrolase activity // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 8.12 </td> <td> 433.11 </td> <td> 0.48 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201811_x_at </td> <td> 201811_x_at </td> <td> NM_004844 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004844.1 /DEF=Homo sapiens SH3-domain binding protein 5 (BTK-associated) (SH3BP5), mRNA.  /FEA=mRNA /GEN=SH3BP5 /PROD=SH3-domain binding protein 5 (BTK-associated) /DB_XREF=gi:4759057 /UG=Hs.109150 SH3-domain binding protein 5 (BTK-associated) /FL=gb:AB005047.1 gb:NM_004844.1 </td> <td> NM_004844 </td> <td> SH3-domain binding protein 5 (BTK-associated) </td> <td> SH3BP5 </td> <td> 9467 </td> <td> NM_001018009 /// NM_004844 /// XM_006713420 </td> <td> 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0035556 // intracellular signal transduction // inferred from direct assay </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation </td> <td> 0004860 // protein kinase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation </td> <td> -20.13 </td> <td> 514.29 </td> <td> -0.48 </td> <td> 0.64 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202686_s_at </td> <td> 202686_s_at </td> <td> NM_021913 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021913.1 /DEF=Homo sapiens AXL receptor tyrosine kinase (AXL), transcript variant 1, mRNA.  /FEA=mRNA /GEN=AXL /PROD=AXL receptor tyrosine kinase isoform 1precursor /DB_XREF=gi:11863122 /UG=Hs.83341 AXL receptor tyrosine kinase /FL=gb:NM_021913.1 </td> <td> NM_021913 </td> <td> AXL receptor tyrosine kinase </td> <td> AXL </td> <td> 558 </td> <td> NM_001278599 /// NM_001699 /// NM_021913 </td> <td> 0001764 // neuron migration // inferred from electronic annotation /// 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0001961 // positive regulation of cytokine-mediated signaling pathway // inferred from direct assay /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006909 // phagocytosis // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007167 // enzyme linked receptor protein signaling pathway // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0021885 // forebrain cell migration // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0032689 // negative regulation of interferon-gamma production // inferred from direct assay /// 0032720 // negative regulation of tumor necrosis factor production // inferred from electronic annotation /// 0032825 // positive regulation of natural killer cell differentiation // inferred from direct assay /// 0032940 // secretion by cell // inferred from electronic annotation /// 0034101 // erythrocyte homeostasis // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from electronic annotation /// 0035457 // cellular response to interferon-alpha // inferred from direct assay /// 0042698 // ovulation cycle // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from electronic annotation /// 0043491 // protein kinase B signaling // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0048469 // cell maturation // inferred from expression pattern /// 0051250 // negative regulation of lymphocyte activation // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from electronic annotation /// 0060068 // vagina development // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0097028 // dendritic cell differentiation // inferred from expression pattern /// 2000669 // negative regulation of dendritic cell apoptotic process // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0001786 // phosphatidylserine binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0032036 // myosin heavy chain binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 38.80 </td> <td> 464.45 </td> <td> 0.48 </td> <td> 0.65 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209131_s_at </td> <td> 209131_s_at </td> <td> U55936 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U55936.1 /DEF=Human SNAP-23 mRNA, complete cds. /FEA=mRNA /PROD=SNAP-23 /DB_XREF=gi:1374812 /UG=Hs.184376 synaptosomal-associated protein, 23kD /FL=gb:BC000148.2 gb:BC003686.1 gb:U55936.1 gb:Y09567.1 </td> <td> U55936 </td> <td> synaptosomal-associated protein, 23kDa </td> <td> SNAP23 </td> <td> 8773 </td> <td> NM_003825 /// NM_130798 /// XM_006720725 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006903 // vesicle targeting // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0061025 // membrane fusion // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042581 // specific granule // inferred from direct assay /// 0042582 // azurophil granule // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -10.20 </td> <td> 128.25 </td> <td> -0.48 </td> <td> 0.65 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 216081_at </td> <td> 216081_at </td> <td> AK027151 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK027151.1 /DEF=Homo sapiens cDNA: FLJ23498 fis, clone LNG02683. /FEA=mRNA /DB_XREF=gi:10440206 /UG=Hs.306904 Homo sapiens cDNA: FLJ23498 fis, clone LNG02683 </td> <td> AK027151 </td> <td> laminin, alpha 4 </td> <td> LAMA4 </td> <td> 3910 </td> <td> NM_001105206 /// NM_001105207 /// NM_001105208 /// NM_001105209 /// NM_002290 /// XM_005266983 /// XM_005266984 /// XM_006715480 /// XM_006715481 </td> <td> 0001568 // blood vessel development // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0045995 // regulation of embryonic development // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005605 // basal lamina // traceable author statement /// 0005606 // laminin-1 complex // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005102 // receptor binding // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement </td> <td> 9.00 </td> <td> 97.75 </td> <td> 0.48 </td> <td> 0.65 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 204757_s_at </td> <td> 204757_s_at </td> <td> R61539 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:R61539 /FEA=EST /DB_XREF=gi:832234 /DB_XREF=est:yh16f01.s1 /CLONE=IMAGE:37799 /UG=Hs.26899 KIAA0285 gene product /FL=gb:AB006623.1 gb:NM_014807.1 </td> <td> R61539 </td> <td> C2CD2-like </td> <td> C2CD2L </td> <td> 9854 </td> <td> NM_001290474 /// NM_014807 /// XM_005271738 /// XM_005271739 /// XM_005271740 /// XM_005271741 /// XM_005271742 /// XM_006718948 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> -7.67 </td> <td> 41.04 </td> <td> -0.48 </td> <td> 0.65 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208860_s_at </td> <td> 208860_s_at </td> <td> U09820 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U09820.1 /DEF=Human helicase II (RAD54L) mRNA, complete cds. /FEA=mRNA /GEN=RAD54L /PROD=helicase II /DB_XREF=gi:606832 /UG=Hs.96264 alpha thalassemiamental retardation syndrome X-linked (RAD54 (S. cerevisiae) homolog) /FL=gb:U09820.1 gb:NM_000489.1 gb:U72937.2 </td> <td> U09820 </td> <td> alpha thalassemia/mental retardation syndrome X-linked </td> <td> ATRX </td> <td> 546 </td> <td> NM_000489 /// NM_138270 /// NM_138271 /// XM_005262153 /// XM_005262154 /// XM_005262155 /// XM_005262156 /// XM_005262157 /// XM_006724666 /// XM_006724667 /// XM_006724668 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006306 // DNA methylation // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006334 // nucleosome assembly // inferred from direct assay /// 0006336 // DNA replication-independent nucleosome assembly // inferred from mutant phenotype /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010571 // positive regulation of nuclear cell cycle DNA replication // inferred from sequence or structural similarity /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0031297 // replication fork processing // inferred from sequence or structural similarity /// 0032206 // positive regulation of telomere maintenance // inferred from sequence or structural similarity /// 0032508 // DNA duplex unwinding // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0072711 // cellular response to hydroxyurea // inferred from sequence or structural similarity /// 1901581 // negative regulation of telomeric RNA transcription from RNA pol II promoter // inferred from sequence or structural similarity </td> <td> 0000228 // nuclear chromosome // inferred from electronic annotation /// 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0031933 // telomeric heterochromatin // inferred from sequence or structural similarity /// 0070603 // SWI/SNF superfamily-type complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015616 // DNA translocase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0035064 // methylated histone binding // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction </td> <td> -7.60 </td> <td> 133.43 </td> <td> -0.48 </td> <td> 0.65 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 220796_x_at </td> <td> 220796_x_at </td> <td> NM_024881 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024881.1 /DEF=Homo sapiens hypothetical protein FLJ14251 (FLJ14251), mRNA. /FEA=mRNA /GEN=FLJ14251 /PROD=hypothetical protein FLJ14251 /DB_XREF=gi:13376323 /UG=Hs.214178 hypothetical protein FLJ14251 /FL=gb:NM_024881.1 </td> <td> NM_024881 </td> <td> solute carrier family 35, member E1 </td> <td> SLC35E1 </td> <td> 79939 </td> <td> NM_024881 </td> <td> 0006810 // transport // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 20.95 </td> <td> 205.90 </td> <td> 0.48 </td> <td> 0.65 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 220980_s_at </td> <td> 220980_s_at </td> <td> NM_031284 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031284.1 /DEF=Homo sapiens hypothetical protein DKFZp434B195 (DKFZP434B195), mRNA.  /FEA=mRNA /GEN=DKFZP434B195 /PROD=hypothetical protein DKFZp434B195 /DB_XREF=gi:13775193 /FL=gb:NM_031284.1 </td> <td> NM_031284 </td> <td> ADP-dependent glucokinase </td> <td> ADPGK </td> <td> 83440 </td> <td> NM_031284 /// NR_023318 /// NR_023319 /// XM_006720712 /// XM_006720713 /// XM_006720714 /// XM_006720715 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006096 // glycolytic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0043843 // ADP-specific glucokinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 8.82 </td> <td> 234.41 </td> <td> 0.48 </td> <td> 0.65 </td> <td> 0.71 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208887_at </td> <td> 208887_at </td> <td> BC000733 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000733.1 /DEF=Homo sapiens, eukaryotic translation initiation factor 3, subunit 4 (delta, 44kD), clone MGC:2053, mRNA, complete cds.  /FEA=mRNA /PROD=eukaryotic translation initiation factor 3,subunit 4 (delta, 44kD) /DB_XREF=gi:12653882 /UG=Hs.28081 eukaryotic translation initiation factor 3, subunit 4 (delta, 44kD) /FL=gb:AF094850.1 gb:BC000733.1 gb:AF020833.1 gb:U96074.1 gb:NM_003755.1 </td> <td> BC000733 </td> <td> eukaryotic translation initiation factor 3, subunit G </td> <td> EIF3G </td> <td> 8666 </td> <td> NM_003755 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -21.70 </td> <td> 299.10 </td> <td> -0.47 </td> <td> 0.65 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 210707_x_at </td> <td> 210707_x_at </td> <td> U38980 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U38980.1 /DEF=Human PMS2 related (hPMSR6) mRNA, complete cds. /FEA=mRNA /GEN=hPMSR6 /PROD=hPMSR6 /DB_XREF=gi:1061425 /UG=Hs.306174 postmeiotic segregation increased 2-like 11 /FL=gb:U38980.1 </td> <td> U38980 </td> <td> DTX2P1-UPK3BP1-PMS2P11 readthrough transcribed pseudogene </td> <td> DTX2P1-UPK3BP1-PMS2P11 </td> <td> 441263 </td> <td> NR_023383 </td> <td> 0006298 // mismatch repair // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0032300 // mismatch repair complex // inferred from electronic annotation </td> <td> 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 7.05 </td> <td> 113.65 </td> <td> 0.47 </td> <td> 0.65 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201030_x_at </td> <td> 201030_x_at </td> <td> NM_002300 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002300.1 /DEF=Homo sapiens lactate dehydrogenase B (LDHB), mRNA. /FEA=mRNA /GEN=LDHB /PROD=lactate dehydrogenase B /DB_XREF=gi:4557031 /UG=Hs.234489 lactate dehydrogenase B /FL=gb:BC002362.1 gb:NM_002300.1 </td> <td> NM_002300 </td> <td> lactate dehydrogenase B </td> <td> LDHB </td> <td> 3945 </td> <td> NM_001174097 /// NM_002300 /// XM_006719074 </td> <td> 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006089 // lactate metabolic process // inferred from electronic annotation /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006096 // glycolytic process // inferred from electronic annotation /// 0019674 // NAD metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044262 // cellular carbohydrate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004457 // lactate dehydrogenase activity // inferred from electronic annotation /// 0004459 // L-lactate dehydrogenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> -63.55 </td> <td> 1992.53 </td> <td> -0.47 </td> <td> 0.65 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202152_x_at </td> <td> 202152_x_at </td> <td> NM_003367 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003367.1 /DEF=Homo sapiens upstream transcription factor 2, c-fos interacting (USF2), mRNA.  /FEA=mRNA /GEN=USF2 /PROD=upstream transcription factor 2, c-fosinteracting /DB_XREF=gi:4507846 /UG=Hs.93649 upstream transcription factor 2, c-fos interacting /FL=gb:NM_003367.1 </td> <td> NM_003367 </td> <td> upstream transcription factor 2, c-fos interacting </td> <td> USF2 </td> <td> 7392 </td> <td> NM_003367 /// NM_207291 /// XM_005259197 </td> <td> 0000430 // regulation of transcription from RNA polymerase II promoter by glucose // inferred by curator /// 0000432 // positive regulation of transcription from RNA polymerase II promoter by glucose // inferred from mutant phenotype /// 0000432 // positive regulation of transcription from RNA polymerase II promoter by glucose // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0007595 // lactation // inferred from electronic annotation /// 0019086 // late viral transcription // inferred by curator /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0055088 // lipid homeostasis // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> -13.73 </td> <td> 105.96 </td> <td> -0.47 </td> <td> 0.65 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 212095_s_at </td> <td> 212095_s_at </td> <td> BE552421 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE552421 /FEA=EST /DB_XREF=gi:9794113 /DB_XREF=est:hw26b02.x1 /CLONE=IMAGE:3184011 /UG=Hs.7946 KIAA1288 protein </td> <td> BE552421 </td> <td> microtubule associated tumor suppressor 1 </td> <td> MTUS1 </td> <td> 57509 </td> <td> NM_001001924 /// NM_001001925 /// NM_001001927 /// NM_001001931 /// NM_001166393 /// NM_020749 /// XM_005273577 /// XM_005273578 /// XM_005273579 /// XM_005273580 /// XM_005273581 /// XM_005273582 /// XM_005273583 /// XR_247126 </td> <td> 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td>  </td> <td> -24.57 </td> <td> 356.44 </td> <td> -0.47 </td> <td> 0.65 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200911_s_at </td> <td> 200911_s_at </td> <td> NM_006283 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006283.1 /DEF=Homo sapiens transforming, acidic coiled-coil containing protein 1 (TACC1), mRNA.  /FEA=mRNA /GEN=TACC1 /PROD=transforming, acidic coiled-coil containingprotein 1 /DB_XREF=gi:5454099 /UG=Hs.173159 transforming, acidic coiled-coil containing protein 1 /FL=gb:AF049910.1 gb:NM_006283.1 </td> <td> NM_006283 </td> <td> transforming, acidic coiled-coil containing protein 1 </td> <td> TACC1 </td> <td> 6867 </td> <td> NM_001122824 /// NM_001146216 /// NM_006283 /// XM_005273622 /// XM_005273624 /// XM_005273625 /// XM_005273626 /// XM_005273627 /// XM_005273628 /// XM_005273629 /// XM_005273630 /// XM_005273631 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0022027 // interkinetic nuclear migration // inferred from electronic annotation /// 0032886 // regulation of microtubule-based process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 28.58 </td> <td> 1012.91 </td> <td> 0.47 </td> <td> 0.65 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201467_s_at </td> <td> 201467_s_at </td> <td> AI039874 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI039874 /FEA=EST /DB_XREF=gi:3279068 /DB_XREF=est:ox97c05.x1 /CLONE=IMAGE:1664264 /UG=Hs.80706 diaphorase (NADHNADPH) (cytochrome b-5 reductase) /FL=gb:J03934.1 gb:NM_000903.1 </td> <td> AI039874 </td> <td> NAD(P)H dehydrogenase, quinone 1 </td> <td> NQO1 </td> <td> 1728 </td> <td> NM_000903 /// NM_001025433 /// NM_001025434 /// NM_001286137 </td> <td> 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006801 // superoxide metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006809 // nitric oxide biosynthetic process // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007271 // synaptic transmission, cholinergic // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0009636 // response to toxic substance // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019430 // removal of superoxide radicals // inferred from electronic annotation /// 0032355 // response to estradiol // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003955 // NAD(P)H dehydrogenase (quinone) activity // inferred from electronic annotation /// 0004128 // cytochrome-b5 reductase activity, acting on NAD(P)H // traceable author statement /// 0004784 // superoxide dismutase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -17.92 </td> <td> 162.01 </td> <td> -0.47 </td> <td> 0.65 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200608_s_at </td> <td> 200608_s_at </td> <td> NM_006265 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006265.1 /DEF=Homo sapiens RAD21 (S. pombe) homolog (RAD21), mRNA. /FEA=mRNA /GEN=RAD21 /PROD=RAD21 (S. pombe) homolog /DB_XREF=gi:5453993 /UG=Hs.81848 RAD21 (S. pombe) homolog /FL=gb:D38551.1 gb:NM_006265.1 </td> <td> NM_006265 </td> <td> RAD21 homolog (S. pombe) </td> <td> RAD21 </td> <td> 5885 </td> <td> NM_006265 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0071168 // protein localization to chromatin // inferred from mutant phenotype </td> <td> 0000228 // nuclear chromosome // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008278 // cohesin complex // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0034991 // nuclear meiotic cohesin complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -17.67 </td> <td> 310.56 </td> <td> -0.47 </td> <td> 0.65 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201268_at </td> <td> 201268_at </td> <td> NM_002512 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002512.1 /DEF=Homo sapiens non-metastatic cells 2, protein (NM23B) expressed in (NME2), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=NME2 /PROD=non-metastatic cells 2, protein (NM23B)expressed in /DB_XREF=gi:4505408 /UG=Hs.275163 non-metastatic cells 2, protein (NM23B) expressed in /FL=gb:BC002476.1 gb:M36981.1 gb:L16785.1 gb:NM_002512.1 </td> <td> NM_002512 </td> <td> NME1-NME2 readthrough /// NME/NM23 nucleoside diphosphate kinase 2 </td> <td> NME1-NME2 /// NME2 </td> <td> 4831 /// 654364 </td> <td> NM_001018136 /// NM_001018137 /// NM_001018138 /// NM_001018139 /// NM_001198682 /// NM_002512 /// NR_037149 </td> <td> 0002762 // negative regulation of myeloid leukocyte differentiation // inferred from electronic annotation /// 0006165 // nucleoside diphosphate phosphorylation // inferred from electronic annotation /// 0006183 // GTP biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from electronic annotation /// 0006308 // DNA catabolic process // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from direct assay /// 0007399 // nervous system development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0009142 // nucleoside triphosphate biosynthetic process // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014075 // response to amine // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0033574 // response to testosterone // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045618 // positive regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0045682 // regulation of epidermis development // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071398 // cellular response to fatty acid // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071944 // cell periphery // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004536 // deoxyribonuclease activity // inferred from direct assay /// 0004550 // nucleoside diphosphate kinase activity // inferred from direct assay /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019215 // intermediate filament binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from electronic annotation /// 0043024 // ribosomal small subunit binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -42.22 </td> <td> 826.79 </td> <td> -0.47 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202028_s_at </td> <td> 202028_s_at </td> <td> BC000603 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BC000603.1 /DEF=Homo sapiens, ribosomal protein L38, clone MGC:1637, mRNA, complete cds.  /FEA=mRNA /PROD=ribosomal protein L38 /DB_XREF=gi:12653644 /UG=Hs.2017 ribosomal protein L38 /FL=gb:BC000603.1 gb:NM_000999.1 </td> <td> BC000603 </td> <td> ribosomal protein L38 </td> <td> RPL38 </td> <td> 6169 </td> <td> NM_000999 /// NM_001035258 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0034463 // 90S preribosome assembly // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048318 // axial mesoderm development // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0033291 // eukaryotic 80S initiation complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement </td> <td> 47.90 </td> <td> 470.20 </td> <td> 0.47 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 209831_x_at </td> <td> 209831_x_at </td> <td> AB004574 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB004574.1 /DEF=Homo sapiens mRNA for deoxyribonuclease II, complete cds. /FEA=mRNA /GEN=DNASE2 /PROD=deoxyribonuclease II /DB_XREF=gi:3184394 /UG=Hs.118243 deoxyribonuclease II, lysosomal /FL=gb:AF045937.1 gb:AF047016.1 gb:AB004574.1 gb:AF060222.1 gb:NM_001375.1 </td> <td> AB004574 </td> <td> deoxyribonuclease II, lysosomal </td> <td> DNASE2 </td> <td> 1777 </td> <td> NM_001375 </td> <td> 0000737 // DNA catabolic process, endonucleolytic // inferred from electronic annotation /// 0006259 // DNA metabolic process // traceable author statement /// 0006308 // DNA catabolic process // inferred from electronic annotation /// 0006309 // apoptotic DNA fragmentation // not recorded /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0005622 // intracellular // not recorded /// 0005764 // lysosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004520 // endodeoxyribonuclease activity // inferred from electronic annotation /// 0004531 // deoxyribonuclease II activity // not recorded /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -11.35 </td> <td> 180.97 </td> <td> -0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 215177_s_at </td> <td> 215177_s_at </td> <td> AV733308 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV733308 /FEA=EST /DB_XREF=gi:10850853 /DB_XREF=est:AV733308 /CLONE=cdAADA11 /UG=Hs.227730 integrin, alpha 6 </td> <td> AV733308 </td> <td> integrin, alpha 6 </td> <td> ITGA6 </td> <td> 3655 </td> <td> NM_000210 /// NM_001079818 /// XM_006712510 /// XM_006712511 </td> <td> 0007044 // cell-substrate junction assembly // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0031581 // hemidesmosome assembly // traceable author statement /// 0031589 // cell-substrate adhesion // inferred from mutant phenotype /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0033627 // cell adhesion mediated by integrin // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0042327 // positive regulation of phosphorylation // inferred from mutant phenotype /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from genetic interaction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005604 // basement membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0008305 // integrin complex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0034676 // integrin alpha6-beta4 complex // inferred from electronic annotation /// 0045178 // basal part of cell // inferred from electronic annotation </td> <td> 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -11.88 </td> <td> 251.29 </td> <td> -0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202461_at </td> <td> 202461_at </td> <td> NM_014239 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014239.1 /DEF=Homo sapiens eukaryotic translation initiation factor 2B, subunit 2 (beta, 39kD) (EIF2B2), mRNA.  /FEA=mRNA /GEN=EIF2B2 /PROD=eukaryotic translation initiation factor 2B,subunit 2 (beta, 39kD) /DB_XREF=gi:7657057 /UG=Hs.170001 eukaryotic translation initiation factor 2B, subunit 2 (beta, 39kD) /FL=gb:BC000494.1 gb:BC003165.1 gb:AF035280.1 gb:NM_014239.1 </td> <td> NM_014239 </td> <td> eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa </td> <td> EIF2B2 </td> <td> 8892 </td> <td> NM_014239 </td> <td> 0001541 // ovarian follicle development // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // not recorded /// 0006446 // regulation of translational initiation // traceable author statement /// 0007417 // central nervous system development // inferred from mutant phenotype /// 0009408 // response to heat // inferred from sequence or structural similarity /// 0009408 // response to heat // traceable author statement /// 0009749 // response to glucose // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0014003 // oligodendrocyte development // inferred from mutant phenotype /// 0019509 // L-methionine salvage from methylthioadenosine // not recorded /// 0042552 // myelination // inferred from mutant phenotype /// 0043087 // regulation of GTPase activity // inferred from direct assay /// 0043087 // regulation of GTPase activity // inferred from mutant phenotype /// 0043434 // response to peptide hormone // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051716 // cellular response to stimulus // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005851 // eukaryotic translation initiation factor 2B complex // inferred from direct assay </td> <td> 0003743 // translation initiation factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // not recorded </td> <td> 12.85 </td> <td> 448.32 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 213655_at </td> <td> 213655_at </td> <td> AA502643 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA502643 /FEA=EST /DB_XREF=gi:2237610 /DB_XREF=est:ne42g05.s1 /CLONE=IMAGE:900056 /UG=Hs.79474 tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, epsilon polypeptide </td> <td> AA502643 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -117.78 </td> <td> 1076.04 </td> <td> -0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 202053_s_at </td> <td> 202053_s_at </td> <td> L47162 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L47162.1 /DEF=Human fatty aldehyde dehydrogenase (FALDH) mRNA, complete cds. /FEA=mRNA /GEN=FALDH /PROD=fatty aldehyde dehydrogenase /DB_XREF=gi:1082035 /UG=Hs.159608 aldehyde dehydrogenase 3 family, member A2 /FL=gb:L47162.1 gb:U46689.1 gb:NM_000382.1 </td> <td> L47162 </td> <td> aldehyde dehydrogenase 3 family, member A2 </td> <td> ALDH3A2 </td> <td> 224 </td> <td> NM_000382 /// NM_001031806 </td> <td> 0006081 // cellular aldehyde metabolic process // inferred from direct assay /// 0006081 // cellular aldehyde metabolic process // non-traceable author statement /// 0006714 // sesquiterpenoid metabolic process // inferred from direct assay /// 0007417 // central nervous system development // inferred from mutant phenotype /// 0007422 // peripheral nervous system development // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008218 // bioluminescence // inferred from electronic annotation /// 0008544 // epidermis development // inferred from mutant phenotype /// 0033306 // phytol metabolic process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from direct assay /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from mutant phenotype /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0046577 // long-chain-alcohol oxidase activity // inferred from direct assay /// 0050061 // long-chain-aldehyde dehydrogenase activity // inferred from direct assay /// 0052814 // medium-chain-aldehyde dehydrogenase activity // inferred from direct assay </td> <td> 8.58 </td> <td> 124.74 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 208117_s_at </td> <td> 208117_s_at </td> <td> NM_031206 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031206.1 /DEF=Homo sapiens hypothetical protein FLJ12525 (FLJ12525), mRNA. /FEA=mRNA /GEN=FLJ12525 /PROD=hypothetical protein FLJ12525 /DB_XREF=gi:13654269 /FL=gb:NM_031206.1 </td> <td> NM_031206 </td> <td> LAS1-like (S. cerevisiae) </td> <td> LAS1L </td> <td> 81887 </td> <td> NM_001170649 /// NM_001170650 /// NM_031206 /// XM_005262301 /// XM_005262303 /// XM_005262304 /// XM_005262305 /// XM_005262306 /// XM_005262307 /// XR_244504 /// XR_430522 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 10.15 </td> <td> 42.65 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201223_s_at </td> <td> 201223_s_at </td> <td> NM_002874 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002874.1 /DEF=Homo sapiens RAD23 (S. cerevisiae) homolog B (RAD23B), mRNA. /FEA=mRNA /GEN=RAD23B /PROD=RAD23 (S. cerevisiae) homolog B /DB_XREF=gi:4506386 /UG=Hs.178658 RAD23 (S. cerevisiae) homolog B /FL=gb:NM_002874.1 gb:D21090.1 </td> <td> NM_002874 </td> <td> RAD23 homolog B (S. cerevisiae) </td> <td> RAD23B </td> <td> 5887 </td> <td> NM_001244713 /// NM_001244724 /// NM_002874 </td> <td> 0000715 // nucleotide-excision repair, DNA damage recognition // inferred from direct assay /// 0000715 // nucleotide-excision repair, DNA damage recognition // traceable author statement /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasome-mediated ubiquitin-dependent protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0071942 // XPC complex // inferred from direct assay </td> <td> 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay </td> <td> 28.05 </td> <td> 230.28 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201368_at </td> <td> 201368_at </td> <td> U07802 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U07802 /DEF=Human Tis11d gene, complete cds /FEA=mRNA /DB_XREF=gi:984508 /UG=Hs.78909 butyrate response factor 2 (EGF-response factor 2) /FL=gb:BC005010.1 gb:NM_006887.1 </td> <td> U07802 </td> <td> ZFP36 ring finger protein-like 2 </td> <td> ZFP36L2 </td> <td> 678 </td> <td> NM_006887 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006402 // mRNA catabolic process // inferred from sequence or structural similarity /// 0008283 // cell proliferation // traceable author statement /// 0030097 // hemopoiesis // inferred from sequence or structural similarity /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from sequence or structural similarity /// 0043488 // regulation of mRNA stability // inferred from electronic annotation /// 0048103 // somatic stem cell division // inferred from sequence or structural similarity /// 0060216 // definitive hemopoiesis // inferred from sequence or structural similarity /// 1900153 // positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // inferred from sequence or structural similarity /// 2000737 // negative regulation of stem cell differentiation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0017091 // AU-rich element binding // inferred from direct assay /// 0035925 // mRNA 3'-UTR AU-rich region binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 11.93 </td> <td> 301.79 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 201060_x_at </td> <td> 201060_x_at </td> <td> AI537887 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI537887 /FEA=EST /DB_XREF=gi:4452022 /DB_XREF=est:tp32g06.x1 /CLONE=IMAGE:2189530 /UG=Hs.160483 erythrocyte membrane protein band 7.2 (stomatin) /FL=gb:M81635.1 gb:NM_004099.1 </td> <td> AI537887 </td> <td> stomatin </td> <td> STOM </td> <td> 2040 </td> <td> NM_001270526 /// NM_001270527 /// NM_004099 /// NM_198194 /// NR_073037 </td> <td> 0051260 // protein homooligomerization // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> 20.38 </td> <td> 363.54 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.61 </td> </tr>
  <tr> <td> 200600_at </td> <td> 200600_at </td> <td> NM_002444 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002444.1 /DEF=Homo sapiens moesin (MSN), mRNA. /FEA=mRNA /GEN=MSN /PROD=moesin /DB_XREF=gi:4505256 /UG=Hs.170328 moesin /FL=gb:M69066.1 gb:NM_002444.1 </td> <td> NM_002444 </td> <td> moesin </td> <td> MSN </td> <td> 4478 </td> <td> NM_002444 /// XM_005262269 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from expression pattern /// 0010628 // positive regulation of gene expression // inferred from genetic interaction /// 0022614 // membrane to membrane docking // inferred from expression pattern /// 0050900 // leukocyte migration // inferred from expression pattern /// 0061028 // establishment of endothelial barrier // inferred from genetic interaction /// 2000401 // regulation of lymphocyte migration // inferred from mutant phenotype </td> <td> 0001931 // uropod // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005902 // microvillus // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction </td> <td> -47.20 </td> <td> 1612.65 </td> <td> -0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202857_at </td> <td> 202857_at </td> <td> NM_014255 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014255.1 /DEF=Homo sapiens transmembrane protein 4 (TMEM4), mRNA. /FEA=mRNA /GEN=TMEM4 /PROD=transmembrane protein 4 /DB_XREF=gi:7657175 /UG=Hs.8752 transmembrane protein 4 /FL=gb:AB015631.1 gb:NM_014255.1 </td> <td> NM_014255 </td> <td> canopy FGF signaling regulator 2 </td> <td> CNPY2 </td> <td> 10330 </td> <td> NM_001190991 /// NM_014255 </td> <td> 0010629 // negative regulation of gene expression // inferred from sequence or structural similarity /// 0010988 // regulation of low-density lipoprotein particle clearance // inferred from sequence or structural similarity /// 0045716 // positive regulation of low-density lipoprotein particle receptor biosynthetic process // inferred from sequence or structural similarity </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 9.50 </td> <td> 315.82 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209408_at </td> <td> 209408_at </td> <td> U63743 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U63743.1 /DEF=Homo sapiens mitotic centromere-associated kinesin mRNA, complete cds.  /FEA=mRNA /PROD=mitotic centromere-associated kinesin /DB_XREF=gi:1695881 /UG=Hs.69360 kinesin-like 6 (mitotic centromere-associated kinesin) /FL=gb:NM_006845.2 gb:U63743.1 </td> <td> U63743 </td> <td> kinesin family member 2C </td> <td> KIF2C </td> <td> 11004 </td> <td> NM_006845 /// XM_005270394 /// XM_005270395 /// XM_005270396 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007018 // microtubule-based movement // traceable author statement /// 0007019 // microtubule depolymerization // inferred from direct assay /// 0007019 // microtubule depolymerization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0030951 // establishment or maintenance of microtubule cytoskeleton polarity // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051983 // regulation of chromosome segregation // inferred from mutant phenotype </td> <td> 0000775 // chromosome, centromeric region // inferred from direct assay /// 0000776 // kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from sequence or structural similarity /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0035371 // microtubule plus-end // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation /// 0019237 // centromeric DNA binding // traceable author statement /// 0051010 // microtubule plus-end binding // inferred from direct assay </td> <td> 8.13 </td> <td> 185.01 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201025_at </td> <td> 201025_at </td> <td> AB018284 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB018284.1 /DEF=Homo sapiens mRNA for KIAA0741 protein, complete cds. /FEA=mRNA /GEN=KIAA0741 /PROD=KIAA0741 protein /DB_XREF=gi:3882202 /UG=Hs.158688 KIAA0741 gene product /FL=gb:AB018284.1 gb:AF078035.1 gb:NM_015904.1 </td> <td> AB018284 </td> <td> eukaryotic translation initiation factor 5B </td> <td> EIF5B </td> <td> 9669 </td> <td> NM_015904 /// XM_005264075 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0006446 // regulation of translational initiation // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // non-traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 10.32 </td> <td> 122.61 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201236_s_at </td> <td> 201236_s_at </td> <td> NM_006763 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006763.1 /DEF=Homo sapiens BTG family, member 2 (BTG2), mRNA. /FEA=mRNA /GEN=BTG2 /PROD=BTG family, member 2 /DB_XREF=gi:5802987 /UG=Hs.75462 BTG family, member 2 /FL=gb:U72649.1 gb:NM_006763.1 </td> <td> NM_006763 </td> <td> BTG family, member 2 </td> <td> BTG2 </td> <td> 7832 </td> <td> NM_006763 </td> <td> 0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006479 // protein methylation // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008306 // associative learning // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0021542 // dentate gyrus development // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043434 // response to peptide hormone // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0060213 // positive regulation of nuclear-transcribed mRNA poly(A) tail shortening // inferred from direct assay /// 2000178 // negative regulation of neural precursor cell proliferation // inferred from electronic annotation </td> <td> 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 8.92 </td> <td> 128.76 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211833_s_at </td> <td> 211833_s_at </td> <td> U19599 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U19599.1 /DEF=Human (BAX delta) mRNA, complete cds. /FEA=CDS /PROD=BAX delta /DB_XREF=gi:841237 /UG=Hs.159428 BCL2-associated X protein /FL=gb:U19599.1 </td> <td> U19599 </td> <td> BCL2-associated X protein </td> <td> BAX </td> <td> 581 </td> <td> NM_001291428 /// NM_001291429 /// NM_001291430 /// NM_001291431 /// NM_004324 /// NM_138761 /// NM_138762 /// NM_138763 /// NM_138764 /// NR_027882 /// XM_006723313 /// XM_006723314 </td> <td> 0001101 // response to acid // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001776 // leukocyte homeostasis // inferred from electronic annotation /// 0001777 // T cell homeostatic proliferation // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001783 // B cell apoptotic process // inferred from direct assay /// 0001822 // kidney development // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from direct assay /// 0001844 // protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002262 // myeloid cell homeostasis // inferred from electronic annotation /// 0002352 // B cell negative selection // inferred from electronic annotation /// 0002358 // B cell homeostatic proliferation // inferred from electronic annotation /// 0002904 // positive regulation of B cell apoptotic process // inferred from electronic annotation /// 0006309 // apoptotic DNA fragmentation // inferred from mutant phenotype /// 0006687 // glycosphingolipid metabolic process // inferred from electronic annotation /// 0006808 // regulation of nitrogen utilization // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0006927 // transformed cell apoptotic process // inferred from mutant phenotype /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008053 // mitochondrial fusion // inferred from direct assay /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008625 // extrinsic apoptotic signaling pathway via death domain receptors // inferred by curator /// 0008630 // intrinsic apoptotic signaling pathway in response to DNA damage // not recorded /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // inferred from direct assay /// 0008637 // apoptotic mitochondrial changes // inferred from direct assay /// 0009566 // fertilization // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009636 // response to toxic substance // inferred from direct assay /// 0009651 // response to salt stress // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0010248 // establishment or maintenance of transmembrane electrochemical gradient // inferred from direct assay /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030264 // nuclear fragmentation involved in apoptotic nuclear change // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0032469 // endoplasmic reticulum calcium ion homeostasis // traceable author statement /// 0032471 // negative regulation of endoplasmic reticulum calcium ion concentration // inferred from electronic annotation /// 0032976 // release of matrix enzymes from mitochondria // inferred from direct assay /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0033599 // regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034644 // cellular response to UV // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035234 // ectopic germ cell programmed cell death // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043281 // regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043496 // regulation of protein homodimerization activity // inferred from direct assay /// 0043497 // regulation of protein heterodimerization activity // inferred from physical interaction /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from direct assay /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from direct assay /// 0045136 // development of secondary sexual characteristics // inferred from electronic annotation /// 0046666 // retinal cell programmed cell death // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0048087 // positive regulation of developmental pigmentation // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0048515 // spermatid differentiation // inferred from electronic annotation /// 0048597 // post-embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0048872 // homeostasis of number of cells // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from direct assay /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from direct assay /// 0060011 // Sertoli cell proliferation // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0060058 // positive regulation of apoptotic process involved in mammary gland involution // inferred from electronic annotation /// 0060068 // vagina development // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from mutant phenotype /// 0070242 // thymocyte apoptotic process // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0097190 // apoptotic signaling pathway // inferred from direct assay /// 0097191 // extrinsic apoptotic signaling pathway // inferred from direct assay /// 0097192 // extrinsic apoptotic signaling pathway in absence of ligand // not recorded /// 0097193 // intrinsic apoptotic signaling pathway // inferred from direct assay /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 0097296 // activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway // inferred from electronic annotation /// 1900103 // positive regulation of endoplasmic reticulum unfolded protein response // inferred from mutant phenotype /// 1901030 // positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway // traceable author statement /// 1902108 // regulation of mitochondrial membrane permeability involved in apoptotic process // inferred from electronic annotation /// 1902110 // positive regulation of mitochondrial membrane permeability involved in apoptotic process // inferred from electronic annotation /// 1902262 // apoptotic process involved in patterning of blood vessels // inferred from electronic annotation /// 1902263 // apoptotic process involved in embryonic digit morphogenesis // inferred from electronic annotation /// 1902512 // positive regulation of apoptotic DNA fragmentation // inferred from mutant phenotype /// 1990009 // retinal cell apoptotic process // inferred from mutant phenotype /// 1990117 // B cell receptor apoptotic signaling pathway // inferred from direct assay /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // not recorded /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005757 // mitochondrial permeability transition pore complex // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0046930 // pore complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097136 // Bcl-2 family protein complex // inferred from direct assay /// 0097144 // BAX complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from direct assay /// 0015267 // channel activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0051434 // BH3 domain binding // inferred from direct assay /// 0051434 // BH3 domain binding // inferred from physical interaction </td> <td> 17.35 </td> <td> 121.33 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217972_at </td> <td> 217972_at </td> <td> NM_017812 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017812.1 /DEF=Homo sapiens hypothetical protein FLJ20420 (FLJ20420), mRNA. /FEA=mRNA /GEN=FLJ20420 /PROD=hypothetical protein FLJ20420 /DB_XREF=gi:8923389 /UG=Hs.6693 hypothetical protein FLJ20420 /FL=gb:NM_017812.1 </td> <td> NM_017812 </td> <td> coiled-coil-helix-coiled-coil-helix domain containing 3 </td> <td> CHCHD3 </td> <td> 54927 </td> <td> NM_017812 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007007 // inner mitochondrial membrane organization // inferred from mutant phenotype /// 0008053 // mitochondrial fusion // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001227 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019902 // phosphatase binding // inferred from direct assay /// 0032947 // protein complex scaffold // inferred from sequence or structural similarity </td> <td> 7.53 </td> <td> 239.46 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201215_at </td> <td> 201215_at </td> <td> NM_005032 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005032.2 /DEF=Homo sapiens plastin 3 (T isoform) (PLS3), mRNA. /FEA=mRNA /GEN=PLS3 /PROD=plastin 3 precursor /DB_XREF=gi:7549808 /UG=Hs.4114 plastin 3 (T isoform) /FL=gb:M22299.1 gb:NM_005032.2 </td> <td> NM_005032 </td> <td> plastin 3 </td> <td> PLS3 </td> <td> 5358 </td> <td> NM_001136025 /// NM_001172335 /// NM_001282337 /// NM_001282338 /// NM_005032 </td> <td> 0060348 // bone development // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 29.40 </td> <td> 1775.05 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203413_at </td> <td> 203413_at </td> <td> NM_006159 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006159.1 /DEF=Homo sapiens nel (chicken)-like 2 (NELL2), mRNA. /FEA=mRNA /GEN=NELL2 /PROD=nel (chicken)-like 2 /DB_XREF=gi:5453765 /UG=Hs.79389 nel (chicken)-like 2 /FL=gb:D83018.1 gb:NM_006159.1 </td> <td> NM_006159 </td> <td> NEL-like 2 (chicken) </td> <td> NELL2 </td> <td> 4753 </td> <td> NM_001145107 /// NM_001145108 /// NM_001145109 /// NM_001145110 /// NM_006159 /// XM_005268905 </td> <td> 0007155 // cell adhesion // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation </td> <td> 7.88 </td> <td> 38.04 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.62 </td> </tr>
  <tr> <td> 207365_x_at </td> <td> 207365_x_at </td> <td> NM_014709 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014709.1 /DEF=Homo sapiens KIAA0570 gene product (KIAA0570), mRNA. /FEA=mRNA /GEN=KIAA0570 /PROD=KIAA0570 gene product /DB_XREF=gi:7662185 /UG=Hs.114293 KIAA0570 gene product /FL=gb:AB011142.1 gb:NM_014709.1 </td> <td> NM_014709 </td> <td> ubiquitin specific peptidase 34 </td> <td> USP34 </td> <td> 9736 </td> <td> NM_014709 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0032781 // positive regulation of ATPase activity // inferred from electronic annotation /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from direct assay </td> <td>  </td> <td> 0001671 // ATPase activator activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation </td> <td> -14.87 </td> <td> 150.91 </td> <td> -0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211072_x_at </td> <td> 211072_x_at </td> <td> BC006481 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006481.1 /DEF=Homo sapiens, tubulin alpha 1, clone MGC:4387, mRNA, complete cds. /FEA=mRNA /PROD=tubulin alpha 1 /DB_XREF=gi:13623706 /FL=gb:BC006481.1 </td> <td> BC006481 </td> <td> tubulin, alpha 1b </td> <td> TUBA1B </td> <td> 10376 </td> <td> NM_006082 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // traceable author statement /// 0030705 // cytoskeleton-dependent intracellular transport // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051301 // cell division // traceable author statement /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 188.97 </td> <td> 3931.74 </td> <td> 0.46 </td> <td> 0.66 </td> <td> 0.72 </td> <td> -4.62 </td> </tr>
  <tr> <td> 213603_s_at </td> <td> 213603_s_at </td> <td> BE138888 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE138888 /FEA=EST /DB_XREF=gi:8601388 /DB_XREF=est:xw97c06.x1 /CLONE=IMAGE:2835946 /UG=Hs.301175 HSPC022 protein </td> <td> BE138888 </td> <td> ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) </td> <td> RAC2 </td> <td> 5880 </td> <td> NM_002872 /// XM_006724286 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010310 // regulation of hydrogen peroxide metabolic process // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0030031 // cell projection assembly // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0045453 // bone resorption // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0060263 // regulation of respiratory burst // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 17.88 </td> <td> 510.56 </td> <td> 0.45 </td> <td> 0.66 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 206176_at </td> <td> 206176_at </td> <td> NM_001718 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001718.2 /DEF=Homo sapiens bone morphogenetic protein 6 (BMP6), mRNA. /FEA=mRNA /GEN=BMP6 /PROD=bone morphogenetic protein 6 precursor /DB_XREF=gi:4809281 /UG=Hs.285671 bone morphogenetic protein 6 /FL=gb:M60315.1 gb:NM_001718.2 </td> <td> NM_001718 </td> <td> bone morphogenetic protein 6 </td> <td> BMP6 </td> <td> 654 </td> <td> NM_001718 </td> <td> 0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001654 // eye development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0003323 // type B pancreatic cell development // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0014823 // response to activity // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030539 // male genitalia development // inferred from electronic annotation /// 0032026 // response to magnesium ion // inferred from electronic annotation /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032349 // positive regulation of aldosterone biosynthetic process // inferred from direct assay /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation /// 0045603 // positive regulation of endothelial cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0050714 // positive regulation of protein secretion // non-traceable author statement /// 0051216 // cartilage development // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 2000105 // positive regulation of DNA-dependent DNA replication // non-traceable author statement /// 2000860 // positive regulation of aldosterone secretion // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation </td> <td> 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070700 // BMP receptor binding // inferred from physical interaction </td> <td> 29.15 </td> <td> 630.73 </td> <td> 0.45 </td> <td> 0.66 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209356_x_at </td> <td> 209356_x_at </td> <td> AB030655 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB030655.1 /DEF=Homo sapiens mRNA for mutant p53 binding protein 1 (MBP1), complete cds.  /FEA=mRNA /GEN=MBP1 /PROD=mutant p53 binding protein 1 (MBP1) /DB_XREF=gi:7328920 /UG=Hs.6059 EGF-containing fibulin-like extracellular matrix protein 2 /FL=gb:AF124486.1 gb:AB030655.1 </td> <td> AB030655 </td> <td> EGF containing fibulin-like extracellular matrix protein 2 </td> <td> EFEMP2 </td> <td> 30008 </td> <td> NM_016938 /// NR_037718 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005604 // basement membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 9.38 </td> <td> 148.79 </td> <td> 0.45 </td> <td> 0.66 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 215492_x_at </td> <td> 215492_x_at </td> <td> AL035587 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL035587 /DEF=Human DNA sequence from clone RP3-475N16 on chromosome 6p12.3-21.2. Contains the genes for CTG4A, pre-T cell receptor alpha, a novel protein similar to RPL7A (60S ribosomal protein L7A) and the 3 end of gene KIAA0240. Contains ESTs, STSs, GSSs an... /FEA=mRNA_2 /DB_XREF=gi:6002306 /UG=Hs.169002 Human pre TCR alpha mRNA, partial cds </td> <td> AL035587 </td> <td> pre T-cell antigen receptor alpha </td> <td> PTCRA </td> <td> 171558 </td> <td> NM_001243168 /// NM_001243169 /// NM_001243170 /// NM_138296 </td> <td> 0070244 // negative regulation of thymocyte apoptotic process // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -19.38 </td> <td> 124.81 </td> <td> -0.45 </td> <td> 0.66 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212526_at </td> <td> 212526_at </td> <td> AK002207 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK002207.1 /DEF=Homo sapiens cDNA FLJ11345 fis, clone PLACE1010877, highly similar to Homo sapiens mRNA for KIAA0610 protein.  /FEA=mRNA /DB_XREF=gi:7023938 /UG=Hs.118087 KIAA0610 protein </td> <td> AK002207 </td> <td> spastic paraplegia 20 (Troyer syndrome) </td> <td> SPG20 </td> <td> 23111 </td> <td> NM_001142294 /// NM_001142295 /// NM_001142296 /// NM_015087 /// XM_005266313 /// XM_005266314 /// XM_005266315 /// XM_005266316 /// XM_005266317 </td> <td> 0000910 // cytokinesis // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0009838 // abscission // inferred from mutant phenotype /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0034389 // lipid particle organization // inferred from electronic annotation /// 0048698 // negative regulation of collateral sprouting in absence of injury // inferred from electronic annotation /// 0050905 // neuromuscular process // inferred from electronic annotation /// 0051301 // cell division // inferred from mutant phenotype /// 0051881 // regulation of mitochondrial membrane potential // inferred from mutant phenotype /// 0060612 // adipose tissue development // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005811 // lipid particle // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> -8.50 </td> <td> 179.38 </td> <td> -0.45 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 204354_at </td> <td> 204354_at </td> <td> NM_015450 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015450.1 /DEF=Homo sapiens DKFZP586D211 protein (DKFZP586D211), mRNA. /FEA=mRNA /GEN=DKFZP586D211 /PROD=DKFZP586D211 protein /DB_XREF=gi:13123773 /UG=Hs.31968 DKFZP586D211 protein /FL=gb:BC002923.1 gb:NM_015450.1 </td> <td> NM_015450 </td> <td> protection of telomeres 1 </td> <td> POT1 </td> <td> 25913 </td> <td> NM_001042594 /// NM_015450 /// NR_003102 /// NR_003103 /// NR_003104 /// XM_006715917 </td> <td> 0000723 // telomere maintenance // traceable author statement /// 0007004 // telomere maintenance via telomerase // inferred from direct assay /// 0016233 // telomere capping // inferred from genetic interaction /// 0016233 // telomere capping // inferred from mutant phenotype /// 0032203 // telomere formation via telomerase // inferred from direct assay /// 0032211 // negative regulation of telomere maintenance via telomerase // inferred from mutant phenotype /// 0032212 // positive regulation of telomere maintenance via telomerase // inferred from mutant phenotype /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0051096 // positive regulation of helicase activity // inferred from direct assay /// 0051973 // positive regulation of telomerase activity // inferred from direct assay /// 0051974 // negative regulation of telomerase activity // inferred from direct assay /// 0060383 // positive regulation of DNA strand elongation // inferred from direct assay </td> <td> 0000781 // chromosome, telomeric region // inferred from direct assay /// 0000783 // nuclear telomere cap complex // inferred from direct assay /// 0000784 // nuclear chromosome, telomeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0010521 // telomerase inhibitor activity // inferred from direct assay /// 0017151 // DEAD/H-box RNA helicase binding // inferred from physical interaction /// 0043047 // single-stranded telomeric DNA binding // inferred from direct assay /// 0043047 // single-stranded telomeric DNA binding // inferred from mutant phenotype </td> <td> 6.67 </td> <td> 85.64 </td> <td> 0.45 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200059_s_at </td> <td> 200059_s_at </td> <td> BC001360 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001360.1 /DEF=Homo sapiens, ras homolog gene family, member A, clone MGC:2330, mRNA, complete cds.  /FEA=mRNA /PROD=ras homolog gene family, member A /DB_XREF=gi:12655024 /UG=Hs.77273 ras homolog gene family, member A /FL=gb:NM_001664.1 gb:BC001360.1 gb:L25080.1 </td> <td> BC001360 </td> <td> ras homolog family member A </td> <td> RHOA </td> <td> 387 </td> <td> NM_001664 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008064 // regulation of actin polymerization or depolymerization // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0031098 // stress-activated protein kinase signaling cascade // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from mutant phenotype /// 0033144 // negative regulation of intracellular steroid hormone receptor signaling pathway // inferred from electronic annotation /// 0033688 // regulation of osteoblast proliferation // inferred from sequence or structural similarity /// 0036089 // cleavage furrow formation // inferred from direct assay /// 0042346 // positive regulation of NF-kappaB import into nucleus // non-traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0043149 // stress fiber assembly // inferred from electronic annotation /// 0043200 // response to amino acid // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043297 // apical junction assembly // inferred from mutant phenotype /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043931 // ossification involved in bone maturation // inferred from sequence or structural similarity /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0050773 // regulation of dendrite development // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay /// 0051924 // regulation of calcium ion transport // inferred from electronic annotation /// 0061383 // trabecula morphogenesis // inferred from sequence or structural similarity /// 0071803 // positive regulation of podosome assembly // inferred from electronic annotation /// 0090307 // spindle assembly involved in mitosis // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030054 // cell junction // traceable author statement /// 0030424 // axon // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> -45.02 </td> <td> 2021.89 </td> <td> -0.45 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 204207_s_at </td> <td> 204207_s_at </td> <td> AB012142 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB012142.1 /DEF=Homo sapiens hCAP1a mRNA for mRNA capping enzyme, complete cds. /FEA=mRNA /GEN=hCAP1a /PROD=mRNA capping enzyme /DB_XREF=gi:2979495 /UG=Hs.27345 RNA guanylyltransferase and 5-phosphatase /FL=gb:AF025654.1 gb:AB012142.1 gb:AB009022.1 gb:NM_003800.1 </td> <td> AB012142 </td> <td> RNA guanylyltransferase and 5'-phosphatase </td> <td> RNGTT </td> <td> 8732 </td> <td> NM_001286426 /// NM_001286428 /// NM_003800 /// XM_006715589 /// XR_427976 </td> <td> 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // inferred from direct assay /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006396 // RNA processing // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0098507 // polynucleotide 5' dephosphorylation // inferred from electronic annotation </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004484 // mRNA guanylyltransferase activity // inferred from direct assay /// 0004651 // polynucleotide 5'-phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0008192 // RNA guanylyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0050355 // triphosphatase activity // inferred from direct assay </td> <td> 6.63 </td> <td> 100.24 </td> <td> 0.44 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212042_x_at </td> <td> 212042_x_at </td> <td> BG389744 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG389744 /FEA=EST /DB_XREF=gi:13283180 /DB_XREF=est:602415111F1 /CLONE=IMAGE:4523499 /UG=Hs.153 ribosomal protein L7 </td> <td> BG389744 </td> <td> ribosomal protein L7 </td> <td> RPL7 </td> <td> 6129 </td> <td> NM_000971 /// XM_006716463 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042273 // ribosomal large subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003723 // RNA binding // traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 88.95 </td> <td> 2146.68 </td> <td> 0.44 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217989_at </td> <td> 217989_at </td> <td> NM_016245 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016245.1 /DEF=Homo sapiens retinal short-chain dehydrogenasereductase retSDR2 (LOC51170), mRNA.  /FEA=mRNA /GEN=LOC51170 /PROD=retinal short-chain dehydrogenasereductaseretSDR2 /DB_XREF=gi:7705904 /UG=Hs.12150 retinal short-chain dehydrogenasereductase retSDR2 /FL=gb:AF126780.1 gb:NM_016245.1 </td> <td> NM_016245 </td> <td> hydroxysteroid (17-beta) dehydrogenase 11 </td> <td> HSD17B11 </td> <td> 51170 </td> <td> NM_016245 /// XM_006714232 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006710 // androgen catabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005811 // lipid particle // inferred from direct assay </td> <td> 0004303 // estradiol 17-beta-dehydrogenase activity // inferred from electronic annotation /// 0016229 // steroid dehydrogenase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation </td> <td> -7.28 </td> <td> 78.54 </td> <td> -0.44 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 216366_x_at </td> <td> 216366_x_at </td> <td> AF047245 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF047245.1 /DEF=Homo sapiens clone bsmneg3-t7 immunoglobulin lambda light chain VJ region, (IGL) mRNA, partial cds.  /FEA=mRNA /GEN=IGL /PROD=immunoglobulin lambda light chain /DB_XREF=gi:4566041 /UG=Hs.283876 Homo sapiens clone bsmneg3-t7 immunoglobulin lambda light chain VJ region, (IGL) mRNA, partial cds </td> <td> AF047245 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -9.50 </td> <td> 117.70 </td> <td> -0.44 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 204064_at </td> <td> 204064_at </td> <td> NM_005131 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005131.1 /DEF=Homo sapiens nuclear matrix protein p84 (P84), mRNA. /FEA=mRNA /GEN=P84 /PROD=nuclear matrix protein p84 /DB_XREF=gi:4826881 /UG=Hs.1540 nuclear matrix protein p84 /FL=gb:NM_005131.1 gb:L36529.1 </td> <td> NM_005131 </td> <td> THO complex 1 </td> <td> THOC1 </td> <td> 9984 </td> <td> NM_005131 </td> <td> 0000018 // regulation of DNA recombination // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006406 // mRNA export from nucleus // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0031297 // replication fork processing // inferred from mutant phenotype /// 0032784 // regulation of DNA-templated transcription, elongation // inferred from direct assay /// 0032786 // positive regulation of DNA-templated transcription, elongation // inferred from mutant phenotype /// 0046784 // viral mRNA export from host cell nucleus // inferred from direct assay /// 0048297 // negative regulation of isotype switching to IgA isotypes // inferred from sequence or structural similarity /// 0051028 // mRNA transport // inferred from electronic annotation /// 2000002 // negative regulation of DNA damage checkpoint // inferred from mutant phenotype </td> <td> 0000346 // transcription export complex // inferred from direct assay /// 0000347 // THO complex // inferred from direct assay /// 0000445 // THO complex part of transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0045171 // intercellular bridge // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -11.55 </td> <td> 141.32 </td> <td> -0.44 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 213828_x_at </td> <td> 213828_x_at </td> <td> AA477655 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA477655 /FEA=EST /DB_XREF=gi:2206289 /DB_XREF=est:zu37h09.s1 /CLONE=IMAGE:740225 /UG=Hs.181307 H3 histone, family 3A </td> <td> AA477655 </td> <td> H3 histone, family 3A /// H3 histone, family 3A, pseudogene 4 /// H3 histone, family 3B (H3.3B) </td> <td> H3F3A /// H3F3AP4 /// H3F3B </td> <td> 3020 /// 3021 /// 440926 </td> <td> NM_002107 /// NM_005324 /// NR_002315 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype </td> <td> 0000228 // nuclear chromosome // inferred from direct assay /// 0000786 // nucleosome // inferred from electronic annotation /// 0000788 // nuclear nucleosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -60.43 </td> <td> 2314.76 </td> <td> -0.44 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203198_at </td> <td> 203198_at </td> <td> NM_001261 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001261.1 /DEF=Homo sapiens cyclin-dependent kinase 9 (CDC2-related kinase) (CDK9), mRNA.  /FEA=mRNA /GEN=CDK9 /PROD=cyclin-dependent kinase 9 (CDC2-related kinase) /DB_XREF=gi:4502746 /UG=Hs.150423 cyclin-dependent kinase 9 (CDC2-related kinase) /FL=gb:BC001968.1 gb:NM_001261.1 gb:L25676.1 </td> <td> NM_001261 </td> <td> cyclin-dependent kinase 9 </td> <td> CDK9 </td> <td> 1025 </td> <td> NM_001261 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006282 // regulation of DNA repair // inferred from direct assay /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031056 // regulation of histone modification // inferred from direct assay /// 0043111 // replication fork arrest // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement /// 0071157 // negative regulation of cell cycle arrest // inferred from direct assay /// 0071345 // cellular response to cytokine stimulus // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // traceable author statement /// 0008024 // positive transcription elongation factor complex b // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017069 // snRNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation </td> <td> 9.08 </td> <td> 82.59 </td> <td> 0.44 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211630_s_at </td> <td> 211630_s_at </td> <td> L42531 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:L42531.1 /DEF=Homo sapiens (clone pGSH1) glutathione synthetase (gsh-s) mRNA, complete cds.  /FEA=mRNA /GEN=gsh-s /PROD=glutathione synthetase /DB_XREF=gi:886283 /FL=gb:L42531.1 </td> <td> L42531 </td> <td> glutathione synthetase </td> <td> GSS </td> <td> 2937 </td> <td> NM_000178 /// XM_005260406 </td> <td> 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006750 // glutathione biosynthetic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006979 // response to oxidative stress // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0009410 // response to xenobiotic stimulus // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0034612 // response to tumor necrosis factor // inferred from electronic annotation /// 0043200 // response to amino acid // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 1901687 // glutathione derivative biosynthetic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004363 // glutathione synthase activity // traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0016594 // glycine binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043295 // glutathione binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 6.57 </td> <td> 112.81 </td> <td> 0.44 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211445_x_at </td> <td> 211445_x_at </td> <td> AF315951 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF315951.1 /DEF=Homo sapiens FKSG17 (FKSG17) mRNA, complete cds. /FEA=mRNA /GEN=FKSG17 /PROD=FKSG17 /DB_XREF=gi:12276119 /UG=Hs.307057 Homo sapiens FKSG17 (FKSG17) mRNA, complete cds /FL=gb:AF315951.1 </td> <td> AF315951 </td> <td> nascent-polypeptide-associated complex alpha polypeptide pseudogene 1 </td> <td> NACAP1 </td> <td> 83955 </td> <td> NM_032031 /// NR_002182 </td> <td>  </td> <td>  </td> <td>  </td> <td> 35.53 </td> <td> 501.44 </td> <td> 0.44 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212203_x_at </td> <td> 212203_x_at </td> <td> BF338947 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF338947 /FEA=EST /DB_XREF=gi:11285367 /DB_XREF=est:602036012F1 /CLONE=IMAGE:4184090 /UG=Hs.182241 interferon induced transmembrane protein 3 (1-8U) </td> <td> BF338947 </td> <td> interferon induced transmembrane protein 3 </td> <td> IFITM3 </td> <td> 10410 </td> <td> NM_021034 /// NR_049759 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0009607 // response to biotic stimulus // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0032897 // negative regulation of viral transcription // inferred from direct assay /// 0034341 // response to interferon-gamma // inferred from direct assay /// 0035455 // response to interferon-alpha // inferred from direct assay /// 0035456 // response to interferon-beta // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // inferred from electronic annotation /// 0046597 // negative regulation of viral entry into host cell // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 0060337 // type I interferon signaling pathway // traceable author statement </td> <td> 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 43.35 </td> <td> 950.62 </td> <td> 0.44 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211452_x_at </td> <td> 211452_x_at </td> <td> AF130054 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF130054.1 /DEF=Homo sapiens clone FLB4816 PRO1252 mRNA, complete cds. /FEA=mRNA /PROD=PRO1252 /DB_XREF=gi:11493414 /UG=Hs.326159 leucine rich repeat (in FLII) interacting protein 1 /FL=gb:AF130054.1 </td> <td> AF130054 </td> <td> leucine rich repeat (in FLII) interacting protein 1 </td> <td> LRRFIP1 </td> <td> 9208 </td> <td> NM_001137550 /// NM_001137551 /// NM_001137552 /// NM_001137553 /// NM_004735 /// XM_005246112 /// XM_005246113 /// XM_005246114 /// XM_005246115 /// XM_005246116 /// XM_005246117 /// XM_005246118 /// XM_005246119 /// XM_005246120 /// XM_005246121 /// XM_005246122 /// XM_005246123 /// XM_005246124 /// XM_005246125 /// XM_005246126 /// XM_005246127 /// XM_005246128 /// XM_005246129 /// XM_005246130 /// XM_005246131 /// XM_005246132 /// XM_005246133 /// XM_005246134 /// XM_005246135 /// XM_005246136 /// XM_005246137 /// XM_005246138 /// XM_005246139 /// XM_005246140 /// XM_005246141 /// XM_005246142 /// XM_006712840 /// XM_006712841 /// XM_006712842 /// XM_006712843 /// XM_006712844 /// XM_006712845 /// XM_006712846 /// XM_006712847 /// XM_006712848 /// XM_006712849 /// XM_006712850 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> 19.23 </td> <td> 451.74 </td> <td> 0.44 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201119_s_at </td> <td> 201119_s_at </td> <td> NM_004074 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004074.1 /DEF=Homo sapiens cytochrome c oxidase subunit VIII (COX8), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=COX8 /PROD=cytochrome c oxidase subunit VIII /DB_XREF=gi:4758043 /UG=Hs.81097 cytochrome c oxidase subunit VIII /FL=gb:NM_004074.1 </td> <td> NM_004074 </td> <td> cytochrome c oxidase subunit VIIIA (ubiquitous) </td> <td> COX8A </td> <td> 1351 </td> <td> NM_004074 </td> <td> 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation /// 1902600 // hydrogen ion transmembrane transport // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation </td> <td> 20.93 </td> <td> 1051.94 </td> <td> 0.44 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 219157_at </td> <td> 219157_at </td> <td> NM_007246 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007246.1 /DEF=Homo sapiens kelch (Drosophila)-like 2 (Mayven) (KLHL2), mRNA. /FEA=mRNA /GEN=KLHL2 /PROD=kelch (Drosophila)-like 2 (Mayven) /DB_XREF=gi:6005702 /UG=Hs.122967 kelch (Drosophila)-like 2 (Mayven) /FL=gb:AF059569.1 gb:NM_007246.1 </td> <td> NM_007246 </td> <td> kelch-like family member 2 </td> <td> KLHL2 </td> <td> 11275 </td> <td> NM_001161521 /// NM_001161522 /// NM_007246 /// XM_005262710 /// XM_006714074 </td> <td> 0016567 // protein ubiquitination // inferred from sequence or structural similarity </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> -6.15 </td> <td> 83.60 </td> <td> -0.44 </td> <td> 0.67 </td> <td> 0.73 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202305_s_at </td> <td> 202305_s_at </td> <td> AI685892 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI685892 /FEA=EST /DB_XREF=gi:4897186 /DB_XREF=est:tu38a11.x1 /CLONE=IMAGE:2253308 /UG=Hs.103419 fasciculation and elongation protein zeta 2 (zygin II) /FL=gb:AF113124.1 gb:NM_005102.1 </td> <td> AI685892 </td> <td> fasciculation and elongation protein zeta 2 (zygin II) </td> <td> FEZ2 </td> <td> 9637 </td> <td> NM_001042548 /// NM_005102 /// XM_006712153 /// XR_244972 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement </td> <td>  </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -23.78 </td> <td> 207.86 </td> <td> -0.44 </td> <td> 0.67 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217923_at </td> <td> 217923_at </td> <td> NM_012392 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012392.1 /DEF=Homo sapiens PEF protein with a long N-terminal hydrophobic domain (peflin) (PEF), mRNA.  /FEA=mRNA /GEN=PEF /PROD=peflin /DB_XREF=gi:6912581 /UG=Hs.241531 peflin /FL=gb:BC002773.1 gb:AB018357.1 gb:AB026628.1 gb:NM_012392.1 </td> <td> NM_012392 </td> <td> penta-EF-hand domain containing 1 </td> <td> PEF1 </td> <td> 553115 </td> <td> NM_012392 /// NR_033686 /// NR_033688 </td> <td> 0006508 // proteolysis // not recorded /// 0051592 // response to calcium ion // inferred from physical interaction </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004198 // calcium-dependent cysteine-type endopeptidase activity // not recorded /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from physical interaction </td> <td> 13.75 </td> <td> 304.75 </td> <td> 0.44 </td> <td> 0.67 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203157_s_at </td> <td> 203157_s_at </td> <td> AB020645 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB020645.1 /DEF=Homo sapiens mRNA for KIAA0838 protein, complete cds. /FEA=mRNA /GEN=KIAA0838 /PROD=KIAA0838 protein /DB_XREF=gi:4240164 /UG=Hs.239189 glutaminase /FL=gb:AF327434.1 gb:AB020645.1 gb:AF097493.1 gb:AF223943.1 gb:NM_014905.1 </td> <td> AB020645 </td> <td> glutaminase </td> <td> GLS </td> <td> 2744 </td> <td> NM_001256310 /// NM_014905 /// XM_005246467 /// XM_006712435 /// XM_006712436 /// XR_241306 </td> <td> 0001967 // suckling behavior // inferred from electronic annotation /// 0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0006537 // glutamate biosynthetic process // inferred from direct assay /// 0006537 // glutamate biosynthetic process // traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0006543 // glutamine catabolic process // inferred from direct assay /// 0006543 // glutamine catabolic process // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0014047 // glutamate secretion // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation </td> <td> 0004359 // glutaminase activity // inferred from direct assay /// 0004359 // glutaminase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 6.12 </td> <td> 62.04 </td> <td> 0.44 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 36994_at </td> <td> 36994_at </td> <td> M62762 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. M62762:Human vacuolar H+ ATPase proton channel subunit mRNA, complete cds /cds=(230,697) /gb=M62762 /gi=189675 /ug=Hs.76159 /len=1162 </td> <td> M62762 </td> <td> ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c </td> <td> ATP6V0C </td> <td> 527 </td> <td> NM_001198569 /// NM_001694 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from mutant phenotype /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005773 // vacuole // inferred from electronic annotation /// 0005774 // vacuolar membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // traceable author statement /// 0046961 // proton-transporting ATPase activity, rotational mechanism // traceable author statement </td> <td> 18.85 </td> <td> 814.08 </td> <td> 0.43 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218493_at </td> <td> 218493_at </td> <td> NM_024571 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024571.1 /DEF=Homo sapiens hypothetical protein FLJ22940 (FLJ22940), mRNA. /FEA=mRNA /GEN=FLJ22940 /PROD=hypothetical protein FLJ22940 /DB_XREF=gi:13443017 /UG=Hs.15277 hypothetical protein FLJ22940 /FL=gb:BC001381.1 gb:NM_024571.1 </td> <td> NM_024571 </td> <td> small nuclear ribonucleoprotein 25kDa (U11/U12) </td> <td> SNRNP25 </td> <td> 79622 </td> <td> NM_024571 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred by curator </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0045171 // intercellular bridge // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 7.88 </td> <td> 159.04 </td> <td> 0.43 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218005_at </td> <td> 218005_at </td> <td> AA744771 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA744771 /FEA=EST /DB_XREF=gi:2783535 /DB_XREF=est:ny71d07.s1 /CLONE=IMAGE:1283725 /UG=Hs.108642 zinc finger protein 22 (KOX 15) /FL=gb:NM_006963.1 </td> <td> AA744771 </td> <td> zinc finger protein 22 </td> <td> ZNF22 </td> <td> 7570 </td> <td> NM_006963 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0042476 // odontogenesis // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 7.22 </td> <td> 357.46 </td> <td> 0.43 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212071_s_at </td> <td> 212071_s_at </td> <td> BE968833 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE968833 /FEA=EST /DB_XREF=gi:10579538 /DB_XREF=est:601649861F1 /CLONE=IMAGE:3933782 /UG=Hs.324648 Homo sapiens cDNA FLJ13700 fis, clone PLACE2000216, highly similar to SPECTRIN BETA CHAIN, BRAIN </td> <td> BE968833 </td> <td> spectrin, beta, non-erythrocytic 1 </td> <td> SPTBN1 </td> <td> 6711 </td> <td> NM_003128 /// NM_178313 /// XM_005264517 /// XM_005264518 /// XM_006712087 </td> <td> 0000281 // mitotic cytokinesis // inferred from mutant phenotype /// 0007009 // plasma membrane organization // inferred from mutant phenotype /// 0007182 // common-partner SMAD protein phosphorylation // inferred from electronic annotation /// 0007184 // SMAD protein import into nucleus // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0043001 // Golgi to plasma membrane protein transport // inferred from mutant phenotype /// 0051693 // actin filament capping // inferred from electronic annotation /// 0071709 // membrane assembly // inferred from mutant phenotype /// 0072661 // protein targeting to plasma membrane // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008091 // spectrin // inferred from electronic annotation /// 0014731 // spectrin-associated cytoskeleton // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030673 // axolemma // inferred from sequence or structural similarity /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031430 // M band // inferred from electronic annotation /// 0032437 // cuticular plate // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction /// 0030506 // ankyrin binding // non-traceable author statement /// 0032403 // protein complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -59.70 </td> <td> 1543.58 </td> <td> -0.43 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201730_s_at </td> <td> 201730_s_at </td> <td> BF110993 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF110993 /FEA=EST /DB_XREF=gi:10940683 /DB_XREF=est:7n42e09.x1 /CLONE=IMAGE:3567448 /UG=Hs.169750 translocated promoter region (to activated MET oncogene) /FL=gb:NM_003292.1 </td> <td> BF110993 </td> <td> translocated promoter region, nuclear basket protein </td> <td> TPR </td> <td> 7175 </td> <td> NM_003292 /// XM_005245471 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000189 // MAPK import into nucleus // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0000738 // DNA catabolic process, exonucleolytic // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006308 // DNA catabolic process // inferred from electronic annotation /// 0006404 // RNA import into nucleus // inferred from direct assay /// 0006405 // RNA export from nucleus // inferred from mutant phenotype /// 0006434 // seryl-tRNA aminoacylation // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006606 // protein import into nucleus // inferred from mutant phenotype /// 0006611 // protein export from nucleus // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006999 // nuclear pore organization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0007094 // mitotic spindle assembly checkpoint // inferred from mutant phenotype /// 0008645 // hexose transport // traceable author statement /// 0010793 // regulation of mRNA export from nucleus // inferred from mutant phenotype /// 0010827 // regulation of glucose transport // traceable author statement /// 0010965 // regulation of mitotic sister chromatid separation // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031453 // positive regulation of heterochromatin assembly // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0031990 // mRNA export from nucleus in response to heat stress // inferred from direct assay /// 0034605 // cellular response to heat // inferred from direct assay /// 0035457 // cellular response to interferon-alpha // inferred from sequence or structural similarity /// 0042306 // regulation of protein import into nucleus // inferred from mutant phenotype /// 0042307 // positive regulation of protein import into nucleus // inferred from mutant phenotype /// 0043578 // nuclear matrix organization // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0045947 // negative regulation of translational initiation // inferred from mutant phenotype /// 0046825 // regulation of protein export from nucleus // inferred from mutant phenotype /// 0046827 // positive regulation of protein export from nucleus // inferred from sequence or structural similarity /// 0046832 // negative regulation of RNA export from nucleus // inferred from direct assay /// 0046832 // negative regulation of RNA export from nucleus // inferred from mutant phenotype /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051292 // nuclear pore complex assembly // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0070849 // response to epidermal growth factor // inferred from direct assay /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from mutant phenotype /// 0090316 // positive regulation of intracellular protein transport // inferred from mutant phenotype /// 1901673 // regulation of spindle assembly involved in mitosis // inferred from mutant phenotype </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from direct assay /// 0005643 // nuclear pore // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from direct assay /// 0009318 // exodeoxyribonuclease VII complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic component of membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0034399 // nuclear periphery // inferred from direct assay /// 0042405 // nuclear inclusion body // inferred from direct assay /// 0044615 // nuclear pore nuclear basket // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003729 // mRNA binding // inferred from direct assay /// 0004828 // serine-tRNA ligase activity // inferred from electronic annotation /// 0005215 // transporter activity // inferred from mutant phenotype /// 0005487 // nucleocytoplasmic transporter activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008855 // exodeoxyribonuclease VII activity // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from direct assay /// 0031072 // heat shock protein binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043495 // protein anchor // inferred from mutant phenotype /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051019 // mitogen-activated protein kinase binding // inferred from direct assay /// 0070840 // dynein complex binding // inferred from direct assay </td> <td> 13.30 </td> <td> 334.38 </td> <td> 0.43 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212591_at </td> <td> 212591_at </td> <td> AA887480 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA887480 /FEA=EST /DB_XREF=gi:3003168 /DB_XREF=est:oj54a12.s1 /CLONE=IMAGE:1502110 /UG=Hs.17428 RBP1-like protein </td> <td> AA887480 </td> <td> AT rich interactive domain 4B (RBP1-like) /// RNA binding motif protein 34 </td> <td> ARID4B /// RBM34 </td> <td> 23029 /// 51742 </td> <td> NM_001161533 /// NM_001206794 /// NM_015014 /// NM_016374 /// NM_031371 /// NR_027762 /// XM_005273160 /// XM_006711781 </td> <td> 0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0034773 // histone H4-K20 trimethylation // inferred from electronic annotation /// 0036124 // histone H3-K9 trimethylation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 7.62 </td> <td> 148.91 </td> <td> 0.43 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 35201_at </td> <td> 35201_at </td> <td> X16135 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. X16135:Human mRNA for novel heterogeneous nuclear RNP protein, L protein /cds=(28,1704) /gb=X16135 /gi=32355 /ug=Hs.2730 /len=2033 </td> <td> X16135 </td> <td> heterogeneous nuclear ribonucleoprotein L </td> <td> HNRNPL </td> <td> 3191 </td> <td> NM_001005335 /// NM_001533 /// XR_243927 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 18.55 </td> <td> 219.70 </td> <td> 0.43 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 205392_s_at </td> <td> 205392_s_at </td> <td> NM_004166 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004166.1 /DEF=Homo sapiens small inducible cytokine subfamily A (Cys-Cys), member 14 (SCYA14), mRNA.  /FEA=mRNA /GEN=SCYA14 /PROD=small inducible cytokine subfamily A (Cys-Cys),member 14 /DB_XREF=gi:4759069 /UG=Hs.20144 small inducible cytokine subfamily A (Cys-Cys), member 14 /FL=gb:NM_004166.1 </td> <td> NM_004166 </td> <td> chemokine (C-C motif) ligand 14 /// CCL15-CCL14 readthrough (NMD candidate) </td> <td> CCL14 /// CCL15-CCL14 </td> <td> 6358 /// 348249 </td> <td> NM_004166 /// NM_032962 /// NM_032963 /// NR_027921 /// NR_027922 </td> <td> 0006874 // cellular calcium ion homeostasis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006935 // chemotaxis // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0050918 // positive chemotaxis // inferred from direct assay /// 0060326 // cell chemotaxis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation </td> <td> 0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0042056 // chemoattractant activity // inferred from direct assay </td> <td> 9.63 </td> <td> 158.61 </td> <td> 0.43 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201499_s_at </td> <td> 201499_s_at </td> <td> NM_003470 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003470.1 /DEF=Homo sapiens ubiquitin specific protease 7 (herpes virus-associated) (USP7), mRNA.  /FEA=mRNA /GEN=USP7 /PROD=ubiquitin specific protease 7 (herpesvirus-associated) /DB_XREF=gi:4507856 /UG=Hs.78683 ubiquitin specific protease 7 (herpes virus-associated) /FL=gb:NM_003470.1 </td> <td> NM_003470 </td> <td> ubiquitin specific peptidase 7 (herpes virus-associated) </td> <td> USP7 </td> <td> 7874 </td> <td> NM_001286457 /// NM_001286458 /// NM_003470 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010216 // maintenance of DNA methylation // inferred from mutant phenotype /// 0016032 // viral process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from mutant phenotype /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation </td> <td> 0002039 // p53 binding // inferred from direct assay /// 0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0036459 // ubiquitinyl hydrolase activity // inferred from electronic annotation </td> <td> 12.08 </td> <td> 640.64 </td> <td> 0.43 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211714_x_at </td> <td> 211714_x_at </td> <td> BC005838 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005838.1 /DEF=Homo sapiens, tubulin, beta 5, clone MGC:2440, mRNA, complete cds. /FEA=mRNA /PROD=tubulin, beta 5 /DB_XREF=gi:13543349 /FL=gb:BC005838.1 </td> <td> BC005838 </td> <td> tubulin, beta class I </td> <td> TUBB </td> <td> 203068 </td> <td> NM_001293212 /// NM_001293213 /// NM_001293214 /// NM_001293215 /// NM_001293216 /// NM_178014 /// NR_120608 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0007017 // microtubule-based process // traceable author statement /// 0009987 // cellular process // inferred from direct assay /// 0030705 // cytoskeleton-dependent intracellular transport // traceable author statement /// 0042267 // natural killer cell mediated cytotoxicity // non-traceable author statement /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051297 // centrosome organization // inferred from electronic annotation /// 0051301 // cell division // traceable author statement </td> <td> 0000242 // pericentriolar material // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005641 // nuclear envelope lumen // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0044297 // cell body // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0032794 // GTPase activating protein binding // inferred from electronic annotation /// 0042288 // MHC class I protein binding // inferred from direct assay </td> <td> -108.57 </td> <td> 3052.94 </td> <td> -0.43 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211940_x_at </td> <td> 211940_x_at </td> <td> BE869922 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE869922 /FEA=EST /DB_XREF=gi:10318698 /DB_XREF=est:601446568F1 /CLONE=IMAGE:3850432 /UG=Hs.181307 H3 histone, family 3A </td> <td> BE869922 </td> <td> H3 histone, family 3A /// H3 histone, family 3A, pseudogene 4 /// H3 histone, family 3B (H3.3B) </td> <td> H3F3A /// H3F3AP4 /// H3F3B </td> <td> 3020 /// 3021 /// 440926 </td> <td> NM_002107 /// NM_005324 /// NR_002315 </td> <td> 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006336 // DNA replication-independent nucleosome assembly // inferred from direct assay /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype </td> <td> 0000228 // nuclear chromosome // inferred from direct assay /// 0000786 // nucleosome // inferred from electronic annotation /// 0000788 // nuclear nucleosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -67.18 </td> <td> 2051.96 </td> <td> -0.43 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201172_x_at </td> <td> 201172_x_at </td> <td> NM_003945 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003945.1 /DEF=Homo sapiens ATPase, H+ transporting, lysosomal (vacuolar proton pump) 9kD (ATP6H), mRNA.  /FEA=mRNA /GEN=ATP6H /PROD=ATPase, H+ transporting, lysosomal (vacuolarproton pump) 9kD /DB_XREF=gi:4502318 /UG=Hs.24322 ATPase, H+ transporting, lysosomal (vacuolar proton pump) 9kD /FL=gb:NM_003945.1 </td> <td> NM_003945 </td> <td> ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 </td> <td> ATP6V0E1 </td> <td> 8992 </td> <td> NM_003945 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0016049 // cell growth // inferred from genetic interaction /// 0033572 // transferrin transport // traceable author statement /// 0043200 // response to amino acid // inferred from electronic annotation /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042625 // ATPase activity, coupled to transmembrane movement of ions // inferred from sequence or structural similarity /// 0046961 // proton-transporting ATPase activity, rotational mechanism // traceable author statement </td> <td> -20.83 </td> <td> 1049.29 </td> <td> -0.43 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212009_s_at </td> <td> 212009_s_at </td> <td> AL553320 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL553320 /FEA=EST /DB_XREF=gi:12893045 /DB_XREF=est:AL553320 /CLONE=CS0DI075YG04 (5 prime) /UG=Hs.75612 stress-induced-phosphoprotein 1 (Hsp70Hsp90-organizing protein) </td> <td> AL553320 </td> <td> stress-induced phosphoprotein 1 </td> <td> STIP1 </td> <td> 10963 </td> <td> NM_001282652 /// NM_001282653 /// NM_006819 </td> <td> 0006950 // response to stress // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from electronic annotation </td> <td> 8.70 </td> <td> 164.57 </td> <td> 0.42 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 214938_x_at </td> <td> 214938_x_at </td> <td> AF283771 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AF283771.2 /DEF=Homo sapiens clone TCBAP0774 mRNA sequence. /FEA=mRNA /DB_XREF=gi:10281740 /UG=Hs.274472 high-mobility group (nonhistone chromosomal) protein 1 </td> <td> AF283771 </td> <td> high mobility group box 1 </td> <td> HMGB1 </td> <td> 3146 </td> <td> NM_002128 /// XM_005266363 /// XM_005266365 /// XM_005266368 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001773 // myeloid dendritic cell activation // inferred from sequence or structural similarity /// 0002407 // dendritic cell chemotaxis // inferred from sequence or structural similarity /// 0002437 // inflammatory response to antigenic stimulus // inferred from expression pattern /// 0006265 // DNA topological change // inferred from sequence or structural similarity /// 0006288 // base-excision repair, DNA ligation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006310 // DNA recombination // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0017055 // negative regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0033151 // V(D)J recombination // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050918 // positive chemotaxis // inferred from sequence or structural similarity /// 0051103 // DNA ligation involved in DNA repair // inferred from sequence or structural similarity /// 2000426 // negative regulation of apoptotic cell clearance // inferred from electronic annotation </td> <td> 0000793 // condensed chromosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from sequence or structural similarity /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008301 // DNA binding, bending // inferred from mutant phenotype /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0042056 // chemoattractant activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050786 // RAGE receptor binding // inferred from sequence or structural similarity /// 0070491 // repressing transcription factor binding // inferred from physical interaction </td> <td> -54.88 </td> <td> 2955.54 </td> <td> -0.42 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210830_s_at </td> <td> 210830_s_at </td> <td> AF001602 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF001602.1 /DEF=Homo sapiens paraoxonase (PON2) mRNA, with alternatively spliced exon 3, complete cds.  /FEA=mRNA /GEN=PON2 /PROD=paraoxonase /DB_XREF=gi:2228776 /UG=Hs.169857 paraoxonase 2 /FL=gb:AF001602.1 </td> <td> AF001602 </td> <td> paraoxonase 2 </td> <td> PON2 </td> <td> 5445 </td> <td> NM_000305 /// NM_001018161 /// XM_005250453 /// XM_005250454 </td> <td> 0006979 // response to oxidative stress // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0019439 // aromatic compound catabolic process // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004064 // arylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 10.30 </td> <td> 351.93 </td> <td> 0.42 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201103_x_at </td> <td> 201103_x_at </td> <td> BE299495 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE299495 /FEA=EST /DB_XREF=gi:9183243 /DB_XREF=est:600944774T1 /CLONE=IMAGE:2960610 /UG=Hs.218329 hypothetical protein /FL=gb:NM_015383.1 </td> <td> BE299495 </td> <td> neuroblastoma breakpoint family, member 10 /// neuroblastoma breakpoint family, member 11 /// neuroblastoma breakpoint family, member 12 /// neuroblastoma breakpoint family, member 14 /// neuroblastoma breakpoint family, member 15 /// neuroblastoma breakpoint family, member 20 /// neuroblastoma breakpoint family, member 8 /// neuroblastoma breakpoint family, member 9 </td> <td> NBPF10 /// NBPF11 /// NBPF12 /// NBPF14 /// NBPF15 /// NBPF20 /// NBPF8 /// NBPF9 </td> <td> 25832 /// 149013 /// 200030 /// 284565 /// 400818 /// 728841 /// 100132406 /// 100288142 </td> <td> NM_001037501 /// NM_001037675 /// NM_001039703 /// NM_001101663 /// NM_001102663 /// NM_001170755 /// NM_001277444 /// NM_001278141 /// NM_001278267 /// NM_015383 /// NM_173638 /// NM_183372 /// NR_046188 /// NR_102404 /// NR_102405 /// NR_110864 /// XM_005245096 /// XM_005245097 /// XM_005277342 /// XM_005277343 /// XM_005277344 /// XM_005277345 /// XM_005277346 /// XM_005277347 /// XM_006710872 /// XM_006711103 /// XM_006711104 /// XM_006711179 /// XM_006711180 /// XM_006711181 /// XM_006711182 /// XM_006711197 /// XM_006711265 /// XM_006711317 /// XR_254328 /// XR_426769 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -40.15 </td> <td> 840.02 </td> <td> -0.42 </td> <td> 0.68 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217713_x_at </td> <td> 217713_x_at </td> <td> AA126763 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA126763 /FEA=EST /DB_XREF=gi:1686263 /DB_XREF=est:zn87b11.s1 /CLONE=IMAGE:565149 /UG=Hs.182296 ESTs, Weakly similar to ALU6_HUMAN ALU SUBFAMILY SP SEQUENCE CONTAMINATION WARNING ENTRY H.sapiens </td> <td> AA126763 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -5.88 </td> <td> 77.41 </td> <td> -0.42 </td> <td> 0.69 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 205711_x_at </td> <td> 205711_x_at </td> <td> NM_005174 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005174.1 /DEF=Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 (ATP5C1), mRNA.  /FEA=mRNA /GEN=ATP5C1 /PROD=ATP synthase, H+ transporting, mitochondrial F1complex, gamma polypeptide 1 /DB_XREF=gi:4885078 /UG=Hs.155433 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 /FL=gb:D16563.1 gb:NM_005174.1 </td> <td> NM_005174 </td> <td> ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 </td> <td> ATP5C1 </td> <td> 509 </td> <td> NM_001001973 /// NM_005174 </td> <td> 0006119 // oxidative phosphorylation // non-traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // non-traceable author statement /// 0006754 // ATP biosynthetic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) // non-traceable author statement /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // non-traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // non-traceable author statement /// 0022857 // transmembrane transporter activity // inferred by curator /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation </td> <td> -23.88 </td> <td> 996.24 </td> <td> -0.42 </td> <td> 0.69 </td> <td> 0.74 </td> <td> -4.62 </td> </tr>
  <tr> <td> 204468_s_at </td> <td> 204468_s_at </td> <td> NM_005424 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005424.1 /DEF=Homo sapiens tyrosine kinase with immunoglobulin and epidermal growth factor homology domains (TIE), mRNA.  /FEA=mRNA /GEN=TIE /PROD=tyrosine kinase with immunoglobulin andepidermal growth factor homology domains /DB_XREF=gi:4885630 /UG=Hs.78824 tyrosine kinase with immunoglobulin and epidermal growth factor homology domains /FL=gb:NM_005424.1 </td> <td> NM_005424 </td> <td> tyrosine kinase with immunoglobulin-like and EGF-like domains 1 </td> <td> TIE1 </td> <td> 7075 </td> <td> NM_001253357 /// NM_005424 /// XM_005271163 /// XM_005271164 /// XM_006710869 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007498 // mesoderm development // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0045026 // plasma membrane fusion // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -20.52 </td> <td> 889.69 </td> <td> -0.42 </td> <td> 0.69 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201264_at </td> <td> 201264_at </td> <td> NM_007263 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007263.1 /DEF=Homo sapiens coatomer protein complex, subunit epsilon (COPE), mRNA.  /FEA=mRNA /GEN=COPE /PROD=coatomer protein complex, subunit epsilon /DB_XREF=gi:6005734 /UG=Hs.10326 coatomer protein complex, subunit epsilon /FL=gb:AL136928.1 gb:BC003155.1 gb:NM_007263.1 </td> <td> NM_007263 </td> <td> coatomer protein complex, subunit epsilon </td> <td> COPE </td> <td> 11316 </td> <td> NM_007263 /// NM_199442 /// NM_199444 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030137 // COPI-coated vesicle // inferred from electronic annotation /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation </td> <td> 15.62 </td> <td> 369.94 </td> <td> 0.42 </td> <td> 0.69 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 222146_s_at </td> <td> 222146_s_at </td> <td> AK026674 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026674.1 /DEF=Homo sapiens cDNA: FLJ23021 fis, clone LNG01014, highly similar to HUMSEF21B Human SEF2-1B protein (SEF2-1B) mRNA.  /FEA=mRNA /DB_XREF=gi:10439577 /UG=Hs.326198 transcription factor 4 </td> <td> AK026674 </td> <td> transcription factor 4 </td> <td> TCF4 </td> <td> 6925 </td> <td> NM_001083962 /// NM_001243226 /// NM_001243227 /// NM_001243228 /// NM_001243230 /// NM_001243231 /// NM_001243232 /// NM_001243233 /// NM_001243234 /// NM_001243235 /// NM_001243236 /// NM_003199 /// XM_005266739 /// XM_005266741 /// XM_005266743 /// XM_005266744 /// XM_005266745 /// XM_005266746 /// XM_005266747 /// XM_005266749 /// XM_005266750 /// XM_005266752 /// XM_005266754 /// XM_005266755 /// XM_005266761 /// XM_006722529 /// XM_006722530 /// XM_006722531 /// XM_006722532 /// XM_006722533 /// XM_006722534 /// XM_006722535 /// XM_006722536 /// XM_006722537 /// XM_006722538 /// XM_006722539 /// XM_006722540 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006352 // DNA-templated transcription, initiation // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from sequence or structural similarity </td> <td> -16.70 </td> <td> 209.90 </td> <td> -0.42 </td> <td> 0.69 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201476_s_at </td> <td> 201476_s_at </td> <td> AI692974 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI692974 /FEA=EST /DB_XREF=gi:4970314 /DB_XREF=est:wd36e03.x1 /CLONE=IMAGE:2330236 /UG=Hs.2934 ribonucleotide reductase M1 polypeptide /FL=gb:NM_001033.1 </td> <td> AI692974 </td> <td> ribonucleotide reductase M1 </td> <td> RRM1 </td> <td> 6240 </td> <td> NM_001033 </td> <td> 0000278 // mitotic cell cycle // inferred from electronic annotation /// 0006206 // pyrimidine nucleobase metabolic process // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from sequence or structural similarity /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0021846 // cell proliferation in forebrain // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation </td> <td> 0005635 // nuclear envelope // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005971 // ribonucleoside-diphosphate reductase complex // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0017076 // purine nucleotide binding // inferred from electronic annotation </td> <td> -12.07 </td> <td> 157.64 </td> <td> -0.42 </td> <td> 0.69 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218256_s_at </td> <td> 218256_s_at </td> <td> NM_017426 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017426.1 /DEF=Homo sapiens nucleoporin p54 (NUP54), mRNA. /FEA=mRNA /GEN=NUP54 /PROD=nucleoporin p54 /DB_XREF=gi:8393857 /UG=Hs.9082 nucleoporin p54 /FL=gb:AF157322.1 gb:NM_017426.1 </td> <td> NM_017426 </td> <td> nucleoporin 54kDa </td> <td> NUP54 </td> <td> 53371 </td> <td> NM_001278603 /// NM_017426 /// NR_103780 /// NR_103781 /// NR_103782 /// XM_006714236 /// XM_006714237 /// XM_006714238 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation </td> <td> 0005487 // nucleocytoplasmic transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 15.05 </td> <td> 214.95 </td> <td> 0.42 </td> <td> 0.69 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217971_at </td> <td> 217971_at </td> <td> NM_021970 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021970.1 /DEF=Homo sapiens MEK partner 1 (MP1), mRNA. /FEA=mRNA /GEN=MP1 /PROD=MEK partner 1 /DB_XREF=gi:11496276 /UG=Hs.6361 MEK partner 1 /FL=gb:AF130115.1 gb:NM_021970.1 gb:AF201947.1 </td> <td> NM_021970 </td> <td> late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 </td> <td> LAMTOR3 </td> <td> 8649 </td> <td> NM_001243736 /// NM_021970 /// NR_024170 </td> <td> 0016310 // phosphorylation // inferred from electronic annotation /// 0032006 // regulation of TOR signaling // inferred from electronic annotation /// 0032008 // positive regulation of TOR signaling // inferred from mutant phenotype /// 0034613 // cellular protein localization // inferred from mutant phenotype /// 0043087 // regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0071230 // cellular response to amino acid stimulus // inferred from mutant phenotype </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071986 // Ragulator complex // inferred from direct assay </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from direct assay </td> <td> -12.72 </td> <td> 181.34 </td> <td> -0.41 </td> <td> 0.69 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217882_at </td> <td> 217882_at </td> <td> NM_018447 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018447.1 /DEF=Homo sapiens 30 kDa protein (LOC55831), mRNA. /FEA=mRNA /GEN=LOC55831 /PROD=30 kDa protein /DB_XREF=gi:8923856 /UG=Hs.283714 30 kDa protein /FL=gb:AF157321.1 gb:NM_018447.1 </td> <td> NM_018447 </td> <td> ER membrane protein complex subunit 3 </td> <td> EMC3 </td> <td> 55831 </td> <td> NM_018447 /// XM_005265321 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0072546 // ER membrane protein complex // inferred from direct assay </td> <td>  </td> <td> -10.13 </td> <td> 287.21 </td> <td> -0.41 </td> <td> 0.69 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 38707_r_at </td> <td> 38707_r_at </td> <td> S75174 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. S75174:E2F-4=transcription factor [human, Nalm6 and HeLa cells, mRNA, 1539 nt] /cds=(54,1304) /gb=S75174 /gi=802120 /ug=Hs.108371 /len=1539 </td> <td> S75174 </td> <td> E2F transcription factor 4, p107/p130-binding </td> <td> E2F4 </td> <td> 1874 </td> <td> NM_001950 </td> <td> 0000083 // regulation of transcription involved in G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0002064 // epithelial cell development // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006884 // cell volume homeostasis // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0008015 // blood circulation // inferred from electronic annotation /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from mutant phenotype /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction </td> <td> -13.75 </td> <td> 521.33 </td> <td> -0.41 </td> <td> 0.69 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 205361_s_at </td> <td> 205361_s_at </td> <td> AI718295 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI718295 /FEA=EST /DB_XREF=gi:5035551 /DB_XREF=est:as51g04.x1 /CLONE=IMAGE:2320758 /UG=Hs.91161 prefoldin 4 /FL=gb:NM_002623.2 gb:U41816.1 </td> <td> AI718295 </td> <td> prefoldin subunit 4 </td> <td> PFDN4 </td> <td> 5203 </td> <td> NM_002623 </td> <td> 0006457 // protein folding // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0016272 // prefoldin complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // traceable author statement </td> <td> 8.43 </td> <td> 218.34 </td> <td> 0.41 </td> <td> 0.69 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203514_at </td> <td> 203514_at </td> <td> BF971923 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF971923 /FEA=EST /DB_XREF=gi:12339138 /DB_XREF=est:602240326F1 /CLONE=IMAGE:4328791 /UG=Hs.29282 mitogen-activated protein kinase kinase kinase 3 /FL=gb:U78876.1 gb:NM_002401.1 </td> <td> BF971923 </td> <td> mitogen-activated protein kinase kinase kinase 3 </td> <td> MAP3K3 </td> <td> 4215 </td> <td> NM_002401 /// NM_203351 /// XM_005257376 /// XM_005257377 /// XM_005257378 /// XM_006721909 </td> <td> 0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from expression pattern /// 0046777 // protein autophosphorylation // inferred from direct assay </td> <td> 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -8.43 </td> <td> 175.91 </td> <td> -0.41 </td> <td> 0.69 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201063_at </td> <td> 201063_at </td> <td> NM_002901 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002901.1 /DEF=Homo sapiens reticulocalbin 1, EF-hand calcium binding domain (RCN1), mRNA.  /FEA=mRNA /GEN=RCN1 /PROD=reticulocalbin 1 precursor /DB_XREF=gi:4506454 /UG=Hs.167791 reticulocalbin 1, EF-hand calcium binding domain /FL=gb:D42073.1 gb:NM_002901.1 </td> <td> NM_002901 </td> <td> reticulocalbin 1, EF-hand calcium binding domain </td> <td> RCN1 </td> <td> 5954 </td> <td> NM_002901 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 15.65 </td> <td> 715.98 </td> <td> 0.41 </td> <td> 0.69 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 214784_x_at </td> <td> 214784_x_at </td> <td> BE966299 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE966299 /FEA=EST /DB_XREF=gi:11771566 /DB_XREF=est:601660539R1 /CLONE=IMAGE:3906248 /UG=Hs.70500 KIAA0370 protein </td> <td> BE966299 </td> <td> exportin 6 </td> <td> XPO6 </td> <td> 23214 </td> <td> NM_001270940 /// NM_015171 /// XM_005255195 /// XM_005255197 /// XM_005255198 /// XM_005255199 /// XM_005255200 </td> <td> 0006611 // protein export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred by curator /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from direct assay </td> <td> -11.68 </td> <td> 273.29 </td> <td> -0.41 </td> <td> 0.69 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201244_s_at </td> <td> 201244_s_at </td> <td> NM_002880 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002880.1 /DEF=Homo sapiens v-raf-1 murine leukemia viral oncogene homolog 1 (RAF1), mRNA.  /FEA=mRNA /GEN=RAF1 /PROD=v-raf-1 murine leukemia viral oncogene homolog1 /DB_XREF=gi:4506400 /UG=Hs.85181 v-raf-1 murine leukemia viral oncogene homolog 1 /FL=gb:NM_002880.1 </td> <td> NM_002880 </td> <td> Raf-1 proto-oncogene, serine/threonine kinase </td> <td> RAF1 </td> <td> 5894 </td> <td> NM_002880 /// XM_005265355 /// XM_005265357 /// XM_005265358 /// XM_005265359 /// XM_005265360 </td> <td> 0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007190 // activation of adenylate cyclase activity // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0031333 // negative regulation of protein complex assembly // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034220 // ion transmembrane transport // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0042060 // wound healing // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045104 // intermediate filament cytoskeleton organization // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071550 // death-inducing signaling complex assembly // inferred from electronic annotation /// 1902042 // negative regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from electronic annotation /// 2000145 // regulation of cell motility // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from physical interaction /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031143 // pseudopodium // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017016 // Ras GTPase binding // inferred from electronic annotation /// 0031267 // small GTPase binding // inferred from physical interaction /// 0031434 // mitogen-activated protein kinase kinase binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> -8.52 </td> <td> 280.71 </td> <td> -0.41 </td> <td> 0.70 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212647_at </td> <td> 212647_at </td> <td> NM_006270 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_006270.1 /DEF=Homo sapiens related RAS viral (r-ras) oncogene homolog (RRAS), mRNA.  /FEA=CDS /GEN=RRAS /PROD=related RAS viral (r-ras) oncogene homolog /DB_XREF=gi:5454027 /UG=Hs.9651 related RAS viral (r-ras) oncogene homolog /FL=gb:NM_006270.1 </td> <td> NM_006270 </td> <td> related RAS viral (r-ras) oncogene homolog </td> <td> RRAS </td> <td> 6237 </td> <td> NM_006270 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay /// 0032403 // protein complex binding // inferred from direct assay </td> <td> -6.95 </td> <td> 226.57 </td> <td> -0.41 </td> <td> 0.70 </td> <td> 0.75 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201606_s_at </td> <td> 201606_s_at </td> <td> BE796924 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE796924 /FEA=EST /DB_XREF=gi:10218031 /DB_XREF=est:601587284F1 /CLONE=IMAGE:3941445 /UG=Hs.172589 nuclear phosphoprotein similar to S. cerevisiae PWP1 /FL=gb:BC001652.1 gb:L07758.1 gb:NM_007062.1 </td> <td> BE796924 </td> <td> PWP1 homolog (S. cerevisiae) </td> <td> PWP1 </td> <td> 11137 </td> <td> NM_007062 </td> <td> 0006351 // transcription, DNA-templated // traceable author statement </td> <td> 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 14.12 </td> <td> 473.14 </td> <td> 0.40 </td> <td> 0.70 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 213905_x_at </td> <td> 213905_x_at </td> <td> AA845258 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA845258 /FEA=EST /DB_XREF=gi:2931709 /DB_XREF=est:ak84a11.s1 /CLONE=IMAGE:1414556 /UG=Hs.821 biglycan </td> <td> AA845258 </td> <td> biglycan </td> <td> BGN </td> <td> 633 </td> <td> NM_001711 </td> <td> 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0019800 // peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // traceable author statement /// 0030207 // chondroitin sulfate catabolic process // traceable author statement /// 0030208 // dermatan sulfate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0030133 // transport vesicle // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation </td> <td> -14.53 </td> <td> 450.21 </td> <td> -0.40 </td> <td> 0.70 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 214494_s_at </td> <td> 214494_s_at </td> <td> NM_005200 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_005200.1 /DEF=Homo sapiens cell matrix adhesion regulator (CMAR), mRNA. /FEA=CDS /GEN=CMAR /PROD=cell matrix adhesion regulator /DB_XREF=gi:4885142 /UG=Hs.272480 cell matrix adhesion regulator /FL=gb:NM_005200.1 </td> <td> NM_005200 </td> <td> uncharacterized LOC101930112 /// spastic paraplegia 7 (pure and complicated autosomal recessive) </td> <td> LOC101930112 /// SPG7 </td> <td> 6687 /// 101930112 </td> <td> NM_003119 /// NM_199367 /// XM_005256321 /// XM_006721264 /// XM_006721265 /// XM_006721266 /// XR_253599 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008089 // anterograde axon cargo transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // non-traceable author statement /// 0030163 // protein catabolic process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // traceable author statement /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement </td> <td> 8.68 </td> <td> 167.31 </td> <td> 0.40 </td> <td> 0.70 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200604_s_at </td> <td> 200604_s_at </td> <td> M18468 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M18468.1 /DEF=Human cAMP-dependent protein kinase regulatory subunit type I (PRKAR1A) mRNA, complete cds.  /FEA=mRNA /GEN=PRKAR1A /PROD=cAMP-dependent protein kinase regulatory subunittype 1 /DB_XREF=gi:1526988 /UG=Hs.183037 protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) /FL=gb:M18468.1 gb:M33336.1 gb:NM_002734.1 </td> <td> M18468 </td> <td> protein kinase, cAMP-dependent, regulatory, type I, alpha </td> <td> PRKAR1A </td> <td> 5573 </td> <td> NM_001276289 /// NM_001276290 /// NM_001278433 /// NM_002734 /// NM_212471 /// NM_212472 </td> <td> 0001707 // mesoderm formation // inferred from electronic annotation /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007143 // female meiotic division // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045835 // negative regulation of meiosis // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060038 // cardiac muscle cell proliferation // inferred from electronic annotation /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 2000480 // negative regulation of cAMP-dependent protein kinase activity // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005952 // cAMP-dependent protein kinase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031588 // AMP-activated protein kinase complex // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0034236 // protein kinase A catalytic subunit binding // inferred from physical interaction </td> <td> 17.25 </td> <td> 287.72 </td> <td> 0.40 </td> <td> 0.70 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202501_at </td> <td> 202501_at </td> <td> NM_014268 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014268.1 /DEF=Homo sapiens microtubule-associated protein, RPEB family, member 2 (MAPRE2), mRNA.  /FEA=mRNA /GEN=MAPRE2 /PROD=microtubule-associated protein, RPEB family,member 2 /DB_XREF=gi:10346134 /UG=Hs.78335 microtubule-associated protein, RPEB family, member 2 /FL=gb:NM_014268.1 </td> <td> NM_014268 </td> <td> microtubule-associated protein, RP/EB family, member 2 </td> <td> MAPRE2 </td> <td> 10982 </td> <td> NM_001143826 /// NM_001143827 /// NM_001256420 /// NM_014268 /// NR_046177 /// XM_006722375 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation </td> <td> -11.10 </td> <td> 661.88 </td> <td> -0.40 </td> <td> 0.70 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210766_s_at </td> <td> 210766_s_at </td> <td> AF053640 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF053640.1 /DEF=Homo sapiens trachea cellular apoptosis susceptibility protein (CSE1) mRNA, complete cds.  /FEA=mRNA /GEN=CSE1 /PROD=cellular apoptosis susceptibility protein /DB_XREF=gi:3560554 /UG=Hs.90073 chromosome segregation 1 (yeast homolog)-like /FL=gb:AF053640.1 </td> <td> AF053640 </td> <td> CSE1 chromosome segregation 1-like (yeast) </td> <td> CSE1L </td> <td> 1434 </td> <td> NM_001256135 /// NM_001316 /// NM_177436 /// NR_045796 </td> <td> 0006611 // protein export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008262 // importin-alpha export receptor activity // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation </td> <td> 9.00 </td> <td> 222.25 </td> <td> 0.40 </td> <td> 0.70 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217826_s_at </td> <td> 217826_s_at </td> <td> NM_016021 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016021.1 /DEF=Homo sapiens CGI-76 protein (LOC51632), mRNA. /FEA=mRNA /GEN=LOC51632 /PROD=CGI-76 protein /DB_XREF=gi:7706311 /UG=Hs.184325 CGI-76 protein /FL=gb:AF151834.1 gb:AF161502.1 gb:AF151039.1 gb:NM_016021.1 </td> <td> NM_016021 </td> <td> ubiquitin-conjugating enzyme E2, J1 </td> <td> UBE2J1 </td> <td> 51465 </td> <td> NM_016021 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // inferred from mutant phenotype /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> -13.18 </td> <td> 297.11 </td> <td> -0.40 </td> <td> 0.70 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202397_at </td> <td> 202397_at </td> <td> NM_005796 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005796.1 /DEF=Homo sapiens nuclear transport factor 2 (placental protein 15) (PP15), mRNA.  /FEA=mRNA /GEN=PP15 /PROD=nuclear transport factor 2 (placental protein15) /DB_XREF=gi:5031984 /UG=Hs.151734 nuclear transport factor 2 (placental protein 15) /FL=gb:U43939.1 gb:BC002348.1 gb:NM_005796.1 </td> <td> NM_005796 </td> <td> nuclear transport factor 2 /// nuclear transport factor 2 pseudogene 4 </td> <td> NUTF2 /// NUTF2P4 </td> <td> 10204 /// 128322 </td> <td> NM_005796 /// XM_003960108 /// XM_005255771 /// XM_060943 </td> <td> 0006611 // protein export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -10.20 </td> <td> 361.48 </td> <td> -0.40 </td> <td> 0.70 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209306_s_at </td> <td> 209306_s_at </td> <td> AI139569 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI139569 /FEA=EST /DB_XREF=gi:3645541 /DB_XREF=est:qc57a12.x1 /CLONE=IMAGE:1713694 /UG=Hs.153026 SWAP-70 protein /FL=gb:BC000616.1 gb:AF210818.1 </td> <td> AI139569 </td> <td> SWAP switching B-cell complex 70kDa subunit </td> <td> SWAP70 </td> <td> 23075 </td> <td> NM_015055 /// XM_005252829 /// XM_005252830 </td> <td> 0016444 // somatic cell DNA recombination // inferred from electronic annotation /// 0045190 // isotype switching // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation </td> <td> 15.43 </td> <td> 480.49 </td> <td> 0.40 </td> <td> 0.70 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208679_s_at </td> <td> 208679_s_at </td> <td> AF279893 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF279893.1 /DEF=Homo sapiens PNAS-139 mRNA, complete cds. /FEA=mRNA /PROD=PNAS-139 /DB_XREF=gi:12751114 /UG=Hs.83583 actin related protein 23 complex, subunit 2 (34 kD) /FL=gb:BC000590.1 gb:AF279893.1 </td> <td> AF279893 </td> <td> actin related protein 2/3 complex, subunit 2, 34kDa </td> <td> ARPC2 </td> <td> 10109 </td> <td> NM_005731 /// NM_152862 /// XM_006712173 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0010592 // positive regulation of lamellipodium assembly // inferred from mutant phenotype /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from electronic annotation /// 0035650 // AP-1 adaptor complex binding // inferred from electronic annotation /// 0071933 // Arp2/3 complex binding // inferred from electronic annotation </td> <td> 36.15 </td> <td> 1581.65 </td> <td> 0.40 </td> <td> 0.70 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 219356_s_at </td> <td> 219356_s_at </td> <td> NM_016410 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016410.1 /DEF=Homo sapiens hypothetical protein (HSPC177), mRNA. /FEA=mRNA /GEN=HSPC177 /PROD=hypothetical protein /DB_XREF=gi:7705488 /UG=Hs.279777 hypothetical protein /FL=gb:AF161525.1 gb:NM_016410.1 </td> <td> NM_016410 </td> <td> charged multivesicular body protein 5 </td> <td> CHMP5 </td> <td> 51510 </td> <td> NM_001195536 /// NM_016410 </td> <td> 0001919 // regulation of receptor recycling // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -14.95 </td> <td> 199.30 </td> <td> -0.40 </td> <td> 0.70 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218488_at </td> <td> 218488_at </td> <td> NM_020365 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_020365.1 /DEF=Homo sapiens eukaryotic translation initiation factor 2B, subunit 3 (gamma, 58kD) (EIF2B3), mRNA.  /FEA=mRNA /GEN=EIF2B3 /PROD=eukaryotic translation initiation factor 2B,subunit 3 (gamma, 58kD) /DB_XREF=gi:9966778 /UG=Hs.283627 eukaryotic translation initiation factor 2B, subunit 3 (gamma, 58kD) /FL=gb:AF257077.1 gb:NM_020365.1 </td> <td> NM_020365 </td> <td> eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa </td> <td> EIF2B3 </td> <td> 8891 </td> <td> NM_001166588 /// NM_001261418 /// NM_020365 </td> <td> 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009408 // response to heat // inferred from sequence or structural similarity /// 0009408 // response to heat // traceable author statement /// 0009749 // response to glucose // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0014003 // oligodendrocyte development // inferred from mutant phenotype /// 0032057 // negative regulation of translational initiation in response to stress // inferred from sequence or structural similarity /// 0043087 // regulation of GTPase activity // inferred from direct assay /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from mutant phenotype /// 0043434 // response to peptide hormone // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051716 // cellular response to stimulus // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005851 // eukaryotic translation initiation factor 2B complex // inferred from direct assay </td> <td> 0003743 // translation initiation factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // inferred from direct assay /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation </td> <td> 9.02 </td> <td> 198.54 </td> <td> 0.39 </td> <td> 0.71 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210774_s_at </td> <td> 210774_s_at </td> <td> AL162047 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AL162047.1 /DEF=Homo sapiens mRNA; cDNA DKFZp762E1112 (from clone DKFZp762E1112); complete cds.  /FEA=mRNA /GEN=DKFZp762E1112 /PROD=hypothetical protein /DB_XREF=gi:7328089 /UG=Hs.99908 nuclear receptor coactivator 4 /FL=gb:AL162047.1 </td> <td> AL162047 </td> <td> nuclear receptor coactivator 4 </td> <td> NCOA4 </td> <td> 8031 </td> <td> NM_001145260 /// NM_001145261 /// NM_001145262 /// NM_001145263 /// NM_005437 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008584 // male gonad development // traceable author statement /// 0009725 // response to hormone // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement </td> <td> 0005634 // nucleus // traceable author statement </td> <td> 0003713 // transcription coactivator activity // non-traceable author statement /// 0050681 // androgen receptor binding // non-traceable author statement </td> <td> 16.20 </td> <td> 935.02 </td> <td> 0.39 </td> <td> 0.71 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 214512_s_at </td> <td> 214512_s_at </td> <td> NM_006713 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_006713.1 /DEF=Homo sapiens activated RNA polymerase II transcription cofactor 4 (PC4), mRNA.  /FEA=CDS /GEN=PC4 /PROD=activated RNA polymerase II transcriptioncofactor 4 /DB_XREF=gi:5729967 /UG=Hs.74861 activated RNA polymerase II transcription cofactor 4 /FL=gb:U12979.1 gb:NM_006713.1 </td> <td> NM_006713 </td> <td> SUB1 homolog (S. cerevisiae) </td> <td> SUB1 </td> <td> 10923 </td> <td> NM_006713 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 25.68 </td> <td> 459.66 </td> <td> 0.39 </td> <td> 0.71 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208678_at </td> <td> 208678_at </td> <td> BC004443 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004443.1 /DEF=Homo sapiens, ATPase, H+ transporting, lysosomal (vacuolar proton pump) 31kD, clone MGC:4040, mRNA, complete cds.  /FEA=mRNA /PROD=ATPase, H+ transporting, lysosomal (vacuolarproton pump) 31kD /DB_XREF=gi:13325247 /UG=Hs.77805 ATPase, H+ transporting, lysosomal (vacuolar proton pump) 31kD /FL=gb:BC004443.1 gb:NM_001696.1 </td> <td> BC004443 </td> <td> ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 </td> <td> ATP6V1E1 </td> <td> 529 </td> <td> NM_001039366 /// NM_001039367 /// NM_001696 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0033572 // transferrin transport // traceable author statement /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005902 // microvillus // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0016469 // proton-transporting two-sector ATPase complex // traceable author statement /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction </td> <td> -7.75 </td> <td> 290.80 </td> <td> -0.39 </td> <td> 0.71 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209563_x_at </td> <td> 209563_x_at </td> <td> BC000454 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000454.1 /DEF=Homo sapiens, calmodulin 2 (phosphorylase kinase, delta), clone MGC:8460, mRNA, complete cds.  /FEA=mRNA /PROD=calmodulin 2 (phosphorylase kinase, delta) /DB_XREF=gi:12653368 /UG=Hs.182278 calmodulin 2 (phosphorylase kinase, delta) /FL=gb:BC000454.1 </td> <td> BC000454 </td> <td> calmodulin 1 (phosphorylase kinase, delta) /// calmodulin 2 (phosphorylase kinase, delta) /// calmodulin 3 (phosphorylase kinase, delta) </td> <td> CALM1 /// CALM2 /// CALM3 </td> <td> 801 /// 805 /// 808 </td> <td> NM_001166106 /// NM_001743 /// NM_005184 /// NM_006888 /// XM_006720258 </td> <td> 0001975 // response to amphetamine // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0005513 // detection of calcium ion // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007190 // activation of adenylate cyclase activity // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // inferred from direct assay /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred by curator /// 0016056 // rhodopsin mediated signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0022400 // regulation of rhodopsin mediated signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030801 // positive regulation of cyclic nucleotide metabolic process // inferred from direct assay /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0051343 // positive regulation of cyclic-nucleotide phosphodiesterase activity // inferred from direct assay /// 0051412 // response to corticosterone // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay /// 0055117 // regulation of cardiac muscle contraction // inferred from mutant phenotype /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from electronic annotation /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060316 // positive regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0061024 // membrane organization // traceable author statement /// 1901841 // regulation of high voltage-gated calcium channel activity // inferred from electronic annotation /// 1901844 // regulation of cell communication by electrical coupling involved in cardiac conduction // inferred by curator </td> <td> 0000922 // spindle pole // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0030017 // sarcomere // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008179 // adenylate cyclase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0030235 // nitric-oxide synthase regulator activity // inferred from electronic annotation /// 0031432 // titin binding // inferred from physical interaction /// 0031800 // type 3 metabotropic glutamate receptor binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction /// 0031997 // N-terminal myristoylation domain binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation /// 0050998 // nitric-oxide synthase binding // inferred from electronic annotation /// 0072542 // protein phosphatase activator activity // inferred from direct assay </td> <td> 44.53 </td> <td> 1368.71 </td> <td> 0.39 </td> <td> 0.71 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201533_at </td> <td> 201533_at </td> <td> NM_001904 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001904.1 /DEF=Homo sapiens catenin (cadherin-associated protein), beta 1 (88kD) (CTNNB1), mRNA.  /FEA=mRNA /GEN=CTNNB1 /PROD=catenin (cadherin-associated protein), beta 1(88kD) /DB_XREF=gi:4503130 /UG=Hs.171271 catenin (cadherin-associated protein), beta 1 (88kD) /FL=gb:NM_001904.1 </td> <td> NM_001904 </td> <td> catenin (cadherin-associated protein), beta 1, 88kDa </td> <td> CTNNB1 </td> <td> 1499 </td> <td> NM_001098209 /// NM_001098210 /// NM_001904 /// XM_005264886 /// XM_006712983 /// XM_006712984 /// XM_006712985 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000578 // embryonic axis specification // not recorded /// 0000904 // cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001569 // patterning of blood vessels // not recorded /// 0001569 // patterning of blood vessels // inferred by curator /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // not recorded /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // not recorded /// 0001706 // endoderm formation // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001709 // cell fate determination // inferred from electronic annotation /// 0001711 // endodermal cell fate commitment // not recorded /// 0001764 // neuron migration // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // traceable author statement /// 0001840 // neural plate development // inferred from electronic annotation /// 0001889 // liver development // not recorded /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002089 // lens morphogenesis in camera-type eye // inferred from electronic annotation /// 0003136 // negative regulation of heart induction by canonical Wnt signaling pathway // not recorded /// 0003266 // regulation of secondary heart field cardioblast proliferation // inferred from electronic annotation /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // not recorded /// 0003338 // metanephros morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007016 // cytoskeletal anchoring at plasma membrane // not recorded /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007160 // cell-matrix adhesion // not recorded /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007398 // ectoderm development // not recorded /// 0007403 // glial cell fate determination // not recorded /// 0007494 // midgut development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009725 // response to hormone // inferred from electronic annotation /// 0009948 // anterior/posterior axis specification // inferred from electronic annotation /// 0009950 // dorsal/ventral axis specification // not recorded /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // not recorded /// 0009987 // cellular process // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from genetic interaction /// 0010909 // positive regulation of heparan sulfate proteoglycan biosynthetic process // inferred from mutant phenotype /// 0014010 // Schwann cell proliferation // not recorded /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from direct assay /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from mutant phenotype /// 0021819 // layer formation in cerebral cortex // inferred from electronic annotation /// 0022009 // central nervous system vasculogenesis // not recorded /// 0022405 // hair cycle process // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // not recorded /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0030539 // male genitalia development // not recorded /// 0030856 // regulation of epithelial cell differentiation // inferred from electronic annotation /// 0030858 // positive regulation of epithelial cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030902 // hindbrain development // not recorded /// 0030997 // regulation of centriole-centriole cohesion // inferred from direct assay /// 0031016 // pancreas development // not recorded /// 0031069 // hair follicle morphogenesis // not recorded /// 0031641 // regulation of myelination // inferred from electronic annotation /// 0032331 // negative regulation of chondrocyte differentiation // not recorded /// 0032355 // response to estradiol // inferred from direct assay /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0033077 // T cell differentiation in thymus // not recorded /// 0033234 // negative regulation of protein sumoylation // inferred from direct assay /// 0034097 // response to cytokine // inferred from electronic annotation /// 0034333 // adherens junction assembly // inferred from mutant phenotype /// 0034394 // protein localization to cell surface // inferred from mutant phenotype /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0035112 // genitalia morphogenesis // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035315 // hair cell differentiation // traceable author statement /// 0036023 // embryonic skeletal limb joint morphogenesis // inferred from sequence or structural similarity /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042129 // regulation of T cell proliferation // not recorded /// 0042475 // odontogenesis of dentin-containing tooth // not recorded /// 0042493 // response to drug // inferred from expression pattern /// 0042692 // muscle cell differentiation // traceable author statement /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // not recorded /// 0043410 // positive regulation of MAPK cascade // not recorded /// 0043587 // tongue morphogenesis // not recorded /// 0043588 // skin development // inferred from electronic annotation /// 0043627 // response to estrogen // inferred from electronic annotation /// 0044334 // canonical Wnt signaling pathway involved in positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0044336 // canonical Wnt signaling pathway involved in negative regulation of apoptotic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045445 // myoblast differentiation // inferred from electronic annotation /// 0045453 // bone resorption // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045603 // positive regulation of endothelial cell differentiation // inferred from electronic annotation /// 0045667 // regulation of osteoblast differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // not recorded /// 0045670 // regulation of osteoclast differentiation // inferred from electronic annotation /// 0045671 // negative regulation of osteoclast differentiation // not recorded /// 0045743 // positive regulation of fibroblast growth factor receptor signaling pathway // not recorded /// 0045765 // regulation of angiogenesis // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048145 // regulation of fibroblast proliferation // traceable author statement /// 0048262 // determination of dorsal/ventral asymmetry // not recorded /// 0048469 // cell maturation // inferred from electronic annotation /// 0048489 // synaptic vesicle transport // not recorded /// 0048513 // organ development // inferred from electronic annotation /// 0048538 // thymus development // not recorded /// 0048599 // oocyte development // not recorded /// 0048617 // embryonic foregut morphogenesis // not recorded /// 0048660 // regulation of smooth muscle cell proliferation // inferred from mutant phenotype /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0050808 // synapse organization // not recorded /// 0051145 // smooth muscle cell differentiation // not recorded /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0060066 // oviduct development // inferred from electronic annotation /// 0060070 // canonical Wnt signaling pathway // inferred from direct assay /// 0060173 // limb development // inferred from electronic annotation /// 0060439 // trachea morphogenesis // inferred from electronic annotation /// 0060440 // trachea formation // not recorded /// 0060441 // epithelial tube branching involved in lung morphogenesis // inferred from electronic annotation /// 0060479 // lung cell differentiation // not recorded /// 0060484 // lung-associated mesenchyme development // not recorded /// 0060492 // lung induction // not recorded /// 0060742 // epithelial cell differentiation involved in prostate gland development // inferred from electronic annotation /// 0060769 // positive regulation of epithelial cell proliferation involved in prostate gland development // not recorded /// 0060789 // hair follicle placode formation // not recorded /// 0060916 // mesenchymal cell proliferation involved in lung development // not recorded /// 0061047 // positive regulation of branching involved in lung morphogenesis // not recorded /// 0061154 // endothelial tube morphogenesis // inferred from mutant phenotype /// 0061198 // fungiform papilla formation // inferred from electronic annotation /// 0061324 // canonical Wnt signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation // inferred from sequence or structural similarity /// 0070602 // regulation of centromeric sister chromatid cohesion // inferred from mutant phenotype /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from mutant phenotype /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071681 // cellular response to indole-3-methanol // inferred from direct assay /// 0072001 // renal system development // inferred from electronic annotation /// 0072033 // renal vesicle formation // not recorded /// 0072053 // renal inner medulla development // not recorded /// 0072054 // renal outer medulla development // not recorded /// 0072079 // nephron tubule formation // not recorded /// 0072182 // regulation of nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity /// 0090279 // regulation of calcium ion import // inferred from direct assay /// 2000008 // regulation of protein localization to cell surface // inferred from direct assay /// 2000017 // positive regulation of determination of dorsal identity // inferred from electronic annotation /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005915 // zonula adherens // not recorded /// 0005916 // fascia adherens // not recorded /// 0005924 // cell-substrate adherens junction // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0009898 // cytoplasmic side of plasma membrane // not recorded /// 0014704 // intercalated disc // inferred from electronic annotation /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0016342 // catenin complex // inferred from direct assay /// 0030018 // Z disc // not recorded /// 0030027 // lamellipodium // not recorded /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // traceable author statement /// 0030057 // desmosome // not recorded /// 0030877 // beta-catenin destruction complex // inferred from direct assay /// 0031253 // cell projection membrane // inferred from electronic annotation /// 0031528 // microvillus membrane // not recorded /// 0032993 // protein-DNA complex // inferred from direct assay /// 0034750 // Scrib-APC-beta-catenin complex // inferred from electronic annotation /// 0043198 // dendritic shaft // not recorded /// 0043234 // protein complex // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0070369 // beta-catenin-TCF7L2 complex // inferred from direct assay /// 0071664 // catenin-TCF7L2 complex // inferred from electronic annotation /// 0071944 // cell periphery // inferred from direct assay </td> <td> 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0004871 // signal transducer activity // non-traceable author statement /// 0005198 // structural molecule activity // not recorded /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // not recorded /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0035257 // nuclear hormone receptor binding // inferred from physical interaction /// 0035257 // nuclear hormone receptor binding // traceable author statement /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044325 // ion channel binding // inferred from physical interaction /// 0045294 // alpha-catenin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from physical interaction /// 0050681 // androgen receptor binding // non-traceable author statement /// 0070411 // I-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction /// 0070491 // repressing transcription factor binding // inferred from electronic annotation </td> <td> 15.42 </td> <td> 363.96 </td> <td> 0.39 </td> <td> 0.71 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217379_at </td> <td> 217379_at </td> <td> AL121934 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL121934 /DEF=Human DNA sequence from clone RP11-209A2 on chromosome 6. Contains an RPL10 (60S ribosomal protein L10) pseudogene, ESTs, STSs and GSSs /FEA=CDS /DB_XREF=gi:9795199 /UG=Hs.272340 Human DNA sequence from clone RP11-209A2 on chromosome 6. Contains an RPL10 (60S ribosomal protein L10) pseudogene, ESTs, STSs and GSSs </td> <td> AL121934 </td> <td>  </td> <td> RP11-209A2.1 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -33.15 </td> <td> 645.38 </td> <td> -0.39 </td> <td> 0.71 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212331_at </td> <td> 212331_at </td> <td> X76061 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X76061.1 /DEF=H.sapiens p130 mRNA for 130K protein. /FEA=mRNA /GEN=p130 /PROD=130K protein /DB_XREF=gi:416030 /UG=Hs.79362 retinoblastoma-like 2 (p130) /FL=gb:NM_005611.1 </td> <td> X76061 </td> <td> retinoblastoma-like 2 </td> <td> RBL2 </td> <td> 5934 </td> <td> NM_005611 /// XM_005256083 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043550 // regulation of lipid kinase activity // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -10.98 </td> <td> 71.59 </td> <td> -0.39 </td> <td> 0.71 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201110_s_at </td> <td> 201110_s_at </td> <td> NM_003246 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003246.1 /DEF=Homo sapiens thrombospondin 1 (THBS1), mRNA. /FEA=mRNA /GEN=THBS1 /PROD=thrombospondin 1 /DB_XREF=gi:4507484 /UG=Hs.87409 thrombospondin 1 /FL=gb:NM_003246.1 </td> <td> NM_003246 </td> <td> thrombospondin 1 </td> <td> THBS1 </td> <td> 7057 </td> <td> NM_003246 </td> <td> 0000187 // activation of MAPK activity // inferred from mutant phenotype /// 0001666 // response to hypoxia // non-traceable author statement /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001953 // negative regulation of cell-matrix adhesion // inferred from direct assay /// 0002040 // sprouting angiogenesis // inferred from mutant phenotype /// 0002544 // chronic inflammatory response // inferred from expression pattern /// 0002576 // platelet degranulation // traceable author statement /// 0002581 // negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from direct assay /// 0002605 // negative regulation of dendritic cell antigen processing and presentation // inferred from direct assay /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from expression pattern /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007155 // cell adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from direct assay /// 0010748 // negative regulation of plasma membrane long-chain fatty acid transport // inferred from direct assay /// 0010751 // negative regulation of nitric oxide mediated signal transduction // inferred from direct assay /// 0010754 // negative regulation of cGMP-mediated signaling // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from direct assay /// 0010759 // positive regulation of macrophage chemotaxis // inferred from sequence or structural similarity /// 0010763 // positive regulation of fibroblast migration // inferred from direct assay /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0018149 // peptide cross-linking // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from direct assay /// 0032570 // response to progesterone // traceable author statement /// 0032695 // negative regulation of interleukin-12 production // inferred from direct assay /// 0032914 // positive regulation of transforming growth factor beta1 production // inferred from sequence or structural similarity /// 0033574 // response to testosterone // inferred from electronic annotation /// 0034605 // cellular response to heat // non-traceable author statement /// 0034976 // response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from expression pattern /// 0042535 // positive regulation of tumor necrosis factor biosynthetic process // inferred from direct assay /// 0043032 // positive regulation of macrophage activation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043652 // engulfment of apoptotic cell // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0048266 // behavioral response to pain // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050921 // positive regulation of chemotaxis // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0051895 // negative regulation of focal adhesion assembly // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling // inferred from direct assay /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071636 // positive regulation of transforming growth factor beta production // inferred from electronic annotation /// 1900119 // positive regulation of execution phase of apoptosis // inferred from direct assay /// 1902043 // positive regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from direct assay /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005577 // fibrinogen complex // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from sequence or structural similarity /// 0030141 // secretory granule // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // traceable author statement /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001786 // phosphatidylserine binding // inferred from direct assay /// 0001948 // glycoprotein binding // non-traceable author statement /// 0001968 // fibronectin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from mutant phenotype /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0030169 // low-density lipoprotein particle binding // inferred from direct assay /// 0042802 // identical protein binding // non-traceable author statement /// 0043236 // laminin binding // inferred from direct assay /// 0043394 // proteoglycan binding // traceable author statement /// 0050431 // transforming growth factor beta binding // inferred from sequence or structural similarity /// 0050431 // transforming growth factor beta binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation /// 0070051 // fibrinogen binding // inferred from direct assay /// 0070052 // collagen V binding // inferred from direct assay </td> <td> 43.65 </td> <td> 1276.78 </td> <td> 0.39 </td> <td> 0.71 </td> <td> 0.76 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200040_at </td> <td> 200040_at </td> <td> NM_006559 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006559.1 /DEF=Homo sapiens GAP-associated tyrosine phosphoprotein p62 (Sam68) (SAM68), mRNA.  /FEA=mRNA /GEN=SAM68 /PROD=GAP-associated tyrosine phosphoprotein p62(Sam68) /DB_XREF=gi:5730026 /UG=Hs.119537 GAP-associated tyrosine phosphoprotein p62 (Sam68) /FL=gb:BC000717.1 gb:M88108.1 gb:NM_006559.1 </td> <td> NM_006559 </td> <td> KH domain containing, RNA binding, signal transduction associated 1 </td> <td> KHDRBS1 </td> <td> 10657 </td> <td> NM_001271878 /// NM_006559 /// NR_073498 /// NR_073499 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0008283 // cell proliferation // traceable author statement /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from physical interaction /// 0031647 // regulation of protein stability // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045948 // positive regulation of translational initiation // inferred from direct assay /// 0046831 // regulation of RNA export from nucleus // inferred from sequence or structural similarity /// 0046833 // positive regulation of RNA export from nucleus // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070618 // Grb2-Sos complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0005070 // SH3/SH2 adaptor activity // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) binding // inferred from direct assay /// 0008266 // poly(U) RNA binding // inferred from direct assay /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 18.25 </td> <td> 765.60 </td> <td> 0.39 </td> <td> 0.71 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211935_at </td> <td> 211935_at </td> <td> D31885 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:D31885.1 /DEF=Human mRNA for KIAA0069 gene, partial cds. /FEA=mRNA /GEN=KIAA0069 /DB_XREF=gi:505097 /UG=Hs.75249 ADP-ribosylation factor-like 6 interacting protein </td> <td> D31885 </td> <td> ADP-ribosylation factor-like 6 interacting protein 1 </td> <td> ARL6IP1 </td> <td> 23204 </td> <td> NM_015161 </td> <td> 0006613 // cotranslational protein targeting to membrane // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005784 // Sec61 translocon complex // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 22.98 </td> <td> 552.36 </td> <td> 0.39 </td> <td> 0.71 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202306_at </td> <td> 202306_at </td> <td> NM_002696 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002696.1 /DEF=Homo sapiens polymerase (RNA) II (DNA directed) polypeptide G (POLR2G), mRNA.  /FEA=mRNA /GEN=POLR2G /PROD=polymerase (RNA) II (DNA directed) polypeptideG /DB_XREF=gi:4505946 /UG=Hs.14839 polymerase (RNA) II (DNA directed) polypeptide G /FL=gb:NM_002696.1 gb:U20659.1 </td> <td> NM_002696 </td> <td> polymerase (RNA) II (DNA directed) polypeptide G </td> <td> POLR2G </td> <td> 5436 </td> <td> NM_002696 </td> <td> 0000291 // nuclear-transcribed mRNA catabolic process, exonucleolytic // not recorded /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // not recorded /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0045948 // positive regulation of translational initiation // not recorded /// 0050434 // positive regulation of viral transcription // traceable author statement /// 0060213 // positive regulation of nuclear-transcribed mRNA poly(A) tail shortening // not recorded </td> <td> 0000932 // cytoplasmic mRNA processing body // not recorded /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0003697 // single-stranded DNA binding // not recorded /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // not recorded /// 0003899 // DNA-directed RNA polymerase activity // not recorded /// 0031369 // translation initiation factor binding // not recorded </td> <td> 17.48 </td> <td> 512.84 </td> <td> 0.39 </td> <td> 0.71 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201843_s_at </td> <td> 201843_s_at </td> <td> NM_004105 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004105.2 /DEF=Homo sapiens EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1), transcript variant 1, mRNA.  /FEA=mRNA /GEN=EFEMP1 /PROD=EGF-containing fibulin-like extracellular matrixprotein 1 precursor, isoform a precursor /DB_XREF=gi:9665261 /UG=Hs.76224 EGF-containing fibulin-like extracellular matrix protein 1 /FL=gb:U03877.1 gb:NM_004105.2 </td> <td> NM_004105 </td> <td> EGF containing fibulin-like extracellular matrix protein 1 </td> <td> EFEMP1 </td> <td> 2202 </td> <td> NM_001039348 /// NM_001039349 /// NM_004105 /// XM_005264205 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0007601 // visual perception // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030198 // extracellular matrix organization // traceable author statement /// 0032331 // negative regulation of chondrocyte differentiation // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005006 // epidermal growth factor-activated receptor activity // inferred from direct assay /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation </td> <td> -43.32 </td> <td> 2011.11 </td> <td> -0.38 </td> <td> 0.71 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211945_s_at </td> <td> 211945_s_at </td> <td> BG500301 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG500301 /FEA=EST /DB_XREF=gi:13461818 /DB_XREF=est:602546969F1 /CLONE=IMAGE:4669168 /UG=Hs.287797 Homo sapiens integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) (ITGB1), mRNA </td> <td> BG500301 </td> <td> integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) </td> <td> ITGB1 </td> <td> 3688 </td> <td> NM_002211 /// NM_033666 /// NM_033667 /// NM_033668 /// NM_033669 /// NM_133376 /// XM_005252448 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007161 // calcium-independent cell-matrix adhesion // inferred from genetic interaction /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0021943 // formation of radial glial scaffolds // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred by curator /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031345 // negative regulation of cell projection organization // inferred from electronic annotation /// 0031589 // cell-substrate adhesion // inferred from mutant phenotype /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032594 // protein transport within lipid bilayer // inferred from electronic annotation /// 0033631 // cell-cell adhesion mediated by integrin // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034698 // response to gonadotropin // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from genetic interaction /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071305 // cellular response to vitamin D // inferred from electronic annotation /// 0071479 // cellular response to ionizing radiation // inferred from electronic annotation /// 0071559 // response to transforming growth factor beta // inferred from electronic annotation /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0001726 // ruffle // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0008305 // integrin complex // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0014704 // intercalated disc // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0034667 // integrin alpha3-beta1 complex // inferred from electronic annotation /// 0034677 // integrin alpha7-beta1 complex // inferred from electronic annotation /// 0034678 // integrin alpha8-beta1 complex // traceable author statement /// 0034679 // integrin alpha9-beta1 complex // inferred from electronic annotation /// 0035748 // myelin sheath abaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0001968 // fibronectin binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0050839 // cell adhesion molecule binding // inferred from physical interaction /// 0051393 // alpha-actinin binding // inferred from electronic annotation </td> <td> -39.90 </td> <td> 1983.50 </td> <td> -0.38 </td> <td> 0.71 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 214119_s_at </td> <td> 214119_s_at </td> <td> AI936769 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI936769 /FEA=EST /DB_XREF=gi:5675639 /DB_XREF=est:wp69c11.x1 /CLONE=IMAGE:2467028 /UG=Hs.752 FK506-binding protein 1A (12kD) </td> <td> AI936769 </td> <td> FK506 binding protein 1A, 12kDa /// uncharacterized LOC101929368 </td> <td> FKBP1A /// LOC101929368 </td> <td> 2280 /// 101929368 </td> <td> NM_000801 /// NM_001199786 /// NM_054014 /// XR_245428 /// XR_247917 /// XR_253167 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0006457 // protein folding // non-traceable author statement /// 0006458 // 'de novo' protein folding // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0018208 // peptidyl-proline modification //  /// 0022417 // protein maturation by protein folding // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0032513 // negative regulation of protein phosphatase type 2B activity // inferred from direct assay /// 0032880 // regulation of protein localization // inferred from genetic interaction /// 0032925 // regulation of activin receptor signaling pathway // inferred from direct assay /// 0034205 // beta-amyloid formation // inferred from direct assay /// 0042026 // protein refolding // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043206 // extracellular fibril organization // inferred from direct assay /// 0050776 // regulation of immune response // inferred from mutant phenotype /// 0051280 // negative regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0060347 // heart trabecula formation // inferred from sequence or structural similarity /// 0061077 // chaperone-mediated protein folding // not recorded /// 0070588 // calcium ion transmembrane transport // non-traceable author statement /// 1902991 // regulation of amyloid precursor protein catabolic process // inferred from genetic interaction /// 1990000 // amyloid fibril formation // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0014802 // terminal cisterna // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0030018 // Z disc // inferred from direct assay /// 0030424 // axon //  /// 0033017 // sarcoplasmic reticulum membrane //  /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005024 // transforming growth factor beta-activated receptor activity // traceable author statement /// 0005160 // transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0005219 // ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005527 // macrolide binding // non-traceable author statement /// 0005528 // FK506 binding // inferred from direct assay /// 0005528 // FK506 binding // non-traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0019855 // calcium channel inhibitor activity // inferred from direct assay /// 0034713 // type I transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0044325 // ion channel binding // inferred from sequence or structural similarity /// 0046332 // SMAD binding // inferred from physical interaction /// 0048185 // activin binding // inferred from physical interaction </td> <td> -34.08 </td> <td> 1453.39 </td> <td> -0.38 </td> <td> 0.71 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 221734_at </td> <td> 221734_at </td> <td> BE328312 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE328312 /FEA=EST /DB_XREF=gi:9202173 /DB_XREF=est:hs95d12.x1 /CLONE=IMAGE:3144983 /UG=Hs.6614 ESTs, Weakly similar to A43932 mucin 2 precursor, intestinal H.sapiens </td> <td> BE328312 </td> <td> proline-rich coiled-coil 1 </td> <td> PRRC1 </td> <td> 133619 </td> <td> NM_001286808 /// NM_130809 /// XM_006714529 </td> <td>  </td> <td> 0005794 // Golgi apparatus // inferred from electronic annotation </td> <td>  </td> <td> -6.03 </td> <td> 162.31 </td> <td> -0.38 </td> <td> 0.71 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202303_x_at </td> <td> 202303_x_at </td> <td> NM_003601 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003601.1 /DEF=Homo sapiens SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (SMARCA5), mRNA.  /FEA=mRNA /GEN=SMARCA5 /PROD=SWISNF related, matrix associated, actindependent regulator of chromatin, subfamily a, member 5 /DB_XREF=gi:4507074 /UG=Hs.9456 SWISNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 /FL=gb:AB010882.1 gb:NM_003601.1 </td> <td> NM_003601 </td> <td> SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 </td> <td> SMARCA5 </td> <td> 8467 </td> <td> NM_003601 </td> <td> 0000183 // chromatin silencing at rDNA // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006333 // chromatin assembly or disassembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // inferred from direct assay /// 0006334 // nucleosome assembly // traceable author statement /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006352 // DNA-templated transcription, initiation // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016584 // nucleosome positioning // inferred from direct assay /// 0034080 // centromere-specific nucleosome assembly // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from electronic annotation </td> <td> 0000793 // condensed chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005677 // chromatin silencing complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016589 // NURF complex // inferred from direct assay /// 0031010 // ISWI-type complex // inferred from electronic annotation /// 0031213 // RSF complex // inferred from physical interaction /// 0043596 // nuclear replication fork // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0031491 // nucleosome binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay </td> <td> 5.53 </td> <td> 126.36 </td> <td> 0.38 </td> <td> 0.71 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201093_x_at </td> <td> 201093_x_at </td> <td> NM_004168 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004168.1 /DEF=Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=SDHA /PROD=succinate dehydrogenase complex, subunit A,flavoprotein precursor /DB_XREF=gi:4759079 /UG=Hs.469 succinate dehydrogenase complex, subunit A, flavoprotein (Fp) /FL=gb:BC001380.1 gb:L21936.1 gb:NM_004168.1 gb:D30648.1 </td> <td> NM_004168 </td> <td> succinate dehydrogenase complex, subunit A, flavoprotein (Fp) </td> <td> SDHA </td> <td> 6389 </td> <td> NM_001294332 /// NM_004168 /// XM_005248329 /// XM_005248331 </td> <td> 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006105 // succinate metabolic process // inferred from direct assay /// 0007399 // nervous system development // inferred from mutant phenotype /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // inferred from direct assay /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005749 // mitochondrial respiratory chain complex II // inferred from sequence or structural similarity /// 0005749 // mitochondrial respiratory chain complex II // traceable author statement /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0000104 // succinate dehydrogenase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008177 // succinate dehydrogenase (ubiquinone) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation </td> <td> 12.68 </td> <td> 199.96 </td> <td> 0.38 </td> <td> 0.71 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218220_at </td> <td> 218220_at </td> <td> NM_021640 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021640.1 /DEF=Homo sapiens MYG1 protein (MYG1), mRNA. /FEA=mRNA /GEN=MYG1 /PROD=MYG1 protein /DB_XREF=gi:11056017 /UG=Hs.15760 MYG1 protein /FL=gb:AF289485.1 gb:NM_021640.1 </td> <td> NM_021640 </td> <td> chromosome 12 open reading frame 10 </td> <td> C12orf10 </td> <td> 60314 </td> <td> NM_021640 </td> <td> 0035641 // locomotory exploration behavior // inferred from electronic annotation /// 0043473 // pigmentation // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> 6.38 </td> <td> 112.51 </td> <td> 0.38 </td> <td> 0.71 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 213846_at </td> <td> 213846_at </td> <td> AA382702 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA382702 /FEA=EST /DB_XREF=gi:2035020 /DB_XREF=est:EST95939 /UG=Hs.3462 cytochrome c oxidase subunit VIIc </td> <td> AA382702 </td> <td> cytochrome c oxidase subunit VIIc </td> <td> COX7C </td> <td> 1350 </td> <td> NM_001867 </td> <td> 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation </td> <td> -5.65 </td> <td> 182.30 </td> <td> -0.38 </td> <td> 0.71 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208095_s_at </td> <td> 208095_s_at </td> <td> NM_001222 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001222.1 /DEF=Homo sapiens calciumcalmodulin-dependent protein kinase (CaM kinase) II gamma (CAMK2G), mRNA.  /FEA=mRNA /GEN=CAMK2G /PROD=calciumcalmodulin-dependent protein kinase (CaMkinase) II gamma /DB_XREF=gi:4502554 /UG=Hs.250857 calciumcalmodulin-dependent protein kinase (CaM kinase) II gamma /FL=gb:U81554.1 gb:NM_001222.1 </td> <td> NM_001222 </td> <td> signal recognition particle 72kDa </td> <td> SRP72 </td> <td> 6731 </td> <td> NM_001267722 /// NM_006947 /// XM_005265765 </td> <td> 0006412 // translation // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005786 // signal recognition particle, endoplasmic reticulum targeting // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0048500 // signal recognition particle // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // non-traceable author statement /// 0005047 // signal recognition particle binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0008312 // 7S RNA binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -20.20 </td> <td> 431.52 </td> <td> -0.38 </td> <td> 0.71 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208865_at </td> <td> 208865_at </td> <td> BG534245 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG534245 /FEA=EST /DB_XREF=gi:13525785 /DB_XREF=est:602553366F1 /CLONE=IMAGE:4662880 /UG=Hs.144477 hypothetical protein PRO2975 /FL=gb:AF119911.1 </td> <td> BG534245 </td> <td> casein kinase 1, alpha 1 </td> <td> CSNK1A1 </td> <td> 1452 </td> <td> NM_001025105 /// NM_001271741 /// NM_001271742 /// NM_001892 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation </td> <td> -21.20 </td> <td> 725.95 </td> <td> -0.38 </td> <td> 0.71 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212129_at </td> <td> 212129_at </td> <td> AI589507 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI589507 /FEA=EST /DB_XREF=gi:4598555 /DB_XREF=est:tm57a05.x1 /CLONE=IMAGE:2162192 /UG=Hs.83724 hypothetical protein MGC5466 </td> <td> AI589507 </td> <td> non imprinted in Prader-Willi/Angelman syndrome 2 </td> <td> NIPA2 </td> <td> 81614 </td> <td> NM_001008860 /// NM_001008892 /// NM_001008894 /// NM_001184888 /// NM_001184889 /// NM_030922 /// XM_005272546 /// XM_005272547 /// XM_005272548 /// XM_005272549 /// XM_005272550 /// XM_005272552 /// XM_005272553 /// XM_006720364 /// XM_006720365 /// XM_006720366 /// XM_006720367 /// XM_006720368 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015693 // magnesium ion transport // inferred from electronic annotation </td> <td> 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0015095 // magnesium ion transmembrane transporter activity // inferred from electronic annotation </td> <td> 32.00 </td> <td> 478.38 </td> <td> 0.38 </td> <td> 0.72 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 221520_s_at </td> <td> 221520_s_at </td> <td> BC001651 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001651.1 /DEF=Homo sapiens, hypothetical protein FLJ10468, clone MGC:2726, mRNA, complete cds.  /FEA=mRNA /PROD=hypothetical protein FLJ10468 /DB_XREF=gi:12804484 /UG=Hs.48855 hypothetical protein FLJ10468 /FL=gb:BC000703.1 gb:BC001651.1 </td> <td> BC001651 </td> <td> cell division cycle associated 8 </td> <td> CDCA8 </td> <td> 55143 </td> <td> NM_001256875 /// NM_018101 </td> <td> 0000089 // mitotic metaphase // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005825 // half bridge of spindle pole body // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0010369 // chromocenter // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0032133 // chromosome passenger complex // inferred from physical interaction /// 0043234 // protein complex // inferred from direct assay /// 0045171 // intercellular bridge // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 7.85 </td> <td> 142.05 </td> <td> 0.38 </td> <td> 0.72 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200673_at </td> <td> 200673_at </td> <td> NM_014713 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014713.2 /DEF=Homo sapiens lysosomal-associated protein transmembrane 4 alpha (MBNT), mRNA.  /FEA=mRNA /GEN=MBNT /PROD=lysosomal-associated protein transmembrane 4alpha /DB_XREF=gi:13518239 /UG=Hs.111894 lysosomal-associated protein transmembrane 4 alpha /FL=gb:BC000421.1 gb:BC003158.1 gb:NM_014713.2 gb:D14696.1 </td> <td> NM_014713 </td> <td> lysosomal protein transmembrane 4 alpha </td> <td> LAPTM4A </td> <td> 9741 </td> <td> NM_014713 </td> <td> 0006810 // transport // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 46.60 </td> <td> 1157.75 </td> <td> 0.38 </td> <td> 0.72 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200084_at </td> <td> 200084_at </td> <td> BE748698 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE748698 /FEA=EST /DB_XREF=gi:10162690 /DB_XREF=est:601571740T1 /CLONE=IMAGE:3838712 /UG=Hs.78050 small acidic protein </td> <td> BE748698 </td> <td> chromosome 11 open reading frame 58 </td> <td> C11orf58 </td> <td> 10944 </td> <td> NM_001142705 /// NM_014267 </td> <td>  </td> <td>  </td> <td>  </td> <td> 18.13 </td> <td> 574.24 </td> <td> 0.38 </td> <td> 0.72 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201069_at </td> <td> 201069_at </td> <td> NM_004530 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004530.1 /DEF=Homo sapiens matrix metalloproteinase 2 (gelatinase A, 72kD gelatinase, 72kD type IV collagenase) (MMP2), mRNA.  /FEA=mRNA /GEN=MMP2 /PROD=matrix metalloproteinase 2 preproprotein /DB_XREF=gi:11342665 /UG=Hs.111301 matrix metalloproteinase 2 (gelatinase A, 72kD gelatinase, 72kD type IV collagenase) /FL=gb:NM_004530.1 gb:BC002576.1 </td> <td> NM_004530 </td> <td> matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) </td> <td> MMP2 </td> <td> 4313 </td> <td> NM_001127891 /// NM_004530 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001955 // blood vessel maturation // inferred from electronic annotation /// 0001957 // intramembranous ossification // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060346 // bone trabecula formation // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030017 // sarcomere // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation </td> <td> 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -23.20 </td> <td> 1598.17 </td> <td> -0.38 </td> <td> 0.72 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210949_s_at </td> <td> 210949_s_at </td> <td> BC000533 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000533.1 /DEF=Homo sapiens, Similar to eukaryotic translation initiation factor 3, subunit 8 (110kD), clone MGC:8693, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to eukaryotic translation initiationfactor 3, subunit 8 (110kD) /DB_XREF=gi:12653522 /UG=Hs.4835 eukaryotic translation initiation factor 3, subunit 8 (110kD) /FL=gb:BC000533.1 </td> <td> BC000533 </td> <td> eukaryotic translation initiation factor 3, subunit C /// eukaryotic translation initiation factor 3, subunit C-like </td> <td> EIF3C /// EIF3CL </td> <td> 8663 /// 728689 </td> <td> NM_001037808 /// NM_001099661 /// NM_001199142 /// NM_001267574 /// NM_001286478 /// NM_003752 /// XM_005255535 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from electronic annotation /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031369 // translation initiation factor binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -53.38 </td> <td> 1394.14 </td> <td> -0.37 </td> <td> 0.72 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203401_at </td> <td> 203401_at </td> <td> NM_002765 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002765.1 /DEF=Homo sapiens phosphoribosyl pyrophosphate synthetase 2 (PRPS2), mRNA.  /FEA=mRNA /GEN=PRPS2 /PROD=phosphoribosyl pyrophosphate synthetase 2 /DB_XREF=gi:4506128 /UG=Hs.2910 phosphoribosyl pyrophosphate synthetase 2 /FL=gb:NM_002765.1 </td> <td> NM_002765 </td> <td> phosphoribosyl pyrophosphate synthetase 2 </td> <td> PRPS2 </td> <td> 5634 </td> <td> NM_001039091 /// NM_002765 </td> <td> 0006015 // 5-phosphoribose 1-diphosphate biosynthetic process // inferred from electronic annotation /// 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006167 // AMP biosynthetic process // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0009156 // ribonucleoside monophosphate biosynthetic process // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019693 // ribose phosphate metabolic process // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0044249 // cellular biosynthetic process // inferred from electronic annotation </td> <td> 0002189 // ribose phosphate diphosphokinase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004749 // ribose phosphate diphosphokinase activity // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0016208 // AMP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0043531 // ADP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 5.12 </td> <td> 96.29 </td> <td> 0.37 </td> <td> 0.72 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203510_at </td> <td> 203510_at </td> <td> BG170541 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG170541 /FEA=EST /DB_XREF=gi:12677244 /DB_XREF=est:602322942F1 /CLONE=IMAGE:4425947 /UG=Hs.285754 met proto-oncogene (hepatocyte growth factor receptor) /FL=gb:J02958.1 gb:NM_000245.1 </td> <td> BG170541 </td> <td> MET proto-oncogene, receptor tyrosine kinase </td> <td> MET </td> <td> 4233 </td> <td> NM_000245 /// NM_001127500 /// XM_006715988 /// XM_006715989 /// XM_006715990 /// XM_006715991 </td> <td> 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010828 // positive regulation of glucose transport // inferred from electronic annotation /// 0014812 // muscle cell migration // inferred from electronic annotation /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // non-traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // traceable author statement /// 0030534 // adult behavior // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from mutant phenotype /// 0050918 // positive chemotaxis // inferred from direct assay /// 0051450 // myoblast proliferation // inferred from electronic annotation /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // inferred from direct assay /// 1901299 // negative regulation of hydrogen peroxide-mediated programmed cell death // inferred from mutant phenotype /// 2001028 // positive regulation of endothelial cell chemotaxis // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005008 // hepatocyte growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction </td> <td> -6.88 </td> <td> 108.64 </td> <td> -0.37 </td> <td> 0.72 </td> <td> 0.77 </td> <td> -4.62 </td> </tr>
  <tr> <td> 35147_at </td> <td> 35147_at </td> <td> AB002360 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AB002360:Human mRNA for KIAA0362 gene, partial cds /cds=(0,3327) /gb=AB002360 /gi=2224664 /ug=Hs.25515 /len=5391 </td> <td> AB002360 </td> <td> MCF.2 cell line derived transforming sequence-like </td> <td> MCF2L </td> <td> 23263 </td> <td> NM_001112732 /// NM_024979 /// XM_005268307 /// XM_005268308 /// XM_005268309 /// XM_005268310 /// XM_005268312 /// XM_005268313 /// XM_005268314 /// XM_005268315 /// XM_005268316 /// XM_006719966 /// XM_006719967 /// XM_006719968 /// XR_429282 </td> <td> 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from electronic annotation </td> <td> 4.88 </td> <td> 76.44 </td> <td> 0.37 </td> <td> 0.72 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208982_at </td> <td> 208982_at </td> <td> AW574504 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW574504 /FEA=EST /DB_XREF=gi:7246055 /DB_XREF=est:UI-HF-BK0-aab-h-05-0-UI.s1 /CLONE=IMAGE:3053409 /UG=Hs.78146 plateletendothelial cell adhesion molecule (CD31 antigen) /FL=gb:M37780.1 gb:M28526.1 gb:NM_000442.1 </td> <td> AW574504 </td> <td> platelet/endothelial cell adhesion molecule 1 </td> <td> PECAM1 </td> <td> 5175 </td> <td> NM_000442 /// XM_005276880 /// XM_005276881 /// XM_005276882 /// XM_005276883 /// XM_006721944 /// XM_006721945 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0006909 // phagocytosis // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008037 // cell recognition // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0050904 // diapedesis // inferred from direct assay /// 0072011 // glomerular endothelium development // inferred from expression pattern </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 67.88 </td> <td> 1707.74 </td> <td> 0.37 </td> <td> 0.72 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200760_s_at </td> <td> 200760_s_at </td> <td> N92494 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N92494 /FEA=EST /DB_XREF=gi:1264803 /DB_XREF=est:zb12h11.s1 /CLONE=IMAGE:301893 /UG=Hs.92384 vitamin A responsive; cytoskeleton related /FL=gb:BC005143.1 gb:AF070523.1 gb:AF125530.1 gb:AF161476.1 gb:NM_006407.2 </td> <td> N92494 </td> <td> ADP-ribosylation factor-like 6 interacting protein 5 </td> <td> ARL6IP5 </td> <td> 10550 </td> <td> NM_006407 </td> <td> 0008631 // intrinsic apoptotic signaling pathway in response to oxidative stress // inferred from direct assay /// 0010917 // negative regulation of mitochondrial membrane potential // inferred from mutant phenotype /// 0015813 // L-glutamate transport // inferred from sequence or structural similarity /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0051051 // negative regulation of transport // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation </td> <td> -13.62 </td> <td> 415.61 </td> <td> -0.37 </td> <td> 0.72 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202576_s_at </td> <td> 202576_s_at </td> <td> AL553254 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL553254 /FEA=EST /DB_XREF=gi:12892919 /DB_XREF=est:AL553254 /CLONE=CS0DI073YF07 (3 prime) /UG=Hs.226396 hypothetical protein FLJ11126 /FL=gb:BC005162.1 gb:NM_018332.1 </td> <td> AL553254 </td> <td> DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A /// DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B </td> <td> DDX19A /// DDX19B </td> <td> 11269 /// 55308 </td> <td> NM_001014449 /// NM_001014451 /// NM_001257172 /// NM_001257173 /// NM_001257174 /// NM_001257175 /// NM_007242 /// NM_018332 /// XM_005256030 /// XM_006721126 /// XM_006721127 </td> <td> 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 7.62 </td> <td> 137.74 </td> <td> 0.37 </td> <td> 0.72 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202042_at </td> <td> 202042_at </td> <td> NM_002109 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002109.2 /DEF=Homo sapiens histidyl-tRNA synthetase (HARS), mRNA. /FEA=mRNA /GEN=HARS /PROD=histidyl tRNA synthetase /DB_XREF=gi:6996013 /UG=Hs.77798 histidyl-tRNA synthetase /FL=gb:NM_002109.2 </td> <td> NM_002109 </td> <td> histidyl-tRNA synthetase /// uncharacterized LOC101928623 </td> <td> HARS /// LOC101928623 </td> <td> 3035 /// 101928623 </td> <td> NM_001258040 /// NM_001258041 /// NM_001258042 /// NM_001289092 /// NM_001289093 /// NM_001289094 /// NM_002109 /// XM_005268428 /// XR_242729 /// XR_242730 /// XR_247486 /// XR_252702 /// XR_252703 /// XR_424088 /// XR_424089 /// XR_424090 /// XR_428675 /// XR_432546 </td> <td> 0006412 // translation // non-traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006427 // histidyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004821 // histidine-tRNA ligase activity // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation </td> <td> -9.02 </td> <td> 240.04 </td> <td> -0.37 </td> <td> 0.72 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 32137_at </td> <td> 32137_at </td> <td> Y14330 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AF029778:Homo sapiens Jagged2 (JAG2) mRNA, complete cds /cds=(404,4120) /gb=AF029778 /gi=2605944 /ug=Hs.166154 /len=4974 </td> <td> Y14330 </td> <td> jagged 2 </td> <td> JAG2 </td> <td> 3714 </td> <td> NM_002226 /// NM_145159 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0007049 // cell cycle // non-traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007219 // Notch signaling pathway // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from expression pattern /// 0009912 // auditory receptor cell fate commitment // inferred from sequence or structural similarity /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from direct assay /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from direct assay /// 0030334 // regulation of cell migration // non-traceable author statement /// 0042127 // regulation of cell proliferation // inferred from direct assay /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042492 // gamma-delta T cell differentiation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045061 // thymic T cell selection // inferred from direct assay /// 1990134 // epithelial cell apoptotic process involved in palatal shelf morphogenesis // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005112 // Notch binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay </td> <td> 18.63 </td> <td> 607.24 </td> <td> 0.36 </td> <td> 0.73 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217044_s_at </td> <td> 217044_s_at </td> <td> BC004298 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BC004298.1 /DEF=Homo sapiens, clone IMAGE:3622874, mRNA, partial cds. /FEA=mRNA /PROD=Unknown (protein for IMAGE:3622874) /DB_XREF=gi:13279160 /UG=Hs.198037 KIAA0599 protein </td> <td> BC004298 </td> <td> pleckstrin homology domain containing, family G (with RhoGef domain) member 3 </td> <td> PLEKHG3 </td> <td> 26030 </td> <td> NM_015549 /// XM_005267511 /// XM_005267512 /// XM_005267513 /// XM_006720106 /// XM_006720107 /// XM_006720108 </td> <td> 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation </td> <td>  </td> <td> 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation </td> <td> 7.63 </td> <td> 51.09 </td> <td> 0.36 </td> <td> 0.73 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208981_at </td> <td> 208981_at </td> <td> AA702701 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA702701 /FEA=EST /DB_XREF=gi:2705814 /DB_XREF=est:zi90h02.s1 /CLONE=IMAGE:448083 /UG=Hs.78146 plateletendothelial cell adhesion molecule (CD31 antigen) /FL=gb:M37780.1 gb:M28526.1 gb:NM_000442.1 </td> <td> AA702701 </td> <td> platelet/endothelial cell adhesion molecule 1 </td> <td> PECAM1 </td> <td> 5175 </td> <td> NM_000442 /// XM_005276880 /// XM_005276881 /// XM_005276882 /// XM_005276883 /// XM_006721944 /// XM_006721945 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0006909 // phagocytosis // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008037 // cell recognition // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0050904 // diapedesis // inferred from direct assay /// 0072011 // glomerular endothelium development // inferred from expression pattern </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -24.97 </td> <td> 1234.64 </td> <td> -0.36 </td> <td> 0.73 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209263_x_at </td> <td> 209263_x_at </td> <td> BC000389 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000389.1 /DEF=Homo sapiens, transmembrane 4 superfamily member 7, clone MGC:8437, mRNA, complete cds.  /FEA=mRNA /PROD=transmembrane 4 superfamily member 7 /DB_XREF=gi:12653240 /UG=Hs.26518 transmembrane 4 superfamily member 7 /FL=gb:BC000389.1 gb:AF022813.1 gb:AF054841.1 gb:NM_003271.1 </td> <td> BC000389 </td> <td> tetraspanin 4 </td> <td> TSPAN4 </td> <td> 7106 </td> <td> NM_001025234 /// NM_001025235 /// NM_001025236 /// NM_001025237 /// NM_001025238 /// NM_001025239 /// NM_003271 /// XM_005253102 /// XM_005253104 /// XM_006718287 </td> <td> 0006461 // protein complex assembly // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay </td> <td> 0003823 // antigen binding // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 9.88 </td> <td> 137.16 </td> <td> 0.36 </td> <td> 0.73 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208870_x_at </td> <td> 208870_x_at </td> <td> BC000931 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000931.2 /DEF=Homo sapiens, ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, clone MGC:5380, mRNA, complete cds.  /FEA=mRNA /PROD=ATP synthase, H+ transporting, mitochondrial F1complex, gamma polypeptide 1 /DB_XREF=gi:13111822 /UG=Hs.155433 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 /FL=gb:BC000470.1 gb:BC000931.2 gb:D16562.1 </td> <td> BC000931 </td> <td> ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 </td> <td> ATP5C1 </td> <td> 509 </td> <td> NM_001001973 /// NM_005174 </td> <td> 0006119 // oxidative phosphorylation // non-traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // non-traceable author statement /// 0006754 // ATP biosynthetic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) // non-traceable author statement /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // non-traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // non-traceable author statement /// 0022857 // transmembrane transporter activity // inferred by curator /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation </td> <td> -27.60 </td> <td> 1176.28 </td> <td> -0.36 </td> <td> 0.73 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 207616_s_at </td> <td> 207616_s_at </td> <td> NM_004180 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004180.1 /DEF=Homo sapiens TRAF family member-associated NFKB activator (TANK), mRNA.  /FEA=mRNA /GEN=TANK /PROD=TRAF family member-associated NFKB activator /DB_XREF=gi:4759249 /UG=Hs.146847 TRAF family member-associated NFKB activator /FL=gb:U63830.1 gb:NM_004180.1 </td> <td> NM_004180 </td> <td> TRAF family member-associated NFKB activator </td> <td> TANK </td> <td> 10010 </td> <td> NM_001199135 /// NM_004180 /// NM_133484 /// XM_005246206 /// XM_005246207 /// XM_005246208 /// XM_005246210 /// XM_005246211 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -13.22 </td> <td> 516.79 </td> <td> -0.36 </td> <td> 0.73 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 204028_s_at </td> <td> 204028_s_at </td> <td> NM_012197 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012197.2 /DEF=Homo sapiens rab6 GTPase activating protein (GAP and centrosome-associated) (GAPCENA), mRNA.  /FEA=mRNA /GEN=GAPCENA /PROD=rab6 GTPase activating protein (GAP andcentrosome-associated) /DB_XREF=gi:12232372 /UG=Hs.55099 rab6 GTPase activating protein (GAP and centrosome-associated) /FL=gb:NM_012197.2 </td> <td> NM_012197 </td> <td> RAB GTPase activating protein 1 </td> <td> RABGAP1 </td> <td> 23637 </td> <td> NM_012197 /// XM_005251866 /// XM_005251868 /// XM_006717031 /// XM_006717032 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // traceable author statement /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015631 // tubulin binding // traceable author statement </td> <td> -10.72 </td> <td> 163.11 </td> <td> -0.36 </td> <td> 0.73 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200006_at </td> <td> 200006_at </td> <td> NM_007262 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007262.1 /DEF=Homo sapiens RNA-binding protein regulatory subunit (DJ-1), mRNA. /FEA=mRNA /GEN=DJ-1 /PROD=RNA-binding protein regulatory subunit /DB_XREF=gi:6005748 /UG=Hs.10958 RNA-binding protein regulatory subunit /FL=gb:AF021819.1 gb:NM_007262.1 gb:D61380.1 </td> <td> NM_007262 </td> <td> parkinson protein 7 </td> <td> PARK7 </td> <td> 11315 </td> <td> NM_001123377 /// NM_007262 /// XM_005263424 </td> <td> 0001933 // negative regulation of protein phosphorylation // inferred from genetic interaction /// 0001963 // synaptic transmission, dopaminergic // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from genetic interaction /// 0006508 // proteolysis // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from sequence or structural similarity /// 0007338 // single fertilization // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032091 // negative regulation of protein binding // inferred from genetic interaction /// 0032091 // negative regulation of protein binding // inferred from mutant phenotype /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0034614 // cellular response to reactive oxygen species // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042743 // hydrogen peroxide metabolic process // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0045560 // regulation of TRAIL receptor biosynthetic process // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046826 // negative regulation of protein export from nucleus // inferred from genetic interaction /// 0050727 // regulation of inflammatory response // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0051583 // dopamine uptake involved in synaptic transmission // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from mutant phenotype /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0060081 // membrane hyperpolarization // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from direct assay /// 0060765 // regulation of androgen receptor signaling pathway // inferred from direct assay /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0090073 // positive regulation of protein homodimerization activity // inferred from direct assay /// 1900182 // positive regulation of protein localization to nucleus // inferred from direct assay /// 1901215 // negative regulation of neuron death // inferred from direct assay /// 1901299 // negative regulation of hydrogen peroxide-mediated programmed cell death // inferred from direct assay /// 1901671 // positive regulation of superoxide dismutase activity // inferred from direct assay /// 1901984 // negative regulation of protein acetylation // inferred from direct assay /// 1903073 // negative regulation of death-inducing signaling complex assembly // inferred by curator /// 1903094 // negative regulation of protein K48-linked deubiquitination // inferred from direct assay /// 1903122 // negative regulation of TRAIL-activated apoptotic signaling pathway // inferred from mutant phenotype /// 2000157 // negative regulation of ubiquitin-specific protease activity // inferred from direct assay /// 2000277 // positive regulation of oxidative phosphorylation uncoupler activity // inferred from electronic annotation /// 2000825 // positive regulation of androgen receptor activity // inferred from mutant phenotype /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001268 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005829 // cytosol // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0004601 // peroxidase activity // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0016532 // superoxide dismutase copper chaperone activity // inferred from direct assay /// 0016684 // oxidoreductase activity, acting on peroxide as acceptor // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019955 // cytokine binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044388 // small protein activating enzyme binding // inferred from physical interaction /// 0044390 // small protein conjugating enzyme binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction /// 0051920 // peroxiredoxin activity // inferred from electronic annotation /// 0097110 // scaffold protein binding // inferred from physical interaction /// 1903135 // cupric ion binding // inferred from direct assay /// 1903136 // cuprous ion binding // inferred from direct assay /// 1990381 // ubiquitin-specific protease binding // inferred from physical interaction </td> <td> -28.55 </td> <td> 1246.12 </td> <td> -0.36 </td> <td> 0.73 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203633_at </td> <td> 203633_at </td> <td> BF001714 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF001714 /FEA=EST /DB_XREF=gi:10701989 /DB_XREF=est:7g92b09.x1 /CLONE=IMAGE:3313913 /UG=Hs.259785 carnitine palmitoyltransferase I, liver /FL=gb:NM_001876.1 gb:L39211.1 </td> <td> BF001714 </td> <td> carnitine palmitoyltransferase 1A (liver) </td> <td> CPT1A </td> <td> 1374 </td> <td> NM_001031847 /// NM_001876 /// XM_005273762 /// XM_005273763 </td> <td> 0001676 // long-chain fatty acid metabolic process // inferred from direct assay /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006853 // carnitine shuttle // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009437 // carnitine metabolic process // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0032000 // positive regulation of fatty acid beta-oxidation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046320 // regulation of fatty acid oxidation // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0071398 // cellular response to fatty acid // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0031307 // integral component of mitochondrial outer membrane // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0004095 // carnitine O-palmitoyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> 10.45 </td> <td> 176.07 </td> <td> 0.36 </td> <td> 0.73 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218604_at </td> <td> 218604_at </td> <td> NM_014319 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014319.2 /DEF=Homo sapiens integral inner nuclear membrane protein (MAN1), mRNA. /FEA=mRNA /GEN=MAN1 /PROD=integral inner nuclear membrane protein /DB_XREF=gi:7706606 /UG=Hs.7256 integral inner nuclear membrane protein /FL=gb:AF112299.2 gb:NM_014319.2 </td> <td> NM_014319 </td> <td> LEM domain containing 3 </td> <td> LEMD3 </td> <td> 23592 </td> <td> NM_001167614 /// NM_014319 </td> <td> 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0032926 // negative regulation of activin receptor signaling pathway // inferred from direct assay /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from direct assay /// 0005639 // integral component of nuclear inner membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 6.90 </td> <td> 119.55 </td> <td> 0.36 </td> <td> 0.73 </td> <td> 0.78 </td> <td> -4.62 </td> </tr>
  <tr> <td> 207549_x_at </td> <td> 207549_x_at </td> <td> NM_002389 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002389.1 /DEF=Homo sapiens membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen) (MCP), mRNA.  /FEA=mRNA /GEN=MCP /PROD=membrane cofactor protein (CD46,trophoblast-lymphocyte cross-reactive antigen) /DB_XREF=gi:11321566 /UG=Hs.83532 membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen) /FL=gb:NM_002389.1 </td> <td> NM_002389 </td> <td> CD46 molecule, complement regulatory protein </td> <td> CD46 </td> <td> 4179 </td> <td> NM_002389 /// NM_153826 /// NM_172350 /// NM_172351 /// NM_172352 /// NM_172353 /// NM_172354 /// NM_172355 /// NM_172356 /// NM_172357 /// NM_172358 /// NM_172359 /// NM_172360 /// NM_172361 </td> <td> 0002250 // adaptive immune response // inferred by curator /// 0002376 // immune system process // inferred from electronic annotation /// 0002456 // T cell mediated immunity // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation /// 0008593 // regulation of Notch signaling pathway // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0032613 // interleukin-10 production // inferred from direct assay /// 0032733 // positive regulation of interleukin-10 production // inferred from direct assay /// 0035581 // sequestering of extracellular ligand from receptor // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0043382 // positive regulation of memory T cell differentiation // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045591 // positive regulation of regulatory T cell differentiation // inferred from direct assay /// 0045916 // negative regulation of complement activation // inferred from electronic annotation /// 0071636 // positive regulation of transforming growth factor beta production // inferred from direct assay </td> <td> 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0002079 // inner acrosomal membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001848 // complement binding // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from physical interaction </td> <td> 13.93 </td> <td> 252.96 </td> <td> 0.35 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200091_s_at </td> <td> 200091_s_at </td> <td> AA888388 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA888388 /FEA=EST /DB_XREF=gi:3004063 /DB_XREF=est:nw79f03.s1 /CLONE=IMAGE:1252829 /UG=Hs.113029 ribosomal protein S25 </td> <td> AA888388 </td> <td> ribosomal protein S25 </td> <td> RPS25 </td> <td> 6230 </td> <td> NM_001028 </td> <td> 0000028 // ribosomal small subunit assembly // inferred from electronic annotation /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from direct assay /// 0005840 // ribosome // non-traceable author statement /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -49.67 </td> <td> 1268.41 </td> <td> -0.35 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203890_s_at </td> <td> 203890_s_at </td> <td> BF686824 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF686824 /FEA=EST /DB_XREF=gi:11972232 /DB_XREF=est:602140792F1 /CLONE=IMAGE:4301998 /UG=Hs.25619 death-associated protein kinase 3 /FL=gb:AB007144.1 gb:NM_001348.1 gb:AB022341.1 </td> <td> BF686824 </td> <td> death-associated protein kinase 3 /// microRNA 637 </td> <td> DAPK3 /// MIR637 </td> <td> 1613 /// 693222 </td> <td> NM_001348 /// NR_030367 /// XM_005259508 /// XM_005259509 </td> <td> 0000910 // cytokinesis // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006940 // regulation of smooth muscle contraction // traceable author statement /// 0007088 // regulation of mitosis // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0010506 // regulation of autophagy // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042981 // regulation of apoptotic process // not recorded /// 0042981 // regulation of apoptotic process // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // traceable author statement /// 0071346 // cellular response to interferon-gamma // inferred from direct assay /// 0090263 // positive regulation of canonical Wnt signaling pathway // inferred from mutant phenotype /// 0097190 // apoptotic signaling pathway // inferred from electronic annotation /// 2000145 // regulation of cell motility // traceable author statement /// 2000249 // regulation of actin cytoskeleton reorganization // traceable author statement /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004683 // calmodulin-dependent protein kinase activity // not recorded /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043522 // leucine zipper domain binding // inferred from physical interaction </td> <td> -8.32 </td> <td> 131.21 </td> <td> -0.35 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 213619_at </td> <td> 213619_at </td> <td> AV753392 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV753392 /FEA=EST /DB_XREF=gi:10911240 /DB_XREF=est:AV753392 /CLONE=NPDAUG03 /UG=Hs.245710 heterogeneous nuclear ribonucleoprotein H1 (H) </td> <td> AV753392 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -74.92 </td> <td> 1443.91 </td> <td> -0.35 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 219610_at </td> <td> 219610_at </td> <td> NM_022448 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022448.1 /DEF=Homo sapiens hypothetical protein FLJ21817 similar to Rhoip2 (FLJ21817), mRNA.  /FEA=mRNA /GEN=FLJ21817 /PROD=hypothetical protein FLJ21817 similar to Rhoip2 /DB_XREF=gi:11967978 /UG=Hs.33254 hypothetical protein FLJ21817 similar to Rhoip2 /FL=gb:NM_022448.1 </td> <td> NM_022448 </td> <td> Rho guanine nucleotide exchange factor (GEF) 28 </td> <td> ARHGEF28 </td> <td> 64283 </td> <td> NM_001080479 /// NM_001177693 /// NM_001244364 /// XM_005248568 /// XM_006714669 </td> <td> 0021955 // central nervous system neuron axonogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 6.72 </td> <td> 101.69 </td> <td> 0.35 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217768_at </td> <td> 217768_at </td> <td> NM_016039 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016039.1 /DEF=Homo sapiens CGI-99 protein (LOC51637), mRNA. /FEA=mRNA /GEN=LOC51637 /PROD=CGI-99 protein /DB_XREF=gi:7706321 /UG=Hs.110803 CGI-99 protein /FL=gb:BC001722.1 gb:AF151857.1 gb:AF100755.1 gb:NM_016039.1 </td> <td> NM_016039 </td> <td> chromosome 14 open reading frame 166 </td> <td> C14orf166 </td> <td> 51637 </td> <td> NM_016039 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0072669 // tRNA-splicing ligase complex // inferred from direct assay </td> <td> 0000993 // RNA polymerase II core binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 11.00 </td> <td> 1048.67 </td> <td> 0.35 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208248_x_at </td> <td> 208248_x_at </td> <td> NM_001642 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001642.1 /DEF=Homo sapiens amyloid beta (A4) precursor-like protein 2 (APLP2), mRNA.  /FEA=mRNA /GEN=APLP2 /PROD=amyloid beta (A4) precursor-like protein 2 /DB_XREF=gi:4502146 /UG=Hs.279518 amyloid beta (A4) precursor-like protein 2 /FL=gb:L09209.1 gb:NM_001642.1 gb:L27631.1 gb:AF168956.1 </td> <td> NM_001642 </td> <td> amyloid beta (A4) precursor-like protein 2 </td> <td> APLP2 </td> <td> 334 </td> <td> NM_001142276 /// NM_001142277 /// NM_001142278 /// NM_001243299 /// NM_001642 /// NR_024515 /// NR_024516 </td> <td> 0001967 // suckling behavior // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046914 // transition metal ion binding // inferred from electronic annotation </td> <td> -38.62 </td> <td> 1429.01 </td> <td> -0.35 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208684_at </td> <td> 208684_at </td> <td> U24105 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U24105.1 /DEF=Homo sapiens coatomer protein (COPA) mRNA, complete cds. /FEA=mRNA /GEN=COPA /PROD=coatomer protein /DB_XREF=gi:1638873 /UG=Hs.75887 coatomer protein complex, subunit alpha /FL=gb:U24105.1 gb:NM_004371.2 </td> <td> U24105 </td> <td> coatomer protein complex, subunit alpha </td> <td> COPA </td> <td> 1314 </td> <td> NM_001098398 /// NM_004371 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0009451 // RNA modification // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030157 // pancreatic juice secretion // inferred from direct assay /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from direct assay /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005179 // hormone activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -19.90 </td> <td> 618.08 </td> <td> -0.35 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200649_at </td> <td> 200649_at </td> <td> BC002356 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC002356.1 /DEF=Homo sapiens, nucleobindin 1, clone MGC:8479, mRNA, complete cds. /FEA=mRNA /PROD=nucleobindin 1 /DB_XREF=gi:12803104 /UG=Hs.172609 nucleobindin 1 /FL=gb:BC002356.1 gb:M96824.1 gb:NM_006184.1 </td> <td> BC002356 </td> <td> nucleobindin 1 </td> <td> NUCB1 </td> <td> 4924 </td> <td> NM_006184 </td> <td>  </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -9.60 </td> <td> 199.55 </td> <td> -0.35 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 221435_x_at </td> <td> 221435_x_at </td> <td> NM_031207 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031207.1 /DEF=Homo sapiens hypothetical protein HT036 (HT036), mRNA. /FEA=CDS /GEN=HT036 /PROD=hypothetical protein HT036 /DB_XREF=gi:13654271 /FL=gb:NM_031207.1 </td> <td> NM_031207 </td> <td> hydroxypyruvate isomerase (putative) </td> <td> HYI </td> <td> 81888 </td> <td> NM_001190880 /// NM_001243526 /// NM_031207 /// XM_005271239 /// XM_005271240 /// XM_006710937 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td>  </td> <td> 0008903 // hydroxypyruvate isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation </td> <td> -9.90 </td> <td> 181.45 </td> <td> -0.35 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202542_s_at </td> <td> 202542_s_at </td> <td> NM_004757 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004757.1 /DEF=Homo sapiens small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating) (SCYE1), mRNA.  /FEA=mRNA /GEN=SCYE1 /PROD=small inducible cytokine subfamily E, member 1 /DB_XREF=gi:4758265 /UG=Hs.146401 small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating) /FL=gb:NM_004757.1 gb:U10117.1 </td> <td> NM_004757 </td> <td> aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 </td> <td> AIMP1 </td> <td> 9255 </td> <td> NM_001142415 /// NM_001142416 /// NM_004757 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007267 // cell-cell signaling // inferred from direct assay /// 0009611 // response to wounding // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0050900 // leukocyte migration // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0017101 // aminoacyl-tRNA synthetase multienzyme complex // inferred from direct assay /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0000049 // tRNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay </td> <td> -8.42 </td> <td> 290.71 </td> <td> -0.35 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200818_at </td> <td> 200818_at </td> <td> NM_001697 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001697.1 /DEF=Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit (oligomycin sensitivity conferring protein) (ATP5O), mRNA.  /FEA=mRNA /GEN=ATP5O /PROD=ATP synthase, H+ transporting, mitochondrial F1complex, O subunit (oligomycin sensitivity conferringprotein) /DB_XREF=gi:4502302 /UG=Hs.76572 ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit (oligomycin sensitivity conferring protein) /FL=gb:NM_001697.1 </td> <td> NM_001697 </td> <td> ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit </td> <td> ATP5O </td> <td> 539 </td> <td> NM_001697 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // non-traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred from mutant phenotype /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005753 // mitochondrial proton-transporting ATP synthase complex // non-traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0008144 // drug binding // inferred from direct assay /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation </td> <td> 14.67 </td> <td> 851.01 </td> <td> 0.34 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201488_x_at </td> <td> 201488_x_at </td> <td> BC000717 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000717.1 /DEF=Homo sapiens, GAP-associated tyrosine phosphoprotein p62 (Sam68), clone MGC:1286, mRNA, complete cds.  /FEA=mRNA /PROD=GAP-associated tyrosine phosphoprotein p62(Sam68) /DB_XREF=gi:12653852 /UG=Hs.119537 GAP-associated tyrosine phosphoprotein p62 (Sam68) /FL=gb:BC000717.1 gb:M88108.1 gb:NM_006559.1 </td> <td> BC000717 </td> <td> KH domain containing, RNA binding, signal transduction associated 1 </td> <td> KHDRBS1 </td> <td> 10657 </td> <td> NM_001271878 /// NM_006559 /// NR_073498 /// NR_073499 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0008283 // cell proliferation // traceable author statement /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from physical interaction /// 0031647 // regulation of protein stability // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045948 // positive regulation of translational initiation // inferred from direct assay /// 0046831 // regulation of RNA export from nucleus // inferred from sequence or structural similarity /// 0046833 // positive regulation of RNA export from nucleus // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070618 // Grb2-Sos complex // inferred from electronic annotation </td> <td> 0003677 // DNA binding // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0005070 // SH3/SH2 adaptor activity // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) binding // inferred from direct assay /// 0008266 // poly(U) RNA binding // inferred from direct assay /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -14.60 </td> <td> 363.52 </td> <td> -0.34 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201112_s_at </td> <td> 201112_s_at </td> <td> NM_001316 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001316.1 /DEF=Homo sapiens chromosome segregation 1 (yeast homolog)-like (CSE1L), mRNA.  /FEA=mRNA /GEN=CSE1L /PROD=chromosome segregation 1 (yeast homolog)-like /DB_XREF=gi:4503072 /UG=Hs.90073 chromosome segregation 1 (yeast homolog)-like /FL=gb:U33286.1 gb:AF053641.1 gb:NM_001316.1 </td> <td> NM_001316 </td> <td> CSE1 chromosome segregation 1-like (yeast) </td> <td> CSE1L </td> <td> 1434 </td> <td> NM_001256135 /// NM_001316 /// NM_177436 /// NR_045796 </td> <td> 0006611 // protein export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008262 // importin-alpha export receptor activity // traceable author statement /// 0008536 // Ran GTPase binding // inferred from electronic annotation </td> <td> 16.45 </td> <td> 591.98 </td> <td> 0.34 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201506_at </td> <td> 201506_at </td> <td> NM_000358 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000358.1 /DEF=Homo sapiens transforming growth factor, beta-induced, 68kD (TGFBI), mRNA.  /FEA=mRNA /GEN=TGFBI /PROD=transforming growth factor, beta-induced, 68kD /DB_XREF=gi:4507466 /UG=Hs.118787 transforming growth factor, beta-induced, 68kD /FL=gb:BC000097.1 gb:BC004972.1 gb:M77349.1 gb:NM_000358.1 </td> <td> NM_000358 </td> <td> transforming growth factor, beta-induced, 68kDa </td> <td> TGFBI </td> <td> 7045 </td> <td> NM_000358 </td> <td> 0001525 // angiogenesis // inferred from expression pattern /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005178 // integrin binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from physical interaction /// 0050840 // extracellular matrix binding // inferred from electronic annotation </td> <td> -6.75 </td> <td> 178.93 </td> <td> -0.34 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 205003_at </td> <td> 205003_at </td> <td> NM_014705 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014705.1 /DEF=Homo sapiens KIAA0716 gene product (KIAA0716), mRNA. /FEA=mRNA /GEN=KIAA0716 /PROD=KIAA0716 gene product /DB_XREF=gi:7662263 /UG=Hs.118140 KIAA0716 gene product /FL=gb:AB018259.1 gb:NM_014705.1 </td> <td> NM_014705 </td> <td> dedicator of cytokinesis 4 </td> <td> DOCK4 </td> <td> 9732 </td> <td> NM_014705 /// XM_006716188 /// XM_006716189 </td> <td> 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0032420 // stereocilium // inferred from sequence or structural similarity /// 0032421 // stereocilium bundle // inferred from sequence or structural similarity </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0030675 // Rac GTPase activator activity // inferred from direct assay /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0048365 // Rac GTPase binding // inferred from direct assay </td> <td> 14.65 </td> <td> 558.23 </td> <td> 0.34 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212232_at </td> <td> 212232_at </td> <td> AB023231 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB023231.1 /DEF=Homo sapiens mRNA for KIAA1014 protein, partial cds. /FEA=mRNA /GEN=KIAA1014 /PROD=KIAA1014 protein /DB_XREF=gi:4589677 /UG=Hs.6834 KIAA1014 protein </td> <td> AB023231 </td> <td> formin binding protein 4 </td> <td> FNBP4 </td> <td> 23360 </td> <td> NM_015308 /// XM_005252833 /// XM_005252834 /// XM_006718171 /// XR_242785 /// XR_242786 /// XR_428841 </td> <td>  </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -8.62 </td> <td> 233.21 </td> <td> -0.34 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208666_s_at </td> <td> 208666_s_at </td> <td> BE866412 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE866412 /FEA=EST /DB_XREF=gi:10315097 /DB_XREF=est:601678647F1 /CLONE=IMAGE:3961522 /UG=Hs.119222 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70-interacting protein) /FL=gb:U17714.1 gb:AF116650.1 </td> <td> BE866412 </td> <td> suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) </td> <td> ST13 </td> <td> 6767 </td> <td> NM_001278589 /// NM_003932 </td> <td> 0006457 // protein folding // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0061084 // negative regulation of protein refolding // inferred from electronic annotation /// 0070389 // chaperone cofactor-dependent protein refolding // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // traceable author statement /// 0032403 // protein complex binding // inferred from electronic annotation /// 0032564 // dATP binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation </td> <td> 13.00 </td> <td> 245.50 </td> <td> 0.34 </td> <td> 0.74 </td> <td> 0.79 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202108_at </td> <td> 202108_at </td> <td> NM_000285 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000285.1 /DEF=Homo sapiens peptidase D (PEPD), mRNA. /FEA=mRNA /GEN=PEPD /PROD=Xaa-Pro dipeptidase /DB_XREF=gi:4557834 /UG=Hs.73947 peptidase D /FL=gb:BC004305.1 gb:J04605.1 gb:NM_000285.1 </td> <td> NM_000285 </td> <td> peptidase D </td> <td> PEPD </td> <td> 5184 </td> <td> NM_000285 /// NM_001166056 /// NM_001166057 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from electronic annotation </td> <td> 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016805 // dipeptidase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 5.10 </td> <td> 230.38 </td> <td> 0.34 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218728_s_at </td> <td> 218728_s_at </td> <td> NM_014184 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014184.1 /DEF=Homo sapiens HSPC163 protein (HSPC163), mRNA. /FEA=mRNA /GEN=HSPC163 /PROD=HSPC163 protein /DB_XREF=gi:7661823 /UG=Hs.108854 HSPC163 protein /FL=gb:BC000573.1 gb:AF161512.1 gb:NM_014184.1 </td> <td> NM_014184 </td> <td> cornichon family AMPA receptor auxiliary protein 4 </td> <td> CNIH4 </td> <td> 29097 </td> <td> NM_001277197 /// NM_001277198 /// NM_001277199 /// NM_001277200 /// NM_014184 /// NR_102347 /// XM_006711768 </td> <td> 0035556 // intracellular signal transduction // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -8.95 </td> <td> 247.93 </td> <td> -0.33 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 216804_s_at </td> <td> 216804_s_at </td> <td> AK027217 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK027217.1 /DEF=Homo sapiens cDNA: FLJ23564 fis, clone LNG10773. /FEA=mRNA /DB_XREF=gi:10440296 /UG=Hs.306913 Homo sapiens cDNA: FLJ23564 fis, clone LNG10773 </td> <td> AK027217 </td> <td> PDZ and LIM domain 5 </td> <td> PDLIM5 </td> <td> 10611 </td> <td> NM_001011513 /// NM_001011515 /// NM_001011516 /// NM_001256425 /// NM_001256426 /// NM_001256427 /// NM_001256428 /// NM_001256429 /// NM_006457 /// NR_046186 /// XM_005262693 /// XM_005262695 /// XM_005262696 /// XM_005262698 /// XM_006714066 /// XM_006714067 /// XM_006714068 /// XM_006714069 /// XM_006714070 </td> <td> 0051963 // regulation of synapse assembly // inferred from sequence or structural similarity /// 0061001 // regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042805 // actinin binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation </td> <td> 11.95 </td> <td> 329.38 </td> <td> 0.33 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217919_s_at </td> <td> 217919_s_at </td> <td> BE782148 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE782148 /FEA=EST /DB_XREF=gi:10203346 /DB_XREF=est:601467749F1 /CLONE=IMAGE:3870636 /UG=Hs.112110 PTD007 protein /FL=gb:AL136659.1 gb:AF078860.1 gb:AF151038.1 gb:NM_014050.1 </td> <td> BE782148 </td> <td> mitochondrial ribosomal protein L42 </td> <td> MRPL42 </td> <td> 28977 </td> <td> NM_014050 /// NM_172177 /// NM_172178 /// NR_038159 /// NR_038160 /// NR_038161 </td> <td> 0006412 // translation // non-traceable author statement </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005763 // mitochondrial small ribosomal subunit // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -10.02 </td> <td> 270.21 </td> <td> -0.33 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 221481_x_at </td> <td> 221481_x_at </td> <td> D55672 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D55672.1 /DEF=Human mRNA for heterogeneous nuclear ribonucleoprotein D (hnRNP D), complete cds, clone cDx7.  /FEA=mRNA /PROD=heterogeneous nuclear ribonucleoprotein D (hnRNPD) /DB_XREF=gi:870744 /UG=Hs.303627 heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA-binding protein 1, 37kD) /FL=gb:D55672.1 </td> <td> D55672 </td> <td> heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) </td> <td> HNRNPD </td> <td> 3184 </td> <td> NM_001003810 /// NM_002138 /// NM_031369 /// NM_031370 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006401 // RNA catabolic process // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0042752 // regulation of circadian rhythm // inferred from mutant phenotype /// 0043488 // regulation of mRNA stability // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0097167 // circadian regulation of translation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042162 // telomeric DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -13.75 </td> <td> 865.85 </td> <td> -0.33 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 179_at </td> <td> 179_at </td> <td> U38980 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> U38980 /FEATURE= /DEFINITION=U38980 Human PMS2 related (hPMSR6) mRNA,  complete cds </td> <td> U38980 </td> <td> DTX2P1-UPK3BP1-PMS2P11 readthrough transcribed pseudogene </td> <td> DTX2P1-UPK3BP1-PMS2P11 </td> <td> 441263 </td> <td> NR_023383 </td> <td> 0006298 // mismatch repair // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation </td> <td> 0032300 // mismatch repair complex // inferred from electronic annotation </td> <td> 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> 8.67 </td> <td> 265.81 </td> <td> 0.33 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200885_at </td> <td> 200885_at </td> <td> NM_005167 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005167.1 /DEF=Homo sapiens ras homolog gene family, member C (ARHC), mRNA. /FEA=mRNA /GEN=ARHC /PROD=ras homolog gene family, member C /DB_XREF=gi:4885066 /UG=Hs.179735 ras homolog gene family, member C /FL=gb:L25081.1 gb:NM_005167.1 </td> <td> NM_005167 </td> <td> ras homolog family member C </td> <td> RHOC </td> <td> 389 </td> <td> NM_001042678 /// NM_001042679 /// NM_175744 </td> <td> 0000910 // cytokinesis // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043297 // apical junction assembly // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 28.27 </td> <td> 1179.59 </td> <td> 0.33 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203151_at </td> <td> 203151_at </td> <td> AW296788 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW296788 /FEA=EST /DB_XREF=gi:6703424 /DB_XREF=est:UI-H-BW0-ajb-d-08-0-UI.s1 /CLONE=IMAGE:2731071 /UG=Hs.194301 microtubule-associated protein 1A /FL=gb:U38292.1 gb:NM_002373.1 gb:U14577.1 </td> <td> AW296788 </td> <td> microtubule-associated protein 1A </td> <td> MAP1A </td> <td> 4130 </td> <td> NM_002373 /// XM_005254385 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement </td> <td> 0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 5.00 </td> <td> 84.38 </td> <td> 0.33 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201577_at </td> <td> 201577_at </td> <td> NM_000269 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000269.1 /DEF=Homo sapiens non-metastatic cells 1, protein (NM23A) expressed in (NME1), mRNA.  /FEA=mRNA /GEN=NME1 /PROD=non-metastatic cells 1 protein /DB_XREF=gi:4557796 /UG=Hs.118638 non-metastatic cells 1, protein (NM23A) expressed in /FL=gb:BC000293.1 gb:NM_000269.1 </td> <td> NM_000269 </td> <td> NME/NM23 nucleoside diphosphate kinase 1 </td> <td> NME1 </td> <td> 4830 </td> <td> NM_000269 /// NM_198175 </td> <td> 0002762 // negative regulation of myeloid leukocyte differentiation // inferred from electronic annotation /// 0006165 // nucleoside diphosphate phosphorylation // inferred from electronic annotation /// 0006183 // GTP biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from electronic annotation /// 0006308 // DNA catabolic process // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from direct assay /// 0007399 // nervous system development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0009142 // nucleoside triphosphate biosynthetic process // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014075 // response to amine // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0033574 // response to testosterone // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045618 // positive regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0045682 // regulation of epidermis development // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071398 // cellular response to fatty acid // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from direct assay /// 0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0071944 // cell periphery // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004536 // deoxyribonuclease activity // inferred from direct assay /// 0004550 // nucleoside diphosphate kinase activity // inferred from direct assay /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019215 // intermediate filament binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from electronic annotation /// 0043024 // ribosomal small subunit binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 23.50 </td> <td> 861.15 </td> <td> 0.33 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217978_s_at </td> <td> 217978_s_at </td> <td> NM_017582 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017582.1 /DEF=Homo sapiens NICE-5 protein (HSA243666), mRNA. /FEA=mRNA /GEN=HSA243666 /PROD=NICE-5 protein /DB_XREF=gi:8923743 /UG=Hs.284233 NICE-5 protein /FL=gb:AF116721.1 gb:NM_017582.1 </td> <td> NM_017582 </td> <td> ubiquitin-conjugating enzyme E2Q family member 1 </td> <td> UBE2Q1 </td> <td> 55585 </td> <td> NM_017582 /// XM_005245315 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation </td> <td>  </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> -10.30 </td> <td> 295.70 </td> <td> -0.33 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 204528_s_at </td> <td> 204528_s_at </td> <td> NM_004537 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004537.1 /DEF=Homo sapiens nucleosome assembly protein 1-like 1 (NAP1L1), mRNA. /FEA=mRNA /GEN=NAP1L1 /PROD=nucleosome assembly protein 1-like 1 /DB_XREF=gi:4758755 /UG=Hs.179662 nucleosome assembly protein 1-like 1 /FL=gb:M86667.1 gb:NM_004537.1 </td> <td> NM_004537 </td> <td> nucleosome assembly protein 1-like 1 </td> <td> NAP1L1 </td> <td> 4673 </td> <td> NM_004537 /// NM_139207 /// XM_005268895 /// XM_005268896 /// XM_006719422 /// XM_006719423 /// XM_006719424 /// XM_006719425 /// XR_245930 /// XR_245931 /// XR_245932 </td> <td> 0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 10.62 </td> <td> 446.94 </td> <td> 0.33 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 213178_s_at </td> <td> 213178_s_at </td> <td> AB028989 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB028989.1 /DEF=Homo sapiens mRNA for KIAA1066 protein, partial cds. /FEA=mRNA /GEN=KIAA1066 /PROD=KIAA1066 protein /DB_XREF=gi:5689468 /UG=Hs.88500 mitogen-activated protein kinase 8 interacting protein 3 </td> <td> AB028989 </td> <td> mitogen-activated protein kinase 8 interacting protein 3 </td> <td> MAPK8IP3 </td> <td> 23162 </td> <td> NM_001040439 /// NM_015133 /// XM_005255187 /// XM_005255188 /// XM_005255190 /// XM_006720868 /// XM_006720869 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from sequence or structural similarity /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0060425 // lung morphogenesis // inferred from electronic annotation </td> <td> 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005790 // smooth endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030673 // axolemma // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation </td> <td> 0005078 // MAP-kinase scaffold activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from electronic annotation /// 0008432 // JUN kinase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0031434 // mitogen-activated protein kinase kinase binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation </td> <td> -4.13 </td> <td> 98.46 </td> <td> -0.33 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201104_x_at </td> <td> 201104_x_at </td> <td> NM_015383 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015383.1 /DEF=Homo sapiens hypothetical protein (DJ328E19.C1.1), mRNA. /FEA=mRNA /GEN=DJ328E19.C1.1 /PROD=hypothetical protein /DB_XREF=gi:7657016 /UG=Hs.218329 hypothetical protein /FL=gb:NM_015383.1 </td> <td> NM_015383 </td> <td> neuroblastoma breakpoint family, member 10 /// neuroblastoma breakpoint family, member 11 /// neuroblastoma breakpoint family, member 14 /// neuroblastoma breakpoint family, member 15 /// neuroblastoma breakpoint family, member 19 /// neuroblastoma breakpoint family, member 20 /// neuroblastoma breakpoint family, member 25, pseudogene /// neuroblastoma breakpoint family, member 26 /// neuroblastoma breakpoint family, member 8 /// neuroblastoma breakpoint family, member 9 </td> <td> NBPF10 /// NBPF11 /// NBPF14 /// NBPF15 /// NBPF19 /// NBPF20 /// NBPF25P /// NBPF26 /// NBPF8 /// NBPF9 </td> <td> 25832 /// 200030 /// 284565 /// 400818 /// 728841 /// 100132406 /// 100288142 /// 101060226 /// 101060684 /// 101929780 </td> <td> NM_001037501 /// NM_001037675 /// NM_001039703 /// NM_001101663 /// NM_001102663 /// NM_001170755 /// NM_001277444 /// NM_001278267 /// NM_015383 /// NM_173638 /// NM_183372 /// NR_046188 /// NR_102404 /// NR_102405 /// NR_104217 /// NR_110864 /// XM_003960069 /// XM_003960230 /// XM_005245096 /// XM_005245097 /// XM_005276139 /// XM_005276140 /// XM_005276167 /// XM_005276168 /// XM_005276169 /// XM_005276170 /// XM_005276171 /// XM_005276172 /// XM_005276173 /// XM_005276174 /// XM_005276175 /// XM_005276176 /// XM_005276177 /// XM_005276178 /// XM_005276179 /// XM_005276180 /// XM_005276181 /// XM_005276182 /// XM_005276183 /// XM_005276184 /// XM_005276185 /// XM_005276186 /// XM_005276187 /// XM_005277469 /// XM_005277470 /// XM_005277471 /// XM_005277472 /// XM_005277473 /// XM_005277474 /// XM_005277475 /// XM_005277476 /// XM_005277477 /// XM_005277478 /// XM_005277479 /// XM_005277480 /// XM_005277481 /// XM_005277482 /// XM_005277483 /// XM_005277484 /// XM_005277485 /// XM_005277486 /// XM_005277487 /// XM_005277488 /// XM_005277503 /// XM_005277504 /// XM_005277505 /// XM_006710872 /// XM_006711091 /// XM_006711092 /// XM_006711093 /// XM_006711094 /// XM_006711095 /// XM_006711096 /// XM_006711103 /// XM_006711104 /// XM_006711197 /// XM_006711265 /// XM_006711317 /// XM_006711707 /// XM_006711708 /// XM_006711709 /// XM_006711710 /// XM_006711711 /// XM_006711712 /// XM_006726340 /// XM_006726341 /// XM_006726342 /// XM_006726343 /// XM_006726344 /// XM_006726345 /// XM_006726360 /// XM_006726361 /// XM_006726362 /// XM_006726363 /// XM_006726364 /// XM_006726365 /// XR_426769 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 28.75 </td> <td> 518.07 </td> <td> 0.32 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200824_at </td> <td> 200824_at </td> <td> NM_000852 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000852.2 /DEF=Homo sapiens glutathione S-transferase pi (GSTP1), mRNA. /FEA=mRNA /GEN=GSTP1 /PROD=glutathione transferase /DB_XREF=gi:6552334 /UG=Hs.226795 glutathione S-transferase pi /FL=gb:U62589.1 gb:U30897.1 gb:NM_000852.2 </td> <td> NM_000852 </td> <td> glutathione S-transferase pi 1 </td> <td> GSTP1 </td> <td> 2950 </td> <td> NM_000852 </td> <td> 0000302 // response to reactive oxygen species // inferred from sequence or structural similarity /// 0002674 // negative regulation of acute inflammatory response // non-traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006749 // glutathione metabolic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009890 // negative regulation of biosynthetic process // inferred from direct assay /// 0010804 // negative regulation of tumor necrosis factor-mediated signaling pathway // inferred by curator /// 0032691 // negative regulation of interleukin-1 beta production // inferred from direct assay /// 0032720 // negative regulation of tumor necrosis factor production // inferred from direct assay /// 0032872 // regulation of stress-activated MAPK cascade // inferred from sequence or structural similarity /// 0032873 // negative regulation of stress-activated MAPK cascade // inferred from sequence or structural similarity /// 0032930 // positive regulation of superoxide anion generation // inferred from sequence or structural similarity /// 0035726 // common myeloid progenitor cell proliferation // inferred from sequence or structural similarity /// 0035732 // nitric oxide storage // non-traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB signaling // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // non-traceable author statement /// 0043508 // negative regulation of JUN kinase activity // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0048147 // negative regulation of fibroblast proliferation // inferred from sequence or structural similarity /// 0051771 // negative regulation of nitric-oxide synthase biosynthetic process // inferred from direct assay /// 0060547 // negative regulation of necrotic cell death // inferred from sequence or structural similarity /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070664 // negative regulation of leukocyte proliferation // inferred from sequence or structural similarity /// 0071222 // cellular response to lipopolysaccharide // inferred from sequence or structural similarity /// 0071638 // negative regulation of monocyte chemotactic protein-1 production // inferred from direct assay /// 1901687 // glutathione derivative biosynthetic process // traceable author statement /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097057 // TRAF2-GSTP1 complex // inferred from direct assay </td> <td> 0004364 // glutathione transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008432 // JUN kinase binding // inferred from sequence or structural similarity /// 0016740 // transferase activity // inferred from electronic annotation /// 0019207 // kinase regulator activity // inferred from sequence or structural similarity /// 0035730 // S-nitrosoglutathione binding // inferred from direct assay /// 0035731 // dinitrosyl-iron complex binding // inferred from direct assay /// 0070026 // nitric oxide binding // non-traceable author statement </td> <td> 13.02 </td> <td> 840.64 </td> <td> 0.32 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200709_at </td> <td> 200709_at </td> <td> NM_000801 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000801.1 /DEF=Homo sapiens FK506-binding protein 1A (12kD) (FKBP1A), mRNA. /FEA=mRNA /GEN=FKBP1A /PROD=FK506-binding protein 1A (12kD) /DB_XREF=gi:4503724 /UG=Hs.752 FK506-binding protein 1A (12kD) /FL=gb:BC001925.1 gb:M34539.1 gb:NM_000801.1 </td> <td> NM_000801 </td> <td> FK506 binding protein 1A, 12kDa /// uncharacterized LOC101929368 </td> <td> FKBP1A /// LOC101929368 </td> <td> 2280 /// 101929368 </td> <td> NM_000801 /// NM_001199786 /// NM_054014 /// XR_245428 /// XR_247917 /// XR_253167 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0006457 // protein folding // non-traceable author statement /// 0006458 // 'de novo' protein folding // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0018208 // peptidyl-proline modification //  /// 0022417 // protein maturation by protein folding // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0032513 // negative regulation of protein phosphatase type 2B activity // inferred from direct assay /// 0032880 // regulation of protein localization // inferred from genetic interaction /// 0032925 // regulation of activin receptor signaling pathway // inferred from direct assay /// 0034205 // beta-amyloid formation // inferred from direct assay /// 0042026 // protein refolding // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043206 // extracellular fibril organization // inferred from direct assay /// 0050776 // regulation of immune response // inferred from mutant phenotype /// 0051280 // negative regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0060347 // heart trabecula formation // inferred from sequence or structural similarity /// 0061077 // chaperone-mediated protein folding // not recorded /// 0070588 // calcium ion transmembrane transport // non-traceable author statement /// 1902991 // regulation of amyloid precursor protein catabolic process // inferred from genetic interaction /// 1990000 // amyloid fibril formation // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0014802 // terminal cisterna // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0030018 // Z disc // inferred from direct assay /// 0030424 // axon //  /// 0033017 // sarcoplasmic reticulum membrane //  /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005024 // transforming growth factor beta-activated receptor activity // traceable author statement /// 0005160 // transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0005219 // ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005527 // macrolide binding // non-traceable author statement /// 0005528 // FK506 binding // inferred from direct assay /// 0005528 // FK506 binding // non-traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0019855 // calcium channel inhibitor activity // inferred from direct assay /// 0034713 // type I transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0044325 // ion channel binding // inferred from sequence or structural similarity /// 0046332 // SMAD binding // inferred from physical interaction /// 0048185 // activin binding // inferred from physical interaction </td> <td> 23.30 </td> <td> 2490.30 </td> <td> 0.32 </td> <td> 0.75 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 207186_s_at </td> <td> 207186_s_at </td> <td> NM_004459 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004459.2 /DEF=Homo sapiens fetal Alzheimer antigen (FALZ), mRNA. /FEA=mRNA /GEN=FALZ /PROD=fetal Alzheimer antigen /DB_XREF=gi:6552329 /UG=Hs.99872 fetal Alzheimer antigen /FL=gb:U05237.1 gb:NM_004459.2 </td> <td> NM_004459 </td> <td> bromodomain PHD finger transcription factor </td> <td> BPTF </td> <td> 2186 </td> <td> NM_004459 /// NM_182641 /// XM_005257150 /// XM_005257151 /// XM_005257152 /// XM_005257153 /// XM_005257154 /// XM_005257155 /// XM_005257156 /// XM_005257157 /// XM_005257158 /// XM_005257159 /// XM_005257160 /// XM_005257161 /// XM_005257162 /// XM_006721770 /// XM_006721771 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007420 // brain development // inferred from mutant phenotype /// 0007492 // endoderm development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016589 // NURF complex // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008134 // transcription factor binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 8.00 </td> <td> 151.65 </td> <td> 0.32 </td> <td> 0.76 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201267_s_at </td> <td> 201267_s_at </td> <td> AL545523 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL545523 /FEA=EST /DB_XREF=gi:12878005 /DB_XREF=est:AL545523 /CLONE=CS0DI015YE19 (5 prime) /UG=Hs.250758 proteasome (prosome, macropain) 26S subunit, ATPase, 3 /FL=gb:M34079.1 gb:NM_002804.1 </td> <td> AL545523 </td> <td> proteasome (prosome, macropain) 26S subunit, ATPase, 3 </td> <td> PSMC3 </td> <td> 5702 </td> <td> NM_002804 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001824 // blastocyst development // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 2001141 // regulation of RNA biosynthetic process // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0009378 // four-way junction helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation </td> <td> 10.03 </td> <td> 246.49 </td> <td> 0.32 </td> <td> 0.76 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 215906_at </td> <td> 215906_at </td> <td> S65921 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:S65921.1 /DEF=anti-colorectal carcinoma light chain=glycoprotein CANAG-50 specific IgG1 kappa human, 19.9 hybridoma, antibody 1116NS19.9, mRNA, 998 nt.  /FEA=mRNA /GEN=anti-colorectal carcinoma light chain /PROD=anti-colorectal carcinoma light chain /DB_XREF=gi:425519 /UG=Hs.103996 Anti-colorectal carcinoma light chain </td> <td> S65921 </td> <td> immunoglobulin kappa chain complex </td> <td> Igk </td> <td> 243469 </td> <td>  </td> <td> 0030183 // B cell differentiation // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0042493 // response to drug // inferred from direct assay </td> <td>  </td> <td> 0003823 // antigen binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 4.78 </td> <td> 37.69 </td> <td> 0.32 </td> <td> 0.76 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201898_s_at </td> <td> 201898_s_at </td> <td> AI126625 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI126625 /FEA=EST /DB_XREF=gi:3595139 /DB_XREF=est:qd83a12.x1 /CLONE=IMAGE:1736062 /UG=Hs.80612 ubiquitin-conjugating enzyme E2A (RAD6 homolog) /FL=gb:M74524.1 gb:NM_003336.1 </td> <td> AI126625 </td> <td> ubiquitin-conjugating enzyme E2A </td> <td> UBE2A </td> <td> 7319 </td> <td> NM_001282161 /// NM_003336 /// NM_181762 /// NM_181777 </td> <td> 0000209 // protein polyubiquitination // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006281 // DNA repair // inferred from genetic interaction /// 0006301 // postreplication repair // non-traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0009411 // response to UV // inferred from genetic interaction /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0033522 // histone H2A ubiquitination // inferred from direct assay /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay </td> <td> 0000785 // chromatin // inferred from sequence or structural similarity /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0001741 // XY body // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0033503 // HULC complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction </td> <td> 9.55 </td> <td> 332.20 </td> <td> 0.32 </td> <td> 0.76 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218597_s_at </td> <td> 218597_s_at </td> <td> NM_018464 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018464.1 /DEF=Homo sapiens uncharacterized hematopoietic stemprogenitor cells protein MDS029 (MDS029), mRNA.  /FEA=mRNA /GEN=MDS029 /PROD=uncharacterized hematopoietic stemprogenitorcells protein MDS029 /DB_XREF=gi:8923929 /UG=Hs.43549 uncharacterized hematopoietic stemprogenitor cells protein MDS029 /FL=gb:AF220049.1 gb:NM_018464.1 </td> <td> NM_018464 </td> <td> CDGSH iron sulfur domain 1 </td> <td> CISD1 </td> <td> 55847 </td> <td> NM_018464 /// XM_006717916 </td> <td> 0043457 // regulation of cellular respiration // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation </td> <td> 8.10 </td> <td> 367.90 </td> <td> 0.32 </td> <td> 0.76 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 216532_x_at </td> <td> 216532_x_at </td> <td> AL138831 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL138831 /DEF=Human DNA sequence from clone RP3-406P24 on chromosome 6 Contains a thioredoxin-like pseudogene, 2 CpG islands, ESTs, STSs and GSSs /FEA=CDS /DB_XREF=gi:9863510 /UG=Hs.302081 Human DNA sequence from clone RP3-406P24 on chromosome 6 Contains a thioredoxin-like pseudogene, 2 CpG islands, ESTs, STSs and GSSs </td> <td> AL138831 </td> <td>  </td> <td> RP3-406P24.1 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -6.83 </td> <td> 146.26 </td> <td> -0.32 </td> <td> 0.76 </td> <td> 0.80 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212721_at </td> <td> 212721_at </td> <td> AI810380 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI810380 /FEA=EST /DB_XREF=gi:5396946 /DB_XREF=est:wb87h10.x1 /CLONE=IMAGE:2312707 /UG=Hs.47274 Homo sapiens mRNA; cDNA DKFZp564B176 (from clone DKFZp564B176) </td> <td> AI810380 </td> <td> splicing regulatory glutamine/lysine-rich protein 1 </td> <td> SREK1 </td> <td> 140890 </td> <td> NM_001077199 /// NM_001270492 /// NM_001270493 /// NM_139168 /// XM_005248439 /// XM_005248440 /// XM_005248441 /// XM_005248442 /// XM_006714535 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -5.62 </td> <td> 219.51 </td> <td> -0.32 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201746_at </td> <td> 201746_at </td> <td> NM_000546 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000546.2 /DEF=Homo sapiens tumor protein p53 (Li-Fraumeni syndrome) (TP53), mRNA. /FEA=mRNA /GEN=TP53 /PROD=tumor protein p53 /DB_XREF=gi:8400737 /UG=Hs.1846 tumor protein p53 (Li-Fraumeni syndrome) /FL=gb:AF307851.1 gb:BC003596.1 gb:M14694.1 gb:M14695.1 gb:NM_000546.2 </td> <td> NM_000546 </td> <td> tumor protein p53 </td> <td> TP53 </td> <td> 7157 </td> <td> NM_000546 /// NM_001126112 /// NM_001126113 /// NM_001126114 /// NM_001126115 /// NM_001126116 /// NM_001126117 /// NM_001126118 /// NM_001276695 /// NM_001276696 /// NM_001276697 /// NM_001276698 /// NM_001276699 /// NM_001276760 /// NM_001276761 </td> <td> 0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000733 // DNA strand renaturation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0002931 // response to ischemia // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from mutant phenotype /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from direct assay /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from mutant phenotype /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0006983 // ER overload response // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0007275 // multicellular organismal development // inferred from mutant phenotype /// 0007369 // gastrulation // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007569 // cell aging // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from direct assay /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008340 // determination of adult lifespan // inferred from sequence or structural similarity /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0009651 // response to salt stress // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010165 // response to X-ray // not recorded /// 0010332 // response to gamma radiation // inferred from mutant phenotype /// 0010666 // positive regulation of cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0012501 // programmed cell death // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // not recorded /// 0031497 // chromatin assembly // inferred from direct assay /// 0031571 // mitotic G1 DNA damage checkpoint // inferred from mutant phenotype /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0034103 // regulation of tissue remodeling // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034644 // cellular response to UV // not recorded /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // not recorded /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046677 // response to antibiotic // inferred from expression pattern /// 0046902 // regulation of mitochondrial membrane permeability // traceable author statement /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0051097 // negative regulation of helicase activity // traceable author statement /// 0051262 // protein tetramerization // traceable author statement /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0070243 // regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from sequence or structural similarity /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 0071850 // mitotic cell cycle arrest // inferred from electronic annotation /// 0072332 // intrinsic apoptotic signaling pathway by p53 class mediator // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0090343 // positive regulation of cell aging // inferred from electronic annotation /// 0090399 // replicative senescence // inferred from mutant phenotype /// 0090403 // oxidative stress-induced premature senescence // inferred from mutant phenotype /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 0097252 // oligodendrocyte apoptotic process // inferred from direct assay /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement /// 1901525 // negative regulation of macromitophagy // inferred from electronic annotation /// 1902108 // regulation of mitochondrial membrane permeability involved in apoptotic process // inferred from electronic annotation /// 2000378 // negative regulation of reactive oxygen species metabolic process // inferred from electronic annotation /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0000785 // chromatin // not recorded /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // not recorded /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016604 // nuclear body // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001228 // RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0002020 // protease binding // inferred from physical interaction /// 0002039 // p53 binding // not recorded /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003682 // chromatin binding // inferred from direct assay /// 0003684 // damaged DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005507 // copper ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035033 // histone deacetylase regulator activity // inferred from electronic annotation /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from physical interaction /// 0097371 // MDM2/MDM4 family protein binding // inferred from electronic annotation </td> <td> -6.10 </td> <td> 282.98 </td> <td> -0.32 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217884_at </td> <td> 217884_at </td> <td> NM_024662 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024662.1 /DEF=Homo sapiens hypothetical protein FLJ10774; KIAA1709 protein (FLJ10774), mRNA.  /FEA=mRNA /GEN=FLJ10774 /PROD=hypothetical protein FLJ12179 /DB_XREF=gi:13399321 /UG=Hs.71472 hypothetical protein FLJ10774; KIAA1709 protein /FL=gb:AL136882.1 gb:NM_024662.1 </td> <td> NM_024662 </td> <td> N-acetyltransferase 10 (GCN5-related) </td> <td> NAT10 </td> <td> 55226 </td> <td> NM_001144030 /// NM_024662 /// XM_005252999 </td> <td> 0008152 // metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 6.42 </td> <td> 170.39 </td> <td> 0.32 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212041_at </td> <td> 212041_at </td> <td> AL566172 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL566172 /FEA=EST /DB_XREF=gi:12918279 /DB_XREF=est:AL566172 /CLONE=CS0DF022YE19 (3 prime) /UG=Hs.106876 ATPase, H+ transporting, lysosomal (vacuolar proton pump), member D </td> <td> AL566172 </td> <td> ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 </td> <td> ATP6V0D1 </td> <td> 9114 </td> <td> NM_004691 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // non-traceable author statement /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0033572 // transferrin transport // traceable author statement /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from direct assay /// 0016471 // vacuolar proton-transporting V-type ATPase complex // non-traceable author statement /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation </td> <td> 16.03 </td> <td> 454.44 </td> <td> 0.32 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 220199_s_at </td> <td> 220199_s_at </td> <td> NM_022831 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022831.1 /DEF=Homo sapiens hypothetical protein FLJ12806 (FLJ12806), mRNA. /FEA=mRNA /GEN=FLJ12806 /PROD=hypothetical protein FLJ12806 /DB_XREF=gi:12383075 /UG=Hs.107637 hypothetical protein FLJ12806 /FL=gb:NM_022831.1 </td> <td> NM_022831 </td> <td> axin interactor, dorsalization associated </td> <td> AIDA </td> <td> 64853 </td> <td> NM_022831 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from sequence or structural similarity /// 0043496 // regulation of protein homodimerization activity // inferred from sequence or structural similarity /// 0043508 // negative regulation of JUN kinase activity // inferred from direct assay /// 0046329 // negative regulation of JNK cascade // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> -13.30 </td> <td> 218.22 </td> <td> -0.32 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 204975_at </td> <td> 204975_at </td> <td> NM_001424 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001424.1 /DEF=Homo sapiens epithelial membrane protein 2 (EMP2), mRNA. /FEA=mRNA /GEN=EMP2 /PROD=epithelial membrane protein 2 /DB_XREF=gi:4503560 /UG=Hs.29191 epithelial membrane protein 2 /FL=gb:U52100.1 gb:NM_001424.1 </td> <td> NM_001424 </td> <td> epithelial membrane protein 2 </td> <td> EMP2 </td> <td> 2013 </td> <td> NM_001424 /// XM_006720864 </td> <td> 0001954 // positive regulation of cell-matrix adhesion // inferred from direct assay /// 0008283 // cell proliferation // traceable author statement /// 2001046 // positive regulation of integrin-mediated signaling pathway // inferred from direct assay </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation </td> <td> 0005178 // integrin binding // inferred from physical interaction </td> <td> 3.92 </td> <td> 67.26 </td> <td> 0.32 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203142_s_at </td> <td> 203142_s_at </td> <td> NM_003664 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003664.1 /DEF=Homo sapiens adaptor-related protein complex 3, beta 1 subunit (AP3B1), mRNA.  /FEA=mRNA /GEN=AP3B1 /PROD=adaptor-related protein complex 3, beta 1subunit /DB_XREF=gi:4501974 /UG=Hs.155172 adaptor-related protein complex 3, beta 1 subunit /FL=gb:U91931.1 gb:U81504.1 gb:NM_003664.1 </td> <td> NM_003664 </td> <td> adaptor-related protein complex 3, beta 1 subunit </td> <td> AP3B1 </td> <td> 8546 </td> <td> NM_001271769 /// NM_003664 /// XM_005248618 /// XM_005248619 </td> <td> 0006622 // protein targeting to lysosome // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0008089 // anterograde axon cargo transport // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032438 // melanosome organization // inferred from mutant phenotype /// 0048007 // antigen processing and presentation, exogenous lipid antigen via MHC class Ib // inferred from electronic annotation /// 0048490 // anterograde synaptic vesicle transport // inferred from sequence or structural similarity /// 0051138 // positive regulation of NK T cell differentiation // inferred from electronic annotation </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030123 // AP-3 adaptor complex // inferred from electronic annotation /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0030742 // GTP-dependent protein binding // inferred from physical interaction </td> <td> -8.37 </td> <td> 255.16 </td> <td> -0.32 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203529_at </td> <td> 203529_at </td> <td> NM_016294 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016294.1 /DEF=Homo sapiens serinethreonine protein phosphatase catalytic subunit (LOC51723), mRNA.  /FEA=mRNA /GEN=LOC51723 /PROD=serinethreonine protein phosphatase catalyticsubunit /DB_XREF=gi:7706488 /UG=Hs.80324 serinethreonine protein phosphatase catalytic subunit /FL=gb:AF035158.2 gb:NM_016294.1 </td> <td> NM_016294 </td> <td> protein phosphatase 6, catalytic subunit </td> <td> PPP6C </td> <td> 5537 </td> <td> NM_001123355 /// NM_001123369 /// NM_002721 /// XM_006717175 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -7.17 </td> <td> 318.59 </td> <td> -0.31 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 219249_s_at </td> <td> 219249_s_at </td> <td> NM_021939 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021939.1 /DEF=Homo sapiens hypothetical protein FLJ22041 similar to FK506 binding proteins (FLJ22041), mRNA.  /FEA=mRNA /GEN=FLJ22041 /PROD=hypothetical protein FLJ22041 similar to FK506binding proteins /DB_XREF=gi:11345475 /UG=Hs.3849 hypothetical protein FLJ22041 similar to FK506 binding proteins /FL=gb:NM_021939.1 gb:AB045981.1 </td> <td> NM_021939 </td> <td> FK506 binding protein 10, 65 kDa </td> <td> FKBP10 </td> <td> 60681 </td> <td> NM_021939 /// XM_006722008 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0006457 // protein folding // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // not recorded </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // not recorded </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -7.28 </td> <td> 78.61 </td> <td> -0.31 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 221882_s_at </td> <td> 221882_s_at </td> <td> AI636233 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI636233 /FEA=EST /DB_XREF=gi:4687563 /DB_XREF=est:tz93b07.x1 /CLONE=IMAGE:2296117 /UG=Hs.288940 five-span transmembrane protein M83 </td> <td> AI636233 </td> <td> transmembrane protein 8A </td> <td> TMEM8A </td> <td> 58986 </td> <td> NM_021259 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 9.38 </td> <td> 210.54 </td> <td> 0.31 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209036_s_at </td> <td> 209036_s_at </td> <td> BC001917 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001917.1 /DEF=Homo sapiens, malate dehydrogenase 2, NAD (mitochondrial), clone MGC:3559, mRNA, complete cds.  /FEA=mRNA /PROD=malate dehydrogenase 2, NAD (mitochondrial) /DB_XREF=gi:12804928 /UG=Hs.111076 malate dehydrogenase 2, NAD (mitochondrial) /FL=gb:BC001917.1 gb:AF047470.1 gb:NM_005918.1 </td> <td> BC001917 </td> <td> malate dehydrogenase 2, NAD (mitochondrial) </td> <td> MDH2 </td> <td> 4191 </td> <td> NM_001282403 /// NM_001282404 /// NM_005918 /// NR_104165 </td> <td> 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0006108 // malate metabolic process // inferred from direct assay /// 0006108 // malate metabolic process // inferred from mutant phenotype /// 0006475 // internal protein amino acid acetylation // inferred from direct assay /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // traceable author statement /// 0044262 // cellular carbohydrate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016615 // malate dehydrogenase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0030060 // L-malate dehydrogenase activity // not recorded /// 0030060 // L-malate dehydrogenase activity // inferred from direct assay /// 0030060 // L-malate dehydrogenase activity // inferred from mutant phenotype /// 0043621 // protein self-association // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046554 // malate dehydrogenase (NADP+) activity // inferred from electronic annotation </td> <td> -13.42 </td> <td> 556.21 </td> <td> -0.31 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201140_s_at </td> <td> 201140_s_at </td> <td> NM_004583 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004583.1 /DEF=Homo sapiens RAB5C, member RAS oncogene family (RAB5C), mRNA. /FEA=mRNA /GEN=RAB5C /PROD=RAB5C, member RAS oncogene family /DB_XREF=gi:4759019 /UG=Hs.479 RAB5C, member RAS oncogene family /FL=gb:NM_004583.1 gb:U11293.1 gb:U18420.1 gb:AF141304.1 </td> <td> NM_004583 </td> <td> RAB5C, member RAS oncogene family </td> <td> RAB5C </td> <td> 5878 </td> <td> NM_001252039 /// NM_004583 /// NM_201434 </td> <td> 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007032 // endosome organization // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay </td> <td> 18.43 </td> <td> 352.89 </td> <td> 0.31 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209549_s_at </td> <td> 209549_s_at </td> <td> BC001121 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001121.1 /DEF=Homo sapiens, Similar to deoxyguanosine kinase, clone MGC:2111, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to deoxyguanosine kinase /DB_XREF=gi:12654572 /UG=Hs.326494 Homo sapiens, Similar to deoxyguanosine kinase, clone MGC:2111, mRNA, complete cds /FL=gb:BC001121.1 </td> <td> BC001121 </td> <td> deoxyguanosine kinase </td> <td> DGUOK </td> <td> 1716 </td> <td> NM_001929 /// NM_080915 /// NM_080916 /// NM_080917 /// NM_080918 /// XM_005264173 /// XM_005264174 /// XR_244926 </td> <td> 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008617 // guanosine metabolic process // traceable author statement /// 0009157 // deoxyribonucleoside monophosphate biosynthetic process // inferred from direct assay /// 0009157 // deoxyribonucleoside monophosphate biosynthetic process // inferred from electronic annotation /// 0009157 // deoxyribonucleoside monophosphate biosynthetic process // traceable author statement /// 0009165 // nucleotide biosynthetic process // not recorded /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043101 // purine-containing compound salvage // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046070 // dGTP metabolic process // inferred from electronic annotation /// 0046122 // purine deoxyribonucleoside metabolic process // inferred from direct assay /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004138 // deoxyguanosine kinase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0019206 // nucleoside kinase activity // not recorded </td> <td> 8.95 </td> <td> 315.70 </td> <td> 0.31 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 213654_at </td> <td> 213654_at </td> <td> R60550 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:R60550 /FEA=EST /DB_XREF=gi:831245 /DB_XREF=est:yh14b04.s1 /CLONE=IMAGE:37736 /UG=Hs.26782 PCAF associated factor 65 beta /FL=gb:AF069736.1 gb:NM_014409.1 </td> <td> R60550 </td> <td> TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa </td> <td> TAF5L </td> <td> 27097 </td> <td> NM_001025247 /// NM_014409 /// XM_005273099 /// XM_005273100 /// XM_005273101 </td> <td> 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0043966 // histone H3 acetylation // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0030914 // STAGA complex // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation </td> <td> -12.30 </td> <td> 167.03 </td> <td> -0.31 </td> <td> 0.76 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 215823_x_at </td> <td> 215823_x_at </td> <td> U64661 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U64661 /DEF=Human poly(A)-binding protein processed pseudogene3 /FEA=mRNA /DB_XREF=gi:1519214 /UG=Hs.283767 poly(A)-binding protein, cytoplasmic, pseudogene 3 </td> <td> U64661 </td> <td> poly(A) binding protein, cytoplasmic 1 /// ring finger protein, LIM domain interacting </td> <td> PABPC1 /// RLIM </td> <td> 26986 /// 51132 </td> <td> NM_002568 /// NM_016120 /// NM_183353 /// XM_005250861 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006378 // mRNA polyadenylation // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0031047 // gene silencing by RNA // inferred from sequence or structural similarity /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045727 // positive regulation of translation // traceable author statement /// 0045892 // negative regulation of transcription, DNA-templated // non-traceable author statement /// 0048255 // mRNA stabilization // traceable author statement /// 0060213 // positive regulation of nuclear-transcribed mRNA poly(A) tail shortening // inferred from sequence or structural similarity /// 0060816 // random inactivation of X chromosome // inferred from direct assay /// 1900153 // positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // inferred from sequence or structural similarity /// 2000623 // negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0017053 // transcriptional repressor complex // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008143 // poly(A) binding // inferred from direct assay /// 0008143 // poly(A) binding // traceable author statement /// 0008266 // poly(U) RNA binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008494 // translation activator activity // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 44.22 </td> <td> 1512.11 </td> <td> 0.31 </td> <td> 0.77 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 214953_s_at </td> <td> 214953_s_at </td> <td> X06989 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:X06989.1 /DEF=Human mRNA for amyloid A4(751) protein. /FEA=mRNA /DB_XREF=gi:28720 /UG=Hs.177486 amyloid beta (A4) precursor protein (protease nexin-II, Alzheimer disease) </td> <td> X06989 </td> <td> amyloid beta (A4) precursor protein </td> <td> APP </td> <td> 351 </td> <td> NM_000484 /// NM_001136016 /// NM_001136129 /// NM_001136130 /// NM_001136131 /// NM_001204301 /// NM_001204302 /// NM_001204303 /// NM_201413 /// NM_201414 </td> <td> 0000085 // mitotic G2 phase // inferred from sequence or structural similarity /// 0001967 // suckling behavior // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006378 // mRNA polyadenylation // inferred from sequence or structural similarity /// 0006417 // regulation of translation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006508 // proteolysis // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0007617 // mating behavior // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0008088 // axon cargo transport // inferred from sequence or structural similarity /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0010971 // positive regulation of G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0016199 // axon midline choice point recognition // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0016358 // dendrite development // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // traceable author statement /// 0030900 // forebrain development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from sequence or structural similarity /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040014 // regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048669 // collateral sprouting in absence of injury // inferred from sequence or structural similarity /// 0050803 // regulation of synapse structure and activity // inferred from sequence or structural similarity /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051124 // synaptic growth at neuromuscular junction // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from mutant phenotype /// 0051563 // smooth endoplasmic reticulum calcium ion homeostasis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005641 // nuclear envelope lumen // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from sequence or structural similarity /// 0030424 // axon // inferred from sequence or structural similarity /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from direct assay /// 0043198 // dendritic shaft // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0051233 // spindle midzone // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from sequence or structural similarity /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0033130 // acetylcholine receptor binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation /// 0051425 // PTB domain binding // inferred from physical interaction /// 0070851 // growth factor receptor binding // inferred from electronic annotation </td> <td> -148.15 </td> <td> 1335.55 </td> <td> -0.31 </td> <td> 0.77 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 216242_x_at </td> <td> 216242_x_at </td> <td> AW402635 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW402635 /FEA=EST /DB_XREF=gi:6921341 /DB_XREF=est:UI-HF-BK0-aav-a-09-0-UI.r1 /CLONE=IMAGE:3055001 /UG=Hs.80475 polymerase (RNA) II (DNA directed) polypeptide J (13.3kD) </td> <td> AW402635 </td> <td> polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa /// polymerase (RNA) II (DNA directed) polypeptide J2 /// polymerase (RNA) II (DNA directed) polypeptide J3 /// polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene /// uroplakin 3B-like </td> <td> POLR2J /// POLR2J2 /// POLR2J3 /// POLR2J4 /// UPK3BL </td> <td> 5439 /// 84820 /// 246721 /// 548644 /// 100134938 </td> <td> NM_001015884 /// NM_001097615 /// NM_001114403 /// NM_006234 /// NM_032734 /// NM_032958 /// NM_032959 /// NM_145325 /// NR_003655 /// XM_005250452 /// XM_006716032 /// XM_006716033 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0001055 // RNA polymerase II activity // not recorded /// 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030275 // LRR domain binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation </td> <td> 7.52 </td> <td> 175.94 </td> <td> 0.31 </td> <td> 0.77 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202082_s_at </td> <td> 202082_s_at </td> <td> AV748469 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV748469 /FEA=EST /DB_XREF=gi:10906317 /DB_XREF=est:AV748469 /CLONE=NPCAXA07 /UG=Hs.75232 SEC14 (S. cerevisiae)-like 1 /FL=gb:D67029.1 gb:NM_003003.1 </td> <td> AV748469 </td> <td> SEC14-like 1 (S. cerevisiae) </td> <td> SEC14L1 </td> <td> 6397 </td> <td> NM_001039573 /// NM_001143998 /// NM_001143999 /// NM_001144001 /// NM_001204408 /// NM_001204410 /// NM_003003 </td> <td> 0006810 // transport // inferred from electronic annotation </td> <td> 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> 13.25 </td> <td> 479.20 </td> <td> 0.31 </td> <td> 0.77 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202243_s_at </td> <td> 202243_s_at </td> <td> NM_002796 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002796.1 /DEF=Homo sapiens proteasome (prosome, macropain) subunit, beta type, 4 (PSMB4), mRNA.  /FEA=mRNA /GEN=PSMB4 /PROD=proteasome (prosome, macropain) subunit, betatype, 4 /DB_XREF=gi:4506198 /UG=Hs.89545 proteasome (prosome, macropain) subunit, beta type, 4 /FL=gb:BC000331.1 gb:NM_002796.1 gb:D26600.1 </td> <td> NM_002796 </td> <td> proteasome (prosome, macropain) subunit, beta type, 4 </td> <td> PSMB4 </td> <td> 5692 </td> <td> NM_002796 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002862 // negative regulation of inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001530 // lipopolysaccharide binding // inferred from electronic annotation /// 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -20.10 </td> <td> 582.95 </td> <td> -0.31 </td> <td> 0.77 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212589_at </td> <td> 212589_at </td> <td> AI753792 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI753792 /FEA=EST /DB_XREF=gi:5132144 /DB_XREF=est:cr16f06.x2 /CLONE=HBMSC_cr16f06 /UG=Hs.206097 oncogene TC21 </td> <td> AI753792 </td> <td> related RAS viral (r-ras) oncogene homolog 2 </td> <td> RRAS2 </td> <td> 22800 </td> <td> NM_001102669 /// NM_001177314 /// NM_001177315 /// NM_012250 </td> <td> 0001649 // osteoblast differentiation // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> -5.22 </td> <td> 196.16 </td> <td> -0.31 </td> <td> 0.77 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 65588_at </td> <td> 65588_at </td> <td> AA827892 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AA827892:od08e04.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-1367358 /clone_end=3' /gb=AA827892 /gi=2900255 /ug=Hs.239018 /len=622 </td> <td> AA827892 </td> <td> small nucleolar RNA host gene 17 (non-protein coding) </td> <td> SNHG17 </td> <td> 388796 </td> <td> NR_015366 /// NR_027241 </td> <td>  </td> <td>  </td> <td>  </td> <td> -6.20 </td> <td> 237.90 </td> <td> -0.31 </td> <td> 0.77 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210559_s_at </td> <td> 210559_s_at </td> <td> D88357 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D88357.1 /DEF=Homo sapiens mRNA for CDC2 delta T, complete cds. /FEA=mRNA /PROD=CDC2 delta T /DB_XREF=gi:3126638 /UG=Hs.184572 cell division cycle 2, G1 to S and G2 to M /FL=gb:D88357.1 </td> <td> D88357 </td> <td> cyclin-dependent kinase 1 </td> <td> CDK1 </td> <td> 983 </td> <td> NM_001130829 /// NM_001170406 /// NM_001170407 /// NM_001786 /// NM_033379 /// XM_005270303 /// XM_006718082 /// XM_006718083 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000226 // microtubule cytoskeleton organization // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007077 // mitotic nuclear envelope disassembly // traceable author statement /// 0007095 // mitotic G2 DNA damage checkpoint // inferred from electronic annotation /// 0007098 // centrosome cycle // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007344 // pronuclear fusion // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007569 // cell aging // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009636 // response to toxic substance // inferred from electronic annotation /// 0010243 // response to organonitrogen compound // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0014038 // regulation of Schwann cell differentiation // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014075 // response to amine // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0016572 // histone phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0030261 // chromosome condensation // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0034501 // protein localization to kinetochore // inferred from direct assay /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0045995 // regulation of embryonic development // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048678 // response to axon injury // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // inferred from direct assay /// 0004693 // cyclin-dependent protein serine/threonine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030332 // cyclin binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from electronic annotation /// 0035173 // histone kinase activity // inferred from electronic annotation </td> <td> 6.95 </td> <td> 244.57 </td> <td> 0.30 </td> <td> 0.77 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203823_at </td> <td> 203823_at </td> <td> NM_021106 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_021106.1 /DEF=Homo sapiens regulator of G-protein signalling 3 (RGS3), mRNA. /FEA=mRNA /GEN=RGS3 /PROD=regulator of G-protein signalling 3 /DB_XREF=gi:10864074 /UG=Hs.82294 regulator of G-protein signalling 3 /FL=gb:NM_021106.1 gb:U27655.1 </td> <td> NM_021106 </td> <td> regulator of G-protein signaling 3 </td> <td> RGS3 </td> <td> 5998 </td> <td> NM_001276260 /// NM_001276261 /// NM_001276262 /// NM_001282922 /// NM_001282923 /// NM_017790 /// NM_130795 /// NM_134427 /// NM_144488 /// NM_144489 /// XM_006717219 /// XM_006717220 /// XM_006717221 /// XM_006717222 /// XM_006717223 /// XM_006717224 /// XM_006717225 /// XM_006717226 /// XM_006717227 /// XM_006717228 /// XM_006717229 /// XM_006717230 </td> <td> 0000188 // inactivation of MAPK activity // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043547 // positive regulation of GTPase activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // not recorded /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 15.55 </td> <td> 658.98 </td> <td> 0.30 </td> <td> 0.77 </td> <td> 0.81 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209117_at </td> <td> 209117_at </td> <td> U79458 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U79458.1 /DEF=Human WW domain binding protein-2 mRNA, complete cds. /FEA=mRNA /PROD=WW domain binding protein-2 /DB_XREF=gi:4205085 /UG=Hs.231840 WW domain binding protein 2 /FL=gb:U79458.1 </td> <td> U79458 </td> <td> WW domain binding protein 2 </td> <td> WBP2 </td> <td> 23558 </td> <td> NM_012478 </td> <td> 0045184 // establishment of protein localization // inferred from mutant phenotype /// 0045815 // positive regulation of gene expression, epigenetic // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0071391 // cellular response to estrogen stimulus // inferred from mutant phenotype /// 0071442 // positive regulation of histone H3-K14 acetylation // inferred from mutant phenotype </td> <td> 0000790 // nuclear chromatin // inferred from direct assay </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from mutant phenotype /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0031490 // chromatin DNA binding // inferred from mutant phenotype </td> <td> -8.80 </td> <td> 254.70 </td> <td> -0.30 </td> <td> 0.77 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210510_s_at </td> <td> 210510_s_at </td> <td> AF145712 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF145712.1 /DEF=Homo sapiens soluble neuropilin-1 mRNA, complete cds. /FEA=mRNA /PROD=soluble neuropilin-1 /DB_XREF=gi:7271464 /UG=Hs.69285 neuropilin 1 /FL=gb:AF145712.1 </td> <td> AF145712 </td> <td> neuropilin 1 </td> <td> NRP1 </td> <td> 8829 </td> <td> NM_001024628 /// NM_001024629 /// NM_001244972 /// NM_001244973 /// NM_003873 /// NR_045259 /// XM_006717521 /// XM_006717522 /// XM_006717523 /// XM_006717524 /// XM_006717525 /// XM_006717526 </td> <td> 0001525 // angiogenesis // inferred from mutant phenotype /// 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001569 // patterning of blood vessels // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0001938 // positive regulation of endothelial cell proliferation // traceable author statement /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007413 // axonal fasciculation // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // traceable author statement /// 0014911 // positive regulation of smooth muscle cell migration // traceable author statement /// 0016358 // dendrite development // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021636 // trigeminal nerve morphogenesis // inferred from electronic annotation /// 0021675 // nerve development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0031290 // retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 0035729 // cellular response to hepatocyte growth factor stimulus // inferred from mutant phenotype /// 0035767 // endothelial cell chemotaxis // inferred from mutant phenotype /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from sequence or structural similarity /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0038190 // VEGF-activated neuropilin signaling pathway // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048841 // regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048842 // positive regulation of axon extension involved in axon guidance // inferred from sequence or structural similarity /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048846 // axon extension involved in axon guidance // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0050918 // positive chemotaxis // inferred from sequence or structural similarity /// 0060301 // positive regulation of cytokine activity // traceable author statement /// 0060385 // axonogenesis involved in innervation // inferred from sequence or structural similarity /// 0060627 // regulation of vesicle-mediated transport // traceable author statement /// 0060666 // dichotomous subdivision of terminal units involved in salivary gland branching // inferred from electronic annotation /// 0060978 // angiogenesis involved in coronary vascular morphogenesis // inferred from sequence or structural similarity /// 0061299 // retina vasculature morphogenesis in camera-type eye // inferred from sequence or structural similarity /// 0061549 // sympathetic ganglion development // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0071526 // semaphorin-plexin signaling pathway // non-traceable author statement /// 0071679 // commissural neuron axon guidance // inferred from sequence or structural similarity /// 0090259 // regulation of retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 0097102 // endothelial tip cell fate specification // inferred from sequence or structural similarity /// 0097490 // sympathetic neuron projection extension // inferred from sequence or structural similarity /// 0097491 // sympathetic neuron projection guidance // inferred from sequence or structural similarity /// 1901166 // neural crest cell migration involved in autonomic nervous system development // inferred from sequence or structural similarity /// 1902285 // semaphorin-plexin signaling pathway involved in neuron projection guidance // inferred from sequence or structural similarity /// 1902336 // positive regulation of retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 1902946 // protein localization to early endosome // inferred from sequence or structural similarity /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from electronic annotation </td> <td> 0002116 // semaphorin receptor complex // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005769 // early endosome // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from direct assay /// 0005883 // neurofilament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043235 // receptor complex // traceable author statement /// 0097443 // sorting endosome // inferred from sequence or structural similarity </td> <td> 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0005021 // vascular endothelial growth factor-activated receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0015026 // coreceptor activity // traceable author statement /// 0017154 // semaphorin receptor activity // non-traceable author statement /// 0019838 // growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // traceable author statement /// 0019955 // cytokine binding // non-traceable author statement /// 0038085 // vascular endothelial growth factor binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 4.33 </td> <td> 142.54 </td> <td> 0.30 </td> <td> 0.77 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217846_at </td> <td> 217846_at </td> <td> NM_005051 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005051.1 /DEF=Homo sapiens glutaminyl-tRNA synthetase (QARS), mRNA. /FEA=mRNA /GEN=QARS /PROD=glutaminyl-tRNA synthetase /DB_XREF=gi:4826959 /UG=Hs.79322 glutaminyl-tRNA synthetase /FL=gb:AF130067.1 gb:BC000394.1 gb:BC001772.1 gb:NM_005051.1 </td> <td> NM_005051 </td> <td> microRNA 6890 /// glutaminyl-tRNA synthetase </td> <td> MIR6890 /// QARS </td> <td> 5859 /// 102465536 </td> <td> NM_001272073 /// NM_005051 /// NR_073590 /// NR_106950 </td> <td> 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006425 // glutaminyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0043039 // tRNA aminoacylation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004819 // glutamine-tRNA ligase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds // inferred from electronic annotation </td> <td> -13.73 </td> <td> 568.74 </td> <td> -0.30 </td> <td> 0.77 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212166_at </td> <td> 212166_at </td> <td> H38643 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:H38643 /FEA=EST /DB_XREF=gi:908142 /DB_XREF=est:yp62f02.s1 /CLONE=IMAGE:192027 /UG=Hs.172685 RAN binding protein 16 </td> <td> H38643 </td> <td> exportin 7 </td> <td> XPO7 </td> <td> 23039 </td> <td> NM_001100161 /// NM_001100162 /// NM_015024 </td> <td> 0006611 // protein export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005643 // nuclear pore // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0005049 // nuclear export signal receptor activity // inferred from direct assay /// 0005488 // binding // inferred from electronic annotation /// 0008536 // Ran GTPase binding // inferred from electronic annotation </td> <td> 6.22 </td> <td> 179.36 </td> <td> 0.30 </td> <td> 0.77 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211343_s_at </td> <td> 211343_s_at </td> <td> M33653 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M33653.1 /DEF=Human (clones HT-125,133) alpha-2 type IV collagen (COL4A2) mRNA, complete cds.  /FEA=mRNA /GEN=COL4A2 /PROD=alpha-2 type IV collagen /DB_XREF=gi:180828 /UG=Hs.211933 collagen, type XIII, alpha 1 /FL=gb:M33653.1 </td> <td> M33653 </td> <td> collagen, type XIII, alpha 1 </td> <td> COL13A1 </td> <td> 1305 </td> <td> NM_001130103 /// NM_005203 /// NM_080798 /// NM_080799 /// NM_080800 /// NM_080801 /// NM_080802 /// NM_080803 /// NM_080804 /// NM_080805 /// NM_080806 /// NM_080807 /// NM_080808 /// NM_080809 /// NM_080810 /// NM_080811 /// NM_080812 /// NM_080813 /// NM_080814 /// NM_080815 /// XM_006717632 </td> <td> 0001503 // ossification // inferred from electronic annotation /// 0001763 // morphogenesis of a branching structure // inferred from sequence or structural similarity /// 0001958 // endochondral ossification // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from physical interaction /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016337 // single organismal cell-cell adhesion // inferred from expression pattern /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005600 // collagen type XIII trimer // traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from direct assay </td> <td> -9.75 </td> <td> 446.40 </td> <td> -0.30 </td> <td> 0.77 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209058_at </td> <td> 209058_at </td> <td> AB002282 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AB002282.1 /DEF=Homo sapiens mRNA for hMBF1alpha, complete cds. /FEA=mRNA /PROD=hMBF1alpha /DB_XREF=gi:6526354 /UG=Hs.174050 endothelial differentiation-related factor 1 /FL=gb:NM_003792.1 gb:AB002282.1 </td> <td> AB002282 </td> <td> endothelial differentiation-related factor 1 </td> <td> EDF1 </td> <td> 8721 </td> <td> NM_001281297 /// NM_001281298 /// NM_001281299 /// NM_003792 /// NM_153200 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0019216 // regulation of lipid metabolic process // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0045446 // endothelial cell differentiation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-templated // traceable author statement </td> <td> 0005622 // intracellular // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005634 // nucleus // non-traceable author statement /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -5.60 </td> <td> 295.27 </td> <td> -0.30 </td> <td> 0.77 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202595_s_at </td> <td> 202595_s_at </td> <td> AF161461 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF161461.1 /DEF=Homo sapiens HSPC112 mRNA, complete cds. /FEA=mRNA /PROD=HSPC112 /DB_XREF=gi:6841445 /UG=Hs.11000 leptin receptor overlapping transcript-like 1 /FL=gb:BC000642.1 gb:AF063605.1 gb:AF161461.1 gb:NM_015344.1 </td> <td> AF161461 </td> <td> leptin receptor overlapping transcript-like 1 </td> <td> LEPROTL1 </td> <td> 23484 </td> <td> NM_001128208 /// NM_015344 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td>  </td> <td> -5.35 </td> <td> 165.35 </td> <td> -0.30 </td> <td> 0.77 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217761_at </td> <td> 217761_at </td> <td> NM_018269 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018269.1 /DEF=Homo sapiens hypothetical protein FLJ10913 (FLJ10913), mRNA. /FEA=mRNA /GEN=FLJ10913 /PROD=hypothetical protein FLJ10913 /DB_XREF=gi:8922761 /UG=Hs.64322 hypothetical protein FLJ10913 /FL=gb:BC001467.1 gb:NM_018269.1 </td> <td> NM_018269 </td> <td> acireductone dioxygenase 1 </td> <td> ADI1 </td> <td> 55256 </td> <td> NM_018269 /// XM_005264696 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006595 // polyamine metabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // inferred from direct assay /// 0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation </td> <td> 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0010309 // acireductone dioxygenase [iron(II)-requiring] activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> 7.78 </td> <td> 230.39 </td> <td> 0.30 </td> <td> 0.77 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202282_at </td> <td> 202282_at </td> <td> NM_004493 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004493.1 /DEF=Homo sapiens hydroxyacyl-Coenzyme A dehydrogenase, type II (HADH2), mRNA.  /FEA=mRNA /GEN=HADH2 /PROD=hydroxyacyl-Coenzyme A dehydrogenase, type II /DB_XREF=gi:4758503 /UG=Hs.171280 hydroxyacyl-Coenzyme A dehydrogenase, type II /FL=gb:BC000372.1 gb:BC000829.1 gb:U73514.1 gb:U96132.1 gb:AF035555.1 gb:AF069134.1 gb:NM_004493.1 </td> <td> NM_004493 </td> <td> hydroxysteroid (17-beta) dehydrogenase 10 </td> <td> HSD17B10 </td> <td> 3028 </td> <td> NM_001037811 /// NM_004493 </td> <td> 0006629 // lipid metabolic process // traceable author statement /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009083 // branched-chain amino acid catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement </td> <td> 0003857 // 3-hydroxyacyl-CoA dehydrogenase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008709 // cholate 7-alpha-dehydrogenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0030283 // testosterone dehydrogenase [NAD(P)] activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0047015 // 3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity // inferred from electronic annotation </td> <td> -6.53 </td> <td> 224.86 </td> <td> -0.30 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 221767_x_at </td> <td> 221767_x_at </td> <td> AA515560 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA515560 /FEA=EST /DB_XREF=gi:2255160 /DB_XREF=est:ni42c09.s1 /CLONE=IMAGE:979504 /UG=Hs.283473 hypothetical protein PRO2900 </td> <td> AA515560 </td> <td> high density lipoprotein binding protein </td> <td> HDLBP </td> <td> 3069 </td> <td> NM_001243900 /// NM_005336 /// NM_203346 /// XM_005247000 /// XM_005247001 /// XM_005247002 /// XM_005247003 /// XM_006712475 /// XM_006712476 </td> <td> 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -8.00 </td> <td> 416.48 </td> <td> -0.30 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203166_at </td> <td> 203166_at </td> <td> NM_006324 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006324.1 /DEF=Homo sapiens craniofacial development protein 1 (CFDP1), mRNA. /FEA=mRNA /GEN=CFDP1 /PROD=craniofacial development protein 1 /DB_XREF=gi:5453566 /UG=Hs.296460 craniofacial development protein 1 /FL=gb:BC000991.2 gb:AB009285.1 gb:NM_006324.1 </td> <td> NM_006324 </td> <td> craniofacial development protein 1 </td> <td> CFDP1 </td> <td> 10428 </td> <td> NM_006324 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 2000270 // negative regulation of fibroblast apoptotic process // inferred from electronic annotation </td> <td>  </td> <td>  </td> <td> -4.72 </td> <td> 159.59 </td> <td> -0.30 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 37965_at </td> <td> 37965_at </td> <td> AA181053 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AA181053:zp66g11.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-625220 /clone_end=3' /gb=AA181053 /gi=1764536 /ug=Hs.8836 /len=626 </td> <td> AA181053 </td> <td> parvin, beta </td> <td> PARVB </td> <td> 29780 </td> <td> NM_001003828 /// NM_001243385 /// NM_001243386 /// NM_013327 /// XM_005261593 /// XM_005261594 /// XM_005261595 /// XM_005261596 /// XM_006724236 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation /// 0030031 // cell projection assembly // inferred from mutant phenotype /// 0030032 // lamellipodium assembly // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0034329 // cell junction assembly // traceable author statement /// 0071963 // establishment or maintenance of cell polarity regulating cell shape // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030017 // sarcomere // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -15.88 </td> <td> 337.84 </td> <td> -0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218659_at </td> <td> 218659_at </td> <td> NM_018263 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018263.1 /DEF=Homo sapiens hypothetical protein FLJ10898 (FLJ10898), mRNA. /FEA=mRNA /GEN=FLJ10898 /PROD=hypothetical protein FLJ10898 /DB_XREF=gi:8922749 /UG=Hs.13801 KIAA1685 protein /FL=gb:NM_018263.1 </td> <td> NM_018263 </td> <td> additional sex combs like transcriptional regulator 2 </td> <td> ASXL2 </td> <td> 55252 </td> <td> NM_018263 /// XM_006712039 /// XM_006712040 </td> <td> 0003007 // heart morphogenesis // inferred from electronic annotation /// 0006323 // DNA packaging // traceable author statement /// 0006325 // chromatin organization // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006473 // protein acetylation // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from direct assay /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0035360 // positive regulation of peroxisome proliferator activated receptor signaling pathway // inferred from direct assay /// 0035909 // aorta morphogenesis // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0090398 // cellular senescence // inferred from mutant phenotype </td> <td> 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0070776 // MOZ/MORF histone acetyltransferase complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0042975 // peroxisome proliferator activated receptor binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -22.63 </td> <td> 327.06 </td> <td> -0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200722_s_at </td> <td> 200722_s_at </td> <td> BG258784 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG258784 /FEA=EST /DB_XREF=gi:12768600 /DB_XREF=est:602378049F1 /CLONE=IMAGE:4508820 /UG=Hs.278672 membrane component, chromosome 11, surface marker 1 /FL=gb:BC001731.1 gb:NM_005898.1 </td> <td> BG258784 </td> <td> cell cycle associated protein 1 </td> <td> CAPRIN1 </td> <td> 4076 </td> <td> NM_005898 /// NM_203364 </td> <td> 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity </td> <td> 0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -16.18 </td> <td> 511.06 </td> <td> -0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 221488_s_at </td> <td> 221488_s_at </td> <td> AF230924 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF230924.1 /DEF=Homo sapiens brain acetylcholinesterase putative membrane anchor mRNA, complete cds.  /FEA=mRNA /PROD=brain acetylcholinesterase putative membraneanchor /DB_XREF=gi:7341254 /UG=Hs.107187 divalent cation tolerant protein CUTA /FL=gb:AF230924.1 </td> <td> AF230924 </td> <td> cutA divalent cation tolerance homolog (E. coli) </td> <td> CUTA </td> <td> 51596 </td> <td> NM_001014433 /// NM_001014837 /// NM_001014838 /// NM_001014840 /// NM_015921 /// XM_006715108 /// XM_006726096 </td> <td> 0008104 // protein localization // inferred from direct assay /// 0010038 // response to metal ion // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> 9.57 </td> <td> 302.09 </td> <td> 0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202845_s_at </td> <td> 202845_s_at </td> <td> NM_006788 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006788.1 /DEF=Homo sapiens ralA binding protein 1 (RALBP1), mRNA. /FEA=mRNA /GEN=RALBP1 /PROD=ralA binding protein 1 /DB_XREF=gi:5803144 /UG=Hs.75447 ralA binding protein 1 /FL=gb:NM_006788.1 gb:L42542.1 </td> <td> NM_006788 </td> <td> ralA binding protein 1 </td> <td> RALBP1 </td> <td> 10928 </td> <td> NM_006788 /// XM_006722295 /// XM_006722296 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from direct assay /// 0006935 // chemotaxis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from physical interaction /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0032855 // positive regulation of Rac GTPase activity // inferred from direct assay /// 0032855 // positive regulation of Rac GTPase activity // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from direct assay /// 0043089 // positive regulation of Cdc42 GTPase activity // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay </td> <td> 0005096 // GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016887 // ATPase activity // inferred from direct assay /// 0017160 // Ral GTPase binding // inferred from physical interaction /// 0030675 // Rac GTPase activator activity // inferred from direct assay /// 0043492 // ATPase activity, coupled to movement of substances // inferred from direct assay /// 0048365 // Rac GTPase binding // inferred from physical interaction </td> <td> 9.82 </td> <td> 265.26 </td> <td> 0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 219590_x_at </td> <td> 219590_x_at </td> <td> NM_015958 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_015958.1 /DEF=Homo sapiens CGI-30 protein (LOC51611), mRNA. /FEA=mRNA /GEN=LOC51611 /PROD=CGI-30 protein /DB_XREF=gi:7706271 /UG=Hs.19978 CGI-30 protein /FL=gb:AF132964.1 gb:NM_015958.1 </td> <td> NM_015958 </td> <td> diphthamide biosynthesis 5 </td> <td> DPH5 </td> <td> 51611 </td> <td> NM_001077394 /// NM_001077395 /// NM_015958 /// XM_005270938 /// XM_005270939 /// XM_005270941 /// XM_006710683 </td> <td> 0008152 // metabolic process // inferred from electronic annotation /// 0017183 // peptidyl-diphthamide biosynthetic process from peptidyl-histidine // inferred from electronic annotation /// 0017183 // peptidyl-diphthamide biosynthetic process from peptidyl-histidine // non-traceable author statement /// 0032259 // methylation // inferred from electronic annotation </td> <td>  </td> <td> 0004164 // diphthine synthase activity // non-traceable author statement /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation </td> <td> -7.35 </td> <td> 242.38 </td> <td> -0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208949_s_at </td> <td> 208949_s_at </td> <td> BC001120 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001120.1 /DEF=Homo sapiens, lectin, galactoside-binding, soluble, 3 (galectin 3), clone MGC:2058, mRNA, complete cds.  /FEA=mRNA /PROD=lectin, galactoside-binding, soluble, 3(galectin 3) /DB_XREF=gi:12654570 /UG=Hs.621 lectin, galactoside-binding, soluble, 3 (galectin 3) /FL=gb:M35368.1 gb:BC001120.1 gb:M57710.1 gb:M36682.1 gb:AB006780.1 gb:NM_002306.1 </td> <td> BC001120 </td> <td> lectin, galactoside-binding, soluble, 3 </td> <td> LGALS3 </td> <td> 3958 </td> <td> NM_001177388 /// NM_002306 /// NR_003225 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0002376 // immune system process // inferred from electronic annotation /// 0002548 // monocyte chemotaxis // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030593 // neutrophil chemotaxis // inferred from direct assay /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0042129 // regulation of T cell proliferation // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045806 // negative regulation of endocytosis // inferred from direct assay /// 0048245 // eosinophil chemotaxis // inferred from direct assay /// 0048246 // macrophage chemotaxis // inferred from direct assay /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050918 // positive chemotaxis // inferred from direct assay /// 0070232 // regulation of T cell apoptotic process // inferred from direct assay /// 0071674 // mononuclear cell migration // inferred from direct assay /// 0071677 // positive regulation of mononuclear cell migration // inferred from direct assay /// 0090280 // positive regulation of calcium ion import // inferred from direct assay /// 1902041 // regulation of extrinsic apoptotic signaling pathway via death domain receptors // inferred from mutant phenotype /// 2000521 // negative regulation of immunological synapse formation // inferred from sequence or structural similarity /// 2001189 // negative regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell // inferred from sequence or structural similarity /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0001772 // immunological synapse // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019863 // IgE binding // inferred from direct assay /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0042056 // chemoattractant activity // inferred from direct assay /// 0043236 // laminin binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -8.48 </td> <td> 326.71 </td> <td> -0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203190_at </td> <td> 203190_at </td> <td> NM_002496 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002496.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) Fe-S protein 8 (23kD) (NADH-coenzyme Q reductase) (NDUFS8), mRNA.  /FEA=mRNA /GEN=NDUFS8 /PROD=NADH dehydrogenase (ubiquinone) Fe-S protein 8(23kD) (NADH-coenzyme Q reductase) /DB_XREF=gi:4505370 /UG=Hs.90443 NADH dehydrogenase (ubiquinone) Fe-S protein 8 (23kD) (NADH-coenzyme Q reductase) /FL=gb:U65579.1 gb:NM_002496.1 </td> <td> NM_002496 </td> <td> microRNA 4691 /// microRNA 7113 /// NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) </td> <td> MIR4691 /// MIR7113 /// NDUFS8 </td> <td> 4728 /// 100616403 /// 102465669 </td> <td> NM_002496 /// NR_039840 /// NR_106963 /// XM_005274013 /// XM_005274014 /// XM_005274015 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006979 // response to oxidative stress // inferred from direct assay /// 0022904 // respiratory electron transport chain // traceable author statement /// 0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // inferred from mutant phenotype /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0003954 // NADH dehydrogenase activity // inferred from mutant phenotype /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from mutant phenotype /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016651 // oxidoreductase activity, acting on NAD(P)H // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation </td> <td> 5.38 </td> <td> 202.86 </td> <td> 0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 1598_g_at </td> <td> 1598_g_at </td> <td> L13720 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> L13720 /FEATURE= /DEFINITION=HUMGAS Homo sapiens growth-arrest-specific protein (gas) mRNA, complete cds </td> <td> L13720 </td> <td> growth arrest-specific 6 </td> <td> GAS6 </td> <td> 2621 </td> <td> NM_000820 /// NM_001143945 /// NM_001143946 </td> <td> 0001764 // neuron migration // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0001961 // positive regulation of cytokine-mediated signaling pathway // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0003104 // positive regulation of glomerular filtration // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006508 // proteolysis // traceable author statement /// 0006909 // phagocytosis // inferred from direct assay /// 0007050 // cell cycle arrest // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007167 // enzyme linked receptor protein signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010804 // negative regulation of tumor necrosis factor-mediated signaling pathway // inferred from direct assay /// 0010934 // macrophage cytokine production // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0017187 // peptidyl-glutamic acid carboxylation // traceable author statement /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019064 // fusion of virus membrane with host plasma membrane // inferred from direct assay /// 0019079 // viral genome replication // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031589 // cell-substrate adhesion // inferred from electronic annotation /// 0032008 // positive regulation of TOR signaling // inferred from sequence or structural similarity /// 0032148 // activation of protein kinase B activity // inferred from sequence or structural similarity /// 0032689 // negative regulation of interferon-gamma production // inferred from direct assay /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0032720 // negative regulation of tumor necrosis factor production // inferred from direct assay /// 0032825 // positive regulation of natural killer cell differentiation // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033159 // negative regulation of protein import into nucleus, translocation // inferred from direct assay /// 0035457 // cellular response to interferon-alpha // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0035754 // B cell chemotaxis // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043277 // apoptotic cell clearance // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043491 // protein kinase B signaling // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0046718 // viral entry into host cell // inferred from direct assay /// 0046813 // receptor-mediated virion attachment to host cell // inferred from direct assay /// 0046827 // positive regulation of protein export from nucleus // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0050711 // negative regulation of interleukin-1 secretion // inferred from direct assay /// 0050766 // positive regulation of phagocytosis // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling // inferred from direct assay /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 0070168 // negative regulation of biomineral tissue development // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070527 // platelet aggregation // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 0071307 // cellular response to vitamin K // inferred from direct assay /// 0071333 // cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0072661 // protein targeting to plasma membrane // inferred from direct assay /// 0085029 // extracellular matrix assembly // inferred from sequence or structural similarity /// 0097028 // dendritic cell differentiation // inferred from expression pattern /// 0097241 // hematopoietic stem cell migration to bone marrow // inferred from direct assay /// 1900142 // negative regulation of oligodendrocyte apoptotic process // inferred from direct assay /// 1900165 // negative regulation of interleukin-6 secretion // inferred from direct assay /// 2000270 // negative regulation of fibroblast apoptotic process // inferred from direct assay /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from direct assay /// 2000510 // positive regulation of dendritic cell chemotaxis // inferred from direct assay /// 2000533 // negative regulation of renal albumin absorption // inferred from sequence or structural similarity /// 2000669 // negative regulation of dendritic cell apoptotic process // inferred from direct assay </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005796 // Golgi lumen // traceable author statement /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001786 // phosphatidylserine binding // inferred from direct assay /// 0005102 // receptor binding // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005245 // voltage-gated calcium channel activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048018 // receptor agonist activity // inferred from direct assay /// 0060090 // binding, bridging // inferred from direct assay </td> <td> -5.40 </td> <td> 339.88 </td> <td> -0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201740_at </td> <td> 201740_at </td> <td> NM_004551 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004551.1 /DEF=Homo sapiens NADH dehydrogenase (ubiquinone) Fe-S protein 3 (30kD) (NADH-coenzyme Q reductase) (NDUFS3), mRNA.  /FEA=mRNA /GEN=NDUFS3 /PROD=NADH dehydrogenase (ubiquinone) Fe-S protein 3(30kD) (NADH-coenzyme Q reductase) /DB_XREF=gi:4758787 /UG=Hs.5273 NADH dehydrogenase (ubiquinone) Fe-S protein 3 (30kD) (NADH-coenzyme Q reductase) /FL=gb:BC000617.1 gb:AF067139.1 gb:NM_004551.1 gb:AF100743.1 </td> <td> NM_004551 </td> <td> NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) </td> <td> NDUFS3 </td> <td> 4722 </td> <td> NM_004551 </td> <td> 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0021762 // substantia nigra development // inferred from expression pattern /// 0022904 // respiratory electron transport chain // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from mutant phenotype /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation </td> <td> 0003954 // NADH dehydrogenase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0009055 // electron carrier activity // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016651 // oxidoreductase activity, acting on NAD(P)H // inferred from electronic annotation </td> <td> -15.95 </td> <td> 395.52 </td> <td> -0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 204427_s_at </td> <td> 204427_s_at </td> <td> NM_006815 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006815.1 /DEF=Homo sapiens coated vesicle membrane protein (RNP24), mRNA. /FEA=mRNA /GEN=RNP24 /PROD=coated vesicle membrane protein /DB_XREF=gi:5803148 /UG=Hs.323378 coated vesicle membrane protein /FL=gb:NM_006815.1 </td> <td> NM_006815 </td> <td> transmembrane emp24 domain trafficking protein 2 </td> <td> TMED2 </td> <td> 10959 </td> <td> NM_006815 /// XM_005253544 </td> <td> 0001893 // maternal placenta development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from direct assay /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0034260 // negative regulation of GTPase activity // inferred from direct assay /// 0035459 // cargo loading into vesicle // traceable author statement /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0072661 // protein targeting to plasma membrane // inferred from direct assay </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from sequence or structural similarity /// 0030137 // COPI-coated vesicle // inferred from sequence or structural similarity /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0030663 // COPI-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042589 // zymogen granule membrane // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 17.38 </td> <td> 398.96 </td> <td> 0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 221474_at </td> <td> 221474_at </td> <td> U26162 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U26162.1 /DEF=Human myosin regulatory light chain mRNA, complete cds. /FEA=mRNA /PROD=myosin regulatory light chain /DB_XREF=gi:829622 /UG=Hs.180224 death-associated protein 6 /FL=gb:BC004994.1 gb:D50372.1 gb:U26162.1 </td> <td> U26162 </td> <td> myosin, light chain 12B, regulatory </td> <td> MYL12B </td> <td> 103910 </td> <td> NM_001144944 /// NM_001144945 /// NM_001144946 /// NM_033546 </td> <td> 0006936 // muscle contraction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0016460 // myosin II complex // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -77.45 </td> <td> 1919.05 </td> <td> -0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218998_at </td> <td> 218998_at </td> <td> NM_017832 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017832.1 /DEF=Homo sapiens hypothetical protein FLJ20457 (FLJ20457), mRNA. /FEA=mRNA /GEN=FLJ20457 /PROD=hypothetical protein FLJ20457 /DB_XREF=gi:8923430 /UG=Hs.29276 hypothetical protein FLJ20457 /FL=gb:AF153417.1 gb:NM_017832.1 </td> <td> NM_017832 </td> <td> family with sequence similarity 206, member A </td> <td> FAM206A </td> <td> 54942 </td> <td> NM_017832 </td> <td> 0006546 // glycine catabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005960 // glycine cleavage complex // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td>  </td> <td> 4.87 </td> <td> 84.79 </td> <td> 0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200076_s_at </td> <td> 200076_s_at </td> <td> BC006479 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006479.1 /DEF=Homo sapiens, hypothetical protein MGC2749, clone MGC:4376, mRNA, complete cds.  /FEA=mRNA /PROD=hypothetical protein MGC2749 /DB_XREF=gi:13623702 /FL=gb:BC006479.1 </td> <td> BC006479 </td> <td> KxDL motif containing 1 </td> <td> KXD1 </td> <td> 79036 </td> <td> NM_001171948 /// NM_001171949 /// NM_024069 /// XM_005260073 /// XM_006722883 </td> <td> 0016192 // vesicle-mediated transport // inferred from sequence or structural similarity </td> <td> 0031083 // BLOC-1 complex // inferred from sequence or structural similarity </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 5.22 </td> <td> 211.31 </td> <td> 0.29 </td> <td> 0.78 </td> <td> 0.82 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209082_s_at </td> <td> 209082_s_at </td> <td> AF018081 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF018081.1 /DEF=Homo sapiens type XVIII collagen (COL18A1) mRNA, alternatively spliced, long form, complete cds.  /FEA=mRNA /GEN=COL18A1 /PROD=type XVIII collagen /DB_XREF=gi:2920534 /UG=Hs.78409 collagen, type XVIII, alpha 1 /FL=gb:NM_030582.1 gb:AF018081.1 gb:AF184060.1 gb:NM_016214.1 </td> <td> AF018081 </td> <td> collagen, type XVIII, alpha 1 </td> <td> COL18A1 </td> <td> 80781 </td> <td> NM_030582 /// NM_130444 /// NM_130445 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001886 // endothelial cell morphogenesis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030574 // collagen catabolic process // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0051599 // response to hydrostatic pressure // inferred from electronic annotation /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -9.58 </td> <td> 463.51 </td> <td> -0.28 </td> <td> 0.78 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202011_at </td> <td> 202011_at </td> <td> NM_003257 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003257.1 /DEF=Homo sapiens tight junction protein 1 (zona occludens 1) (TJP1), mRNA.  /FEA=mRNA /GEN=TJP1 /PROD=tight junction protein 1 (zona occludens 1) /DB_XREF=gi:4507516 /UG=Hs.74614 tight junction protein 1 (zona occludens 1) /FL=gb:L14837.1 gb:NM_003257.1 </td> <td> NM_003257 </td> <td> tight junction protein 1 </td> <td> TJP1 </td> <td> 7082 </td> <td> NM_003257 /// NM_175610 /// XM_005254616 /// XM_005254617 /// XM_005254618 /// XM_005254619 /// XM_005254620 /// XM_005254621 /// XM_006720660 /// XM_006720661 /// XM_006725553 /// XM_006725554 /// XM_006725555 /// XM_006725556 /// XM_006725557 /// XM_006725558 /// XM_006725559 /// XM_006725560 </td> <td> 0001825 // blastocyst formation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0007043 // cell-cell junction assembly // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0035329 // hippo signaling // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043116 // negative regulation of vascular permeability // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0071000 // response to magnetism // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 1901350 // cell-cell signaling involved in cell-cell junction organization // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0014704 // intercalated disc // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016327 // apicolateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0043296 // apical junction complex // inferred from direct assay /// 0045177 // apical part of cell // inferred from direct assay /// 0046581 // intercellular canaliculus // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 11.97 </td> <td> 527.24 </td> <td> 0.28 </td> <td> 0.79 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212020_s_at </td> <td> 212020_s_at </td> <td> AU152107 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AU152107 /FEA=EST /DB_XREF=gi:11013628 /DB_XREF=est:AU152107 /CLONE=NT2RP3000209 /UG=Hs.80976 antigen identified by monoclonal antibody Ki-67 </td> <td> AU152107 </td> <td> marker of proliferation Ki-67 </td> <td> MKI67 </td> <td> 4288 </td> <td> NM_001145966 /// NM_002417 /// XM_006717864 </td> <td> 0006259 // DNA metabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007126 // meiotic nuclear division // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030212 // hyaluronan metabolic process // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0034605 // cellular response to heat // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000793 // condensed chromosome // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 6.50 </td> <td> 152.75 </td> <td> 0.28 </td> <td> 0.79 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 221761_at </td> <td> 221761_at </td> <td> AA628948 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA628948 /FEA=EST /DB_XREF=gi:2541335 /DB_XREF=est:af28f07.s1 /CLONE=IMAGE:1032997 /UG=Hs.90011 adenylosuccinate synthase /FL=gb:NM_001126.1 </td> <td> AA628948 </td> <td> adenylosuccinate synthase </td> <td> ADSS </td> <td> 159 </td> <td> NM_001126 </td> <td> 0002376 // immune system process // non-traceable author statement /// 0006144 // purine nucleobase metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006167 // AMP biosynthetic process // inferred from direct assay /// 0006167 // AMP biosynthetic process // non-traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006531 // aspartate metabolic process // inferred from electronic annotation /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0014074 // response to purine-containing compound // inferred from electronic annotation /// 0044208 // 'de novo' AMP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046040 // IMP metabolic process // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0060359 // response to ammonium ion // inferred from electronic annotation /// 0071257 // cellular response to electrical stimulus // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004019 // adenylosuccinate synthase activity // inferred from direct assay /// 0004019 // adenylosuccinate synthase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // non-traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -10.23 </td> <td> 434.06 </td> <td> -0.28 </td> <td> 0.79 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202767_at </td> <td> 202767_at </td> <td> NM_001610 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001610.1 /DEF=Homo sapiens acid phosphatase 2, lysosomal (ACP2), mRNA. /FEA=mRNA /GEN=ACP2 /PROD=lysosomal acid phosphatase 2 precursor /DB_XREF=gi:4557009 /UG=Hs.75589 acid phosphatase 2, lysosomal /FL=gb:BC003160.1 gb:NM_001610.1 </td> <td> NM_001610 </td> <td> acid phosphatase 2, lysosomal </td> <td> ACP2 </td> <td> 53 </td> <td> NM_001131064 /// NM_001610 /// XM_005252984 /// XM_005252985 /// XR_242812 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement </td> <td> 0005764 // lysosome // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003993 // acid phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -5.18 </td> <td> 133.81 </td> <td> -0.28 </td> <td> 0.79 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 213196_at </td> <td> 213196_at </td> <td> AI924293 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI924293 /FEA=EST /DB_XREF=gi:5660257 /DB_XREF=est:wn55a06.x1 /CLONE=IMAGE:2449330 /UG=Hs.301094 KIAA0326 protein </td> <td> AI924293 </td> <td> zinc finger protein 629 </td> <td> ZNF629 </td> <td> 23361 </td> <td> NM_001080417 /// XM_005255222 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // not recorded </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -5.20 </td> <td> 121.90 </td> <td> -0.27 </td> <td> 0.79 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208864_s_at </td> <td> 208864_s_at </td> <td> AF313911 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF313911.1 /DEF=Homo sapiens thioredoxin mRNA, complete cds. /FEA=mRNA /PROD=thioredoxin /DB_XREF=gi:11345419 /UG=Hs.76136 thioredoxin /FL=gb:AF313911.1 gb:BC003377.1 gb:J04026.1 gb:NM_003329.1 gb:AF276919.1 gb:AY004872.1 </td> <td> AF313911 </td> <td> thioredoxin </td> <td> TXN </td> <td> 7295 </td> <td> NM_001244938 /// NM_003329 /// XM_006717276 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009314 // response to radiation // inferred from direct assay /// 0010269 // response to selenium ion // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016999 // antibiotic metabolic process // inferred from electronic annotation /// 0033158 // regulation of protein import into nucleus, translocation // inferred from direct assay /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0046826 // negative regulation of protein export from nucleus // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071455 // cellular response to hyperoxia // inferred from electronic annotation /// 0071548 // response to dexamethasone // inferred from electronic annotation /// 0097068 // response to thyroxine // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015037 // peptide disulfide oxidoreductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 13.03 </td> <td> 643.01 </td> <td> 0.27 </td> <td> 0.79 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200693_at </td> <td> 200693_at </td> <td> NM_006826 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006826.1 /DEF=Homo sapiens tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, theta polypeptide (YWHAQ), mRNA.  /FEA=mRNA /GEN=YWHAQ /PROD=tyrosine 3-monooxygenasetryptophan5-monooxygenase activation protein, theta polypeptide /DB_XREF=gi:5803226 /UG=Hs.74405 tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, theta polypeptide /FL=gb:NM_006826.1 </td> <td> NM_006826 </td> <td> tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta </td> <td> YWHAQ </td> <td> 10971 </td> <td> NM_006826 </td> <td> 0006605 // protein targeting // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0061024 // membrane organization // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0043234 // protein complex // inferred from physical interaction /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> -13.92 </td> <td> 1642.06 </td> <td> -0.27 </td> <td> 0.79 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211779_x_at </td> <td> 211779_x_at </td> <td> BC006155 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006155.1 /DEF=Homo sapiens, clone MGC:13188, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:13188) /DB_XREF=gi:13544040 /FL=gb:BC006155.1 </td> <td> BC006155 </td> <td> adaptor-related protein complex 2, alpha 2 subunit </td> <td> AP2A2 </td> <td> 161 </td> <td> NM_001242837 /// NM_012305 /// XM_006718159 /// XM_006718160 /// XR_242779 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050690 // regulation of defense response to virus by virus // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // non-traceable author statement /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity </td> <td> 9.33 </td> <td> 370.59 </td> <td> 0.27 </td> <td> 0.79 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202380_s_at </td> <td> 202380_s_at </td> <td> NM_005385 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005385.2 /DEF=Homo sapiens natural killer-tumor recognition sequence (NKTR), mRNA.  /FEA=mRNA /GEN=NKTR /PROD=natural killer-tumor recognition sequence /DB_XREF=gi:6631099 /UG=Hs.241493 natural killer-tumor recognition sequence /FL=gb:L04288.2 gb:NM_005385.2 </td> <td> NM_005385 </td> <td> natural killer cell triggering receptor </td> <td> NKTR </td> <td> 4820 </td> <td> NM_001012651 /// NM_005385 /// XM_005265173 /// XM_005265174 /// XM_005265176 /// XM_005265178 /// XM_006713171 /// XM_006713172 /// XM_006713173 /// XM_006713174 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation </td> <td> 0016020 // membrane // inferred from electronic annotation </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0016018 // cyclosporin A binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation </td> <td> 5.67 </td> <td> 89.71 </td> <td> 0.27 </td> <td> 0.79 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203554_x_at </td> <td> 203554_x_at </td> <td> NM_004219 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004219.2 /DEF=Homo sapiens pituitary tumor-transforming 1 (PTTG1), mRNA. /FEA=mRNA /GEN=PTTG1 /PROD=pituitary tumor-transforming protein 1 /DB_XREF=gi:11038651 /UG=Hs.252587 pituitary tumor-transforming 1 /FL=gb:NM_004219.2 gb:AF095287.1 gb:AF062649.1 gb:AF075242.1 </td> <td> NM_004219 </td> <td> pituitary tumor-transforming 1 </td> <td> PTTG1 </td> <td> 9232 </td> <td> NM_001282382 /// NM_001282383 /// NM_004219 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0010951 // negative regulation of endopeptidase activity // non-traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement </td> <td> 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004869 // cysteine-type endopeptidase inhibitor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation </td> <td> -17.53 </td> <td> 486.04 </td> <td> -0.27 </td> <td> 0.79 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201087_at </td> <td> 201087_at </td> <td> NM_002859 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002859.1 /DEF=Homo sapiens paxillin (PXN), mRNA. /FEA=mRNA /GEN=PXN /PROD=paxillin /DB_XREF=gi:4506344 /UG=Hs.102497 paxillin /FL=gb:NM_002859.1 gb:U14588.1 </td> <td> NM_002859 </td> <td> paxillin </td> <td> PXN </td> <td> 5829 </td> <td> NM_001080855 /// NM_001243756 /// NM_002859 /// NM_025157 /// XM_005253910 /// XM_005253912 /// XM_005253913 /// XM_005253914 /// XM_005253915 /// XM_005253916 /// XM_005253917 /// XM_006719531 /// XM_006719532 /// XM_006719533 /// XM_006719534 /// XM_006719535 /// XM_006719536 /// XM_006719537 /// XM_006719538 /// XM_006719539 /// XR_243019 </td> <td> 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007172 // signal complex assembly // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034614 // cellular response to reactive oxygen species // inferred from expression pattern /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0048754 // branching morphogenesis of an epithelial tube // inferred from electronic annotation /// 0060396 // growth hormone receptor signaling pathway // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation </td> <td> 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051435 // BH4 domain binding // inferred from electronic annotation </td> <td> -10.10 </td> <td> 462.73 </td> <td> -0.27 </td> <td> 0.79 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200017_at </td> <td> 200017_at </td> <td> NM_002954 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002954.1 /DEF=Homo sapiens ribosomal protein S27a (RPS27A), mRNA. /FEA=mRNA /GEN=RPS27A /PROD=ribosomal protein S27a /DB_XREF=gi:4506712 /UG=Hs.3297 ribosomal protein S27a /FL=gb:BC001392.1 gb:BC005328.1 gb:NM_002954.1 </td> <td> NM_002954 </td> <td> ribosomal protein S27a </td> <td> RPS27A </td> <td> 6233 </td> <td> NM_001135592 /// NM_001177413 /// NM_002954 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005978 // glycogen biosynthetic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007144 // female meiosis I // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008585 // female gonad development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010992 // ubiquitin homeostasis // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019068 // virion assembly // traceable author statement /// 0019082 // viral protein processing // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0021888 // hypothalamus gonadotrophin-releasing hormone neuron development // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0032479 // regulation of type I interferon production // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034146 // toll-like receptor 5 signaling pathway // traceable author statement /// 0034162 // toll-like receptor 9 signaling pathway // traceable author statement /// 0034166 // toll-like receptor 10 signaling pathway // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038123 // toll-like receptor TLR1:TLR2 signaling pathway // traceable author statement /// 0038124 // toll-like receptor TLR6:TLR2 signaling pathway // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060613 // fat pad development // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0071456 // cellular response to hypoxia // traceable author statement /// 0072520 // seminiferous tubule development // inferred from electronic annotation /// 0075733 // intracellular transport of virus // traceable author statement /// 0097009 // energy homeostasis // inferred from electronic annotation /// 0097190 // apoptotic signaling pathway // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // inferred from direct assay /// 0005515 // protein binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 64.25 </td> <td> 2318.32 </td> <td> 0.27 </td> <td> 0.79 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 204418_x_at </td> <td> 204418_x_at </td> <td> NM_000848 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000848.1 /DEF=Homo sapiens glutathione S-transferase M2 (muscle) (GSTM2), mRNA. /FEA=mRNA /GEN=GSTM2 /PROD=glutathione S-transferase M2 (muscle) /DB_XREF=gi:4504174 /UG=Hs.279837 glutathione S-transferase M2 (muscle) /FL=gb:M63509.1 gb:NM_000848.1 </td> <td> NM_000848 </td> <td> glutathione S-transferase mu 2 (muscle) </td> <td> GSTM2 </td> <td> 2946 </td> <td> NM_000848 /// NM_001142368 </td> <td> 0006749 // glutathione metabolic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010880 // regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum // inferred from direct assay /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred by curator /// 0014809 // regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion // inferred by curator /// 0018916 // nitrobenzene metabolic process // inferred from direct assay /// 0042178 // xenobiotic catabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0055119 // relaxation of cardiac muscle // traceable author statement /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0060316 // positive regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0070458 // cellular detoxification of nitrogen compound // inferred from direct assay /// 0071313 // cellular response to caffeine // inferred from direct assay /// 1901687 // glutathione derivative biosynthetic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004364 // glutathione transferase activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043295 // glutathione binding // inferred from direct assay </td> <td> 4.55 </td> <td> 131.78 </td> <td> 0.27 </td> <td> 0.79 </td> <td> 0.83 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201190_s_at </td> <td> 201190_s_at </td> <td> H15647 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:H15647 /FEA=EST /DB_XREF=gi:880467 /DB_XREF=est:ym27b09.s1 /CLONE=IMAGE:49287 /UG=Hs.79709 phosphotidylinositol transfer protein /FL=gb:D30036.1 gb:M73704.1 gb:NM_006224.1 </td> <td> H15647 </td> <td> phosphatidylinositol transfer protein, alpha </td> <td> PITPNA </td> <td> 5306 </td> <td> NM_006224 </td> <td> 0006629 // lipid metabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0015914 // phospholipid transport // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0008525 // phosphatidylcholine transporter activity // traceable author statement /// 0008526 // phosphatidylinositol transporter activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0070540 // stearic acid binding // inferred from electronic annotation </td> <td> 10.32 </td> <td> 295.84 </td> <td> 0.27 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217892_s_at </td> <td> 217892_s_at </td> <td> NM_016357 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016357.1 /DEF=Homo sapiens epithelial protein lost in neoplasm beta (EPLIN), mRNA.  /FEA=mRNA /GEN=EPLIN /PROD=epithelial protein lost in neoplasm beta /DB_XREF=gi:7705372 /UG=Hs.10706 epithelial protein lost in neoplasm beta /FL=gb:AL136911.1 gb:BC001247.1 gb:AF198454.1 gb:NM_016357.1 </td> <td> NM_016357 </td> <td> LIM domain and actin binding 1 </td> <td> LIMA1 </td> <td> 51474 </td> <td> NM_001113546 /// NM_001113547 /// NM_001243775 /// NM_016357 </td> <td> 0030835 // negative regulation of actin filament depolymerization // inferred from direct assay /// 0031529 // ruffle organization // inferred from direct assay /// 0051017 // actin filament bundle assembly // inferred from direct assay </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay </td> <td> 17.98 </td> <td> 569.51 </td> <td> 0.27 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 213028_at </td> <td> 213028_at </td> <td> AI887378 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI887378 /FEA=EST /DB_XREF=gi:5592542 /DB_XREF=est:wm39f04.x1 /CLONE=IMAGE:2438335 /UG=Hs.282441 nuclear factor related to kappa B binding protein </td> <td> AI887378 </td> <td> nuclear factor related to kappaB binding protein </td> <td> NFRKB </td> <td> 4798 </td> <td> NM_001143835 /// NM_006165 /// XM_005271565 /// XM_005271566 /// XM_005271567 /// XM_005271568 /// XM_005271569 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0031011 // Ino80 complex // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 4.07 </td> <td> 55.04 </td> <td> 0.27 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211531_x_at </td> <td> 211531_x_at </td> <td> K03205 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:K03205.1 /DEF=Human PRB1 locus salivary proline-rich protein mRNA, clone cP4, complete cds.  /FEA=mRNA /GEN=PRB1 /DB_XREF=gi:190503 /UG=Hs.73953 proline-rich protein BstNI subfamily 2 /FL=gb:K03205.1 </td> <td> K03205 </td> <td> proline-rich protein BstNI subfamily 1 </td> <td> PRB1 </td> <td> 5542 </td> <td> NM_005039 /// NM_199353 /// NM_199354 </td> <td>  </td> <td> 0005576 // extracellular region // inferred from electronic annotation </td> <td>  </td> <td> -4.15 </td> <td> 51.33 </td> <td> -0.27 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 206592_s_at </td> <td> 206592_s_at </td> <td> NM_003938 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003938.1 /DEF=Homo sapiens adaptor-related protein complex 3, delta 1 subunit (AP3D1), mRNA.  /FEA=mRNA /GEN=AP3D1 /PROD=adaptor-related protein complex 3, delta 1subunit /DB_XREF=gi:4501976 /UG=Hs.75056 adaptor-related protein complex 3, delta 1 subunit /FL=gb:U91930.1 gb:NM_003938.1 </td> <td> NM_003938 </td> <td> adaptor-related protein complex 3, delta 1 subunit </td> <td> AP3D1 </td> <td> 8943 </td> <td> NM_001077523 /// NM_001261826 /// NM_003938 /// XM_006722932 </td> <td> 0006726 // eye pigment biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0008089 // anterograde axon cargo transport // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032438 // melanosome organization // inferred by curator /// 0033365 // protein localization to organelle // inferred from electronic annotation /// 0035646 // endosome to melanosome transport // inferred from mutant phenotype /// 0048007 // antigen processing and presentation, exogenous lipid antigen via MHC class Ib // inferred from electronic annotation /// 0048490 // anterograde synaptic vesicle transport // inferred from sequence or structural similarity /// 0048499 // synaptic vesicle membrane organization // inferred from electronic annotation /// 0051138 // positive regulation of NK T cell differentiation // inferred from electronic annotation /// 0061088 // regulation of sequestering of zinc ion // inferred from mutant phenotype /// 0072657 // protein localization to membrane // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005794 // Golgi apparatus // traceable author statement /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043195 // terminal bouton // inferred from electronic annotation </td> <td> 0005215 // transporter activity // traceable author statement /// 0005488 // binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> 11.28 </td> <td> 431.39 </td> <td> 0.27 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218595_s_at </td> <td> 218595_s_at </td> <td> NM_018072 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018072.1 /DEF=Homo sapiens hypothetical protein FLJ10359 (FLJ10359), mRNA. /FEA=mRNA /GEN=FLJ10359 /PROD=hypothetical protein FLJ10359 /DB_XREF=gi:8922377 /UG=Hs.285861 hypothetical protein FLJ10359 /FL=gb:NM_018072.1 </td> <td> NM_018072 </td> <td> HEAT repeat containing 1 </td> <td> HEATR1 </td> <td> 55127 </td> <td> NM_018072 /// XR_426917 </td> <td> 0006364 // rRNA processing // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -6.40 </td> <td> 271.73 </td> <td> -0.27 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202592_at </td> <td> 202592_at </td> <td> NM_001487 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001487.1 /DEF=Homo sapiens GCN5 (general control of amino-acid synthesis, yeast, homolog)-like 1 (GCN5L1), mRNA.  /FEA=mRNA /GEN=GCN5L1 /PROD=GCN5 (general control of amino-acid synthesis,yeast, homolog)-like 1 /DB_XREF=gi:4503954 /UG=Hs.94672 GCN5 (general control of amino-acid synthesis, yeast, homolog)-like 1 /FL=gb:D64007.1 gb:NM_001487.1 </td> <td> NM_001487 </td> <td> biogenesis of lysosomal organelles complex-1, subunit 1 </td> <td> BLOC1S1 </td> <td> 2647 </td> <td> NM_001487 /// NR_037655 /// NR_037656 /// NR_037657 </td> <td> 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0008089 // anterograde axon cargo transport // inferred from sequence or structural similarity /// 0009060 // aerobic respiration // inferred from mutant phenotype /// 0018394 // peptidyl-lysine acetylation // inferred from mutant phenotype /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0032438 // melanosome organization // non-traceable author statement /// 0048490 // anterograde synaptic vesicle transport // inferred from sequence or structural similarity /// 0060155 // platelet dense granule organization // non-traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005765 // lysosomal membrane // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0031083 // BLOC-1 complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 4.10 </td> <td> 165.55 </td> <td> 0.27 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208757_at </td> <td> 208757_at </td> <td> BC001123 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001123.1 /DEF=Homo sapiens, Similar to gp25L2 protein, clone MGC:2142, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to gp25L2 protein /DB_XREF=gi:12654574 /UG=Hs.279929 gp25L2 protein /FL=gb:BC001123.1 </td> <td> BC001123 </td> <td> transmembrane emp24 protein transport domain containing 9 </td> <td> TMED9 </td> <td> 54732 </td> <td> NM_017510 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0010638 // positive regulation of organelle organization // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032527 // protein exit from endoplasmic reticulum // inferred from mutant phenotype /// 0034498 // early endosome to Golgi transport // inferred from mutant phenotype /// 0048205 // COPI coating of Golgi vesicle // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from mutant phenotype /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030140 // trans-Golgi network transport vesicle // traceable author statement /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from physical interaction </td> <td> -17.00 </td> <td> 388.38 </td> <td> -0.26 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 396_f_at </td> <td> 396_f_at </td> <td> X97671 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> Affymetrix Proprietary Database </td> <td> X97671 /FEATURE=cds /DEFINITION=HSERYTHR H.sapiens mRNA for erythropoietin receptor </td> <td> X97671 </td> <td> erythropoietin receptor </td> <td> EPOR </td> <td> 2057 </td> <td> NM_000121 /// NR_033663 </td> <td> 0007165 // signal transduction // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0038162 // erythropoietin-mediated signaling pathway // inferred from direct assay /// 0038162 // erythropoietin-mediated signaling pathway // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004900 // erythropoietin receptor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction </td> <td> 10.23 </td> <td> 388.79 </td> <td> 0.26 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 207988_s_at </td> <td> 207988_s_at </td> <td> NM_005731 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005731.1 /DEF=Homo sapiens actin related protein 23 complex, subunit 2 (34 kD) (ARPC2), mRNA.  /FEA=mRNA /GEN=ARPC2 /PROD=actin related protein 23 complex, subunit 2 (34kD) /DB_XREF=gi:5031598 /UG=Hs.83583 actin related protein 23 complex, subunit 2 (34 kD) /FL=gb:AF006085.1 gb:NM_005731.1 </td> <td> NM_005731 </td> <td> actin related protein 2/3 complex, subunit 2, 34kDa </td> <td> ARPC2 </td> <td> 10109 </td> <td> NM_005731 /// NM_152862 /// XM_006712173 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0010592 // positive regulation of lamellipodium assembly // inferred from mutant phenotype /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 1900026 // positive regulation of substrate adhesion-dependent cell spreading // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from electronic annotation /// 0035650 // AP-1 adaptor complex binding // inferred from electronic annotation /// 0071933 // Arp2/3 complex binding // inferred from electronic annotation </td> <td> -14.55 </td> <td> 863.60 </td> <td> -0.26 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201644_at </td> <td> 201644_at </td> <td> NM_003313 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003313.2 /DEF=Homo sapiens tissue specific transplantation antigen P35B (TSTA3), mRNA.  /FEA=mRNA /GEN=TSTA3 /PROD=tissue specific transplantation antigen P35B /DB_XREF=gi:6598326 /UG=Hs.264428 tissue specific transplantation antigen P35B /FL=gb:BC001941.1 gb:U58766.1 gb:NM_003313.2 </td> <td> NM_003313 </td> <td> tissue specific transplantation antigen P35B </td> <td> TSTA3 </td> <td> 7264 </td> <td> NM_003313 /// XM_005251050 /// XM_005251051 /// XM_005251052 /// XM_006725093 /// XM_006725094 </td> <td> 0007159 // leukocyte cell-cell adhesion // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0019673 // GDP-mannose metabolic process // inferred from direct assay /// 0019835 // cytolysis // inferred from electronic annotation /// 0042351 // 'de novo' GDP-L-fucose biosynthetic process // inferred from direct assay /// 0042351 // 'de novo' GDP-L-fucose biosynthetic process // inferred from electronic annotation /// 0042351 // 'de novo' GDP-L-fucose biosynthetic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0045226 // extracellular polysaccharide biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred by curator /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0008831 // dTDP-4-dehydrorhamnose reductase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042356 // GDP-4-dehydro-D-rhamnose reductase activity // traceable author statement /// 0050577 // GDP-L-fucose synthase activity // inferred from direct assay /// 0050662 // coenzyme binding // inferred from electronic annotation </td> <td> -4.60 </td> <td> 117.22 </td> <td> -0.26 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 215399_s_at </td> <td> 215399_s_at </td> <td> AI683900 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI683900 /FEA=EST /DB_XREF=gi:4894082 /DB_XREF=est:tw54e04.x1 /CLONE=IMAGE:2263518 /UG=Hs.76228 amplified in osteosarcoma </td> <td> AI683900 </td> <td> osteosarcoma amplified 9, endoplasmic reticulum lectin </td> <td> OS9 </td> <td> 10956 </td> <td> NM_001017956 /// NM_001017957 /// NM_001017958 /// NM_001261420 /// NM_001261421 /// NM_001261422 /// NM_001261423 /// NM_006812 /// XM_005268581 /// XM_006719200 /// XM_006719201 </td> <td> 0006605 // protein targeting // inferred from electronic annotation /// 0006621 // protein retention in ER lumen // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0030433 // ER-associated ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0034976 // response to endoplasmic reticulum stress // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from mutant phenotype </td> <td> 0000836 // Hrd1p ubiquitin ligase complex // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay </td> <td> 0001948 // glycoprotein binding // inferred from direct assay /// 0002020 // protease binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -6.60 </td> <td> 169.10 </td> <td> -0.26 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 78047_s_at </td> <td> 78047_s_at </td> <td> AW001777 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AW001777:ws04f09.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2496233 /clone_end=3' /gb=AW001777 /gi=5848693 /ug=Hs.233641 /len=485 </td> <td> AW001777 </td> <td> MMP24 antisense RNA 1 </td> <td> MMP24-AS1 </td> <td> 101410538 </td> <td> NR_102705 /// NR_102706 </td> <td>  </td> <td>  </td> <td>  </td> <td> -6.70 </td> <td> 222.12 </td> <td> -0.26 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202668_at </td> <td> 202668_at </td> <td> BF001670 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF001670 /FEA=EST /DB_XREF=gi:10701945 /DB_XREF=est:7g91e06.x1 /CLONE=IMAGE:3313858 /UG=Hs.30942 ephrin-B2 /FL=gb:U81262.1 gb:NM_004093.1 gb:L38734.1 gb:U16797.1 </td> <td> BF001670 </td> <td> ephrin-B2 </td> <td> EFNB2 </td> <td> 1948 </td> <td> NM_004093 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0007155 // cell adhesion // inferred from direct assay /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // not recorded /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010839 // negative regulation of keratinocyte proliferation // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050920 // regulation of chemotaxis // inferred from direct assay /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from sequence or structural similarity </td> <td> 0005886 // plasma membrane // not recorded /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from physical interaction </td> <td> -9.35 </td> <td> 295.10 </td> <td> -0.26 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 219939_s_at </td> <td> 219939_s_at </td> <td> NM_007158 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_007158.1 /DEF=Homo sapiens NRAS-related gene (D1S155E), mRNA. /FEA=mRNA /GEN=D1S155E /PROD=NRAS-related gene /DB_XREF=gi:6005738 /UG=Hs.69855 NRAS-related gene /FL=gb:AF077054.1 gb:NM_007158.1 </td> <td> NM_007158 </td> <td> cold shock domain containing E1, RNA-binding </td> <td> CSDE1 </td> <td> 7812 </td> <td> NM_001007553 /// NM_001130523 /// NM_001242891 /// NM_001242892 /// NM_001242893 /// NM_007158 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0008584 // male gonad development // traceable author statement /// 0070966 // nuclear-transcribed mRNA catabolic process, no-go decay // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -7.50 </td> <td> 622.30 </td> <td> -0.26 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212387_at </td> <td> 212387_at </td> <td> BG495771 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG495771 /FEA=EST /DB_XREF=gi:13457287 /DB_XREF=est:602540396F1 /CLONE=IMAGE:4671599 /UG=Hs.289068 Homo sapiens cDNA FLJ11918 fis, clone HEMBB1000272 </td> <td> BG495771 </td> <td> transcription factor 4 </td> <td> TCF4 </td> <td> 6925 </td> <td> NM_001083962 /// NM_001243226 /// NM_001243227 /// NM_001243228 /// NM_001243230 /// NM_001243231 /// NM_001243232 /// NM_001243233 /// NM_001243234 /// NM_001243235 /// NM_001243236 /// NM_003199 /// XM_005266739 /// XM_005266741 /// XM_005266743 /// XM_005266744 /// XM_005266745 /// XM_005266746 /// XM_005266747 /// XM_005266749 /// XM_005266750 /// XM_005266752 /// XM_005266754 /// XM_005266755 /// XM_005266761 /// XM_006722529 /// XM_006722530 /// XM_006722531 /// XM_006722532 /// XM_006722533 /// XM_006722534 /// XM_006722535 /// XM_006722536 /// XM_006722537 /// XM_006722538 /// XM_006722539 /// XM_006722540 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006352 // DNA-templated transcription, initiation // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005667 // transcription factor complex // inferred from sequence or structural similarity </td> <td> 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from sequence or structural similarity </td> <td> -20.75 </td> <td> 544.17 </td> <td> -0.26 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 214041_x_at </td> <td> 214041_x_at </td> <td> BE857772 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE857772 /FEA=EST /DB_XREF=gi:10372131 /DB_XREF=est:7d62a11.x1 /CLONE=IMAGE:3251804 /UG=Hs.5566 ribosomal protein L37a </td> <td> BE857772 </td> <td> ribosomal protein L37a </td> <td> RPL37A </td> <td> 6168 </td> <td> NM_000998 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003735 // structural constituent of ribosome // non-traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 13.85 </td> <td> 204.18 </td> <td> 0.26 </td> <td> 0.80 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210317_s_at </td> <td> 210317_s_at </td> <td> U28936 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U28936.1 /DEF=Human epsilon 14-3-3 protein mRNA, complete cds. /FEA=mRNA /PROD=epsilon 14-3-3 protein /DB_XREF=gi:984318 /UG=Hs.79474 tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, epsilon polypeptide /FL=gb:U28936.1 </td> <td> U28936 </td> <td> tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon </td> <td> YWHAE </td> <td> 7531 </td> <td> NM_006761 /// NR_024058 /// XM_005256784 /// XM_006725298 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0003064 // regulation of heart rate by hormone // non-traceable author statement /// 0006605 // protein targeting // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0035308 // negative regulation of protein dephosphorylation // inferred from electronic annotation /// 0035329 // hippo signaling // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0043281 // regulation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0060306 // regulation of membrane repolarization // inferred from direct assay /// 0061024 // membrane organization // traceable author statement /// 0086013 // membrane repolarization during cardiac muscle cell action potential // inferred by curator /// 0086091 // regulation of heart rate by cardiac conduction // inferred by curator /// 0097190 // apoptotic signaling pathway // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement /// 1901016 // regulation of potassium ion transmembrane transporter activity // inferred from direct assay /// 1902309 // negative regulation of peptidyl-serine dephosphorylation // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005871 // kinesin complex // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0023026 // MHC class II protein complex binding // inferred from direct assay /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0044325 // ion channel binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0050815 // phosphoserine binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from physical interaction </td> <td> 19.70 </td> <td> 384.38 </td> <td> 0.26 </td> <td> 0.81 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212438_at </td> <td> 212438_at </td> <td> BG252325 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG252325 /FEA=EST /DB_XREF=gi:12762141 /DB_XREF=est:602365913F1 /CLONE=IMAGE:4474082 /UG=Hs.54649 putative nucleic acid binding protein RY-1 </td> <td> BG252325 </td> <td> small nuclear ribonucleoprotein 27kDa (U4/U6.U5) </td> <td> SNRNP27 </td> <td> 11017 </td> <td> NM_006857 /// NR_037862 </td> <td> 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> -7.55 </td> <td> 158.68 </td> <td> -0.26 </td> <td> 0.81 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200630_x_at </td> <td> 200630_x_at </td> <td> AV702810 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AV702810 /FEA=EST /DB_XREF=gi:10719140 /DB_XREF=est:AV702810 /CLONE=ADBDGH01 /UG=Hs.145279 SET translocation (myeloid leukemia-associated) /FL=gb:U51924.1 gb:M93651.1 gb:NM_003011.1 </td> <td> AV702810 </td> <td> SET nuclear proto-oncogene /// SET-like protein </td> <td> SET /// SETSIP </td> <td> 6418 /// 646817 </td> <td> NM_001122821 /// NM_001248000 /// NM_001248001 /// NM_001287737 /// NM_003011 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006337 // nucleosome disassembly // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0035067 // negative regulation of histone acetylation // traceable author statement /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0045446 // endothelial cell differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050790 // regulation of catalytic activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004864 // protein phosphatase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0042393 // histone binding // traceable author statement </td> <td> -32.52 </td> <td> 822.71 </td> <td> -0.25 </td> <td> 0.81 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200647_x_at </td> <td> 200647_x_at </td> <td> NM_003752 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003752.2 /DEF=Homo sapiens eukaryotic translation initiation factor 3, subunit 8 (110kD) (EIF3S8), mRNA.  /FEA=mRNA /GEN=EIF3S8 /PROD=eukaryotic translation initiation factor 3,subunit 8 (110kD) /DB_XREF=gi:5579457 /UG=Hs.4835 eukaryotic translation initiation factor 3, subunit 8 (110kD) /FL=gb:NM_003752.2 </td> <td> NM_003752 </td> <td> eukaryotic translation initiation factor 3, subunit C /// eukaryotic translation initiation factor 3, subunit C-like </td> <td> EIF3C /// EIF3CL </td> <td> 8663 /// 728689 </td> <td> NM_001037808 /// NM_001099661 /// NM_001199142 /// NM_001267574 /// NM_001286478 /// NM_003752 /// XM_005255535 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from electronic annotation /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031369 // translation initiation factor binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -32.27 </td> <td> 1022.79 </td> <td> -0.25 </td> <td> 0.81 </td> <td> 0.84 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201386_s_at </td> <td> 201386_s_at </td> <td> AF279891 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF279891.1 /DEF=Homo sapiens dead box protein 15 mRNA, complete cds. /FEA=mRNA /PROD=dead box protein 15 /DB_XREF=gi:9624452 /UG=Hs.5683 DEADH (Asp-Glu-Ala-AspHis) box polypeptide 15 /FL=gb:AB001636.1 gb:NM_001358.1 gb:AF279891.1 </td> <td> AF279891 </td> <td> DEAH (Asp-Glu-Ala-His) box helicase 15 </td> <td> DHX15 </td> <td> 1665 </td> <td> NM_001358 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // inferred by curator </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0071008 // U2-type post-mRNA release spliceosomal complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -10.70 </td> <td> 550.55 </td> <td> -0.25 </td> <td> 0.81 </td> <td> 0.85 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212293_at </td> <td> 212293_at </td> <td> BG111260 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG111260 /FEA=EST /DB_XREF=gi:12604766 /DB_XREF=est:602281701F1 /CLONE=IMAGE:4369057 /UG=Hs.12259 KIAA0630 protein </td> <td> BG111260 </td> <td> homeodomain interacting protein kinase 1 </td> <td> HIPK1 </td> <td> 204851 </td> <td> NM_152696 /// NM_181358 /// NM_198268 /// NM_198269 /// XM_005270609 /// XM_005270610 /// XM_005270611 /// XM_005270612 /// XM_005270613 /// XM_006710443 </td> <td> 0001654 // eye development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010803 // regulation of tumor necrosis factor-mediated signaling pathway // inferred from direct assay /// 0010842 // retina layer formation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016926 // protein desumoylation // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0042771 // intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0060059 // embryonic retina morphogenesis in camera-type eye // inferred from electronic annotation /// 0060216 // definitive hemopoiesis // inferred from sequence or structural similarity /// 0060235 // lens induction in camera-type eye // inferred from electronic annotation /// 0061072 // iris morphogenesis // inferred from electronic annotation /// 0072577 // endothelial cell apoptotic process // inferred from direct assay /// 0097191 // extrinsic apoptotic signaling pathway // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> -4.47 </td> <td> 218.54 </td> <td> -0.25 </td> <td> 0.81 </td> <td> 0.85 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211926_s_at </td> <td> 211926_s_at </td> <td> AI827941 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI827941 /FEA=EST /DB_XREF=gi:5448699 /DB_XREF=est:wk31a02.x1 /CLONE=IMAGE:2413898 /UG=Hs.146550 myosin, heavy polypeptide 9, non-muscle /FL=gb:NM_002473.1 </td> <td> AI827941 </td> <td> myosin, heavy chain 9, non-muscle </td> <td> MYH9 </td> <td> 4627 </td> <td> NM_002473 </td> <td> 0000212 // meiotic spindle organization // inferred from electronic annotation /// 0000904 // cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0001525 // angiogenesis // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001768 // establishment of T cell polarity // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007520 // myoblast fusion // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0015031 // protein transport // inferred from mutant phenotype /// 0016337 // single organismal cell-cell adhesion // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from direct assay /// 0030220 // platelet formation // inferred from mutant phenotype /// 0030224 // monocyte differentiation // inferred from expression pattern /// 0031032 // actomyosin structure organization // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0032796 // uropod organization // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043534 // blood vessel endothelial cell migration // inferred from mutant phenotype /// 0050900 // leukocyte migration // non-traceable author statement /// 0051295 // establishment of meiotic spindle localization // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from direct assay /// 0001726 // ruffle // inferred from direct assay /// 0001772 // immunological synapse // inferred from direct assay /// 0001931 // uropod // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005826 // actomyosin contractile ring // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0008180 // COP9 signalosome // inferred from direct assay /// 0008305 // integrin complex // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016460 // myosin II complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0042641 // actomyosin // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0097513 // myosin II filament // inferred from direct assay </td> <td> 0000146 // microfilament motor activity // inferred from direct assay /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003774 // motor activity // non-traceable author statement /// 0003779 // actin binding // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0016887 // ATPase activity // inferred from direct assay /// 0030898 // actin-dependent ATPase activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043495 // protein anchor // inferred from mutant phenotype /// 0043531 // ADP binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // non-traceable author statement </td> <td> -18.42 </td> <td> 1033.59 </td> <td> -0.25 </td> <td> 0.81 </td> <td> 0.85 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218515_at </td> <td> 218515_at </td> <td> NM_016631 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016631.1 /DEF=Homo sapiens hypothetical protein (LOC51325), mRNA. /FEA=mRNA /GEN=LOC51325 /PROD=hypothetical protein /DB_XREF=gi:7706175 /UG=Hs.26461 hypothetical protein /FL=gb:AF208862.1 gb:NM_016631.1 </td> <td> NM_016631 </td> <td> PAX3 and PAX7 binding protein 1 </td> <td> PAXBP1 </td> <td> 94104 </td> <td> NM_013329 /// NM_016631 /// NM_058191 /// NM_145328 /// NR_027873 /// XM_006724066 /// XM_006724067 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0007517 // muscle organ development // inferred from electronic annotation /// 0014842 // regulation of satellite cell proliferation // inferred from electronic annotation /// 0031062 // positive regulation of histone methylation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 2000288 // positive regulation of myoblast proliferation // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation </td> <td> 4.00 </td> <td> 104.95 </td> <td> 0.25 </td> <td> 0.81 </td> <td> 0.85 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209896_s_at </td> <td> 209896_s_at </td> <td> AF119855 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF119855.1 /DEF=Homo sapiens PRO1847 mRNA, complete cds. /FEA=mRNA /PROD=PRO1847 /DB_XREF=gi:7770146 /UG=Hs.285196 hypothetical protein PRO1847 /FL=gb:AF119855.1 </td> <td> AF119855 </td> <td> protein tyrosine phosphatase, non-receptor type 11 </td> <td> PTPN11 </td> <td> 5781 </td> <td> NM_002834 /// NM_080601 /// XM_006719526 /// XM_006719527 </td> <td> 0000077 // DNA damage checkpoint // inferred from electronic annotation /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from mutant phenotype /// 0007507 // heart development // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009755 // hormone-mediated signaling pathway // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from mutant phenotype /// 0035265 // organ growth // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from mutant phenotype /// 0036302 // atrioventricular canal development // inferred from mutant phenotype /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0038127 // ERBB signaling pathway // inferred from direct assay /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0046825 // regulation of protein export from nucleus // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0046888 // negative regulation of hormone secretion // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048609 // multicellular organismal reproductive process // inferred from electronic annotation /// 0048806 // genitalia development // inferred from mutant phenotype /// 0048839 // inner ear development // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0051463 // negative regulation of cortisol secretion // inferred from electronic annotation /// 0060125 // negative regulation of growth hormone secretion // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from mutant phenotype /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement /// 2001275 // positive regulation of glucose import in response to insulin stimulus // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // inferred from mutant phenotype /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // traceable author statement /// 0005070 // SH3/SH2 adaptor activity // inferred from direct assay /// 0005158 // insulin receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation /// 0031748 // D1 dopamine receptor binding // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation /// 0051428 // peptide hormone receptor binding // inferred from electronic annotation </td> <td> -9.82 </td> <td> 297.04 </td> <td> -0.25 </td> <td> 0.81 </td> <td> 0.85 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202888_s_at </td> <td> 202888_s_at </td> <td> NM_001150 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001150.1 /DEF=Homo sapiens alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150) (ANPEP), mRNA.  /FEA=mRNA /GEN=ANPEP /PROD=membrane alanine aminopeptidase precursor /DB_XREF=gi:4502094 /UG=Hs.1239 alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150) /FL=gb:M22324.1 gb:NM_001150.1 </td> <td> NM_001150 </td> <td> alanyl (membrane) aminopeptidase </td> <td> ANPEP </td> <td> 290 </td> <td> NM_001150 /// XM_005254892 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0002003 // angiotensin maturation // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from electronic annotation /// 0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -8.48 </td> <td> 252.49 </td> <td> -0.25 </td> <td> 0.81 </td> <td> 0.85 </td> <td> -4.62 </td> </tr>
  <tr> <td> 221711_s_at </td> <td> 221711_s_at </td> <td> BC006244 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006244.1 /DEF=Homo sapiens, HSPC142 protein, clone MGC:11295, mRNA, complete cds. /FEA=mRNA /PROD=HSPC142 protein /DB_XREF=gi:13623286 /FL=gb:BC006244.1 </td> <td> BC006244 </td> <td> BRISC and BRCA1 A complex member 1 </td> <td> BABAM1 </td> <td> 29086 </td> <td> NM_001033549 /// NM_001288756 /// NM_001288757 /// NM_014173 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from mutant phenotype /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0031572 // G2 DNA damage checkpoint // inferred from mutant phenotype /// 0045739 // positive regulation of DNA repair // inferred from mutant phenotype /// 0070536 // protein K63-linked deubiquitination // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0070531 // BRCA1-A complex // inferred from direct assay /// 0070552 // BRISC complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 4.87 </td> <td> 155.74 </td> <td> 0.25 </td> <td> 0.81 </td> <td> 0.85 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203216_s_at </td> <td> 203216_s_at </td> <td> NM_004999 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004999.1 /DEF=Homo sapiens myosin VI (MYO6), mRNA. /FEA=mRNA /GEN=MYO6 /PROD=myosin VI /DB_XREF=gi:4826845 /UG=Hs.22564 myosin VI /FL=gb:AB002387.1 gb:NM_004999.1 </td> <td> NM_004999 </td> <td> myosin VI </td> <td> MYO6 </td> <td> 4646 </td> <td> NM_004999 /// XM_005248719 /// XM_005248720 /// XM_005248721 /// XM_005248722 /// XM_005248724 /// XM_005248725 /// XM_005248726 </td> <td> 0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0007268 // synaptic transmission // traceable author statement /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from sequence or structural similarity /// 0008152 // metabolic process // non-traceable author statement /// 0014047 // glutamate secretion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0030048 // actin filament-based movement // non-traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051046 // regulation of secretion // inferred from mutant phenotype /// 0061024 // membrane organization // traceable author statement /// 0071257 // cellular response to electrical stimulus // inferred from electronic annotation </td> <td> 0001726 // ruffle // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030665 // clathrin-coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0031941 // filamentous actin // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from sequence or structural similarity /// 0003779 // actin binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from sequence or structural similarity /// 0005516 // calmodulin binding // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from sequence or structural similarity /// 0060001 // minus-end directed microfilament motor activity // non-traceable author statement </td> <td> 9.40 </td> <td> 227.88 </td> <td> 0.25 </td> <td> 0.81 </td> <td> 0.85 </td> <td> -4.62 </td> </tr>
  <tr> <td> 219193_at </td> <td> 219193_at </td> <td> NM_018034 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018034.1 /DEF=Homo sapiens hypothetical protein FLJ10233 (FLJ10233), mRNA. /FEA=mRNA /GEN=FLJ10233 /PROD=hypothetical protein FLJ10233 /DB_XREF=gi:8922300 /UG=Hs.16079 hypothetical protein FLJ10233 /FL=gb:NM_018034.1 </td> <td> NM_018034 </td> <td> WD repeat domain 70 </td> <td> WDR70 </td> <td> 55100 </td> <td> NM_018034 /// XM_005248318 /// XM_006714478 </td> <td>  </td> <td>  </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction </td> <td> -4.50 </td> <td> 75.22 </td> <td> -0.24 </td> <td> 0.81 </td> <td> 0.85 </td> <td> -4.62 </td> </tr>
  <tr> <td> 214736_s_at </td> <td> 214736_s_at </td> <td> BE898639 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE898639 /FEA=EST /DB_XREF=gi:10365322 /DB_XREF=est:601681587F1 /CLONE=IMAGE:3951933 /UG=Hs.183706 adducin 1 (alpha) </td> <td> BE898639 </td> <td> adducin 1 (alpha) </td> <td> ADD1 </td> <td> 118 </td> <td> NM_001119 /// NM_001286645 /// NM_014189 /// NM_014190 /// NM_176801 /// XM_005247933 /// XM_005247934 /// XM_005247935 /// XM_005247936 /// XM_005247937 </td> <td> 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006884 // cell volume homeostasis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007010 // cytoskeleton organization // non-traceable author statement /// 0020027 // hemoglobin metabolic process // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred by curator /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030837 // negative regulation of actin filament polymerization // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0051016 // barbed-end actin filament capping // inferred from direct assay /// 0051017 // actin filament bundle assembly // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // non-traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0008290 // F-actin capping protein complex // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0003779 // actin binding // traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0030507 // spectrin binding // inferred from direct assay /// 0042608 // T cell receptor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0051015 // actin filament binding // inferred from direct assay </td> <td> -5.65 </td> <td> 354.18 </td> <td> -0.24 </td> <td> 0.82 </td> <td> 0.85 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201955_at </td> <td> 201955_at </td> <td> AL137784 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL137784 /DEF=Human DNA sequence from clone RP1-199J3 on chromosome 6 Contains ESTs, STSs, GSSs and CpG islands. Contains part of the gene for a novel protein similar to ubiquitin carboxyl-terminal hudrolase 16 (EC 3.1.2.15), a novel gene, the CCNC gene encodin... /FEA=mRNA /DB_XREF=gi:9863487 /UG=Hs.118442 cyclin C /FL=gb:NM_005190.2 </td> <td> AL137784 </td> <td> cyclin C </td> <td> CCNC </td> <td> 892 </td> <td> NM_001013399 /// NM_005190 /// XM_005267202 /// XM_006715594 </td> <td> 0000079 // regulation of cyclin-dependent protein serine/threonine kinase activity // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // traceable author statement /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from electronic annotation /// 0016592 // mediator complex // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation </td> <td> 6.30 </td> <td> 408.43 </td> <td> 0.24 </td> <td> 0.82 </td> <td> 0.85 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201586_s_at </td> <td> 201586_s_at </td> <td> NM_005066 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005066.1 /DEF=Homo sapiens splicing factor prolineglutamine rich (polypyrimidine tract-binding protein-associated) (SFPQ), mRNA.  /FEA=mRNA /GEN=SFPQ /PROD=splicing factor prolineglutamine rich(polypyrimidine tract-binding protein-associated) /DB_XREF=gi:4826997 /UG=Hs.180610 splicing factor prolineglutamine rich (polypyrimidine tract-binding protein-associated) /FL=gb:NM_005066.1 </td> <td> NM_005066 </td> <td> splicing factor proline/glutamine-rich </td> <td> SFPQ </td> <td> 6421 </td> <td> NM_005066 /// XM_005271111 /// XM_005271112 /// XM_005271113 /// XM_005271115 /// XM_005271116 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000380 // alternative mRNA splicing, via spliceosome // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0042754 // negative regulation of circadian rhythm // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0048511 // rhythmic process // inferred from electronic annotation /// 0070932 // histone H3 deacetylation // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0042382 // paraspeckles // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001047 // core promoter binding // inferred from sequence or structural similarity /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 13.20 </td> <td> 753.80 </td> <td> 0.24 </td> <td> 0.82 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208638_at </td> <td> 208638_at </td> <td> BE910010 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE910010 /FEA=EST /DB_XREF=gi:10406176 /DB_XREF=est:601498050F1 /CLONE=IMAGE:3899869 /UG=Hs.182429 protein disulfide isomerase-related protein /FL=gb:BC001312.1 </td> <td> BE910010 </td> <td> protein disulfide isomerase family A, member 6 </td> <td> PDIA6 </td> <td> 10130 </td> <td> NM_001282704 /// NM_001282705 /// NM_001282706 /// NM_001282707 /// NM_005742 /// XM_005246145 /// XM_006711856 </td> <td> 0006457 // protein folding // not recorded /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0034976 // response to endoplasmic reticulum stress // not recorded /// 0043277 // apoptotic cell clearance // not recorded /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // not recorded /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003756 // protein disulfide isomerase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation </td> <td> -8.57 </td> <td> 685.16 </td> <td> -0.23 </td> <td> 0.82 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 216308_x_at </td> <td> 216308_x_at </td> <td> AK026752 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK026752.1 /DEF=Homo sapiens cDNA: FLJ23099 fis, clone LNG07460, highly similar to AF113251 Homo sapiens putative 2-hydroxyacid dehydrogenase mRNA.  /FEA=mRNA /DB_XREF=gi:10439675 /UG=Hs.155742 glyoxylate reductasehydroxypyruvate reductase </td> <td> AK026752 </td> <td> glyoxylate reductase/hydroxypyruvate reductase </td> <td> GRHPR </td> <td> 9380 </td> <td> NM_012203 /// XM_005251631 </td> <td> 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0007588 // excretion // inferred from mutant phenotype /// 0008152 // metabolic process // non-traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043648 // dicarboxylic acid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046487 // glyoxylate metabolic process // traceable author statement /// 0051259 // protein oligomerization // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005782 // peroxisomal matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004616 // phosphogluconate dehydrogenase (decarboxylating) activity // inferred from electronic annotation /// 0008465 // glycerate dehydrogenase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016618 // hydroxypyruvate reductase activity // inferred from direct assay /// 0030267 // glyoxylate reductase (NADP) activity // inferred from direct assay /// 0030267 // glyoxylate reductase (NADP) activity // non-traceable author statement /// 0031406 // carboxylic acid binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0048037 // cofactor binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation /// 0051287 // NAD binding // traceable author statement /// 0070402 // NADPH binding // inferred from direct assay </td> <td> 5.67 </td> <td> 169.46 </td> <td> 0.23 </td> <td> 0.82 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217918_at </td> <td> 217918_at </td> <td> NM_014183 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014183.1 /DEF=Homo sapiens HSPC162 protein (HSPC162), mRNA. /FEA=mRNA /GEN=HSPC162 /PROD=HSPC162 protein /DB_XREF=gi:7661821 /UG=Hs.100002 HSPC162 protein /FL=gb:BC002481.1 gb:AY026513.1 gb:AF161511.1 gb:NM_014183.1 gb:AF165516.1 </td> <td> NM_014183 </td> <td> dynein, light chain, roadblock-type 1 </td> <td> DYNLRB1 </td> <td> 83658 </td> <td> NM_001281727 /// NM_001281728 /// NM_001281729 /// NM_014183 /// NM_177953 /// NR_104032 /// XM_005260568 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // non-traceable author statement /// 0007632 // visual behavior // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement </td> <td> 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from sequence or structural similarity /// 0005868 // cytoplasmic dynein complex // non-traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030286 // dynein complex // inferred from electronic annotation </td> <td> 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation </td> <td> 12.62 </td> <td> 816.84 </td> <td> 0.23 </td> <td> 0.82 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201621_at </td> <td> 201621_at </td> <td> NM_005380 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005380.1 /DEF=Homo sapiens neuroblastoma, suppression of tumorigenicity 1 (NBL1), mRNA.  /FEA=mRNA /GEN=NBL1 /PROD=neuroblastoma, suppression of tumorigenicity 1 /DB_XREF=gi:4885508 /UG=Hs.76307 neuroblastoma, suppression of tumorigenicity 1 /FL=gb:NM_005380.1 gb:D28124.1 </td> <td> NM_005380 </td> <td> neuroblastoma 1, DAN family BMP antagonist </td> <td> NBL1 </td> <td> 4681 </td> <td> NM_001204084 /// NM_001204085 /// NM_001204086 /// NM_001278164 /// NM_001278165 /// NM_001278166 /// NM_005380 /// NM_182744 </td> <td> 0007399 // nervous system development // inferred from sequence or structural similarity /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0035582 // sequestering of BMP in extracellular matrix // inferred from sequence or structural similarity /// 0038098 // sequestering of BMP from receptor via BMP binding // inferred from direct assay /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0048263 // determination of dorsal identity // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0090027 // negative regulation of monocyte chemotaxis // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred by curator /// 0005739 // mitochondrion //  /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0016015 // morphogen activity // inferred from sequence or structural similarity /// 0036122 // BMP binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from mutant phenotype </td> <td> 5.02 </td> <td> 83.04 </td> <td> 0.23 </td> <td> 0.82 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218384_at </td> <td> 218384_at </td> <td> NM_014316 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014316.1 /DEF=Homo sapiens calcium-regulated heat-stable protein (24kD) (CRHSP-24), mRNA.  /FEA=mRNA /GEN=CRHSP-24 /PROD=calcium-regulated heat-stable protein (24kD) /DB_XREF=gi:7656994 /UG=Hs.92198 calcium-regulated heat-stable protein (24kD) /FL=gb:BC001333.1 gb:BC003366.1 gb:AF115345.1 gb:NM_014316.1 </td> <td> NM_014316 </td> <td> calcium regulated heat stable protein 1, 24kDa </td> <td> CARHSP1 </td> <td> 23589 </td> <td> NM_001042476 /// NM_001278260 /// NM_001278261 /// NM_001278262 /// NM_001278263 /// NM_001278264 /// NM_001278265 /// NM_001278266 /// NM_014316 /// XM_005255228 /// XM_005255229 </td> <td> 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement /// 0043488 // regulation of mRNA stability // inferred from sequence or structural similarity </td> <td> 0000177 // cytoplasmic exosome (RNase complex) // inferred from sequence or structural similarity /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0043186 // P granule // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0019902 // phosphatase binding // non-traceable author statement </td> <td> -5.13 </td> <td> 88.81 </td> <td> -0.23 </td> <td> 0.82 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217854_s_at </td> <td> 217854_s_at </td> <td> NM_002695 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002695.1 /DEF=Homo sapiens polymerase (RNA) II (DNA directed) polypeptide E (25kD) (POLR2E), mRNA.  /FEA=mRNA /GEN=POLR2E /PROD=polymerase (RNA) II (DNA directed) polypeptide E(25kD) /DB_XREF=gi:4505944 /UG=Hs.24301 polymerase (RNA) II (DNA directed) polypeptide E (25kD) /FL=gb:BC004441.1 gb:NM_002695.1 gb:J04965.1 gb:D38251.1 </td> <td> NM_002695 </td> <td> polymerase (RNA) II (DNA directed) polypeptide E, 25kDa </td> <td> POLR2E </td> <td> 5434 </td> <td> NM_002695 /// XM_005259579 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // not recorded /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0005666 // DNA-directed RNA polymerase III complex // not recorded /// 0005736 // DNA-directed RNA polymerase I complex // not recorded /// 0005829 // cytosol // traceable author statement </td> <td> 0001054 // RNA polymerase I activity // not recorded /// 0001055 // RNA polymerase II activity // not recorded /// 0001056 // RNA polymerase III activity // not recorded /// 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction </td> <td> 13.85 </td> <td> 537.98 </td> <td> 0.23 </td> <td> 0.82 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202185_at </td> <td> 202185_at </td> <td> NM_001084 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001084.1 /DEF=Homo sapiens procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 (PLOD3), mRNA.  /FEA=mRNA /GEN=PLOD3 /PROD=procollagen-lysine, 2-oxoglutarate 5-dioxygenase3v /DB_XREF=gi:4505890 /UG=Hs.153357 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 /FL=gb:AF046889.1 gb:AF068229.1 gb:NM_001084.1 </td> <td> NM_001084 </td> <td> procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 </td> <td> PLOD3 </td> <td> 8985 </td> <td> NM_001084 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001886 // endothelial cell morphogenesis // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0042311 // vasodilation // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060425 // lung morphogenesis // inferred from electronic annotation /// 0070831 // basement membrane assembly // inferred from electronic annotation </td> <td> 0005581 // collagen trimer // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030867 // rough endoplasmic reticulum membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008475 // procollagen-lysine 5-dioxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0033823 // procollagen glucosyltransferase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050211 // procollagen galactosyltransferase activity // traceable author statement /// 0051213 // dioxygenase activity // inferred from electronic annotation </td> <td> -11.35 </td> <td> 466.32 </td> <td> -0.23 </td> <td> 0.83 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211277_x_at </td> <td> 211277_x_at </td> <td> BC004369 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC004369.1 /DEF=Homo sapiens, Similar to amyloid beta (A4) precursor protein (protease nexin-II, Alzheimer disease), clone MGC:10403, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to amyloid beta (A4) precursor protein(protease nexin-II, Alzheimer disease) /DB_XREF=gi:13325111 /UG=Hs.177486 amyloid beta (A4) precursor protein (protease nexin-II, Alzheimer disease) /FL=gb:BC004369.1 </td> <td> BC004369 </td> <td> amyloid beta (A4) precursor protein </td> <td> APP </td> <td> 351 </td> <td> NM_000484 /// NM_001136016 /// NM_001136129 /// NM_001136130 /// NM_001136131 /// NM_001204301 /// NM_001204302 /// NM_001204303 /// NM_201413 /// NM_201414 </td> <td> 0000085 // mitotic G2 phase // inferred from sequence or structural similarity /// 0001967 // suckling behavior // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006378 // mRNA polyadenylation // inferred from sequence or structural similarity /// 0006417 // regulation of translation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006508 // proteolysis // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0007617 // mating behavior // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0008088 // axon cargo transport // inferred from sequence or structural similarity /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0010971 // positive regulation of G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0016199 // axon midline choice point recognition // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0016358 // dendrite development // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // traceable author statement /// 0030900 // forebrain development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from sequence or structural similarity /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040014 // regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048669 // collateral sprouting in absence of injury // inferred from sequence or structural similarity /// 0050803 // regulation of synapse structure and activity // inferred from sequence or structural similarity /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051124 // synaptic growth at neuromuscular junction // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from mutant phenotype /// 0051563 // smooth endoplasmic reticulum calcium ion homeostasis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005641 // nuclear envelope lumen // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from sequence or structural similarity /// 0030424 // axon // inferred from sequence or structural similarity /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from direct assay /// 0043198 // dendritic shaft // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0051233 // spindle midzone // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from sequence or structural similarity /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0033130 // acetylcholine receptor binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation /// 0051425 // PTB domain binding // inferred from physical interaction /// 0070851 // growth factor receptor binding // inferred from electronic annotation </td> <td> -12.22 </td> <td> 127.31 </td> <td> -0.23 </td> <td> 0.83 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201934_at </td> <td> 201934_at </td> <td> N92524 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:N92524 /FEA=EST /DB_XREF=gi:1264833 /DB_XREF=est:zb28d02.s1 /CLONE=IMAGE:304899 /UG=Hs.194110 hypothetical protein PRO2730 /FL=gb:AF132207.1 gb:NM_025222.1 </td> <td> N92524 </td> <td> WD repeat domain 82 </td> <td> WDR82 </td> <td> 80335 </td> <td> NM_025222 </td> <td> 0051568 // histone H3-K4 methylation // inferred from direct assay </td> <td> 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0048188 // Set1C/COMPASS complex // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay </td> <td> 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay </td> <td> 6.65 </td> <td> 528.10 </td> <td> 0.23 </td> <td> 0.83 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203642_s_at </td> <td> 203642_s_at </td> <td> NM_014900 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014900.1 /DEF=Homo sapiens KIAA0977 protein (KIAA0977), mRNA. /FEA=mRNA /GEN=KIAA0977 /PROD=KIAA0977 protein /DB_XREF=gi:7662427 /UG=Hs.300855 KIAA0977 protein /FL=gb:AB023194.1 gb:NM_014900.1 </td> <td> NM_014900 </td> <td> cordon-bleu WH2 repeat protein-like 1 </td> <td> COBLL1 </td> <td> 22837 </td> <td> NM_001278458 /// NM_001278460 /// NM_001278461 /// NM_014900 </td> <td> 0007155 // cell adhesion // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation </td> <td> -3.55 </td> <td> 78.15 </td> <td> -0.23 </td> <td> 0.83 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201923_at </td> <td> 201923_at </td> <td> NM_006406 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006406.1 /DEF=Homo sapiens thioredoxin peroxidase (antioxidant enzyme) (AOE372), mRNA.  /FEA=mRNA /GEN=AOE372 /PROD=thioredoxin peroxidase /DB_XREF=gi:5453548 /UG=Hs.83383 thioredoxin peroxidase (antioxidant enzyme) /FL=gb:BC003609.1 gb:NM_006406.1 gb:U25182.1 </td> <td> NM_006406 </td> <td> peroxiredoxin 4 </td> <td> PRDX4 </td> <td> 10549 </td> <td> NM_006406 /// XM_005274438 </td> <td> 0007252 // I-kappaB phosphorylation // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2000255 // negative regulation of male germ cell proliferation // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004601 // peroxidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008379 // thioredoxin peroxidase activity // traceable author statement /// 0016209 // antioxidant activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0051920 // peroxiredoxin activity // inferred from electronic annotation </td> <td> -8.95 </td> <td> 774.50 </td> <td> -0.22 </td> <td> 0.83 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200912_s_at </td> <td> 200912_s_at </td> <td> NM_001967 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001967.2 /DEF=Homo sapiens eukaryotic translation initiation factor 4A, isoform 2 (EIF4A2), mRNA.  /FEA=mRNA /GEN=EIF4A2 /PROD=eukaryotic translation initiation factor 4A,isoform 2 /DB_XREF=gi:9945313 /UG=Hs.173912 eukaryotic translation initiation factor 4A, isoform 2 /FL=gb:D30655.1 gb:NM_001967.2 </td> <td> NM_001967 </td> <td> eukaryotic translation initiation factor 4A2 /// microRNA 1248 /// small nucleolar RNA, H/ACA box 4 /// small nucleolar RNA, H/ACA box 63 /// small nucleolar RNA, H/ACA box 81 /// small nucleolar RNA, C/D box 2 </td> <td> EIF4A2 /// MIR1248 /// SNORA4 /// SNORA63 /// SNORA81 /// SNORD2 </td> <td> 1974 /// 6043 /// 619567 /// 619568 /// 677847 /// 100302143 </td> <td> NM_001967 /// NR_002586 /// NR_002587 /// NR_002588 /// NR_002989 /// NR_031650 </td> <td> 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006446 // regulation of translational initiation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -34.45 </td> <td> 1419.17 </td> <td> -0.22 </td> <td> 0.83 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210142_x_at </td> <td> 210142_x_at </td> <td> AF117234 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF117234.1 /DEF=Homo sapiens flotillin mRNA, complete cds. /FEA=mRNA /PROD=flotillin /DB_XREF=gi:6563241 /UG=Hs.179986 flotillin 1 /FL=gb:AF117234.1 </td> <td> AF117234 </td> <td> flotillin 1 </td> <td> FLOT1 </td> <td> 10211 </td> <td> NM_005803 /// XM_005248780 /// XM_005248781 /// XM_005272759 /// XM_005272760 /// XM_005274909 /// XM_005274910 /// XM_005275335 /// XM_005275336 /// XM_005275502 /// XM_005275503 /// XM_006714947 /// XM_006725465 /// XM_006725672 /// XM_006725971 /// XM_006726072 </td> <td> 0007409 // axonogenesis // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // inferred from mutant phenotype /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0072659 // protein localization to plasma membrane // inferred from electronic annotation /// 0090002 // establishment of protein localization to plasma membrane // inferred from mutant phenotype </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // traceable author statement /// 0008180 // COP9 signalosome // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // traceable author statement /// 0016600 // flotillin complex // inferred from electronic annotation /// 0034451 // centriolar satellite // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002020 // protease binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation </td> <td> -14.70 </td> <td> 555.92 </td> <td> -0.22 </td> <td> 0.83 </td> <td> 0.86 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203774_at </td> <td> 203774_at </td> <td> NM_000254 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000254.1 /DEF=Homo sapiens 5-methyltetrahydrofolate-homocysteine methyltransferase (MTR), mRNA.  /FEA=mRNA /GEN=MTR /PROD=5-methyltetrahydrofolate-homocysteinemethyltransferase /DB_XREF=gi:4557764 /UG=Hs.82283 5-methyltetrahydrofolate-homocysteine methyltransferase /FL=gb:U73338.1 gb:U75743.1 gb:U71285.1 gb:NM_000254.1 </td> <td> NM_000254 </td> <td> 5-methyltetrahydrofolate-homocysteine methyltransferase </td> <td> MTR </td> <td> 4548 </td> <td> NM_000254 /// NM_001291939 /// NM_001291940 /// XM_005273141 /// XM_005273143 /// XM_005273145 /// XM_006711769 /// XM_006711770 </td> <td> 0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0009235 // cobalamin metabolic process // traceable author statement /// 0032259 // methylation // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042558 // pteridine-containing compound metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement </td> <td> 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008705 // methionine synthase activity // inferred from electronic annotation /// 0008898 // S-adenosylmethionine-homocysteine S-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0031419 // cobalamin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -3.17 </td> <td> 91.49 </td> <td> -0.22 </td> <td> 0.83 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202362_at </td> <td> 202362_at </td> <td> NM_002884 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002884.1 /DEF=Homo sapiens RAP1A, member of RAS oncogene family (RAP1A), mRNA. /FEA=mRNA /GEN=RAP1A /PROD=RAP1A, member of RAS oncogene family /DB_XREF=gi:4506412 /UG=Hs.865 RAP1A, member of RAS oncogene family /FL=gb:NM_002884.1 gb:M22995.1 </td> <td> NM_002884 </td> <td> RAP1A, member of RAS oncogene family </td> <td> RAP1A </td> <td> 5906 </td> <td> NM_001010935 /// NM_001291896 /// NM_002884 /// XM_006710803 /// XR_246288 </td> <td> 0000186 // activation of MAPKK activity // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0032486 // Rap protein signal transduction // inferred from mutant phenotype /// 0032854 // positive regulation of Rap GTPase activity // inferred from sequence or structural similarity /// 0038180 // nerve growth factor signaling pathway // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from sequence or structural similarity /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0061028 // establishment of endothelial barrier // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0071320 // cellular response to cAMP // inferred from direct assay /// 1901888 // regulation of cell junction assembly // inferred from mutant phenotype /// 1990090 // cellular response to nerve growth factor stimulus // inferred from sequence or structural similarity /// 2001214 // positive regulation of vasculogenesis // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from sequence or structural similarity /// 0032045 // guanyl-nucleotide exchange factor complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from direct assay /// 0017016 // Ras GTPase binding // inferred from electronic annotation /// 0017034 // Rap guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0032403 // protein complex binding // inferred from direct assay </td> <td> -4.72 </td> <td> 326.46 </td> <td> -0.22 </td> <td> 0.83 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208549_x_at </td> <td> 208549_x_at </td> <td> NM_016171 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016171.1 /DEF=Homo sapiens prothymosin a14 (LOC51685), mRNA. /FEA=CDS /GEN=LOC51685 /PROD=prothymosin a14 /DB_XREF=gi:7706414 /UG=Hs.247919 prothymosin a14 /FL=gb:AF170294.1 gb:NM_016171.1 </td> <td> NM_016171 </td> <td> prothymosin, alpha </td> <td> PTMA </td> <td> 5757 </td> <td> NM_001099285 /// NM_002823 </td> <td> 0006351 // transcription, DNA-templated // traceable author statement </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> 30.38 </td> <td> 916.24 </td> <td> 0.22 </td> <td> 0.83 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201754_at </td> <td> 201754_at </td> <td> NM_004374 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004374.1 /DEF=Homo sapiens cytochrome c oxidase subunit VIc (COX6C), nuclear gene encoding mitochondrial protein, mRNA.  /FEA=mRNA /GEN=COX6C /PROD=cytochrome c oxidase subunit VIc /DB_XREF=gi:4758039 /UG=Hs.74649 cytochrome c oxidase subunit VIc /FL=gb:BC000187.1 gb:NM_004374.1 </td> <td> NM_004374 </td> <td> cytochrome c oxidase subunit VIc </td> <td> COX6C </td> <td> 1345 </td> <td> NM_004374 </td> <td> 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 1902600 // hydrogen ion transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004129 // cytochrome-c oxidase activity // inferred from electronic annotation </td> <td> 15.83 </td> <td> 1091.26 </td> <td> 0.22 </td> <td> 0.83 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201245_s_at </td> <td> 201245_s_at </td> <td> AL523776 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL523776 /FEA=EST /DB_XREF=gi:12787269 /DB_XREF=est:AL523776 /CLONE=CS0DC003YC23 (5 prime) /UG=Hs.108504 hypothetical protein FLJ20113 /FL=gb:NM_017670.1 </td> <td> AL523776 </td> <td> uncharacterized LOC101927673 /// OTU deubiquitinase, ubiquitin aldehyde binding 1 </td> <td> LOC101927673 /// OTUB1 </td> <td> 55611 /// 101927673 </td> <td> NM_017670 /// NR_003089 /// XR_247234 /// XR_247664 /// XR_252904 </td> <td> 0002376 // immune system process // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from direct assay /// 0019538 // protein metabolic process // inferred from electronic annotation /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay /// 1901315 // negative regulation of histone H2A K63-linked ubiquitination // inferred from direct assay /// 2000780 // negative regulation of double-strand break repair // inferred from mutant phenotype </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008242 // omega peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019784 // NEDD8-specific protease activity // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay </td> <td> 5.50 </td> <td> 207.45 </td> <td> 0.22 </td> <td> 0.83 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 207358_x_at </td> <td> 207358_x_at </td> <td> NM_012090 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_012090.1 /DEF=Homo sapiens actin binding protein; macrophin (microfilament and actin filament cross-linker protein) (ACF7), mRNA.  /FEA=mRNA /GEN=ACF7 /PROD=actin binding protein; macrophin (microfilamentand actin filament cross-linker protein) /DB_XREF=gi:10048480 /UG=Hs.108258 actin binding protein; macrophin (microfilament and actin filament cross-linker protein) /FL=gb:NM_012090.1 gb:AF141968.1 </td> <td> NM_012090 </td> <td> microtubule-actin crosslinking factor 1 </td> <td> MACF1 </td> <td> 23499 </td> <td> NM_012090 /// NM_033044 /// XM_005270694 /// XM_005270695 /// XM_005270696 /// XM_005270697 /// XM_005270698 /// XM_005270700 /// XM_006710519 /// XM_006710520 /// XM_006710521 /// XM_006710522 /// XM_006710523 /// XM_006710524 /// XM_006710525 /// XM_006710526 /// XM_006710527 /// XM_006710528 /// XM_006710529 /// XM_006710530 /// XM_006710531 /// XM_006710532 /// XM_006710533 /// XM_006710534 /// XM_006710535 /// XM_006710536 /// XM_006710537 /// XM_006710538 /// XM_006710539 /// XM_006710540 </td> <td> 0001707 // mesoderm formation // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006620 // posttranslational protein targeting to membrane // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0010632 // regulation of epithelial cell migration // inferred from sequence or structural similarity /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from sequence or structural similarity /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay /// 0051893 // regulation of focal adhesion assembly // inferred from sequence or structural similarity </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // non-traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // non-traceable author statement </td> <td> 19.12 </td> <td> 396.59 </td> <td> 0.22 </td> <td> 0.83 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208238_x_at </td> <td> 208238_x_at </td> <td> NM_013344 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_013344.1 /DEF=Homo sapiens leucine zipper-like protein (LZLP), mRNA. /FEA=mRNA /GEN=LZLP /PROD=leucine zipper-like protein /DB_XREF=gi:7106350 /UG=Hs.278952 leucine zipper-like protein /FL=gb:AF159055.1 gb:NM_013344.1 </td> <td> NM_013344 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 4.30 </td> <td> 151.53 </td> <td> 0.22 </td> <td> 0.84 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 213313_at </td> <td> 213313_at </td> <td> AI922519 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI922519 /FEA=EST /DB_XREF=gi:5658483 /DB_XREF=est:wm89a07.x1 /CLONE=IMAGE:2443092 /UG=Hs.55099 rab6 GTPase activating protein (GAP and centrosome-associated) </td> <td> AI922519 </td> <td> RAB GTPase activating protein 1 </td> <td> RABGAP1 </td> <td> 23637 </td> <td> NM_012197 /// XM_005251866 /// XM_005251868 /// XM_006717031 /// XM_006717032 </td> <td> 0007049 // cell cycle // inferred from electronic annotation /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // traceable author statement /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015631 // tubulin binding // traceable author statement </td> <td> -3.07 </td> <td> 231.39 </td> <td> -0.21 </td> <td> 0.84 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217946_s_at </td> <td> 217946_s_at </td> <td> NM_016402 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016402.1 /DEF=Homo sapiens hypothetical protein (HSPC140), mRNA. /FEA=mRNA /GEN=HSPC140 /PROD=hypothetical protein /DB_XREF=gi:7705472 /UG=Hs.279868 hypothetical protein /FL=gb:BC003611.1 gb:AF161489.1 gb:NM_016402.1 </td> <td> NM_016402 </td> <td> SUMO1 activating enzyme subunit 1 </td> <td> SAE1 </td> <td> 10055 </td> <td> NM_001145713 /// NM_001145714 /// NM_005500 /// NR_027280 /// XM_006722963 /// XM_006722964 /// XM_006722965 </td> <td> 0006464 // cellular protein modification process // inferred from electronic annotation /// 0007346 // regulation of mitotic cell cycle // not recorded /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0016925 // protein sumoylation // traceable author statement /// 0019950 // SMT3-dependent protein catabolic process // not recorded /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // not recorded /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004839 // ubiquitin activating enzyme activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from direct assay /// 0008047 // enzyme activator activity // traceable author statement /// 0008641 // small protein activating enzyme activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019948 // SUMO activating enzyme activity // inferred from direct assay /// 0043008 // ATP-dependent protein binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // traceable author statement </td> <td> 8.88 </td> <td> 469.56 </td> <td> 0.21 </td> <td> 0.84 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218777_at </td> <td> 218777_at </td> <td> NM_025232 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_025232.1 /DEF=Homo sapiens hypothetical protein FLJ22246 (FLJ22246), mRNA. /FEA=mRNA /GEN=FLJ22246 /PROD=hypothetical protein FLJ22246 /DB_XREF=gi:13376835 /UG=Hs.289063 hypothetical protein FLJ22246 /FL=gb:NM_025232.1 </td> <td> NM_025232 </td> <td> receptor accessory protein 4 </td> <td> REEP4 </td> <td> 80346 </td> <td> NM_025232 /// XM_006716403 </td> <td> 0006998 // nuclear envelope organization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007084 // mitotic nuclear envelope reassembly // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0008017 // microtubule binding // inferred from sequence or structural similarity </td> <td> -6.25 </td> <td> 154.82 </td> <td> -0.21 </td> <td> 0.84 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211980_at </td> <td> 211980_at </td> <td> AI922605 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI922605 /FEA=EST /DB_XREF=gi:5658569 /DB_XREF=est:wm90c05.x1 /CLONE=IMAGE:2443208 /UG=Hs.119129 collagen, type IV, alpha 1 /FL=gb:NM_001845.1 </td> <td> AI922605 </td> <td> collagen, type IV, alpha 1 </td> <td> COL4A1 </td> <td> 1282 </td> <td> NM_001845 </td> <td> 0001525 // angiogenesis // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from mutant phenotype /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from mutant phenotype /// 0007528 // neuromuscular junction development // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from mutant phenotype /// 0061304 // retinal blood vessel morphogenesis // inferred from mutant phenotype /// 0061333 // renal tubule morphogenesis // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071711 // basement membrane organization // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen trimer // inferred from electronic annotation /// 0005587 // collagen type IV trimer // inferred from mutant phenotype /// 0005604 // basement membrane // inferred by curator /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0031012 // extracellular matrix // inferred from sequence or structural similarity </td> <td> 0005201 // extracellular matrix structural constituent // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0030023 // extracellular matrix constituent conferring elasticity // inferred by curator /// 0048407 // platelet-derived growth factor binding // inferred from direct assay </td> <td> 30.75 </td> <td> 1711.83 </td> <td> 0.21 </td> <td> 0.84 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200743_s_at </td> <td> 200743_s_at </td> <td> NM_000391 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000391.2 /DEF=Homo sapiens ceroid-lipofuscinosis, neuronal 2, late infantile (Jansky-Bielschowsky disease) (CLN2), mRNA.  /FEA=mRNA /GEN=CLN2 /PROD=ceroid-lipofuscinosis, neuronal 2, lateinfantile (Jansky-Bielschowsky disease) /DB_XREF=gi:5597012 /UG=Hs.20478 ceroid-lipofuscinosis, neuronal 2, late infantile (Jansky-Bielschowsky disease) /FL=gb:AF017456.1 gb:NM_000391.2 </td> <td> NM_000391 </td> <td> tripeptidyl peptidase I </td> <td> TPP1 </td> <td> 1200 </td> <td> NM_000391 </td> <td> 0006508 // proteolysis // inferred from mutant phenotype /// 0006629 // lipid metabolic process // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007040 // lysosome organization // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0030163 // protein catabolic process // non-traceable author statement /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0043171 // peptide catabolic process // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045453 // bone resorption // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from sequence or structural similarity </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from mutant phenotype /// 0042470 // melanosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from direct assay /// 0004175 // endopeptidase activity // inferred from mutant phenotype /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from mutant phenotype /// 0008236 // serine-type peptidase activity // inferred from mutant phenotype /// 0008240 // tripeptidyl-peptidase activity // inferred from direct assay /// 0008240 // tripeptidyl-peptidase activity // inferred from mutant phenotype /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 6.62 </td> <td> 384.66 </td> <td> 0.21 </td> <td> 0.84 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202095_s_at </td> <td> 202095_s_at </td> <td> NM_001168 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001168.1 /DEF=Homo sapiens baculoviral IAP repeat-containing 5 (survivin) (BIRC5), mRNA.  /FEA=mRNA /GEN=BIRC5 /PROD=baculoviral IAP repeat-containing protein 5 /DB_XREF=gi:4502144 /UG=Hs.1578 baculoviral IAP repeat-containing 5 (survivin) /FL=gb:NM_001168.1 gb:AF077350.1 </td> <td> NM_001168 </td> <td> baculoviral IAP repeat containing 5 </td> <td> BIRC5 </td> <td> 332 </td> <td> NM_001012270 /// NM_001012271 /// NM_001168 /// XR_243654 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // inferred from direct assay /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0007067 // mitotic nuclear division // traceable author statement /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0031503 // protein complex localization // inferred from mutant phenotype /// 0031536 // positive regulation of exit from mitosis // inferred from mutant phenotype /// 0031577 // spindle checkpoint // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0051301 // cell division // inferred from mutant phenotype /// 0051303 // establishment of chromosome localization // inferred from mutant phenotype </td> <td> 0000228 // nuclear chromosome // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0031021 // interphase microtubule organizing center // inferred from direct assay /// 0032133 // chromosome passenger complex // inferred from physical interaction </td> <td> 0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004872 // receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // non-traceable author statement /// 0008536 // Ran GTPase binding // inferred from physical interaction /// 0015631 // tubulin binding // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0048037 // cofactor binding // inferred from direct assay /// 0050897 // cobalt ion binding // non-traceable author statement /// 0051087 // chaperone binding // inferred from physical interaction </td> <td> -5.18 </td> <td> 114.21 </td> <td> -0.21 </td> <td> 0.84 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209481_at </td> <td> 209481_at </td> <td> AF226044 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF226044.1 /DEF=Homo sapiens HSNFRK (HSNFRK) mRNA, complete cds. /FEA=mRNA /GEN=HSNFRK /PROD=HSNFRK /DB_XREF=gi:9295326 /UG=Hs.79025 KIAA0096 protein /FL=gb:AF226044.1 </td> <td> AF226044 </td> <td> SNF related kinase </td> <td> SNRK </td> <td> 54861 </td> <td> NM_001100594 /// NM_017719 /// XM_005265245 /// XM_005265246 </td> <td> 0006468 // protein phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030099 // myeloid cell differentiation // traceable author statement </td> <td> 0005634 // nucleus // inferred from sequence or structural similarity </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 8.67 </td> <td> 752.01 </td> <td> 0.21 </td> <td> 0.84 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217801_at </td> <td> 217801_at </td> <td> NM_006886 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006886.1 /DEF=Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit (ATP5E), mRNA.  /FEA=mRNA /GEN=ATP5E /PROD=ATP synthase, H+ transporting, mitochondrial F1complex, epsilon subunit /DB_XREF=gi:5901895 /UG=Hs.177530 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit /FL=gb:BC001690.1 gb:BC003671.1 gb:AF077045.1 gb:NM_006886.1 gb:AF052955.1 </td> <td> NM_006886 </td> <td> ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit </td> <td> ATP5E </td> <td> 514 </td> <td> NM_006886 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006457 // protein folding // traceable author statement /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0015914 // phospholipid transport //  /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation </td> <td> 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005758 // mitochondrial intermembrane space //  /// 0005759 // mitochondrial matrix // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation /// 1990050 // phosphatidic acid transporter activity // </td> <td> -15.30 </td> <td> 1070.40 </td> <td> -0.21 </td> <td> 0.84 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203489_at </td> <td> 203489_at </td> <td> NM_006427 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_006427.2 /DEF=Homo sapiens CD27-binding (Siva) protein (SIVA), transcript variant 1, mRNA.  /FEA=mRNA /GEN=SIVA /PROD=CD27-binding (Siva) protein isoform 1 /DB_XREF=gi:11277467 /UG=Hs.112058 CD27-binding (Siva) protein /FL=gb:NM_006427.2 gb:U82938.1 </td> <td> NM_006427 </td> <td> SIVA1, apoptosis-inducing factor </td> <td> SIVA1 </td> <td> 10572 </td> <td> NM_006427 /// NM_021709 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0006924 // activation-induced cell death of T cells // inferred from direct assay /// 0009615 // response to virus // inferred from sequence or structural similarity /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0097191 // extrinsic apoptotic signaling pathway // inferred from direct assay /// 0097193 // intrinsic apoptotic signaling pathway // inferred from direct assay /// 1901030 // positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0001618 // virus receptor activity // inferred from sequence or structural similarity /// 0005175 // CD27 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -4.60 </td> <td> 183.50 </td> <td> -0.21 </td> <td> 0.84 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 215553_x_at </td> <td> 215553_x_at </td> <td> AK024315 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK024315.1 /DEF=Homo sapiens cDNA FLJ14253 fis, clone OVARC1001376. /FEA=mRNA /DB_XREF=gi:10436666 /UG=Hs.300694 Homo sapiens cDNA FLJ14253 fis, clone OVARC1001376 </td> <td> AK024315 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -3.90 </td> <td> 75.25 </td> <td> -0.21 </td> <td> 0.84 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202059_s_at </td> <td> 202059_s_at </td> <td> NM_002264 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002264.1 /DEF=Homo sapiens karyopherin alpha 1 (importin alpha 5) (KPNA1), mRNA. /FEA=mRNA /GEN=KPNA1 /PROD=karyopherin alpha 1 /DB_XREF=gi:4504894 /UG=Hs.169149 karyopherin alpha 1 (importin alpha 5) /FL=gb:BC002374.1 gb:BC003009.1 gb:NM_002264.1 </td> <td> NM_002264 </td> <td> karyopherin alpha 1 (importin alpha 5) </td> <td> KPNA1 </td> <td> 3836 </td> <td> NM_002264 /// NR_026698 /// XM_005247437 /// XM_005247439 </td> <td> 0000018 // regulation of DNA recombination // traceable author statement /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing protein import into nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019058 // viral life cycle // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0042307 // positive regulation of protein import into nucleus // inferred from sequence or structural similarity /// 0075733 // intracellular transport of virus // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0030425 // dendrite // inferred from sequence or structural similarity </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation </td> <td> -8.27 </td> <td> 236.76 </td> <td> -0.21 </td> <td> 0.84 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211755_s_at </td> <td> 211755_s_at </td> <td> BC005960 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005960.1 /DEF=Homo sapiens, Similar to ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1, clone MGC:14609, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to ATP synthase, H+ transporting,mitochondrial F0 complex, subunit b, isoform 1 /DB_XREF=gi:13543617 /FL=gb:BC005960.1 </td> <td> BC005960 </td> <td> ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1 </td> <td> ATP5F1 </td> <td> 515 </td> <td> NM_001688 /// XM_005270929 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // not recorded /// 0015992 // proton transport // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044237 // cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // not recorded /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // not recorded </td> <td> 14.80 </td> <td> 1291.82 </td> <td> 0.21 </td> <td> 0.84 </td> <td> 0.87 </td> <td> -4.62 </td> </tr>
  <tr> <td> 31861_at </td> <td> 31861_at </td> <td> L14754 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. L14754:Human DNA-binding protein (SMBP2) mRNA, complete cds /cds=(49,3030) /gb=L14754 /gi=401775 /ug=Hs.1521 /len=3892 </td> <td> L14754 </td> <td> immunoglobulin mu binding protein 2 </td> <td> IGHMBP2 </td> <td> 3508 </td> <td> NM_002180 /// XM_005273974 /// XM_005273975 /// XM_005273976 /// XM_005273977 /// XR_247198 </td> <td> 0006200 // ATP catabolic process // inferred from direct assay /// 0006260 // DNA replication // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0032508 // DNA duplex unwinding // traceable author statement /// 0051260 // protein homooligomerization // inferred from physical interaction </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030424 // axon // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030529 // ribonucleoprotein complex // inferred from sequence or structural similarity /// 0032797 // SMN complex // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0000049 // tRNA binding // inferred from direct assay /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003678 // DNA helicase activity // traceable author statement /// 0003697 // single-stranded DNA binding // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008186 // RNA-dependent ATPase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0032575 // ATP-dependent 5'-3' RNA helicase activity // inferred from direct assay /// 0043022 // ribosome binding // inferred from direct assay /// 0043141 // ATP-dependent 5'-3' DNA helicase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -4.63 </td> <td> 173.14 </td> <td> -0.20 </td> <td> 0.84 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 38691_s_at </td> <td> 38691_s_at </td> <td> J03553 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. J03553:Human pulmonary surfactant protein (SP5) mRNA, complete cds /cds=(146,739) /gb=J03553 /gi=338306 /ug=Hs.1074 /len=963 </td> <td> J03553 </td> <td> surfactant protein C </td> <td> SFTPC </td> <td> 6440 </td> <td> NM_001172357 /// NM_001172410 /// NM_003018 /// XM_005273598 /// XM_006716379 /// XM_006716380 </td> <td> 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0009725 // response to hormone // inferred from electronic annotation /// 0009749 // response to glucose // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0033189 // response to vitamin A // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051384 // response to glucocorticoid // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0070741 // response to interleukin-6 // inferred from electronic annotation /// 0070848 // response to growth factor // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071732 // cellular response to nitric oxide // inferred from electronic annotation </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from electronic annotation /// 0097208 // alveolar lamellar body // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation </td> <td> -3.08 </td> <td> 55.64 </td> <td> -0.20 </td> <td> 0.84 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 220071_x_at </td> <td> 220071_x_at </td> <td> NM_018097 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_018097.1 /DEF=Homo sapiens hypothetical protein FLJ10460 (FLJ10460), mRNA. /FEA=mRNA /GEN=FLJ10460 /PROD=hypothetical protein FLJ10460 /DB_XREF=gi:8922429 /UG=Hs.14347 hypothetical protein FLJ10460 /FL=gb:NM_018097.1 </td> <td> NM_018097 </td> <td> HAUS augmin-like complex, subunit 2 </td> <td> HAUS2 </td> <td> 55142 </td> <td> NM_001130447 /// NM_018097 /// XM_006720600 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from mutant phenotype /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0070652 // HAUS complex // inferred from direct assay </td> <td>  </td> <td> 5.42 </td> <td> 144.34 </td> <td> 0.20 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210457_x_at </td> <td> 210457_x_at </td> <td> AF176039 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF176039.1 /DEF=Homo sapiens high mobility group protein-R mRNA, complete cds. /FEA=mRNA /PROD=high mobility group protein-R /DB_XREF=gi:5834272 /UG=Hs.139800 high-mobility group (nonhistone chromosomal) protein isoforms I and Y /FL=gb:AF176039.1 </td> <td> AF176039 </td> <td> high mobility group AT-hook 1 </td> <td> HMGA1 </td> <td> 3159 </td> <td> NM_002131 /// NM_145899 /// NM_145901 /// NM_145902 /// NM_145903 /// NM_145904 /// NM_145905 /// XM_005249061 </td> <td> 0000737 // DNA catabolic process, endonucleolytic // inferred from direct assay /// 0006268 // DNA unwinding involved in DNA replication // non-traceable author statement /// 0006284 // base-excision repair // inferred from direct assay /// 0006337 // nucleosome disassembly // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0009615 // response to virus // inferred from expression pattern /// 0016032 // viral process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031936 // negative regulation of chromatin silencing // traceable author statement /// 0035986 // senescence-associated heterochromatin focus assembly // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // inferred from mutant phenotype /// 0075713 // establishment of integrated proviral latency // traceable author statement /// 0090402 // oncogene-induced cell senescence // inferred from direct assay /// 2000774 // positive regulation of cellular senescence // inferred from mutant phenotype </td> <td> 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0035985 // senescence-associated heterochromatin focus // inferred from direct assay </td> <td> 0003677 // DNA binding // traceable author statement /// 0003680 // AT DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0042974 // retinoic acid receptor binding // inferred from direct assay /// 0042975 // peroxisome proliferator activated receptor binding // inferred from direct assay /// 0046965 // retinoid X receptor binding // inferred from direct assay /// 0051575 // 5'-deoxyribose-5-phosphate lyase activity // inferred from direct assay </td> <td> -4.92 </td> <td> 88.44 </td> <td> -0.20 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203720_s_at </td> <td> 203720_s_at </td> <td> NM_001983 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001983.1 /DEF=Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) (ERCC1), mRNA.  /FEA=mRNA /GEN=ERCC1 /PROD=excision repair cross-complementing rodentrepair deficiency, complementation group 1 (includesoverlapping antisense sequence) /DB_XREF=gi:4503598 /UG=Hs.59544 excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) /FL=gb:M28650.1 gb:AF001925.1 gb:NM_001983.1 gb:M13194.1 </td> <td> NM_001983 </td> <td> excision repair cross-complementation group 1 </td> <td> ERCC1 </td> <td> 2067 </td> <td> NM_001166049 /// NM_001983 /// NM_202001 /// XM_005258634 /// XM_005258635 /// XM_005258636 /// XM_005258637 </td> <td> 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0000720 // pyrimidine dimer repair by nucleotide-excision repair // inferred from electronic annotation /// 0000737 // DNA catabolic process, endonucleolytic // inferred from direct assay /// 0001302 // replicative cell aging // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006289 // nucleotide-excision repair // inferred from genetic interaction /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006295 // nucleotide-excision repair, DNA incision, 3'-to lesion // inferred from mutant phenotype /// 0006296 // nucleotide-excision repair, DNA incision, 5'-to lesion // inferred from mutant phenotype /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from genetic interaction /// 0006312 // mitotic recombination // inferred from mutant phenotype /// 0006949 // syncytium formation // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from mutant phenotype /// 0007281 // germ cell development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009628 // response to abiotic stimulus // inferred from electronic annotation /// 0009650 // UV protection // inferred from electronic annotation /// 0009744 // response to sucrose // inferred from electronic annotation /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0032205 // negative regulation of telomere maintenance // inferred from mutant phenotype /// 0035166 // post-embryonic hemopoiesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045190 // isotype switching // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0048477 // oogenesis // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation </td> <td> 0000109 // nucleotide-excision repair complex // inferred from direct assay /// 0000784 // nuclear chromosome, telomeric region // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005669 // transcription factor TFIID complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000014 // single-stranded DNA endodeoxyribonuclease activity // inferred from direct assay /// 0001094 // TFIID-class transcription factor binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017025 // TBP-class protein binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043566 // structure-specific DNA binding // inferred from direct assay </td> <td> -4.42 </td> <td> 162.71 </td> <td> -0.20 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 214052_x_at </td> <td> 214052_x_at </td> <td> AW301305 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW301305 /FEA=EST /DB_XREF=gi:6710982 /DB_XREF=est:xs75a07.x1 /CLONE=IMAGE:2775444 /UG=Hs.69559 KIAA1096 protein </td> <td> AW301305 </td> <td> proline-rich coiled-coil 2C </td> <td> PRRC2C </td> <td> 23215 </td> <td> NM_015172 /// XM_005245015 /// XM_005245016 /// XM_005245017 /// XM_005245018 /// XM_005245019 /// XM_005245020 /// XM_005245022 /// XM_005245023 /// XM_005245024 /// XM_005245025 /// XM_005245026 /// XM_005245027 /// XM_005245028 /// XM_005245029 /// XM_005245030 /// XM_006711238 /// XM_006711239 </td> <td>  </td> <td>  </td> <td> 0008022 // protein C-terminus binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 3.43 </td> <td> 66.04 </td> <td> 0.20 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218143_s_at </td> <td> 218143_s_at </td> <td> NM_005697 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005697.2 /DEF=Homo sapiens secretory carrier membrane protein 2 (SCAMP2), mRNA. /FEA=mRNA /GEN=SCAMP2 /PROD=secretory carrier membrane protein 2 /DB_XREF=gi:5730030 /UG=Hs.238030 secretory carrier membrane protein 2 /FL=gb:BC001376.1 gb:BC004385.1 gb:AF005038.2 gb:NM_005697.2 </td> <td> NM_005697 </td> <td> secretory carrier membrane protein 2 </td> <td> SCAMP2 </td> <td> 10066 </td> <td> NM_005697 /// XM_006720369 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from direct assay /// 0030133 // transport vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> 4.00 </td> <td> 227.88 </td> <td> 0.20 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201971_s_at </td> <td> 201971_s_at </td> <td> NM_001690 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001690.1 /DEF=Homo sapiens ATPase, H+ transporting, lysosomal (vacuolar proton pump), alpha polypeptide, 70kD, isoform 1 (ATP6A1), mRNA.  /FEA=mRNA /GEN=ATP6A1 /PROD=ATPase, H+ transporting, lysosomal (vacuolarproton pump), alpha polypeptide, 70kD, isoform 1 /DB_XREF=gi:4502304 /UG=Hs.281866 ATPase, H+ transporting, lysosomal (vacuolar proton pump), alpha polypeptide, 70kD, isoform 1 /FL=gb:L09235.1 gb:NM_001690.1 gb:AF113129.1 </td> <td> NM_001690 </td> <td> ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A </td> <td> ATP6V1A </td> <td> 523 </td> <td> NM_001690 </td> <td> 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral component of plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // traceable author statement /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation </td> <td> -3.62 </td> <td> 136.11 </td> <td> -0.20 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212123_at </td> <td> 212123_at </td> <td> AL050022 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL050022.1 /DEF=Homo sapiens mRNA; cDNA DKFZp564D116 (from clone DKFZp564D116); partial cds.  /FEA=mRNA /GEN=DKFZp564D116 /PROD=hypothetical protein /DB_XREF=gi:4884091 /UG=Hs.181185 DKFZP564D116 protein </td> <td> AL050022 </td> <td> tectonic family member 3 </td> <td> TCTN3 </td> <td> 26123 </td> <td> NM_001143973 /// NM_015631 /// XM_005269690 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from mutant phenotype /// 0030030 // cell projection organization // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from electronic annotation </td> <td> 4.43 </td> <td> 163.84 </td> <td> 0.20 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212254_s_at </td> <td> 212254_s_at </td> <td> AI798790 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI798790 /FEA=EST /DB_XREF=gi:5364262 /DB_XREF=est:we92f11.x1 /CLONE=IMAGE:2348589 /UG=Hs.198689 KIAA0728 protein </td> <td> AI798790 </td> <td> dystonin </td> <td> DST </td> <td> 667 </td> <td> NM_001144769 /// NM_001144770 /// NM_001144771 /// NM_001723 /// NM_015548 /// NM_020388 /// NM_183380 /// XM_005249310 /// XM_005249311 /// XM_005249312 /// XM_005249313 /// XM_005249314 /// XM_005249315 /// XM_005249316 /// XM_005249317 /// XM_005249318 /// XM_005249319 /// XM_005249320 /// XM_005249322 /// XM_005249323 /// XM_005249324 /// XM_005249325 /// XM_005249326 /// XM_006715169 </td> <td> 0000226 // microtubule cytoskeleton organization // inferred from direct assay /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006620 // posttranslational protein targeting to membrane // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008090 // retrograde axon cargo transport // inferred from electronic annotation /// 0009611 // response to wounding // inferred from direct assay /// 0016055 // Wnt signaling pathway // inferred from electronic annotation /// 0030011 // maintenance of cell polarity // inferred from mutant phenotype /// 0030198 // extracellular matrix organization // traceable author statement /// 0031110 // regulation of microtubule polymerization or depolymerization // inferred from electronic annotation /// 0031122 // cytoplasmic microtubule organization // inferred from electronic annotation /// 0031581 // hemidesmosome assembly // inferred from direct assay /// 0045104 // intermediate filament cytoskeleton organization // inferred from expression pattern /// 0045104 // intermediate filament cytoskeleton organization // inferred from sequence or structural similarity /// 0045104 // intermediate filament cytoskeleton organization // non-traceable author statement /// 0048870 // cell motility // inferred from mutant phenotype /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005604 // basement membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0009925 // basal plasma membrane // non-traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030018 // Z disc // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from direct assay /// 0030056 // hemidesmosome // traceable author statement /// 0030424 // axon // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay /// 0031673 // H zone // inferred from electronic annotation /// 0035371 // microtubule plus-end // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay /// 0060053 // neurofilament cytoskeleton // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016887 // ATPase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from direct assay </td> <td> -9.00 </td> <td> 298.93 </td> <td> -0.19 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202100_at </td> <td> 202100_at </td> <td> BG169673 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG169673 /FEA=EST /DB_XREF=gi:12676376 /DB_XREF=est:602324650F1 /CLONE=IMAGE:4427484 /UG=Hs.250811 v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein) /FL=gb:M35416.1 gb:NM_002881.1 </td> <td> BG169673 </td> <td> v-ral simian leukemia viral oncogene homolog B </td> <td> RALB </td> <td> 5899 </td> <td> NM_002881 /// XM_005263724 /// XM_005263727 /// XM_005263728 /// XM_005263729 </td> <td> 0000910 // cytokinesis // inferred from direct assay /// 0001928 // regulation of exocyst assembly // inferred from sequence or structural similarity /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0060178 // regulation of exocyst localization // inferred from sequence or structural similarity </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay </td> <td> -8.07 </td> <td> 339.79 </td> <td> -0.19 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212307_s_at </td> <td> 212307_s_at </td> <td> BF001665 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF001665 /FEA=EST /DB_XREF=gi:10701940 /DB_XREF=est:7g91d11.x1 /CLONE=IMAGE:3313845 /UG=Hs.100293 O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) </td> <td> BF001665 </td> <td> O-linked N-acetylglucosamine (GlcNAc) transferase </td> <td> OGT </td> <td> 8473 </td> <td> NM_003605 /// NM_181672 /// NM_181673 /// XM_005262308 /// XM_006724714 </td> <td> 0006110 // regulation of glycolytic process // inferred from direct assay /// 0006325 // chromatin organization // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006493 // protein O-linked glycosylation // inferred from direct assay /// 0006493 // protein O-linked glycosylation // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007584 // response to nutrient // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0032868 // response to insulin // inferred from direct assay /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0035020 // regulation of Rac protein signal transduction // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay /// 0045862 // positive regulation of proteolysis // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046626 // regulation of insulin receptor signaling pathway // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from direct assay /// 0061087 // positive regulation of histone H3-K27 methylation // inferred from mutant phenotype /// 0071300 // cellular response to retinoic acid // inferred from mutant phenotype /// 0080182 // histone H3-K4 trimethylation // inferred from mutant phenotype /// 0090526 // regulation of gluconeogenesis involved in cellular glucose homeostasis // inferred from sequence or structural similarity </td> <td> 0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0008047 // enzyme activator activity // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0008375 // acetylglucosaminyltransferase activity // traceable author statement /// 0016262 // protein N-acetylglucosaminyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0043995 // histone acetyltransferase activity (H4-K5 specific) // inferred from direct assay /// 0043996 // histone acetyltransferase activity (H4-K8 specific) // inferred from direct assay /// 0046972 // histone acetyltransferase activity (H4-K16 specific) // inferred from direct assay /// 0097363 // protein O-GlcNAc transferase activity // inferred from sequence or structural similarity </td> <td> 3.28 </td> <td> 88.81 </td> <td> 0.19 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 213872_at </td> <td> 213872_at </td> <td> BE465032 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE465032 /FEA=EST /DB_XREF=gi:9510807 /DB_XREF=est:hv76g09.x1 /CLONE=IMAGE:3179392 /UG=Hs.173685 hypothetical protein FLJ12619 </td> <td> BE465032 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -28.05 </td> <td> 861.58 </td> <td> -0.19 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218010_x_at </td> <td> 218010_x_at </td> <td> NM_024299 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024299.1 /DEF=Homo sapiens hypothetical protein MGC2479 (MGC2479), mRNA. /FEA=mRNA /GEN=MGC2479 /PROD=hypothetical protein MGC2479 /DB_XREF=gi:13236523 /UG=Hs.79625 hypothetical protein MGC2479 /FL=gb:BC002531.1 gb:NM_024299.1 </td> <td> NM_024299 </td> <td> pancreatic progenitor cell differentiation and proliferation factor </td> <td> PPDPF </td> <td> 79144 </td> <td> NM_024299 </td> <td> 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation </td> <td>  </td> <td>  </td> <td> -3.68 </td> <td> 144.86 </td> <td> -0.19 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 121_at </td> <td> 121_at </td> <td> X69699 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> X69699 /FEATURE= /DEFINITION=HSPAX8A H.sapiens Pax8 mRNA </td> <td> X69699 </td> <td> paired box 8 </td> <td> PAX8 </td> <td> 7849 </td> <td> NM_003466 /// NM_013951 /// NM_013952 /// NM_013953 /// NM_013992 </td> <td> 0001655 // urogenital system development // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from expression pattern /// 0001822 // kidney development // inferred from expression pattern /// 0001823 // mesonephros development // inferred from sequence or structural similarity /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from expression pattern /// 0006351 // transcription, DNA-templated // inferred from direct assay /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from expression pattern /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030878 // thyroid gland development // inferred from expression pattern /// 0030878 // thyroid gland development // inferred from mutant phenotype /// 0038194 // thyroid-stimulating hormone signaling pathway // traceable author statement /// 0039003 // pronephric field specification // inferred from sequence or structural similarity /// 0042472 // inner ear morphogenesis // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-templated // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048793 // pronephros development // inferred from sequence or structural similarity /// 0071371 // cellular response to gonadotropin stimulus // inferred from direct assay /// 0071599 // otic vesicle development // inferred from expression pattern /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072073 // kidney epithelium development // inferred from electronic annotation /// 0072108 // positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from sequence or structural similarity /// 0072164 // mesonephric tubule development // inferred from electronic annotation /// 0072207 // metanephric epithelium development // inferred from expression pattern /// 0072221 // metanephric distal convoluted tubule development // inferred from sequence or structural similarity /// 0072278 // metanephric comma-shaped body morphogenesis // inferred from expression pattern /// 0072284 // metanephric S-shaped body morphogenesis // inferred from expression pattern /// 0072289 // metanephric nephron tubule formation // inferred from sequence or structural similarity /// 0072305 // negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis // inferred from sequence or structural similarity /// 0072307 // regulation of metanephric nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 1900212 // negative regulation of mesenchymal cell apoptotic process involved in metanephros development // inferred from sequence or structural similarity /// 1900215 // negative regulation of apoptotic process involved in metanephric collecting duct development // inferred from sequence or structural similarity /// 1900218 // negative regulation of apoptotic process involved in metanephric nephron tubule development // inferred from sequence or structural similarity /// 2000594 // positive regulation of metanephric DCT cell differentiation // inferred from sequence or structural similarity /// 2000611 // positive regulation of thyroid hormone generation // inferred from mutant phenotype /// 2000612 // regulation of thyroid-stimulating hormone secretion // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay </td> <td> 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0004996 // thyroid-stimulating hormone receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay </td> <td> -4.68 </td> <td> 299.81 </td> <td> -0.19 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208704_x_at </td> <td> 208704_x_at </td> <td> BC000373 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC000373.1 /DEF=Homo sapiens, Similar to amyloid beta (A4) precursor-like protein 2, clone MGC:8371, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to amyloid beta (A4) precursor-likeprotein 2 /DB_XREF=gi:12653210 /UG=Hs.279518 amyloid beta (A4) precursor-like protein 2 /FL=gb:BC000373.1 </td> <td> BC000373 </td> <td> amyloid beta (A4) precursor-like protein 2 </td> <td> APLP2 </td> <td> 334 </td> <td> NM_001142276 /// NM_001142277 /// NM_001142278 /// NM_001243299 /// NM_001642 /// NR_024515 /// NR_024516 </td> <td> 0001967 // suckling behavior // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // non-traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003677 // DNA binding // non-traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046914 // transition metal ion binding // inferred from electronic annotation </td> <td> 17.90 </td> <td> 1411.22 </td> <td> 0.19 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 55583_at </td> <td> 55583_at </td> <td> AI198543 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. AI198543:qf49f11.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-1753389 /clone_end=3' /gb=AI198543 /gi=3751149 /ug=Hs.8982 /len=794 </td> <td> AI198543 </td> <td> dedicator of cytokinesis 6 </td> <td> DOCK6 </td> <td> 57572 </td> <td> NM_020812 /// XM_005260000 /// XM_005260001 /// XM_006722802 /// XM_006722803 /// XM_006722804 </td> <td> 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation </td> <td> 5.93 </td> <td> 217.19 </td> <td> 0.19 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212140_at </td> <td> 212140_at </td> <td> AB014548 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB014548.1 /DEF=Homo sapiens mRNA for KIAA0648 protein, partial cds. /FEA=mRNA /GEN=KIAA0648 /PROD=KIAA0648 protein /DB_XREF=gi:3327109 /UG=Hs.31921 KIAA0648 protein </td> <td> AB014548 </td> <td> PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) </td> <td> PDS5A </td> <td> 23244 </td> <td> NM_001100399 /// NM_001100400 /// NM_015200 /// XM_005262652 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitotic nuclear division // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation </td> <td> 0000775 // chromosome, centromeric region // traceable author statement /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay </td> <td> 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -4.03 </td> <td> 220.34 </td> <td> -0.19 </td> <td> 0.85 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203821_at </td> <td> 203821_at </td> <td> NM_001945 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001945.1 /DEF=Homo sapiens diphtheria toxin receptor (heparin-binding epidermal growth factor-like growth factor) (DTR), mRNA.  /FEA=mRNA /GEN=DTR /PROD=diphtheria toxin receptor (heparin-bindingepidermal growth factor-like growth factor) /DB_XREF=gi:4503412 /UG=Hs.799 diphtheria toxin receptor (heparin-binding epidermal growth factor-like growth factor) /FL=gb:M60278.1 gb:NM_001945.1 </td> <td> NM_001945 </td> <td> heparin-binding EGF-like growth factor </td> <td> HBEGF </td> <td> 1839 </td> <td> NM_001945 </td> <td> 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from mutant phenotype /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007517 // muscle organ development // traceable author statement /// 0008016 // regulation of heart contraction // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0035313 // wound healing, spreading of epidermal cells // inferred from electronic annotation /// 0038095 // Fc-epsilon receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0051545 // negative regulation of elastin biosynthetic process // inferred from electronic annotation /// 0051549 // positive regulation of keratinocyte migration // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling // inferred from mutant phenotype /// 0090303 // positive regulation of wound healing // inferred from mutant phenotype </td> <td> 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral component of plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from direct assay /// 0008201 // heparin binding // inferred from mutant phenotype </td> <td> 7.20 </td> <td> 259.45 </td> <td> 0.19 </td> <td> 0.86 </td> <td> 0.88 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212296_at </td> <td> 212296_at </td> <td> NM_005805 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_005805.1 /DEF=Homo sapiens 26S proteasome-associated pad1 homolog (POH1), mRNA. /FEA=CDS /GEN=POH1 /PROD=26S proteasome-associated pad1 homolog /DB_XREF=gi:5031980 /UG=Hs.178761 26S proteasome-associated pad1 homolog /FL=gb:U86782.1 gb:NM_005805.1 </td> <td> NM_005805 </td> <td> proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 </td> <td> PSMD14 </td> <td> 10213 </td> <td> NM_005805 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010950 // positive regulation of endopeptidase activity // inferred from mutant phenotype /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0061136 // regulation of proteasomal protein catabolic process // inferred from mutant phenotype /// 0070536 // protein K63-linked deubiquitination // inferred from mutant phenotype /// 0070536 // protein K63-linked deubiquitination // traceable author statement </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008541 // proteasome regulatory particle, lid subcomplex // inferred from mutant phenotype /// 0022624 // proteasome accessory complex // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0061133 // endopeptidase activator activity // inferred from mutant phenotype /// 0070628 // proteasome binding // inferred from direct assay </td> <td> 9.20 </td> <td> 771.62 </td> <td> 0.19 </td> <td> 0.86 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210935_s_at </td> <td> 210935_s_at </td> <td> AF274954 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF274954.1 /DEF=Homo sapiens PNAS-29 mRNA, complete cds. /FEA=mRNA /PROD=PNAS-29 /DB_XREF=gi:12751070 /UG=Hs.326791 Homo sapiens PNAS-29 mRNA, complete cds /FL=gb:AF274954.1 </td> <td> AF274954 </td> <td> WD repeat domain 1 </td> <td> WDR1 </td> <td> 9948 </td> <td> NM_005112 /// NM_017491 /// XM_006713988 </td> <td> 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007605 // sensory perception of sound // traceable author statement /// 0030168 // platelet activation // traceable author statement </td> <td> 0002102 // podosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation </td> <td> 6.32 </td> <td> 231.89 </td> <td> 0.19 </td> <td> 0.86 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 219329_s_at </td> <td> 219329_s_at </td> <td> NM_016085 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016085.1 /DEF=Homo sapiens apoptosis related protein APR-3 (APR-3), mRNA. /FEA=mRNA /GEN=APR-3 /PROD=apoptosis related protein APR-3 /DB_XREF=gi:7706360 /UG=Hs.9527 apoptosis related protein APR-3 /FL=gb:AF144055.2 gb:NM_016085.1 </td> <td> NM_016085 </td> <td> all-trans retinoic acid-induced differentiation factor </td> <td> ATRAID </td> <td> 51374 </td> <td> NM_001170795 /// NM_016085 /// NM_080592 </td> <td> 0010468 // regulation of gene expression // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from direct assay /// 0033689 // negative regulation of osteoblast proliferation // inferred from direct assay /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 2000599 // negative regulation of cyclin catabolic process // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction </td> <td> -3.42 </td> <td> 397.91 </td> <td> -0.19 </td> <td> 0.86 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211987_at </td> <td> 211987_at </td> <td> NM_001068 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:NM_001068.1 /DEF=Homo sapiens topoisomerase (DNA) II beta (180kD) (TOP2B), mRNA. /FEA=CDS /GEN=TOP2B /PROD=topoisomerase (DNA) II beta (180kD) /DB_XREF=gi:11225253 /UG=Hs.75248 topoisomerase (DNA) II beta (180kD) /FL=gb:NM_001068.1 </td> <td> NM_001068 </td> <td> topoisomerase (DNA) II beta 180kDa </td> <td> TOP2B </td> <td> 7155 </td> <td> NM_001068 /// XM_005265427 /// XR_427287 </td> <td> 0000712 // resolution of meiotic recombination intermediates // not recorded /// 0000819 // sister chromatid segregation // not recorded /// 0001764 // neuron migration // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006261 // DNA-dependent DNA replication //  /// 0006265 // DNA topological change // inferred from direct assay /// 0006268 // DNA unwinding involved in DNA replication // not recorded /// 0006312 // mitotic recombination // not recorded /// 0007059 // chromosome segregation //  /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0044774 // mitotic DNA integrity checkpoint // not recorded </td> <td> 0000792 // heterochromatin // inferred from direct assay /// 0000795 // synaptonemal complex //  /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0009295 // nucleoid // not recorded /// 0009330 // DNA topoisomerase complex (ATP-hydrolyzing) // not recorded /// 0071778 // WINAC complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003916 // DNA topoisomerase activity // inferred from electronic annotation /// 0003918 // DNA topoisomerase type II (ATP-hydrolyzing) activity // inferred from direct assay /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008301 // DNA binding, bending // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction </td> <td> -6.88 </td> <td> 289.66 </td> <td> -0.19 </td> <td> 0.86 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212608_s_at </td> <td> 212608_s_at </td> <td> W85912 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:W85912 /FEA=EST /DB_XREF=gi:1398341 /DB_XREF=est:zh52b12.s1 /CLONE=IMAGE:415679 /UG=Hs.323470 Homo sapiens cDNA: FLJ22106 fis, clone HEP17675 </td> <td> W85912 </td> <td> nudix (nucleoside diphosphate linked moiety X)-type motif 3 </td> <td> NUDT3 </td> <td> 11165 </td> <td> NM_006703 </td> <td> 0007267 // cell-cell signaling // traceable author statement /// 0015961 // diadenosine polyphosphate catabolic process // traceable author statement /// 0043647 // inositol phosphate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0071544 // diphosphoinositol polyphosphate catabolic process // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000287 // magnesium ion binding // inferred from direct assay /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052840 // inositol diphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052841 // inositol bisdiphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052842 // inositol diphosphate pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052843 // inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052844 // inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052845 // inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052846 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity // inferred from electronic annotation /// 0052847 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation /// 0052848 // inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation </td> <td> -4.27 </td> <td> 174.41 </td> <td> -0.19 </td> <td> 0.86 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201617_x_at </td> <td> 201617_x_at </td> <td> NM_004342 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004342.2 /DEF=Homo sapiens caldesmon 1 (CALD1), mRNA. /FEA=mRNA /GEN=CALD1 /PROD=caldesmon 1 /DB_XREF=gi:11091984 /UG=Hs.325474 caldesmon 1 /FL=gb:NM_004342.2 gb:M64110.1 </td> <td> NM_004342 </td> <td> caldesmon 1 </td> <td> CALD1 </td> <td> 800 </td> <td> NM_004342 /// NM_033138 /// NM_033139 /// NM_033140 /// NM_033157 /// XM_006716136 /// XM_006716137 /// XM_006716138 /// XM_006716139 </td> <td> 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030478 // actin cap // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation </td> <td> 8.45 </td> <td> 306.07 </td> <td> 0.18 </td> <td> 0.86 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212338_at </td> <td> 212338_at </td> <td> AA621962 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AA621962 /FEA=EST /DB_XREF=gi:2525838 /DB_XREF=est:nq24b02.s1 /CLONE=IMAGE:1144779 /UG=Hs.39871 KIAA0727 protein </td> <td> AA621962 </td> <td> myosin ID </td> <td> MYO1D </td> <td> 4642 </td> <td> NM_015194 </td> <td> 0006200 // ATP catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0061502 // early endosome to recycling endosome transport // inferred from sequence or structural similarity </td> <td> 0005768 // endosome // inferred from sequence or structural similarity /// 0005790 // smooth endoplasmic reticulum // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030673 // axolemma // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000146 // microfilament motor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0030898 // actin-dependent ATPase activity // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation </td> <td> -3.10 </td> <td> 148.78 </td> <td> -0.18 </td> <td> 0.86 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 214042_s_at </td> <td> 214042_s_at </td> <td> AW071997 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AW071997 /FEA=EST /DB_XREF=gi:6026995 /DB_XREF=est:ws57f09.x1 /CLONE=IMAGE:2501321 /UG=Hs.326249 Homo sapiens mRNA; cDNA DKFZp586E0524 (from clone DKFZp586E0524) </td> <td> AW071997 </td> <td> ribosomal protein L22 </td> <td> RPL22 </td> <td> 6146 </td> <td> NM_000983 </td> <td> 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral life cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -8.22 </td> <td> 591.99 </td> <td> -0.18 </td> <td> 0.86 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218030_at </td> <td> 218030_at </td> <td> NM_014030 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014030.1 /DEF=Homo sapiens G protein-coupled receptor kinase-interactor 1 (GIT1), mRNA.  /FEA=mRNA /GEN=GIT1 /PROD=G protein-coupled receptor kinase-interactor 1 /DB_XREF=gi:7661711 /UG=Hs.318339 G protein-coupled receptor kinase-interactor 1 /FL=gb:AF124490.1 gb:NM_014030.1 </td> <td> NM_014030 </td> <td> G protein-coupled receptor kinase interacting ArfGAP 1 </td> <td> GIT1 </td> <td> 28964 </td> <td> NM_001085454 /// NM_014030 </td> <td> 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -4.47 </td> <td> 124.11 </td> <td> -0.18 </td> <td> 0.86 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201765_s_at </td> <td> 201765_s_at </td> <td> AL523158 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL523158 /FEA=EST /DB_XREF=gi:12786651 /DB_XREF=est:AL523158 /CLONE=CS0DC001YM06 (3 prime) /UG=Hs.119403 hexosaminidase A (alpha polypeptide) /FL=gb:NM_000520.2 </td> <td> AL523158 </td> <td> hexosaminidase A (alpha polypeptide) </td> <td> HEXA </td> <td> 3073 </td> <td> NM_000520 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0006689 // ganglioside catabolic process // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0019915 // lipid storage // inferred from electronic annotation /// 0019953 // sexual reproduction // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030207 // chondroitin sulfate catabolic process // traceable author statement /// 0030212 // hyaluronan metabolic process // traceable author statement /// 0030214 // hyaluronan catabolic process // traceable author statement /// 0042339 // keratan sulfate metabolic process // traceable author statement /// 0042340 // keratan sulfate catabolic process // traceable author statement /// 0042552 // myelination // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0050884 // neuromuscular process controlling posture // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation </td> <td> 0005764 // lysosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004563 // beta-N-acetylhexosaminidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay </td> <td> -3.33 </td> <td> 164.54 </td> <td> -0.18 </td> <td> 0.86 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 219807_x_at </td> <td> 219807_x_at </td> <td> NM_016154 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016154.1 /DEF=Homo sapiens ras-related GTP-binding protein 4b (RAB4B), mRNA. /FEA=mRNA /GEN=RAB4B /PROD=ras-related GTP-binding protein 4b /DB_XREF=gi:7706672 /UG=Hs.279771 Homo sapiens TR00071289_m (RAB4B), mRNA /FL=gb:AF165522.1 gb:NM_016154.1 </td> <td> NM_016154 </td> <td> MIA-RAB4B readthrough (NMD candidate) /// RAB4B, member RAS oncogene family </td> <td> MIA-RAB4B /// RAB4B </td> <td> 53916 /// 100529262 </td> <td> NM_016154 /// NR_037775 </td> <td> 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0046323 // glucose import // inferred from mutant phenotype </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032593 // insulin-responsive compartment // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 3.27 </td> <td> 43.34 </td> <td> 0.18 </td> <td> 0.86 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218950_at </td> <td> 218950_at </td> <td> NM_022481 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_022481.1 /DEF=Homo sapiens hypothetical protein FLJ21065 (FLJ21065), mRNA. /FEA=mRNA /GEN=FLJ21065 /PROD=hypothetical protein FLJ21065 /DB_XREF=gi:11968032 /UG=Hs.25277 hypothetical protein FLJ21065 /FL=gb:NM_022481.1 </td> <td> NM_022481 </td> <td> ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 </td> <td> ARAP3 </td> <td> 64411 </td> <td> NM_022481 /// XM_005268497 /// XM_005268498 /// XM_005268499 /// XM_005268500 /// XM_006714791 /// XM_006714792 /// XM_006714793 </td> <td> 0007010 // cytoskeleton organization // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // traceable author statement /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0035024 // negative regulation of Rho protein signal transduction // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement </td> <td> 0001726 // ruffle // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred by curator /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation </td> <td> 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0008060 // ARF GTPase activator activity // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030675 // Rac GTPase activator activity // inferred from sequence or structural similarity /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 3.95 </td> <td> 253.72 </td> <td> 0.18 </td> <td> 0.86 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212959_s_at </td> <td> 212959_s_at </td> <td> AK001821 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK001821.1 /DEF=Homo sapiens cDNA FLJ10959 fis, clone PLACE1000562. /FEA=mRNA /DB_XREF=gi:7023328 /UG=Hs.7041 hypothetical protein DKFZp762B226 </td> <td> AK001821 </td> <td> N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits </td> <td> GNPTAB </td> <td> 79158 </td> <td> NM_024312 /// XM_006719593 </td> <td> 0007040 // lysosome organization // inferred from mutant phenotype /// 0009306 // protein secretion // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0046835 // carbohydrate phosphorylation // inferred from direct assay </td> <td> 0000139 // Golgi membrane // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003976 // UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 4.78 </td> <td> 163.81 </td> <td> 0.18 </td> <td> 0.86 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218193_s_at </td> <td> 218193_s_at </td> <td> NM_016072 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016072.1 /DEF=Homo sapiens CGI-141 protein (LOC51026), mRNA. /FEA=mRNA /GEN=LOC51026 /PROD=CGI-141 protein /DB_XREF=gi:7705635 /UG=Hs.62275 CGI-141 protein /FL=gb:AF151899.1 gb:AL136571.1 gb:NM_016072.1 </td> <td> NM_016072 </td> <td> golgi transport 1B </td> <td> GOLT1B </td> <td> 51026 </td> <td> NM_016072 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype </td> <td> -6.12 </td> <td> 228.74 </td> <td> -0.17 </td> <td> 0.87 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201807_at </td> <td> 201807_at </td> <td> NM_004896 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004896.1 /DEF=Homo sapiens vacuolar protein sorting 26 (yeast homolog) (VPS26), mRNA.  /FEA=mRNA /GEN=VPS26 /PROD=vacuolar protein sorting 26 (yeast homolog) /DB_XREF=gi:4758509 /UG=Hs.67052 vacuolar protein sorting 26 (yeast homolog) /FL=gb:AF054179.1 gb:NM_004896.1 gb:AF175266.1 </td> <td> NM_004896 </td> <td> vacuolar protein sorting 26 homolog A (S. pombe) </td> <td> VPS26A </td> <td> 9559 </td> <td> NM_001035260 /// NM_004896 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0007034 // vacuolar transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // non-traceable author statement </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030904 // retromer complex // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // non-traceable author statement </td> <td> -4.18 </td> <td> 487.06 </td> <td> -0.17 </td> <td> 0.87 </td> <td> 0.89 </td> <td> -4.62 </td> </tr>
  <tr> <td> 204482_at </td> <td> 204482_at </td> <td> NM_003277 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003277.1 /DEF=Homo sapiens claudin 5 (transmembrane protein deleted in velocardiofacial syndrome) (CLDN5), mRNA.  /FEA=mRNA /GEN=CLDN5 /PROD=transmembrane protein claudin 5 /DB_XREF=gi:4502878 /UG=Hs.110903 claudin 5 (transmembrane protein deleted in velocardiofacial syndrome) /FL=gb:BC002404.1 gb:AF000959.1 gb:NM_003277.1 </td> <td> NM_003277 </td> <td> claudin 5 </td> <td> CLDN5 </td> <td> 7122 </td> <td> NM_001130861 /// NM_003277 /// XM_005261272 </td> <td> 0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0042552 // myelination // inferred from electronic annotation </td> <td> 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0033270 // paranode region of axon // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity </td> <td> -7.70 </td> <td> 183.58 </td> <td> -0.17 </td> <td> 0.87 </td> <td> 0.90 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212724_at </td> <td> 212724_at </td> <td> BG054844 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG054844 /FEA=EST /DB_XREF=gi:12511973 /DB_XREF=est:nac90f11.x1 /CLONE=IMAGE:3441573 /UG=Hs.6838 ras homolog gene family, member E /FL=gb:NM_005168.1 </td> <td> BG054844 </td> <td> Rho family GTPase 3 </td> <td> RND3 </td> <td> 390 </td> <td> NM_001254738 /// NM_005168 </td> <td> 0006184 // GTP catabolic process // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // traceable author statement </td> <td> 0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation </td> <td> 8.98 </td> <td> 852.94 </td> <td> 0.17 </td> <td> 0.87 </td> <td> 0.90 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217419_x_at </td> <td> 217419_x_at </td> <td> AK021586 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AK021586.1 /DEF=Homo sapiens cDNA FLJ11524 fis, clone HEMBA1002547, highly similar to Homo sapiens agrin precursor mRNA.  /FEA=mRNA /DB_XREF=gi:10432794 /UG=Hs.273330 Homo sapiens, clone IMAGE:3506210, mRNA, partial cds </td> <td> AK021586 </td> <td> agrin </td> <td> AGRN </td> <td> 375790 </td> <td> NM_198576 /// XM_005244749 /// XM_006710633 /// XM_006710634 /// XM_006710635 /// XM_006710636 /// XM_006710637 </td> <td> 0001523 // retinoid metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006027 // glycosaminoglycan catabolic process // traceable author statement /// 0007009 // plasma membrane organization // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007268 // synaptic transmission // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007528 // neuromuscular junction development // inferred from electronic annotation /// 0007603 // phototransduction, visible light // traceable author statement /// 0008582 // regulation of synaptic growth at neuromuscular junction // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0043113 // receptor clustering // inferred from direct assay /// 0043113 // receptor clustering // inferred from mutant phenotype /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045162 // clustering of voltage-gated sodium channels // traceable author statement /// 0045213 // neurotransmitter receptor metabolic process // inferred from electronic annotation /// 0045887 // positive regulation of synaptic growth at neuromuscular junction // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0050808 // synapse organization // traceable author statement /// 0051491 // positive regulation of filopodium assembly // inferred from sequence or structural similarity </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005605 // basal lamina // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // traceable author statement /// 0043202 // lysosomal lumen // traceable author statement /// 0045202 // synapse // inferred from sequence or structural similarity /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0002162 // dystroglycan binding // inferred from sequence or structural similarity /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0030548 // acetylcholine receptor regulator activity // inferred from electronic annotation /// 0033691 // sialic acid binding // inferred from sequence or structural similarity /// 0035374 // chondroitin sulfate binding // inferred from sequence or structural similarity /// 0043236 // laminin binding // traceable author statement /// 0043395 // heparan sulfate proteoglycan binding // inferred from sequence or structural similarity </td> <td> -3.83 </td> <td> 163.44 </td> <td> -0.17 </td> <td> 0.87 </td> <td> 0.90 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211573_x_at </td> <td> 211573_x_at </td> <td> M98478 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M98478.1 /DEF=Human transglutaminase mRNA, complete cds. /FEA=mRNA /PROD=transglutaminase /DB_XREF=gi:339577 /UG=Hs.8265 transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) /FL=gb:M98478.1 </td> <td> M98478 </td> <td> transglutaminase 2 </td> <td> TGM2 </td> <td> 7052 </td> <td> NM_004613 /// NM_198951 </td> <td> 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0018149 // peptide cross-linking // inferred from electronic annotation /// 0018153 // isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine // inferred from electronic annotation /// 0032471 // negative regulation of endoplasmic reticulum calcium ion concentration // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from sequence or structural similarity /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051482 // positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0051561 // positive regulation of mitochondrial calcium ion concentration // inferred from mutant phenotype /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060662 // salivary gland cavitation // inferred from electronic annotation </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from mutant phenotype /// 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -4.07 </td> <td> 211.76 </td> <td> -0.17 </td> <td> 0.87 </td> <td> 0.90 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209181_s_at </td> <td> 209181_s_at </td> <td> U49245 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U49245.1 /DEF=Human geranylgeranyl transferase type II beta-subunit mRNA, complete cds.  /FEA=mRNA /PROD=geranylgeranyl transferase type II beta-subunit /DB_XREF=gi:1216503 /UG=Hs.78948 Rab geranylgeranyltransferase, beta subunit /FL=gb:U49245.1 gb:NM_004582.1 </td> <td> U49245 </td> <td> Rab geranylgeranyltransferase, beta subunit /// small nucleolar RNA, C/D box 45A /// small nucleolar RNA, C/D box 45B /// small nucleolar RNA, C/D box 45C </td> <td> RABGGTB /// SNORD45A /// SNORD45B /// SNORD45C </td> <td> 5876 /// 26804 /// 26805 /// 692085 </td> <td> NM_004582 /// NR_002748 /// NR_002749 /// NR_003042 /// NR_073562 </td> <td> 0006464 // cellular protein modification process // non-traceable author statement /// 0007601 // visual perception // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0018344 // protein geranylgeranylation // inferred from sequence or structural similarity </td> <td> 0005968 // Rab-protein geranylgeranyltransferase complex // inferred from sequence or structural similarity </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004659 // prenyltransferase activity // inferred from electronic annotation /// 0004663 // Rab geranylgeranyltransferase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0016740 // transferase activity // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> 5.27 </td> <td> 384.36 </td> <td> 0.17 </td> <td> 0.87 </td> <td> 0.90 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210042_s_at </td> <td> 210042_s_at </td> <td> AF073890 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF073890.1 /DEF=Homo sapiens cathepsin X precursor, mRNA, complete cds. /FEA=mRNA /PROD=cathepsin X precursor /DB_XREF=gi:3650497 /UG=Hs.252549 cathepsin Z /FL=gb:AF032906.1 gb:AF073890.1 gb:NM_001336.1 gb:AF136273.1 </td> <td> AF073890 </td> <td> cathepsin Z </td> <td> CTSZ </td> <td> 1522 </td> <td> NM_001336 </td> <td> 0002003 // angiotensin maturation // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0060441 // epithelial tube branching involved in lung morphogenesis // inferred from electronic annotation </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 9.48 </td> <td> 83.99 </td> <td> 0.16 </td> <td> 0.88 </td> <td> 0.90 </td> <td> -4.62 </td> </tr>
  <tr> <td> 204716_at </td> <td> 204716_at </td> <td> NM_005436 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005436.1 /DEF=Homo sapiens DNA segment, single copy, probe pH4 (transforming sequence, thyroid-1, (D10S170), mRNA.  /FEA=mRNA /GEN=D10S170 /PROD=DNA segment, single copy, probe pH4(transforming sequence, thyroid-1, /DB_XREF=gi:4885172 /UG=Hs.315591 DNA segment, single copy, probe pH4 (transforming sequence, thyroid-1, /FL=gb:NM_005436.1 </td> <td> NM_005436 </td> <td> coiled-coil domain containing 6 </td> <td> CCDC6 </td> <td> 8030 </td> <td> NM_005436 </td> <td>  </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation </td> <td> 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation </td> <td> 3.25 </td> <td> 121.05 </td> <td> 0.16 </td> <td> 0.88 </td> <td> 0.90 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202213_s_at </td> <td> 202213_s_at </td> <td> AI650819 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI650819 /FEA=EST /DB_XREF=gi:4734798 /DB_XREF=est:wa95a10.x1 /CLONE=IMAGE:2303898 /UG=Hs.155976 cullin 4B /FL=gb:NM_003588.1 gb:AB014595.1 </td> <td> AI650819 </td> <td> cullin 4B </td> <td> CUL4B </td> <td> 8450 </td> <td> NM_001079872 /// NM_003588 /// XM_005262481 /// XM_006724784 /// XM_006724785 </td> <td> 0006281 // DNA repair // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0070914 // UV-damage excision repair // inferred from direct assay /// 1900087 // positive regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from electronic annotation /// 0031465 // Cul4B-RING E3 ubiquitin ligase complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003684 // damaged DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation </td> <td> -3.65 </td> <td> 238.12 </td> <td> -0.16 </td> <td> 0.88 </td> <td> 0.90 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212345_s_at </td> <td> 212345_s_at </td> <td> BE675139 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE675139 /FEA=EST /DB_XREF=gi:10035680 /DB_XREF=est:7f03b12.x1 /CLONE=IMAGE:3293567 /UG=Hs.13659 hypothetical protein DKFZp586F2423 </td> <td> BE675139 </td> <td> cAMP responsive element binding protein 3-like 2 </td> <td> CREB3L2 </td> <td> 64764 </td> <td> NM_001253775 /// NM_194071 /// XM_005250541 </td> <td> 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from expression pattern /// 0045893 // positive regulation of transcription, DNA-templated // inferred from direct assay /// 0051216 // cartilage development // inferred from sequence or structural similarity </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0035497 // cAMP response element binding // inferred from mutant phenotype /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from mutant phenotype </td> <td> -3.53 </td> <td> 293.86 </td> <td> -0.16 </td> <td> 0.88 </td> <td> 0.90 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200973_s_at </td> <td> 200973_s_at </td> <td> NM_005724 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005724.1 /DEF=Homo sapiens tetraspan 3 (TSPAN-3), mRNA. /FEA=mRNA /GEN=TSPAN-3 /PROD=tetraspan 3 /DB_XREF=gi:5032200 /UG=Hs.100090 tetraspan 3 /FL=gb:BC000704.1 gb:BC004280.1 gb:AF054840.1 gb:NM_005724.1 gb:AF133423.1 </td> <td> NM_005724 </td> <td> tetraspanin 3 </td> <td> TSPAN3 </td> <td> 10099 </td> <td> NM_001168412 /// NM_005724 /// NM_198902 </td> <td>  </td> <td> 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> 5.73 </td> <td> 341.16 </td> <td> 0.16 </td> <td> 0.88 </td> <td> 0.90 </td> <td> -4.62 </td> </tr>
  <tr> <td> 206792_x_at </td> <td> 206792_x_at </td> <td> NM_000923 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000923.1 /DEF=Homo sapiens phosphodiesterase 4C, cAMP-specific (dunce (Drosophila)-homolog phosphodiesterase E1) (PDE4C), mRNA.  /FEA=mRNA /GEN=PDE4C /PROD=phosphodiesterase 4C, cAMP-specific (dunce(Drosophila)-homolog phosphodiesterase E1) /DB_XREF=gi:4505664 /UG=Hs.189 phosphodiesterase 4C, cAMP-specific (dunce (Drosophila)-homolog phosphodiesterase E1) /FL=gb:NM_000923.1 </td> <td> NM_000923 </td> <td> uncharacterized LOC729966 /// phosphodiesterase 4C, cAMP-specific </td> <td> LOC729966 /// PDE4C </td> <td> 5143 /// 729966 </td> <td> NM_000923 /// NM_001098818 /// NM_001098819 /// NR_036575 /// NR_040546 </td> <td> 0006198 // cAMP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from sequence or structural similarity </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004112 // cyclic-nucleotide phosphodiesterase activity // non-traceable author statement /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // non-traceable author statement /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // traceable author statement /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -7.65 </td> <td> 206.62 </td> <td> -0.15 </td> <td> 0.88 </td> <td> 0.91 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200863_s_at </td> <td> 200863_s_at </td> <td> AI215102 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI215102 /FEA=EST /DB_XREF=gi:3778703 /DB_XREF=est:qg69g05.x1 /CLONE=IMAGE:1840472 /UG=Hs.75618 RAB11A, member RAS oncogene family /FL=gb:AF000231.1 gb:NM_004663.1 </td> <td> AI215102 </td> <td> RAB11A, member RAS oncogene family </td> <td> RAB11A </td> <td> 8766 </td> <td> NM_001206836 /// NM_004663 </td> <td> 0000910 // cytokinesis // inferred from mutant phenotype /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from direct assay /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0032402 // melanosome transport // inferred from sequence or structural similarity /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048227 // plasma membrane to endosome transport // non-traceable author statement /// 0051223 // regulation of protein transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0072659 // protein localization to plasma membrane // inferred from direct assay </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from sequence or structural similarity /// 0055038 // recycling endosome membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019905 // syntaxin binding // non-traceable author statement </td> <td> 4.53 </td> <td> 895.06 </td> <td> 0.15 </td> <td> 0.88 </td> <td> 0.91 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201345_s_at </td> <td> 201345_s_at </td> <td> NM_003339 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003339.1 /DEF=Homo sapiens ubiquitin-conjugating enzyme E2D 2 (homologous to yeast UBC45) (UBE2D2), mRNA.  /FEA=mRNA /GEN=UBE2D2 /PROD=ubiquitin-conjugating enzyme E2D 2 (homologousto yeast UBC45) /DB_XREF=gi:4507774 /UG=Hs.108332 ubiquitin-conjugating enzyme E2D 2 (homologous to yeast UBC45) /FL=gb:U39317.1 gb:NM_003339.1 </td> <td> NM_003339 </td> <td> ubiquitin-conjugating enzyme E2D 2 </td> <td> UBE2D2 </td> <td> 7322 </td> <td> NM_003339 /// NM_181838 </td> <td> 0000209 // protein polyubiquitination // inferred from direct assay /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0071456 // cellular response to hypoxia // traceable author statement </td> <td> 0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein transferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation </td> <td> -9.12 </td> <td> 425.09 </td> <td> -0.15 </td> <td> 0.88 </td> <td> 0.91 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200771_at </td> <td> 200771_at </td> <td> NM_002293 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002293.2 /DEF=Homo sapiens laminin, gamma 1 (formerly LAMB2) (LAMC1), mRNA. /FEA=mRNA /GEN=LAMC1 /PROD=laminin, gamma 1 precursor /DB_XREF=gi:9845497 /UG=Hs.214982 laminin, gamma 1 (formerly LAMB2) /FL=gb:J03202.1 gb:NM_002293.2 </td> <td> NM_002293 </td> <td> laminin, gamma 1 (formerly LAMB2) </td> <td> LAMC1 </td> <td> 3915 </td> <td> NM_002293 </td> <td> 0006461 // protein complex assembly // inferred from direct assay /// 0007155 // cell adhesion // inferred from direct assay /// 0007411 // axon guidance // traceable author statement /// 0007492 // endoderm development // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // inferred from mutant phenotype /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031581 // hemidesmosome assembly // inferred from mutant phenotype /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005605 // basal lamina // inferred from electronic annotation /// 0005606 // laminin-1 complex // non-traceable author statement /// 0005606 // laminin-1 complex // traceable author statement /// 0005615 // extracellular space // non-traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0043259 // laminin-10 complex // traceable author statement /// 0043260 // laminin-11 complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005201 // extracellular matrix structural constituent // inferred from mutant phenotype /// 0005515 // protein binding // inferred from electronic annotation /// 0043208 // glycosphingolipid binding // inferred from electronic annotation </td> <td> -3.55 </td> <td> 892.67 </td> <td> -0.15 </td> <td> 0.89 </td> <td> 0.91 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210154_at </td> <td> 210154_at </td> <td> M55905 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:M55905.1 /DEF=Human mitochondrial NAD(P)+ dependent malic enzyme mRNA, complete cds.  /FEA=mRNA /GEN=NAD(P)+ -dependent malic enzyme /PROD=mitochondrial NAD(P)+ -dependent malic enzyme /DB_XREF=gi:187299 /UG=Hs.75342 malic enzyme 2, NAD(+)-dependent, mitochondrial /FL=gb:NM_002396.2 gb:M55905.1 </td> <td> M55905 </td> <td> malic enzyme 2, NAD(+)-dependent, mitochondrial </td> <td> ME2 </td> <td> 4200 </td> <td> NM_001168335 /// NM_002396 </td> <td> 0006108 // malate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay </td> <td> 0003824 // catalytic activity // inferred from electronic annotation /// 0004470 // malic enzyme activity // inferred from electronic annotation /// 0004471 // malate dehydrogenase (decarboxylating) (NAD+) activity // inferred from electronic annotation /// 0008948 // oxaloacetate decarboxylase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation </td> <td> 3.40 </td> <td> 131.30 </td> <td> 0.15 </td> <td> 0.89 </td> <td> 0.91 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211454_x_at </td> <td> 211454_x_at </td> <td> AF336878 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF336878.1 /DEF=Homo sapiens FKSG51 (FKSG51) mRNA, complete cds. /FEA=mRNA /GEN=FKSG51 /PROD=FKSG51 /DB_XREF=gi:13384184 /UG=Hs.326752 Homo sapiens FKSG51 (FKSG51) mRNA, complete cds /FL=gb:AF336878.1 </td> <td> AF336878 </td> <td> FKSG49 </td> <td> FKSG49 </td> <td> 400949 </td> <td> XR_041698 </td> <td>  </td> <td>  </td> <td>  </td> <td> -5.80 </td> <td> 173.28 </td> <td> -0.15 </td> <td> 0.89 </td> <td> 0.91 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212845_at </td> <td> 212845_at </td> <td> AB028976 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AB028976.1 /DEF=Homo sapiens mRNA for KIAA1053 protein, partial cds. /FEA=mRNA /GEN=KIAA1053 /PROD=KIAA1053 protein /DB_XREF=gi:5689442 /UG=Hs.173571 KIAA1053 protein </td> <td> AB028976 </td> <td> sterile alpha motif domain containing 4A </td> <td> SAMD4A </td> <td> 23034 </td> <td> NM_001161576 /// NM_001161577 /// NM_015589 </td> <td> 0006417 // regulation of translation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from electronic annotation /// 0030371 // translation repressor activity // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 7.48 </td> <td> 323.39 </td> <td> 0.14 </td> <td> 0.89 </td> <td> 0.91 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200661_at </td> <td> 200661_at </td> <td> NM_000308 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000308.1 /DEF=Homo sapiens protective protein for beta-galactosidase (galactosialidosis) (PPGB), mRNA.  /FEA=mRNA /GEN=PPGB /PROD=protective protein for beta-galactosidase /DB_XREF=gi:4505988 /UG=Hs.118126 protective protein for beta-galactosidase (galactosialidosis) /FL=gb:BC000597.1 gb:M22960.1 gb:NM_000308.1 </td> <td> NM_000308 </td> <td> cathepsin A </td> <td> CTSA </td> <td> 5476 </td> <td> NM_000308 /// NM_001127695 /// NM_001167594 </td> <td> 0006508 // proteolysis // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0006886 // intracellular protein transport // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030239 // myofibril assembly // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // non-traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005927 // muscle tendon junction // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0030891 // VCB complex // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004180 // carboxypeptidase activity // traceable author statement /// 0004185 // serine-type carboxypeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 4.70 </td> <td> 292.57 </td> <td> 0.14 </td> <td> 0.89 </td> <td> 0.91 </td> <td> -4.62 </td> </tr>
  <tr> <td> 38487_at </td> <td> 38487_at </td> <td> D87433 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Cluster Incl. D87433:Human mRNA for KIAA0246 gene, partial cds /cds=(0,6639) /gb=D87433 /gi=1665760 /ug=Hs.84753 /len=6777 </td> <td> D87433 </td> <td> stabilin 1 </td> <td> STAB1 </td> <td> 23166 </td> <td> NM_015136 /// XM_005264973 /// XM_005264974 /// XM_005264975 /// XM_006713065 /// XM_006713066 /// XR_427261 </td> <td> 0006898 // receptor-mediated endocytosis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007267 // cell-cell signaling // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0042742 // defense response to bacterium // inferred from direct assay /// 0055114 // oxidation-reduction process // non-traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement </td> <td> 0005041 // low-density lipoprotein receptor activity // inferred from direct assay /// 0005044 // scavenger receptor activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // non-traceable author statement /// 0030169 // low-density lipoprotein particle binding // inferred from direct assay </td> <td> 6.85 </td> <td> 509.72 </td> <td> 0.14 </td> <td> 0.89 </td> <td> 0.91 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202226_s_at </td> <td> 202226_s_at </td> <td> NM_016823 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016823.1 /DEF=Homo sapiens v-crk avian sarcoma virus CT10 oncogene homolog (CRK), transcript variant II, mRNA.  /FEA=mRNA /GEN=CRK /PROD=v-crk avian sarcoma virus CT10 oncogene homologisoform a /DB_XREF=gi:8400705 /UG=Hs.306088 v-crk avian sarcoma virus CT10 oncogene homolog /FL=gb:D10656.1 gb:NM_016823.1 </td> <td> NM_016823 </td> <td> v-crk avian sarcoma virus CT10 oncogene homolog </td> <td> CRK </td> <td> 1398 </td> <td> NM_005206 /// NM_016823 </td> <td> 0000186 // activation of MAPKK activity // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from direct assay /// 0032956 // regulation of actin cytoskeleton organization // inferred from direct assay /// 0035020 // regulation of Rac protein signal transduction // inferred from electronic annotation /// 0038096 // Fc-gamma receptor signaling pathway involved in phagocytosis // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay </td> <td> 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred by curator /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from physical interaction /// 0045309 // protein phosphorylated amino acid binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction </td> <td> -3.78 </td> <td> 199.56 </td> <td> -0.14 </td> <td> 0.89 </td> <td> 0.91 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201594_s_at </td> <td> 201594_s_at </td> <td> NM_005134 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005134.1 /DEF=Homo sapiens protein phosphatase 4, regulatory subunit 1 (PPP4R1), mRNA.  /FEA=mRNA /GEN=PPP4R1 /PROD=protein phosphatase 4, regulatory subunit 1 /DB_XREF=gi:4826933 /UG=Hs.3382 protein phosphatase 4, regulatory subunit 1 /FL=gb:AF111106.1 gb:NM_005134.1 gb:AF100744.1 </td> <td> NM_005134 </td> <td> protein phosphatase 4, regulatory subunit 1 </td> <td> PPP4R1 </td> <td> 9989 </td> <td> NM_001042388 /// NM_005134 /// NR_052003 /// XR_430048 </td> <td> 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0007165 // signal transduction // non-traceable author statement /// 0016311 // dephosphorylation // inferred from sequence or structural similarity /// 0050790 // regulation of catalytic activity // non-traceable author statement </td> <td> 0030289 // protein phosphatase 4 complex // inferred from sequence or structural similarity </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from sequence or structural similarity /// 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030362 // protein phosphatase type 4 regulator activity // non-traceable author statement </td> <td> 4.02 </td> <td> 501.54 </td> <td> 0.14 </td> <td> 0.89 </td> <td> 0.91 </td> <td> -4.62 </td> </tr>
  <tr> <td> 218297_at </td> <td> 218297_at </td> <td> NM_024948 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_024948.1 /DEF=Homo sapiens hypothetical protein FLJ13397 (FLJ13397), mRNA. /FEA=mRNA /GEN=FLJ13397 /PROD=hypothetical protein FLJ13397 /DB_XREF=gi:13376430 /UG=Hs.285107 hypothetical protein FLJ13397 /FL=gb:AF063600.1 gb:NM_024948.1 </td> <td> NM_024948 </td> <td> family with sequence similarity 188, member A </td> <td> FAM188A </td> <td> 80013 </td> <td> NM_024948 /// XM_005252598 /// XM_005252600 /// XM_005252601 /// XM_005252602 /// XM_006717508 /// XR_428647 </td> <td> 0006915 // apoptotic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> -4.65 </td> <td> 115.20 </td> <td> -0.14 </td> <td> 0.89 </td> <td> 0.92 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203396_at </td> <td> 203396_at </td> <td> NM_002789 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002789.1 /DEF=Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 4 (PSMA4), mRNA.  /FEA=mRNA /GEN=PSMA4 /PROD=proteasome (prosome, macropain) subunit, alphatype, 4 /DB_XREF=gi:4506184 /UG=Hs.251531 proteasome (prosome, macropain) subunit, alpha type, 4 /FL=gb:BC005361.1 gb:NM_002789.1 </td> <td> NM_002789 </td> <td> proteasome (prosome, macropain) subunit, alpha type, 4 </td> <td> PSMA4 </td> <td> 5685 </td> <td> NM_001102667 /// NM_001102668 /// NM_002789 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> 5.60 </td> <td> 623.08 </td> <td> 0.14 </td> <td> 0.90 </td> <td> 0.92 </td> <td> -4.62 </td> </tr>
  <tr> <td> 214080_x_at </td> <td> 214080_x_at </td> <td> AI815793 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI815793 /FEA=EST /DB_XREF=gi:5431339 /DB_XREF=est:au42d05.x1 /CLONE=IMAGE:2517417 /UG=Hs.1432 protein kinase C substrate 80K-H </td> <td> AI815793 </td> <td> protein kinase C substrate 80K-H </td> <td> PRKCSH </td> <td> 5589 </td> <td> NM_001001329 /// NM_001289102 /// NM_001289103 /// NM_001289104 /// NM_002743 /// XM_006722795 /// XM_006722796 /// XM_006722797 /// XM_006722798 /// XR_430144 </td> <td> 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0006491 // N-glycan processing // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0072001 // renal system development // inferred from electronic annotation </td> <td> 0005622 // intracellular // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement </td> <td> 0003723 // RNA binding // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from physical interaction </td> <td> -4.00 </td> <td> 389.02 </td> <td> -0.14 </td> <td> 0.90 </td> <td> 0.92 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200638_s_at </td> <td> 200638_s_at </td> <td> BC003623 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC003623.1 /DEF=Homo sapiens, tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, zeta polypeptide, clone MGC:2153, mRNA, complete cds.  /FEA=mRNA /PROD=tyrosine 3-monooxygenasetryptophan5-monooxygenase activation protein, zeta polypeptide /DB_XREF=gi:13177678 /UG=Hs.75103 tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, zeta polypeptide /FL=gb:BC003623.1 gb:M86400.1 gb:NM_003406.1 gb:U28964.1 </td> <td> BC003623 </td> <td> tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta </td> <td> YWHAZ </td> <td> 7534 </td> <td> NM_001135699 /// NM_001135700 /// NM_001135701 /// NM_001135702 /// NM_003406 /// NM_145690 /// XM_005251060 /// XM_005251061 /// XM_005251062 /// XM_005251063 </td> <td> 0002553 // histamine secretion by mast cell // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010941 // regulation of cell death // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042629 // mast cell granule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay /// 0072562 // blood microparticle // inferred from direct assay </td> <td> 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 9.07 </td> <td> 1053.91 </td> <td> 0.14 </td> <td> 0.90 </td> <td> 0.92 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210186_s_at </td> <td> 210186_s_at </td> <td> BC005147 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC005147.1 /DEF=Homo sapiens, FK506-binding protein 1A (12kD), clone MGC:2167, mRNA, complete cds.  /FEA=mRNA /PROD=FK506-binding protein 1A (12kD) /DB_XREF=gi:13477342 /UG=Hs.752 FK506-binding protein 1A (12kD) /FL=gb:BC005147.1 </td> <td> BC005147 </td> <td> FK506 binding protein 1A, 12kDa /// uncharacterized LOC101929368 </td> <td> FKBP1A /// LOC101929368 </td> <td> 2280 /// 101929368 </td> <td> NM_000801 /// NM_001199786 /// NM_054014 /// XR_245428 /// XR_247917 /// XR_253167 </td> <td> 0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0006457 // protein folding // non-traceable author statement /// 0006458 // 'de novo' protein folding // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0018208 // peptidyl-proline modification //  /// 0022417 // protein maturation by protein folding // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0032513 // negative regulation of protein phosphatase type 2B activity // inferred from direct assay /// 0032880 // regulation of protein localization // inferred from genetic interaction /// 0032925 // regulation of activin receptor signaling pathway // inferred from direct assay /// 0034205 // beta-amyloid formation // inferred from direct assay /// 0042026 // protein refolding // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from mutant phenotype /// 0043206 // extracellular fibril organization // inferred from direct assay /// 0050776 // regulation of immune response // inferred from mutant phenotype /// 0051280 // negative regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0060347 // heart trabecula formation // inferred from sequence or structural similarity /// 0061077 // chaperone-mediated protein folding // not recorded /// 0070588 // calcium ion transmembrane transport // non-traceable author statement /// 1902991 // regulation of amyloid precursor protein catabolic process // inferred from genetic interaction /// 1990000 // amyloid fibril formation // inferred from direct assay </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0014802 // terminal cisterna // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from direct assay /// 0030018 // Z disc // inferred from direct assay /// 0030424 // axon //  /// 0033017 // sarcoplasmic reticulum membrane //  /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005024 // transforming growth factor beta-activated receptor activity // traceable author statement /// 0005160 // transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0005219 // ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005527 // macrolide binding // non-traceable author statement /// 0005528 // FK506 binding // inferred from direct assay /// 0005528 // FK506 binding // non-traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0019855 // calcium channel inhibitor activity // inferred from direct assay /// 0034713 // type I transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0044325 // ion channel binding // inferred from sequence or structural similarity /// 0046332 // SMAD binding // inferred from physical interaction /// 0048185 // activin binding // inferred from physical interaction </td> <td> 11.13 </td> <td> 837.89 </td> <td> 0.13 </td> <td> 0.90 </td> <td> 0.92 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212552_at </td> <td> 212552_at </td> <td> BE617588 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BE617588 /FEA=EST /DB_XREF=gi:9888526 /DB_XREF=est:601441509T1 /CLONE=IMAGE:3845643 /UG=Hs.3618 hippocalcin-like 1 </td> <td> BE617588 </td> <td> hippocalcin-like 1 </td> <td> HPCAL1 </td> <td> 3241 </td> <td> NM_001258357 /// NM_001258358 /// NM_001258359 /// NM_002149 /// NM_134421 /// XM_005246160 /// XM_005246161 /// XM_005246162 /// XM_005246163 /// XM_006711885 /// XR_426955 </td> <td> 0007165 // signal transduction // inferred from electronic annotation </td> <td> 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -4.63 </td> <td> 344.04 </td> <td> -0.13 </td> <td> 0.90 </td> <td> 0.92 </td> <td> -4.62 </td> </tr>
  <tr> <td> 202840_at </td> <td> 202840_at </td> <td> NM_003487 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_003487.1 /DEF=Homo sapiens TATA box binding protein (TBP)-associated factor, RNA polymerase II, N, 68kD (RNA-binding protein 56) (TAF2N), mRNA.  /FEA=mRNA /GEN=TAF2N /PROD=TATA box binding protein (TBP)-associatedfactor, RNA polymerase II, N, 68kD (RNA-binding protein56) /DB_XREF=gi:4507352 /UG=Hs.66772 TATA box binding protein (TBP)-associated factor, RNA polymerase II, N, 68kD (RNA-binding protein 56) /FL=gb:U51334.1 gb:NM_003487.1 </td> <td> NM_003487 </td> <td> TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa </td> <td> TAF15 </td> <td> 8148 </td> <td> NM_003487 /// NM_139215 </td> <td> 0045893 // positive regulation of transcription, DNA-templated // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -3.28 </td> <td> 60.04 </td> <td> -0.13 </td> <td> 0.90 </td> <td> 0.92 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200096_s_at </td> <td> 200096_s_at </td> <td> AI862255 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI862255 /FEA=EST /DB_XREF=gi:5526362 /DB_XREF=est:tb77d10.x1 /CLONE=IMAGE:2060371 /UG=Hs.24322 ATPase, H+ transporting, lysosomal (vacuolar proton pump) 9kD </td> <td> AI862255 </td> <td> ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 </td> <td> ATP6V0E1 </td> <td> 8992 </td> <td> NM_003945 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0016049 // cell growth // inferred from genetic interaction /// 0033572 // transferrin transport // traceable author statement /// 0043200 // response to amino acid // inferred from electronic annotation /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation </td> <td> 0005215 // transporter activity // non-traceable author statement /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042625 // ATPase activity, coupled to transmembrane movement of ions // inferred from sequence or structural similarity /// 0046961 // proton-transporting ATPase activity, rotational mechanism // traceable author statement </td> <td> 6.15 </td> <td> 758.67 </td> <td> 0.13 </td> <td> 0.90 </td> <td> 0.92 </td> <td> -4.62 </td> </tr>
  <tr> <td> 219966_x_at </td> <td> 219966_x_at </td> <td> NM_017869 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_017869.1 /DEF=Homo sapiens BANP homolog, SMAR1 homolog (FLJ20538), mRNA. /FEA=mRNA /GEN=FLJ20538 /PROD=BANP homolog, SMAR1 homolog /DB_XREF=gi:8923506 /UG=Hs.194637 BANP homolog, SMAR1 homolog /FL=gb:NM_017869.1 </td> <td> NM_017869 </td> <td> BTG3 associated nuclear protein </td> <td> BANP </td> <td> 54971 </td> <td> NM_001173539 /// NM_001173540 /// NM_001173541 /// NM_001173542 /// NM_001173543 /// NM_017869 /// NM_079837 /// XM_005256008 /// XM_005256009 /// XM_005256010 /// XM_005256012 /// XM_006721213 /// XM_006721214 /// XM_006721215 /// XM_006721216 /// XM_006721217 /// XM_006721218 /// XM_006721219 /// XM_006721220 /// XM_006721221 /// XM_006721222 /// XM_006721223 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from electronic annotation </td> <td> 0002039 // p53 binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction </td> <td> 3.05 </td> <td> 143.12 </td> <td> 0.13 </td> <td> 0.90 </td> <td> 0.92 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209253_at </td> <td> 209253_at </td> <td> AF037261 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF037261.1 /DEF=Homo sapiens SH3-containing adaptor molecule-1 mRNA, complete cds. /FEA=mRNA /PROD=SH3-containing adaptor molecule-1 /DB_XREF=gi:3004947 /UG=Hs.33787 vinexin beta (SH3-containing adaptor molecule-1) /FL=gb:AF037261.1 </td> <td> AF037261 </td> <td> sorbin and SH3 domain containing 3 </td> <td> SORBS3 </td> <td> 10174 </td> <td> NM_001018003 /// NM_005775 /// XM_005273370 /// XM_005273371 /// XM_006716266 /// XM_006716267 /// XM_006716268 /// XM_006716269 /// XM_006716270 /// XM_006716271 /// XR_428299 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0031589 // cell-substrate adhesion // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0051495 // positive regulation of cytoskeleton organization // non-traceable author statement /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation </td> <td> 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction </td> <td> -3.70 </td> <td> 84.15 </td> <td> -0.13 </td> <td> 0.90 </td> <td> 0.92 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211043_s_at </td> <td> 211043_s_at </td> <td> BC006332 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC006332.1 /DEF=Homo sapiens, clathrin, light polypeptide (Lcb), clone MGC:12930, mRNA, complete cds.  /FEA=mRNA /PROD=clathrin, light polypeptide (Lcb) /DB_XREF=gi:13623458 /FL=gb:BC006332.1 </td> <td> BC006332 </td> <td> clathrin, light chain B </td> <td> CLTB </td> <td> 1212 </td> <td> NM_001834 /// NM_007097 /// NR_045724 /// XM_006714818 </td> <td> 0006886 // intracellular protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation </td> <td> 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from sequence or structural similarity /// 0030118 // clathrin coat // non-traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // inferred from electronic annotation /// 0030132 // clathrin coat of coated pit // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0060170 // ciliary membrane // inferred from electronic annotation </td> <td> 0000287 // magnesium ion binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042277 // peptide binding // inferred from electronic annotation </td> <td> 3.80 </td> <td> 228.07 </td> <td> 0.13 </td> <td> 0.90 </td> <td> 0.92 </td> <td> -4.62 </td> </tr>
  <tr> <td> 213875_x_at </td> <td> 213875_x_at </td> <td> BG252842 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BG252842 /FEA=EST /DB_XREF=gi:12762658 /DB_XREF=est:602365421F1 /CLONE=IMAGE:4473701 /UG=Hs.173685 hypothetical protein FLJ12619 </td> <td> BG252842 </td> <td> chromosome 6 open reading frame 62 </td> <td> C6orf62 </td> <td> 81688 </td> <td> NM_030939 /// XM_005249433 </td> <td>  </td> <td> 0005622 // intracellular // inferred from direct assay </td> <td>  </td> <td> -3.97 </td> <td> 181.24 </td> <td> -0.13 </td> <td> 0.90 </td> <td> 0.92 </td> <td> -4.62 </td> </tr>
  <tr> <td> 221495_s_at </td> <td> 221495_s_at </td> <td> AF322111 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF322111.1 /DEF=Homo sapiens FKSG26 mRNA, complete cds. /FEA=mRNA /PROD=FKSG26 /DB_XREF=gi:12276139 /UG=Hs.227835 KIAA1049 protein /FL=gb:AF322111.1 gb:BC000959.1 </td> <td> AF322111 </td> <td> transcription factor 25 (basic helix-loop-helix) </td> <td> TCF25 </td> <td> 22980 </td> <td> NM_014972 /// XM_005256297 /// XM_005256298 /// XM_005256299 /// XM_005256300 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007507 // heart development // non-traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction </td> <td> -4.10 </td> <td> 372.10 </td> <td> -0.12 </td> <td> 0.90 </td> <td> 0.92 </td> <td> -4.62 </td> </tr>
  <tr> <td> 206247_at </td> <td> 206247_at </td> <td> NM_005931 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005931.1 /DEF=Homo sapiens MHC class I polypeptide-related sequence B (MICB), mRNA.  /FEA=mRNA /GEN=MICB /PROD=MHC class I polypeptide-related sequence B /DB_XREF=gi:5174564 /UG=Hs.211580 MHC class I polypeptide-related sequence B /FL=gb:NM_005931.1 </td> <td> NM_005931 </td> <td> MHC class I polypeptide-related sequence B </td> <td> MICB </td> <td> 4277 </td> <td> NM_001289160 /// NM_001289161 /// NM_005931 /// XM_006726002 /// XM_006726095 </td> <td> 0001913 // T cell mediated cytotoxicity // not recorded /// 0002376 // immune system process // inferred from electronic annotation /// 0002429 // immune response-activating cell surface receptor signaling pathway // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from direct assay /// 0009408 // response to heat // inferred from direct assay /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0019835 // cytolysis // inferred from electronic annotation /// 0019882 // antigen processing and presentation // not recorded /// 0032526 // response to retinoic acid // inferred from direct assay /// 0042267 // natural killer cell mediated cytotoxicity // not recorded /// 0046629 // gamma-delta T cell activation // inferred from direct assay /// 0050689 // negative regulation of defense response to virus by host // inferred from direct assay /// 0050776 // regulation of immune response // traceable author statement </td> <td> 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0003823 // antigen binding // not recorded /// 0005515 // protein binding // inferred from electronic annotation /// 0030881 // beta-2-microglobulin binding // not recorded /// 0046703 // natural killer cell lectin-like receptor binding // inferred from direct assay </td> <td> -3.95 </td> <td> 157.68 </td> <td> -0.12 </td> <td> 0.91 </td> <td> 0.93 </td> <td> -4.62 </td> </tr>
  <tr> <td> 214709_s_at </td> <td> 214709_s_at </td> <td> Z22551 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:Z22551.1 /DEF=H.sapiens kinectin gene. /FEA=mRNA /GEN=kinectin /PROD=156 kDa Protein /DB_XREF=gi:296163 /UG=Hs.211577 kinectin 1 (kinesin receptor) </td> <td> Z22551 </td> <td> kinectin 1 (kinesin receptor) </td> <td> KTN1 </td> <td> 3895 </td> <td> NM_001079521 /// NM_001079522 /// NM_001271014 /// NM_004986 /// NM_182926 /// NR_073128 /// NR_073129 /// XM_006720138 /// XM_006720139 /// XM_006720140 /// XM_006720141 </td> <td> 0007018 // microtubule-based movement // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral component of membrane // traceable author statement /// 0030176 // integral component of endoplasmic reticulum membrane // inferred from electronic annotation </td> <td> 0019894 // kinesin binding // inferred from electronic annotation /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 5.50 </td> <td> 490.93 </td> <td> 0.12 </td> <td> 0.91 </td> <td> 0.93 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200637_s_at </td> <td> 200637_s_at </td> <td> AI762627 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI762627 /FEA=EST /DB_XREF=gi:5178294 /DB_XREF=est:wi56g01.x1 /CLONE=IMAGE:2394288 /UG=Hs.75216 protein tyrosine phosphatase, receptor type, F /FL=gb:NM_002840.1 </td> <td> AI762627 </td> <td> protein tyrosine phosphatase, receptor type, F </td> <td> PTPRF </td> <td> 5792 </td> <td> NM_002840 /// NM_130440 /// XM_005271079 /// XM_005271080 /// XM_005271081 /// XM_005271082 /// XM_006710795 /// XM_006710796 /// XM_006710797 /// XM_006710798 /// XM_006710799 /// XM_006710800 /// XM_006710801 </td> <td> 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from mutant phenotype /// 1900121 // negative regulation of receptor binding // inferred from mutant phenotype </td> <td> 0005887 // integral component of plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from mutant phenotype /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation </td> <td> 4.05 </td> <td> 207.53 </td> <td> 0.12 </td> <td> 0.91 </td> <td> 0.93 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211858_x_at </td> <td> 211858_x_at </td> <td> AF088184 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF088184.1 /DEF=Homo sapiens guanine nucleotide-binding protein Gs alpha subunit isoform L2 mRNA, complete cds.  /FEA=CDS /PROD=guanine nucleotide-binding protein Gs alphasubunit isoform L2 /DB_XREF=gi:3552031 /UG=Hs.273385 guanine nucleotide binding protein (G protein), alpha stimulating activity polypeptide 1 /FL=gb:AF088184.1 </td> <td> AF088184 </td> <td> GNAS complex locus </td> <td> GNAS </td> <td> 2778 </td> <td> NM_000516 /// NM_001077488 /// NM_001077489 /// NM_001077490 /// NM_016592 /// NM_080425 /// NM_080426 /// NR_003259 /// XM_005260401 /// XM_005260402 /// XM_006723781 /// XM_006723782 </td> <td> 0001501 // skeletal system development // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // not recorded /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007565 // female pregnancy // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007606 // sensory perception of chemical stimulus // not recorded /// 0007608 // sensory perception of smell // traceable author statement /// 0009306 // protein secretion // non-traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040015 // negative regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040032 // post-embryonic body morphogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043950 // positive regulation of cAMP-mediated signaling // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0046907 // intracellular transport // non-traceable author statement /// 0048589 // developmental growth // inferred from direct assay /// 0048589 // developmental growth // inferred from mutant phenotype /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050890 // cognition // inferred from direct assay /// 0050890 // cognition // inferred from mutant phenotype /// 0051216 // cartilage development // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060348 // bone development // inferred from direct assay /// 0060348 // bone development // inferred from mutant phenotype /// 0060789 // hair follicle placode formation // inferred from direct assay /// 0060789 // hair follicle placode formation // inferred from mutant phenotype /// 0070527 // platelet aggregation // inferred from direct assay /// 0070527 // platelet aggregation // inferred from mutant phenotype /// 0071107 // response to parathyroid hormone // inferred from mutant phenotype /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071514 // genetic imprinting // inferred from electronic annotation /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity /// 0071880 // adenylate cyclase-activating adrenergic receptor signaling pathway // inferred from direct assay </td> <td> 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from sequence or structural similarity /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031224 // intrinsic component of membrane // inferred from direct assay /// 0031234 // extrinsic component of cytoplasmic side of plasma membrane // not recorded /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004016 // adenylate cyclase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from direct assay /// 0005159 // insulin-like growth factor receptor binding //  /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0031698 // beta-2 adrenergic receptor binding //  /// 0031748 // D1 dopamine receptor binding //  /// 0031852 // mu-type opioid receptor binding // not recorded /// 0035255 // ionotropic glutamate receptor binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051430 // corticotropin-releasing hormone receptor 1 binding // </td> <td> -39.35 </td> <td> 1650.35 </td> <td> -0.12 </td> <td> 0.91 </td> <td> 0.93 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208120_x_at </td> <td> 208120_x_at </td> <td> NM_031221 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_031221.1 /DEF=Homo sapiens hypothetical protein FKSG63 (FKSG63), mRNA. /FEA=mRNA /GEN=FKSG63 /PROD=hypothetical protein FKSG63 /DB_XREF=gi:13654297 /FL=gb:NM_031221.1 </td> <td> NM_031221 </td> <td> FKSG49 </td> <td> FKSG49 </td> <td> 400949 </td> <td> XR_041698 </td> <td>  </td> <td>  </td> <td>  </td> <td> -4.77 </td> <td> 213.11 </td> <td> -0.12 </td> <td> 0.91 </td> <td> 0.93 </td> <td> -4.62 </td> </tr>
  <tr> <td> 207668_x_at </td> <td> 207668_x_at </td> <td> NM_005742 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005742.1 /DEF=Homo sapiens protein disulfide isomerase-related protein (P5), mRNA.  /FEA=mRNA /GEN=P5 /PROD=protein disulfide isomerase-related protein /DB_XREF=gi:5031972 /UG=Hs.182429 protein disulfide isomerase-related protein /FL=gb:D49489.1 gb:NM_005742.1 </td> <td> NM_005742 </td> <td> protein disulfide isomerase family A, member 6 </td> <td> PDIA6 </td> <td> 10130 </td> <td> NM_001282704 /// NM_001282705 /// NM_001282706 /// NM_001282707 /// NM_005742 /// XM_005246145 /// XM_006711856 </td> <td> 0006457 // protein folding // not recorded /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from mutant phenotype /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0033572 // transferrin transport // traceable author statement /// 0034976 // response to endoplasmic reticulum stress // not recorded /// 0043277 // apoptotic cell clearance // not recorded /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // not recorded /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003756 // protein disulfide isomerase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from direct assay </td> <td> -28.00 </td> <td> 1516.72 </td> <td> -0.12 </td> <td> 0.91 </td> <td> 0.93 </td> <td> -4.62 </td> </tr>
  <tr> <td> 207168_s_at </td> <td> 207168_s_at </td> <td> NM_004893 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004893.1 /DEF=Homo sapiens H2A histone family, member Y (H2AFY), mRNA. /FEA=mRNA /GEN=H2AFY /PROD=H2A histone family, member Y /DB_XREF=gi:4758495 /UG=Hs.75258 H2A histone family, member Y /FL=gb:AF054174.1 gb:NM_004893.1 </td> <td> NM_004893 </td> <td> H2A histone family, member Y </td> <td> H2AFY </td> <td> 9555 </td> <td> NM_001040158 /// NM_004893 /// NM_138609 /// NM_138610 /// XM_005272132 /// XM_005272134 /// XM_005272135 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001558 // regulation of cell growth // inferred from genetic interaction /// 0006334 // nucleosome assembly // non-traceable author statement /// 0007549 // dosage compensation // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0033128 // negative regulation of histone phosphorylation // inferred from mutant phenotype /// 0045814 // negative regulation of gene expression, epigenetic // inferred from mutant phenotype /// 0061187 // regulation of chromatin silencing at rDNA // inferred from mutant phenotype /// 0071169 // establishment of protein localization to chromatin // inferred from mutant phenotype /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from mutant phenotype /// 1901837 // negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter // inferred from genetic interaction /// 1901837 // negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter // inferred from mutant phenotype /// 1902750 // negative regulation of cell cycle G2/M phase transition // inferred from mutant phenotype </td> <td> 0000786 // nucleosome // non-traceable author statement /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000793 // condensed chromosome // inferred from electronic annotation /// 0001739 // sex chromatin // traceable author statement /// 0001740 // Barr body // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000182 // rDNA binding // inferred from direct assay /// 0003677 // DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0010385 // double-stranded methylated DNA binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030291 // protein serine/threonine kinase inhibitor activity // inferred from mutant phenotype /// 0031490 // chromatin DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation </td> <td> 3.98 </td> <td> 517.66 </td> <td> 0.12 </td> <td> 0.91 </td> <td> 0.93 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210686_x_at </td> <td> 210686_x_at </td> <td> BC001407 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001407.1 /DEF=Homo sapiens, Similar to cytochrome c-like antigen, clone MGC:2960, mRNA, complete cds.  /FEA=mRNA /PROD=Similar to cytochrome c-like antigen /DB_XREF=gi:12655110 /UG=Hs.253070 Homo sapiens, Similar to cytochrome c-like antigen, clone MGC:2960, mRNA, complete cds /FL=gb:BC001407.1 </td> <td> BC001407 </td> <td> solute carrier family 25 (mitochondrial carrier), member 16 </td> <td> SLC25A16 </td> <td> 8034 </td> <td> NM_152707 /// XM_005270183 /// XM_006717987 </td> <td> 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // non-traceable author statement /// 0009108 // coenzyme biosynthetic process // traceable author statement /// 0015939 // pantothenate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0015297 // antiporter activity // non-traceable author statement </td> <td> -4.20 </td> <td> 193.97 </td> <td> -0.11 </td> <td> 0.91 </td> <td> 0.93 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200601_at </td> <td> 200601_at </td> <td> U48734 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:U48734.1 /DEF=Human non-muscle alpha-actinin mRNA, complete cds. /FEA=mRNA /PROD=alpha actinin /DB_XREF=gi:3157975 /UG=Hs.182485 actinin, alpha 4 /FL=gb:NM_004924.2 gb:BC005033.1 gb:D89980.1 gb:U48734.1 </td> <td> U48734 </td> <td> actinin, alpha 4 </td> <td> ACTN4 </td> <td> 81 </td> <td> NM_004924 /// XM_005259281 /// XM_005259282 /// XM_006723406 </td> <td> 0001666 // response to hypoxia // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0032417 // positive regulation of sodium:proton antiporter activity // non-traceable author statement /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0048549 // positive regulation of pinocytosis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051271 // negative regulation of cellular component movement // inferred from electronic annotation /// 0051272 // positive regulation of cellular component movement // inferred from direct assay /// 0051272 // positive regulation of cellular component movement // inferred from mutant phenotype /// 0051764 // actin crosslink formation // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from electronic annotation </td> <td> 0001725 // stress fiber // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031143 // pseudopodium // traceable author statement /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0001882 // nucleoside binding // inferred from direct assay /// 0003779 // actin binding // traceable author statement /// 0005178 // integrin binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay </td> <td> 11.25 </td> <td> 540.45 </td> <td> 0.11 </td> <td> 0.91 </td> <td> 0.93 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201876_at </td> <td> 201876_at </td> <td> NM_000305 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_000305.1 /DEF=Homo sapiens paraoxonase 2 (PON2), mRNA. /FEA=mRNA /GEN=PON2 /PROD=paraoxonase 2 /DB_XREF=gi:4505952 /UG=Hs.169857 paraoxonase 2 /FL=gb:L48513.1 gb:AF001601.1 gb:NM_000305.1 </td> <td> NM_000305 </td> <td> paraoxonase 2 </td> <td> PON2 </td> <td> 5445 </td> <td> NM_000305 /// NM_001018161 /// XM_005250453 /// XM_005250454 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0019439 // aromatic compound catabolic process // inferred from direct assay </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation </td> <td> 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004064 // arylesterase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -4.25 </td> <td> 521.20 </td> <td> -0.11 </td> <td> 0.91 </td> <td> 0.93 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212595_s_at </td> <td> 212595_s_at </td> <td> AL534321 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL534321 /FEA=EST /DB_XREF=gi:12797814 /DB_XREF=est:AL534321 /CLONE=CS0DF004YB03 (5 prime) /UG=Hs.75416 DAZ associated protein 2 </td> <td> AL534321 </td> <td> DAZ associated protein 2 </td> <td> DAZAP2 </td> <td> 9802 </td> <td> NM_001136264 /// NM_001136266 /// NM_001136267 /// NM_001136268 /// NM_001136269 /// NM_014764 </td> <td>  </td> <td> 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0050699 // WW domain binding // inferred from physical interaction </td> <td> 6.27 </td> <td> 437.59 </td> <td> 0.11 </td> <td> 0.92 </td> <td> 0.93 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200613_at </td> <td> 200613_at </td> <td> NM_004068 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_004068.1 /DEF=Homo sapiens adaptor-related protein complex 2, mu 1 subunit (AP2M1), mRNA.  /FEA=mRNA /GEN=AP2M1 /PROD=adaptor-related protein complex 2, mu 1 subunit /DB_XREF=gi:4757993 /UG=Hs.152936 adaptor-related protein complex 2, mu 1 subunit /FL=gb:U36188.1 gb:BC004996.1 gb:D63475.1 gb:NM_004068.1 </td> <td> NM_004068 </td> <td> adaptor-related protein complex 2, mu 1 subunit </td> <td> AP2M1 </td> <td> 1173 </td> <td> NM_001025205 /// NM_004068 </td> <td> 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral process // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // neurotrophin TRK receptor signaling pathway // traceable author statement /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0061024 // membrane organization // traceable author statement </td> <td> 0005739 // mitochondrion // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation </td> <td> 5.75 </td> <td> 629.70 </td> <td> 0.11 </td> <td> 0.92 </td> <td> 0.93 </td> <td> -4.62 </td> </tr>
  <tr> <td> 200680_x_at </td> <td> 200680_x_at </td> <td> NM_002128 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002128.1 /DEF=Homo sapiens high-mobility group (nonhistone chromosomal) protein 1 (HMG1), mRNA.  /FEA=mRNA /GEN=HMG1 /PROD=high-mobility group (nonhistone chromosomal)protein 1 /DB_XREF=gi:4504424 /UG=Hs.274472 high-mobility group (nonhistone chromosomal) protein 1 /FL=gb:BC003378.1 gb:NM_002128.1 gb:D63874.1 </td> <td> NM_002128 </td> <td> high mobility group box 1 </td> <td> HMGB1 </td> <td> 3146 </td> <td> NM_002128 /// XM_005266363 /// XM_005266365 /// XM_005266368 </td> <td> 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001773 // myeloid dendritic cell activation // inferred from sequence or structural similarity /// 0002407 // dendritic cell chemotaxis // inferred from sequence or structural similarity /// 0002437 // inflammatory response to antigenic stimulus // inferred from expression pattern /// 0006265 // DNA topological change // inferred from sequence or structural similarity /// 0006288 // base-excision repair, DNA ligation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006310 // DNA recombination // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in execution phase of apoptosis // traceable author statement /// 0017055 // negative regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0033151 // V(D)J recombination // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050918 // positive chemotaxis // inferred from sequence or structural similarity /// 0051103 // DNA ligation involved in DNA repair // inferred from sequence or structural similarity /// 2000426 // negative regulation of apoptotic cell clearance // inferred from electronic annotation </td> <td> 0000793 // condensed chromosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from sequence or structural similarity /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008301 // DNA binding, bending // inferred from mutant phenotype /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0042056 // chemoattractant activity // inferred from sequence or structural similarity /// 0044822 // poly(A) RNA binding // inferred from direct assay /// 0050786 // RAGE receptor binding // inferred from sequence or structural similarity /// 0070491 // repressing transcription factor binding // inferred from physical interaction </td> <td> -25.87 </td> <td> 2369.26 </td> <td> -0.11 </td> <td> 0.92 </td> <td> 0.93 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201973_s_at </td> <td> 201973_s_at </td> <td> AL550875 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL550875 /FEA=EST /DB_XREF=gi:12888273 /DB_XREF=est:AL550875 /CLONE=CS0DI065YO01 (5 prime) /UG=Hs.289112 CGI-43 protein /FL=gb:NM_015622.1 gb:AF151801.1 </td> <td> AL550875 </td> <td> CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae) /// CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae) </td> <td> CCZ1 /// CCZ1B </td> <td> 51622 /// 221960 </td> <td> NM_015622 /// NM_198097 </td> <td>  </td> <td> 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation </td> <td>  </td> <td> 3.50 </td> <td> 568.98 </td> <td> 0.10 </td> <td> 0.92 </td> <td> 0.94 </td> <td> -4.62 </td> </tr>
  <tr> <td> 216483_s_at </td> <td> 216483_s_at </td> <td> AC005339 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AC005339 /DEF=Homo sapiens chromosome 19, cosmid R33729 /FEA=CDS /DB_XREF=gi:3355454 /UG=Hs.296443 hypothetical protein R33729_1 </td> <td> AC005339 </td> <td> chromosome 19 open reading frame 10 </td> <td> C19orf10 </td> <td> 56005 </td> <td> NM_019107 </td> <td> 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td>  </td> <td> -3.78 </td> <td> 378.79 </td> <td> -0.10 </td> <td> 0.92 </td> <td> 0.94 </td> <td> -4.62 </td> </tr>
  <tr> <td> 209330_s_at </td> <td> 209330_s_at </td> <td> D55674 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D55674.1 /DEF=Human mRNA for heterogeneous nuclear ribonucleoprotein D (hnRNP D), complete cds, clone cDx9.  /FEA=mRNA /PROD=heterogeneous nuclear ribonucleoprotein D (hnRNPD) /DB_XREF=gi:870748 /UG=Hs.303627 heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA-binding protein 1, 37kD) /FL=gb:BC002401.1 gb:D55674.1 </td> <td> D55674 </td> <td> heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) </td> <td> HNRNPD </td> <td> 3184 </td> <td> NM_001003810 /// NM_002138 /// NM_031369 /// NM_031370 </td> <td> 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // non-traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006401 // RNA catabolic process // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0042752 // regulation of circadian rhythm // inferred from mutant phenotype /// 0043488 // regulation of mRNA stability // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-templated // non-traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0097167 // circadian regulation of translation // inferred from mutant phenotype </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042162 // telomeric DNA binding // inferred from direct assay /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> -3.03 </td> <td> 481.71 </td> <td> -0.10 </td> <td> 0.92 </td> <td> 0.94 </td> <td> -4.62 </td> </tr>
  <tr> <td> 211074_at </td> <td> 211074_at </td> <td> AF000381 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:AF000381.1 /DEF=Homo sapiens non-functional folate binding protein mRNA, complete cds.  /FEA=mRNA /PROD=non-functional folate binding protein /DB_XREF=gi:2565195 /FL=gb:AF000381.1 </td> <td> AF000381 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 6.73 </td> <td> 512.46 </td> <td> 0.10 </td> <td> 0.93 </td> <td> 0.94 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208639_x_at </td> <td> 208639_x_at </td> <td> BC001312 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:BC001312.1 /DEF=Homo sapiens, protein disulfide isomerase-related protein, clone MGC:5517, mRNA, complete cds.  /FEA=mRNA /PROD=protein disulfide isomerase-related protein /DB_XREF=gi:12654930 /UG=Hs.182429 protein disulfide isomerase-related protein /FL=gb:BC001312.1 </td> <td> BC001312 </td> <td> protein disulfide isomerase family A, member 6 </td> <td> PDIA6 </td> <td> 10130 </td> <td> NM_001282704 /// NM_001282705 /// NM_001282706 /// NM_001282707 /// NM_005742 /// XM_005246145 /// XM_006711856 </td> <td> 0006457 // protein folding // not recorded /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0030177 // positive regulation of Wnt signaling pathway // inferred from mutant phenotype /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0033572 // transferrin transport // traceable author statement /// 0034976 // response to endoplasmic reticulum stress // not recorded /// 0043277 // apoptotic cell clearance // not recorded /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0051701 // interaction with host // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0090382 // phagosome maturation // traceable author statement </td> <td> 0005765 // lysosomal membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // not recorded /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0003756 // protein disulfide isomerase activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from direct assay </td> <td> 15.95 </td> <td> 1255.70 </td> <td> 0.09 </td> <td> 0.93 </td> <td> 0.94 </td> <td> -4.62 </td> </tr>
  <tr> <td> 210231_x_at </td> <td> 210231_x_at </td> <td> D45198 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:D45198.1 /DEF=Human mRNA for template acyivating factor-I alpha, complete cds. /FEA=mRNA /GEN=set /PROD=template acyivating factor-I alpha /DB_XREF=gi:971271 /UG=Hs.145279 SET translocation (myeloid leukemia-associated) /FL=gb:D45198.1 </td> <td> D45198 </td> <td> SET nuclear proto-oncogene </td> <td> SET </td> <td> 6418 </td> <td> NM_001122821 /// NM_001248000 /// NM_001248001 /// NM_003011 </td> <td> 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006337 // nucleosome disassembly // traceable author statement /// 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0035067 // negative regulation of histone acetylation // traceable author statement /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0045446 // endothelial cell differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050790 // regulation of catalytic activity // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay </td> <td> 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004864 // protein phosphatase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0042393 // histone binding // traceable author statement </td> <td> 4.23 </td> <td> 532.11 </td> <td> 0.09 </td> <td> 0.93 </td> <td> 0.94 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201769_at </td> <td> 201769_at </td> <td> NM_014666 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014666.1 /DEF=Homo sapiens KIAA0171 gene product (KIAA0171), mRNA. /FEA=mRNA /GEN=KIAA0171 /PROD=KIAA0171 gene product /DB_XREF=gi:7661967 /UG=Hs.155623 KIAA0171 gene product /FL=gb:D79993.1 gb:BC004467.1 gb:NM_014666.1 </td> <td> NM_014666 </td> <td> clathrin interactor 1 </td> <td> CLINT1 </td> <td> 9685 </td> <td> NM_001195555 /// NM_001195556 /// NM_014666 </td> <td> 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0061024 // membrane organization // traceable author statement </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from physical interaction </td> <td> -3.20 </td> <td> 330.95 </td> <td> -0.09 </td> <td> 0.93 </td> <td> 0.95 </td> <td> -4.62 </td> </tr>
  <tr> <td> 206323_x_at </td> <td> 206323_x_at </td> <td> NM_002547 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002547.1 /DEF=Homo sapiens oligophrenin 1 (OPHN1), mRNA. /FEA=mRNA /GEN=OPHN1 /PROD=oligophrenin 1, Rho-GTPase acivating protein /DB_XREF=gi:4505506 /UG=Hs.128824 oligophrenin 1 /FL=gb:NM_002547.1 </td> <td> NM_002547 </td> <td> oligophrenin 1 </td> <td> OPHN1 </td> <td> 4983 </td> <td> NM_002547 /// XM_005262270 /// XM_006724652 /// XM_006724653 </td> <td> 0006897 // endocytosis // inferred from electronic annotation /// 0006930 // substrate-dependent cell migration, cell extension // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048488 // synaptic vesicle endocytosis // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051966 // regulation of synaptic transmission, glutamatergic // inferred from electronic annotation </td> <td> 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043195 // terminal bouton // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation </td> <td> 0003779 // actin binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from direct assay /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation </td> <td> -7.98 </td> <td> 367.26 </td> <td> -0.08 </td> <td> 0.94 </td> <td> 0.95 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217092_x_at </td> <td> 217092_x_at </td> <td> AL031589 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL031589 /DEF=Human DNA sequence from clone RP6-11O7 on chromosome 22 Contains an RPL7 (60S Ribosomal Protein L7) pseudogene, part of a putative novel gene, ESTs and GSSs /FEA=CDS /DB_XREF=gi:4914506 /UG=Hs.247871 Human DNA sequence from clone RP6-11O7 on chromosome 22 Contains an RPL7 (60S Ribosomal Protein L7) pseudogene, part of a putative novel gene, ESTs and GSSs </td> <td> AL031589 </td> <td> /// ribosomal protein L7 pseudogene 52 </td> <td> RP6-11O7.2 /// RPL7P52 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> -7.48 </td> <td> 560.86 </td> <td> -0.08 </td> <td> 0.94 </td> <td> 0.95 </td> <td> -4.62 </td> </tr>
  <tr> <td> 216383_at </td> <td> 216383_at </td> <td> U52111 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:U52111 /DEF=Homo sapiens X28 region near ALD locus containing dual specificity phosphatase 9 (DUSP9), ribosomal protein L18a (RPL18a), Ca2+Calmodulin-dependent protein kinase I (CAMKI), creatine transporter (CRTR), CDM protein (CDM), adrenoleukodystrophy pro... /FEA=mRNA_2 /DB_XREF=gi:8331754 /UG=Hs.283952 Homo sapiens X28 region near ALD locus containing dual specificity phosphatase 9 (DUSP9), ribosomal protein L18a (RPL18a), Ca2+Calmodulin-dependent protein kinase I (CAMKI), creatine transporter (CRTR), CDM protein (CDM), adrenoleukodystrophy protein (AL </td> <td> U52111 </td> <td> ribosomal protein L18a pseudogene 16 /// </td> <td> RPL18AP16 /// RPL18AP16 </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td>  </td> <td> 3.30 </td> <td> 122.20 </td> <td> 0.08 </td> <td> 0.94 </td> <td> 0.95 </td> <td> -4.62 </td> </tr>
  <tr> <td> 203484_at </td> <td> 203484_at </td> <td> NM_014302 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_014302.1 /DEF=Homo sapiens Sec61 gamma (SEC61G), mRNA. /FEA=mRNA /GEN=SEC61G /PROD=Sec61 gamma /DB_XREF=gi:7657545 /UG=Hs.9950 Sec61 gamma /FL=gb:AF054184.1 gb:NM_014302.1 </td> <td> NM_014302 </td> <td> Sec61 gamma subunit </td> <td> SEC61G </td> <td> 23480 </td> <td> NM_001012456 /// NM_014302 </td> <td> 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006412 // translation // traceable author statement /// 0006605 // protein targeting // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045047 // protein targeting to ER // inferred from sequence or structural similarity /// 0071806 // protein transmembrane transport // inferred from electronic annotation </td> <td> 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016021 // integral component of membrane // inferred from electronic annotation </td> <td> 0008565 // protein transporter activity // inferred from sequence or structural similarity /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation </td> <td> -3.95 </td> <td> 784.25 </td> <td> -0.07 </td> <td> 0.94 </td> <td> 0.96 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201031_s_at </td> <td> 201031_s_at </td> <td> NM_005520 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_005520.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein H1 (H) (HNRPH1), mRNA.  /FEA=mRNA /GEN=HNRPH1 /PROD=heterogeneous nuclear ribonucleoprotein H1 (H) /DB_XREF=gi:5031752 /UG=Hs.245710 heterogeneous nuclear ribonucleoprotein H1 (H) /FL=gb:BC001348.1 gb:L22009.1 gb:NM_005520.1 </td> <td> NM_005520 </td> <td> heterogeneous nuclear ribonucleoprotein H1 (H) </td> <td> HNRNPH1 </td> <td> 3187 </td> <td> NM_001257293 /// NM_005520 /// XM_005265895 /// XM_005265896 /// XM_005265901 /// XM_005265902 /// XM_005265903 /// XM_006714862 /// XM_006714863 </td> <td> 0000398 // mRNA splicing, via spliceosome // inferred by curator /// 0000398 // mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0043484 // regulation of RNA splicing // inferred from direct assay </td> <td> 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0019013 // viral nucleocapsid // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008266 // poly(U) RNA binding // traceable author statement /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 5.60 </td> <td> 859.48 </td> <td> 0.07 </td> <td> 0.95 </td> <td> 0.96 </td> <td> -4.62 </td> </tr>
  <tr> <td> 208091_s_at </td> <td> 208091_s_at </td> <td> NM_030796 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_030796.1 /DEF=Homo sapiens hypothetical protein DKFZp564K0822 (DKFZP564K0822), mRNA.  /FEA=mRNA /GEN=DKFZP564K0822 /PROD=hypothetical protein DKFZp564K0822 /DB_XREF=gi:13540577 /FL=gb:NM_030796.1 </td> <td> NM_030796 </td> <td> vesicular, overexpressed in cancer, prosurvival protein 1 </td> <td> VOPP1 </td> <td> 81552 </td> <td> NM_001284282 /// NM_001284283 /// NM_001284284 /// NM_030796 </td> <td> 0006351 // transcription, DNA-templated // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype </td> <td> 0005768 // endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay /// 0031301 // integral component of organelle membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation </td> <td> 0004871 // signal transducer activity // inferred from mutant phenotype </td> <td> -4.35 </td> <td> 490.57 </td> <td> -0.07 </td> <td> 0.95 </td> <td> 0.96 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201400_at </td> <td> 201400_at </td> <td> NM_002795 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_002795.1 /DEF=Homo sapiens proteasome (prosome, macropain) subunit, beta type, 3 (PSMB3), mRNA.  /FEA=mRNA /GEN=PSMB3 /PROD=proteasome (prosome, macropain) subunit, betatype, 3 /DB_XREF=gi:4506196 /UG=Hs.82793 proteasome (prosome, macropain) subunit, beta type, 3 /FL=gb:NM_002795.1 gb:D26598.1 </td> <td> NM_002795 </td> <td> proteasome (prosome, macropain) subunit, beta type, 3 </td> <td> PSMB3 </td> <td> 5691 </td> <td> NM_002795 /// NR_104194 /// NR_104195 </td> <td> 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral process // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation </td> <td> 0000502 // proteasome complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation </td> <td> -4.30 </td> <td> 633.75 </td> <td> -0.07 </td> <td> 0.95 </td> <td> 0.96 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212639_x_at </td> <td> 212639_x_at </td> <td> AL581768 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL581768 /FEA=EST /DB_XREF=gi:12949093 /DB_XREF=est:AL581768 /CLONE=CS0DG007YA06 (3 prime) /UG=Hs.272897 Tubulin, alpha, brain-specific </td> <td> AL581768 </td> <td> tubulin, alpha 1b </td> <td> TUBA1B </td> <td> 10376 </td> <td> NM_006082 </td> <td> 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // traceable author statement /// 0030705 // cytoskeleton-dependent intracellular transport // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051301 // cell division // traceable author statement /// 0071353 // cellular response to interleukin-4 // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0036464 // cytoplasmic ribonucleoprotein granule // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0000166 // nucleotide binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation </td> <td> 24.80 </td> <td> 4807.25 </td> <td> 0.06 </td> <td> 0.95 </td> <td> 0.96 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201262_s_at </td> <td> 201262_s_at </td> <td> NM_001711 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_001711.1 /DEF=Homo sapiens biglycan (BGN), mRNA. /FEA=mRNA /GEN=BGN /PROD=biglycan /DB_XREF=gi:4502402 /UG=Hs.821 biglycan /FL=gb:BC002416.1 gb:BC004244.1 gb:J04599.1 gb:NM_001711.1 </td> <td> NM_001711 </td> <td> biglycan </td> <td> BGN </td> <td> 633 </td> <td> NM_001711 </td> <td> 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0019800 // peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan // inferred from electronic annotation /// 0030198 // extracellular matrix organization // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0030206 // chondroitin sulfate biosynthetic process // traceable author statement /// 0030207 // chondroitin sulfate catabolic process // traceable author statement /// 0030208 // dermatan sulfate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0030133 // transport vesicle // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005515 // protein binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation </td> <td> 3.00 </td> <td> 220.60 </td> <td> 0.06 </td> <td> 0.95 </td> <td> 0.96 </td> <td> -4.62 </td> </tr>
  <tr> <td> 217719_at </td> <td> 217719_at </td> <td> NM_016091 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Exemplar sequence </td> <td> GenBank </td> <td> gb:NM_016091.1 /DEF=Homo sapiens HSPC025 (HSPC025), mRNA. /FEA=mRNA /GEN=HSPC025 /PROD=HSPC025 /DB_XREF=gi:7705432 /UG=Hs.119503 HSPC025 /FL=gb:BC001101.1 gb:AF077207.1 gb:AF083243.1 gb:NM_016091.1 </td> <td> NM_016091 </td> <td> eukaryotic translation initiation factor 3, subunit L </td> <td> EIF3L </td> <td> 51386 </td> <td> NM_001242923 /// NM_016091 /// XM_005261625 /// XM_006724260 </td> <td> 0001731 // formation of translation preinitiation complex // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006446 // regulation of translational initiation // inferred from electronic annotation </td> <td> 0001650 // fibrillar center // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016282 // eukaryotic 43S preinitiation complex // inferred from electronic annotation /// 0033290 // eukaryotic 48S preinitiation complex // inferred from electronic annotation </td> <td> 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044822 // poly(A) RNA binding // inferred from direct assay </td> <td> 3.53 </td> <td> 1349.24 </td> <td> 0.06 </td> <td> 0.96 </td> <td> 0.97 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212038_s_at </td> <td> 212038_s_at </td> <td> AL515918 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AL515918 /FEA=EST /DB_XREF=gi:12779411 /DB_XREF=est:AL515918 /CLONE=CS0DA001YJ18 (3 prime) /UG=Hs.149155 voltage-dependent anion channel 1 </td> <td> AL515918 </td> <td> voltage-dependent anion channel 1 </td> <td> VDAC1 </td> <td> 7416 </td> <td> NM_003374 /// NR_036624 /// NR_036625 /// XM_005272075 </td> <td> 0001662 // behavioral fear response // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007270 // neuron-neuron synaptic transmission // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0016032 // viral process // inferred from electronic annotation /// 0019048 // modulation by virus of host morphology or physiology // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation </td> <td> 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0046930 // pore complex // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0008308 // voltage-gated anion channel activity // inferred from sequence or structural similarity /// 0008308 // voltage-gated anion channel activity // traceable author statement /// 0015288 // porin activity // inferred from electronic annotation </td> <td> 3.88 </td> <td> 709.39 </td> <td> 0.04 </td> <td> 0.97 </td> <td> 0.97 </td> <td> -4.62 </td> </tr>
  <tr> <td> 212426_s_at </td> <td> 212426_s_at </td> <td> BF033313 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:BF033313 /FEA=EST /DB_XREF=gi:10741025 /DB_XREF=est:601458002F1 /CLONE=IMAGE:3861457 /UG=Hs.74405 tyrosine 3-monooxygenasetryptophan 5-monooxygenase activation protein, theta polypeptide </td> <td> BF033313 </td> <td> tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta </td> <td> YWHAQ </td> <td> 10971 </td> <td> NM_006826 </td> <td> 0006605 // protein targeting // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from expression pattern /// 0045892 // negative regulation of transcription, DNA-templated // inferred from direct assay /// 0061024 // membrane organization // traceable author statement /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement /// 1900740 // positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway // traceable author statement </td> <td> 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0043234 // protein complex // inferred from physical interaction /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction </td> <td> 8.00 </td> <td> 1201.45 </td> <td> 0.03 </td> <td> 0.97 </td> <td> 0.98 </td> <td> -4.62 </td> </tr>
  <tr> <td> 201654_s_at </td> <td> 201654_s_at </td> <td> AI991033 </td> <td>  </td> <td> Homo sapiens </td> <td> Oct 6, 2014 </td> <td> Consensus sequence </td> <td> GenBank </td> <td> Consensus includes gb:AI991033 /FEA=EST /DB_XREF=gi:5837930 /DB_XREF=est:wu36a08.x1 /CLONE=IMAGE:2522102 /UG=Hs.211573 heparan sulfate proteoglycan 2 (perlecan) /FL=gb:M85289.1 gb:NM_005529.2 </td> <td> AI991033 </td> <td> heparan sulfate proteoglycan 2 </td> <td> HSPG2 </td> <td> 3339 </td> <td> NM_001291860 /// NM_005529 /// XM_005245863 /// XM_006710594 /// XM_006710595 /// XM_006710596 /// XM_006710597 /// XM_006710598 </td> <td> 0001523 // retinoid metabolic process // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006027 // glycosaminoglycan catabolic process // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007603 // phototransduction, visible light // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // traceable author statement /// 0030204 // chondroitin sulfate metabolic process // traceable author statement /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048738 // cardiac muscle tissue development // inferred from electronic annotation /// 0060351 // cartilage development involved in endochondral bone morphogenesis // inferred from electronic annotation </td> <td> 0005576 // extracellular region // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005605 // basal lamina // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from direct assay </td> <td> 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation </td> <td> -3.05 </td> <td> 639.27 </td> <td> -0.03 </td> <td> 0.98 </td> <td> 0.98 </td> <td> -4.62 </td> </tr>
   </table>